locus_tag old_locus_tag gene Name start end strand product note type ID NCBI YPZ3_RS00005 YPZ3_0001 YPZ3_RS00005 270 710 - FMN-binding protein MioC An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00005 YPZ3_RS00010 YPZ3_0002 YPZ3_RS00010 803 1264 - transcriptional regulator transcriptional repressor of asnA which codes for aspartate-ammonia ligase gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00010 YPZ3_RS00015 YPZ3_0003 YPZ3_RS00015 1434 2426 + aspartate--ammonia ligase catalyzes the formation of asparagine from aspartate and ammonia gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00015 YPZ3_RS00020 YPZ3_0004 YPZ3_RS00020 2525 3991 - protein ViaA contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00020 YPZ3_RS00025 YPZ3_0005 YPZ3_RS00025 3995 5548 - ATPase RavA interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00025 YPZ3_RS00030 YPZ3_0006 trkD trkD 5822 7690 + low affinity potassium transport system protein kup Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00030 YPZ3_RS00035 YPZ3_0007 YPZ3_RS00035 7895 8314 + D-ribose pyranase cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00035 YPZ3_RS00040 YPZ3_0008 YPZ3_RS00040 8365 9291 + ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00040 YPZ3_RS00045 YPZ3_RS00045 YPZ3_RS00045 9344 9514 + transcriptional regulator gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00045 YPZ3_RS00050 YPZ3_0009 YPZ3_RS00050 9511 10935 - MFS transporter gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00050 YPZ3_RS00055 YPZ3_0010 YPZ3_RS00055 11015 11704 - GntR family transcriptional regulator gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00055 YPZ3_RS00065 YPZ3_r1 YPZ3_RS00065 12261 13809 + 16S ribosomal RNA rRNA gene11 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00065 YPZ3_RS00070 YPZ3_t1 YPZ3_RS00070 13943 14018 + tRNA-Glu tRNA gene12 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00070 YPZ3_RS00075 YPZ3_r2 YPZ3_RS00075 14262 17195 + 23S ribosomal RNA rRNA gene13 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00075 YPZ3_RS00080 YPZ3_r3 YPZ3_RS00080 17287 17402 + 5S ribosomal RNA rRNA gene14 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00080 YPZ3_RS00085 YPZ3_0011 YPZ3_RS00085 17905 19113 + transposase gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00085 YPZ3_RS00090 YPZ3_0012 YPZ3_RS00090 19171 19701 - molybdopterin-guanine dinucleotide biosynthesis protein B in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00090 YPZ3_RS00095 YPZ3_0013 mobA mobA 19701 20288 - molybdenum cofactor guanylyltransferase in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00095 YPZ3_RS00100 YPZ3_RS00100 YPZ3_RS00100 20442 20711 + hypothetical protein gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00100 YPZ3_RS00105 YPZ3_0014 YPZ3_RS00105 20791 21777 + serine/threonine protein kinase catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00105 YPZ3_RS00110 YPZ3_0015 YPZ3_RS00110 21805 22428 + thiol:disulfide interchange protein DsbA gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00110 YPZ3_RS00115 YPZ3_0016 YPZ3_RS00115 22920 25718 + DNA polymerase I has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00115 YPZ3_RS00120 YPZ3_RS00120 YPZ3_RS00120 25982 26137 + invasin gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00120 YPZ3_RS00125 YPZ3_0017 YPZ3_RS00125 26127 26585 + transposase gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00125 YPZ3_RS00130 YPZ3_0018 YPZ3_RS00130 26837 27487 - GTP-binding protein gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00130 YPZ3_RS00135 YPZ3_0019 YPZ3_RS00135 28232 28798 + der GTPase-activating protein YihI gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00135 YPZ3_RS00140 YPZ3_0020 YPZ3_RS00140 28981 30354 + coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00140 YPZ3_RS00145 YPZ3_0021 glnG glnG 30408 31820 - nitrogen regulation protein NR(I) response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00145 YPZ3_RS00150 YPZ3_0022 glnL glnL 31828 32877 - PAS domain-containing two-component system sensor histidine kinase sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00150 YPZ3_RS00155 YPZ3_0023 glnA glnA 33130 34539 - glutamine synthetase forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00155 YPZ3_RS00160 YPZ3_RS00160 YPZ3_RS00160 34725 34856 - membrane protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00160 YPZ3_RS00165 YPZ3_0024 YPZ3_RS00165 35101 36924 + GTP-binding protein gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00165 YPZ3_RS00170 YPZ3_0025 YPZ3_RS00170 37246 37836 + phosphatase gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00170 YPZ3_RS00175 YPZ3_0026 YPZ3_RS00175 37933 38817 + membrane protein gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00175 YPZ3_RS00180 YPZ3_0027 YPZ3_RS00180 38824 39261 + D-aminoacyl-tRNA deacylase hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00180 YPZ3_RS00185 YPZ3_0028 YPZ3_RS00185 39335 40114 - transposase gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00185 YPZ3_RS00190 YPZ3_0029 YPZ3_RS00190 40114 41136 - transposase gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00190 YPZ3_RS00195 YPZ3_0030 YPZ3_RS00195 41406 42329 + hypothetical protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00195 YPZ3_RS00200 YPZ3_0031 YPZ3_RS00200 42464 44173 - hypothetical protein gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00200 YPZ3_RS00205 YPZ3_0032 YPZ3_RS00205 44321 45706 - xanthine permease high-affinity transporter for xanthine gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00205 YPZ3_RS00210 YPZ3_0033 YPZ3_RS00210 45944 47158 + sodium/glutamate symport carrier protein GltS is involved with the sodium-dependent uptake of glutamate gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00210 YPZ3_RS00215 YPZ3_0034 YPZ3_RS00215 47524 49605 - ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00215 YPZ3_RS00220 YPZ3_0035 YPZ3_RS00220 49606 50265 - tRNA methyltransferase specifically modifies tRNA at position G18 gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00220 YPZ3_RS00225 YPZ3_0036 YPZ3_RS00225 50304 52412 - bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00225 YPZ3_RS00230 YPZ3_RS00230 rpoZ rpoZ 52432 52707 - DNA-directed RNA polymerase subunit omega Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00230 YPZ3_RS00235 YPZ3_0037 YPZ3_RS00235 52762 53385 - guanylate kinase gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00235 YPZ3_RS00240 YPZ3_0038 ligB ligB 53786 55489 + DNA ligase B this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+ gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00240 YPZ3_RS00245 YPZ3_0039 YPZ3_RS00245 55502 56125 - membrane protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00245 YPZ3_RS00250 YPZ3_0040 YPZ3_RS00250 56528 57391 - hypothetical protein gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00250 YPZ3_RS00255 YPZ3_0041 rph rph 57518 58234 + ribonuclease PH RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00255 YPZ3_RS00260 YPZ3_0042 pyrE pyrE 58401 59048 + orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00260 YPZ3_RS00265 YPZ3_0043 slmA slmA 59183 59779 - nucleoid occlusion factor SlmA FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00265 YPZ3_RS00270 YPZ3_0044 YPZ3_RS00270 59901 60359 - deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00270 YPZ3_RS00275 YPZ3_0045 YPZ3_RS00275 60337 61554 - phosphopantothenoylcysteine decarboxylase catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00275 YPZ3_RS00280 YPZ3_0046 YPZ3_RS00280 61748 62416 + DNA repair protein RadC gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00280 YPZ3_RS00285 YPZ3_RS00285 rpmB rpmB 62679 62915 + 50S ribosomal protein L28 required for 70S ribosome assembly gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00285 YPZ3_RS00290 YPZ3_RS00290 rpmG rpmG 62927 63094 + 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00290 YPZ3_RS00295 YPZ3_0047 YPZ3_RS00295 63177 63986 + formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00295 YPZ3_RS00300 YPZ3_0048 YPZ3_RS00300 63992 64471 - phosphopantetheine adenylyltransferase gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00300 YPZ3_RS00305 YPZ3_0049 YPZ3_RS00305 64468 65250 - LPS biosynthesis protein gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00305 YPZ3_RS00310 YPZ3_0050 YPZ3_RS00310 65251 66528 - 3-deoxy-D-manno-octulosonic acid transferase catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00310 YPZ3_RS00315 YPZ3_0051 YPZ3_RS00315 66948 67913 - ADP-heptose--LPS heptosyl transferase gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00315 YPZ3_RS00320 YPZ3_0052 YPZ3_RS00320 67913 68977 - ADP-heptose--LPS heptosyl transferase catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00320 YPZ3_RS00325 YPZ3_0053 rfaD rfaD 69008 69940 - ADP-L-glycero-D-manno-heptose-6-epimerase catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00325 YPZ3_RS00330 YPZ3_0054 YPZ3_RS00330 70186 71397 + 2-amino-3-ketobutyrate CoA ligase catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00330 YPZ3_RS00335 YPZ3_0055 tdh tdh 71407 72432 + L-threonine 3-dehydrogenase converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00335 YPZ3_RS00340 YPZ3_RS00340 YPZ3_RS00340 72570 73504 - sugar deacetylase gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00340 YPZ3_RS00345 YPZ3_0058 YPZ3_RS00345 73528 74898 - peptidase M37 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00345 YPZ3_RS00350 YPZ3_0059 YPZ3_RS00350 74908 76455 - 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00350 YPZ3_RS00355 YPZ3_0060 YPZ3_RS00355 76852 77286 + hypothetical protein gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00355 YPZ3_RS00360 YPZ3_RS00360 YPZ3_RS00360 77405 77653 + glutaredoxin gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00360 YPZ3_RS00365 YPZ3_0061 YPZ3_RS00365 77741 78217 + protein-export protein SecB molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00365 YPZ3_RS00370 YPZ3_0062 YPZ3_RS00370 78217 79236 + glycerol-3-phosphate dehydrogenase [NAD(P)+] gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00370 YPZ3_RS00375 YPZ3_RS00375 YPZ3_RS00375 79296 79436 + hypothetical protein gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00375 YPZ3_RS00380 YPZ3_0063 cysE cysE 79502 80323 + serine acetyltransferase catalyzes the O-acetylation of serine gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00380 YPZ3_RS00385 YPZ3_0064 YPZ3_RS00385 80446 80934 - tRNA (cytidine(34)-2'-O)-methyltransferase member of the SPOUT superfamily of RNA methyltransferases gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00385 YPZ3_RS00390 YPZ3_0065 YPZ3_RS00390 81123 82187 + O6-methylguanine-DNA methyltransferase regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00390 YPZ3_RS00395 YPZ3_0066 cpxA cpxA 82236 83612 - two-component system sensor histidine kinase part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00395 YPZ3_RS00400 YPZ3_0067 YPZ3_RS00400 83609 84307 - two-component system response regulator response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00400 YPZ3_RS00405 YPZ3_0068 cpxP cpxP 84481 84969 + universal stress protein repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00405 YPZ3_RS00410 YPZ3_0069 YPZ3_RS00410 85647 86606 + hypothetical protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00410 YPZ3_RS00415 YPZ3_0070 fieF fieF 87168 88070 + cation-efflux pump FieF member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00415 YPZ3_RS00420 YPZ3_0071 YPZ3_RS00420 88288 89271 + ATP-dependent 6-phosphofructokinase catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00420 YPZ3_RS00425 YPZ3_0072 YPZ3_RS00425 89492 90481 + sulfate transporter subunit gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00425 YPZ3_RS00430 YPZ3_0073 YPZ3_RS00430 90731 91390 - molybdenum ABC transporter substrate-binding protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00430 YPZ3_RS00435 YPZ3_0074 YPZ3_RS00435 91625 93052 - membrane protein gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00435 YPZ3_RS00440 YPZ3_0075 YPZ3_RS00440 93118 93831 - hypothetical protein gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00440 YPZ3_RS00445 YPZ3_0076 YPZ3_RS00445 93828 94565 - GlcNAc-PI de-N-acetylase gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00445 YPZ3_RS00450 YPZ3_0077 YPZ3_RS00450 94702 95937 + LysR family transcriptional regulator gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00450 YPZ3_RS00455 YPZ3_0078 YPZ3_RS00455 96169 96936 - triosephosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00455 YPZ3_RS00460 YPZ3_0079 YPZ3_RS00460 97065 97700 - hypothetical protein gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00460 YPZ3_RS00465 YPZ3_0080 YPZ3_RS00465 97848 98282 + membrane protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00465 YPZ3_RS00470 YPZ3_0081 YPZ3_RS00470 98623 99369 - ferredoxin-NADP reductase gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00470 YPZ3_RS00475 YPZ3_0082 YPZ3_RS00475 99524 100534 - fructose 1%2C6-bisphosphatase gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00475 YPZ3_RS00480 YPZ3_0083 glpK glpK 100771 102294 - glycerol kinase Converts glycerol and ADP to glycerol-3-phosphate and ADP gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00480 YPZ3_RS00485 YPZ3_0084 YPZ3_RS00485 102471 103319 - glycerol uptake facilitator protein involved in the transport of glycerol into the cell gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00485 YPZ3_RS00490 YPZ3_RS00490 YPZ3_RS00490 103329 103568 - hypothetical protein gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00490 YPZ3_RS00495 YPZ3_RS00495 YPZ3_RS00495 103947 104186 + cell division protein ZapB interacts with FisZ and is necessary for Z-ring formation gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00495 YPZ3_RS00500 YPZ3_0085 YPZ3_RS00500 104394 104852 - transposase gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00500 YPZ3_RS00505 YPZ3_0086 YPZ3_RS00505 105237 107351 - ABC transporter permease gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00505 YPZ3_RS00510 YPZ3_0087 YPZ3_RS00510 107344 108636 - colicin V secretion protein CvaA gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00510 YPZ3_RS00515 YPZ3_RS00515 YPZ3_RS00515 108849 109088 + hypothetical protein gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00515 YPZ3_RS00520 YPZ3_RS00520 YPZ3_RS00520 109263 109412 + membrane protein gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00520 YPZ3_RS00525 YPZ3_0088 YPZ3_RS00525 109718 110302 + hypothetical protein gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00525 YPZ3_RS00530 YPZ3_0089 YPZ3_RS00530 110419 110904 - regulator of ribonuclease activity A regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00530 YPZ3_RS00535 YPZ3_0090 YPZ3_RS00535 111046 111963 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00535 YPZ3_RS00540 YPZ3_0091 hslU hslU 112199 113530 - ATP-dependent protease ATPase subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00540 YPZ3_RS00545 YPZ3_0092 YPZ3_RS00545 113601 114125 - ATP-dependent protease subunit HslV heat shock protein involved in degradation of misfolded proteins gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00545 YPZ3_RS00550 YPZ3_0093 YPZ3_RS00550 114225 115070 - cell division protein FtsN gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00550 YPZ3_RS00555 YPZ3_0094 YPZ3_RS00555 115136 116164 - transcriptional regulator gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00555 YPZ3_RS00560 YPZ3_RS00560 YPZ3_RS00560 116287 116430 - primosome assembly protein PriA gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00560 YPZ3_RS00565 YPZ3_0095 YPZ3_RS00565 116517 118715 - primosome assembly protein PriA binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00565 YPZ3_RS00570 YPZ3_RS00570 rpmE rpmE 118958 119173 + 50S ribosomal protein L31 RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00570 YPZ3_RS00575 YPZ3_0096 YPZ3_RS00575 119716 120171 - hypothetical protein gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00575 YPZ3_RS00580 YPZ3_RS00580 YPZ3_RS00580 120222 120383 + hypothetical protein gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00580 YPZ3_RS00585 YPZ3_0097 YPZ3_RS00585 120520 120837 - met repressor when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00585 YPZ3_RS00590 YPZ3_0098 YPZ3_RS00590 121215 122374 + cystathionine gamma-synthase catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00590 YPZ3_RS00595 YPZ3_0099 metL metL 122377 124812 + bifunctional aspartate kinase II/homoserine dehydrogenase II multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00595 YPZ3_RS00600 YPZ3_0100 metF metF 125045 125929 + 5%2C10-methylenetetrahydrofolate reductase MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00600 YPZ3_RS00605 YPZ3_0101 YPZ3_RS00605 126107 126892 - integrase gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00605 YPZ3_RS00610 YPZ3_RS00610 YPZ3_RS00610 126946 127461 - transposase gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00610 YPZ3_RS00615 YPZ3_0103 YPZ3_RS00615 127654 128412 - transcriptional regulator represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00615 YPZ3_RS00620 YPZ3_0104 YPZ3_RS00620 128447 129283 - rhomboid protease GlpG protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00620 YPZ3_RS00625 YPZ3_0105 glpE glpE 129301 129630 - thiosulfate sulfurtransferase GlpE belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00625 YPZ3_RS00630 YPZ3_0106 YPZ3_RS00630 130005 132716 - transcriptional regulator Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00630 YPZ3_RS00635 YPZ3_0107 YPZ3_RS00635 133034 133384 + glycogen/starch/alpha-glucan phosphorylase gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00635 YPZ3_RS00640 YPZ3_0108 YPZ3_RS00640 133414 135438 + maltodextrin phosphorylase gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00640 YPZ3_RS00645 YPZ3_0109 malQ malQ 135451 137547 + 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00645 YPZ3_RS00650 YPZ3_0110 YPZ3_RS00650 137876 138451 - fe/S biogenesis protein nfuA cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00650 YPZ3_RS00655 YPZ3_0111 YPZ3_RS00655 138511 139212 - competence protein ComF gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00655 YPZ3_RS00660 YPZ3_0112 YPZ3_RS00660 139299 140075 + pimeloyl-[acyl-carrier protein] methyl ester esterase Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00660 YPZ3_RS00665 YPZ3_RS00665 YPZ3_RS00665 140245 140514 + hypothetical protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00665 YPZ3_RS00670 YPZ3_RS00670 YPZ3_RS00670 140652 140909 - ferrous iron transporter C regulatory protein that controls transcription of feoABC genes gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00670 YPZ3_RS00675 YPZ3_0113 feoB feoB 140945 143260 - iron transporter cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00675 YPZ3_RS00680 YPZ3_RS00680 YPZ3_RS00680 143352 143579 - iron transporter gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00680 YPZ3_RS00685 YPZ3_RS00685 YPZ3_RS00685 143574 143720 + hypothetical protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00685 YPZ3_RS00690 YPZ3_0114 YPZ3_RS00690 144103 146478 - transcription accessory protein gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00690 YPZ3_RS00695 YPZ3_0115 YPZ3_RS00695 147012 147527 + transcription elongation factor GreB gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00695 YPZ3_RS00700 YPZ3_0116 ompR ompR 147663 148382 + two-component system response regulator part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00700 YPZ3_RS00705 YPZ3_0117 envZ envZ 148379 149731 + two-component system sensor histidine kinase membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00705 YPZ3_RS00710 YPZ3_0118 YPZ3_RS00710 149866 151485 - phosphoenolpyruvate carboxykinase [ATP] PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00710 YPZ3_RS00715 YPZ3_0119 hslO hslO 151682 152563 - molecular chaperone Hsp33 becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00715 YPZ3_RS00720 YPZ3_0120 YPZ3_RS00720 152726 153133 - heat-shock protein Hsp15 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00720 YPZ3_RS00725 YPZ3_0121 YPZ3_RS00725 153162 153842 - nucleotidase gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00725 YPZ3_RS00730 YPZ3_0122 YPZ3_RS00730 153986 156133 - intracellular growth attenuator protein IgaA gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00730 YPZ3_RS00735 YPZ3_RS00735 YPZ3_RS00735 156413 156607 + hypothetical protein gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00735 YPZ3_RS00740 YPZ3_0123 nudE nudE 156720 157265 + ADP-ribose diphosphatase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00740 YPZ3_RS00745 YPZ3_0124 mrcA mrcA 157401 159956 - penicillin-binding protein 1A bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00745 YPZ3_RS00750 YPZ3_0125 YPZ3_RS00750 160076 160972 + pilus assembly protein HofM gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00750 YPZ3_RS00755 YPZ3_0126 YPZ3_RS00755 160972 161577 + pilus assembly protein PilN gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00755 YPZ3_RS00760 YPZ3_RS00760 YPZ3_RS00760 161570 162151 + membrane protein gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00760 YPZ3_RS00765 YPZ3_RS00765 YPZ3_RS00765 162186 162545 + membrane protein gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00765 YPZ3_RS00770 YPZ3_0128 YPZ3_RS00770 162548 162937 - hypothetical protein gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00770 YPZ3_RS00775 YPZ3_0129 hofQ hofQ 162972 164096 + porin outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00775 YPZ3_RS00780 YPZ3_0130 aroK aroK 164445 164966 + shikimate kinase type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00780 YPZ3_RS00785 YPZ3_0131 aroB aroB 165023 166111 + 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00785 YPZ3_RS00790 YPZ3_0132 YPZ3_RS00790 166365 167354 + hypothetical protein gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00790 YPZ3_RS00795 YPZ3_0133 YPZ3_RS00795 167438 168253 + DNA adenine methylase gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00795 YPZ3_RS00800 YPZ3_0134 YPZ3_RS00800 168556 169233 + ribulose-phosphate 3-epimerase gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00800 YPZ3_RS00805 YPZ3_0135 YPZ3_RS00805 169226 169924 + phosphoglycolate phosphatase catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00805 YPZ3_RS00810 YPZ3_0136 YPZ3_RS00810 169926 170966 + tryptophanyl-tRNA synthetase gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00810 YPZ3_RS00815 YPZ3_0137 cysG cysG 171121 172533 - siroheme synthase 2 multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00815 YPZ3_RS00820 YPZ3_0138 YPZ3_RS00820 172621 173427 - nitrite transporter NirC member of the FNT family of formate and nitrite transporters gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00820 YPZ3_RS00825 YPZ3_0139 nirD nirD 173630 173956 - nitrite reductase small subunit involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00825 YPZ3_RS00830 YPZ3_0140 YPZ3_RS00830 173953 176499 - nitrite reductase subunit NirD gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00830 YPZ3_RS00835 YPZ3_0141 YPZ3_RS00835 176821 178119 + cytosine deaminase Catalyzes the deamination of cytosine to uracil and ammonia gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00835 YPZ3_RS00840 YPZ3_0142 YPZ3_RS00840 178204 179388 - protein TsgA gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00840 YPZ3_RS00845 YPZ3_0143 YPZ3_RS00845 179874 181934 + TonB-dependent receptor gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00845 YPZ3_RS00850 YPZ3_0144 YPZ3_RS00850 182035 183021 - LacI family transcriptional regulator gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00850 YPZ3_RS00855 YPZ3_0145 YPZ3_RS00855 183270 184583 - glycosyl hydrolase catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00855 YPZ3_RS00860 YPZ3_0146 YPZ3_RS00860 185099 185668 + peptidyl-prolyl cis-trans isomerase gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00860 YPZ3_RS00865 YPZ3_0147 YPZ3_RS00865 185994 187535 + hypothetical protein gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00865 YPZ3_RS00870 YPZ3_0148 YPZ3_RS00870 187778 188353 + anthranilate synthase subunit II TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00870 YPZ3_RS00875 YPZ3_0149 argD argD 188486 189703 + acetylornithine aminotransferase DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00875 YPZ3_RS00880 YPZ3_0150 YPZ3_RS00880 189929 192049 - membrane protein gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00880 YPZ3_RS00885 YPZ3_0151 YPZ3_RS00885 192135 192767 - transcriptional regulator cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00885 YPZ3_RS00890 YPZ3_0152 YPZ3_RS00890 193103 193510 + hypothetical protein gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00890 YPZ3_RS00895 YPZ3_0153 YPZ3_RS00895 193582 194013 + membrane protein gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00895 YPZ3_RS00900 YPZ3_0154 YPZ3_RS00900 194191 195060 - phosphoribulokinase gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00900 YPZ3_RS00905 YPZ3_RS00905 YPZ3_RS00905 195209 195445 - hypothetical protein gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00905 YPZ3_RS00910 YPZ3_0155 YPZ3_RS00910 195442 196422 - hydrolase gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00910 YPZ3_RS00915 YPZ3_0156 YPZ3_RS00915 196524 197126 + alcohol dehydrogenase gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00915 YPZ3_RS00920 YPZ3_0157 tauA tauA 197329 198390 + taurine ABC transporter substrate-binding protein with TauB and TauC is responsible for taurine uptake. gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00920 YPZ3_RS00925 YPZ3_0158 tauB tauB 198399 199166 + taurine import ATP-binding protein TauB Part of the ABC transporter complex tauABC involved in taurine import gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00925 YPZ3_RS00930 YPZ3_0159 YPZ3_RS00930 199163 200017 + taurine ABC transporter permease gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00930 YPZ3_RS00935 YPZ3_0160 tauD tauD 200014 200862 + taurine dioxygenase catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00935 YPZ3_RS00940 YPZ3_0161 YPZ3_RS00940 200875 201855 - glycosyl transferase gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00940 YPZ3_RS00945 YPZ3_0162 YPZ3_RS00945 201948 202937 - glycosyl transferase gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00945 YPZ3_RS00950 YPZ3_RS00950 YPZ3_RS00950 203072 204990 - ABC transporter ATP-binding protein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00950 YPZ3_RS00955 YPZ3_0165 YPZ3_RS00955 205241 205789 + glutathione-regulated potassium-efflux system ancillary protein KefG required for KefB activity gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00955 YPZ3_RS00960 YPZ3_0166 YPZ3_RS00960 205793 207601 + glutathione-regulated potassium-efflux system protein KefB involved in potassium efflux gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00960 YPZ3_RS00965 YPZ3_RS00965 YPZ3_RS00965 207617 207838 + hypothetical protein gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00965 YPZ3_RS00970 YPZ3_0167 YPZ3_RS00970 207933 208520 + FKBP-type peptidyl-prolyl cis-trans isomerase rotamase gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00970 YPZ3_RS00975 YPZ3_RS00975 YPZ3_RS00975 208741 208959 - protein SlyX required for phi X174 lysis gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00975 YPZ3_RS00980 YPZ3_0168 YPZ3_RS00980 209274 210074 + peptidyl-prolyl cis-trans isomerase rotamase gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00980 YPZ3_RS00985 YPZ3_0169 YPZ3_RS00985 210328 211050 + hypothetical protein gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00985 YPZ3_RS00990 YPZ3_0170 YPZ3_RS00990 211050 211445 + sulfurtransferase TusD in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00990 YPZ3_RS00995 YPZ3_0171 YPZ3_RS00995 211445 211810 + protein TusC gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS00995 YPZ3_RS01000 YPZ3_RS01000 YPZ3_RS01000 211830 212117 + protein TusB gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01000 YPZ3_RS01005 YPZ3_0172 YPZ3_RS01005 212255 212629 + 30S ribosomal protein S12 gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01005 YPZ3_RS01010 YPZ3_0173 YPZ3_RS01010 212726 213196 + 30S ribosomal protein S7 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01010 YPZ3_RS01015 YPZ3_0174 fusA fusA 213290 215398 + elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01015 YPZ3_RS01020 YPZ3_0175 tuf tuf 215471 216655 + elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01020 YPZ3_RS01025 YPZ3_0176 YPZ3_RS01025 216858 217316 + transposase gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01025 YPZ3_RS01030 YPZ3_RS01030 YPZ3_RS01030 217504 217698 + bacterioferritin-associated ferredoxin gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01030 YPZ3_RS01035 YPZ3_0177 YPZ3_RS01035 217777 218250 + bacterioferritin iron storage protein gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01035 YPZ3_RS01040 YPZ3_0178 rpsJ rpsJ 218664 218975 + 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01040 YPZ3_RS01045 YPZ3_0179 YPZ3_RS01045 219008 219637 + 50S ribosomal protein L3 gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01045 YPZ3_RS01050 YPZ3_0180 rplD rplD 219654 220259 + 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01050 YPZ3_RS01055 YPZ3_0181 rplW rplW 220256 220558 + 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01055 YPZ3_RS01060 YPZ3_0182 YPZ3_RS01060 220575 221399 + 50S ribosomal protein L2 gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01060 YPZ3_RS01065 YPZ3_0182a YPZ3_RS01065 221414 221692 + 30S ribosomal protein S19 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01065 YPZ3_RS01070 YPZ3_0183 YPZ3_RS01070 221707 222039 + 50S ribosomal protein L22 gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01070 YPZ3_RS01075 YPZ3_0184 YPZ3_RS01075 222057 222755 + 30S ribosomal protein S3 gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01075 YPZ3_RS01080 YPZ3_0185 YPZ3_RS01080 222768 223178 + 50S ribosomal protein L16 gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01080 YPZ3_RS01085 YPZ3_0185a YPZ3_RS01085 223178 223369 + 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01085 YPZ3_RS01090 YPZ3_p1 YPZ3_RS01090 223369 223623 + 30S ribosomal protein S17 gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01090 YPZ3_RS01095 YPZ3_0186 YPZ3_RS01095 223804 224175 + 50S ribosomal protein L14 gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01095 YPZ3_RS01100 YPZ3_0187 rplX rplX 224186 224500 + 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01100 YPZ3_RS01105 YPZ3_0188 YPZ3_RS01105 224515 225054 + 50S ribosomal protein L5 gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01105 YPZ3_RS01110 YPZ3_0189 rpsN rpsN 225068 225373 + 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01110 YPZ3_RS01115 YPZ3_0190 YPZ3_RS01115 225407 225799 + 30S ribosomal protein S8 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01115 YPZ3_RS01120 YPZ3_0191 YPZ3_RS01120 225814 226347 + 50S ribosomal protein L6 gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01120 YPZ3_RS01125 YPZ3_0192 YPZ3_RS01125 226357 226710 + 50S ribosomal protein L18 gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01125 YPZ3_RS01130 YPZ3_0193 YPZ3_RS01130 226725 227228 + 30S ribosomal protein S5 gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01130 YPZ3_RS01135 YPZ3_RS01135 rpmD rpmD 227231 227410 + 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01135 YPZ3_RS01140 YPZ3_0194 YPZ3_RS01140 227414 227848 + 50S ribosomal protein L15 gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01140 YPZ3_RS01145 YPZ3_0195 secY secY 227856 229187 + preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01145 YPZ3_RS01150 YPZ3_RS01150 YPZ3_RS01150 229221 229337 + 50S ribosomal protein L36 gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01150 YPZ3_RS01155 YPZ3_0196 YPZ3_RS01155 229485 229841 + 30S ribosomal protein S13 gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01155 YPZ3_RS01160 YPZ3_0197 YPZ3_RS01160 229858 230247 + 30S ribosomal protein S11 gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01160 YPZ3_RS01165 YPZ3_0198 YPZ3_RS01165 230278 230898 + 30S ribosomal protein S4 gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01165 YPZ3_RS01170 YPZ3_0199 YPZ3_RS01170 230924 231913 + DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01170 YPZ3_RS01175 YPZ3_0200 rplQ rplQ 231954 232343 + 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01175 YPZ3_RS01180 YPZ3_0201 zntR zntR 232790 233215 + Zn(II)-responsive transcriptional regulator mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01180 YPZ3_RS01185 YPZ3_RS01185 YPZ3_RS01185 233303 233503 + hypothetical protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01185 YPZ3_RS01190 YPZ3_0202 mscL mscL 233613 234026 - large-conductance mechanosensitive channel forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01190 YPZ3_RS01195 YPZ3_0203 trkA trkA 234165 235541 - potassium transporter peripheral membrane protein involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01195 YPZ3_RS01200 YPZ3_0204 YPZ3_RS01200 235597 236886 - ribosomal RNA small subunit methyltransferase B catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01200 YPZ3_RS01205 YPZ3_0205 fmt fmt 236980 237927 - methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01205 YPZ3_RS01210 YPZ3_0206 YPZ3_RS01210 237952 238464 - peptide deformylase gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01210 YPZ3_RS01215 YPZ3_0207 YPZ3_RS01215 238599 239720 + DNA processing protein DprA gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01215 YPZ3_RS01220 YPZ3_0208 YPZ3_RS01220 239692 240165 + protein Smg gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01220 YPZ3_RS01225 YPZ3_0209 YPZ3_RS01225 240206 240745 + DNA-binding protein gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01225 YPZ3_RS01230 YPZ3_0210 YPZ3_RS01230 240747 241319 + threonylcarbamoyl-AMP synthase involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01230 YPZ3_RS01235 YPZ3_0211 YPZ3_RS01235 241328 242149 + shikimate dehydrogenase (NADP+) gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01235 YPZ3_RS01240 YPZ3_0212 YPZ3_RS01240 242204 242689 - carbonic anhydrase gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01240 YPZ3_RS01245 YPZ3_0213 YPZ3_RS01245 242801 243580 - transposase gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01245 YPZ3_RS01250 YPZ3_0214 YPZ3_RS01250 243580 244602 - transposase gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01250 YPZ3_RS01255 YPZ3_0215 YPZ3_RS01255 244661 245647 + hydrolase gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01255 YPZ3_RS01260 YPZ3_0216 actP actP 245721 247376 - cation/acetate symporter ActP member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01260 YPZ3_RS01265 YPZ3_0217 YPZ3_RS01265 247373 247684 - membrane protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01265 YPZ3_RS01270 YPZ3_0218 YPZ3_RS01270 247741 249699 - acetyl-CoA synthetase Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01270 YPZ3_RS01275 YPZ3_0219 YPZ3_RS01275 250600 251916 + proton glutamate symport protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01275 YPZ3_RS01280 YPZ3_0220 YPZ3_RS01280 252094 252726 - transcriptional regulator gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01280 YPZ3_RS01285 YPZ3_0221 YPZ3_RS01285 252739 255558 - two-component system sensor histidine kinase/response regulator phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2 gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01285 YPZ3_RS01290 YPZ3_0222 YPZ3_RS01290 255802 257301 + type II secretory pathway protein gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01290 YPZ3_RS01295 YPZ3_0223 YPZ3_RS01295 257303 258517 + type III secretion protein SsaD gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01295 YPZ3_RS01300 YPZ3_RS01300 YPZ3_RS01300 258536 258757 + type III secretion system protein%2C YseE family gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01300 YPZ3_RS01305 YPZ3_0224 YPZ3_RS01305 258931 259551 + AraC family transcriptional regulator gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01305 YPZ3_RS01310 YPZ3_RS01310 YPZ3_RS01310 259561 259776 + type III secretion protein gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01310 YPZ3_RS01315 YPZ3_RS01315 YPZ3_RS01315 259773 260021 + type III secretion system protein%2C SsaH family gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01315 YPZ3_RS01320 YPZ3_RS01320 YPZ3_RS01320 260119 260370 + type III secretion apparatus protein%2C YscI/HrpB gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01320 YPZ3_RS01325 YPZ3_0225 YPZ3_RS01325 260367 261098 + type III secretion protein SsaJ gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01325 YPZ3_RS01330 YPZ3_0226 YPZ3_RS01330 261273 261866 + hypothetical protein gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01330 YPZ3_RS01335 YPZ3_0227 YPZ3_RS01335 261863 262510 + type III secretion protein HrpE gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01335 YPZ3_RS01340 YPZ3_0228 YPZ3_RS01340 262497 264551 + secretion system apparatus protein SsaV with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01340 YPZ3_RS01345 YPZ3_0229 YPZ3_RS01345 264538 265875 + type III secretion system ATPase gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01345 YPZ3_RS01350 YPZ3_0230 YPZ3_RS01350 265872 266273 + type III secretion protein gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01350 YPZ3_RS01355 YPZ3_0231 YPZ3_RS01355 266254 266652 + hypothetical protein gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01355 YPZ3_RS01360 YPZ3_0232 YPZ3_RS01360 266630 267592 + type III secretion protein SsaQ gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01360 YPZ3_RS01365 YPZ3_0233 ssaR ssaR 267719 268369 + flagellar biosynthesis protein FliP part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01365 YPZ3_RS01370 YPZ3_RS01370 YPZ3_RS01370 268366 268659 + type III secretion system protein SsaS gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01370 YPZ3_RS01375 YPZ3_0234 YPZ3_RS01375 268661 269455 + type III secretion protein gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01375 YPZ3_RS01380 YPZ3_0235 YPZ3_RS01380 269445 270512 + secretion system apparatus protein SsaU gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01380 YPZ3_RS01385 YPZ3_0236 YPZ3_RS01385 270895 272109 + membrane protein gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01385 YPZ3_RS01390 YPZ3_RS01390 YPZ3_RS01390 272106 272375 + hypothetical protein gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01390 YPZ3_RS01395 YPZ3_0237 YPZ3_RS01395 272453 273436 - LysR family transcriptional regulator gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01395 YPZ3_RS01400 YPZ3_0238 YPZ3_RS01400 273606 274892 + transporter gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01400 YPZ3_RS01405 YPZ3_0239 YPZ3_RS01405 274938 276119 + cystathionine beta-lyase catalyzes the formation of L-homocysteine from cystathionine gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01405 YPZ3_RS01410 YPZ3_0240 hmuV hmuV 276260 277060 - hemin import ATP-binding protein HmuV with HmuTU is involved in the transport of hemin gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01410 YPZ3_RS01415 YPZ3_0241 YPZ3_RS01415 277053 278057 - hemin ABC transporter permease gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01415 YPZ3_RS01420 YPZ3_0242 YPZ3_RS01420 278054 278893 - hemin-binding periplasmic protein HmuT gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01420 YPZ3_RS01425 YPZ3_0243 YPZ3_RS01425 278890 279927 - hemin transporter HmuS gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01425 YPZ3_RS01430 YPZ3_0244 YPZ3_RS01430 280046 282076 - hemin receptor gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01430 YPZ3_RS01435 YPZ3_0245 YPZ3_RS01435 282491 283141 - NmrA family protein gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01435 YPZ3_RS01440 YPZ3_0246 YPZ3_RS01440 283175 283684 - heme utilization carrier protein gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01440 YPZ3_RS01445 YPZ3_0247 YPZ3_RS01445 283717 285030 - heme utilization radical SAM enzyme HutW catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01445 YPZ3_RS01450 YPZ3_0248 YPZ3_RS01450 285371 286171 - methylenetetrahydrofolate reductase gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01450 YPZ3_RS01455 YPZ3_0249 YPZ3_RS01455 286486 286974 - tellurium resistance protein TerW gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01455 YPZ3_RS01460 YPZ3_0250 YPZ3_RS01460 287371 288330 - ATP-binding protein gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01460 YPZ3_RS01465 YPZ3_0251 YPZ3_RS01465 288330 289409 - hypothetical protein gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01465 YPZ3_RS01470 YPZ3_0252 YPZ3_RS01470 289402 290214 - hypothetical protein gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01470 YPZ3_RS01475 YPZ3_0253 YPZ3_RS01475 290207 291343 - hypothetical protein gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01475 YPZ3_RS01480 YPZ3_0254 YPZ3_RS01480 291355 292416 - hypothetical protein gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01480 YPZ3_RS01485 YPZ3_0255 YPZ3_RS01485 292692 293285 + tellurium resistance protein TerZ gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01485 YPZ3_RS01490 YPZ3_0256 YPZ3_RS01490 293285 294469 + tellurite resistance protein gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01490 YPZ3_RS01495 YPZ3_0257 YPZ3_RS01495 294502 294957 + tellurite resistance protein gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01495 YPZ3_RS01500 YPZ3_0258 YPZ3_RS01500 294979 296016 + tellurium resistance protein TerC gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01500 YPZ3_RS01505 YPZ3_0259 YPZ3_RS01505 296080 296658 + chemical-damaging agent resistance protein C gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01505 YPZ3_RS01510 YPZ3_0260 YPZ3_RS01510 296842 297417 + tellurium resistance protein TerE gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01510 YPZ3_RS01515 YPZ3_0261 YPZ3_RS01515 298130 298768 + hypothetical protein gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01515 YPZ3_RS01520 YPZ3_0262 YPZ3_RS01520 299019 301397 + membrane protein gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01520 YPZ3_RS01525 YPZ3_0263 YPZ3_RS01525 301469 302212 + fimbrial protein gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01525 YPZ3_RS01530 YPZ3_RS01530 YPZ3_RS01530 302223 302477 + hypothetical protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01530 YPZ3_RS01535 YPZ3_0264 YPZ3_RS01535 303670 304989 + hypothetical protein gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01535 YPZ3_RS01540 YPZ3_RS01540 YPZ3_RS01540 305506 305709 + hypothetical protein gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01540 YPZ3_RS01545 YPZ3_0265 YPZ3_RS01545 305998 308055 + oxidoreductase gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01545 YPZ3_RS01550 YPZ3_0266 YPZ3_RS01550 308399 312208 - autotransporter gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01550 YPZ3_RS01555 YPZ3_0267 YPZ3_RS01555 313040 313564 + Chorismate pyruvate-lyase gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01555 YPZ3_RS01560 YPZ3_0268 ubiA ubiA 313730 314596 + 4-hydroxybenzoate octaprenyltransferase catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01560 YPZ3_RS01565 YPZ3_0269 YPZ3_RS01565 314777 317254 - glycerol-3-phosphate acyltransferase PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01565 YPZ3_RS01570 YPZ3_0270 YPZ3_RS01570 317382 317753 + diacylglycerol kinase catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01570 YPZ3_RS01575 YPZ3_0271 YPZ3_RS01575 317878 318486 + LexA repressor Represses a number of genes involved in the response to DNA damage gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01575 YPZ3_RS01580 YPZ3_0272 YPZ3_RS01580 318688 319197 - transcriptional regulator Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01580 YPZ3_RS01585 YPZ3_0273 YPZ3_RS01585 319452 320489 + tRNA-dihydrouridine synthase A gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01585 YPZ3_RS01590 YPZ3_RS01590 YPZ3_RS01590 321005 321223 + phage-shock protein gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01590 YPZ3_RS01595 YPZ3_0274 YPZ3_RS01595 321568 322551 - quinone oxidoreductase gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01595 YPZ3_RS01600 YPZ3_0275 YPZ3_RS01600 322883 324289 + replicative DNA helicase unwinds double stranded DNA gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01600 YPZ3_RS01605 YPZ3_0276 alr alr 324386 325465 + alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01605 YPZ3_RS01610 YPZ3_0277 YPZ3_RS01610 325651 326844 + aromatic amino acid aminotransferase catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01610 YPZ3_RS01615 YPZ3_0278 YPZ3_RS01615 327371 327730 + hypothetical protein gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01615 YPZ3_RS01620 YPZ3_0279 YPZ3_RS01620 327823 330666 - UvrABC system protein A gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01620 YPZ3_RS01625 YPZ3_0280 YPZ3_RS01625 331124 331672 + single-stranded DNA-binding protein binds to single stranded DNA and PriA helcase facilitate replication restart gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01625 YPZ3_RS01630 YPZ3_0281 YPZ3_RS01630 331919 332233 - L-rhamnose mutarotase gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01630 YPZ3_RS01635 YPZ3_0282 YPZ3_RS01635 332247 333395 - alcohol dehydrogenase gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01635 YPZ3_RS01640 YPZ3_0283 YPZ3_RS01640 333462 334286 - rhamnulose-1-phosphate aldolase gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01640 YPZ3_RS01645 YPZ3_0284 YPZ3_RS01645 334299 335555 - L-rhamnose isomerase catalyzes the formation of L-rhamnulose from L-rhamnose gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01645 YPZ3_RS01650 YPZ3_0285 YPZ3_RS01650 335552 337009 - rhamnulokinase gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01650 YPZ3_RS01655 YPZ3_RS01655 YPZ3_RS01655 337008 337214 + phosphoribosylaminoimidazole synthetase gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01655 YPZ3_RS01660 YPZ3_RS01660 YPZ3_RS01660 337211 337354 + hypothetical protein gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01660 YPZ3_RS01665 YPZ3_0286 YPZ3_RS01665 337436 338257 + transcriptional activator RhaS gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01665 YPZ3_RS01670 YPZ3_0287 YPZ3_RS01670 338390 339262 + HTH-type transcriptional activator RhaR activates the expression of rhaRS in response to L-rhamnose gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01670 YPZ3_RS01675 YPZ3_0288 YPZ3_RS01675 339411 340445 - l-rhamnose-proton symporter transports L-rhamnose and L-lyxose into the cell gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01675 YPZ3_RS01680 YPZ3_RS01680 YPZ3_RS01680 340599 340865 + hypothetical protein gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01680 YPZ3_RS01685 YPZ3_0289 YPZ3_RS01685 341301 341726 - subtilase gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01685 YPZ3_RS01690 YPZ3_RS01690 YPZ3_RS01690 341956 342123 + hypothetical protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01690 YPZ3_RS01695 YPZ3_0290 YPZ3_RS01695 342153 344708 + viral enhancin protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01695 YPZ3_RS01700 YPZ3_0291 YPZ3_RS01700 345279 346205 + chromosome partitioning ATPase gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01700 YPZ3_RS01705 YPZ3_0292 YPZ3_RS01705 346202 347557 + DNA helicase unwinds double stranded DNA gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01705 YPZ3_RS01710 YPZ3_0293 YPZ3_RS01710 347560 349287 + hypothetical protein gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01710 YPZ3_RS01715 YPZ3_0294 YPZ3_RS01715 349287 350003 + hypothetical protein gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01715 YPZ3_RS01720 YPZ3_0295 YPZ3_RS01720 350008 350637 + hypothetical protein gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01720 YPZ3_RS01725 YPZ3_RS01725 YPZ3_RS01725 350634 350897 + hypothetical protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01725 YPZ3_RS01730 YPZ3_0296 YPZ3_RS01730 351031 352302 + hypothetical protein gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01730 YPZ3_RS01735 YPZ3_0297 YPZ3_RS01735 352680 353423 + hypothetical protein gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01735 YPZ3_RS01740 YPZ3_0298 YPZ3_RS01740 353420 353995 + hypothetical protein gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01740 YPZ3_RS01745 YPZ3_0299 YPZ3_RS01745 354010 356049 + DNA topoisomerase III gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01745 YPZ3_RS01750 YPZ3_0300 YPZ3_RS01750 356718 357185 + hypothetical protein gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01750 YPZ3_RS01755 YPZ3_0301 YPZ3_RS01755 357260 357760 + single-stranded DNA-binding protein gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01755 YPZ3_RS01760 YPZ3_0302 YPZ3_RS01760 357839 358273 + hypothetical protein gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01760 YPZ3_RS01765 YPZ3_0303 YPZ3_RS01765 358410 359042 + hypothetical protein gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01765 YPZ3_RS01770 YPZ3_0304 YPZ3_RS01770 359039 359782 + hypothetical protein gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01770 YPZ3_RS01775 YPZ3_0305 YPZ3_RS01775 359793 360503 + hypothetical protein gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01775 YPZ3_RS01780 YPZ3_0306 YPZ3_RS01780 360482 361174 + lytic transglycosylase gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01780 YPZ3_RS01785 YPZ3_0307 YPZ3_RS01785 361177 361701 + hypothetical protein gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01785 YPZ3_RS01790 YPZ3_0308 YPZ3_RS01790 361698 362324 + restriction endonuclease gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01790 YPZ3_RS01795 YPZ3_0309 YPZ3_RS01795 362308 362838 + hypothetical protein gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01795 YPZ3_RS01800 YPZ3_0310 YPZ3_RS01800 362831 364945 + conjugal transfer protein TraG gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01800 YPZ3_RS01805 YPZ3_0311 YPZ3_RS01805 364926 365684 + membrane protein gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01805 YPZ3_RS01810 YPZ3_0312 YPZ3_RS01810 365919 366248 + hypothetical protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01810 YPZ3_RS01815 YPZ3_RS01815 YPZ3_RS01815 366248 366490 + integrating conjugative element protein gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01815 YPZ3_RS01820 YPZ3_0313 YPZ3_RS01820 366559 366924 + membrane protein gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01820 YPZ3_RS01825 YPZ3_0314 YPZ3_RS01825 366936 367301 + membrane protein gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01825 YPZ3_RS01830 YPZ3_0315 YPZ3_RS01830 367298 367969 + hypothetical protein gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01830 YPZ3_RS01835 YPZ3_0316 YPZ3_RS01835 367966 368877 + hypothetical protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01835 YPZ3_RS01840 YPZ3_0317 YPZ3_RS01840 368870 370366 + hypothetical protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01840 YPZ3_RS01845 YPZ3_RS01845 YPZ3_RS01845 370523 370948 + conjugal transfer protein gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01845 YPZ3_RS01850 YPZ3_0319 YPZ3_RS01850 370948 373806 + conjugal transfer protein gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01850 YPZ3_RS01855 YPZ3_RS01855 YPZ3_RS01855 373803 374207 + hypothetical protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01855 YPZ3_RS01860 YPZ3_RS01860 YPZ3_RS01860 374368 374661 + hypothetical protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01860 YPZ3_RS01865 YPZ3_0320 YPZ3_RS01865 375097 378357 + hypothetical protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01865 YPZ3_RS01870 YPZ3_0321 YPZ3_RS01870 378540 378944 + hypothetical protein gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01870 YPZ3_RS01875 YPZ3_0322 YPZ3_RS01875 378946 379953 + hypothetical protein gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01875 YPZ3_RS01880 YPZ3_0323 YPZ3_RS01880 379964 381445 + hypothetical protein gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01880 YPZ3_RS01885 YPZ3_RS01885 YPZ3_RS01885 381462 381833 + hypothetical protein gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01885 YPZ3_RS01890 YPZ3_0324 YPZ3_RS01890 381830 383368 + membrane protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01890 YPZ3_RS01895 YPZ3_0325 YPZ3_RS01895 383405 383806 - hypothetical protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01895 YPZ3_RS01900 YPZ3_0326 YPZ3_RS01900 384018 384575 + hypothetical protein gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01900 YPZ3_RS01905 YPZ3_0327 YPZ3_RS01905 384591 384935 + hypothetical protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01905 YPZ3_RS01910 YPZ3_RS01910 YPZ3_RS01910 384937 385200 + hypothetical protein gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01910 YPZ3_RS01915 YPZ3_0328 YPZ3_RS01915 386260 387159 + DNA-binding protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01915 YPZ3_RS01920 YPZ3_0329 YPZ3_RS01920 387692 388012 + hypothetical protein gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01920 YPZ3_RS01925 YPZ3_0330 YPZ3_RS01925 388103 388501 + hypothetical protein gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01925 YPZ3_RS01930 YPZ3_0331 YPZ3_RS01930 388618 389085 + hypothetical protein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01930 YPZ3_RS01935 YPZ3_0332 YPZ3_RS01935 389174 389776 + hypothetical protein gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01935 YPZ3_RS01940 YPZ3_0333 YPZ3_RS01940 389851 390861 + hypothetical protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01940 YPZ3_RS01945 YPZ3_RS01945 YPZ3_RS01945 390873 391151 + hypothetical protein gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01945 YPZ3_RS01950 YPZ3_RS01950 YPZ3_RS01950 391144 391416 + hypothetical protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01950 YPZ3_RS01955 YPZ3_0334 YPZ3_RS01955 391532 392455 + hypothetical protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01955 YPZ3_RS01960 YPZ3_RS01960 YPZ3_RS01960 392577 392849 + hypothetical protein gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01960 YPZ3_RS01965 YPZ3_0335 YPZ3_RS01965 392900 393319 + transposase gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01965 YPZ3_RS01970 YPZ3_0336 YPZ3_RS01970 393312 393662 + isocitrate lyase gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01970 YPZ3_RS01975 YPZ3_0337 YPZ3_RS01975 393693 395285 + transposase gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01975 YPZ3_RS01980 YPZ3_RS01980 YPZ3_RS01980 395332 395763 + integrase gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01980 YPZ3_RS01985 YPZ3_RS01985 YPZ3_RS01985 395912 396157 + hypothetical protein gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01985 YPZ3_RS01990 YPZ3_0338 YPZ3_RS01990 396478 397227 + MFS transporter gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01990 YPZ3_RS01995 YPZ3_RS01995 YPZ3_RS01995 397467 398144 + LuxR family transcriptional regulator gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS01995 YPZ3_RS02000 YPZ3_0340 YPZ3_RS02000 398542 399987 + DNA helicase gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02000 YPZ3_RS02005 YPZ3_0341 YPZ3_RS02005 399981 401690 + relaxase gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02005 YPZ3_RS02010 YPZ3_0342 YPZ3_RS02010 401758 402771 + tyrosine recombinase XerD gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02010 YPZ3_RS02015 YPZ3_t2 YPZ3_RS02015 402965 403041 - tRNA-Phe tRNA gene402 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02015 YPZ3_RS02020 YPZ3_0343 YPZ3_RS02020 403186 403761 - transcriptional regulator gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02020 YPZ3_RS02025 YPZ3_0344 YPZ3_RS02025 404181 406196 + oxidoreductase Fe-S-binding subunit unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic) gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02025 YPZ3_RS02030 YPZ3_0345 YPZ3_RS02030 406219 406776 + 4Fe-4S ferredoxin gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02030 YPZ3_RS02035 YPZ3_0346 YPZ3_RS02035 406799 408946 + formate dehydrogenase selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02035 YPZ3_RS02040 YPZ3_0347 dipZ dipZ 409008 410795 - thiol:disulfide interchange protein DsbD two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02040 YPZ3_RS02045 YPZ3_0348 YPZ3_RS02045 410771 411094 - divalent ion tolerance protein CutA copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02045 YPZ3_RS02050 YPZ3_0349 YPZ3_RS02050 411315 412616 - C4-dicarboxylate ABC transporter functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02050 YPZ3_RS02055 YPZ3_0350 aspA aspA 412736 414172 - aspartate ammonia-lyase catalyzes the formation of fumarate from aspartate gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02055 YPZ3_RS02060 YPZ3_0351 YPZ3_RS02060 414620 415198 + exclusion suppressor FxsA gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02060 YPZ3_RS02065 YPZ3_RS02065 groES groES 415453 415746 + molecular chaperone GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02065 YPZ3_RS02070 YPZ3_0352 groEL groEL 415793 417439 + molecular chaperone GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02070 YPZ3_RS02075 YPZ3_0353 YPZ3_RS02075 418063 418461 + membrane protein gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02075 YPZ3_RS02080 YPZ3_0354 YPZ3_RS02080 418746 419774 - EF-P beta-lysylation protein EpmB gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02080 YPZ3_RS02085 YPZ3_0355 YPZ3_RS02085 419810 420376 + elongation factor P gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02085 YPZ3_RS02090 YPZ3_RS02090 YPZ3_RS02090 420623 420937 + quaternary ammonium compound-resistance protein SugE member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02090 YPZ3_RS02095 YPZ3_0357 YPZ3_RS02095 421102 421458 - fumarate reductase subunit D gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02095 YPZ3_RS02100 YPZ3_0358 YPZ3_RS02100 421475 421867 - fumarate reductase subunit C part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02100 YPZ3_RS02105 YPZ3_0359 YPZ3_RS02105 421884 422618 - fumarate reductase iron-sulfur subunit part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02105 YPZ3_RS02110 YPZ3_0360 YPZ3_RS02110 422611 424434 - fumarate reductase flavoprotein subunit part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02110 YPZ3_RS02115 YPZ3_RS02115 YPZ3_RS02115 424541 424732 + membrane protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02115 YPZ3_RS02120 YPZ3_0361 YPZ3_RS02120 424892 425869 + elongation factor P--(R)-beta-lysine ligase poxA%3B regulates pyruvate oxidase poxB gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02120 YPZ3_RS02125 YPZ3_0362 YPZ3_RS02125 425990 429331 - mechanosensitive channel protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02125 YPZ3_RS02130 YPZ3_0363 YPZ3_RS02130 429373 430254 - phosphatidylserine decarboxylase proenzyme gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02130 YPZ3_RS02135 YPZ3_0364 YPZ3_RS02135 430579 431631 - GTPase RsgA EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02135 YPZ3_RS02140 YPZ3_RS02140 YPZ3_RS02140 431638 431832 - hypothetical protein gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02140 YPZ3_RS02145 YPZ3_0365 YPZ3_RS02145 431831 432376 + oligoribonuclease 3'-5' exoribonuclease specific for small oligoribonuclotides gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02145 YPZ3_RS02155 YPZ3_t3 YPZ3_RS02155 432934 433009 + tRNA-Gly tRNA gene429 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02155 YPZ3_RS02160 YPZ3_0366 YPZ3_RS02160 433321 434556 - epoxyqueuosine reductase gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02160 YPZ3_RS02165 YPZ3_0367 YPZ3_RS02165 434555 436069 + carbohydrate kinase gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02165 YPZ3_RS02170 YPZ3_0368 YPZ3_RS02170 436080 436550 + tRNA threonylcarbamoyladenosine biosynthesis protein TsaE needed for nucleoid integrity%3B possibly involved in cell wall synthesis gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02170 YPZ3_RS02175 YPZ3_0369 YPZ3_RS02175 436558 438471 + N-acetylmuramoyl-L-alanine amidase gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02175 YPZ3_RS02180 YPZ3_0370 YPZ3_RS02180 438487 440394 + DNA mismatch repair protein MutL gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02180 YPZ3_RS02185 YPZ3_0371 miaA miaA 440387 441328 + tRNA dimethylallyltransferase IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02185 YPZ3_RS02190 YPZ3_0372 hfq hfq 441444 441749 + RNA chaperone Hfq HF-I%2C host factor for RNA phage Q beta replication gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02190 YPZ3_RS02195 YPZ3_0373 YPZ3_RS02195 441848 443134 + GTPase HflX involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02195 YPZ3_RS02200 YPZ3_0374 YPZ3_RS02200 443375 444634 + cell division protein FtsH with HflC inhibits proteolysis of lambda cII protein by FtsH gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02200 YPZ3_RS02205 YPZ3_0375 YPZ3_RS02205 444638 445642 + cell division protein FtsH with HflK inhibits proteolysis of lambda cII protein by FtsH gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02205 YPZ3_RS02210 YPZ3_RS02210 YPZ3_RS02210 445814 446014 + membrane protein gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02210 YPZ3_RS02215 YPZ3_0376 YPZ3_RS02215 446114 447412 + adenylosuccinate synthetase catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02215 YPZ3_RS02220 YPZ3_0377 YPZ3_RS02220 447781 448206 + transcriptional regulator negatively regulates the transcription of genes upregulated by nitrosative stress gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02220 YPZ3_RS02225 YPZ3_0378 YPZ3_RS02225 448447 450981 + exoribonuclease R 3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02225 YPZ3_RS02230 YPZ3_0379 YPZ3_RS02230 451100 451840 + 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB Specifically methylates the ribose of guanosine 2251 in 23S rRNA gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02230 YPZ3_RS02235 YPZ3_0380 YPZ3_RS02235 452260 453891 + isovaleryl CoA dehydrogenase catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02235 YPZ3_RS02240 YPZ3_0381 YPZ3_RS02240 453963 454274 - transporter in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02240 YPZ3_RS02245 YPZ3_RS02245 YPZ3_RS02245 454465 454563 + phospholipase gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02245 YPZ3_RS02250 YPZ3_0382 YPZ3_RS02250 454614 455393 - transposase gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02250 YPZ3_RS02255 YPZ3_0383 YPZ3_RS02255 455393 456415 - transposase gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02255 YPZ3_RS02260 YPZ3_0384 YPZ3_RS02260 456549 458612 + ATP-binding protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02260 YPZ3_RS02265 YPZ3_0385 YPZ3_RS02265 458609 459925 + mcrBC 5-methylcytosine restriction system component family protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02265 YPZ3_RS02270 YPZ3_RS02270 YPZ3_RS02270 459992 460222 + hypothetical protein gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02270 YPZ3_RS02275 YPZ3_RS02275 YPZ3_RS02275 460547 460810 - transposase gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02275 YPZ3_RS02280 YPZ3_0386 YPZ3_RS02280 460949 462274 + restriction endonuclease subunit M gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02280 YPZ3_RS02285 YPZ3_0387 YPZ3_RS02285 462324 463046 + histidine kinase gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02285 YPZ3_RS02290 YPZ3_0388 YPZ3_RS02290 463018 464391 + hypothetical protein gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02290 YPZ3_RS02295 YPZ3_RS02295 YPZ3_RS02295 464735 465022 - hypothetical protein gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02295 YPZ3_RS02300 YPZ3_RS02300 YPZ3_RS02300 465224 465421 - hypothetical protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02300 YPZ3_RS02305 YPZ3_RS02305 YPZ3_RS02305 465462 465557 + transposase gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02305 YPZ3_RS02310 YPZ3_0389 YPZ3_RS02310 465663 467051 + ATPase involved in DNA repair gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02310 YPZ3_RS02315 YPZ3_0390 YPZ3_RS02315 467048 468202 + hypothetical protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02315 YPZ3_RS02320 YPZ3_RS02320 YPZ3_RS02320 468214 468339 - hypothetical protein gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02320 YPZ3_RS02325 YPZ3_0391 YPZ3_RS02325 468348 469394 - peptidase M48 gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02325 YPZ3_RS02330 YPZ3_0392 YPZ3_RS02330 469405 470601 - membrane protein gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02330 YPZ3_RS02335 YPZ3_0393 YPZ3_RS02335 471307 471843 + hypothetical protein gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02335 YPZ3_RS02340 YPZ3_0394 YPZ3_RS02340 471845 472720 + transcriptional regulator gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02340 YPZ3_RS02345 YPZ3_0395 YPZ3_RS02345 472713 473057 - PTS fructose transporter subunit IIB FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02345 YPZ3_RS02350 YPZ3_0396 YPZ3_RS02350 473150 473470 - PTS fructose transporter subunit IIB FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02350 YPZ3_RS02355 YPZ3_0397 YPZ3_RS02355 473811 474893 - PTS fructose transporter subunit IIC gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02355 YPZ3_RS02360 YPZ3_0398 YPZ3_RS02360 475258 477816 + PTS fructose transporter subunit IIA Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02360 YPZ3_RS02365 YPZ3_0399 YPZ3_RS02365 477878 478369 - glycoprotein/receptor precursor gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02365 YPZ3_RS02370 YPZ3_RS02370 YPZ3_RS02370 478670 478960 - autoinducer 2-degrading protein LsrG gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02370 YPZ3_RS02375 YPZ3_0400 YPZ3_RS02375 479024 479899 - aldolase involved in autoinducer 2 transport and processing gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02375 YPZ3_RS02380 YPZ3_0401 YPZ3_RS02380 479955 480974 - autoinducer 2-binding protein LsrB with lsrACD is involved in the transport of autoinducer 2 into the cell gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02380 YPZ3_RS02385 YPZ3_0402 YPZ3_RS02385 481033 482034 - autoinducer 2 import system permease LsrD with IsrABC is involved with autoinducer 2 import gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02385 YPZ3_RS02390 YPZ3_0403 YPZ3_RS02390 482031 483086 - autoinducer 2 import system permease LsrC with LsrADB is involved in the transport of autoindiuce 2 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02390 YPZ3_RS02395 YPZ3_0404 YPZ3_RS02395 483080 484663 - autoinducer 2 import ATP-binding protein LsrA with LsrCDB is involved in the transport of autoindiuce 2 gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02395 YPZ3_RS02400 YPZ3_RS02400 YPZ3_RS02400 484773 484979 - membrane protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02400 YPZ3_RS02405 YPZ3_RS02405 YPZ3_RS02405 485008 485995 + transcriptional regulator LsrR regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02405 YPZ3_RS02410 YPZ3_0407 YPZ3_RS02410 486166 487758 + autoinducer 2 kinase LsrK gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02410 YPZ3_RS02415 YPZ3_0408 YPZ3_RS02415 488104 489267 + LPS biosynthesis protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02415 YPZ3_RS02420 YPZ3_0409 YPZ3_RS02420 489315 490547 + O-antigen biosynthesis protein gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02420 YPZ3_RS02430 YPZ3_RS02430 YPZ3_RS02430 491357 491590 + hypothetical protein gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02430 YPZ3_RS02435 YPZ3_0410 YPZ3_RS02435 491642 492724 + lipoprotein gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02435 YPZ3_RS02440 YPZ3_0411 YPZ3_RS02440 492724 495810 + multidrug transporter AcrB gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02440 YPZ3_RS02445 YPZ3_RS02445 YPZ3_RS02445 495846 496037 - hypothetical protein gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02445 YPZ3_RS02450 YPZ3_RS02450 YPZ3_RS02450 496171 496467 - hypothetical protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02450 YPZ3_RS02455 YPZ3_RS02455 YPZ3_RS02455 496650 496973 - hypothetical protein gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02455 YPZ3_RS02460 YPZ3_0412 YPZ3_RS02460 497306 498391 + pectinesterase gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02460 YPZ3_RS02465 YPZ3_0413 YPZ3_RS02465 498932 500104 - diguanylate cyclase gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02465 YPZ3_RS02470 YPZ3_0414 YPZ3_RS02470 500353 500685 + membrane protein gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02470 YPZ3_RS02475 YPZ3_t4 YPZ3_RS02475 500855 500941 - tRNA-Leu tRNA gene493 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02475 YPZ3_RS02480 YPZ3_0415 YPZ3_RS02480 501198 502241 - ribosomal RNA small subunit methyltransferase C gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02480 YPZ3_RS02485 YPZ3_0416 YPZ3_RS02485 502354 502791 + DNA polymerase III subunit psi with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02485 YPZ3_RS02490 YPZ3_RS02490 rimI rimI 502736 503179 + ribosomal-protein-alanine N-acetyltransferase alanine acetyltransferase that specifically acetylates ribosomal protein S18 gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02490 YPZ3_RS02495 YPZ3_0418 prfC prfC 503358 504947 + peptide chain release factor 3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02495 YPZ3_RS02500 YPZ3_0419 YPZ3_RS02500 505274 505888 + hypothetical protein gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02500 YPZ3_RS02505 YPZ3_RS02505 YPZ3_RS02505 506055 506216 + membrane protein gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02505 YPZ3_RS02510 YPZ3_0420 YPZ3_RS02510 506293 507561 + alpha/beta hydrolase gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02510 YPZ3_RS02515 YPZ3_0421 YPZ3_RS02515 507598 508386 + DNAse gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02515 YPZ3_RS02520 YPZ3_0422 YPZ3_RS02520 508915 510192 + nucleoside transporter NupC gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02520 YPZ3_RS02525 YPZ3_0423 YPZ3_RS02525 510768 511565 + deoxyribose-phosphate aldolase 2 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02525 YPZ3_RS02530 YPZ3_0424 YPZ3_RS02530 511686 512228 + thymidine phosphorylase gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02530 YPZ3_RS02535 YPZ3_0425 YPZ3_RS02535 512225 513004 + thymidine phosphorylase gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02535 YPZ3_RS02540 YPZ3_0426 YPZ3_RS02540 513136 514359 + phosphopentomutase gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02540 YPZ3_RS02545 YPZ3_0427 deoD deoD 514484 515203 + purine nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02545 YPZ3_RS02550 YPZ3_0428 YPZ3_RS02550 515315 516016 - protein Smp gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02550 YPZ3_RS02555 YPZ3_0429 serB serB 516248 517228 + phosphoserine phosphatase catalyzes the formation of serine from O-phosphoserine gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02555 YPZ3_RS02560 YPZ3_0430 YPZ3_RS02560 517316 518698 + DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02560 YPZ3_RS02565 YPZ3_0431 YPZ3_RS02565 518857 520128 + nicotinamide-nucleotide adenylyltransferase catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02565 YPZ3_RS02570 YPZ3_0432 YPZ3_RS02570 520285 521415 + cell division protein Fic gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02570 YPZ3_RS02575 YPZ3_RS02575 YPZ3_RS02575 521561 523203 - ABC transporter ATP-binding protein ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02575 YPZ3_RS02580 YPZ3_0435 YPZ3_RS02580 523407 523913 - lipoprotein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02580 YPZ3_RS02585 YPZ3_0436 YPZ3_RS02585 523919 525220 - diguanylate cyclase gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02585 YPZ3_RS02590 YPZ3_0437 YPZ3_RS02590 525217 525840 - hypothetical protein gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02590 YPZ3_RS02595 YPZ3_0438 YPZ3_RS02595 526215 528941 - carbonate dehydratase gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02595 YPZ3_RS02600 YPZ3_0439 YPZ3_RS02600 529511 531430 + murein transglycosylase catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02600 YPZ3_RS02605 YPZ3_0440 YPZ3_RS02605 531666 532058 + Trp operon repressor gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02605 YPZ3_RS02610 YPZ3_0441 yjjX yjjX 532055 532597 - non-canonical purine NTP phosphatase pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02610 YPZ3_RS02615 YPZ3_0442 YPZ3_RS02615 532691 533338 + phosphoglycerate mutase GpmB catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02615 YPZ3_RS02620 YPZ3_0443 YPZ3_RS02620 533335 534201 - RobA family efflux pump transcriptional activator AraC family%3B binds to the right arm of the replication origin oriC gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02620 YPZ3_RS02625 YPZ3_0444 YPZ3_RS02625 534427 534894 + hypothetical protein gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02625 YPZ3_RS02630 YPZ3_0445 YPZ3_RS02630 535068 535784 - two-component system response regulator gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02630 YPZ3_RS02635 YPZ3_0446 thrA thrA 536888 539347 + bifunctional aspartokinase I/homoserine dehydrogenase I multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02635 YPZ3_RS02640 YPZ3_0447 YPZ3_RS02640 539350 540279 + homoserine kinase gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02640 YPZ3_RS02645 YPZ3_0448 YPZ3_RS02645 540283 541572 + threonine synthase gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02645 YPZ3_RS02650 YPZ3_0449 YPZ3_RS02650 542389 543165 - hypothetical protein gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02650 YPZ3_RS02655 YPZ3_0450 YPZ3_RS02655 543697 544650 + transaldolase gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02655 YPZ3_RS02660 YPZ3_0451 mogA mogA 544938 545525 + molybdenum cofactor biosynthesis protein MogA forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02660 YPZ3_RS02665 YPZ3_0452 YPZ3_RS02665 545653 547041 + MFS transporter gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02665 YPZ3_RS02670 YPZ3_0453 YPZ3_RS02670 547111 549558 - GNAT family acetyltransferase gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02670 YPZ3_RS02675 YPZ3_0454 YPZ3_RS02675 549847 550458 - hypothetical protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02675 YPZ3_RS02680 YPZ3_0455 dnaK dnaK 550832 552742 + molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02680 YPZ3_RS02685 YPZ3_0456 YPZ3_RS02685 552854 553993 + molecular chaperone DnaJ chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02685 YPZ3_RS02690 YPZ3_0457 nhaA nhaA 554236 555420 + Na+/H+ antiporter NhaA exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02690 YPZ3_RS02695 YPZ3_0458 nhaR nhaR 555550 556449 + transcriptional regulator Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02695 YPZ3_RS02700 YPZ3_RS02700 rpsT rpsT 556580 556843 - 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02700 YPZ3_RS02705 YPZ3_RS02705 YPZ3_RS02705 556865 557041 - hypothetical protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02705 YPZ3_RS02710 YPZ3_RS02710 YPZ3_RS02710 557258 558197 + FMN adenylyltransferase gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02710 YPZ3_RS02715 YPZ3_0461 ileS ileS 558229 561045 + isoleucine--tRNA ligase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02715 YPZ3_RS02720 YPZ3_0462 lspA lspA 561045 561554 + lipoprotein signal peptidase lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02720 YPZ3_RS02725 YPZ3_0463 YPZ3_RS02725 561622 562080 + peptidyl-prolyl cis-trans isomerase rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02725 YPZ3_RS02730 YPZ3_0464 ispH ispH 562061 563014 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02730 YPZ3_RS02735 YPZ3_RS02735 YPZ3_RS02735 563082 563207 + hypothetical protein gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02735 YPZ3_RS02740 YPZ3_RS02740 YPZ3_RS02740 563236 563406 + invasin gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02740 YPZ3_RS02745 YPZ3_0465 YPZ3_RS02745 563396 563854 + transposase gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02745 YPZ3_RS02750 YPZ3_0466 YPZ3_RS02750 564307 565128 + 4-hydroxy-tetrahydrodipicolinate reductase catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02750 YPZ3_RS02755 YPZ3_0467 YPZ3_RS02755 565601 566776 + carbamoyl-phosphate synthase small chain catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02755 YPZ3_RS02760 YPZ3_0468 carB carB 566792 570025 + carbamoyl-phosphate synthase large chain four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02760 YPZ3_RS02765 YPZ3_0469 YPZ3_RS02765 570253 570867 - lysine transporter LysE gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02765 YPZ3_RS02770 YPZ3_0470 YPZ3_RS02770 571191 571991 + membrane protein gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02770 YPZ3_RS02775 YPZ3_0471 YPZ3_RS02775 571988 572443 + hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02775 YPZ3_RS02780 YPZ3_0472 folA folA 572593 573075 + dihydrofolate reductase catalyzes the reduction of dihydrofolate to tetrahydrofolate gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02780 YPZ3_RS02785 YPZ3_0473 YPZ3_RS02785 573287 573745 + transposase gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02785 YPZ3_RS02790 YPZ3_RS02790 YPZ3_RS02790 574280 574501 + hypothetical protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02790 YPZ3_RS02795 YPZ3_0474 YPZ3_RS02795 574628 575092 + hypothetical protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02795 YPZ3_RS02800 YPZ3_0475 apaH apaH 575182 576051 - bis(5'-nucleosyl)-tetraphosphatase symmetrical hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02800 YPZ3_RS02805 YPZ3_0476 apaG apaG 576068 576445 - protein ApaG protein associated with Co2+ and Mg2+ efflux gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02805 YPZ3_RS02810 YPZ3_0477 ksgA ksgA 576459 577277 - ribosomal RNA small subunit methyltransferase A in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02810 YPZ3_RS02815 YPZ3_0478 pdxA pdxA 577270 578265 - 4-hydroxythreonine-4-phosphate dehydrogenase catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02815 YPZ3_RS02820 YPZ3_0479 YPZ3_RS02820 578249 579553 - chaperone SurA Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02820 YPZ3_RS02825 YPZ3_0480 YPZ3_RS02825 579621 581963 - LPS-assembly protein LptD is involved in outer membrane permeability gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02825 YPZ3_RS02830 YPZ3_0481 djlA djlA 582148 582981 + dnaJ-like protein DjlA functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02830 YPZ3_RS02835 YPZ3_0482 YPZ3_RS02835 583279 583899 - ribosomal large subunit pseudouridine synthase A catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02835 YPZ3_RS02840 YPZ3_0483 YPZ3_RS02840 585122 585865 - hypothetical protein gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02840 YPZ3_RS02845 YPZ3_0484 YPZ3_RS02845 586195 587208 + membrane protein gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02845 YPZ3_RS02850 YPZ3_0485 YPZ3_RS02850 587219 587779 + hypothetical protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02850 YPZ3_RS02855 YPZ3_0486 YPZ3_RS02855 587788 589290 + type VI secretion protein EvpB gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02855 YPZ3_RS02860 YPZ3_0487 YPZ3_RS02860 589453 589971 + type VI secretion protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02860 YPZ3_RS02865 YPZ3_0488 YPZ3_RS02865 590045 590488 + lysozyme gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02865 YPZ3_RS02870 YPZ3_0489 YPZ3_RS02870 590521 592365 + type VI secretion protein TssF gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02870 YPZ3_RS02875 YPZ3_0490 YPZ3_RS02875 592358 593341 + type VI secretion protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02875 YPZ3_RS02880 YPZ3_0491 YPZ3_RS02880 593359 595947 + peptidase gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02880 YPZ3_RS02885 YPZ3_0492 YPZ3_RS02885 596051 598399 + type IV secretion protein Rhs gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02885 YPZ3_RS02890 YPZ3_0493 YPZ3_RS02890 598412 598984 + hypothetical protein gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02890 YPZ3_RS02895 YPZ3_0494 YPZ3_RS02895 599009 600631 + hypothetical protein gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02895 YPZ3_RS02900 YPZ3_0495 YPZ3_RS02900 600657 601760 + hypothetical protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02900 YPZ3_RS02905 YPZ3_0496 YPZ3_RS02905 601753 602370 + hypothetical protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02905 YPZ3_RS02910 YPZ3_RS02910 YPZ3_RS02910 602376 602741 + type VI secretion protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02910 YPZ3_RS02915 YPZ3_0497 YPZ3_RS02915 602734 603225 + lipoprotein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02915 YPZ3_RS02920 YPZ3_0498 YPZ3_RS02920 603345 604700 + type VI secretion protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02920 YPZ3_RS02925 YPZ3_0499 YPZ3_RS02925 604697 606307 + hypothetical protein gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02925 YPZ3_RS02930 YPZ3_0500 YPZ3_RS02930 606369 609809 + membrane protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02930 YPZ3_RS02935 YPZ3_0501 YPZ3_RS02935 609831 610184 + hypothetical protein gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02935 YPZ3_RS02940 YPZ3_0502 YPZ3_RS02940 610440 613346 - RNA polymerase-associated protein RapA transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02940 YPZ3_RS02945 YPZ3_0503 YPZ3_RS02945 613807 616176 - DNA polymerase II Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02945 YPZ3_RS02950 YPZ3_0504 YPZ3_RS02950 616372 617139 + membrane protein gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02950 YPZ3_RS02955 YPZ3_0505 thiQ thiQ 617208 617918 - thiamine import ATP-binding protein ThiQ with TbpA and ThiP is part of the thiamine and TPP transport system gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02955 YPZ3_RS02960 YPZ3_0506 thiP thiP 617905 619512 - thiamine transporter membrane protein permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02960 YPZ3_RS02965 YPZ3_0507 tbpA tbpA 619488 620534 - thiamine ABC transporter substrate-binding protein part of the thiamine and TPP transport system tbpA-thiPQ gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02965 YPZ3_RS02970 YPZ3_RS02970 YPZ3_RS02970 621035 621319 + membrane protein gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02970 YPZ3_RS02975 YPZ3_0508 YPZ3_RS02975 621420 623081 - transcriptional regulator activates sgrS under glucose-phosphate stress conditions gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02975 YPZ3_RS02980 YPZ3_RS02980 YPZ3_RS02980 623319 623492 + hypothetical protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02980 YPZ3_RS02985 YPZ3_0509 YPZ3_RS02985 623745 624677 + sugar transporter gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02985 YPZ3_RS02990 YPZ3_0510 YPZ3_RS02990 624745 625524 - transposase gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02990 YPZ3_RS02995 YPZ3_0511 YPZ3_RS02995 625524 626546 - transposase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS02995 YPZ3_RS03000 YPZ3_RS03000 YPZ3_RS03000 626634 626885 + sugar transporter gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03000 YPZ3_RS03005 YPZ3_0512 leuD leuD 627126 627728 - 3-isopropylmalate dehydratase small subunit catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03005 YPZ3_RS03010 YPZ3_0513 YPZ3_RS03010 627743 629173 - 3-isopropylmalate dehydratase large subunit dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03010 YPZ3_RS03015 YPZ3_0514 YPZ3_RS03015 629175 630266 - 3-isopropylmalate dehydrogenase gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03015 YPZ3_RS03020 YPZ3_0515 YPZ3_RS03020 630269 631831 - 2-isopropylmalate synthase gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03020 YPZ3_RS03025 YPZ3_0516 YPZ3_RS03025 631978 632436 - transposase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03025 YPZ3_RS03030 YPZ3_RS03030 YPZ3_RS03030 632426 632596 - hypothetical protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03030 YPZ3_RS03035 YPZ3_0517 leuO leuO 633758 634714 + leucine transcriptional activator activator for leuABCD operon%3B member of LysR family of transcriptional activators gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03035 YPZ3_RS03040 YPZ3_RS03040 YPZ3_RS03040 635048 635254 + hypothetical protein gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03040 YPZ3_RS03045 YPZ3_0518 YPZ3_RS03045 635251 637056 + long-chain fatty acid--CoA ligase gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03045 YPZ3_RS03050 YPZ3_RS03050 YPZ3_RS03050 637087 637197 + hypothetical protein gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03050 YPZ3_RS03055 YPZ3_0519 YPZ3_RS03055 637516 639243 + acetolactate synthase catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03055 YPZ3_RS03060 YPZ3_0520 ilvH ilvH 639246 639740 + acetolactate synthase with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03060 YPZ3_RS03065 YPZ3_0521 YPZ3_RS03065 639939 640397 + transposase gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03065 YPZ3_RS03070 YPZ3_RS03070 YPZ3_RS03070 640719 640835 - hypothetical protein gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03070 YPZ3_RS03075 YPZ3_0522 YPZ3_RS03075 640902 641912 + transcriptional regulator binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03075 YPZ3_RS03080 YPZ3_0523 YPZ3_RS03080 642043 642483 - alanine transporter gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03080 YPZ3_RS03085 YPZ3_0524 YPZ3_RS03085 643605 644063 + transcriptional regulator MraZ gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03085 YPZ3_RS03090 YPZ3_0525 YPZ3_RS03090 644066 645028 + ribosomal RNA small subunit methyltransferase H gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03090 YPZ3_RS03095 YPZ3_0526 YPZ3_RS03095 645025 645342 + cell division protein FtsL gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03095 YPZ3_RS03100 YPZ3_0527 YPZ3_RS03100 645408 647171 + penicillin-binding protein 3 penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03100 YPZ3_RS03105 YPZ3_0528 murE murE 647158 648645 + UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03105 YPZ3_RS03110 YPZ3_0529 murF murF 648642 650018 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03110 YPZ3_RS03115 YPZ3_0530 mraY mraY 650012 651094 + phospho-N-acetylmuramoyl-pentapeptide transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03115 YPZ3_RS03120 YPZ3_0531 murD murD 651097 652413 + UDP-N-acetylmuramoylalanine--D-glutamate ligase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03120 YPZ3_RS03125 YPZ3_0532 YPZ3_RS03125 652413 653615 + cell division protein FtsW integral membrane protein involved in stabilizing FstZ ring during cell division gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03125 YPZ3_RS03130 YPZ3_0533 murG murG 653612 654682 + UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03130 YPZ3_RS03135 YPZ3_0534 YPZ3_RS03135 654820 656295 + UDP-N-acetylmuramate--L-alanine ligase gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03135 YPZ3_RS03140 YPZ3_0535 ddl ddl 656288 657208 + D-alanine--D-alanine ligase D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03140 YPZ3_RS03145 YPZ3_0536 YPZ3_RS03145 657210 658037 + cell division protein FtsQ involved in septum formation gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03145 YPZ3_RS03150 YPZ3_0537 ftsA ftsA 658064 659320 + cell division protein FtsA ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03150 YPZ3_RS03155 YPZ3_0538 YPZ3_RS03155 659393 660544 + cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03155 YPZ3_RS03160 YPZ3_0539 lpxC lpxC 660644 661564 + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03160 YPZ3_RS03165 YPZ3_0540 YPZ3_RS03165 661731 662255 - hypothetical protein gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03165 YPZ3_RS03170 YPZ3_0541 YPZ3_RS03170 662284 662817 + secretion monitor gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03170 YPZ3_RS03175 YPZ3_0542 secA secA 662895 665609 + protein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03175 YPZ3_RS03180 YPZ3_0543 YPZ3_RS03180 665904 666290 + nucleoside triphosphate pyrophosphohydrolase gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03180 YPZ3_RS03185 YPZ3_0544 YPZ3_RS03185 666552 667331 - transposase gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03185 YPZ3_RS03190 YPZ3_0545 YPZ3_RS03190 667331 668353 - transposase gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03190 YPZ3_RS03195 YPZ3_RS03195 YPZ3_RS03195 668367 668546 - glutathione S-transferase gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03195 YPZ3_RS03200 YPZ3_0546 YPZ3_RS03200 668632 669027 - membrane protein gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03200 YPZ3_RS03205 YPZ3_RS03205 YPZ3_RS03205 669331 669615 - cell division protein FtsH gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03205 YPZ3_RS03210 YPZ3_0547 YPZ3_RS03210 669612 670007 - membrane protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03210 YPZ3_RS03215 YPZ3_0548 YPZ3_RS03215 670010 670315 - membrane protein gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03215 YPZ3_RS03220 YPZ3_RS03220 YPZ3_RS03220 670320 670466 - hypothetical protein gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03220 YPZ3_RS03225 YPZ3_0549 YPZ3_RS03225 670470 670850 - hypothetical protein gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03225 YPZ3_RS03230 YPZ3_0550 YPZ3_RS03230 671076 671465 - modulator protein MzrA gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03230 YPZ3_RS03235 YPZ3_0551 YPZ3_RS03235 671462 672160 - membrane protein gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03235 YPZ3_RS03240 YPZ3_0552 YPZ3_RS03240 672438 672971 - hypothetical protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03240 YPZ3_RS03245 YPZ3_0553 YPZ3_RS03245 673220 674014 - GntR family transcriptional regulator regulates the expression of uxuBA gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03245 YPZ3_RS03250 YPZ3_0554 YPZ3_RS03250 674277 675578 - hexuronate transporter ExuT involved in the transport of aldohexuronates gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03250 YPZ3_RS03255 YPZ3_RS03255 YPZ3_RS03255 675628 675795 + hypothetical protein gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03255 YPZ3_RS03260 YPZ3_0555 YPZ3_RS03260 676326 677735 + uronate isomerase catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03260 YPZ3_RS03265 YPZ3_0556 YPZ3_RS03265 677934 679385 + altronate oxidoreductase catalyzes the formation of D-tagaturonate from D-altronate gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03265 YPZ3_RS03270 YPZ3_0557 YPZ3_RS03270 679396 680886 + altronate hydrolase gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03270 YPZ3_RS03275 YPZ3_0558 YPZ3_RS03275 681039 681569 + membrane protein gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03275 YPZ3_RS03280 YPZ3_0559 YPZ3_RS03280 681687 682145 - transposase gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03280 YPZ3_RS03285 YPZ3_0560 YPZ3_RS03285 682346 683602 - serine/threonine transporter SstT gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03285 YPZ3_RS03290 YPZ3_0561 YPZ3_RS03290 684137 685132 - oxidoreductase gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03290 YPZ3_RS03295 YPZ3_0562 YPZ3_RS03295 685335 685844 - hypothetical protein gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03295 YPZ3_RS03300 YPZ3_0563 YPZ3_RS03300 686083 688896 - autotransporter gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03300 YPZ3_RS03305 YPZ3_0564 YPZ3_RS03305 689536 690723 + ribosomal RNA large subunit methyltransferase G gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03305 YPZ3_RS03310 YPZ3_0565 fadH fadH 690839 692860 - 2%2C4-dienoyl-CoA reductase catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03310 YPZ3_RS03315 YPZ3_0566 YPZ3_RS03315 693073 693642 - hypothetical protein gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03315 YPZ3_RS03320 YPZ3_RS03320 YPZ3_RS03320 693738 693971 + hypothetical protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03320 YPZ3_RS03325 YPZ3_0567 YPZ3_RS03325 694033 695532 - kinase gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03325 YPZ3_RS03330 YPZ3_0568 YPZ3_RS03330 695564 697297 - hypothetical protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03330 YPZ3_RS03335 YPZ3_0569 YPZ3_RS03335 697353 698336 - hypothetical protein gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03335 YPZ3_RS03340 YPZ3_0570 YPZ3_RS03340 698438 699076 - tellerium resistance protein TerY gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03340 YPZ3_RS03345 YPZ3_0571 YPZ3_RS03345 699078 699719 - tellurium resistance protein TerX gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03345 YPZ3_RS03350 YPZ3_0572 YPZ3_RS03350 699752 700390 - tellerium resistance protein TerY gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03350 YPZ3_RS03355 YPZ3_0573 YPZ3_RS03355 701105 702793 + outer membrane transporter CdiB gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03355 YPZ3_RS03360 YPZ3_0574 YPZ3_RS03360 702838 712725 + toxin CdiA gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03360 YPZ3_RS03365 YPZ3_RS03365 YPZ3_RS03365 712722 712955 + immunity protein CdiI gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03365 YPZ3_RS03370 YPZ3_RS03370 YPZ3_RS03370 713017 713166 + adhesin gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03370 YPZ3_RS03375 YPZ3_RS03375 YPZ3_RS03375 713221 713448 + hypothetical protein gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03375 YPZ3_RS03380 YPZ3_RS03380 YPZ3_RS03380 713529 713960 + hypothetical protein gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03380 YPZ3_RS03385 YPZ3_0575 YPZ3_RS03385 713993 714748 + hemagglutinin gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03385 YPZ3_RS03390 YPZ3_RS03390 YPZ3_RS03390 714812 714976 + adhesin gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03390 YPZ3_RS03395 YPZ3_0576 YPZ3_RS03395 715244 717529 - autotransporter gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03395 YPZ3_RS03400 YPZ3_RS03400 YPZ3_RS03400 717589 718585 - hypothetical protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03400 YPZ3_RS03405 YPZ3_0579 YPZ3_RS03405 718687 720066 - membrane protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03405 YPZ3_RS03410 YPZ3_0580 YPZ3_RS03410 720392 721507 + sugar ABC transporter ATP-binding protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03410 YPZ3_RS03415 YPZ3_0581 YPZ3_RS03415 721590 724943 + hypothetical protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03415 YPZ3_RS03420 YPZ3_0582 YPZ3_RS03420 725052 726038 + LacI family transcriptional regulator gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03420 YPZ3_RS03425 YPZ3_0583 YPZ3_RS03425 726115 727359 + ABC transporter substrate-binding protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03425 YPZ3_RS03430 YPZ3_0584 YPZ3_RS03430 727413 728294 + permease gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03430 YPZ3_RS03435 YPZ3_0585 YPZ3_RS03435 728294 729112 + permease gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03435 YPZ3_RS03440 YPZ3_0586 YPZ3_RS03440 729109 729624 + hypothetical protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03440 YPZ3_RS03445 YPZ3_0587 YPZ3_RS03445 729675 731858 + glycosyl hydrolase gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03445 YPZ3_RS03450 YPZ3_0588 YPZ3_RS03450 731922 733448 - transporter gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03450 YPZ3_RS03455 YPZ3_0589 YPZ3_RS03455 733453 735354 - fusaric acid resistance protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03455 YPZ3_RS03460 YPZ3_0590 YPZ3_RS03460 735338 736387 - multidrug resistance protein MdtN gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03460 YPZ3_RS03465 YPZ3_RS03465 YPZ3_RS03465 736397 736732 - membrane protein gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03465 YPZ3_RS03470 YPZ3_RS03470 YPZ3_RS03470 736729 736929 - hypothetical protein gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03470 YPZ3_RS03475 YPZ3_RS03475 YPZ3_RS03475 737102 737209 - hypothetical protein gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03475 YPZ3_RS03480 YPZ3_RS03480 YPZ3_RS03480 737695 738916 + aminotransferase gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03480 YPZ3_RS03485 YPZ3_0592 YPZ3_RS03485 738909 740360 + sodium:proton antiporter gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03485 YPZ3_RS03490 YPZ3_0593 YPZ3_RS03490 740373 740810 + polyketide cyclase gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03490 YPZ3_RS03495 YPZ3_0594 YPZ3_RS03495 740944 741570 + histidine kinase gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03495 YPZ3_RS03500 YPZ3_0595 YPZ3_RS03500 741586 741966 + reactive intermediate/imine deaminase gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03500 YPZ3_RS03505 YPZ3_0596 YPZ3_RS03505 742251 742655 + enamine deaminase RidA gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03505 YPZ3_RS03510 YPZ3_0597 YPZ3_RS03510 742870 743172 - monooxygenase gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03510 YPZ3_RS03515 YPZ3_0598 YPZ3_RS03515 743432 744148 - protein-disulfide isomerase gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03515 YPZ3_RS03520 YPZ3_0599 YPZ3_RS03520 744310 745242 + LysR family transcriptional regulator gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03520 YPZ3_RS03525 YPZ3_RS03525 YPZ3_RS03525 745693 745896 + hypothetical protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03525 YPZ3_RS03530 YPZ3_RS03530 YPZ3_RS03530 745992 746204 + cell filamentation protein Fic gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03530 YPZ3_RS03535 YPZ3_RS03535 YPZ3_RS03535 746201 746359 - hypothetical protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03535 YPZ3_RS03540 YPZ3_RS03540 YPZ3_RS03540 746557 746757 - hypothetical protein gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03540 YPZ3_RS03545 YPZ3_RS03545 YPZ3_RS03545 746915 747145 + hypothetical protein gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03545 YPZ3_RS03550 YPZ3_0600 YPZ3_RS03550 747278 748660 + HNH endonuclease gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03550 YPZ3_RS03555 YPZ3_0601 YPZ3_RS03555 748669 749139 + hypothetical protein gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03555 YPZ3_RS03560 YPZ3_0602 YPZ3_RS03560 749166 749621 + hypothetical protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03560 YPZ3_RS03565 YPZ3_RS03565 YPZ3_RS03565 749638 749928 + hypothetical protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03565 YPZ3_RS03570 YPZ3_0603 YPZ3_RS03570 749906 750244 + terminase gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03570 YPZ3_RS03575 YPZ3_t5 YPZ3_RS03575 750490 750566 - tRNA-Met tRNA gene713 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03575 YPZ3_RS03580 YPZ3_0604 YPZ3_RS03580 750762 752600 - RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03580 YPZ3_RS03585 YPZ3_0605 dnaG dnaG 752758 754506 - DNA primase synthesizes RNA primers at the replication forks gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03585 YPZ3_RS03590 YPZ3_RS03590 rpsU rpsU 754642 754857 - 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03590 YPZ3_RS03595 YPZ3_0606 YPZ3_RS03595 755263 756276 + tRNA N6-adenosine threonylcarbamoyltransferase universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03595 YPZ3_RS03600 YPZ3_0607 YPZ3_RS03600 756522 757172 - glycerol-3-phosphate acyltransferase involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03600 YPZ3_RS03605 YPZ3_0608 folB folB 757280 757639 + dihydroneopterin triphosphate 2'-epimerase catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03605 YPZ3_RS03610 YPZ3_0609 YPZ3_RS03610 757913 758731 + undecaprenyl-diphosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03610 YPZ3_RS03615 YPZ3_0610 YPZ3_RS03615 758967 760205 - multifunctional CCA protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03615 YPZ3_RS03620 YPZ3_0611 YPZ3_RS03620 760365 760988 - signal transduction protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03620 YPZ3_RS03625 YPZ3_0612 YPZ3_RS03625 761292 762599 + hypothetical protein gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03625 YPZ3_RS03630 YPZ3_0613 YPZ3_RS03630 762770 765625 + glutamate--ammonia-ligase adenylyltransferase catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03630 YPZ3_RS03635 YPZ3_0614 YPZ3_RS03635 765760 767190 + bifunctional protein HldE catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03635 YPZ3_RS03640 YPZ3_0615 YPZ3_RS03640 767227 768477 + transporter uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03640 YPZ3_RS03645 YPZ3_RS03645 YPZ3_RS03645 768802 769083 - hypothetical protein gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03645 YPZ3_RS03650 YPZ3_RS03650 YPZ3_RS03650 769119 769463 - hypothetical protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03650 YPZ3_RS03655 YPZ3_0616 ribB ribB 769652 770305 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase DHBP synthase%3B functions during riboflavin biosynthesis gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03655 YPZ3_RS03660 YPZ3_0617 YPZ3_RS03660 770764 771546 + LigB family dioxygenase seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03660 YPZ3_RS03665 YPZ3_0618 YPZ3_RS03665 771953 773113 - hypothetical protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03665 YPZ3_RS03670 YPZ3_0619 YPZ3_RS03670 773123 773806 - membrane protein gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03670 YPZ3_RS03675 YPZ3_RS03675 YPZ3_RS03675 773875 774045 + hypothetical protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03675 YPZ3_RS03680 YPZ3_0620 YPZ3_RS03680 774110 775507 - outer membrane channel protein gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03680 YPZ3_RS03685 YPZ3_0621 nudF nudF 775903 776535 + ADP-ribose pyrophosphatase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03685 YPZ3_RS03690 YPZ3_0622 YPZ3_RS03690 776569 776994 + dehydrogenase gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03690 YPZ3_RS03695 YPZ3_0623 YPZ3_RS03695 777076 777903 + 3'%2C5'-cyclic-nucleotide phosphodiesterase gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03695 YPZ3_RS03700 YPZ3_0624 YPZ3_RS03700 777903 778484 + esterase Displays esterase activity toward palmitoyl-CoA and pNP-butyrate gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03700 YPZ3_RS03705 YPZ3_0625 YPZ3_RS03705 778586 780481 + DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03705 YPZ3_RS03710 YPZ3_0626 YPZ3_RS03710 780485 781396 + LysR family transcriptional regulator gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03710 YPZ3_RS03715 YPZ3_0627 YPZ3_RS03715 781454 782038 - NADPH quinone reductase MdaB involved in drug resistance gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03715 YPZ3_RS03720 YPZ3_0628 YPZ3_RS03720 782342 784615 + DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03720 YPZ3_RS03725 YPZ3_0629 YPZ3_RS03725 784904 785635 + acyltransferase gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03725 YPZ3_RS03730 YPZ3_0630 YPZ3_RS03730 785814 787238 + cell division protein FtsP septal ring component that protects the divisome from stress gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03730 YPZ3_RS03735 YPZ3_RS03735 YPZ3_RS03735 787546 789890 + YgiQ family radical SAM protein gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03735 YPZ3_RS03740 YPZ3_0633 dkgA dkgA 789912 790745 - 2%2C5-diketo-D-gluconic acid reductase A methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03740 YPZ3_RS03745 YPZ3_RS03745 YPZ3_RS03745 790892 791101 + hypothetical protein gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03745 YPZ3_RS03750 YPZ3_0634 YPZ3_RS03750 791164 792321 - aldehyde oxidoreductase gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03750 YPZ3_RS03755 YPZ3_0635 YPZ3_RS03755 792719 793612 + AraC family transcriptional regulator gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03755 YPZ3_RS03760 YPZ3_0636 YPZ3_RS03760 793704 794366 - membrane protein gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03760 YPZ3_RS03765 YPZ3_0637 YPZ3_RS03765 794559 795770 - cystathionine beta-lyase catalyzes the formation of L-homocysteine from cystathionine gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03765 YPZ3_RS03770 YPZ3_RS03770 YPZ3_RS03770 796567 797280 + biopolymer transporter ExbB membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03770 YPZ3_RS03775 YPZ3_0639 YPZ3_RS03775 797284 797715 + biopolymer transporter ExbD membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03775 YPZ3_RS03780 YPZ3_0640 YPZ3_RS03780 797812 799368 - hypothetical protein gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03780 YPZ3_RS03785 YPZ3_0641 YPZ3_RS03785 799393 799965 - pseudopilin gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03785 YPZ3_RS03790 YPZ3_0642 YPZ3_RS03790 799949 800422 - pilus biosynthesis protein TadE gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03790 YPZ3_RS03795 YPZ3_0643 YPZ3_RS03795 800419 801189 - tight adherance operon protein gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03795 YPZ3_RS03800 YPZ3_0644 YPZ3_RS03800 801173 802006 - tight adherance operon protein gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03800 YPZ3_RS03805 YPZ3_0645 YPZ3_RS03805 802003 802878 - tight adherance operon protein gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03805 YPZ3_RS03810 YPZ3_0646 YPZ3_RS03810 802875 804161 - tight adherance operon protein gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03810 YPZ3_RS03815 YPZ3_0647 YPZ3_RS03815 804173 805300 - pilus assembly protein CpaE gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03815 YPZ3_RS03820 YPZ3_RS03820 YPZ3_RS03820 805311 805601 - hypothetical protein gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03820 YPZ3_RS03825 YPZ3_0648 YPZ3_RS03825 805598 806047 - secretion protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03825 YPZ3_RS03830 YPZ3_0649 YPZ3_RS03830 806062 806916 - pilus assembly protein CpaC gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03830 YPZ3_RS03835 YPZ3_0650 YPZ3_RS03835 806913 807779 - tight adherance operon protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03835 YPZ3_RS03840 YPZ3_0651 YPZ3_RS03840 807831 808253 - tight adherance operon protein gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03840 YPZ3_RS03845 YPZ3_0652 YPZ3_RS03845 808453 808911 + transposase gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03845 YPZ3_RS03850 YPZ3_RS03850 YPZ3_RS03850 809001 809174 + invasin gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03850 YPZ3_RS03855 YPZ3_0653 YPZ3_RS03855 809164 809622 + transposase gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03855 YPZ3_RS03860 YPZ3_0654 YPZ3_RS03860 809975 812455 + outer membrane usher protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03860 YPZ3_RS03865 YPZ3_0655 YPZ3_RS03865 812473 813192 + fimbrial chaperone protein gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03865 YPZ3_RS03870 YPZ3_0656 YPZ3_RS03870 813217 814323 + fimbrial protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03870 YPZ3_RS03875 YPZ3_0657 YPZ3_RS03875 814535 815614 - iron ABC transporter substrate-binding protein gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03875 YPZ3_RS03880 YPZ3_0658 YPZ3_RS03880 816470 817465 + hypothetical protein gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03880 YPZ3_RS03885 YPZ3_RS03885 YPZ3_RS03885 817557 818126 - lipoprotein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03885 YPZ3_RS03890 YPZ3_RS03890 YPZ3_RS03890 818338 820435 - flagellar biosynthesis protein FlhA gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03890 YPZ3_RS03895 YPZ3_0661 YPZ3_RS03895 820422 821555 - flagellar biosynthesis protein FlhB gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03895 YPZ3_RS03900 YPZ3_0662 YPZ3_RS03900 821555 822328 - flagellar biosynthesis protein FliR gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03900 YPZ3_RS03905 YPZ3_RS03905 YPZ3_RS03905 822335 822607 - flagellar biosynthesis protein FliQ gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03905 YPZ3_RS03910 YPZ3_0663 YPZ3_RS03910 822609 823379 - flagellar biosynthesis protein FliP gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03910 YPZ3_RS03915 YPZ3_0664 YPZ3_RS03915 823376 823789 - flagellar motor switch protein FliN gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03915 YPZ3_RS03920 YPZ3_0665 YPZ3_RS03920 823782 824681 - flagellar motor switch protein FliM gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03920 YPZ3_RS03925 YPZ3_0666 YPZ3_RS03925 825204 826232 + Fis family transcriptional regulator gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03925 YPZ3_RS03930 YPZ3_0667 YPZ3_RS03930 826249 826629 + flagellar hook-basal body protein FliE gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03930 YPZ3_RS03935 YPZ3_0668 fliF fliF 826639 828279 + flagellar M-ring protein FliF the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03935 YPZ3_RS03940 YPZ3_0669 fliG fliG 828251 829294 + flagellar motor switch protein FliG One of three proteins involved in switching the direction of the flagellar rotation gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03940 YPZ3_RS03945 YPZ3_0670 fliH fliH 829299 830015 + flagellar assembly protein FliH binds to and inhibits the function of flagella specific ATPase FliI gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03945 YPZ3_RS03950 YPZ3_0671 YPZ3_RS03950 830008 831348 + flagellum-specific ATP synthase gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03950 YPZ3_RS03955 YPZ3_0672 YPZ3_RS03955 831352 831789 + flagellar export protein FliJ gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03955 YPZ3_RS03960 YPZ3_0673 YPZ3_RS03960 832117 832542 - flagellar protein FlgN gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03960 YPZ3_RS03965 YPZ3_RS03965 YPZ3_RS03965 832549 832815 - flagellar biosynthesis protein FlgM gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03965 YPZ3_RS03970 YPZ3_0674 flgA flgA 833044 833892 - flagellar basal body P-ring biosynthesis protein FlgA required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03970 YPZ3_RS03975 YPZ3_0675 flgB flgB 833950 834396 + flagellar biosynthesis protein FlgB with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03975 YPZ3_RS03980 YPZ3_0676 YPZ3_RS03980 834399 834824 + flagellar basal body rod protein FlgC gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03980 YPZ3_RS03985 YPZ3_0677 flgD flgD 834827 835483 + flagellar basal body rod modification protein FlgD acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03985 YPZ3_RS03990 YPZ3_0678 flgE flgE 835538 836779 + flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03990 YPZ3_RS03995 YPZ3_RS03995 YPZ3_RS03995 836779 836967 + flagellar basal-body rod protein FlgF gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS03995 YPZ3_RS04000 YPZ3_0679 YPZ3_RS04000 837003 837461 - transposase gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04000 YPZ3_RS04005 YPZ3_RS04005 YPZ3_RS04005 837451 837624 - transposase gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04005 YPZ3_RS04010 YPZ3_0680 YPZ3_RS04010 837628 838221 + flagellar basal body rod protein FlgF gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04010 YPZ3_RS04015 YPZ3_0681 flgG flgG 838289 839074 + flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04015 YPZ3_RS04020 YPZ3_0682 flgH flgH 839109 839774 + flagellar L-ring protein FlgH part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04020 YPZ3_RS04025 YPZ3_0683 YPZ3_RS04025 839821 840964 + flagellar biosynthesis protein FlgI gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04025 YPZ3_RS04030 YPZ3_RS04030 flgJ flgJ 840974 841267 + peptidoglycan hydrolase FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04030 YPZ3_RS04035 YPZ3_0684 flgK flgK 841380 842741 + flagellar hook protein FlgK with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04035 YPZ3_RS04040 YPZ3_0685 flgL flgL 842770 843693 + flagellar hook-associated protein FlgL with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04040 YPZ3_RS04045 YPZ3_0686 YPZ3_RS04045 843705 844718 + flagellar hook associated protein lafW gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04045 YPZ3_RS04050 YPZ3_0687 YPZ3_RS04050 844882 845328 - hypothetical protein gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04050 YPZ3_RS04055 YPZ3_0688 YPZ3_RS04055 845309 846355 - hypothetical protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04055 YPZ3_RS04060 YPZ3_0689 YPZ3_RS04060 846981 848195 + flagellin gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04060 YPZ3_RS04065 YPZ3_0690 YPZ3_RS04065 848710 849909 + flagellin gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04065 YPZ3_RS04070 YPZ3_0691 YPZ3_RS04070 850192 851397 + flagellin gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04070 YPZ3_RS04075 YPZ3_0692 YPZ3_RS04075 851617 852894 + flagellar hook-associated protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04075 YPZ3_RS04080 YPZ3_0693 YPZ3_RS04080 852904 853284 + flagellar export chaperone FliS gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04080 YPZ3_RS04085 YPZ3_0694 YPZ3_RS04085 853286 853612 + flagellar protein lafD gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04085 YPZ3_RS04090 YPZ3_0695 YPZ3_RS04090 853614 854795 + flagellar hook-length control protein gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04090 YPZ3_RS04095 YPZ3_0696 YPZ3_RS04095 854834 855304 + flagellar protein gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04095 YPZ3_RS04100 YPZ3_0697 YPZ3_RS04100 855310 856005 + DNA-directed RNA polymerase sigma-70 factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04100 YPZ3_RS04105 YPZ3_0698 YPZ3_RS04105 856021 856887 + flagellar motor protein MotA With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04105 YPZ3_RS04110 YPZ3_0699 YPZ3_RS04110 856887 857798 + flagellar motor protein B gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04110 YPZ3_RS04115 YPZ3_RS04115 YPZ3_RS04115 857867 858055 + hypothetical protein gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04115 YPZ3_RS04120 YPZ3_0700 YPZ3_RS04120 858258 858854 + hypothetical protein gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04120 YPZ3_RS04125 YPZ3_0701 YPZ3_RS04125 858851 859306 + membrane protein gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04125 YPZ3_RS04130 YPZ3_RS04130 YPZ3_RS04130 859404 859661 + membrane protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04130 YPZ3_RS04135 YPZ3_RS04135 YPZ3_RS04135 859814 860282 - hypothetical protein gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04135 YPZ3_RS04140 YPZ3_RS04140 YPZ3_RS04140 860532 860834 - membrane protein gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04140 YPZ3_RS04145 YPZ3_0702 YPZ3_RS04145 861435 861950 + transposase gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04145 YPZ3_RS04150 YPZ3_0703 YPZ3_RS04150 862004 862789 + integrase gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04150 YPZ3_RS04155 YPZ3_0704 YPZ3_RS04155 862985 865351 - diguanylate cyclase gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04155 YPZ3_RS04160 YPZ3_RS04160 YPZ3_RS04160 865355 865552 - membrane protein gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04160 YPZ3_RS04165 YPZ3_0705 YPZ3_RS04165 865991 867268 + hemolysin secretion protein D gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04165 YPZ3_RS04170 YPZ3_0706 YPZ3_RS04170 867281 870400 + multidrug RND transporter gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04170 YPZ3_RS04175 YPZ3_0707 YPZ3_RS04175 870535 872025 - enterotoxin gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04175 YPZ3_RS04180 YPZ3_0708 YPZ3_RS04180 872303 872890 + hypothetical protein gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04180 YPZ3_RS04185 YPZ3_0709 YPZ3_RS04185 873744 884861 + autotransporter gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04185 YPZ3_RS04190 YPZ3_0710 YPZ3_RS04190 884964 886844 - hypothetical protein gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04190 YPZ3_RS04195 YPZ3_0711 YPZ3_RS04195 887407 888282 - hypothetical protein gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04195 YPZ3_RS04200 YPZ3_0712 YPZ3_RS04200 888490 890307 - hypothetical protein gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04200 YPZ3_RS04205 YPZ3_0713 YPZ3_RS04205 891026 892582 + aminobenzoyl-glutamate transporter gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04205 YPZ3_RS04210 YPZ3_0714 YPZ3_RS04210 892660 893892 + peptidase T catalyzes the release of the N-terminal amino acid from a tripeptide gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04210 YPZ3_RS04215 YPZ3_0715 YPZ3_RS04215 894280 896352 + ligand-gated channel gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04215 YPZ3_RS04220 YPZ3_0716 YPZ3_RS04220 896503 899915 + peptide synthetase gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04220 YPZ3_RS04225 YPZ3_0718 YPZ3_RS04225 899929 900951 + transposase gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04225 YPZ3_RS04230 YPZ3_0719 YPZ3_RS04230 900951 901730 + transposase gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04230 YPZ3_RS04235 YPZ3_0720 YPZ3_RS04235 901938 908396 + non-ribosomal peptide synthetase gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04235 YPZ3_RS04240 YPZ3_0721 YPZ3_RS04240 908404 910092 + high molecular weight siderophore biosynthesis protein gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04240 YPZ3_RS04245 YPZ3_0722 YPZ3_RS04245 910105 915924 + non-ribosomal peptide synthetase gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04245 YPZ3_RS04250 YPZ3_0723 YPZ3_RS04250 915921 916997 + saccharopine dehydrogenase gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04250 YPZ3_RS04255 YPZ3_0724 YPZ3_RS04255 916994 918121 + thiazolinyl imide reductase gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04255 YPZ3_RS04260 YPZ3_0725 YPZ3_RS04260 918114 918878 + thioesterase gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04260 YPZ3_RS04265 YPZ3_0726 YPZ3_RS04265 918868 920172 + MFS transporter gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04265 YPZ3_RS04270 YPZ3_0727 YPZ3_RS04270 920172 921944 + multidrug ABC transporter permease gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04270 YPZ3_RS04275 YPZ3_0728 YPZ3_RS04275 921937 923694 + sulfate ABC transporter permease gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04275 YPZ3_RS04280 YPZ3_0729 YPZ3_RS04280 924017 924892 - hypothetical protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04280 YPZ3_RS04285 YPZ3_0730 YPZ3_RS04285 925328 925726 - hypothetical protein gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04285 YPZ3_RS04290 YPZ3_0731 YPZ3_RS04290 927266 928609 + idonate transporter gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04290 YPZ3_RS04295 YPZ3_0732 YPZ3_RS04295 929610 931268 + hypothetical protein gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04295 YPZ3_RS04300 YPZ3_0733 YPZ3_RS04300 931373 933373 + adhesin gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04300 YPZ3_RS04305 YPZ3_0734 YPZ3_RS04305 934029 937799 + autotransporter gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04305 YPZ3_RS04310 YPZ3_0735 YPZ3_RS04310 938385 940610 + type VI secretion protein Vgr gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04310 YPZ3_RS04315 YPZ3_0736 YPZ3_RS04315 940636 941955 + hypothetical protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04315 YPZ3_RS04320 YPZ3_0737 YPZ3_RS04320 941969 946285 + type IV secretion protein Rhs gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04320 YPZ3_RS04325 YPZ3_RS04325 YPZ3_RS04325 946560 946802 + hypothetical protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04325 YPZ3_RS04330 YPZ3_0738 YPZ3_RS04330 947346 947759 + hypothetical protein gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04330 YPZ3_RS04335 YPZ3_0739 YPZ3_RS04335 947939 949309 - transporter divalent anion:Na+ symporter (DASS) family gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04335 YPZ3_RS04340 YPZ3_0740 YPZ3_RS04340 949591 950610 - LacI family transcriptional regulator gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04340 YPZ3_RS04345 YPZ3_RS04345 YPZ3_RS04345 950904 952067 + hypothetical protein gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04345 YPZ3_RS04350 YPZ3_RS04350 YPZ3_RS04350 952144 952742 - transposase gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04350 YPZ3_RS04355 YPZ3_RS04355 YPZ3_RS04355 952796 953419 - transposase gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04355 YPZ3_RS04360 YPZ3_0743 YPZ3_RS04360 953583 955007 + sodium:galactoside symporter gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04360 YPZ3_RS04365 YPZ3_0744 YPZ3_RS04365 955266 957446 - ligand-gated channel protein gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04365 YPZ3_RS04370 YPZ3_0745 YPZ3_RS04370 957518 958846 - lysine 6-monooxygenase gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04370 YPZ3_RS04375 YPZ3_0746 YPZ3_RS04375 958843 960591 - aerobactin synthase IucC gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04375 YPZ3_RS04380 YPZ3_0747 YPZ3_RS04380 960588 961538 - N(6)-hydroxylysine O-acetyltransferase gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04380 YPZ3_RS04385 YPZ3_0748 YPZ3_RS04385 961522 962592 - aerobactin siderophore biosynthesis proteiniucA gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04385 YPZ3_RS04390 YPZ3_0749 YPZ3_RS04390 962685 963293 - hypothetical protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04390 YPZ3_RS04395 YPZ3_0750 YPZ3_RS04395 963433 964656 + MFS transporter gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04395 YPZ3_RS04400 YPZ3_0751 YPZ3_RS04400 964946 965779 - dioxygenase gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04400 YPZ3_RS04405 YPZ3_0752 YPZ3_RS04405 966156 967532 - peptidase gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04405 YPZ3_RS04410 YPZ3_0753 YPZ3_RS04410 968094 968837 + LuxR family transcriptional regulator gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04410 YPZ3_RS04415 YPZ3_0754 YPZ3_RS04415 968818 969468 - acyl-homoserine-lactone synthase gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04415 YPZ3_RS04420 YPZ3_RS04420 YPZ3_RS04420 970643 971293 + CAAX amino protease gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04420 YPZ3_RS04425 YPZ3_RS04425 YPZ3_RS04425 971744 972139 + lipoprotein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04425 YPZ3_RS04430 YPZ3_RS04430 YPZ3_RS04430 972207 972470 + transposase gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04430 YPZ3_RS04435 YPZ3_RS04435 YPZ3_RS04435 972644 973015 + hypothetical protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04435 YPZ3_RS04440 YPZ3_RS04440 YPZ3_RS04440 973058 973213 + hypothetical protein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04440 YPZ3_RS04445 YPZ3_0756 YPZ3_RS04445 974415 974915 + hypothetical protein gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04445 YPZ3_RS04450 YPZ3_0757 YPZ3_RS04450 974958 976508 + hypothetical protein gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04450 YPZ3_RS04455 YPZ3_0758 YPZ3_RS04455 976520 977872 + hypothetical protein gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04455 YPZ3_RS04460 YPZ3_0759 YPZ3_RS04460 977869 978555 + hypothetical protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04460 YPZ3_RS04465 YPZ3_0760 YPZ3_RS04465 978555 980291 + membrane protein gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04465 YPZ3_RS04470 YPZ3_0761 YPZ3_RS04470 980295 980786 + hypothetical protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04470 YPZ3_RS04475 YPZ3_0762 YPZ3_RS04475 981174 983816 + ATPase gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04475 YPZ3_RS04480 YPZ3_0763 YPZ3_RS04480 983819 986167 + type IV secretion protein Rhs gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04480 YPZ3_RS04485 YPZ3_0764 YPZ3_RS04485 986183 988480 + membrane protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04485 YPZ3_RS04490 YPZ3_0765 YPZ3_RS04490 988467 989234 + hypothetical protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04490 YPZ3_RS04495 YPZ3_RS04495 YPZ3_RS04495 989483 989605 + transposase gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04495 YPZ3_RS04500 YPZ3_0766 YPZ3_RS04500 989659 990027 + transposase gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04500 YPZ3_RS04505 YPZ3_0767 YPZ3_RS04505 990635 991270 + type IV secretion protein Rhs gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04505 YPZ3_RS04510 YPZ3_RS04510 YPZ3_RS04510 991456 991602 + integrase gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04510 YPZ3_RS04515 YPZ3_t6 YPZ3_RS04515 991855 991930 - tRNA-Phe tRNA gene901 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04515 YPZ3_RS04520 YPZ3_0768 YPZ3_RS04520 992599 994761 + ornithine decarboxylase gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04520 YPZ3_RS04525 YPZ3_0769 YPZ3_RS04525 995317 996276 + sugar ABC transporter substrate-binding protein gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04525 YPZ3_RS04530 YPZ3_0770 YPZ3_RS04530 996322 997821 + lantibiotic ABC transporter permease gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04530 YPZ3_RS04535 YPZ3_0771 YPZ3_RS04535 997902 998837 + sugar ABC transporter permease gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04535 YPZ3_RS04540 YPZ3_0772 YPZ3_RS04540 998920 1000953 - TonB-dependent receptor gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04540 YPZ3_RS04545 YPZ3_0773 YPZ3_RS04545 1001057 1002157 - ABC transporter substrate-binding protein gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04545 YPZ3_RS04550 YPZ3_0774 mltC mltC 1002457 1003533 - murein transglycosylase Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04550 YPZ3_RS04555 YPZ3_RS04555 YPZ3_RS04555 1003716 1003988 - Fe(2+)-trafficking protein protects iron-sulfur proteins against oxidative damage gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04555 YPZ3_RS04560 YPZ3_0775 YPZ3_RS04560 1004166 1005281 - A/G-specific adenine glycosylase gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04560 YPZ3_RS04565 YPZ3_0776 trmB trmB 1005619 1006338 + tRNA (guanine-N(7)-)-methyltransferase tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04565 YPZ3_RS04570 YPZ3_0777 YPZ3_RS04570 1006338 1006664 + hypothetical protein gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04570 YPZ3_RS04575 YPZ3_0778 YPZ3_RS04575 1006775 1007701 + glutaminase catalyzes the formation of glutamate from glutamine gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04575 YPZ3_RS04580 YPZ3_0779 YPZ3_RS04580 1007813 1008343 + hypothetical protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04580 YPZ3_RS04585 YPZ3_RS04585 YPZ3_RS04585 1008316 1008546 + hypothetical protein gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04585 YPZ3_RS04590 YPZ3_0780 YPZ3_RS04590 1009046 1018378 + phage minor structural protein gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04590 YPZ3_RS04595 YPZ3_0781 YPZ3_RS04595 1018568 1019698 - coproporphyrinogen III oxidase gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04595 YPZ3_RS04600 YPZ3_0782 YPZ3_RS04600 1019691 1020284 - non-canonical purine NTP pyrophosphatase HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04600 YPZ3_RS04605 YPZ3_0783 YPZ3_RS04605 1020384 1020674 - hypothetical protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04605 YPZ3_RS04610 YPZ3_0784 YPZ3_RS04610 1020671 1021225 - hypothetical protein gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04610 YPZ3_RS04615 YPZ3_0785 YPZ3_RS04615 1021513 1022334 - pyrroline-5-carboxylate reductase gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04615 YPZ3_RS04620 YPZ3_0786 YPZ3_RS04620 1022467 1023165 - YggS family pyridoxal phosphate enzyme gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04620 YPZ3_RS04625 YPZ3_0787 YPZ3_RS04625 1023185 1024309 + hypothetical protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04625 YPZ3_RS04630 YPZ3_0788 YPZ3_RS04630 1024418 1025533 - agmatine deiminase catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04630 YPZ3_RS04635 YPZ3_0789 YPZ3_RS04635 1025537 1026421 - N-carbamoylputrescine amidase gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04635 YPZ3_RS04640 YPZ3_0790 YPZ3_RS04640 1026601 1027023 - Holliday junction DNA helicase similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04640 YPZ3_RS04645 YPZ3_0791 YPZ3_RS04645 1027023 1027586 - hypothetical protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04645 YPZ3_RS04650 YPZ3_0792 YPZ3_RS04650 1027702 1028661 - glutathione synthetase catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04650 YPZ3_RS04655 YPZ3_0793 YPZ3_RS04655 1028687 1029418 - 16S rRNA methyltransferase gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04655 YPZ3_RS04660 YPZ3_0794 YPZ3_RS04660 1029670 1030377 - endonuclease gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04660 YPZ3_RS04665 YPZ3_0795 YPZ3_RS04665 1030475 1030987 - Zn-dependent metalloprotease gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04665 YPZ3_RS04670 YPZ3_0796 YPZ3_RS04670 1031180 1032334 - S-adenosylmethionine synthase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04670 YPZ3_RS04675 YPZ3_0797 YPZ3_RS04675 1033541 1035520 + biosynthetic arginine decarboxylase catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04675 YPZ3_RS04680 YPZ3_0798 YPZ3_RS04680 1035680 1036000 + (2Fe-2S)-binding protein gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04680 YPZ3_RS04685 YPZ3_0799 YPZ3_RS04685 1036290 1037042 - lipoprotein gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04685 YPZ3_RS04690 YPZ3_0800 YPZ3_RS04690 1037533 1039527 + transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04690 YPZ3_RS04695 YPZ3_0801 YPZ3_RS04695 1039835 1040293 + transposase gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04695 YPZ3_RS04700 YPZ3_0802 gapA gapA 1040634 1041650 + D-erythrose-4-phosphate dehydrogenase required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04700 YPZ3_RS04705 YPZ3_0803 YPZ3_RS04705 1041753 1042916 + phosphoglycerate kinase gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04705 YPZ3_RS04710 YPZ3_0804 YPZ3_RS04710 1043036 1044115 + fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04710 YPZ3_RS04715 YPZ3_RS04715 YPZ3_RS04715 1044147 1044437 - gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04715 YPZ3_RS04720 YPZ3_0805 YPZ3_RS04720 1044553 1045422 + mechanosensitive ion channel protein MscS participates in the regulation of osmotic pressure changes within the cel gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04720 YPZ3_RS04725 YPZ3_0806 YPZ3_RS04725 1045685 1046302 + arginine exporter protein ArgO Involved in the export of arginine gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04725 YPZ3_RS04730 YPZ3_0807 YPZ3_RS04730 1046492 1047271 + hypothetical protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04730 YPZ3_RS04735 YPZ3_0808 YPZ3_RS04735 1047282 1048190 - chromosome initiation inhibitor specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04735 YPZ3_RS04740 YPZ3_0809 YPZ3_RS04740 1048532 1049188 + ribose-5-phosphate isomerase A 1 catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04740 YPZ3_RS04745 YPZ3_0810 YPZ3_RS04745 1049495 1050736 + D-3-phosphoglycerate dehydrogenase catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04745 YPZ3_RS04750 YPZ3_0811 YPZ3_RS04750 1051001 1051597 - 5-formyltetrahydrofolate cyclo-ligase ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04750 YPZ3_RS04755 YPZ3_0812 YPZ3_RS04755 1051961 1052290 - cell division protein ZapA gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04755 YPZ3_RS04760 YPZ3_0813 YPZ3_RS04760 1052627 1053205 + hypothetical protein the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04760 YPZ3_RS04765 YPZ3_0814 YPZ3_RS04765 1053293 1054606 + proline aminopeptidase P II exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04765 YPZ3_RS04770 YPZ3_0815 YPZ3_RS04770 1054675 1055853 + 2-octaprenyl-6-methoxyphenyl hydroxylase Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04770 YPZ3_RS04775 YPZ3_0816 YPZ3_RS04775 1056026 1057246 + 2-octaprenyl-6-methoxyphenyl hydroxylase gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04775 YPZ3_RS04780 YPZ3_0817 gcvT gcvT 1057967 1059064 + aminomethyltransferase catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04780 YPZ3_RS04785 YPZ3_0818 YPZ3_RS04785 1059133 1059519 + glycine cleavage system protein H part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04785 YPZ3_RS04790 YPZ3_0819 YPZ3_RS04790 1059731 1062610 + glycine dehydrogenase (decarboxylating) acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04790 YPZ3_RS04795 YPZ3_0820 YPZ3_RS04795 1062988 1063425 + hypothetical protein gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04795 YPZ3_RS04800 YPZ3_RS04800 YPZ3_RS04800 1064486 1064638 + hemagglutinin gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04800 YPZ3_RS04805 YPZ3_0821 YPZ3_RS04805 1064635 1066611 + membrane protein gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04805 YPZ3_RS04810 YPZ3_0822 YPZ3_RS04810 1066715 1067818 + hypothetical protein gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04810 YPZ3_RS04815 YPZ3_0823 YPZ3_RS04815 1068020 1068721 + hemolysin III gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04815 YPZ3_RS04820 YPZ3_0824 YPZ3_RS04820 1068979 1069476 + membrane protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04820 YPZ3_RS04825 YPZ3_0825 ygfZ ygfZ 1069549 1070541 - tRNA-modifying protein YgfZ physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04825 YPZ3_RS04830 YPZ3_RS04830 YPZ3_RS04830 1070858 1071124 + hypothetical protein gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04830 YPZ3_RS04835 YPZ3_0826 YPZ3_RS04835 1071105 1071530 + membrane protein gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04835 YPZ3_RS04840 YPZ3_0827 YPZ3_RS04840 1071530 1072228 + two-component system response regulator response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04840 YPZ3_RS04845 YPZ3_0828 YPZ3_RS04845 1072253 1073671 + two-component system sensor histidine kinase part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04845 YPZ3_RS04850 YPZ3_0829 YPZ3_RS04850 1073792 1075249 + membrane protein gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04850 YPZ3_RS04855 YPZ3_0830 YPZ3_RS04855 1075339 1075857 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04855 YPZ3_RS04860 YPZ3_0831 xerD xerD 1075964 1076863 + tyrosine recombinase XerD site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04860 YPZ3_RS04865 YPZ3_0832 YPZ3_RS04865 1076894 1077610 + thiol:disulfide interchange protein DsbC DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04865 YPZ3_RS04870 YPZ3_0833 YPZ3_RS04870 1077617 1079350 + ssDNA exonuclease RecJ 5'-3' single-stranded-DNA-specific exonuclease gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04870 YPZ3_RS04875 YPZ3_0834 YPZ3_RS04875 1079695 1080627 + peptide chain release factor 2 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04875 YPZ3_RS04880 YPZ3_0835 lysS lysS 1080637 1082154 + lysine--tRNA ligase class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04880 YPZ3_RS04885 YPZ3_t7 YPZ3_RS04885 1082348 1082421 + tRNA-Gly tRNA gene975 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04885 YPZ3_RS04890 YPZ3_0836 YPZ3_RS04890 1082587 1083801 + integrase gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04890 YPZ3_RS04895 YPZ3_RS04895 YPZ3_RS04895 1083883 1084068 - hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04895 YPZ3_RS04900 YPZ3_RS04900 YPZ3_RS04900 1084169 1084294 - hypothetical protein gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04900 YPZ3_RS04905 YPZ3_RS04905 YPZ3_RS04905 1084666 1084926 + hypothetical protein gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04905 YPZ3_RS04910 YPZ3_0837 YPZ3_RS04910 1084989 1085351 + 2-hydroxyacid dehydrogenase gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04910 YPZ3_RS04915 YPZ3_RS04915 YPZ3_RS04915 1085515 1085811 + hypothetical protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04915 YPZ3_RS04920 YPZ3_0838 YPZ3_RS04920 1085811 1086209 + antitoxin gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04920 YPZ3_RS04925 YPZ3_0839 YPZ3_RS04925 1086609 1088900 - DNA primase gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04925 YPZ3_RS04930 YPZ3_0840 YPZ3_RS04930 1089200 1089526 + hypothetical protein gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04930 YPZ3_RS04935 YPZ3_RS04935 YPZ3_RS04935 1089519 1089671 + hypothetical protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04935 YPZ3_RS04940 YPZ3_RS04940 YPZ3_RS04940 1089685 1089885 - hypothetical protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04940 YPZ3_RS04945 YPZ3_0841 YPZ3_RS04945 1090067 1090399 - hypothetical protein gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04945 YPZ3_RS04950 YPZ3_RS04950 YPZ3_RS04950 1090405 1090641 - hypothetical protein gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04950 YPZ3_RS04955 YPZ3_0842 YPZ3_RS04955 1090654 1091019 - hypothetical protein gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04955 YPZ3_RS04960 YPZ3_0843 YPZ3_RS04960 1091288 1092430 + Fic family protein gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04960 YPZ3_RS04965 YPZ3_0844 YPZ3_RS04965 1092937 1094475 + hypothetical protein gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04965 YPZ3_RS04970 YPZ3_RS04970 YPZ3_RS04970 1094472 1094666 + hypothetical protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04970 YPZ3_RS04975 YPZ3_RS04975 YPZ3_RS04975 1095039 1095242 + hypothetical protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04975 YPZ3_RS04980 YPZ3_RS04980 YPZ3_RS04980 1095289 1095573 + colicin immunity protein gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04980 YPZ3_RS04985 YPZ3_0845 YPZ3_RS04985 1095983 1098142 + hypothetical protein gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04985 YPZ3_RS04990 YPZ3_0846 YPZ3_RS04990 1098112 1098879 + hypothetical protein gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04990 YPZ3_RS04995 YPZ3_RS04995 YPZ3_RS04995 1099191 1099403 + membrane protein gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS04995 YPZ3_RS05000 YPZ3_0847 YPZ3_RS05000 1099484 1100263 + membrane protein gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05000 YPZ3_RS05005 YPZ3_0848 YPZ3_RS05005 1100519 1100785 + hypothetical protein gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05005 YPZ3_RS05010 YPZ3_0849 YPZ3_RS05010 1100868 1101188 - hypothetical protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05010 YPZ3_RS05015 YPZ3_0850 YPZ3_RS05015 1101188 1101868 - PadR family transcriptional regulator gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05015 YPZ3_RS05020 YPZ3_0851 YPZ3_RS05020 1102292 1103149 - hypothetical protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05020 YPZ3_RS05025 YPZ3_0852 YPZ3_RS05025 1103525 1104043 - hypothetical protein gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05025 YPZ3_RS05030 YPZ3_0853 YPZ3_RS05030 1104822 1105823 - sugar ABC transporter substrate-binding protein gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05030 YPZ3_RS05035 YPZ3_0854 YPZ3_RS05035 1106258 1107262 - sugar ABC transporter permease gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05035 YPZ3_RS05040 YPZ3_0855 YPZ3_RS05040 1107334 1108842 - enolase with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05040 YPZ3_RS05045 YPZ3_0856 YPZ3_RS05045 1109391 1110491 - sugar ABC transporter ATP-binding protein gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05045 YPZ3_RS05050 YPZ3_0857 YPZ3_RS05050 1110854 1112089 + cyclodextrin-binding protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05050 YPZ3_RS05055 YPZ3_0858 YPZ3_RS05055 1112249 1113556 + arabinogalactan ABC transporter permease gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05055 YPZ3_RS05060 YPZ3_0859 YPZ3_RS05060 1113568 1114419 + arabinogalactan ABC transporter permease gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05060 YPZ3_RS05065 YPZ3_0860 YPZ3_RS05065 1114424 1115626 + galactosidase gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05065 YPZ3_RS05070 YPZ3_0861 YPZ3_RS05070 1115677 1117737 + beta-galactosidase gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05070 YPZ3_RS05075 YPZ3_0862 YPZ3_RS05075 1117849 1118160 + PTS sugar transporter gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05075 YPZ3_RS05080 YPZ3_0863 YPZ3_RS05080 1118533 1119792 - maltoporin porin involved in the transport of maltose and maltodextrins gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05080 YPZ3_RS05085 YPZ3_0864 lacI lacI 1120064 1121137 + lac repressor transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05085 YPZ3_RS05090 YPZ3_0865 YPZ3_RS05090 1121482 1123857 - alpha-glucosidase gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05090 YPZ3_RS05095 YPZ3_0866 YPZ3_RS05095 1124008 1125315 - sugar transporter involved in the transport of aldohexuronates gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05095 YPZ3_RS05100 YPZ3_0867 YPZ3_RS05100 1125709 1126791 + cytochrome C peroxidase gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05100 YPZ3_RS05105 YPZ3_RS05105 YPZ3_RS05105 1126781 1127062 + hypothetical protein gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05105 YPZ3_RS05110 YPZ3_0868 YPZ3_RS05110 1127032 1127610 - thiamine biogenesis protein ThiJ gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05110 YPZ3_RS05115 YPZ3_0869 gatY gatY 1127634 1128488 - fructose-bisphosphate aldolase catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05115 YPZ3_RS05120 YPZ3_0870 YPZ3_RS05120 1128597 1130084 - hypothetical protein gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05120 YPZ3_RS05125 YPZ3_0871 YPZ3_RS05125 1130207 1131814 - sulfatase gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05125 YPZ3_RS05130 YPZ3_0872 YPZ3_RS05130 1131835 1133061 - anaerobic sulfatase maturase gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05130 YPZ3_RS05135 YPZ3_0873 YPZ3_RS05135 1133305 1134363 - glycosyl hydrolase family 88 gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05135 YPZ3_RS05140 YPZ3_0874 YPZ3_RS05140 1134379 1135134 - 2-deoxy-D-gluconate 3-dehydrogenase catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05140 YPZ3_RS05145 YPZ3_0875 YPZ3_RS05145 1135330 1136496 - N-acetylglucosamine-6-phosphate deacetylase gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05145 YPZ3_RS05150 YPZ3_0876 YPZ3_RS05150 1136499 1136939 - PTS mannose transporter subunit IIA gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05150 YPZ3_RS05155 YPZ3_0877 YPZ3_RS05155 1137025 1137915 - PTS N-acetylgalactosamine transporter subunit IID catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05155 YPZ3_RS05160 YPZ3_0878 YPZ3_RS05160 1137905 1138693 - PTS acetylgalactosamine transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05160 YPZ3_RS05165 YPZ3_0879 YPZ3_RS05165 1138740 1139237 - PTS N-acetylgalactosamine transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05165 YPZ3_RS05170 YPZ3_0880 YPZ3_RS05170 1139255 1140421 - aldose isomerase gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05170 YPZ3_RS05175 YPZ3_0881 YPZ3_RS05175 1140418 1141716 - tagatose 6-phosphate kinase with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05175 YPZ3_RS05180 YPZ3_0882 YPZ3_RS05180 1141766 1142542 - DeoR family transcriptional regulator transcriptional repressor for the agaZVWA and agaSYBCDI operons gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05180 YPZ3_RS05185 YPZ3_0883 YPZ3_RS05185 1143382 1144935 + sulfatase gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05185 YPZ3_RS05190 YPZ3_0884 YPZ3_RS05190 1145387 1145821 - transposase gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05190 YPZ3_RS05195 YPZ3_0885 YPZ3_RS05195 1145878 1146900 + transposase gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05195 YPZ3_RS05200 YPZ3_0886 YPZ3_RS05200 1146900 1147679 + transposase gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05200 YPZ3_RS05205 YPZ3_0887 YPZ3_RS05205 1148024 1151137 - chondroitin ABC lyase gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05205 YPZ3_RS05210 YPZ3_0888 YPZ3_RS05210 1151207 1153393 - autotransporter gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05210 YPZ3_RS05215 YPZ3_0889 YPZ3_RS05215 1153508 1154458 - hypothetical protein gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05215 YPZ3_RS05220 YPZ3_RS05220 YPZ3_RS05220 1154480 1154674 - hypothetical protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05220 YPZ3_RS05225 YPZ3_RS05225 YPZ3_RS05225 1155061 1155249 - hypothetical protein gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05225 YPZ3_RS05230 YPZ3_0890 YPZ3_RS05230 1155745 1156500 + carbonic anhydrase gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05230 YPZ3_RS05235 YPZ3_0891 YPZ3_RS05235 1157243 1157659 + hypothetical protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05235 YPZ3_RS05240 YPZ3_0892 YPZ3_RS05240 1157829 1158230 + general secretion pathway protein GspC gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05240 YPZ3_RS05245 YPZ3_0893 YPZ3_RS05245 1158311 1160233 + type II secretion system protein GspD gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05245 YPZ3_RS05250 YPZ3_0894 YPZ3_RS05250 1160230 1161741 + type II secretion system protein GspE gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05250 YPZ3_RS05255 YPZ3_RS05255 YPZ3_RS05255 1161728 1161922 + general secretion pathway protein GspF gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05255 YPZ3_RS05260 YPZ3_0895 YPZ3_RS05260 1161883 1162929 + type II secretion system protein F gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05260 YPZ3_RS05265 YPZ3_0896 YPZ3_RS05265 1162949 1163386 + type II secretion system protein GspG gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05265 YPZ3_RS05270 YPZ3_RS05270 YPZ3_RS05270 1163391 1163933 + general secretion pathway protein GspH gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05270 YPZ3_RS05275 YPZ3_RS05275 YPZ3_RS05275 1164025 1164315 + general secretion pathway protein GspI gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05275 YPZ3_RS05280 YPZ3_RS05280 YPZ3_RS05280 1164308 1164904 + type II secretion system protein GspJ gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05280 YPZ3_RS05285 YPZ3_0898 YPZ3_RS05285 1164973 1165869 + general secretion pathway protein GspK gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05285 YPZ3_RS05290 YPZ3_0899 YPZ3_RS05290 1165853 1167043 + type II secretion system protein GspL gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05290 YPZ3_RS05295 YPZ3_RS05295 YPZ3_RS05295 1167052 1167501 + membrane protein gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05295 YPZ3_RS05300 YPZ3_0900 YPZ3_RS05300 1167530 1168369 + prepilin peptidase gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05300 YPZ3_RS05305 YPZ3_0901 YPZ3_RS05305 1168421 1168726 - lipoprotein gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05305 YPZ3_RS05310 YPZ3_0902 YPZ3_RS05310 1169010 1169726 + regulatory membrane protein gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05310 YPZ3_RS05315 YPZ3_RS05315 YPZ3_RS05315 1169723 1170124 + hypothetical protein gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05315 YPZ3_RS05320 YPZ3_0903 YPZ3_RS05320 1170279 1171970 + chemotaxis protein gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05320 YPZ3_RS05325 YPZ3_0904 YPZ3_RS05325 1171956 1172591 - protein-disulfide isomerase gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05325 YPZ3_RS05330 YPZ3_0905 YPZ3_RS05330 1172704 1173591 - MBL fold metallo-hydrolase gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05330 YPZ3_RS05335 YPZ3_0906 YPZ3_RS05335 1173698 1174606 + LysR family transcriptional regulator gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05335 YPZ3_RS05340 YPZ3_0907 YPZ3_RS05340 1174975 1176135 + MFS transporter gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05340 YPZ3_RS05345 YPZ3_0908 YPZ3_RS05345 1176132 1177073 - transcriptional regulator activates the transcription of the lysA gene encoding diaminopimelate decarboxylase gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05345 YPZ3_RS05350 YPZ3_0909 YPZ3_RS05350 1177288 1178550 + diaminopimelate decarboxylase catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05350 YPZ3_RS05355 YPZ3_0910 YPZ3_RS05355 1178547 1179569 - transcriptional regulator controls transcription of galETKM gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05355 YPZ3_RS05360 YPZ3_0911 YPZ3_RS05360 1179879 1182140 + biotin transporter BioY gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05360 YPZ3_RS05365 YPZ3_0912 YPZ3_RS05365 1182589 1184745 + bifunctional protein Aas Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1 gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05365 YPZ3_RS05370 YPZ3_0913 YPZ3_RS05370 1184742 1185962 + lysophospholipid transporter LplT gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05370 YPZ3_RS05375 YPZ3_RS05375 YPZ3_RS05375 1185991 1186224 - hypothetical protein gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05375 YPZ3_RS05380 YPZ3_RS05380 YPZ3_RS05380 1186303 1186554 + hypothetical protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05380 YPZ3_RS05385 YPZ3_0914 tas tas 1186931 1187971 - aldo-keto reductase complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05385 YPZ3_RS05390 YPZ3_0915 YPZ3_RS05390 1188360 1189046 - DNA mismatch repair protein MutH gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05390 YPZ3_RS05395 YPZ3_RS05395 YPZ3_RS05395 1189279 1189470 + hypothetical protein gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05395 YPZ3_RS05400 YPZ3_RS05400 YPZ3_RS05400 1189467 1189718 + hypothetical protein gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05400 YPZ3_RS05405 YPZ3_0916 YPZ3_RS05405 1189744 1190271 + RNA pyrophosphohydrolase hydrolyzes diadenosine polyphosphate gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05405 YPZ3_RS05410 YPZ3_0917 YPZ3_RS05410 1190284 1192530 + phosphoenolpyruvate-protein phosphotransferase member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05410 YPZ3_RS05415 YPZ3_0918 YPZ3_RS05415 1192781 1193653 + prolipoprotein diacylglyceryl transferase gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05415 YPZ3_RS05420 YPZ3_0919 YPZ3_RS05420 1193660 1194454 + thymidylate synthase gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05420 YPZ3_RS05425 YPZ3_RS05425 YPZ3_RS05425 1194485 1194703 + membrane protein gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05425 YPZ3_RS05430 YPZ3_RS05430 YPZ3_RS05430 1194690 1195091 + prepilin cleavage protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05430 YPZ3_RS05435 YPZ3_0920 YPZ3_RS05435 1195173 1195727 + transposase gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05435 YPZ3_RS05440 YPZ3_0921 YPZ3_RS05440 1195717 1196196 + transposase gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05440 YPZ3_RS05445 YPZ3_0922 YPZ3_RS05445 1196196 1196975 + transposase gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05445 YPZ3_RS05450 YPZ3_0923 YPZ3_RS05450 1197210 1197818 + cleavage protein gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05450 YPZ3_RS05455 YPZ3_0924 YPZ3_RS05455 1197815 1198285 + membrane protein gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05455 YPZ3_RS05460 YPZ3_0925 YPZ3_RS05460 1198318 1198683 + peptidase gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05460 YPZ3_RS05465 YPZ3_0926 recC recC 1198818 1202189 + exonuclease V subunit gamma catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05465 YPZ3_RS05470 YPZ3_0927 YPZ3_RS05470 1202271 1205159 + protease III degrades small peptides gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05470 YPZ3_RS05475 YPZ3_0928 recB recB 1205156 1208818 + exonuclease V subunit beta helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05475 YPZ3_RS05480 YPZ3_0929 recD recD 1208815 1210773 + exonuclease V subunit alpha helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05480 YPZ3_RS05485 YPZ3_0930 YPZ3_RS05485 1210928 1212253 - amino-acid acetyltransferase catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05485 YPZ3_RS05490 YPZ3_0931 amiC amiC 1212489 1213739 + N-acetylmuramoyl-L-alanine amidase hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05490 YPZ3_RS05495 YPZ3_t8 YPZ3_RS05495 1213969 1214045 - tRNA-Met tRNA gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05495 YPZ3_RS05500 YPZ3_t9 YPZ3_RS05500 1214169 1214245 - tRNA-Met tRNA gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05500 YPZ3_RS05505 YPZ3_0932 mltA mltA 1214461 1215633 + murein transglycosylase membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05505 YPZ3_RS05510 YPZ3_0933 YPZ3_RS05510 1215776 1216603 + sulfur acceptor protein CsdL accepts sulfur from CsdA gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05510 YPZ3_RS05515 YPZ3_0934 YPZ3_RS05515 1216639 1217082 - Fe-S metabolism protein SufE gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05515 YPZ3_RS05520 YPZ3_0935 YPZ3_RS05520 1217217 1218422 - cysteine sulfinate desulfinase gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05520 YPZ3_RS05525 YPZ3_0936 YPZ3_RS05525 1219082 1219999 + transcriptional regulator Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05525 YPZ3_RS05530 YPZ3_0937 YPZ3_RS05530 1220180 1220560 + membrane protein gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05530 YPZ3_RS05535 YPZ3_0938 YPZ3_RS05535 1220553 1221659 + ribosomal RNA large subunit methyltransferase M gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05535 YPZ3_RS05540 YPZ3_0939 YPZ3_RS05540 1221910 1222665 - flap endonuclease Xni similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05540 YPZ3_RS05545 YPZ3_0940 YPZ3_RS05545 1222925 1224289 - LOG family protein gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05545 YPZ3_RS05550 YPZ3_0941 queF queF 1224442 1225287 - NADPH-dependent 7-cyano-7-deazaguanine reductase catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05550 YPZ3_RS05555 YPZ3_0942 YPZ3_RS05555 1225419 1225970 + protein Syd gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05555 YPZ3_RS05560 YPZ3_0943 YPZ3_RS05560 1226660 1227118 + transposase gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05560 YPZ3_RS05565 YPZ3_0944 YPZ3_RS05565 1227372 1227704 + hypothetical protein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05565 YPZ3_RS05570 YPZ3_0945 YPZ3_RS05570 1227704 1228477 + tRNA pseudouridine synthase C catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05570 YPZ3_RS05575 YPZ3_0946 YPZ3_RS05575 1228505 1228954 + flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05575 YPZ3_RS05580 YPZ3_0947 YPZ3_RS05580 1229044 1229433 - hypothetical protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05580 YPZ3_RS05585 YPZ3_0948 dapD dapD 1229557 1230381 - 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05585 YPZ3_RS05590 YPZ3_0949 YPZ3_RS05590 1230556 1233237 - uridylyltransferase catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05590 YPZ3_RS05595 YPZ3_0950 YPZ3_RS05595 1233297 1234088 - methionine aminopeptidase catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05595 YPZ3_RS05600 YPZ3_0951 YPZ3_RS05600 1234523 1235248 + 30S ribosomal protein S2 gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05600 YPZ3_RS05605 YPZ3_0952 tsf tsf 1235376 1236233 + elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05605 YPZ3_RS05610 YPZ3_0953 YPZ3_RS05610 1236442 1237167 + uridylate kinase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05610 YPZ3_RS05615 YPZ3_0954 frr frr 1237303 1237860 + ribosome-recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05615 YPZ3_RS05620 YPZ3_0955 YPZ3_RS05620 1238074 1239270 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05620 YPZ3_RS05625 YPZ3_0956 YPZ3_RS05625 1239494 1240252 + ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific) catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05625 YPZ3_RS05630 YPZ3_0957 cdsA cdsA 1240262 1241110 + CDP-diglyceride synthase catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05630 YPZ3_RS05635 YPZ3_0958 YPZ3_RS05635 1241139 1242494 + protease RseP catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05635 YPZ3_RS05640 YPZ3_0959 YPZ3_RS05640 1242531 1244918 + outer membrane protein assembly factor BamA part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05640 YPZ3_RS05645 YPZ3_0960 YPZ3_RS05645 1245076 1245573 + chaperone protein Skp gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05645 YPZ3_RS05650 YPZ3_0961 lpxD lpxD 1245577 1246599 + UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05650 YPZ3_RS05655 YPZ3_0962 YPZ3_RS05655 1246757 1247302 + 3-hydroxyacyl-ACP dehydratase gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05655 YPZ3_RS05660 YPZ3_0963 YPZ3_RS05660 1247306 1248094 + acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05660 YPZ3_RS05665 YPZ3_0964 lpxB lpxB 1248098 1249282 + lipid-A-disaccharide synthase catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05665 YPZ3_RS05670 YPZ3_0965 rnhB rnhB 1249279 1249875 + ribonuclease HII RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05670 YPZ3_RS05675 YPZ3_0966 dnaE dnaE 1250038 1253520 + DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05675 YPZ3_RS05680 YPZ3_0967 YPZ3_RS05680 1253533 1254492 + acetyl-CoA carboxylase carboxyltransferase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05680 YPZ3_RS05685 YPZ3_0968 YPZ3_RS05685 1254676 1255074 + lyase gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05685 YPZ3_RS05690 YPZ3_0969 tilS tilS 1255076 1256458 + tRNA(Ile)-lysidine synthase Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05690 YPZ3_RS05695 YPZ3_0970 YPZ3_RS05695 1256695 1257012 + cytochrome C554 gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05695 YPZ3_RS05700 YPZ3_RS05700 YPZ3_RS05700 1257277 1257537 - Rho-binding antiterminator Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05700 YPZ3_RS05705 YPZ3_RS05705 YPZ3_RS05705 1257524 1257724 - hypothetical protein gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05705 YPZ3_RS05710 YPZ3_0971 YPZ3_RS05710 1257966 1258514 + hypothetical protein gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05710 YPZ3_RS05715 YPZ3_0972 YPZ3_RS05715 1258517 1258933 + hypothetical protein gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05715 YPZ3_RS05720 YPZ3_0973 YPZ3_RS05720 1259018 1259701 + lipoprotein involved with copper homeostasis and adhesion gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05720 YPZ3_RS05725 YPZ3_0974 YPZ3_RS05725 1259835 1261553 - proline--tRNA ligase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05725 YPZ3_RS05730 YPZ3_0975 YPZ3_RS05730 1261657 1262364 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05730 YPZ3_RS05735 YPZ3_0976 rcsF rcsF 1262361 1262768 - hypothetical protein gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05735 YPZ3_RS05740 YPZ3_0977 metQ metQ 1262886 1263701 - D-methionine-binding lipoprotein MetQ gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05740 YPZ3_RS05745 YPZ3_0978 YPZ3_RS05745 1263765 1264418 - methionine ABC transporter part of the MetNIQ methionine uptake system gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05745 YPZ3_RS05750 YPZ3_0979 metN metN 1264411 1265442 - methionine ABC transporter ATP-binding protein part of the metNIQ transport system for methionine gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05750 YPZ3_RS05755 YPZ3_0980 YPZ3_RS05755 1265629 1266195 + D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05755 YPZ3_RS05765 YPZ3_r4 YPZ3_RS05765 1266634 1268182 + 16S ribosomal RNA rRNA gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05765 YPZ3_RS05770 YPZ3_t10 YPZ3_RS05770 1268316 1268391 + tRNA-Glu tRNA gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05770 YPZ3_RS05775 YPZ3_r5 YPZ3_RS05775 1268635 1271568 + 23S ribosomal RNA rRNA gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05775 YPZ3_RS05780 YPZ3_r6 YPZ3_RS05780 1271660 1271775 + 5S ribosomal RNA rRNA gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05780 YPZ3_RS05785 YPZ3_t11 YPZ3_RS05785 1271901 1271977 + tRNA-Asp tRNA gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05785 YPZ3_RS05790 YPZ3_0981 dkgB dkgB 1272336 1273139 + 2%2C5-diketo-D-gluconic acid reductase B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05790 YPZ3_RS05795 YPZ3_0982 YPZ3_RS05795 1273192 1273638 + hypothetical protein gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05795 YPZ3_RS05800 YPZ3_0983 YPZ3_RS05800 1274020 1274781 + hypothetical protein gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05800 YPZ3_RS05805 YPZ3_0984 mltD mltD 1274823 1276211 - murein transglycosylase catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05805 YPZ3_RS05810 YPZ3_0985 YPZ3_RS05810 1276283 1277038 - hydroxyacylglutathione hydrolase gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05810 YPZ3_RS05815 YPZ3_0986 YPZ3_RS05815 1277083 1277803 + hypothetical protein gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05815 YPZ3_RS05820 YPZ3_0987 YPZ3_RS05820 1277858 1278322 - ribonuclease HI gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05820 YPZ3_RS05825 YPZ3_0988 YPZ3_RS05825 1278392 1279156 + DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05825 YPZ3_RS05830 YPZ3_t12 YPZ3_RS05830 1279269 1279345 + tRNA-Asp tRNA gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05830 YPZ3_RS05835 YPZ3_0989 YPZ3_RS05835 1279402 1280886 - permease gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05835 YPZ3_RS05840 YPZ3_RS05840 YPZ3_RS05840 1281146 1281268 + hypothetical protein gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05840 YPZ3_RS05845 YPZ3_RS05845 YPZ3_RS05845 1281261 1281494 + polysaccharide deacetylase gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05845 YPZ3_RS05850 YPZ3_0990 YPZ3_RS05850 1281545 1282324 - transposase gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05850 YPZ3_RS05855 YPZ3_0991 YPZ3_RS05855 1282324 1283346 - transposase gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05855 YPZ3_RS05860 YPZ3_RS05860 YPZ3_RS05860 1283360 1283536 - integrase gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05860 YPZ3_RS05865 YPZ3_RS05865 YPZ3_RS05865 1283951 1284268 + addiction module protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05865 YPZ3_RS05870 YPZ3_0992 YPZ3_RS05870 1284274 1284588 + DNA-binding protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05870 YPZ3_RS05875 YPZ3_0993 YPZ3_RS05875 1284937 1286025 - transcriptional regulator gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05875 YPZ3_RS05880 YPZ3_RS05880 YPZ3_RS05880 1286022 1286981 - DNA primase gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05880 YPZ3_RS05885 YPZ3_RS05885 YPZ3_RS05885 1286974 1287516 - hypothetical protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05885 YPZ3_RS05890 YPZ3_RS05890 YPZ3_RS05890 1287516 1287716 - dipicolinate synthase gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05890 YPZ3_RS05895 YPZ3_0995 YPZ3_RS05895 1287709 1288596 - DNA-binding protein gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05895 YPZ3_RS05900 YPZ3_RS05900 YPZ3_RS05900 1288618 1288941 - hypothetical protein gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05900 YPZ3_RS05905 YPZ3_RS05905 YPZ3_RS05905 1289000 1289173 - hypothetical protein gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05905 YPZ3_RS05910 YPZ3_RS05910 YPZ3_RS05910 1289404 1289631 + hypothetical protein gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05910 YPZ3_RS05915 YPZ3_0996 YPZ3_RS05915 1289793 1291463 - hypothetical protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05915 YPZ3_RS05920 YPZ3_0997 YPZ3_RS05920 1291514 1292602 - hypothetical protein gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05920 YPZ3_RS05925 YPZ3_0998 YPZ3_RS05925 1292681 1293880 - integrase gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05925 YPZ3_RS05930 YPZ3_0999 YPZ3_RS05930 1294104 1294562 - transposase gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05930 YPZ3_RS05935 YPZ3_RS05935 YPZ3_RS05935 1294552 1294752 - invasin gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05935 YPZ3_RS05940 YPZ3_1000 smpB smpB 1295197 1295679 - SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05940 YPZ3_RS05945 YPZ3_1001 YPZ3_RS05945 1295840 1296274 + hypothetical protein gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05945 YPZ3_RS05950 YPZ3_RS05950 YPZ3_RS05950 1296267 1296551 + protein RnfH gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05950 YPZ3_RS05955 YPZ3_1002 YPZ3_RS05955 1296701 1297042 - outer membrane biogenesis protein BamE gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05955 YPZ3_RS05960 YPZ3_1003 YPZ3_RS05960 1297156 1298817 - DNA repair protein RecN gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05960 YPZ3_RS05965 YPZ3_1004 ppnK ppnK 1298904 1299785 - NAD kinase catalyzes the phosphorylation of NAD to NADP gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05965 YPZ3_RS05970 YPZ3_1005 YPZ3_RS05970 1299909 1300487 + protein GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05970 YPZ3_RS05975 YPZ3_1006 gltA gltA 1300595 1301875 - type II citrate synthase type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05975 YPZ3_RS05980 YPZ3_RS05980 YPZ3_RS05980 1302585 1302974 + succinate dehydrogenase cytochrome b556 large membrane subunit gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05980 YPZ3_RS05985 YPZ3_1007 sdhD sdhD 1302968 1303315 + succinate dehydrogenase cytochrome b556 small membrane subunit gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05985 YPZ3_RS05990 YPZ3_1008 sdhA sdhA 1303316 1305082 + succinate dehydrogenase flavoprotein subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05990 YPZ3_RS05995 YPZ3_1009 sdhB sdhB 1305132 1305848 + succinate dehydrogenase iron-sulfur subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS05995 YPZ3_RS06000 YPZ3_1010 YPZ3_RS06000 1306204 1309011 + 2-oxoglutarate dehydrogenase E1 gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06000 YPZ3_RS06005 YPZ3_1011 YPZ3_RS06005 1309041 1310264 + dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06005 YPZ3_RS06010 YPZ3_1012 sucC sucC 1310377 1311543 + succinyl-CoA ligase subunit beta catalyzes the interconversion of succinyl-CoA and succinate gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06010 YPZ3_RS06015 YPZ3_1013 YPZ3_RS06015 1311543 1312415 + succinyl-CoA synthetase subunit alpha Catalyzes the only substrate-level phosphorylation in the TCA cycle gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06015 YPZ3_RS06020 YPZ3_1014 YPZ3_RS06020 1313182 1314750 + cytochrome D ubiquinol oxidase subunit I part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06020 YPZ3_RS06025 YPZ3_1015 YPZ3_RS06025 1314765 1315904 + cytochrome D ubiquinol oxidase subunit II gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06025 YPZ3_RS06030 YPZ3_RS06030 YPZ3_RS06030 1315917 1316051 + cyd operon protein YbgT gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06030 YPZ3_RS06035 YPZ3_RS06035 YPZ3_RS06035 1316041 1316328 + hypothetical protein gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06035 YPZ3_RS06040 YPZ3_RS06040 YPZ3_RS06040 1316460 1316861 + acyl-CoA thioester hydrolase catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06040 YPZ3_RS06045 YPZ3_1016 YPZ3_RS06045 1316861 1317547 + colicin transporter membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06045 YPZ3_RS06050 YPZ3_1017 YPZ3_RS06050 1317560 1317988 + colicin transporter membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06050 YPZ3_RS06055 YPZ3_1018 YPZ3_RS06055 1318100 1319266 + cell envelope integrity/translocation protein TolA gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06055 YPZ3_RS06060 YPZ3_1019 tolB tolB 1319386 1320678 + protein TolB forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06060 YPZ3_RS06065 YPZ3_1020 YPZ3_RS06065 1320729 1321235 + hypothetical protein gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06065 YPZ3_RS06070 YPZ3_1021 YPZ3_RS06070 1321245 1322054 + tol-pal system protein YbgF periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06070 YPZ3_RS06075 YPZ3_t13 YPZ3_RS06075 1322245 1322320 + tRNA-Lys tRNA gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06075 YPZ3_RS06080 YPZ3_t14 YPZ3_RS06080 1322348 1322423 + tRNA-Lys tRNA gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06080 YPZ3_RS06085 YPZ3_RS06085 YPZ3_RS06085 1322571 1322813 - hypothetical protein gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06085 YPZ3_RS06090 YPZ3_1022 YPZ3_RS06090 1322890 1323951 + quinolinate synthase A 3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06090 YPZ3_RS06095 YPZ3_1023 YPZ3_RS06095 1324073 1324798 + nicotinamide riboside transporter PnuC involved in nicotinamide riboside transport gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06095 YPZ3_RS06100 YPZ3_1024 YPZ3_RS06100 1324913 1325851 - zinc transporter ZitB involved in zinc efflux across the cytoplasmic membrane gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06100 YPZ3_RS06105 YPZ3_1025 YPZ3_RS06105 1326300 1327316 + phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06105 YPZ3_RS06110 YPZ3_1026 YPZ3_RS06110 1327326 1328105 - transposase gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06110 YPZ3_RS06115 YPZ3_1027 YPZ3_RS06115 1328105 1329127 - transposase gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06115 YPZ3_RS06120 YPZ3_RS06120 YPZ3_RS06120 1329186 1329311 + 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06120 YPZ3_RS06125 YPZ3_1028 gpmA gpmA 1329493 1330245 - 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06125 YPZ3_RS06130 YPZ3_1029 YPZ3_RS06130 1330592 1330927 - phosphate-starvation-inducible protein PsiF gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06130 YPZ3_RS06135 YPZ3_1030 galM galM 1331220 1332116 - galactose-1-epimerase mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06135 YPZ3_RS06140 YPZ3_RS06140 YPZ3_RS06140 1332137 1332289 - aldose 1-epimerase gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06140 YPZ3_RS06145 YPZ3_1031 YPZ3_RS06145 1332283 1333434 - galactokinase catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06145 YPZ3_RS06150 YPZ3_1032 YPZ3_RS06150 1333431 1334483 - galactose-1-phosphate uridylyltransferase catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06150 YPZ3_RS06155 YPZ3_1033 YPZ3_RS06155 1334493 1335509 - UDP-glucose 4-epimerase gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06155 YPZ3_RS06160 YPZ3_1034 YPZ3_RS06160 1335869 1336687 - CAAX amino protease gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06160 YPZ3_RS06165 YPZ3_RS06165 YPZ3_RS06165 1336742 1336870 - hypothetical protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06165 YPZ3_RS06170 YPZ3_1035 YPZ3_RS06170 1336904 1338394 - molybdenum ABC transporter ATP-binding protein contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06170 YPZ3_RS06175 YPZ3_1036 YPZ3_RS06175 1338504 1339295 - transcriptional regulator ModE represses the modABCD operon and activates the moaABCD and napFDAGHBC operons gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06175 YPZ3_RS06180 YPZ3_RS06180 YPZ3_RS06180 1339612 1339764 + membrane protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06180 YPZ3_RS06185 YPZ3_1037 modA modA 1339999 1340778 + molybdenum ABC transporter substrate-binding protein with ModCB is involved in the high-affinity transport of molybdate gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06185 YPZ3_RS06190 YPZ3_1038 modB modB 1340778 1341473 + molybdate ABC transporter permease part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06190 YPZ3_RS06195 YPZ3_1039 modC modC 1341467 1342546 + molybdenum import ATP-binding protein ModC Part of the ABC transporter complex modABC involved in molybdenum import gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06195 YPZ3_RS06200 YPZ3_1040 YPZ3_RS06200 1342602 1343423 - pyridoxal phosphate phosphatase gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06200 YPZ3_RS06205 YPZ3_1041 YPZ3_RS06205 1343714 1344718 + 6-phosphogluconolactonase catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06205 YPZ3_RS06210 YPZ3_1042 YPZ3_RS06210 1344903 1346183 - adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06210 YPZ3_RS06215 YPZ3_1043 YPZ3_RS06215 1346282 1347319 + biotin synthase catalyzes the formation of biotin from dethiobiotin gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06215 YPZ3_RS06220 YPZ3_1044 YPZ3_RS06220 1347319 1348470 + 8-amino-7-oxononanoate synthase catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06220 YPZ3_RS06225 YPZ3_1045 YPZ3_RS06225 1348454 1349257 + malonyl-[acyl-carrier protein] O-methyltransferase BioC methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06225 YPZ3_RS06230 YPZ3_1046 YPZ3_RS06230 1349250 1349972 + dithiobiotin synthetase gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06230 YPZ3_RS06235 YPZ3_1047 YPZ3_RS06235 1350124 1350834 - amino acid transporter gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06235 YPZ3_RS06240 YPZ3_1048 YPZ3_RS06240 1351924 1353939 + UvrABC system protein B The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06240 YPZ3_RS06245 YPZ3_RS06245 YPZ3_RS06245 1354231 1354476 + transporter gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06245 YPZ3_RS06250 YPZ3_1049 YPZ3_RS06250 1354607 1355530 - hypothetical protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06250 YPZ3_RS06255 YPZ3_RS06255 YPZ3_RS06255 1355664 1355810 - hypothetical protein gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06255 YPZ3_RS06260 YPZ3_1050 moaA moaA 1356062 1357042 + cyclic pyranopterin monophosphate synthase together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06260 YPZ3_RS06265 YPZ3_1051 moaC moaC 1357143 1357622 + cyclic pyranopterin monophosphate synthase accessory protein MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06265 YPZ3_RS06270 YPZ3_RS06270 moaD moaD 1357619 1357864 + molybdopterin synthase small subunit catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06270 YPZ3_RS06275 YPZ3_1052 YPZ3_RS06275 1357867 1358319 + molybdopterin guanine dinucleotide biosynthesis protein MoaE gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06275 YPZ3_RS06280 YPZ3_1053 YPZ3_RS06280 1358463 1359173 + membrane protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06280 YPZ3_RS06285 YPZ3_RS06285 YPZ3_RS06285 1359248 1359418 + transposase gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06285 YPZ3_RS06290 YPZ3_1054 YPZ3_RS06290 1359408 1359866 + transposase gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06290 YPZ3_RS06295 YPZ3_1055 YPZ3_RS06295 1360095 1361798 - oxygen-dependent choline dehydrogenase catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06295 YPZ3_RS06300 YPZ3_1056 YPZ3_RS06300 1361821 1363293 - NAD/NADP-dependent betaine aldehyde dehydrogenase gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06300 YPZ3_RS06305 YPZ3_1057 YPZ3_RS06305 1363351 1363947 - transcriptional regulator gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06305 YPZ3_RS06310 YPZ3_1058 YPZ3_RS06310 1364312 1366360 + choline transporter BetT proton-motive-force-driven choline transporter gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06310 YPZ3_RS06315 YPZ3_1059 YPZ3_RS06315 1366592 1367485 + XRE family transcriptional regulator gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06315 YPZ3_RS06320 YPZ3_1060 YPZ3_RS06320 1367523 1368371 - multidrug DMT transporter gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06320 YPZ3_RS06325 YPZ3_1061 YPZ3_RS06325 1368717 1369580 + purine nucleoside phosphorylase gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06325 YPZ3_RS06330 YPZ3_1062 YPZ3_RS06330 1369719 1370363 + nucleoside permease gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06330 YPZ3_RS06335 YPZ3_1063 YPZ3_RS06335 1370509 1370967 + transposase gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06335 YPZ3_RS06340 YPZ3_1064 YPZ3_RS06340 1371068 1371685 + nucleoside permease gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06340 YPZ3_RS06345 YPZ3_1065 YPZ3_RS06345 1371773 1372246 - zinc resistance protein gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06345 YPZ3_RS06350 YPZ3_1066 YPZ3_RS06350 1372604 1374418 + sensor protein ZraS gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06350 YPZ3_RS06355 YPZ3_1067 YPZ3_RS06355 1374405 1375769 + acetoacetate metabolism regulatory protein AtoC DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06355 YPZ3_RS06360 YPZ3_1068 YPZ3_RS06360 1376117 1377226 + NADH:flavin oxidoreductase gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06360 YPZ3_RS06365 YPZ3_1069 YPZ3_RS06365 1377227 1378138 - LysR family transcriptional regulator gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06365 YPZ3_RS06370 YPZ3_RS06370 YPZ3_RS06370 1378693 1378920 + N5%2CN10-methylene tetrahydromethanopterin reductase gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06370 YPZ3_RS06375 YPZ3_1070 YPZ3_RS06375 1378931 1379257 + hypothetical protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06375 YPZ3_RS06380 YPZ3_1071 YPZ3_RS06380 1379296 1380402 - membrane protein gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06380 YPZ3_RS06385 YPZ3_1072 YPZ3_RS06385 1380415 1381590 - membrane protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06385 YPZ3_RS06390 YPZ3_1073 YPZ3_RS06390 1381595 1383337 - multidrug ABC transporter ATP-binding protein gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06390 YPZ3_RS06395 YPZ3_1074 YPZ3_RS06395 1383351 1384337 - transporter gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06395 YPZ3_RS06400 YPZ3_1075 YPZ3_RS06400 1384389 1385099 - transcriptional regulator gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06400 YPZ3_RS06405 YPZ3_1076 YPZ3_RS06405 1385490 1386845 + RNA helicase this helicase is not essential cell growth gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06405 YPZ3_RS06410 YPZ3_RS06410 YPZ3_RS06410 1386975 1387241 + transposase gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06410 YPZ3_RS06415 YPZ3_RS06415 YPZ3_RS06415 1387297 1387530 + transposase gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06415 YPZ3_RS06425 YPZ3_RS06425 YPZ3_RS06425 1389080 1389394 + hypothetical protein gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06425 YPZ3_RS06430 YPZ3_1078 YPZ3_RS06430 1389569 1390777 + transposase gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06430 YPZ3_RS06435 YPZ3_1079 YPZ3_RS06435 1390869 1391459 + transposase gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06435 YPZ3_RS06440 YPZ3_1080 YPZ3_RS06440 1391377 1392378 + ATP-dependent RNA helicase RhlE this helicase is not essential cell growth gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06440 YPZ3_RS06445 YPZ3_RS06445 YPZ3_RS06445 1392444 1392599 + invasin gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06445 YPZ3_RS06450 YPZ3_1081 YPZ3_RS06450 1392589 1393047 + transposase gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06450 YPZ3_RS06455 YPZ3_1082 YPZ3_RS06455 1393462 1394391 + hypothetical protein gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06455 YPZ3_RS06460 YPZ3_1083 YPZ3_RS06460 1394691 1395629 + tRNA-dihydrouridine synthase C gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06460 YPZ3_RS06465 YPZ3_RS06465 YPZ3_RS06465 1395703 1395882 - membrane protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06465 YPZ3_RS06470 YPZ3_1084 pbpG pbpG 1396221 1397156 + D-alanyl-D-alanine endopeptidase specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7 gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06470 YPZ3_RS06475 YPZ3_1085 YPZ3_RS06475 1397277 1398989 - lactate dehydrogenase component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06475 YPZ3_RS06480 YPZ3_1086 YPZ3_RS06480 1399199 1399738 + adenylate cyclase gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06480 YPZ3_RS06485 YPZ3_1087 YPZ3_RS06485 1399764 1400105 - hypothetical protein gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06485 YPZ3_RS06490 YPZ3_1088 YPZ3_RS06490 1400418 1401521 + hypothetical protein gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06490 YPZ3_RS06495 YPZ3_RS06495 YPZ3_RS06495 1401706 1401954 + membrane protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06495 YPZ3_RS06500 YPZ3_1089 YPZ3_RS06500 1402162 1402998 + phosphonates import ATP-binding protein PhnC gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06500 YPZ3_RS06505 YPZ3_1090 YPZ3_RS06505 1403035 1403964 + phosphonate ABC transporter substrate-binding protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06505 YPZ3_RS06510 YPZ3_1091 YPZ3_RS06510 1404067 1404927 + phosphonate ABC transporter permease gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06510 YPZ3_RS06515 YPZ3_1092 YPZ3_RS06515 1404930 1405811 + phosphonate ABC transporter permease gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06515 YPZ3_RS06520 YPZ3_1093 YPZ3_RS06520 1406057 1406530 + hypothetical protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06520 YPZ3_RS06525 YPZ3_1094 YPZ3_RS06525 1406965 1408233 + branched-chain amino acid ABC transporter substrate-binding protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06525 YPZ3_RS06530 YPZ3_1095 YPZ3_RS06530 1408357 1409958 + urea ABC transporter permease gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06530 YPZ3_RS06535 YPZ3_1096 YPZ3_RS06535 1409958 1411034 + amino acid ABC transporter permease gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06535 YPZ3_RS06540 YPZ3_1097 YPZ3_RS06540 1411031 1411867 + ABC transporter ATP-binding protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06540 YPZ3_RS06545 YPZ3_1098 YPZ3_RS06545 1411961 1412659 + ABC transporter ATP-binding protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06545 YPZ3_RS06550 YPZ3_1099 YPZ3_RS06550 1412774 1413631 + hypothetical protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06550 YPZ3_RS06555 YPZ3_1100 YPZ3_RS06555 1413655 1415070 + amino acid decarboxylase gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06555 YPZ3_RS06560 YPZ3_1101 sseA sseA 1415267 1416121 - 3-mercaptopyruvate sulfurtransferase catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06560 YPZ3_RS06565 YPZ3_1102 YPZ3_RS06565 1416857 1417324 + glycine/betaine ABC transporter substrate-binding protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06565 YPZ3_RS06570 YPZ3_1103 YPZ3_RS06570 1417469 1417789 + glycine/betaine ABC transporter substrate-binding protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06570 YPZ3_RS06575 YPZ3_1104 YPZ3_RS06575 1418050 1419204 + osmoprotectant uptake system permease gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06575 YPZ3_RS06580 YPZ3_1105 YPZ3_RS06580 1419201 1420139 + ABC transporter ATP-binding protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06580 YPZ3_RS06585 YPZ3_1106 YPZ3_RS06585 1420136 1420972 + osmoprotectant uptake system permease gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06585 YPZ3_RS06590 YPZ3_1107 YPZ3_RS06590 1421450 1422784 + arginine/agmatine antiporter gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06590 YPZ3_RS06595 YPZ3_1108 YPZ3_RS06595 1422854 1425160 + arginine decarboxylase biodegradative%3B catalyzes the formation of agmatine from arginine gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06595 YPZ3_RS06600 YPZ3_RS06600 YPZ3_RS06600 1425278 1425481 - hypothetical protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06600 YPZ3_RS06605 YPZ3_1109 YPZ3_RS06605 1425606 1426496 - multidrug transporter gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06605 YPZ3_RS06610 YPZ3_1110 YPZ3_RS06610 1426908 1428023 - phosphoporin protein E gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06610 YPZ3_RS06615 YPZ3_1111 dinG dinG 1428293 1430473 + ATP-dependent DNA helicase DinG helicase involved in DNA repair and perhaps also replication gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06615 YPZ3_RS06620 YPZ3_1112 YPZ3_RS06620 1430541 1431983 - catalase gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06620 YPZ3_RS06625 YPZ3_1113 YPZ3_RS06625 1432341 1432883 + membrane protein gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06625 YPZ3_RS06630 YPZ3_1114 YPZ3_RS06630 1433140 1434348 - tyrosine transporter TyrP tyrosine specific permease gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06630 YPZ3_RS06635 YPZ3_1115 YPZ3_RS06635 1434967 1436160 + hypothetical protein gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06635 YPZ3_RS06640 YPZ3_1116 YPZ3_RS06640 1436218 1436727 - ecotin serine protease inhibitor%2C inhibits trypsin and other proteases gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06640 YPZ3_RS06645 YPZ3_RS06645 YPZ3_RS06645 1436762 1437019 - (2Fe-2S) ferredoxin gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06645 YPZ3_RS06650 YPZ3_1117 YPZ3_RS06650 1437023 1438153 - ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06650 YPZ3_RS06655 YPZ3_1118 YPZ3_RS06655 1438316 1440604 - ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06655 YPZ3_RS06660 YPZ3_1119 YPZ3_RS06660 1441098 1441826 - ubiquinone biosynthesis O-methyltransferase Involved in ubiquinone biosynthesis gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06660 YPZ3_RS06665 YPZ3_1120 YPZ3_RS06665 1442088 1444763 + DNA gyrase subunit A gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06665 YPZ3_RS06670 YPZ3_RS06670 YPZ3_RS06670 1444766 1444891 + hypothetical protein gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06670 YPZ3_RS06675 YPZ3_1121 YPZ3_RS06675 1445044 1447824 + sensor histidine kinase gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06675 YPZ3_RS06680 YPZ3_1122 YPZ3_RS06680 1447892 1448545 - transcriptional regulator two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06680 YPZ3_RS06685 YPZ3_1123 YPZ3_RS06685 1448548 1449120 - histidine phosphotransferase gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06685 YPZ3_RS06690 YPZ3_1124 YPZ3_RS06690 1449288 1451165 - ATPase gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06690 YPZ3_RS06695 YPZ3_1125 YPZ3_RS06695 1451264 1452418 - MFS transporter gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06695 YPZ3_RS06705 YPZ3_1126 YPZ3_RS06705 1453521 1454636 + porin gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06705 YPZ3_RS06710 YPZ3_1127 YPZ3_RS06710 1454838 1455296 + transposase gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06710 YPZ3_RS06715 YPZ3_t15 YPZ3_RS06715 1455730 1455817 + tRNA-Ser tRNA gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06715 YPZ3_RS06720 YPZ3_t16 YPZ3_RS06720 1455823 1455898 + tRNA-Thr tRNA gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06720 YPZ3_RS06725 YPZ3_1128 YPZ3_RS06725 1456086 1457252 - beta-lactam-binding protein AmpH this protein has no known enzymatic function gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06725 YPZ3_RS06730 YPZ3_RS06730 YPZ3_RS06730 1457370 1457540 + hypothetical protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06730 YPZ3_RS06735 YPZ3_1129 YPZ3_RS06735 1457527 1459053 - MFS transporter gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06735 YPZ3_RS06740 YPZ3_1130 YPZ3_RS06740 1459469 1460458 + MBL fold metallo-hydrolase gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06740 YPZ3_RS06745 YPZ3_1131 YPZ3_RS06745 1460532 1462319 - methyl-accepting chemotaxis protein gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06745 YPZ3_RS06750 YPZ3_1132 YPZ3_RS06750 1462741 1463676 - outer membrane protease gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06750 YPZ3_RS06755 YPZ3_RS06755 YPZ3_RS06755 1463848 1464090 - virulence protein MsgA gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06755 YPZ3_RS06760 YPZ3_1133 YPZ3_RS06760 1464296 1465018 - peptidase S24 gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06760 YPZ3_RS06765 YPZ3_1134 YPZ3_RS06765 1465292 1465771 + antitermination protein Q gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06765 YPZ3_RS06770 YPZ3_1135 YPZ3_RS06770 1465982 1467286 + tRNA synthetase gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06770 YPZ3_RS06775 YPZ3_1136 YPZ3_RS06775 1467343 1467992 + aldolase gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06775 YPZ3_RS06780 YPZ3_1137 YPZ3_RS06780 1467998 1468807 + alkaline phosphatase gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06780 YPZ3_RS06785 YPZ3_1138 YPZ3_RS06785 1468783 1469577 + hydroxypyruvate isomerase gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06785 YPZ3_RS06790 YPZ3_RS06790 YPZ3_RS06790 1470208 1470498 + hypothetical protein gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06790 YPZ3_RS06795 YPZ3_1139 YPZ3_RS06795 1470592 1471161 + ATP-binding protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06795 YPZ3_RS06800 YPZ3_RS06800 YPZ3_RS06800 1471166 1471360 + hypothetical protein gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06800 YPZ3_RS06805 YPZ3_1140 YPZ3_RS06805 1471357 1472865 + tail protein gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06805 YPZ3_RS06810 YPZ3_1141 YPZ3_RS06810 1472887 1473255 + phage tail protein gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06810 YPZ3_RS06815 YPZ3_RS06815 YPZ3_RS06815 1473257 1473556 + hypothetical protein gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06815 YPZ3_RS06820 YPZ3_1142 YPZ3_RS06820 1473677 1475170 + coat protein gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06820 YPZ3_RS06825 YPZ3_1143 YPZ3_RS06825 1475437 1476843 + hypothetical protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06825 YPZ3_RS06830 YPZ3_1144 YPZ3_RS06830 1476840 1477895 + tail protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06830 YPZ3_RS06835 YPZ3_1145 YPZ3_RS06835 1477911 1478507 + baseplate assembly protein gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06835 YPZ3_RS06840 YPZ3_1146 YPZ3_RS06840 1478504 1478959 + hypothetical protein gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06840 YPZ3_RS06845 YPZ3_1147 YPZ3_RS06845 1478963 1480099 + hypothetical protein gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06845 YPZ3_RS06850 YPZ3_RS06850 YPZ3_RS06850 1480096 1480356 + hypothetical protein gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06850 YPZ3_RS06855 YPZ3_1148 YPZ3_RS06855 1480353 1480700 + hypothetical protein gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06855 YPZ3_RS06860 YPZ3_1149 YPZ3_RS06860 1480797 1481576 + tail protein gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06860 YPZ3_RS06865 YPZ3_1150 YPZ3_RS06865 1481874 1482614 + transcriptional regulator gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06865 YPZ3_RS06870 YPZ3_1151 YPZ3_RS06870 1482905 1484341 + 6-phospho-beta-glucosidase gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06870 YPZ3_RS06875 YPZ3_1152 YPZ3_RS06875 1484467 1484829 - hypothetical protein gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06875 YPZ3_RS06885 YPZ3_1153 YPZ3_RS06885 1485529 1486017 - hypothetical protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06885 YPZ3_RS06890 YPZ3_1154 YPZ3_RS06890 1486030 1487178 - HNH endonuclease gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06890 YPZ3_RS06900 YPZ3_t17 YPZ3_RS06900 1487968 1488044 - tRNA-Pro tRNA gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06900 YPZ3_RS06905 YPZ3_1156 YPZ3_RS06905 1488149 1489945 - membrane protein gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06905 YPZ3_RS06910 YPZ3_RS06910 YPZ3_RS06910 1489973 1490200 - hypothetical protein gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06910 YPZ3_RS06915 YPZ3_1157 YPZ3_RS06915 1490378 1491382 + nucleoid-associated protein gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06915 YPZ3_RS06920 YPZ3_RS06920 YPZ3_RS06920 1491438 1491593 + invasin gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06920 YPZ3_RS06925 YPZ3_1158 YPZ3_RS06925 1491583 1492041 + transposase gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06925 YPZ3_RS06930 YPZ3_RS06930 YPZ3_RS06930 1492180 1492464 - 50S ribosomal protein L25 the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06930 YPZ3_RS06935 YPZ3_1159 YPZ3_RS06935 1492626 1494383 - hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06935 YPZ3_RS06940 YPZ3_1160 YPZ3_RS06940 1494897 1495604 + ribosomal small subunit pseudouridine synthase A catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06940 YPZ3_RS06945 YPZ3_1161 YPZ3_RS06945 1495723 1496922 + Bcr/CflA family drug resistance efflux transporter Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06945 YPZ3_RS06950 YPZ3_1162 YPZ3_RS06950 1497889 1498233 + hypothetical protein gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06950 YPZ3_RS06955 YPZ3_1163 YPZ3_RS06955 1498294 1499886 - ABC transporter ATP-binding protein with YejAEF is involved in resistance to microcin C gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06955 YPZ3_RS06960 YPZ3_1164 YPZ3_RS06960 1499888 1500913 - microcin C ABC transporter permease part of the microcin C transport system gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06960 YPZ3_RS06965 YPZ3_1165 YPZ3_RS06965 1500916 1502016 - microcin C ABC transporter permease YejB with YejAEF is involved in resistance to microcin C gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06965 YPZ3_RS06970 YPZ3_1166 YPZ3_RS06970 1502026 1503834 - peptide ABC transporter substrate-binding protein with YejBEF is involved in resistance to microcin C gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06970 YPZ3_RS06975 YPZ3_1167 YPZ3_RS06975 1503916 1505388 - phage resistance protein involved in resistance to the phages N4 and lambda gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06975 YPZ3_RS06980 YPZ3_1168 spr spr 1506084 1506668 - hypothetical protein mutational suppressor of prc thermosensitivity gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06980 YPZ3_RS06985 YPZ3_1169 YPZ3_RS06985 1507110 1507811 - membrane protein gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06985 YPZ3_RS06990 YPZ3_1170 YPZ3_RS06990 1507870 1508853 - hypothetical protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06990 YPZ3_RS06995 YPZ3_RS06995 YPZ3_RS06995 1509177 1509290 - hypothetical protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS06995 YPZ3_RS07000 YPZ3_1171 YPZ3_RS07000 1509661 1510404 + transcriptional regulator regulates the expression of uxuBA gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07000 YPZ3_RS07005 YPZ3_1172 YPZ3_RS07005 1510548 1512020 - D-mannonate oxidoreductase gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07005 YPZ3_RS07010 YPZ3_1173 YPZ3_RS07010 1512605 1513798 + mannonate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07010 YPZ3_RS07015 YPZ3_1174 YPZ3_RS07015 1513938 1514510 - elongation factor P-like protein Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07015 YPZ3_RS07020 YPZ3_1175 YPZ3_RS07020 1514614 1515858 - tryptophan permease tryptophan transporter of high affinity gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07020 YPZ3_RS07025 YPZ3_RS07025 YPZ3_RS07025 1516233 1516487 + hypothetical protein gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07025 YPZ3_RS07030 YPZ3_1176 YPZ3_RS07030 1516556 1517371 - 3-oxoacyl-ACP reductase gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07030 YPZ3_RS07035 YPZ3_1177 YPZ3_RS07035 1517382 1518332 - dihydrofolate reductase gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07035 YPZ3_RS07040 YPZ3_1178 YPZ3_RS07040 1518344 1519486 - fumarylacetoacetate hydrolase gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07040 YPZ3_RS07045 YPZ3_1179 YPZ3_RS07045 1519838 1521334 + aldehyde dehydrogenase gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07045 YPZ3_RS07050 YPZ3_1180 YPZ3_RS07050 1521338 1522891 + carbohydrate kinase gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07050 YPZ3_RS07055 YPZ3_1181 YPZ3_RS07055 1522911 1523621 + ribose-5-phosphate isomerase A 2 gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07055 YPZ3_RS07060 YPZ3_1182 YPZ3_RS07060 1523745 1524833 + sugar ABC transporter substrate-binding protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07060 YPZ3_RS07065 YPZ3_1183 YPZ3_RS07065 1525002 1526516 + sugar ABC transporter ATP-binding protein gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07065 YPZ3_RS07070 YPZ3_1184 YPZ3_RS07070 1526552 1527550 + sugar ABC transporter permease gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07070 YPZ3_RS07075 YPZ3_1185 YPZ3_RS07075 1527663 1528118 - ADP-ribose pyrophosphatase gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07075 YPZ3_RS07080 YPZ3_1186 YPZ3_RS07080 1528380 1529513 + PTS fructose transporter subunit IIA phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07080 YPZ3_RS07085 YPZ3_1187 fruK fruK 1529510 1530448 + 1-phosphofructokinase converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07085 YPZ3_RS07090 YPZ3_1188 YPZ3_RS07090 1530463 1532163 + PTS fructose transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07090 YPZ3_RS07095 YPZ3_1189 YPZ3_RS07095 1532488 1533132 + protein PsaE gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07095 YPZ3_RS07100 YPZ3_1190 YPZ3_RS07100 1533129 1533617 + protein PsaF gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07100 YPZ3_RS07105 YPZ3_1191 YPZ3_RS07105 1534162 1534638 + pH 6 antigen gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07105 YPZ3_RS07110 YPZ3_1192 YPZ3_RS07110 1534765 1535586 + chaperone protein PsaB gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07110 YPZ3_RS07115 YPZ3_1193 YPZ3_RS07115 1535670 1538141 + usher protein gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07115 YPZ3_RS07120 YPZ3_1194 YPZ3_RS07120 1538228 1539085 - endonuclease Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07120 YPZ3_RS07125 YPZ3_1195 YPZ3_RS07125 1539249 1540337 - membrane protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07125 YPZ3_RS07130 YPZ3_1196 YPZ3_RS07130 1540995 1541867 + transcriptional regulator gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07130 YPZ3_RS07135 YPZ3_1197 YPZ3_RS07135 1542125 1543636 + lysine transporter gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07135 YPZ3_RS07140 YPZ3_1198 YPZ3_RS07140 1543922 1545067 + iron ABC transporter substrate-binding protein gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07140 YPZ3_RS07145 YPZ3_1199 YPZ3_RS07145 1545262 1546344 + iron-siderophore ABC transporter permease gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07145 YPZ3_RS07150 YPZ3_1200 YPZ3_RS07150 1546341 1547129 + iron ABC transporter ATP-binding protein gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07150 YPZ3_RS07155 YPZ3_1201 YPZ3_RS07155 1547389 1549386 + ligand-gated channel protein YiuR%3B outer membrane siderophore receptor gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07155 YPZ3_RS07160 YPZ3_1202 YPZ3_RS07160 1549656 1550276 - glutathione S-transferase gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07160 YPZ3_RS07165 YPZ3_1203 YPZ3_RS07165 1550430 1551080 - hydrolase gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07165 YPZ3_RS07170 YPZ3_1204 YPZ3_RS07170 1551567 1552634 + 2-oxobutyrate oxidase gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07170 YPZ3_RS07175 YPZ3_1205 YPZ3_RS07175 1552862 1553686 + metal ABC transporter substrate-binding protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07175 YPZ3_RS07180 YPZ3_1206 YPZ3_RS07180 1553683 1554669 + ABC transporter ATP-binding protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07180 YPZ3_RS07185 YPZ3_1207 YPZ3_RS07185 1554666 1555337 + metal ABC transporter permease gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07185 YPZ3_RS07190 YPZ3_1208 YPZ3_RS07190 1555672 1556877 + D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07190 YPZ3_RS07195 YPZ3_RS07195 YPZ3_RS07195 1557168 1557320 + hypothetical protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07195 YPZ3_RS07200 YPZ3_1209 YPZ3_RS07200 1557317 1558618 - serine transporter gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07200 YPZ3_RS07205 YPZ3_1210 YPZ3_RS07205 1559718 1560482 - transcriptional regulator gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07205 YPZ3_RS07210 YPZ3_1211 YPZ3_RS07210 1560712 1561383 - deoxyribose-phosphate aldolase gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07210 YPZ3_RS07215 YPZ3_1212 YPZ3_RS07215 1561641 1562246 - UDP-diphosphatase gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07215 YPZ3_RS07220 YPZ3_1213 YPZ3_RS07220 1562246 1562918 - phosphoesterase gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07220 YPZ3_RS07225 YPZ3_1214 YPZ3_RS07225 1563395 1565083 - transporter gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07225 YPZ3_RS07230 YPZ3_RS07230 YPZ3_RS07230 1565493 1565756 - glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07230 YPZ3_RS07235 YPZ3_RS07235 YPZ3_RS07235 1566219 1566533 + membrane protein gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07235 YPZ3_RS07240 YPZ3_RS07240 YPZ3_RS07240 1566549 1566668 + hypothetical protein gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07240 YPZ3_RS07245 YPZ3_1215 YPZ3_RS07245 1566675 1567160 + hypothetical protein gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07245 YPZ3_RS07250 YPZ3_1216 YPZ3_RS07250 1567678 1568787 + putrescine ABC transporter substrate-binding protein gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07250 YPZ3_RS07255 YPZ3_1217 potG potG 1568958 1570091 + putrescine ABC transporter ATP-binding protein part of the PotFGHI ATP-dependent putrescine transporter gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07255 YPZ3_RS07260 YPZ3_1218 YPZ3_RS07260 1570116 1571081 + putrescine/spermidine ABC transporter permease gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07260 YPZ3_RS07265 YPZ3_1219 YPZ3_RS07265 1571078 1571923 + putrescine/spermidine ABC transporter permease gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07265 YPZ3_RS07270 YPZ3_1220 YPZ3_RS07270 1572048 1572512 + membrane protein gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07270 YPZ3_RS07275 YPZ3_1221 rumB rumB 1572596 1573726 + 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07275 YPZ3_RS07280 YPZ3_1222 YPZ3_RS07280 1573853 1574584 - arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07280 YPZ3_RS07285 YPZ3_RS07285 YPZ3_RS07285 1574704 1574820 + hypothetical protein gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07285 YPZ3_RS07290 YPZ3_RS07290 YPZ3_RS07290 1574832 1575062 + hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07290 YPZ3_RS07295 YPZ3_1223 YPZ3_RS07295 1575403 1576329 + SPFH/band 7 family protein gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07295 YPZ3_RS07300 YPZ3_1224 YPZ3_RS07300 1576741 1577832 + ABC transporter substrate-binding protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07300 YPZ3_RS07305 YPZ3_RS07305 YPZ3_RS07305 1577832 1578888 + iron-siderophore ABC transporter permease gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07305 YPZ3_RS07310 YPZ3_1227 YPZ3_RS07310 1578885 1579670 + iron ABC transporter ATP-binding protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07310 YPZ3_RS07315 YPZ3_1228 YPZ3_RS07315 1579658 1580455 + nicotianamine synthase gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07315 YPZ3_RS07320 YPZ3_1229 YPZ3_RS07320 1580448 1581818 + hypothetical protein gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07320 YPZ3_RS07325 YPZ3_1230 YPZ3_RS07325 1581815 1582660 + membrane protein gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07325 YPZ3_RS07335 YPZ3_1231 artM artM 1582850 1583518 - arginine transporter permease subunit ArtM with ArtPQJI acts to transport arginine across the inner membrane gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07335 YPZ3_RS07340 YPZ3_1232 YPZ3_RS07340 1583518 1584234 - arginine transporter permease subunit ArtQ with ArtPMJI transports arginine across the inner membrane gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07340 YPZ3_RS07345 YPZ3_1233 YPZ3_RS07345 1584246 1584977 - arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07345 YPZ3_RS07350 YPZ3_1234 YPZ3_RS07350 1584998 1585726 - arginine ABC transporter ATP-binding protein gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07350 YPZ3_RS07355 YPZ3_1235 YPZ3_RS07355 1586021 1586581 - chorismate mutase catalyzes the interconversion of chorismate to prephenate gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07355 YPZ3_RS07360 YPZ3_1236 YPZ3_RS07360 1586751 1587326 - lipoprotein induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07360 YPZ3_RS07365 YPZ3_1237 YPZ3_RS07365 1587423 1588430 - hypothetical protein gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07365 YPZ3_RS07370 YPZ3_1238 YPZ3_RS07370 1588530 1590020 - hypothetical protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07370 YPZ3_RS07375 YPZ3_1239 YPZ3_RS07375 1590017 1591036 - threonine aldolase low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07375 YPZ3_RS07380 YPZ3_1240 YPZ3_RS07380 1591385 1593106 - pyruvate dehydrogenase catalyzes the formation of acetate from pyruvate gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07380 YPZ3_RS07385 YPZ3_1241 YPZ3_RS07385 1593250 1594272 - oxidoreductase gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07385 YPZ3_RS07390 YPZ3_1242 YPZ3_RS07390 1594386 1596038 - hydroxylamine reductase gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07390 YPZ3_RS07395 YPZ3_1243 YPZ3_RS07395 1596240 1597136 - membrane protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07395 YPZ3_RS07400 YPZ3_1244 YPZ3_RS07400 1597489 1599156 + hypothetical protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07400 YPZ3_RS07405 YPZ3_1245 YPZ3_RS07405 1599293 1600240 - virulence factor gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07405 YPZ3_RS07410 YPZ3_1246 YPZ3_RS07410 1600477 1601589 + macrolide transporter subunit MacA confers macrolide resistance via active drug efflux gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07410 YPZ3_RS07415 YPZ3_1247 YPZ3_RS07415 1601589 1603538 + MacB family efflux pump subunit with MacA is involved in the export of macrolide gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07415 YPZ3_RS07420 YPZ3_RS07420 YPZ3_RS07420 1603819 1604082 - cold-shock protein inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07420 YPZ3_RS07425 YPZ3_1248 clpS clpS 1604443 1604763 + ATP-dependent Clp protease adapter protein ClpS involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07425 YPZ3_RS07430 YPZ3_1249 clpA clpA 1604789 1607065 + ATP-dependent Clp protease ATP-binding subunit ClpA ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07430 YPZ3_RS07435 YPZ3_1250 YPZ3_RS07435 1607358 1607816 + transposase gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07435 YPZ3_RS07440 YPZ3_RS07440 YPZ3_RS07440 1608188 1608406 - translation initiation factor IF-1 gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07440 YPZ3_RS07445 YPZ3_1251 YPZ3_RS07445 1608572 1609282 - leucyl/phenylalanyl-tRNA--protein transferase gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07445 YPZ3_RS07450 YPZ3_1252 YPZ3_RS07450 1609501 1611225 - glutathione ABC transporter ATP-binding protein in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07450 YPZ3_RS07455 YPZ3_1253 YPZ3_RS07455 1611228 1612994 - glutathione ABC transporter ATP-binding protein in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07455 YPZ3_RS07460 YPZ3_RS07460 YPZ3_RS07460 1613211 1613348 + hypothetical protein gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07460 YPZ3_RS07465 YPZ3_1254 YPZ3_RS07465 1613453 1614415 - thioredoxin reductase catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07465 YPZ3_RS07470 YPZ3_1255 YPZ3_RS07470 1615182 1615676 + AsnC family transcriptional regulator mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07470 YPZ3_RS07475 YPZ3_1256 YPZ3_RS07475 1615799 1619716 + cell division protein FtsK gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07475 YPZ3_RS07480 YPZ3_1257 lolA lolA 1619909 1620517 + outer membrane lipoprotein carrier protein LolA participates with LolB in the incorporation of lipoprotein into the outer membrane gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07480 YPZ3_RS07485 YPZ3_1258 YPZ3_RS07485 1620528 1621871 + recombinase RarA gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07485 YPZ3_RS07490 YPZ3_1259 YPZ3_RS07490 1622113 1623405 + serine--tRNA ligase gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07490 YPZ3_RS07495 YPZ3_1260 YPZ3_RS07495 1623660 1624808 + MFS transporter gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07495 YPZ3_RS07500 YPZ3_1261 pflA pflA 1624962 1625696 - pyruvate formate lyase-activating protein activates pyruvate formate-lyase 1 under anaerobic conditions gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07500 YPZ3_RS07505 YPZ3_1262 YPZ3_RS07505 1626683 1627357 + LPS glycosyltransferase gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07505 YPZ3_RS07510 YPZ3_1263 YPZ3_RS07510 1627475 1629757 - keto-acid formate acetyltransferase formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07510 YPZ3_RS07515 YPZ3_1264 YPZ3_RS07515 1629813 1630670 - formate transporter FocA gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07515 YPZ3_RS07520 YPZ3_1265 YPZ3_RS07520 1631367 1633133 - hypothetical protein gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07520 YPZ3_RS07525 YPZ3_1266 ansB ansB 1633282 1634319 + L-asparaginase catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07525 YPZ3_RS07530 YPZ3_1267 YPZ3_RS07530 1634588 1635682 + hemagglutinin gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07530 YPZ3_RS07535 YPZ3_1268 YPZ3_RS07535 1635703 1637550 + hypothetical protein gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07535 YPZ3_RS07540 YPZ3_1269 YPZ3_RS07540 1637917 1639002 + phosphoserine aminotransferase catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07540 YPZ3_RS07545 YPZ3_1270 YPZ3_RS07545 1639165 1640451 + 3-phosphoshikimate 1-carboxyvinyltransferase gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07545 YPZ3_RS07550 YPZ3_1271 YPZ3_RS07550 1640764 1641456 + cytidylate kinase gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07550 YPZ3_RS07555 YPZ3_1272 rpsA rpsA 1641630 1643303 + 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07555 YPZ3_RS07560 YPZ3_RS07560 ihfB ihfB 1643364 1643648 + integration host factor subunit beta This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07560 YPZ3_RS07565 YPZ3_RS07565 YPZ3_RS07565 1643632 1643934 - hypothetical protein gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07565 YPZ3_RS07570 YPZ3_1273 YPZ3_RS07570 1644195 1646486 + competence protein ComEC gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07570 YPZ3_RS07575 YPZ3_1274 YPZ3_RS07575 1646522 1648270 + lipid A export ATP-binding/permease MsbA involved in the transport of lipid A across the inner membrane gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07575 YPZ3_RS07580 YPZ3_1275 lpxK lpxK 1648267 1649253 + tetraacyldisaccharide 4'-kinase transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07580 YPZ3_RS07585 YPZ3_1276 YPZ3_RS07585 1649261 1650688 - hypothetical protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07585 YPZ3_RS07590 YPZ3_RS07590 YPZ3_RS07590 1650972 1651169 - hypothetical protein gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07590 YPZ3_RS07595 YPZ3_RS07595 YPZ3_RS07595 1651407 1651616 + cold-shock protein gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07595 YPZ3_RS07600 YPZ3_RS07600 YPZ3_RS07600 1652164 1652346 + hypothetical protein gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07600 YPZ3_RS07605 YPZ3_1277 YPZ3_RS07605 1652343 1653095 + 3-deoxy-manno-octulosonate cytidylyltransferase CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07605 YPZ3_RS07610 YPZ3_1278 YPZ3_RS07610 1653458 1654351 + hypothetical protein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07610 YPZ3_RS07615 YPZ3_RS07615 YPZ3_RS07615 1654727 1654879 - hypothetical protein gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07615 YPZ3_RS07620 YPZ3_1279 YPZ3_RS07620 1655124 1655909 + S-adenosyl-L-methionine-dependent methyltransferase gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07620 YPZ3_RS07625 YPZ3_1280 YPZ3_RS07625 1655906 1657228 + chromosome partition protein MukF acts with MukB and MukE to condense the chromosome and allow for segregation during cell division gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07625 YPZ3_RS07630 YPZ3_1281 YPZ3_RS07630 1657209 1657937 + condesin subunit E acts with MukB and MukF to condense the chromosome and allow for segregation during cell division gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07630 YPZ3_RS07635 YPZ3_1282 mukB mukB 1657934 1662391 + chromosome partition protein MukB SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07635 YPZ3_RS07640 YPZ3_RS07640 YPZ3_RS07640 1662435 1662617 + invasin gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07640 YPZ3_RS07645 YPZ3_1283 YPZ3_RS07645 1662607 1663065 + transposase gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07645 YPZ3_RS07650 YPZ3_1284 YPZ3_RS07650 1663349 1665205 + murein transpeptidase gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07650 YPZ3_RS07655 YPZ3_1285 YPZ3_RS07655 1665429 1665977 + hypothetical protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07655 YPZ3_RS07660 YPZ3_1286 YPZ3_RS07660 1666038 1666685 + hypothetical protein gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07660 YPZ3_RS07665 YPZ3_1287 YPZ3_RS07665 1667109 1668299 - aromatic amino acid aminotransferase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07665 YPZ3_RS07670 YPZ3_1288 YPZ3_RS07670 1668556 1669635 - porin allows for ions and hydrophilic solutes to cross the outer membrane gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07670 YPZ3_RS07675 YPZ3_1289 YPZ3_RS07675 1669936 1671336 - asparagine--tRNA ligase gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07675 YPZ3_RS07680 YPZ3_1290 YPZ3_RS07680 1671835 1673040 - nicotinate phosphoribosyltransferase catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07680 YPZ3_RS07685 YPZ3_1291 pepN pepN 1673756 1676371 + aminopeptidase gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07685 YPZ3_RS07690 YPZ3_1292 YPZ3_RS07690 1677025 1678035 + dihydroorotate dehydrogenase catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07690 YPZ3_RS07695 YPZ3_1293 YPZ3_RS07695 1678218 1678769 + cell division protein ZapC gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07695 YPZ3_RS07700 YPZ3_1294 YPZ3_RS07700 1678795 1679904 - hypothetical protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07700 YPZ3_RS07705 YPZ3_1295 rlmL rlmL 1680007 1682127 + ribosomal RNA large subunit methyltransferase K/L catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07705 YPZ3_RS07710 YPZ3_1296 YPZ3_RS07710 1682133 1684046 + heme ABC transporter ATPase Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07710 YPZ3_RS07715 YPZ3_1297 YPZ3_RS07715 1684244 1685461 + paraquat-inducible protein A gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07715 YPZ3_RS07720 YPZ3_1298 YPZ3_RS07720 1685448 1687100 + paraquat-inducible protein B gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07720 YPZ3_RS07725 YPZ3_1299 YPZ3_RS07725 1687097 1687675 + lipoprotein gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07725 YPZ3_RS07730 YPZ3_RS07730 YPZ3_RS07730 1687724 1687864 + hypothetical protein gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07730 YPZ3_RS07735 YPZ3_RS07735 YPZ3_RS07735 1687945 1688112 + ribosome modulation factor gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07735 YPZ3_RS07740 YPZ3_RS07740 YPZ3_RS07740 1688165 1688320 + invasin gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07740 YPZ3_RS07745 YPZ3_1300 YPZ3_RS07745 1688310 1688768 + transposase gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07745 YPZ3_RS07750 YPZ3_1301 YPZ3_RS07750 1688885 1689859 - 3-oxoacyl-ACP synthase FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07750 YPZ3_RS07755 YPZ3_1302 YPZ3_RS07755 1689929 1690708 - transposase gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07755 YPZ3_RS07760 YPZ3_1303 YPZ3_RS07760 1690708 1691730 - transposase gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07760 YPZ3_RS07765 YPZ3_1304 YPZ3_RS07765 1691744 1692118 - hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07765 YPZ3_RS07770 YPZ3_RS07770 YPZ3_RS07770 1692364 1692552 + membrane protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07770 YPZ3_RS07775 YPZ3_1305 YPZ3_RS07775 1692818 1693336 - 3-hydroxydecanoyl-ACP dehydratase catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07775 YPZ3_RS07780 YPZ3_1306 YPZ3_RS07780 1693405 1695156 - ATP-dependent protease gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07780 YPZ3_RS07785 YPZ3_1307 YPZ3_RS07785 1695367 1695822 + macrodomain Ter protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07785 YPZ3_RS07790 YPZ3_1308 YPZ3_RS07790 1695991 1696449 - transposase gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07790 YPZ3_RS07795 YPZ3_RS07795 YPZ3_RS07795 1696439 1696594 - invasin gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07795 YPZ3_RS07800 YPZ3_1309 YPZ3_RS07800 1696639 1697700 - outer membrane protein A OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07800 YPZ3_RS07805 YPZ3_1310 YPZ3_RS07805 1698058 1698564 - cell division inhibitor SulA gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07805 YPZ3_RS07810 YPZ3_1311 YPZ3_RS07810 1698793 1699428 + DNA transformation protein tfoX gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07810 YPZ3_RS07815 YPZ3_1312 YPZ3_RS07815 1699530 1701668 - membrane protein gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07815 YPZ3_RS07820 YPZ3_1313 YPZ3_RS07820 1701698 1702144 - membrane protein gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07820 YPZ3_RS07825 YPZ3_1314 helD helD 1702338 1704392 + DNA helicase IV catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07825 YPZ3_RS07830 YPZ3_1315 YPZ3_RS07830 1704453 1704917 - methylglyoxal synthase gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07830 YPZ3_RS07835 YPZ3_1316 YPZ3_RS07835 1705096 1705776 - hypothetical protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07835 YPZ3_RS07840 YPZ3_1317 YPZ3_RS07840 1706092 1706508 + hypothetical protein gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07840 YPZ3_RS07845 YPZ3_1318 YPZ3_RS07845 1706617 1706934 - heat-shock protein HspQ gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07845 YPZ3_RS07850 YPZ3_1319 YPZ3_RS07850 1706995 1708185 - ribosomal RNA large subunit methyltransferase I SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07850 YPZ3_RS07855 YPZ3_RS07855 YPZ3_RS07855 1708279 1708557 + acylphosphatase catalyzes the hydrolysis of acylphosphate gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07855 YPZ3_RS07860 YPZ3_1320 YPZ3_RS07860 1708609 1708938 - sulfurtransferase TusE transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07860 YPZ3_RS07865 YPZ3_t18 YPZ3_RS07865 1709179 1709266 + tRNA-Ser tRNA gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07865 YPZ3_RS07870 YPZ3_RS07870 YPZ3_RS07870 1709686 1709973 + integrase gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07870 YPZ3_RS07875 YPZ3_1321 YPZ3_RS07875 1710343 1710699 + cytotoxic necrotizing factor 1 domain protein gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07875 YPZ3_RS07880 YPZ3_RS07880 YPZ3_RS07880 1710733 1710984 + cytotoxic necrotizing factor 1 domain protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07880 YPZ3_RS07885 YPZ3_1322 YPZ3_RS07885 1710999 1712150 + cytotoxic necrotizing factor 1 domain protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07885 YPZ3_RS07890 YPZ3_1323 YPZ3_RS07890 1712584 1715001 - oxidoreductase gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07890 YPZ3_RS07895 YPZ3_1324 YPZ3_RS07895 1715155 1715901 - MFS transporter gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07895 YPZ3_RS07900 YPZ3_RS07900 YPZ3_RS07900 1716632 1716850 + hypothetical protein gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07900 YPZ3_RS07905 YPZ3_1325 YPZ3_RS07905 1717114 1717638 + 3-hydroxyacyl-ACP dehydratase gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07905 YPZ3_RS07910 YPZ3_1326 YPZ3_RS07910 1717628 1718911 + beta-ketoacyl-ACP synthase gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07910 YPZ3_RS07915 YPZ3_1327 YPZ3_RS07915 1718913 1719650 + 3-ketoacyl-ACP reductase gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07915 YPZ3_RS07920 YPZ3_1328 YPZ3_RS07920 1719666 1720904 + hydroxymethylglutaryl-CoA synthase gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07920 YPZ3_RS07925 YPZ3_1329 YPZ3_RS07925 1720897 1721616 + enoyl-CoA hydratase gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07925 YPZ3_RS07930 YPZ3_1330 YPZ3_RS07930 1721618 1722370 + enoyl-CoA hydratase gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07930 YPZ3_RS07935 YPZ3_1331 YPZ3_RS07935 1722373 1723161 + 3-oxoacyl-ACP reductase gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07935 YPZ3_RS07940 YPZ3_1332 YPZ3_RS07940 1723356 1723688 + hypothetical protein gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07940 YPZ3_RS07945 YPZ3_RS07945 YPZ3_RS07945 1723726 1723974 + acyl carrier protein gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07945 YPZ3_RS07950 YPZ3_1333 YPZ3_RS07950 1724073 1724921 + acyltransferase gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07950 YPZ3_RS07955 YPZ3_RS07955 YPZ3_RS07955 1725078 1725245 + hypothetical protein gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07955 YPZ3_RS07960 YPZ3_1334 YPZ3_RS07960 1725910 1726410 + hypothetical protein gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07960 YPZ3_RS07965 YPZ3_1335 YPZ3_RS07965 1726453 1727997 + hypothetical protein gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07965 YPZ3_RS07970 YPZ3_1336 YPZ3_RS07970 1728009 1729361 + hypothetical protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07970 YPZ3_RS07975 YPZ3_1337 YPZ3_RS07975 1729358 1730044 + hypothetical protein gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07975 YPZ3_RS07980 YPZ3_1338 YPZ3_RS07980 1730044 1731780 + membrane protein gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07980 YPZ3_RS07985 YPZ3_1339 YPZ3_RS07985 1731784 1732275 + hypothetical protein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07985 YPZ3_RS07990 YPZ3_1340 YPZ3_RS07990 1732693 1735341 + ATPase gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07990 YPZ3_RS07995 YPZ3_1341 YPZ3_RS07995 1735338 1737686 + type IV secretion protein Rhs gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS07995 YPZ3_RS08000 YPZ3_1342 YPZ3_RS08000 1737701 1739923 + hydroxyethylthiazole kinase gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08000 YPZ3_RS08005 YPZ3_RS08005 YPZ3_RS08005 1740067 1740423 + hypothetical protein gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08005 YPZ3_RS08010 YPZ3_RS08010 YPZ3_RS08010 1740597 1740791 + hypothetical protein gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08010 YPZ3_RS08015 YPZ3_RS08015 YPZ3_RS08015 1740820 1741095 + transposase gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08015 YPZ3_RS08020 YPZ3_RS08020 YPZ3_RS08020 1741149 1741484 + transposase gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08020 YPZ3_RS08025 YPZ3_1343 YPZ3_RS08025 1742016 1742651 + type IV secretion protein Rhs gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08025 YPZ3_RS08030 YPZ3_1344 YPZ3_RS08030 1742667 1744967 + membrane protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08030 YPZ3_RS08035 YPZ3_1345 YPZ3_RS08035 1744964 1745737 + hypothetical protein gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08035 YPZ3_RS08040 YPZ3_RS08040 YPZ3_RS08040 1745891 1746151 + multidrug ABC transporter ATPase gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08040 YPZ3_RS08045 YPZ3_1346 YPZ3_RS08045 1746167 1748350 + hypothetical protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08045 YPZ3_RS08050 YPZ3_RS08050 YPZ3_RS08050 1748523 1748993 + hypothetical protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08050 YPZ3_RS08055 YPZ3_1347 YPZ3_RS08055 1749726 1750046 - transposase gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08055 YPZ3_RS08060 YPZ3_1348 YPZ3_RS08060 1751158 1752390 + hypothetical protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08060 YPZ3_RS08065 YPZ3_1349 YPZ3_RS08065 1752387 1755809 + type VI secretion protein VasK gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08065 YPZ3_RS08070 YPZ3_1350 YPZ3_RS08070 1755853 1757454 + hypothetical protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08070 YPZ3_RS08075 YPZ3_1351 YPZ3_RS08075 1757472 1758530 + PAAR domain protein gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08075 YPZ3_RS08080 YPZ3_1352 YPZ3_RS08080 1758545 1759000 + hypothetical protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08080 YPZ3_RS08085 YPZ3_1353 YPZ3_RS08085 1759221 1760984 + type VI secretion protein ImpG gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08085 YPZ3_RS08090 YPZ3_1354 YPZ3_RS08090 1760948 1762033 + hypothetical protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08090 YPZ3_RS08095 YPZ3_1355 YPZ3_RS08095 1762008 1762589 + type VI secretion protein gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08095 YPZ3_RS08100 YPZ3_1356 YPZ3_RS08100 1762589 1763041 + hypothetical protein gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08100 YPZ3_RS08105 YPZ3_1357 YPZ3_RS08105 1763066 1764433 + membrane protein gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08105 YPZ3_RS08110 YPZ3_1358 YPZ3_RS08110 1764645 1765268 - hypothetical protein gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08110 YPZ3_RS08115 YPZ3_1359 YPZ3_RS08115 1765975 1767546 + heme ABC transporter ATP-binding protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08115 YPZ3_RS08120 YPZ3_1360 YPZ3_RS08120 1767774 1768427 + hypothetical protein gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08120 YPZ3_RS08125 YPZ3_1361 YPZ3_RS08125 1768471 1769679 - transposase gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08125 YPZ3_RS08130 YPZ3_1362 YPZ3_RS08130 1769815 1770585 - molybdopterin-synthase adenylyltransferase gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08130 YPZ3_RS08135 YPZ3_1363 YPZ3_RS08135 1770587 1771861 - molybdopterin biosynthesis protein MoeA is involved in the formation of active molybdenum cofactor and the chelation of molybdenum gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08135 YPZ3_RS08140 YPZ3_1364 YPZ3_RS08140 1772396 1773706 - radical SAM/SPASM domain-containing protein gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08140 YPZ3_RS08145 YPZ3_1365 YPZ3_RS08145 1773716 1774384 - ABC transporter ATP-binding protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08145 YPZ3_RS08150 YPZ3_1366 YPZ3_RS08150 1774386 1775648 - RND transporter gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08150 YPZ3_RS08155 YPZ3_1367 YPZ3_RS08155 1775650 1778010 - membrane protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08155 YPZ3_RS08160 YPZ3_RS08160 YPZ3_RS08160 1778094 1778294 - hypothetical protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08160 YPZ3_RS08170 YPZ3_1368 YPZ3_RS08170 1778563 1779405 - S-formylglutathione hydrolase gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08170 YPZ3_RS08175 YPZ3_1369 YPZ3_RS08175 1779426 1780565 - S-(hydroxymethyl)glutathione dehydrogenase catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08175 YPZ3_RS08180 YPZ3_1370 YPZ3_RS08180 1780839 1781708 - LysR family transcriptional regulator gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08180 YPZ3_RS08185 YPZ3_1371 YPZ3_RS08185 1781844 1782995 + MFS transporter gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08185 YPZ3_RS08190 YPZ3_1372 folE folE 1783179 1783841 + GTP cyclohydrolase 1 involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08190 YPZ3_RS08195 YPZ3_1373 YPZ3_RS08195 1783896 1785062 + membrane protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08195 YPZ3_RS08200 YPZ3_1374 YPZ3_RS08200 1785810 1786802 + methyl-galactoside ABC transporter substrate-binding protein wtih MglAC is involved in the transport of beta-methylgalactoside gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08200 YPZ3_RS08205 YPZ3_1375 YPZ3_RS08205 1787032 1788552 + galactose/methyl galactoside import ATP-binding protein MglA gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08205 YPZ3_RS08210 YPZ3_1376 mglC mglC 1788573 1789583 + beta-methylgalactoside transporter ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08210 YPZ3_RS08215 YPZ3_1377 YPZ3_RS08215 1790028 1790765 - vancomycin high temperature exclusion protein involved in vancomycin sensitivity and other barrier functions of the cell envelope gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08215 YPZ3_RS08220 YPZ3_1378 YPZ3_RS08220 1791046 1792743 - NAD-dependent malic enzyme malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08220 YPZ3_RS08225 YPZ3_1379 YPZ3_RS08225 1793099 1793983 - cytidine deaminase Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08225 YPZ3_RS08230 YPZ3_1380 YPZ3_RS08230 1794309 1795004 - membrane protein gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08230 YPZ3_RS08235 YPZ3_1381 YPZ3_RS08235 1795001 1795408 - hypothetical protein gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08235 YPZ3_RS08240 YPZ3_1382 YPZ3_RS08240 1795650 1796831 - multidrug resistance protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08240 YPZ3_RS08245 YPZ3_1383 YPZ3_RS08245 1797164 1798417 - hypothetical protein gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08245 YPZ3_RS08250 YPZ3_1384 YPZ3_RS08250 1798435 1799511 - sugar ABC transporter substrate-binding protein gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08250 YPZ3_RS08255 YPZ3_1385 YPZ3_RS08255 1800209 1800871 + membrane protein gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08255 YPZ3_RS08260 YPZ3_RS08260 YPZ3_RS08260 1800911 1801099 + hypothetical protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08260 YPZ3_RS08265 YPZ3_1386 YPZ3_RS08265 1801089 1801547 + transposase gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08265 YPZ3_RS08270 YPZ3_1387 metG metG 1801711 1803738 - methionine--tRNA ligase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08270 YPZ3_RS08275 YPZ3_1388 YPZ3_RS08275 1804003 1805115 + ATPase gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08275 YPZ3_RS08280 YPZ3_1389 YPZ3_RS08280 1805360 1806001 + uridine kinase gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08280 YPZ3_RS08285 YPZ3_1390 YPZ3_RS08285 1806106 1806687 + deoxycytidine triphosphate deaminase gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08285 YPZ3_RS08290 YPZ3_1391 YPZ3_RS08290 1806874 1808730 + membrane assembly protein AsmA gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08290 YPZ3_RS08295 YPZ3_1392 YPZ3_RS08295 1808875 1810488 - membrane protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08295 YPZ3_RS08300 YPZ3_1393 YPZ3_RS08300 1810930 1811709 + iron reductase gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08300 YPZ3_RS08305 YPZ3_1394 YPZ3_RS08305 1811861 1813408 + cytochrome C biogenesis protein CcmH gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08305 YPZ3_RS08310 YPZ3_1395 YPZ3_RS08310 1813443 1814741 + lysine N6-hydroxylase/L-ornithine N5-oxygenase family gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08310 YPZ3_RS08315 YPZ3_1396 YPZ3_RS08315 1814741 1815319 + siderophore biosynthesis protein gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08315 YPZ3_RS08320 YPZ3_1397 YPZ3_RS08320 1815316 1817160 + siderophore biosynthetic enzyme gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08320 YPZ3_RS08325 YPZ3_1398 YPZ3_RS08325 1817269 1818087 - ABC transporter with FepBDE is involved in the transport of ferric enterobactin gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08325 YPZ3_RS08330 YPZ3_1399 YPZ3_RS08330 1818114 1819154 - iron ABC transporter permease gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08330 YPZ3_RS08335 YPZ3_1400 YPZ3_RS08335 1819141 1820181 - iron ABC transporter permease gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08335 YPZ3_RS08340 YPZ3_1401 YPZ3_RS08340 1820178 1821257 - iron-siderophore ABC transporter substrate-binding protein gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08340 YPZ3_RS08345 YPZ3_1402 YPZ3_RS08345 1821347 1823608 - TonB-dependent receptor gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08345 YPZ3_RS08350 YPZ3_1403 YPZ3_RS08350 1823821 1825635 - siderophore biosynthesis protein%2C IucA/IucC family gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08350 YPZ3_RS08355 YPZ3_1404 YPZ3_RS08355 1826581 1827471 + UTP--glucose-1-phosphate uridylyltransferase together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08355 YPZ3_RS08360 YPZ3_1405 YPZ3_RS08360 1827555 1828448 + UTP--glucose-1-phosphate uridylyltransferase gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08360 YPZ3_RS08365 YPZ3_1406 YPZ3_RS08365 1828834 1830243 + 6-phosphogluconate dehydrogenase catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08365 YPZ3_RS08370 YPZ3_1407 YPZ3_RS08370 1830443 1831057 - histidine biosynthesis bifunctional protein HisIE catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08370 YPZ3_RS08375 YPZ3_1408 YPZ3_RS08375 1831051 1831827 - imidazole glycerol phosphate synthase subunit HisF gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08375 YPZ3_RS08380 YPZ3_1409 YPZ3_RS08380 1831809 1832546 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08380 YPZ3_RS08385 YPZ3_1410 hisH hisH 1832552 1833142 - imidazole glycerol phosphate synthase subunit HisH with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08385 YPZ3_RS08390 YPZ3_1411 YPZ3_RS08390 1833142 1834209 - histidine biosynthesis bifunctional protein HisB catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08390 YPZ3_RS08395 YPZ3_1412 YPZ3_RS08395 1834206 1835354 - histidinol-phosphate aminotransferase catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08395 YPZ3_RS08400 YPZ3_1413 hisD hisD 1835357 1836688 - histidinol dehydrogenase catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08400 YPZ3_RS08405 YPZ3_1414 hisG hisG 1836692 1837591 - ATP phosphoribosyltransferase long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08405 YPZ3_RS08410 YPZ3_1415 YPZ3_RS08410 1838297 1839124 + hypothetical protein gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08410 YPZ3_RS08415 YPZ3_1416 YPZ3_RS08415 1839279 1839713 - gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08415 YPZ3_RS08420 YPZ3_1417 YPZ3_RS08420 1839958 1840953 - sugar ABC transporter permease gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08420 YPZ3_RS08425 YPZ3_1418 YPZ3_RS08425 1840950 1841639 - sugar ABC transporter gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08425 YPZ3_RS08430 YPZ3_1419 YPZ3_RS08430 1841597 1842490 - sugar ABC transporter gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08430 YPZ3_RS08435 YPZ3_1420 YPZ3_RS08435 1842776 1843867 + oxidoreductase member of the iron-containing alcohol dehydrogenase family gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08435 YPZ3_RS08440 YPZ3_RS08440 YPZ3_RS08440 1844122 1844337 + hypothetical protein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08440 YPZ3_RS08445 YPZ3_1421 YPZ3_RS08445 1844327 1845718 + putrescine/spermidine ABC transporter gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08445 YPZ3_RS08450 YPZ3_1422 sbcB sbcB 1846455 1847885 - exonuclease I Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08450 YPZ3_RS08455 YPZ3_1423 YPZ3_RS08455 1848178 1849287 + thiamine biosynthesis protein ThiF gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08455 YPZ3_RS08460 YPZ3_1424 YPZ3_RS08460 1849721 1850038 + hypothetical protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08460 YPZ3_RS08465 YPZ3_1425 YPZ3_RS08465 1850409 1851617 + transposase gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08465 YPZ3_RS08470 YPZ3_1426 YPZ3_RS08470 1851580 1854732 - adhesin gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08470 YPZ3_RS08475 YPZ3_1427 YPZ3_RS08475 1855757 1857061 + MFS transporter gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08475 YPZ3_RS08480 YPZ3_1428 YPZ3_RS08480 1857070 1857492 - thiol-disulfide oxidoreductase gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08480 YPZ3_RS08485 YPZ3_1429 YPZ3_RS08485 1857920 1858660 + oxidoreductase gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08485 YPZ3_RS08490 YPZ3_1430 YPZ3_RS08490 1858708 1859550 + hydrolase gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08490 YPZ3_RS08495 YPZ3_1431 YPZ3_RS08495 1859582 1860859 + fuconate dehydratase gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08495 YPZ3_RS08500 YPZ3_1432 lldD lldD 1861156 1862301 + lactate dehydrogenase flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08500 YPZ3_RS08505 YPZ3_1433 YPZ3_RS08505 1862506 1863873 - argininosuccinate synthase catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08505 YPZ3_RS08510 YPZ3_1434 YPZ3_RS08510 1864200 1865597 + MATE family multidrug exporter gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08510 YPZ3_RS08515 YPZ3_1435 YPZ3_RS08515 1865625 1866965 - sugar transporter gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08515 YPZ3_RS08520 YPZ3_1436 YPZ3_RS08520 1867001 1867882 - hypothetical protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08520 YPZ3_RS08525 YPZ3_1437 YPZ3_RS08525 1868459 1869154 + hypothetical protein gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08525 YPZ3_RS08530 YPZ3_1438 YPZ3_RS08530 1869244 1869783 + hypothetical protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08530 YPZ3_RS08535 YPZ3_t19 YPZ3_RS08535 1870129 1870204 - tRNA-Asn tRNA gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08535 YPZ3_RS08540 YPZ3_1439 YPZ3_RS08540 1870650 1871279 - transcriptional regulator gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08540 YPZ3_RS08545 YPZ3_1440 YPZ3_RS08545 1871537 1872829 - membrane protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08545 YPZ3_RS08550 YPZ3_1441 YPZ3_RS08550 1872849 1873355 - C4-dicarboxylate ABC transporter gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08550 YPZ3_RS08555 YPZ3_1442 YPZ3_RS08555 1873479 1874471 - C4-dicarboxylate ABC transporter gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08555 YPZ3_RS08560 YPZ3_1443 YPZ3_RS08560 1874994 1875734 + 4'-phosphopantetheinyl transferase gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08560 YPZ3_RS08565 YPZ3_RS08565 YPZ3_RS08565 1875940 1876104 - hypothetical protein gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08565 YPZ3_RS08570 YPZ3_1444 YPZ3_RS08570 1876121 1878247 - alpha-galactosidase gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08570 YPZ3_RS08575 YPZ3_1445 lacY lacY 1878325 1879602 - galactoside permease lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08575 YPZ3_RS08580 YPZ3_1446 YPZ3_RS08580 1879627 1880835 + transposase gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08580 YPZ3_RS08585 YPZ3_1447 YPZ3_RS08585 1881086 1881751 - 2-deoxyglucose-6-phosphatase YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08585 YPZ3_RS08590 YPZ3_1448 YPZ3_RS08590 1882162 1882716 + yfeABCD regulator yfeE gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08590 YPZ3_RS08595 YPZ3_1449 YPZ3_RS08595 1882845 1883720 - hypothetical protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08595 YPZ3_RS08600 YPZ3_RS08600 YPZ3_RS08600 1883745 1883957 - membrane protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08600 YPZ3_RS08605 YPZ3_1450 YPZ3_RS08605 1884025 1884918 - chelated iron transport system membrane protein YfeD gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08605 YPZ3_RS08610 YPZ3_1451 YPZ3_RS08610 1884915 1885799 - chelated iron transport system membrane protein YfeC gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08610 YPZ3_RS08615 YPZ3_1452 YPZ3_RS08615 1885799 1886689 - chelated iron transport system membrane protein YfeB gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08615 YPZ3_RS08620 YPZ3_1453 YPZ3_RS08620 1886686 1887654 - iron-binding protein gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08620 YPZ3_RS08625 YPZ3_1454 YPZ3_RS08625 1887866 1888528 + lytic transglycosylase gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08625 YPZ3_RS08630 YPZ3_1455 YPZ3_RS08630 1888650 1889333 - membrane protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08630 YPZ3_RS08635 YPZ3_RS08635 YPZ3_RS08635 1889652 1889903 + hypothetical protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08635 YPZ3_RS08640 YPZ3_RS08640 YPZ3_RS08640 1889975 1890352 - membrane protein gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08640 YPZ3_RS08645 YPZ3_RS08645 YPZ3_RS08645 1890662 1890874 - hypothetical protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08645 YPZ3_RS08650 YPZ3_1456 thrS thrS 1891265 1893193 + threonine--tRNA ligase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08650 YPZ3_RS08655 YPZ3_1457 YPZ3_RS08655 1893398 1893748 + translation initiation factor IF-3 gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08655 YPZ3_RS08660 YPZ3_RS08660 YPZ3_RS08660 1893845 1894042 + 50S ribosomal protein L35 gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08660 YPZ3_RS08665 YPZ3_1458 rplT rplT 1894080 1894436 + 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08665 YPZ3_RS08670 YPZ3_1459 YPZ3_RS08670 1894935 1895918 + phenylalanine--tRNA ligase subunit alpha gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08670 YPZ3_RS08675 YPZ3_1460 pheT pheT 1895932 1898319 + phenylalanine--tRNA ligase subunit beta catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08675 YPZ3_RS08680 YPZ3_RS08680 ihfA ihfA 1898324 1898620 + integration host factor subunit alpha This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08680 YPZ3_RS08685 YPZ3_1461 YPZ3_RS08685 1898954 1899412 + hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08685 YPZ3_RS08690 YPZ3_1462 YPZ3_RS08690 1899639 1900646 + vitamin B12 import system permease BtuC gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08690 YPZ3_RS08695 YPZ3_1463 btuE btuE 1900716 1901270 + glutathione peroxidase similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08695 YPZ3_RS08700 YPZ3_1464 YPZ3_RS08700 1901295 1902053 + vitamin B12 ABC transporter ATP-binding protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08700 YPZ3_RS08705 YPZ3_1465 YPZ3_RS08705 1902403 1903557 + UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08705 YPZ3_RS08710 YPZ3_1466 YPZ3_RS08710 1903544 1904527 + undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08710 YPZ3_RS08715 YPZ3_1467 YPZ3_RS08715 1904524 1906527 + bifunctional polymyxin resistance protein ArnA Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08715 YPZ3_RS08720 YPZ3_1468 YPZ3_RS08720 1906524 1907429 + 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08720 YPZ3_RS08725 YPZ3_1469 arnT arnT 1907426 1909090 + undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08725 YPZ3_RS08730 YPZ3_1470 YPZ3_RS08730 1909087 1909431 + 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08730 YPZ3_RS08735 YPZ3_1471 YPZ3_RS08735 1909428 1909814 + 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08735 YPZ3_RS08740 YPZ3_1472 YPZ3_RS08740 1910094 1910558 + lipoprotein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08740 YPZ3_RS08745 YPZ3_1473 lplA lplA 1910683 1911699 + lipoate-protein ligase A Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08745 YPZ3_RS08750 YPZ3_RS08750 YPZ3_RS08750 1911751 1913214 + hypothetical protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08750 YPZ3_RS08755 YPZ3_1476 YPZ3_RS08755 1913383 1914429 - phospho-2-dehydro-3-deoxyheptonate aldolase gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08755 YPZ3_RS08760 YPZ3_1477 YPZ3_RS08760 1914586 1915407 - PEP synthetase regulatory protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08760 YPZ3_RS08765 YPZ3_1478 YPZ3_RS08765 1915744 1918128 + phosphoenolpyruvate synthase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08765 YPZ3_RS08770 YPZ3_1479 YPZ3_RS08770 1918727 1919830 - membrane protein YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08770 YPZ3_RS08775 YPZ3_1480 YPZ3_RS08775 1920451 1923507 + membrane protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08775 YPZ3_RS08780 YPZ3_1481 YPZ3_RS08780 1923629 1924045 + acyl-CoA esterase required for efficient enterobactin production gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08780 YPZ3_RS08785 YPZ3_RS08785 YPZ3_RS08785 1924304 1924462 + hypothetical protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08785 YPZ3_RS08790 YPZ3_1482 sufA sufA 1924640 1925011 + (Fe-S)-cluster assembly protein functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08790 YPZ3_RS08795 YPZ3_1483 YPZ3_RS08795 1925026 1926537 + Fe-S cluster assembly protein SufB with SufCD activates cysteine desulfurase SufS gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08795 YPZ3_RS08800 YPZ3_1484 sufC sufC 1926723 1927469 + Fe-S cluster assembly ATPase SufC part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08800 YPZ3_RS08805 YPZ3_1485 YPZ3_RS08805 1927444 1928769 + Fe-S cluster assembly protein SufD gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08805 YPZ3_RS08810 YPZ3_1486 YPZ3_RS08810 1928766 1929986 + cysteine desulfurase gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08810 YPZ3_RS08815 YPZ3_1487 YPZ3_RS08815 1930075 1930497 + cysteine desulfuration protein SufE Acts with SufS to catalyze the formation of L-alanine from L-cysteine gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08815 YPZ3_RS08820 YPZ3_1488 YPZ3_RS08820 1930768 1931787 + murein transpeptidase gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08820 YPZ3_RS08825 YPZ3_1489 YPZ3_RS08825 1931831 1932610 - transposase gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08825 YPZ3_RS08830 YPZ3_1490 YPZ3_RS08830 1932610 1933632 - transposase gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08830 YPZ3_RS08835 YPZ3_1491 YPZ3_RS08835 1934214 1934672 - transposase gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08835 YPZ3_RS08840 YPZ3_RS08840 YPZ3_RS08840 1934662 1934832 - invasin gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08840 YPZ3_RS08845 YPZ3_RS08845 YPZ3_RS08845 1934863 1935099 - hypothetical protein major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08845 YPZ3_RS08850 YPZ3_1492 YPZ3_RS08850 1935420 1936832 - pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08850 YPZ3_RS08855 YPZ3_t20 YPZ3_RS08855 1937408 1937484 - tRNA-Val tRNA gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08855 YPZ3_RS08860 YPZ3_t21 YPZ3_RS08860 1937544 1937620 - tRNA-Val tRNA gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08860 YPZ3_RS08865 YPZ3_1493 YPZ3_RS08865 1937863 1939236 - multidrug resistance protein MdtK NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08865 YPZ3_RS08870 YPZ3_1494 YPZ3_RS08870 1939485 1940141 + riboflavin synthase subunit alpha catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08870 YPZ3_RS08875 YPZ3_1495 YPZ3_RS08875 1940192 1941343 - cyclopropane fatty acyl phospholipid synthase catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08875 YPZ3_RS08880 YPZ3_1496 YPZ3_RS08880 1941823 1943025 - Bcr/CflA family drug resistance efflux transporter uncharacterized member of the major facilitator superfamily (MFS) gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08880 YPZ3_RS08885 YPZ3_1497 YPZ3_RS08885 1943315 1944247 + LysR family transcriptional regulator gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08885 YPZ3_RS08890 YPZ3_1498 YPZ3_RS08890 1944336 1945361 - PurR family transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08890 YPZ3_RS08895 YPZ3_1499 YPZ3_RS08895 1945888 1946466 - superoxide dismutase SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08895 YPZ3_RS08900 YPZ3_1500 YPZ3_RS08900 1946844 1947695 - hydrolase gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08900 YPZ3_RS08905 YPZ3_RS08905 YPZ3_RS08905 1947814 1948035 + hypothetical protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08905 YPZ3_RS08910 YPZ3_1501 YPZ3_RS08910 1948135 1948485 + glutaredoxin gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08910 YPZ3_RS08915 YPZ3_1502 YPZ3_RS08915 1948794 1949474 - ribonuclease T Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08915 YPZ3_RS08920 YPZ3_1503 YPZ3_RS08920 1949553 1949960 - lactoylglutathione lyase Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08920 YPZ3_RS08925 YPZ3_1504 YPZ3_RS08925 1950233 1953187 + toxin gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08925 YPZ3_RS08930 YPZ3_1505 YPZ3_RS08930 1953408 1954505 - N-ethylmaleimide reductase FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08930 YPZ3_RS08935 YPZ3_1506 YPZ3_RS08935 1954593 1955192 - TetR family transcriptional regulator represses nemA which is involved in degradation of N-ethylmaleimide gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08935 YPZ3_RS08940 YPZ3_1507 YPZ3_RS08940 1955415 1957052 - metal dependent hydrolase gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08940 YPZ3_RS08945 YPZ3_RS08945 YPZ3_RS08945 1957226 1957465 + oxidoreductase gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08945 YPZ3_RS08950 YPZ3_1508 YPZ3_RS08950 1957597 1958493 + oxidoreductase gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08950 YPZ3_RS08955 YPZ3_1509 YPZ3_RS08955 1959291 1959722 + SlyA family transcriptional regulator Transcription regulator that can both activate or repress expression gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08955 YPZ3_RS08960 YPZ3_1510 YPZ3_RS08960 1959866 1960333 - lipoprotein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08960 YPZ3_RS08965 YPZ3_1511 anmK anmK 1960889 1962001 + anhydro-N-acetylmuramic acid kinase catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08965 YPZ3_RS08970 YPZ3_1512 YPZ3_RS08970 1962059 1962373 + lipoprotein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08970 YPZ3_RS08975 YPZ3_1513 YPZ3_RS08975 1962464 1963117 + pyridoxine/pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08975 YPZ3_RS08980 YPZ3_1514 YPZ3_RS08980 1963299 1964573 + tyrosine--tRNA ligase gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08980 YPZ3_RS08985 YPZ3_1515 YPZ3_RS08985 1964728 1965588 + pyridoxamine kinase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08985 YPZ3_RS08990 YPZ3_1516 YPZ3_RS08990 1965648 1966253 - glutathionine S-transferase gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08990 YPZ3_RS08995 YPZ3_RS08995 YPZ3_RS08995 1966498 1966761 - hypothetical protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS08995 YPZ3_RS09000 YPZ3_1517 YPZ3_RS09000 1967007 1967597 - membrane protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09000 YPZ3_RS09005 YPZ3_1518 tppB tppB 1967852 1969357 - dipeptide and tripeptide permease A mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09005 YPZ3_RS09010 YPZ3_1519 YPZ3_RS09010 1970000 1971280 - hypothetical protein gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09010 YPZ3_RS09015 YPZ3_1520 YPZ3_RS09015 1971670 1972485 - peptide ABC transporter ATP-binding protein gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09015 YPZ3_RS09020 YPZ3_1521 YPZ3_RS09020 1972485 1973477 - peptide ABC transporter ATP-binding protein involved in resistance to antimibial peptides gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09020 YPZ3_RS09025 YPZ3_1522 YPZ3_RS09025 1973477 1974367 - peptide ABC transporter permease gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09025 YPZ3_RS09030 YPZ3_1523 YPZ3_RS09030 1974354 1975319 - peptide ABC transporter permease gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09030 YPZ3_RS09035 YPZ3_1524 YPZ3_RS09035 1975316 1976962 - peptide ABC transporter substrate-binding protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09035 YPZ3_RS09040 YPZ3_RS09040 YPZ3_RS09040 1977098 1977276 - hypothetical protein gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09040 YPZ3_RS09045 YPZ3_RS09045 YPZ3_RS09045 1977463 1977630 + invasin gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09045 YPZ3_RS09050 YPZ3_1525 YPZ3_RS09050 1977620 1978078 + transposase gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09050 YPZ3_RS09055 YPZ3_1526 pspF pspF 1978243 1979271 - transcriptional regulator transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09055 YPZ3_RS09060 YPZ3_1527 YPZ3_RS09060 1979516 1980181 + phage-shock protein involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09060 YPZ3_RS09065 YPZ3_RS09065 pspB pspB 1980343 1980570 + phage shock protein B DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09065 YPZ3_RS09070 YPZ3_1528 YPZ3_RS09070 1980570 1980929 + transcriptional regulator with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09070 YPZ3_RS09075 YPZ3_RS09075 YPZ3_RS09075 1981017 1981256 + phage-shock protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09075 YPZ3_RS09080 YPZ3_1529 YPZ3_RS09080 1981237 1982634 + hypothetical protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09080 YPZ3_RS09085 YPZ3_1530 YPZ3_RS09085 1982631 1983692 + membrane protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09085 YPZ3_RS09090 YPZ3_1531 YPZ3_RS09090 1983702 1984160 - hypothetical protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09090 YPZ3_RS09095 YPZ3_1532 YPZ3_RS09095 1984222 1984668 - TIGR02293 family toxin-antitoxin system antitoxin component gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09095 YPZ3_RS09100 YPZ3_1533 YPZ3_RS09100 1985003 1986580 + transcriptional regulator regulates genes involved in the biosynthesis and transport of aromatic amino acids gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09100 YPZ3_RS09105 YPZ3_1534 YPZ3_RS09105 1986727 1987185 - transposase gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09105 YPZ3_RS09110 YPZ3_1535 tpx tpx 1987438 1987941 - thiol peroxidase antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09110 YPZ3_RS09115 YPZ3_1536 YPZ3_RS09115 1988104 1989078 + mandelate racemase catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09115 YPZ3_RS09120 YPZ3_1537 YPZ3_RS09120 1989120 1989827 - murein peptide amidase A gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09120 YPZ3_RS09125 YPZ3_1538 YPZ3_RS09125 1990268 1991884 + peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09125 YPZ3_RS09130 YPZ3_1539 zntB zntB 1992127 1993110 + zinc transporter ZntB gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09130 YPZ3_RS09135 YPZ3_1540 YPZ3_RS09135 1993484 1994323 - hypothetical protein gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09135 YPZ3_RS09140 YPZ3_1541 YPZ3_RS09140 1994635 1995639 - alpha/beta hydrolase gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09140 YPZ3_RS09145 YPZ3_1542 YPZ3_RS09145 1995910 1996851 - tRNA 2-thiocytidine biosynthesis protein TtcA TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C) gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09145 YPZ3_RS09150 YPZ3_1543 YPZ3_RS09150 1997126 2000659 - pyruvate-flavodoxin oxidoreductase gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09150 YPZ3_RS09155 YPZ3_1544 YPZ3_RS09155 2001138 2001470 + multidrug DMT transporter gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09155 YPZ3_RS09160 YPZ3_1545 YPZ3_RS09160 2001530 2002189 - methyltransferase gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09160 YPZ3_RS09165 YPZ3_1546 YPZ3_RS09165 2002504 2002815 + hypothetical protein gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09165 YPZ3_RS09170 YPZ3_1547 YPZ3_RS09170 2002873 2003325 - heat-inducible protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09170 YPZ3_RS09175 YPZ3_1548 YPZ3_RS09175 2003395 2004387 - lactate dehydrogenase fermentative%3B catalyzes the formationof pyruvate from lactate gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09175 YPZ3_RS09180 YPZ3_1549 YPZ3_RS09180 2004653 2007349 + hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09180 YPZ3_RS09185 YPZ3_RS09185 YPZ3_RS09185 2007346 2007540 + hypothetical protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09185 YPZ3_RS09190 YPZ3_1550 YPZ3_RS09190 2007550 2007921 + hypothetical protein gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09190 YPZ3_RS09195 YPZ3_1551 YPZ3_RS09195 2008140 2009531 - D-arabinitol 4-dehydrogenase gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09195 YPZ3_RS09200 YPZ3_1552 YPZ3_RS09200 2009741 2010697 + DNA-binding transcriptional regulator gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09200 YPZ3_RS09205 YPZ3_1553 YPZ3_RS09205 2010818 2011423 - FMN-dependent NADH-azoreductase FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09205 YPZ3_RS09210 YPZ3_1554 YPZ3_RS09210 2011891 2015733 + ATP-dependent RNA helicase HrpA involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09210 YPZ3_RS09215 YPZ3_RS09215 YPZ3_RS09215 2016072 2016401 + hypothetical protein gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09215 YPZ3_RS09220 YPZ3_1555 YPZ3_RS09220 2016398 2016721 + DNA-binding protein gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09220 YPZ3_RS09225 YPZ3_1556 YPZ3_RS09225 2016777 2017613 - peptidase gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09225 YPZ3_RS09230 YPZ3_RS09230 YPZ3_RS09230 2017947 2018243 - acid-shock protein gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09230 YPZ3_RS09235 YPZ3_RS09235 YPZ3_RS09235 2018240 2018452 - hypothetical protein gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09235 YPZ3_RS09240 YPZ3_1557 YPZ3_RS09240 2018847 2019401 + cytochrome B561 gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09240 YPZ3_RS09245 YPZ3_1558 YPZ3_RS09245 2019427 2020005 + hypothetical protein gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09245 YPZ3_RS09250 YPZ3_RS09250 YPZ3_RS09250 2020570 2020728 + invertase gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09250 YPZ3_RS09255 YPZ3_1559 YPZ3_RS09255 2020832 2021188 - DNA gyrase gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09255 YPZ3_RS09260 YPZ3_1560 YPZ3_RS09260 2021191 2023815 - toxin TccC3 gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09260 YPZ3_RS09265 YPZ3_RS09265 YPZ3_RS09265 2024625 2024795 + transposase gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09265 YPZ3_RS09270 YPZ3_1561 YPZ3_RS09270 2024785 2025243 + transposase gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09270 YPZ3_RS09275 YPZ3_1562 YPZ3_RS09275 2025365 2026864 - peptidase M32 gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09275 YPZ3_RS09280 YPZ3_1563 YPZ3_RS09280 2026958 2028214 - two-component system sensor histidine kinase gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09280 YPZ3_RS09285 YPZ3_1564 YPZ3_RS09285 2028263 2029009 - two-component system response regulator response regulator in two-component regulatory system with RstB gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09285 YPZ3_RS09290 YPZ3_1565 YPZ3_RS09290 2029306 2029722 + hypothetical protein gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09290 YPZ3_RS09295 YPZ3_1566 YPZ3_RS09295 2029746 2031137 - arginine:ornithine antiporter gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09295 YPZ3_RS09300 YPZ3_1567 YPZ3_RS09300 2031407 2032360 - hypothetical protein gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09300 YPZ3_RS09305 YPZ3_RS09305 YPZ3_RS09305 2032566 2032769 + hypothetical protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09305 YPZ3_RS09310 YPZ3_1568 pntA pntA 2032890 2034416 + NAD(P) transhydrogenase subunit alpha forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09310 YPZ3_RS09315 YPZ3_1569 pntB pntB 2034489 2035883 + pyridine nucleotide transhydrogenase catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09315 YPZ3_RS09320 YPZ3_1570 YPZ3_RS09320 2036158 2037114 - universal stress protein E with UspC and UspD is involved in resistance to UV irradiation gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09320 YPZ3_RS09325 YPZ3_1571 YPZ3_RS09325 2037249 2038001 - fumarate and nitrate reduction regulatory protein Global transcription factor that controls the expression of over 100 target genes in response to anoxia gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09325 YPZ3_RS09330 YPZ3_1572 YPZ3_RS09330 2038074 2038592 - methylated-DNA--protein-cysteine methyltransferase gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09330 YPZ3_RS09335 YPZ3_1573 YPZ3_RS09335 2038833 2040278 + alkaline phosphatase gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09335 YPZ3_RS09340 YPZ3_1574 YPZ3_RS09340 2040824 2041834 + membrane protein gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09340 YPZ3_RS09345 YPZ3_1575 YPZ3_RS09345 2041834 2043219 + hypothetical protein gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09345 YPZ3_RS09350 YPZ3_1576 YPZ3_RS09350 2043350 2044024 + dUMP phosphatase manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09350 YPZ3_RS09355 YPZ3_1577 YPZ3_RS09355 2044091 2044393 - acetolactate synthase gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09355 YPZ3_RS09360 YPZ3_1578 YPZ3_RS09360 2044395 2046062 - acetolactate synthase gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09360 YPZ3_RS09365 YPZ3_1579 YPZ3_RS09365 2046664 2047458 + hypothetical protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09365 YPZ3_RS09370 YPZ3_1580 YPZ3_RS09370 2047627 2050167 - virulence factor gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09370 YPZ3_RS09375 YPZ3_RS09375 YPZ3_RS09375 2050164 2053236 - virulence factor SrfB gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09375 YPZ3_RS09380 YPZ3_1583 YPZ3_RS09380 2053241 2054674 - virulence factor gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09380 YPZ3_RS09385 YPZ3_1584 YPZ3_RS09385 2054880 2056295 + AMP nucleosidase Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09385 YPZ3_RS09390 YPZ3_1585 YPZ3_RS09390 2056905 2057255 + LacI family transcriptional regulator gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09390 YPZ3_RS09395 YPZ3_1586 YPZ3_RS09395 2057399 2057869 + hypothetical protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09395 YPZ3_RS09400 YPZ3_1587 YPZ3_RS09400 2057933 2058949 + LacI family transcriptional regulator gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09400 YPZ3_RS09405 YPZ3_RS09405 YPZ3_RS09405 2059071 2059181 + hypothetical protein gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09405 YPZ3_RS09410 YPZ3_1588 YPZ3_RS09410 2059549 2060829 + voltage-gated ClC-type chloride channel ClcB gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09410 YPZ3_RS09415 YPZ3_1589 YPZ3_RS09415 2060933 2061601 - dithiobiotin synthetase DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09415 YPZ3_RS09420 YPZ3_1590 YPZ3_RS09420 2061825 2063042 - transcriptional regulator mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09420 YPZ3_RS09425 YPZ3_1591 YPZ3_RS09425 2063256 2064134 - LysR family transcriptional regulator gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09425 YPZ3_RS09430 YPZ3_RS09430 YPZ3_RS09430 2064347 2065645 + hypothetical protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09430 YPZ3_RS09435 YPZ3_1593 YPZ3_RS09435 2065850 2066785 + DNA replication terminus site-binding protein binds to DNA replication terminator sequences to prevent passage of replication forks gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09435 YPZ3_RS09440 YPZ3_1594 fumC fumC 2066865 2068262 - fumarate hydratase class II class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09440 YPZ3_RS09445 YPZ3_1595 YPZ3_RS09445 2068546 2069721 + mannose-6-phosphate isomerase catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09445 YPZ3_RS09450 YPZ3_1596 YPZ3_RS09450 2069961 2071505 + hypothetical protein gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09450 YPZ3_RS09455 YPZ3_1597 YPZ3_RS09455 2071554 2072153 - hypothetical protein gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09455 YPZ3_RS09460 YPZ3_1598 YPZ3_RS09460 2072359 2073387 - hypothetical protein gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09460 YPZ3_RS09465 YPZ3_1599 YPZ3_RS09465 2073581 2074630 - oxidoreductase gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09465 YPZ3_RS09470 YPZ3_1600 YPZ3_RS09470 2074758 2075690 - transcriptional regulator positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09470 YPZ3_RS09475 YPZ3_1601 araH araH 2075911 2076960 - arabinose ABC transporter permease Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09475 YPZ3_RS09480 YPZ3_1602 araG araG 2076978 2078549 - arabinose import ATP-binding protein AraG Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09480 YPZ3_RS09485 YPZ3_1603 YPZ3_RS09485 2078647 2079630 - arabinose ABC transporter substrate-binding protein with AraGH is involved in the transport of arabinose into the cell gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09485 YPZ3_RS09490 YPZ3_1604 YPZ3_RS09490 2080038 2081741 + ribulokinase catalyzes the phosphorylation of ribulose to ribulose 5-phosphate gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09490 YPZ3_RS09495 YPZ3_1605 YPZ3_RS09495 2081825 2083327 + L-arabinose isomerase gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09495 YPZ3_RS09500 YPZ3_1606 YPZ3_RS09500 2083517 2085655 - peptidase C39 gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09500 YPZ3_RS09505 YPZ3_1607 YPZ3_RS09505 2085657 2086025 - hemolysin D gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09505 YPZ3_RS09510 YPZ3_1608 YPZ3_RS09510 2086025 2087026 - peptide ABC transporter gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09510 YPZ3_RS09515 YPZ3_RS09515 YPZ3_RS09515 2087051 2087272 - ABC transporter permease gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09515 YPZ3_RS09520 YPZ3_1609 YPZ3_RS09520 2087325 2089109 - peptidase C39 gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09520 YPZ3_RS09525 YPZ3_1610 YPZ3_RS09525 2089584 2090027 + membrane protein gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09525 YPZ3_RS09530 YPZ3_1611 YPZ3_RS09530 2090155 2090736 + electron transport complex subunit A gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09530 YPZ3_RS09535 YPZ3_1612 YPZ3_RS09535 2090736 2091302 + electron transport complex subunit B part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09535 YPZ3_RS09540 YPZ3_1613 YPZ3_RS09540 2091352 2093214 + electron transport complex subunit C gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09540 YPZ3_RS09545 YPZ3_1614 YPZ3_RS09545 2093319 2094212 - AraC family transcriptional regulator gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09545 YPZ3_RS09550 YPZ3_1615 YPZ3_RS09550 2094701 2095795 + electron transporter RnfG gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09550 YPZ3_RS09555 YPZ3_1616 YPZ3_RS09555 2095805 2096434 + electron transport complex subunit G part of membrane-bound complex hought to be involved in electron transport to nitrogen gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09555 YPZ3_RS09560 YPZ3_1617 YPZ3_RS09560 2096431 2097132 + electron transport complex subunit E gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09560 YPZ3_RS09565 YPZ3_1618 YPZ3_RS09565 2097129 2097770 + endonuclease III DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09565 YPZ3_RS09570 YPZ3_1619 YPZ3_RS09570 2097953 2098951 - hypothetical protein gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09570 YPZ3_RS09575 YPZ3_1620 YPZ3_RS09575 2098989 2100299 - MFS transporter gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09575 YPZ3_RS09580 YPZ3_1621 YPZ3_RS09580 2100958 2102892 + exoribonuclease 2 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09580 YPZ3_RS09585 YPZ3_1622 YPZ3_RS09585 2103242 2105308 + carbon starvation protein A gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09585 YPZ3_RS09590 YPZ3_1623 YPZ3_RS09590 2105301 2105606 + hypothetical protein gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09590 YPZ3_RS09595 YPZ3_1624 YPZ3_RS09595 2105723 2106388 - fructose-6-phosphate aldolase similar to transaldolase from Escherichia coli%3B many organisms have multiple copies gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09595 YPZ3_RS09600 YPZ3_RS09600 YPZ3_RS09600 2106722 2106970 + hypothetical protein gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09600 YPZ3_RS09605 YPZ3_1625 araD araD 2106999 2107694 - L-ribulose-5-phosphate 4-epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09605 YPZ3_RS09610 YPZ3_RS09610 YPZ3_RS09610 2108174 2108389 + lipoprotein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09610 YPZ3_RS09615 YPZ3_1626 YPZ3_RS09615 2108627 2108953 - translation initiation factor Sui1 involved in start site selection during the initiation of translation gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09615 YPZ3_RS09620 YPZ3_1627 YPZ3_RS09620 2108953 2109690 - orotidine 5'-phosphate decarboxylase gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09620 YPZ3_RS09625 YPZ3_RS09625 YPZ3_RS09625 2110160 2110459 + hypothetical protein gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09625 YPZ3_RS09630 YPZ3_1628 YPZ3_RS09630 2110581 2111750 - hypothetical protein gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09630 YPZ3_RS09635 YPZ3_1629 YPZ3_RS09635 2111757 2112068 - membrane protein gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09635 YPZ3_RS09640 YPZ3_1630 YPZ3_RS09640 2112237 2112998 - phosphatidylglycerophosphatase B gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09640 YPZ3_RS09645 YPZ3_1631 ribA ribA 2113504 2114094 + GTP cyclohydrolase-2 catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09645 YPZ3_RS09650 YPZ3_1632 YPZ3_RS09650 2114258 2116930 - aconitate hydratase Catalyzes the conversion of citrate to isocitrate gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09650 YPZ3_RS09655 YPZ3_1633 YPZ3_RS09655 2117294 2118151 - hypothetical protein gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09655 YPZ3_RS09660 YPZ3_1634 cysB cysB 2118487 2119461 - CysB family transcriptional regulator LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09660 YPZ3_RS09665 YPZ3_1635 YPZ3_RS09665 2119858 2122473 - DNA topoisomerase I catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09665 YPZ3_RS09670 YPZ3_RS09670 YPZ3_RS09670 2122500 2122799 - hypothetical protein gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09670 YPZ3_RS09675 YPZ3_RS09675 YPZ3_RS09675 2122892 2123143 + hypothetical protein gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09675 YPZ3_RS09680 YPZ3_1636 YPZ3_RS09680 2123262 2124308 - peptidase multicopy suppressor of htrA(degP) gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09680 YPZ3_RS09685 YPZ3_1637 YPZ3_RS09685 2124480 2125241 + oxoacyl-ACP reductase gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09685 YPZ3_RS09690 YPZ3_1638 YPZ3_RS09690 2125258 2125848 + cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09690 YPZ3_RS09695 YPZ3_1639 YPZ3_RS09695 2125971 2127005 - 23S rRNA pseudouridylate synthase B gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09695 YPZ3_RS09700 YPZ3_1640 YPZ3_RS09700 2127352 2127972 - hypothetical protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09700 YPZ3_RS09705 YPZ3_1641 YPZ3_RS09705 2127989 2128924 - S-adenosylmethionine tRNA ribosyltransferase gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09705 YPZ3_RS09710 YPZ3_RS09710 YPZ3_RS09710 2129005 2129133 + hypothetical protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09710 YPZ3_RS09715 YPZ3_RS09715 YPZ3_RS09715 2129162 2129224 + trp operon leader peptide gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09715 YPZ3_RS09720 YPZ3_1642 YPZ3_RS09720 2129343 2130905 + anthranilate synthase subunit I with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09720 YPZ3_RS09725 YPZ3_1643 YPZ3_RS09725 2130905 2131483 + Anthranilate synthase component 2 gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09725 YPZ3_RS09730 YPZ3_1644 YPZ3_RS09730 2131498 2132496 + anthranilate phosphoribosyltransferase gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09730 YPZ3_RS09735 YPZ3_1645 YPZ3_RS09735 2132500 2133927 + tryptophan biosynthesis protein TrpCF monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09735 YPZ3_RS09740 YPZ3_1646 YPZ3_RS09740 2134084 2135274 + tryptophan synthase subunit beta catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09740 YPZ3_RS09745 YPZ3_1647 YPZ3_RS09745 2135274 2136080 + tryptophan synthase subunit alpha gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09745 YPZ3_RS09750 YPZ3_1648 YPZ3_RS09750 2136423 2136737 + lipoprotein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09750 YPZ3_RS09755 YPZ3_1649 YPZ3_RS09755 2136884 2137531 - outer membrane protein W receptor for colicin S4 gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09755 YPZ3_RS09760 YPZ3_RS09760 YPZ3_RS09760 2137628 2137843 - hypothetical protein gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09760 YPZ3_RS09765 YPZ3_1650 YPZ3_RS09765 2138005 2138775 + membrane protein gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09765 YPZ3_RS09770 YPZ3_1651 YPZ3_RS09770 2138896 2139516 - sulfate permease gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09770 YPZ3_RS09775 YPZ3_1652 YPZ3_RS09775 2139548 2140630 - sulfate transporter gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09775 YPZ3_RS09780 YPZ3_1653 YPZ3_RS09780 2140861 2141403 + intracellular septation protein A Involved in cell division%3B probably involved in intracellular septation gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09780 YPZ3_RS09785 YPZ3_1654 YPZ3_RS09785 2141483 2141932 + acyl-CoA thioester hydrolase gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09785 YPZ3_RS09790 YPZ3_1655 YPZ3_RS09790 2142080 2143288 + transposase gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09790 YPZ3_RS09795 YPZ3_1656 YPZ3_RS09795 2143324 2144082 - transporter TonB gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09795 YPZ3_RS09800 YPZ3_RS09800 YPZ3_RS09800 2144383 2144679 + hypothetical protein unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09800 YPZ3_RS09805 YPZ3_RS09805 YPZ3_RS09805 2144902 2145147 + hypothetical protein gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09805 YPZ3_RS09810 YPZ3_RS09810 YPZ3_RS09810 2145263 2145526 - hypothetical protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09810 YPZ3_RS09815 YPZ3_1657 YPZ3_RS09815 2145747 2146286 - attachment invasion locus protein gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09815 YPZ3_RS09820 YPZ3_1658 cls cls 2147333 2148793 + cardiolipin synthase catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09820 YPZ3_RS09825 YPZ3_1659 YPZ3_RS09825 2148958 2149281 + dsDNA-mimic protein highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09825 YPZ3_RS09830 YPZ3_RS09830 YPZ3_RS09830 2149580 2149795 - hypothetical protein gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09830 YPZ3_RS09835 YPZ3_RS09835 YPZ3_RS09835 2150092 2150307 + hypothetical protein gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09835 YPZ3_RS09840 YPZ3_1660 YPZ3_RS09840 2150356 2151357 - peptide ABC transporter ATP-binding protein with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09840 YPZ3_RS09845 YPZ3_1661 oppD oppD 2151354 2152355 - peptide ABC transporter ATP-binding protein gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09845 YPZ3_RS09850 YPZ3_1662 YPZ3_RS09850 2152367 2153275 - peptide ABC transporter permease with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09850 YPZ3_RS09855 YPZ3_1663 oppB oppB 2153291 2154211 - peptide ABC transporter permease gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09855 YPZ3_RS09860 YPZ3_1664 YPZ3_RS09860 2154298 2155935 - peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09860 YPZ3_RS09865 YPZ3_1665 YPZ3_RS09865 2156773 2157417 - membrane protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09865 YPZ3_RS09870 YPZ3_1666 YPZ3_RS09870 2158224 2160899 + acetaldehyde dehydrogenase gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09870 YPZ3_RS09875 YPZ3_1667 YPZ3_RS09875 2161439 2162461 + transposase gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09875 YPZ3_RS09880 YPZ3_1668 YPZ3_RS09880 2162461 2163240 + transposase gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09880 YPZ3_RS09885 YPZ3_1669 YPZ3_RS09885 2163609 2164199 - thymidine kinase catalyzes the formation of thymidine 5'-phosphate from thymidine gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09885 YPZ3_RS09890 YPZ3_1670 YPZ3_RS09890 2164949 2165347 + DNA-binding protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09890 YPZ3_RS09895 YPZ3_1671 YPZ3_RS09895 2165782 2167128 - UDP-glucose 6-dehydrogenase gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09895 YPZ3_RS09900 YPZ3_1672 YPZ3_RS09900 2167435 2168451 - transcriptional regulator gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09900 YPZ3_RS09905 YPZ3_1673 YPZ3_RS09905 2169785 2170249 + hypothetical protein gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09905 YPZ3_RS09910 YPZ3_1674 YPZ3_RS09910 2170333 2171202 + formyltetrahydrofolate deformylase gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09910 YPZ3_RS09915 YPZ3_1675 YPZ3_RS09915 2171165 2172373 - transposase gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09915 YPZ3_RS09920 YPZ3_t22 YPZ3_RS09920 2172653 2172737 + tRNA-Tyr tRNA gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09920 YPZ3_RS09925 YPZ3_1676 YPZ3_RS09925 2173245 2174105 - LysR family transcriptional regulator gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09925 YPZ3_RS09930 YPZ3_1677 YPZ3_RS09930 2174915 2175721 + exonuclease III gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09930 YPZ3_RS09935 YPZ3_1678 YPZ3_RS09935 2175819 2176205 + pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09935 YPZ3_RS09940 YPZ3_RS09940 YPZ3_RS09940 2176218 2176508 - hypothetical protein gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09940 YPZ3_RS09945 YPZ3_1679 YPZ3_RS09945 2176505 2178430 - DNA topoisomerase III decatenates replicating daughter chromosomes gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09945 YPZ3_RS09950 YPZ3_1680 YPZ3_RS09950 2178492 2179538 - selenophosphate synthase catalyzes the formation of selenophosphate from selenide and ATP gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09950 YPZ3_RS09955 YPZ3_1681 YPZ3_RS09955 2179763 2180314 - oxidoreductase gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09955 YPZ3_RS09960 YPZ3_1682 YPZ3_RS09960 2180477 2182327 + signal peptide peptidase SppA SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09960 YPZ3_RS09965 YPZ3_1683 ansA ansA 2182444 2183460 + asparaginase converts asparagine to aspartate and ammonia gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09965 YPZ3_RS09970 YPZ3_1684 YPZ3_RS09970 2183475 2184122 + nicotinamidase/pyrazinamidase gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09970 YPZ3_RS09975 YPZ3_RS09975 YPZ3_RS09975 2184256 2184528 - hypothetical protein gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09975 YPZ3_RS09980 YPZ3_1686 YPZ3_RS09980 2184599 2185012 - peptide methionine sulfoxide reductase MsrB gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09980 YPZ3_RS09985 YPZ3_1687 YPZ3_RS09985 2185360 2186355 + glyceraldehyde-3-phosphate dehydrogenase gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09985 YPZ3_RS09990 YPZ3_1688 YPZ3_RS09990 2186669 2187544 + glucose-6-phosphate 1-epimerase gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09990 YPZ3_RS09995 YPZ3_1689 YPZ3_RS09995 2187617 2188387 - MltA-interacting protein MipA scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS09995 YPZ3_RS10000 YPZ3_1690 YPZ3_RS10000 2188810 2190744 + PrkA family serine protein kinase gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10000 YPZ3_RS10005 YPZ3_1691 YPZ3_RS10005 2190894 2192168 + hypothetical protein gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10005 YPZ3_RS10010 YPZ3_1692 YPZ3_RS10010 2192276 2193394 + membrane protein gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10010 YPZ3_RS10015 YPZ3_1693 YPZ3_RS10015 2193429 2194334 - LysR family transcriptional regulator gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10015 YPZ3_RS10020 YPZ3_1694 YPZ3_RS10020 2194532 2195401 + quercetin 2%2C3-dioxygenase gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10020 YPZ3_RS10025 YPZ3_1695 YPZ3_RS10025 2195666 2196868 + Bcr/CflA family drug resistance efflux transporter gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10025 YPZ3_RS10030 YPZ3_1696 YPZ3_RS10030 2196884 2198188 - D-amino acid dehydrogenase catalyzes the oxidative deamination of D-amino acids gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10030 YPZ3_RS10035 YPZ3_1697 YPZ3_RS10035 2198653 2200188 + SpoVR family protein gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10035 YPZ3_RS10040 YPZ3_1698 YPZ3_RS10040 2200406 2201125 - fatty acid metabolism regulator protein Multifunctional regulator of fatty acid metabolism gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10040 YPZ3_RS10045 YPZ3_1699 YPZ3_RS10045 2201369 2202943 + Na+/H+ antiporter NhaB gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10045 YPZ3_RS10050 YPZ3_1700 YPZ3_RS10050 2203179 2203709 + disulfide bond formation protein B gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10050 YPZ3_RS10055 YPZ3_1701 YPZ3_RS10055 2204126 2204482 - hypothetical protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10055 YPZ3_RS10060 YPZ3_1702 YPZ3_RS10060 2205574 2206314 + hypothetical protein gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10060 YPZ3_RS10065 YPZ3_1703 YPZ3_RS10065 2206331 2207530 + aminotransferase catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10065 YPZ3_RS10070 YPZ3_1704 YPZ3_RS10070 2207534 2208706 + MFS transporter gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10070 YPZ3_RS10075 YPZ3_1705 YPZ3_RS10075 2209011 2210219 + transposase gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10075 YPZ3_RS10080 YPZ3_RS10080 YPZ3_RS10080 2210288 2210443 - hypothetical protein gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10080 YPZ3_RS10085 YPZ3_1706 YPZ3_RS10085 2210440 2210859 - tail assembly protein gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10085 YPZ3_RS10090 YPZ3_1707 YPZ3_RS10090 2210870 2211787 - hypothetical protein gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10090 YPZ3_RS10095 YPZ3_1708 YPZ3_RS10095 2211804 2212802 - hypothetical protein gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10095 YPZ3_RS10100 YPZ3_1709 YPZ3_RS10100 2212802 2216005 - host specificity protein gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10100 YPZ3_RS10105 YPZ3_RS10105 YPZ3_RS10105 2216181 2216402 + hypothetical protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10105 YPZ3_RS10110 YPZ3_RS10110 YPZ3_RS10110 2216371 2216535 - hypothetical protein gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10110 YPZ3_RS10115 YPZ3_1710 YPZ3_RS10115 2216577 2217197 - hypothetical protein gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10115 YPZ3_RS10120 YPZ3_RS10120 YPZ3_RS10120 2217253 2217468 - hypothetical protein gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10120 YPZ3_RS10125 YPZ3_RS10125 YPZ3_RS10125 2217611 2218162 - membrane protein gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10125 YPZ3_RS10130 YPZ3_1711 YPZ3_RS10130 2218261 2219268 - hypothetical protein gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10130 YPZ3_RS10135 YPZ3_RS10135 YPZ3_RS10135 2219342 2219509 - hypothetical protein gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10135 YPZ3_RS10140 YPZ3_RS10140 YPZ3_RS10140 2219633 2220064 + Rha family transcriptional regulator gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10140 YPZ3_RS10145 YPZ3_1712 YPZ3_RS10145 2220143 2220775 - hypothetical protein gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10145 YPZ3_RS10150 YPZ3_1713 YPZ3_RS10150 2221036 2221746 - peptidase P60 gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10150 YPZ3_RS10155 YPZ3_1714 YPZ3_RS10155 2221749 2222501 - hypothetical protein gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10155 YPZ3_RS10160 YPZ3_1715 YPZ3_RS10160 2222622 2223080 - transposase gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10160 YPZ3_RS10165 YPZ3_RS10165 YPZ3_RS10165 2223070 2223225 - invasin gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10165 YPZ3_RS10170 YPZ3_1716 YPZ3_RS10170 2223385 2223726 - phage tail protein gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10170 YPZ3_RS10175 YPZ3_1717 YPZ3_RS10175 2223729 2227232 - tail protein gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10175 YPZ3_RS10180 YPZ3_RS10180 YPZ3_RS10180 2227233 2227454 - hypothetical protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10180 YPZ3_RS10185 YPZ3_1718 YPZ3_RS10185 2227541 2227852 - hypothetical protein gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10185 YPZ3_RS10190 YPZ3_1719 YPZ3_RS10190 2227865 2228785 - phage tail protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10190 YPZ3_RS10195 YPZ3_1720 YPZ3_RS10195 2228851 2229258 - hypothetical protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10195 YPZ3_RS10200 YPZ3_1721 YPZ3_RS10200 2229255 2229839 - hypothetical protein gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10200 YPZ3_RS10205 YPZ3_1722 YPZ3_RS10205 2229841 2230191 - hypothetical protein gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10205 YPZ3_RS10210 YPZ3_RS10210 YPZ3_RS10210 2230193 2230447 - hypothetical protein gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10210 YPZ3_RS10215 YPZ3_1723 YPZ3_RS10215 2230444 2230926 - hypothetical protein gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10215 YPZ3_RS10220 YPZ3_1724 YPZ3_RS10220 2230974 2232179 - hypothetical protein gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10220 YPZ3_RS10225 YPZ3_1725 YPZ3_RS10225 2232193 2232966 - hypothetical protein gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10225 YPZ3_RS10230 YPZ3_1726 YPZ3_RS10230 2233088 2234200 - hypothetical protein gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10230 YPZ3_RS10235 YPZ3_1727 YPZ3_RS10235 2234201 2234842 - hypothetical protein gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10235 YPZ3_RS10240 YPZ3_1728 YPZ3_RS10240 2234861 2235589 - hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10240 YPZ3_RS10245 YPZ3_1729 YPZ3_RS10245 2235589 2236563 - hypothetical protein gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10245 YPZ3_RS10250 YPZ3_1730 YPZ3_RS10250 2236568 2237776 - transposase gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10250 YPZ3_RS10255 YPZ3_RS10255 YPZ3_RS10255 2237824 2238402 - terminase large subunit gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10255 YPZ3_RS10260 YPZ3_1732 YPZ3_RS10260 2238412 2238861 - hypothetical protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10260 YPZ3_RS10265 YPZ3_1733 YPZ3_RS10265 2238892 2239527 - hypothetical protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10265 YPZ3_RS10270 YPZ3_1734 YPZ3_RS10270 2239984 2240697 - hypothetical protein gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10270 YPZ3_RS10275 YPZ3_1735 YPZ3_RS10275 2241243 2241701 - endopeptidase gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10275 YPZ3_RS10280 YPZ3_1736 YPZ3_RS10280 2241686 2242198 - glycoside hydrolase gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10280 YPZ3_RS10285 YPZ3_RS10285 YPZ3_RS10285 2242229 2242426 - hypothetical protein gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10285 YPZ3_RS10290 YPZ3_RS10290 YPZ3_RS10290 2242672 2242947 + hypothetical protein gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10290 YPZ3_RS10295 YPZ3_RS10295 YPZ3_RS10295 2242944 2243153 - hypothetical protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10295 YPZ3_RS10300 YPZ3_RS10300 YPZ3_RS10300 2243316 2243492 + hypothetical protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10300 YPZ3_RS10305 YPZ3_1737 YPZ3_RS10305 2243577 2244140 - hypothetical protein gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10305 YPZ3_RS10310 YPZ3_RS10310 YPZ3_RS10310 2244189 2244407 - hypothetical protein gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10310 YPZ3_RS10315 YPZ3_RS10315 YPZ3_RS10315 2244411 2244800 - antitermination protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10315 YPZ3_RS10320 YPZ3_1738 YPZ3_RS10320 2244801 2245406 - protein ninG gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10320 YPZ3_RS10325 YPZ3_1739 YPZ3_RS10325 2245480 2245926 - hypothetical protein gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10325 YPZ3_RS10330 YPZ3_1740 YPZ3_RS10330 2245953 2246651 + DNA methyltransferase gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10330 YPZ3_RS10335 YPZ3_RS10335 YPZ3_RS10335 2246951 2247211 + DNA-binding protein gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10335 YPZ3_RS10340 YPZ3_1741 YPZ3_RS10340 2247379 2248158 - transposase gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10340 YPZ3_RS10345 YPZ3_1742 YPZ3_RS10345 2248158 2249180 - transposase gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10345 YPZ3_RS10350 YPZ3_1743 YPZ3_RS10350 2249250 2250488 + integrase gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10350 YPZ3_RS10355 YPZ3_1744 YPZ3_RS10355 2250515 2250961 - hypothetical protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10355 YPZ3_RS10360 YPZ3_1745 YPZ3_RS10360 2251064 2251720 - hypothetical protein gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10360 YPZ3_RS10365 YPZ3_1746 YPZ3_RS10365 2251791 2252876 - lipoprotein gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10365 YPZ3_RS10370 YPZ3_RS10370 YPZ3_RS10370 2253017 2253289 - hypothetical protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10370 YPZ3_RS10375 YPZ3_1747 minC minC 2254010 2254696 + septum site-determining protein MinC blocks the formation of polar Z-ring septums gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10375 YPZ3_RS10380 YPZ3_1748 YPZ3_RS10380 2254721 2255533 + cell division inhibitor MinD ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10380 YPZ3_RS10385 YPZ3_RS10385 minE minE 2255537 2255806 + cell division topological specificity factor works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10385 YPZ3_RS10390 YPZ3_1749 YPZ3_RS10390 2256043 2257164 - ribonuclease D gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10390 YPZ3_RS10395 YPZ3_1750 YPZ3_RS10395 2257324 2259012 - long-chain-fatty-acid--CoA ligase Activates fatty acids by binding to coenzyme A gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10395 YPZ3_RS10400 YPZ3_1751 YPZ3_RS10400 2259655 2260260 - membrane protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10400 YPZ3_RS10405 YPZ3_1752 YPZ3_RS10405 2260397 2261095 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10405 YPZ3_RS10410 YPZ3_1753 YPZ3_RS10410 2261167 2263071 - ATP-dependent helicase gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10410 YPZ3_RS10415 YPZ3_1754 YPZ3_RS10415 2263202 2263546 + hypothetical protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10415 YPZ3_RS10420 YPZ3_1755 YPZ3_RS10420 2263678 2264007 - spermidine export protein MdtI with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10420 YPZ3_RS10425 YPZ3_1756 YPZ3_RS10425 2263994 2264437 - spermidine export protein MdtJ gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10425 YPZ3_RS10430 YPZ3_1757 YPZ3_RS10430 2265152 2265793 - ketohydroxyglutarate aldolase catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10430 YPZ3_RS10435 YPZ3_1758 YPZ3_RS10435 2266035 2267519 - glucose-6-phosphate 1-dehydrogenase catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10435 YPZ3_RS10440 YPZ3_1759 YPZ3_RS10440 2267872 2268741 + transcriptional regulator Represses the expression of the zwf%2C eda%2C glp and gap gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10440 YPZ3_RS10445 YPZ3_1760 YPZ3_RS10445 2269071 2270513 + pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10445 YPZ3_RS10450 YPZ3_1761 YPZ3_RS10450 2270858 2271820 - lipid A biosynthesis acyltransferase gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10450 YPZ3_RS10455 YPZ3_1762 YPZ3_RS10455 2272087 2273403 - peptidase gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10455 YPZ3_RS10460 YPZ3_1763 znuA znuA 2273424 2274380 - zinc uptake system protein ZnuA involved in transport of zinc(II) with ZnuA and C gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10460 YPZ3_RS10465 YPZ3_1764 znuC znuC 2274456 2275214 + Mn2+/Zn2+ABC transporter ATP-binding protein involved in transport of zinc(II) with ZnuA and C gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10465 YPZ3_RS10470 YPZ3_1765 znuB znuB 2275211 2275996 + zinc transporter involved in transport of zinc(II) with ZnuA and C gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10470 YPZ3_RS10475 YPZ3_1766 ruvB ruvB 2276051 2277055 - Holliday junction DNA helicase RuvB promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10475 YPZ3_RS10480 YPZ3_1767 ruvA ruvA 2277217 2277831 - Holliday junction DNA helicase RuvA plays an essential role in ATP-dependent branch migration of the Holliday junction gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10480 YPZ3_RS10485 YPZ3_1768 ruvC ruvC 2278114 2278635 - crossover junction endodeoxyribonuclease RuvC endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10485 YPZ3_RS10490 YPZ3_1769 YPZ3_RS10490 2278844 2279587 - transcriptional regulator gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10490 YPZ3_RS10495 YPZ3_1770 nudB nudB 2279645 2280088 - dATP pyrophosphohydrolase catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10495 YPZ3_RS10500 YPZ3_1771 YPZ3_RS10500 2280088 2281884 - aspartate--tRNA ligase gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10500 YPZ3_RS10505 YPZ3_1772 YPZ3_RS10505 2282942 2283757 + hypothetical protein gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10505 YPZ3_RS10510 YPZ3_1773 YPZ3_RS10510 2283937 2284332 + membrane protein gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10510 YPZ3_RS10515 YPZ3_1774 YPZ3_RS10515 2284523 2285326 + tRNA (cmo5U34)-methyltransferase gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10515 YPZ3_RS10520 YPZ3_1775 YPZ3_RS10520 2285323 2286294 + tRNA (mo5U34)-methyltransferase catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10520 YPZ3_RS10525 YPZ3_1776 YPZ3_RS10525 2286487 2287251 - copper homeostasis protein CutC gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10525 YPZ3_RS10530 YPZ3_1777 YPZ3_RS10530 2287483 2288058 - hypothetical protein gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10530 YPZ3_RS10535 YPZ3_1778 YPZ3_RS10535 2288685 2290415 + arginine--tRNA ligase gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10535 YPZ3_RS10540 YPZ3_1779 YPZ3_RS10540 2290646 2295121 - hemolysin gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10540 YPZ3_RS10545 YPZ3_1780 YPZ3_RS10545 2295406 2297067 - hemolysin activation protein gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10545 YPZ3_RS10550 YPZ3_1781 YPZ3_RS10550 2297547 2299082 - membrane protein gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10550 YPZ3_RS10555 YPZ3_RS10555 YPZ3_RS10555 2299349 2300260 - virulence factor MviM gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10555 YPZ3_RS10560 YPZ3_1783 YPZ3_RS10560 2300967 2301551 - alanine acetyltransferase gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10560 YPZ3_RS10565 YPZ3_1784 YPZ3_RS10565 2301845 2303050 + multidrug resistance protein MdtH Confers resistance to norfloxacin and enoxacin gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10565 YPZ3_RS10570 YPZ3_1785 YPZ3_RS10570 2303445 2304008 + lipoprotein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10570 YPZ3_RS10575 YPZ3_1786 YPZ3_RS10575 2304462 2305022 - molecular chaperone gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10575 YPZ3_RS10580 YPZ3_1787 YPZ3_RS10580 2305059 2305796 - phosphatase gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10580 YPZ3_RS10585 YPZ3_t23 YPZ3_RS10585 2306085 2306174 + tRNA-Ser tRNA gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10585 YPZ3_RS10590 YPZ3_1788 YPZ3_RS10590 2306431 2307543 - transcriptional regulator gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10590 YPZ3_RS10595 YPZ3_1789 YPZ3_RS10595 2307557 2308387 - glycerophosphoryl diester phosphodiesterase gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10595 YPZ3_RS10600 YPZ3_1790 YPZ3_RS10600 2308602 2308928 + ABC transporter ATP-binding protein gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10600 YPZ3_RS10605 YPZ3_1791 YPZ3_RS10605 2309016 2309474 - transposase gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10605 YPZ3_RS10610 YPZ3_1792 YPZ3_RS10610 2309642 2310379 + ABC transporter gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10610 YPZ3_RS10615 YPZ3_1793 YPZ3_RS10615 2310376 2311242 + spermidine/putrescine ABC transporter permease gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10615 YPZ3_RS10620 YPZ3_1794 YPZ3_RS10620 2311239 2312075 + spermidine/putrescine ABC transporter permease gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10620 YPZ3_RS10625 YPZ3_1795 YPZ3_RS10625 2312095 2313177 + LysR family transcriptional regulator gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10625 YPZ3_RS10630 YPZ3_1796 YPZ3_RS10630 2313478 2314353 + glycerophosphodiester phosphodiesterase gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10630 YPZ3_RS10635 YPZ3_t24 YPZ3_RS10635 2314495 2314584 + tRNA-Ser tRNA gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10635 YPZ3_RS10640 YPZ3_RS10640 YPZ3_RS10640 2314885 2315181 + hypothetical protein gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10640 YPZ3_RS10645 YPZ3_1797 YPZ3_RS10645 2315420 2317117 + transporter role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10645 YPZ3_RS10650 YPZ3_1798 YPZ3_RS10650 2317471 2318325 - 2-dehydro-3-deoxyphosphooctonate aldolase catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10650 YPZ3_RS10655 YPZ3_1799 YPZ3_RS10655 2318421 2319230 - transcriptional regulator gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10655 YPZ3_RS10660 YPZ3_1800 YPZ3_RS10660 2319227 2319628 - siroheme synthase gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10660 YPZ3_RS10665 YPZ3_1801 YPZ3_RS10665 2319692 2320522 - release factor glutamine methyltransferase HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10665 YPZ3_RS10670 YPZ3_1802 prfA prfA 2320522 2321604 - peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10670 YPZ3_RS10675 YPZ3_1803 hemA hemA 2321637 2322899 - glutamyl-tRNA reductase catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10675 YPZ3_RS10680 YPZ3_1804 YPZ3_RS10680 2323205 2323828 + outer membrane lipoprotein LolB gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10680 YPZ3_RS10685 YPZ3_1805 YPZ3_RS10685 2323830 2324729 + 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10685 YPZ3_RS10690 YPZ3_RS10690 YPZ3_RS10690 2324910 2325020 + hypothetical protein gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10690 YPZ3_RS10695 YPZ3_1806 YPZ3_RS10695 2325070 2326017 + ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10695 YPZ3_RS10700 YPZ3_RS10700 YPZ3_RS10700 2326115 2326228 + hypothetical protein gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10700 YPZ3_RS10705 YPZ3_RS10705 YPZ3_RS10705 2326219 2326491 - membrane protein YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10705 YPZ3_RS10710 YPZ3_1807 YPZ3_RS10710 2326853 2327443 + peptidyl-tRNA hydrolase gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10710 YPZ3_RS10715 YPZ3_1808 ychF ychF 2327607 2328698 + GTP-binding protein EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10715 YPZ3_RS10720 YPZ3_RS10720 YPZ3_RS10720 2329121 2329309 + transposase gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10720 YPZ3_RS10725 YPZ3_RS10725 YPZ3_RS10725 2329327 2329836 + integrase gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10725 YPZ3_RS10730 YPZ3_1810 YPZ3_RS10730 2329884 2330282 - rhodanese gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10730 YPZ3_RS10735 YPZ3_1811 YPZ3_RS10735 2330290 2331120 - esterase gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10735 YPZ3_RS10740 YPZ3_1812 YPZ3_RS10740 2331117 2331773 - hypothetical protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10740 YPZ3_RS10745 YPZ3_1813 YPZ3_RS10745 2332404 2333246 + hypothetical protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10745 YPZ3_RS10750 YPZ3_1814 YPZ3_RS10750 2333455 2334150 - membrane protein gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10750 YPZ3_RS10755 YPZ3_1815 YPZ3_RS10755 2334165 2334830 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10755 YPZ3_RS10760 YPZ3_1816 YPZ3_RS10760 2335021 2336112 - hypothetical protein gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10760 YPZ3_RS10765 YPZ3_1817 YPZ3_RS10765 2336377 2337069 + two-component system response regulator response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10765 YPZ3_RS10770 YPZ3_1818 YPZ3_RS10770 2337081 2338466 + two-component system sensor histidine kinase gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10770 YPZ3_RS10775 YPZ3_1819 YPZ3_RS10775 2338743 2339165 + cytochrome D ubiquinol oxidase subunit II gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10775 YPZ3_RS10780 YPZ3_1820 YPZ3_RS10780 2339220 2339690 + cupin gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10780 YPZ3_RS10785 YPZ3_1821 YPZ3_RS10785 2339903 2340976 + alpha/beta hydrolase gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10785 YPZ3_RS10790 YPZ3_1822 YPZ3_RS10790 2341767 2342672 + hypothetical protein gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10790 YPZ3_RS10795 YPZ3_1823 YPZ3_RS10795 2342678 2343610 + hypothetical protein gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10795 YPZ3_RS10800 YPZ3_1824 YPZ3_RS10800 2343597 2344547 + hypothetical protein gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10800 YPZ3_RS10805 YPZ3_1825 YPZ3_RS10805 2344888 2345568 + dehydrogenase gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10805 YPZ3_RS10810 YPZ3_1826 YPZ3_RS10810 2345673 2346332 + methyltransferase gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10810 YPZ3_RS10815 YPZ3_1827 YPZ3_RS10815 2346467 2347105 - hypothetical protein gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10815 YPZ3_RS10820 YPZ3_RS10820 YPZ3_RS10820 2347161 2347349 + hypothetical protein gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10820 YPZ3_RS10825 YPZ3_1828 YPZ3_RS10825 2347352 2349463 - membrane protein gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10825 YPZ3_RS10830 YPZ3_1829 YPZ3_RS10830 2350041 2352203 + hypothetical protein gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10830 YPZ3_RS10835 YPZ3_1830 YPZ3_RS10835 2352323 2353531 - transposase gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10835 YPZ3_RS10840 YPZ3_1831 YPZ3_RS10840 2353650 2355308 + hypothetical protein gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10840 YPZ3_RS10845 YPZ3_1832 YPZ3_RS10845 2355478 2355942 + hypothetical protein gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10845 YPZ3_RS10850 YPZ3_1833 YPZ3_RS10850 2356103 2357290 - glycosyl transferase gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10850 YPZ3_RS10855 YPZ3_1834 YPZ3_RS10855 2357287 2357871 - hypothetical protein gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10855 YPZ3_RS10860 YPZ3_1835 YPZ3_RS10860 2357868 2359022 - glycosyl transferase gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10860 YPZ3_RS10865 YPZ3_1836 YPZ3_RS10865 2359022 2359984 - dehydrogenase gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10865 YPZ3_RS10870 YPZ3_1837 YPZ3_RS10870 2360118 2361404 - coenzyme F390 synthetase gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10870 YPZ3_RS10875 YPZ3_1838 YPZ3_RS10875 2361401 2362207 - MBL fold hydrolase gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10875 YPZ3_RS10880 YPZ3_1839 YPZ3_RS10880 2362200 2363216 - dehydrogenase gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10880 YPZ3_RS10885 YPZ3_RS10885 YPZ3_RS10885 2363230 2363760 - 3-oxoacyl-ACP synthase gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10885 YPZ3_RS10890 YPZ3_1841 YPZ3_RS10890 2363729 2364238 - thiolase gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10890 YPZ3_RS10895 YPZ3_1842 YPZ3_RS10895 2365247 2366851 + chorismate-binding enzyme domain protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10895 YPZ3_RS10900 YPZ3_1843 YPZ3_RS10900 2367029 2367601 - cold inducible protein Ves gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10900 YPZ3_RS10905 YPZ3_1844 YPZ3_RS10905 2367601 2368971 - N-formimino-L-glutamate deiminase catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10905 YPZ3_RS10910 YPZ3_1845 YPZ3_RS10910 2369119 2369886 + histidine utilization repressor gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10910 YPZ3_RS10915 YPZ3_1846 YPZ3_RS10915 2370090 2371310 + imidazolonepropionase catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10915 YPZ3_RS10920 YPZ3_1847 YPZ3_RS10920 2371307 2372113 + N-formylglutamate deformylase gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10920 YPZ3_RS10925 YPZ3_1848 YPZ3_RS10925 2372682 2373461 - transposase gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10925 YPZ3_RS10930 YPZ3_1849 YPZ3_RS10930 2373461 2374483 - transposase gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10930 YPZ3_RS10935 YPZ3_RS10935 YPZ3_RS10935 2374540 2374767 + hypothetical protein gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10935 YPZ3_RS10940 YPZ3_RS10940 YPZ3_RS10940 2374751 2374873 - hypothetical protein gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10940 YPZ3_RS10945 YPZ3_RS10945 YPZ3_RS10945 2374961 2375146 + hypothetical protein gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10945 YPZ3_RS10950 YPZ3_RS10950 YPZ3_RS10950 2375162 2375386 + hypothetical protein gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10950 YPZ3_RS10955 YPZ3_RS10955 YPZ3_RS10955 2375396 2375548 - sugar ABC transporter ATPase gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10955 YPZ3_RS10960 YPZ3_1850 YPZ3_RS10960 2375623 2376513 - sugar ABC transporter ATP-binding protein gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10960 YPZ3_RS10965 YPZ3_1851 YPZ3_RS10965 2376538 2377365 - sugar ABC transporter permease gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10965 YPZ3_RS10970 YPZ3_1852 YPZ3_RS10970 2377358 2378218 - sugar ABC transporter permease gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10970 YPZ3_RS10975 YPZ3_1853 YPZ3_RS10975 2378285 2379553 - sugar ABC transporter substrate-binding protein gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10975 YPZ3_RS10980 YPZ3_1854 YPZ3_RS10980 2379583 2380596 - oxidoreductase gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10980 YPZ3_RS10985 YPZ3_RS10985 YPZ3_RS10985 2381004 2381294 + transcriptional regulator gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10985 YPZ3_RS10990 YPZ3_1855 YPZ3_RS10990 2381264 2382061 - GntR family transcriptional regulator gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10990 YPZ3_RS10995 YPZ3_RS10995 YPZ3_RS10995 2382248 2382352 - transposase gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS10995 YPZ3_RS11000 YPZ3_RS11000 YPZ3_RS11000 2383030 2383464 + hypothetical protein gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11000 YPZ3_RS11005 YPZ3_1857 YPZ3_RS11005 2383476 2384045 + hypothetical protein gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11005 YPZ3_RS11010 YPZ3_RS11010 YPZ3_RS11010 2384463 2385661 - transposase gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11010 YPZ3_RS11015 YPZ3_1860 YPZ3_RS11015 2385709 2386785 - hypothetical protein gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11015 YPZ3_RS11020 YPZ3_RS11020 YPZ3_RS11020 2386851 2387141 - antitoxin gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11020 YPZ3_RS11025 YPZ3_RS11025 YPZ3_RS11025 2387122 2387394 - toxin gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11025 YPZ3_RS11030 YPZ3_RS11030 YPZ3_RS11030 2387530 2387784 + phage baseplate protein gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11030 YPZ3_RS11035 YPZ3_RS11035 YPZ3_RS11035 2387781 2388080 + lysozyme gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11035 YPZ3_RS11040 YPZ3_RS11040 YPZ3_RS11040 2388097 2388384 + hypothetical protein gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11040 YPZ3_RS11045 YPZ3_RS11045 YPZ3_RS11045 2388819 2389034 + membrane protein gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11045 YPZ3_RS11050 YPZ3_1861 YPZ3_RS11050 2389031 2389336 + hypothetical protein gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11050 YPZ3_RS11055 YPZ3_RS11055 YPZ3_RS11055 2389317 2389595 + membrane protein gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11055 YPZ3_RS11060 YPZ3_RS11060 YPZ3_RS11060 2389760 2389900 + hypothetical protein gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11060 YPZ3_RS11065 YPZ3_1862 YPZ3_RS11065 2389948 2390430 + transcriptional regulator gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11065 YPZ3_RS11070 YPZ3_1863 YPZ3_RS11070 2390502 2391461 + transposase gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11070 YPZ3_RS11075 YPZ3_1864 YPZ3_RS11075 2391681 2392025 + hypothetical protein gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11075 YPZ3_RS11080 YPZ3_RS11080 YPZ3_RS11080 2392051 2392248 + hypothetical protein gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11080 YPZ3_RS11085 YPZ3_RS11085 YPZ3_RS11085 2392278 2392460 - membrane protein gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11085 YPZ3_RS11090 YPZ3_RS11090 YPZ3_RS11090 2393070 2393192 - hypothetical protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11090 YPZ3_RS11095 YPZ3_RS11095 YPZ3_RS11095 2393585 2393812 - replicative DNA helicase gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11095 YPZ3_RS11100 YPZ3_RS11100 YPZ3_RS11100 2393923 2394438 + integrase gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11100 YPZ3_RS11105 YPZ3_t25 YPZ3_RS11105 2394736 2394821 - tRNA-Leu tRNA gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11105 YPZ3_RS11110 YPZ3_t26 YPZ3_RS11110 2394832 2394905 - tRNA-Cys tRNA gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11110 YPZ3_RS11115 YPZ3_t27 YPZ3_RS11115 2394958 2395033 - tRNA-Gly tRNA gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11115 YPZ3_RS11120 YPZ3_1865 YPZ3_RS11120 2395178 2395726 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11120 YPZ3_RS11125 YPZ3_1866 uvrC uvrC 2395785 2397617 - UvrABC system protein C The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11125 YPZ3_RS11130 YPZ3_1867 sirA sirA 2397610 2398266 - transcriptional regulator in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11130 YPZ3_RS11135 YPZ3_RS11135 YPZ3_RS11135 2398929 2399153 + hypothetical protein gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11135 YPZ3_RS11140 YPZ3_1868 YPZ3_RS11140 2399281 2399622 + membrane protein gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11140 YPZ3_RS11145 YPZ3_RS11145 YPZ3_RS11145 2399650 2399904 - membrane protein gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11145 YPZ3_RS11150 YPZ3_1869 YPZ3_RS11150 2400244 2400795 - attachment invasion locus protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11150 YPZ3_RS11155 YPZ3_t28 YPZ3_RS11155 2401482 2401557 - tRNA-Lys tRNA gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11155 YPZ3_RS11160 YPZ3_1870 YPZ3_RS11160 2401910 2403334 + alanine glycine permease gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11160 YPZ3_RS11165 YPZ3_1871 YPZ3_RS11165 2403460 2404638 - N-acetylneuraminate epimerase gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11165 YPZ3_RS11170 YPZ3_1872 YPZ3_RS11170 2405032 2405631 + NAD(P)H dehydrogenase (quinone) catalyzes the transfer of electrons from NADH to ubiquinone gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11170 YPZ3_RS11175 YPZ3_1873 YPZ3_RS11175 2405717 2407021 - deferrochelatase/peroxidase EfeB gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11175 YPZ3_RS11180 YPZ3_1874 YPZ3_RS11180 2407032 2408162 - iron uptake system component EfeO with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11180 YPZ3_RS11185 YPZ3_1875 YPZ3_RS11185 2408192 2409040 - ferrous iron permease EfeU gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11185 YPZ3_RS11190 YPZ3_1876 YPZ3_RS11190 2409373 2410857 - proline:sodium symporter involved in the sodium dependent uptake of proline gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11190 YPZ3_RS11195 YPZ3_RS11195 YPZ3_RS11195 2410887 2411084 - membrane protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11195 YPZ3_RS11200 YPZ3_1877 putA putA 2411429 2415400 + bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11200 YPZ3_RS11205 YPZ3_RS11205 YPZ3_RS11205 2415906 2416199 + hypothetical protein gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11205 YPZ3_RS11210 YPZ3_1878 YPZ3_RS11210 2416233 2416571 + transcriptional regulator gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11210 YPZ3_RS11215 YPZ3_1879 YPZ3_RS11215 2416863 2417624 - amino acid ABC transporter ATP-binding protein gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11215 YPZ3_RS11220 YPZ3_1880 YPZ3_RS11220 2417627 2418289 - amino acid ABC transporter permease gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11220 YPZ3_RS11225 YPZ3_1881 YPZ3_RS11225 2418289 2419089 - cystine transporter subunit gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11225 YPZ3_RS11230 YPZ3_1882 YPZ3_RS11230 2419213 2420205 - D-cysteine desulfhydrase gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11230 YPZ3_RS11235 YPZ3_1883 YPZ3_RS11235 2420494 2421003 - flagellar biosynthesis protein FliZ gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11235 YPZ3_RS11240 YPZ3_1884 fliA fliA 2421225 2421947 - flagellar biosynthesis sigma factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11240 YPZ3_RS11245 YPZ3_1885 YPZ3_RS11245 2422294 2423403 - flagellin structural flagella protein gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11245 YPZ3_RS11250 YPZ3_1886 YPZ3_RS11250 2423700 2425100 + flagellar cap protein FliD gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11250 YPZ3_RS11255 YPZ3_1887 fliS fliS 2425111 2425509 + flagellar export chaperone FliS flagellin specific chaperone gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11255 YPZ3_RS11260 YPZ3_RS11260 YPZ3_RS11260 2425520 2425882 + flagellar protein FliT gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11260 YPZ3_RS11265 YPZ3_RS11265 YPZ3_RS11265 2425937 2426176 + membrane protein gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11265 YPZ3_RS11270 YPZ3_1888 YPZ3_RS11270 2426183 2427058 + AraC family transcriptional regulator gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11270 YPZ3_RS11275 YPZ3_1889 YPZ3_RS11275 2427412 2429325 + histidine kinase gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11275 YPZ3_RS11280 YPZ3_1890 YPZ3_RS11280 2429462 2430367 + chemotaxis protein gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11280 YPZ3_RS11285 YPZ3_1891 YPZ3_RS11285 2430528 2431139 + DNA-3-methyladenine glycosidase gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11285 YPZ3_RS11290 YPZ3_RS11290 YPZ3_RS11290 2431325 2431801 - death-on-curing family protein gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11290 YPZ3_RS11295 YPZ3_RS11295 YPZ3_RS11295 2431812 2431991 - hypothetical protein gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11295 YPZ3_RS11300 YPZ3_1892 YPZ3_RS11300 2432411 2432722 - flagellar hook-basal body complex protein FliE gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11300 YPZ3_RS11305 YPZ3_1893 YPZ3_RS11305 2433075 2434787 + flagellar M-ring protein FliF gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11305 YPZ3_RS11310 YPZ3_1894 fliG fliG 2434784 2435776 + flagellar motor switch protein FliG One of three proteins involved in switching the direction of the flagellar rotation gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11310 YPZ3_RS11315 YPZ3_1895 fliH fliH 2435769 2436485 + flagellar assembly protein H binds to and inhibits the function of flagella specific ATPase FliI gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11315 YPZ3_RS11320 YPZ3_1896 fliI fliI 2436448 2437902 + flagellum-specific ATP synthase involved in type III protein export during flagellum assembly gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11320 YPZ3_RS11325 YPZ3_1897 fliJ fliJ 2438002 2438448 + flagellar biosynthesis chaperone rod/hook and filament chaperone gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11325 YPZ3_RS11330 YPZ3_1898 YPZ3_RS11330 2438445 2439797 + flagellar hook-length control protein FliK gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11330 YPZ3_RS11335 YPZ3_1899 fliL fliL 2440064 2440534 + flagellar basal body protein FliL interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11335 YPZ3_RS11340 YPZ3_1900 fliM fliM 2440540 2441541 + flagellar motor switch protein FliM with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11340 YPZ3_RS11345 YPZ3_1901 fliN fliN 2441538 2441954 + flagellar motor switch protein FliN One of three proteins involved in switching the direction of the flagellar rotation gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11345 YPZ3_RS11350 YPZ3_1902 YPZ3_RS11350 2441954 2442490 + flagellar biosynthesis protein gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11350 YPZ3_RS11355 YPZ3_1903 fliP fliP 2442571 2443311 + flagellar biosynthesis protein FliP FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11355 YPZ3_RS11360 YPZ3_RS11360 fliQ fliQ 2443417 2443687 + flagellar biosynthesis protein FliQ with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11360 YPZ3_RS11365 YPZ3_1904 fliR fliR 2443690 2444472 + flagellar biosynthesis protein FliR FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11365 YPZ3_RS11370 YPZ3_RS11370 YPZ3_RS11370 2444679 2444861 + hypothetical protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11370 YPZ3_RS11375 YPZ3_1905 YPZ3_RS11375 2444906 2445325 + hypothetical protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11375 YPZ3_RS11380 YPZ3_1906 YPZ3_RS11380 2445583 2446542 - kinase pfkB family gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11380 YPZ3_RS11385 YPZ3_1907 YPZ3_RS11385 2446591 2447613 - sugar ABC transporter permease gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11385 YPZ3_RS11390 YPZ3_1908 YPZ3_RS11390 2447616 2449193 - sugar ABC transporter ATP-binding protein gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11390 YPZ3_RS11395 YPZ3_1909 YPZ3_RS11395 2449259 2450254 - LacI family transcriptional regulator gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11395 YPZ3_RS11400 YPZ3_1910 YPZ3_RS11400 2450297 2451376 - sugar ABC transporter permease gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11400 YPZ3_RS11405 YPZ3_1911 YPZ3_RS11405 2451506 2453572 - short-chain dehydrogenase gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11405 YPZ3_RS11410 YPZ3_1912 YPZ3_RS11410 2453790 2454791 + DNA-binding transcriptional regulator gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11410 YPZ3_RS11415 YPZ3_1913 flgL flgL 2454820 2455800 - flagellar hook-associated protein FlgL with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11415 YPZ3_RS11420 YPZ3_1914 flgK flgK 2455939 2457603 - flagellar hook protein FlgK with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11420 YPZ3_RS11425 YPZ3_1915 flgJ flgJ 2458474 2459418 - flagellar rod assembly protein FlgJ Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11425 YPZ3_RS11430 YPZ3_1916 flgI flgI 2459418 2460527 - flagellar basal body P-ring protein part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11430 YPZ3_RS11435 YPZ3_1917 YPZ3_RS11435 2460542 2461273 - flagellar basal body L-ring protein gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11435 YPZ3_RS11440 YPZ3_1918 flgG flgG 2461375 2462100 - flagellar biosynthesis protein FlgG makes up the distal portion of the flagellar basal body rod gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11440 YPZ3_RS11445 YPZ3_1919 flgF flgF 2462054 2462683 - flagellar basal body rod protein FlgF FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11445 YPZ3_RS11450 YPZ3_1920 flgE flgE 2462705 2463991 - flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11450 YPZ3_RS11455 YPZ3_1921 flgD flgD 2464193 2464870 - flagellar basal body rod modification protein acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11455 YPZ3_RS11460 YPZ3_1922 flgC flgC 2464885 2465289 - flagellar basal body rod protein FlgC with FlgF and B makes up the proximal portion of the flagellar basal body rod gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11460 YPZ3_RS11465 YPZ3_1923 YPZ3_RS11465 2465295 2465708 - flagellar biosynthesis protein FlgB gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11465 YPZ3_RS11470 YPZ3_1924 YPZ3_RS11470 2465947 2466645 + flagellar basal body P-ring biosynthesis protein FlgA gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11470 YPZ3_RS11475 YPZ3_1925 YPZ3_RS11475 2466796 2467098 + flagellar biosynthesis protein FlgM regulates the flagellar specific sigma28 transcription factor gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11475 YPZ3_RS11480 YPZ3_1926 YPZ3_RS11480 2467117 2467557 + flagellar synthesis protein FlgN export chaperone for FlgK and FlgL gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11480 YPZ3_RS11485 YPZ3_1927 YPZ3_RS11485 2467747 2469819 - hypothetical protein gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11485 YPZ3_RS11490 YPZ3_1928 YPZ3_RS11490 2469909 2470367 - transposase gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11490 YPZ3_RS11495 YPZ3_RS11495 YPZ3_RS11495 2470357 2471361 - invasin gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11495 YPZ3_RS11500 YPZ3_1929 YPZ3_RS11500 2472025 2472447 - flagellar biosynthesis protein FlhE gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11500 YPZ3_RS11505 YPZ3_1930 YPZ3_RS11505 2472447 2474525 - flagellar biosynthesis protein FlhA gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11505 YPZ3_RS11510 YPZ3_1931 flhB flhB 2474525 2475685 - flagellar biosynthesis protein FlhB membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11510 YPZ3_RS11515 YPZ3_1932 YPZ3_RS11515 2476217 2476675 + membrane protein gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11515 YPZ3_RS11520 YPZ3_1933 YPZ3_RS11520 2476669 2476995 + acyl carrier protein gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11520 YPZ3_RS11525 YPZ3_RS11525 YPZ3_RS11525 2477008 2477238 - hypothetical protein gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11525 YPZ3_RS11530 YPZ3_1934 YPZ3_RS11530 2477518 2477859 - hypothetical protein gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11530 YPZ3_RS11535 YPZ3_1935 YPZ3_RS11535 2477956 2478840 - copper resistance protein D gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11535 YPZ3_RS11540 YPZ3_1936 YPZ3_RS11540 2478843 2479229 - hypothetical protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11540 YPZ3_RS11545 YPZ3_1937 YPZ3_RS11545 2479626 2480135 - ferritin cytoplasmic iron storage protein gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11545 YPZ3_RS11550 YPZ3_RS11550 YPZ3_RS11550 2480536 2480766 + DNA polymerase III subunit theta gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11550 YPZ3_RS11555 YPZ3_1938 YPZ3_RS11555 2480826 2481776 - proline iminopeptidase gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11555 YPZ3_RS11560 YPZ3_1939 YPZ3_RS11560 2482498 2484549 - oligopeptidase B PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11560 YPZ3_RS11565 YPZ3_1940 YPZ3_RS11565 2484859 2485284 - hypothetical protein gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11565 YPZ3_RS11570 YPZ3_1941 YPZ3_RS11570 2485376 2485684 - hypothetical protein gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11570 YPZ3_RS11575 YPZ3_1942 YPZ3_RS11575 2485724 2486044 - hypothetical protein gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11575 YPZ3_RS11580 YPZ3_1943 YPZ3_RS11580 2486138 2487520 - RNA helicase exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11580 YPZ3_RS11585 YPZ3_1944 YPZ3_RS11585 2487833 2489014 + phosphoribosylglycinamide formyltransferase 2 gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11585 YPZ3_RS11590 YPZ3_RS11590 YPZ3_RS11590 2489140 2489397 - hypothetical protein gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11590 YPZ3_RS11595 YPZ3_1945 pabB pabB 2489562 2490938 + aminodeoxychorismate synthase subunit I para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11595 YPZ3_RS11600 YPZ3_1946 YPZ3_RS11600 2490935 2491534 + NUDIX hydrolase gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11600 YPZ3_RS11605 YPZ3_1947 YPZ3_RS11605 2492242 2493606 + L-serine dehydratase catalyzes the formation of pyruvate from serine gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11605 YPZ3_RS11610 YPZ3_1948 hpaC hpaC 2493886 2494383 - 4-hydroxyphenylacetate 3-monooxygenase catalyzes the reduction of MN%2C FAD and riboflavin by NADH gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11610 YPZ3_RS11615 YPZ3_1949 YPZ3_RS11615 2494404 2495966 - 4-hydroxyphenylacetate 3-monooxygenase gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11615 YPZ3_RS11620 YPZ3_1950 YPZ3_RS11620 2496034 2497401 - 4-hydroxyphenylacetate permease gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11620 YPZ3_RS11625 YPZ3_1951 YPZ3_RS11625 2497427 2498233 - alpha-dehydro-beta-deoxy-D-glucarate aldolase gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11625 YPZ3_RS11630 YPZ3_1952 YPZ3_RS11630 2498244 2499047 - 2-oxo-hept-3-ene-1%2C7-dioate hydratase gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11630 YPZ3_RS11635 YPZ3_1953 YPZ3_RS11635 2499041 2499439 - 5-carboxymethyl-2-hydroxymuconate isomerase catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11635 YPZ3_RS11640 YPZ3_1954 YPZ3_RS11640 2499464 2500321 - 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11640 YPZ3_RS11645 YPZ3_1955 YPZ3_RS11645 2500440 2501837 - betaine-aldehyde dehydrogenase catalyzes the formation of betaine from betaine aldehyde gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11645 YPZ3_RS11650 YPZ3_1956 YPZ3_RS11650 2501834 2502598 - 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11650 YPZ3_RS11655 YPZ3_1957 YPZ3_RS11655 2502595 2503227 - 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11655 YPZ3_RS11660 YPZ3_1958 YPZ3_RS11660 2503611 2504078 + homoprotocatechuate degradative operon repressor gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11660 YPZ3_RS11665 YPZ3_1959 YPZ3_RS11665 2504180 2505556 - membrane protein gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11665 YPZ3_RS11670 YPZ3_1960 YPZ3_RS11670 2506345 2507319 + PTS mannose transporter subunit IIAB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11670 YPZ3_RS11675 YPZ3_1961 YPZ3_RS11675 2507411 2508208 + PTS mannose transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11675 YPZ3_RS11680 YPZ3_1962 YPZ3_RS11680 2508224 2509102 + PTS mannose transporter subunit IID hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11680 YPZ3_RS11685 YPZ3_1963 YPZ3_RS11685 2509302 2509763 + membrane protein gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11685 YPZ3_RS11690 YPZ3_1964 YPZ3_RS11690 2510192 2510761 + membrane protein membrane protein YebN gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11690 YPZ3_RS11695 YPZ3_1965 YPZ3_RS11695 2510922 2513135 - TonB-dependent receptor gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11695 YPZ3_RS11700 YPZ3_1966 YPZ3_RS11700 2513557 2515638 + diguanylate cyclase gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11700 YPZ3_RS11705 YPZ3_RS11705 YPZ3_RS11705 2515860 2516138 + hypothetical protein gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11705 YPZ3_RS11710 YPZ3_1967 YPZ3_RS11710 2516360 2517199 - 23S rRNA methyltransferase gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11710 YPZ3_RS11715 YPZ3_1968 YPZ3_RS11715 2517594 2518349 + polyphenol oxidoreductase gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11715 YPZ3_RS11720 YPZ3_RS11720 YPZ3_RS11720 2518440 2518649 - cold-shock protein gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11720 YPZ3_RS11725 YPZ3_RS11725 YPZ3_RS11725 2518692 2518808 - hypothetical protein gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11725 YPZ3_RS11730 YPZ3_RS11730 YPZ3_RS11730 2519574 2519795 - hypothetical protein gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11730 YPZ3_RS11735 YPZ3_1969 YPZ3_RS11735 2519810 2520409 + lipid A palmitoyltransferase PagP gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11735 YPZ3_RS11740 YPZ3_1970 YPZ3_RS11740 2520714 2522087 - aromatic amino acid transporter gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11740 YPZ3_RS11745 YPZ3_RS11745 YPZ3_RS11745 2522324 2522569 - hypothetical protein gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11745 YPZ3_RS11750 YPZ3_RS11750 YPZ3_RS11750 2522678 2522977 - hypothetical protein gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11750 YPZ3_RS11755 YPZ3_RS11755 YPZ3_RS11755 2523240 2523515 - hypothetical protein gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11755 YPZ3_RS11760 YPZ3_RS11760 YPZ3_RS11760 2524098 2524331 + membrane protein gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11760 YPZ3_RS11765 YPZ3_RS11765 YPZ3_RS11765 2524422 2524661 - hypothetical protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11765 YPZ3_RS11770 YPZ3_RS11770 YPZ3_RS11770 2524873 2524986 - membrane protein gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11770 YPZ3_RS11775 YPZ3_1971 YPZ3_RS11775 2525217 2525603 + AraC family transcriptional regulator gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11775 YPZ3_RS11780 YPZ3_RS11780 YPZ3_RS11780 2525685 2525849 - membrane protein gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11780 YPZ3_RS11785 YPZ3_1972 YPZ3_RS11785 2526505 2528223 + ABC transporter ATP-binding protein gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11785 YPZ3_RS11790 YPZ3_1973 YPZ3_RS11790 2528326 2529177 + RIO1 family protein kinase gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11790 YPZ3_RS11795 YPZ3_RS11795 YPZ3_RS11795 2529414 2529698 + hypothetical protein gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11795 YPZ3_RS11800 YPZ3_1974 YPZ3_RS11800 2530088 2530900 + protein MtfA Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11800 YPZ3_RS11805 YPZ3_t29 YPZ3_RS11805 2531078 2531153 + tRNA-Asn tRNA gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11805 YPZ3_RS11810 YPZ3_RS11810 YPZ3_RS11810 2531296 2531553 - ThuR%2C regulatory protein for trehalosemaltose transport gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11810 YPZ3_RS11815 YPZ3_1975 YPZ3_RS11815 2531569 2532348 - transposase gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11815 YPZ3_RS11820 YPZ3_1976 YPZ3_RS11820 2532348 2533370 - transposase gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11820 YPZ3_RS11825 YPZ3_1977 YPZ3_RS11825 2533384 2534271 - transcriptional regulator gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11825 YPZ3_RS11830 YPZ3_1978 YPZ3_RS11830 2534746 2535954 - transposase gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11830 YPZ3_RS11835 YPZ3_1979 YPZ3_RS11835 2536002 2536352 - pectin degradation protein kdgF gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11835 YPZ3_RS11840 YPZ3_1980 YPZ3_RS11840 2536688 2537524 + 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11840 YPZ3_RS11845 YPZ3_1981 YPZ3_RS11845 2537616 2538377 + 2-deoxy-D-gluconate 3-dehydrogenase catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11845 YPZ3_RS11850 YPZ3_1982 YPZ3_RS11850 2538713 2540380 + pectate disaccharide-lyase gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11850 YPZ3_RS11855 YPZ3_1983 YPZ3_RS11855 2540421 2541311 + sugar ABC transporter permease gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11855 YPZ3_RS11860 YPZ3_1984 YPZ3_RS11860 2541304 2542224 + sugar ABC transporter permease gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11860 YPZ3_RS11865 YPZ3_1985 YPZ3_RS11865 2542238 2543365 + sugar ABC transporter ATP-binding protein gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11865 YPZ3_RS11870 YPZ3_1986 YPZ3_RS11870 2543381 2544673 + sugar ABC transporter substrate-binding protein gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11870 YPZ3_RS11875 YPZ3_1987 YPZ3_RS11875 2544971 2545681 + porin gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11875 YPZ3_RS11880 YPZ3_1988 YPZ3_RS11880 2546161 2546709 + membrane protein gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11880 YPZ3_RS11885 YPZ3_1989 YPZ3_RS11885 2546913 2548304 + L-cystine transporter tcyP gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11885 YPZ3_RS11890 YPZ3_1990 YPZ3_RS11890 2548519 2549370 - N-acetylmuramoyl-L-alanine amidase gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11890 YPZ3_RS11895 YPZ3_1991 YPZ3_RS11895 2549755 2550546 - IclR family transcriptional regulator regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11895 YPZ3_RS11900 YPZ3_1992 YPZ3_RS11900 2550733 2551899 - oligogalacturonate lyase gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11900 YPZ3_RS11905 YPZ3_1993 YPZ3_RS11905 2552226 2553593 + multidrug MFS transporter gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11905 YPZ3_RS11910 YPZ3_1994 YPZ3_RS11910 2553647 2554450 - molecular chaperone gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11910 YPZ3_RS11915 YPZ3_1995 YPZ3_RS11915 2554447 2555610 - fimbrial protein gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11915 YPZ3_RS11920 YPZ3_1996 YPZ3_RS11920 2555607 2558219 - outer membrane usher protein gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11920 YPZ3_RS11925 YPZ3_1997 YPZ3_RS11925 2558301 2558987 - fimbrial assembly protein StbE gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11925 YPZ3_RS11930 YPZ3_1998 YPZ3_RS11930 2559233 2559775 - fimbrial protein gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11930 YPZ3_RS11935 YPZ3_1999 YPZ3_RS11935 2560433 2561314 - protease HtpX metalloprotease gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11935 YPZ3_RS11940 YPZ3_2000 YPZ3_RS11940 2561788 2563860 - carboxyl-terminal processing protease Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11940 YPZ3_RS11945 YPZ3_2001 YPZ3_RS11945 2563880 2564593 - RNA chaperone ProQ affects solute and DNA transport through an unknown mechanism gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11945 YPZ3_RS11950 YPZ3_2002 YPZ3_RS11950 2564689 2565186 - diguanylate cyclase gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11950 YPZ3_RS11955 YPZ3_2003 YPZ3_RS11955 2565418 2566665 + membrane protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11955 YPZ3_RS11960 YPZ3_2004 YPZ3_RS11960 2566634 2569285 + hypothetical protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11960 YPZ3_RS11965 YPZ3_2005 YPZ3_RS11965 2569764 2570318 + spore coat protein U gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11965 YPZ3_RS11970 YPZ3_2006 YPZ3_RS11970 2570363 2570854 + spore coat protein U gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11970 YPZ3_RS11975 YPZ3_RS11975 YPZ3_RS11975 2570875 2571432 + spore coat protein U gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11975 YPZ3_RS11980 YPZ3_2007 YPZ3_RS11980 2571463 2572215 + molecular chaperone gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11980 YPZ3_RS11985 YPZ3_2008 YPZ3_RS11985 2572386 2574833 + outer membrane usher protein gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11985 YPZ3_RS11990 YPZ3_2009 YPZ3_RS11990 2575039 2576028 + spore coat protein U gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11990 YPZ3_RS11995 YPZ3_RS11995 YPZ3_RS11995 2576236 2576475 + hypothetical protein gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS11995 YPZ3_RS12000 YPZ3_2010 YPZ3_RS12000 2576585 2576974 - RNA-binding protein gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12000 YPZ3_RS12005 YPZ3_2011 YPZ3_RS12005 2577381 2578403 + transposase gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12005 YPZ3_RS12010 YPZ3_2012 YPZ3_RS12010 2578403 2579182 + transposase gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12010 YPZ3_RS12015 YPZ3_RS12015 YPZ3_RS12015 2579757 2579990 - DNA-binding protein gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12015 YPZ3_RS12020 YPZ3_2013 YPZ3_RS12020 2580145 2581401 - lipoprotein gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12020 YPZ3_RS12025 YPZ3_RS12025 YPZ3_RS12025 2581794 2582042 - hypothetical protein gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12025 YPZ3_RS12030 YPZ3_RS12030 YPZ3_RS12030 2582607 2582801 + hypothetical protein gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12030 YPZ3_RS12035 YPZ3_2014 YPZ3_RS12035 2583203 2584432 + alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12035 YPZ3_RS12040 YPZ3_2015 YPZ3_RS12040 2585051 2586004 - hypothetical protein gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12040 YPZ3_RS12045 YPZ3_2016 YPZ3_RS12045 2586104 2586538 - hypothetical protein gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12045 YPZ3_RS12050 YPZ3_2017 YPZ3_RS12050 2586525 2588618 - hypothetical protein gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12050 YPZ3_RS12055 YPZ3_2018 YPZ3_RS12055 2589092 2589856 - N-acetylmuramoyl-L-alanine amidase gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12055 YPZ3_RS12060 YPZ3_RS12060 YPZ3_RS12060 2589988 2590107 + hypothetical protein gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12060 YPZ3_RS12065 YPZ3_2019 YPZ3_RS12065 2590427 2591071 - protein phosphatase CheZ cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12065 YPZ3_RS12070 YPZ3_2020 YPZ3_RS12070 2591081 2591470 - chemotaxis protein CheY chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12070 YPZ3_RS12075 YPZ3_2021 YPZ3_RS12075 2591571 2592620 - two-component system protein-glutamate methylesterase response regulator regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12075 YPZ3_RS12080 YPZ3_2022 YPZ3_RS12080 2592620 2593492 - chemotaxis protein CheR methylates the MCP gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12080 YPZ3_RS12085 YPZ3_2023 YPZ3_RS12085 2593665 2595275 - methyl-accepting chemotaxis protein mediates taxis toward dipeptides gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12085 YPZ3_RS12090 YPZ3_2024 YPZ3_RS12090 2595459 2597132 - methyl-accepting chemotaxis protein serine sensor receptor gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12090 YPZ3_RS12095 YPZ3_2025 YPZ3_RS12095 2597373 2598074 - hypothetical protein gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12095 YPZ3_RS12100 YPZ3_2026 YPZ3_RS12100 2598143 2601019 - membrane protein gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12100 YPZ3_RS12105 YPZ3_2027 YPZ3_RS12105 2601547 2605353 - autotransporter gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12105 YPZ3_RS12110 YPZ3_2028 YPZ3_RS12110 2605828 2606493 - DNA-binding protein gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12110 YPZ3_RS12115 YPZ3_2029 YPZ3_RS12115 2606683 2607669 + xylose isomerase gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12115 YPZ3_RS12120 YPZ3_2030 YPZ3_RS12120 2607666 2608043 + endoribonuclease L-PSP gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12120 YPZ3_RS12125 YPZ3_2031 YPZ3_RS12125 2608056 2609291 + membrane protein gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12125 YPZ3_RS12130 YPZ3_2032 YPZ3_RS12130 2609583 2610080 - purine-binding chemotaxis protein gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12130 YPZ3_RS12135 YPZ3_2033 YPZ3_RS12135 2610243 2612408 - chemotaxis protein CheA gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12135 YPZ3_RS12140 YPZ3_RS12140 YPZ3_RS12140 2612761 2613708 - hypothetical protein gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12140 YPZ3_RS12145 YPZ3_2035 YPZ3_RS12145 2613705 2614592 - flagellar motor protein MotA With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12145 YPZ3_RS12150 YPZ3_2036 YPZ3_RS12150 2614797 2615378 - AraC family transcriptional regulator With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12150 YPZ3_RS12155 YPZ3_RS12155 YPZ3_RS12155 2615382 2615733 - transcriptional regulator with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12155 YPZ3_RS12160 YPZ3_2037 YPZ3_RS12160 2616921 2619620 - magnesium-translocating P-type ATPase P-type%3B involved in magnesium transport into the cytoplasm gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12160 YPZ3_RS12165 YPZ3_2038 YPZ3_RS12165 2620021 2620719 - magnesium transporter gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12165 YPZ3_RS12170 YPZ3_RS12170 YPZ3_RS12170 2621071 2621241 - hypothetical protein gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12170 YPZ3_RS12175 YPZ3_RS12175 YPZ3_RS12175 2621878 2623579 + chemotaxis protein gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12175 YPZ3_RS12180 YPZ3_RS12180 YPZ3_RS12180 2623762 2623953 - protein DsrB gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12180 YPZ3_RS12185 YPZ3_RS12185 YPZ3_RS12185 2624168 2624380 - cold-shock protein gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12185 YPZ3_RS12190 YPZ3_2041 lacZ lacZ 2624921 2628103 + beta-galactosidase forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12190 YPZ3_RS12195 YPZ3_2042 YPZ3_RS12195 2628511 2629521 + zinc-binding dehydrogenase gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12195 YPZ3_RS12200 YPZ3_2043 YPZ3_RS12200 2629804 2630337 + membrane protein gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12200 YPZ3_RS12205 YPZ3_2044 YPZ3_RS12205 2630843 2631292 + AsnC family transcriptional regulator gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12205 YPZ3_RS12210 YPZ3_2045 YPZ3_RS12210 2631384 2632283 + hypothetical protein gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12210 YPZ3_RS12215 YPZ3_RS12215 YPZ3_RS12215 2632586 2632789 + hypothetical protein gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12215 YPZ3_RS12220 YPZ3_2046 YPZ3_RS12220 2633091 2634416 - phosphoanhydride phosphorylase gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12220 YPZ3_RS12225 YPZ3_RS12225 YPZ3_RS12225 2634717 2634890 - hypothetical protein gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12225 YPZ3_RS12230 YPZ3_2047 YPZ3_RS12230 2634948 2635331 - transcriptional regulator gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12230 YPZ3_RS12235 YPZ3_2048 YPZ3_RS12235 2635491 2636348 + quinone oxidoreductase gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12235 YPZ3_RS12240 YPZ3_2049 YPZ3_RS12240 2637268 2638848 + methyl-accepting chemotaxis protein gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12240 YPZ3_RS12245 YPZ3_RS12245 YPZ3_RS12245 2638968 2639228 + hypothetical protein gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12245 YPZ3_RS12250 YPZ3_2050 YPZ3_RS12250 2639504 2640547 + sucrose operon repressor gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12250 YPZ3_RS12255 YPZ3_2051 YPZ3_RS12255 2640693 2641946 - isocitrate dehydrogenase Converts isocitrate to alpha ketoglutarate gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12255 YPZ3_RS12260 YPZ3_2052 YPZ3_RS12260 2642077 2642703 + ribosomal large subunit pseudouridine synthase E catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12260 YPZ3_RS12265 YPZ3_2053 YPZ3_RS12265 2642696 2643142 + phosphatase gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12265 YPZ3_RS12270 YPZ3_2054 mnmA mnmA 2643329 2644444 + tRNA-specific 2-thiouridylase MnmA catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12270 YPZ3_RS12275 YPZ3_2055 YPZ3_RS12275 2644502 2645128 + High frequency lysogenization protein HflD homolog HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12275 YPZ3_RS12280 YPZ3_2056 YPZ3_RS12280 2645189 2646559 + adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12280 YPZ3_RS12285 YPZ3_2057 YPZ3_RS12285 2646747 2647370 + lipoprotein gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12285 YPZ3_RS12290 YPZ3_2058 YPZ3_RS12290 2647581 2648252 + two-component system response regulator response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12290 YPZ3_RS12295 YPZ3_2059 YPZ3_RS12295 2648258 2649712 + sensor protein PhoQ gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12295 YPZ3_RS12300 YPZ3_2060 YPZ3_RS12300 2649796 2650917 + hypothetical protein gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12300 YPZ3_RS12305 YPZ3_2061 YPZ3_RS12305 2651150 2652385 - peptidase T gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12305 YPZ3_RS12310 YPZ3_2062 YPZ3_RS12310 2652715 2653551 - NAD-dependent deacetylase Modulates the activities of several enzymes which are inactive in their acetylated form gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12310 YPZ3_RS12315 YPZ3_2063 YPZ3_RS12315 2653745 2654515 - N-acetyl-D-glucosamine kinase catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12315 YPZ3_RS12320 YPZ3_2064 YPZ3_RS12320 2654534 2655781 - transporter part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12320 YPZ3_RS12325 YPZ3_2065 lolD lolD 2655781 2656485 - lipoprotein-releasing system ATP-binding protein LolD outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12325 YPZ3_RS12330 YPZ3_2066 YPZ3_RS12330 2656478 2657680 - transporter part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12330 YPZ3_RS12335 YPZ3_2067 YPZ3_RS12335 2657950 2661396 + transcription-repair coupling factor gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12335 YPZ3_RS12340 YPZ3_2068 YPZ3_RS12340 2661635 2662174 - hypothetical protein gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12340 YPZ3_RS12345 YPZ3_2069 YPZ3_RS12345 2662504 2663712 - transposase gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12345 YPZ3_RS12350 YPZ3_2070 YPZ3_RS12350 2663808 2664221 - hypothetical protein gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12350 YPZ3_RS12355 YPZ3_2071 YPZ3_RS12355 2664229 2664594 - hypothetical protein gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12355 YPZ3_RS12360 YPZ3_2072 YPZ3_RS12360 2665336 2666640 - NADH dehydrogenase gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12360 YPZ3_RS12365 YPZ3_2073 YPZ3_RS12365 2667015 2667557 - hypothetical protein gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12365 YPZ3_RS12370 YPZ3_2074 YPZ3_RS12370 2667685 2668704 - beta-hexosaminidase hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12370 YPZ3_RS12375 YPZ3_2075 YPZ3_RS12375 2668787 2669653 - thiamine kinase gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12375 YPZ3_RS12380 YPZ3_2076 YPZ3_RS12380 2669634 2670209 - penicillin-binding protein activator LpoB gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12380 YPZ3_RS12385 YPZ3_2077 YPZ3_RS12385 2670250 2670639 - lipoprotein gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12385 YPZ3_RS12390 YPZ3_2078 YPZ3_RS12390 2670674 2671027 - purine nucleoside phosphoramidase gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12390 YPZ3_RS12395 YPZ3_2079 YPZ3_RS12395 2671201 2672019 - shikimate 5-dehydrogenase gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12395 YPZ3_RS12400 YPZ3_2080 YPZ3_RS12400 2672462 2672920 - transposase gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12400 YPZ3_RS12405 YPZ3_2081 YPZ3_RS12405 2673110 2674543 - PTS glucose transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12405 YPZ3_RS12410 YPZ3_2082 YPZ3_RS12410 2674849 2675658 - DNAse gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12410 YPZ3_RS12415 YPZ3_2083 YPZ3_RS12415 2675673 2676695 - DNA polymerase III subunit delta' catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12415 YPZ3_RS12420 YPZ3_2084 YPZ3_RS12420 2676695 2677333 - thymidylate kinase gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12420 YPZ3_RS12425 YPZ3_2085 YPZ3_RS12425 2677323 2678348 - aminodeoxychorismate lyase gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12425 YPZ3_RS12430 YPZ3_2086 YPZ3_RS12430 2678637 2679443 - 4-amino-4-deoxychorismate lyase catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12430 YPZ3_RS12435 YPZ3_2087 YPZ3_RS12435 2679859 2680317 - transposase gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12435 YPZ3_RS12440 YPZ3_2088 YPZ3_RS12440 2680517 2681722 - 3-oxoacyl-ACP synthase FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12440 YPZ3_RS12445 YPZ3_RS12445 YPZ3_RS12445 2681853 2682089 - acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12445 YPZ3_RS12450 YPZ3_2089 fabG fabG 2682243 2682977 - 3-ketoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12450 YPZ3_RS12455 YPZ3_2090 YPZ3_RS12455 2682991 2683920 - malonyl CoA-ACP transacylase gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12455 YPZ3_RS12460 YPZ3_2091 YPZ3_RS12460 2683958 2684908 - 3-oxoacyl-ACP synthase III FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12460 YPZ3_RS12465 YPZ3_2092 YPZ3_RS12465 2684915 2685919 - phosphate acyltransferase gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12465 YPZ3_RS12470 YPZ3_RS12470 rpmF rpmF 2685983 2686150 - 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12470 YPZ3_RS12475 YPZ3_2093 YPZ3_RS12475 2686163 2686687 - hypothetical protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12475 YPZ3_RS12480 YPZ3_2094 YPZ3_RS12480 2686829 2687425 + septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12480 YPZ3_RS12485 YPZ3_2095 YPZ3_RS12485 2687580 2688038 - transposase gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12485 YPZ3_RS12490 YPZ3_RS12490 YPZ3_RS12490 2688028 2688183 - invasin gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12490 YPZ3_RS12495 YPZ3_2096 YPZ3_RS12495 2688258 2689220 - ribosomal large subunit pseudouridine synthase C catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12495 YPZ3_RS12500 YPZ3_2097 YPZ3_RS12500 2689804 2693460 + ribonuclease E gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12500 YPZ3_RS12505 YPZ3_2098 YPZ3_RS12505 2693556 2694764 + transposase gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12505 YPZ3_RS12510 YPZ3_RS12510 YPZ3_RS12510 2695041 2695328 - antibiotic biosynthesis monooxygenase gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12510 YPZ3_RS12515 YPZ3_2099 YPZ3_RS12515 2695563 2696609 + dihydroorotase gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12515 YPZ3_RS12520 YPZ3_RS12520 YPZ3_RS12520 2696922 2697167 + DNA damage-inducible protein I gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12520 YPZ3_RS12525 YPZ3_RS12525 YPZ3_RS12525 2697366 2697494 - hypothetical protein gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12525 YPZ3_RS12530 YPZ3_RS12530 bssS bssS 2697673 2697969 + biofilm formation regulatory protein BssS BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12530 YPZ3_RS12535 YPZ3_2100 YPZ3_RS12535 2697932 2699140 - transposase gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12535 YPZ3_RS12540 YPZ3_2101 solA solA 2699501 2700616 + N-methyl-L-tryptophan oxidase catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12540 YPZ3_RS12545 YPZ3_2102 YPZ3_RS12545 2700883 2701497 + LuxR family transcriptional regulator gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12545 YPZ3_RS12550 YPZ3_2103 tqsA tqsA 2702069 2703127 - pheromone autoinducer 2 transporter transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12550 YPZ3_RS12555 YPZ3_2104 YPZ3_RS12555 2703276 2704343 - sulfurtransferase gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12555 YPZ3_RS12560 YPZ3_RS12560 YPZ3_RS12560 2704387 2704515 - hypothetical protein gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12560 YPZ3_RS12565 YPZ3_RS12565 YPZ3_RS12565 2704702 2704866 - membrane protein gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12565 YPZ3_RS12570 YPZ3_RS12570 YPZ3_RS12570 2705196 2705357 - hypothetical protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12570 YPZ3_RS12575 YPZ3_2105 YPZ3_RS12575 2705394 2706071 - transporter gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12575 YPZ3_RS12580 YPZ3_2106 YPZ3_RS12580 2706502 2707146 + acyl-homoserine-lactone synthase gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12580 YPZ3_RS12585 YPZ3_2107 YPZ3_RS12585 2707139 2707876 - LuxR family transcriptional regulator gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12585 YPZ3_RS12590 YPZ3_2108 YPZ3_RS12590 2708363 2709289 - LysR family transcriptional regulator gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12590 YPZ3_RS12595 YPZ3_RS12595 YPZ3_RS12595 2709404 2709613 - hypothetical protein gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12595 YPZ3_RS12600 YPZ3_2109 YPZ3_RS12600 2709737 2711095 + MFS transporter gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12600 YPZ3_RS12605 YPZ3_2110 YPZ3_RS12605 2711142 2711645 + aldehyde-activating protein gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12605 YPZ3_RS12610 YPZ3_2111 YPZ3_RS12610 2711656 2712675 + oxidoreductase gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12610 YPZ3_RS12615 YPZ3_2112 YPZ3_RS12615 2712753 2713307 - CRISPR-associated protein Csy4 gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12615 YPZ3_RS12620 YPZ3_2113 YPZ3_RS12620 2713318 2714322 - CRISPR-associated protein Cas5 gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12620 YPZ3_RS12625 YPZ3_2114 YPZ3_RS12625 2714340 2715290 - CRISPR type I-F system protein Csy2 gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12625 YPZ3_RS12630 YPZ3_2115 YPZ3_RS12630 2715287 2716633 - CRISPR type I-F system protein Csy1 gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12630 YPZ3_RS12635 YPZ3_2116 YPZ3_RS12635 2717041 2720328 - CRISPR-associated protein Cas3 gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12635 YPZ3_RS12640 YPZ3_2117 YPZ3_RS12640 2720325 2721305 - subtype I-F CRISPR-associated endonuclease Cas1 gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12640 YPZ3_RS12645 YPZ3_2118 YPZ3_RS12645 2722450 2723694 + miniconductance mechanosensitive channel gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12645 YPZ3_RS12650 YPZ3_2119 YPZ3_RS12650 2724289 2725563 - hypothetical protein gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12650 YPZ3_RS12655 YPZ3_2120 YPZ3_RS12655 2725602 2726717 - hypothetical protein gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12655 YPZ3_RS12660 YPZ3_2121 YPZ3_RS12660 2726840 2727778 - hypothetical protein gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12660 YPZ3_RS12665 YPZ3_2122 YPZ3_RS12665 2727805 2728860 - glycosidase gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12665 YPZ3_RS12670 YPZ3_2123 YPZ3_RS12670 2729007 2729831 - sugar ABC transporter permease gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12670 YPZ3_RS12675 YPZ3_2124 YPZ3_RS12675 2729832 2730707 - sugar ABC transporter permease gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12675 YPZ3_RS12680 YPZ3_2125 YPZ3_RS12680 2730816 2732102 - solute-binding protein gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12680 YPZ3_RS12685 YPZ3_2126 YPZ3_RS12685 2732374 2733414 + LacI family transcriptional regulator gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12685 YPZ3_RS12690 YPZ3_2127 YPZ3_RS12690 2733431 2734819 + phosphomannomutase capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12690 YPZ3_RS12695 YPZ3_2128 YPZ3_RS12695 2734919 2735998 + sugar ABC transporter ATP-binding protein gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12695 YPZ3_RS12700 YPZ3_2129 YPZ3_RS12700 2736263 2736715 - hypothetical protein gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12700 YPZ3_RS12705 YPZ3_2130 YPZ3_RS12705 2737066 2737458 - adhesin gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12705 YPZ3_RS12710 YPZ3_RS12710 YPZ3_RS12710 2737618 2738022 - hypothetical protein gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12710 YPZ3_RS12715 YPZ3_RS12715 YPZ3_RS12715 2738164 2738331 - hypothetical protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12715 YPZ3_RS12720 YPZ3_RS12720 YPZ3_RS12720 2738534 2738731 - hypothetical protein gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12720 YPZ3_RS12725 YPZ3_2131 YPZ3_RS12725 2738741 2740774 - hemagglutinin gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12725 YPZ3_RS12730 YPZ3_RS12730 YPZ3_RS12730 2740950 2741297 - hypothetical protein gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12730 YPZ3_RS12735 YPZ3_RS12735 YPZ3_RS12735 2741438 2741689 - hypothetical protein gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12735 YPZ3_RS12740 YPZ3_2132 YPZ3_RS12740 2741934 2742443 - hypothetical protein gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12740 YPZ3_RS12745 YPZ3_2133 YPZ3_RS12745 2742445 2750040 - hemagglutinin gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12745 YPZ3_RS12750 YPZ3_2134 YPZ3_RS12750 2750196 2751884 - hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12750 YPZ3_RS12755 YPZ3_2135 YPZ3_RS12755 2752537 2753502 - dioxygenase subunit beta gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12755 YPZ3_RS12760 YPZ3_2136 YPZ3_RS12760 2753598 2754722 - dioxygenase gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12760 YPZ3_RS12765 YPZ3_2137 YPZ3_RS12765 2754839 2756485 - betaine/carnitine/choline BCCT transporter member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12765 YPZ3_RS12770 YPZ3_RS12770 YPZ3_RS12770 2756851 2757033 - gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12770 YPZ3_RS12775 YPZ3_2138 YPZ3_RS12775 2757102 2758187 - tartrate dehydrogenase gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12775 YPZ3_RS12780 YPZ3_2139 YPZ3_RS12780 2758290 2759231 + LysR family transcriptional regulator gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12780 YPZ3_RS12785 YPZ3_2140 YPZ3_RS12785 2759478 2760482 + LacI family transcriptional regulator gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12785 YPZ3_RS12790 YPZ3_2141 YPZ3_RS12790 2760615 2761607 - sugar ABC transporter permease gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12790 YPZ3_RS12795 YPZ3_2142 YPZ3_RS12795 2761604 2763094 - ribonucleotide-diphosphate reductase subunit alpha gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12795 YPZ3_RS12800 YPZ3_2143 YPZ3_RS12800 2763134 2764051 - LacI family transcriptional regulator gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12800 YPZ3_RS12805 YPZ3_2144 YPZ3_RS12805 2764226 2765293 - iditol 2-dehydrogenase gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12805 YPZ3_RS12810 YPZ3_2145 YPZ3_RS12810 2766035 2766703 - hypothetical protein gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12810 YPZ3_RS12815 YPZ3_2146 YPZ3_RS12815 2766899 2767441 - hypothetical protein gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12815 YPZ3_RS12820 YPZ3_2147 YPZ3_RS12820 2767679 2768617 - cytochrome C551 gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12820 YPZ3_RS12825 YPZ3_2148 ompX ompX 2768933 2769457 - outer membrane protein X OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12825 YPZ3_RS12830 YPZ3_2149 YPZ3_RS12830 2769862 2770749 + threonine transporter RhtB gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12830 YPZ3_RS12835 YPZ3_2150 YPZ3_RS12835 2770765 2771262 + acetyltransferase gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12835 YPZ3_RS12840 YPZ3_2151 YPZ3_RS12840 2771285 2772061 + trans-aconitate 2-methyltransferase catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12840 YPZ3_RS12845 YPZ3_2152 YPZ3_RS12845 2772318 2772821 + DNA protection during starvation protein binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12845 YPZ3_RS12850 YPZ3_2153 YPZ3_RS12850 2773141 2774268 + transporter gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12850 YPZ3_RS12855 YPZ3_2154 glnH glnH 2774838 2775581 + glutamine ABC transporter substrate-binding protein similar to periplasmic-binding component of ABC transporters gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12855 YPZ3_RS12860 YPZ3_2155 glnP glnP 2775616 2776272 + glutamine ABC transporter permease similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12860 YPZ3_RS12865 YPZ3_2156 glnQ glnQ 2776269 2776991 + glutamine ABC transporter ATP-binding protein similar to ATP-binding component of ABC transporters gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12865 YPZ3_RS12870 YPZ3_2157 YPZ3_RS12870 2777231 2778529 - methyl-accepting chemotaxis protein gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12870 YPZ3_RS12875 YPZ3_2158 YPZ3_RS12875 2778588 2779610 + transposase gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12875 YPZ3_RS12880 YPZ3_2159 YPZ3_RS12880 2779610 2780389 + transposase gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12880 YPZ3_RS12885 YPZ3_2160 YPZ3_RS12885 2780514 2781194 + two-component system sensor histidine kinase gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12885 YPZ3_RS12890 YPZ3_2161 YPZ3_RS12890 2781289 2782620 + hypothetical protein gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12890 YPZ3_RS12895 YPZ3_t30 YPZ3_RS12895 2782737 2782813 + tRNA-Pro tRNA gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12895 YPZ3_RS12900 YPZ3_2162 YPZ3_RS12900 2783126 2784517 + hemagglutinin gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12900 YPZ3_RS12905 YPZ3_2163 YPZ3_RS12905 2784719 2786389 + hemolysin secretion protein ShlB gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12905 YPZ3_RS12910 YPZ3_RS12910 YPZ3_RS12910 2786449 2786655 + hypothetical protein gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12910 YPZ3_RS12915 YPZ3_2164 YPZ3_RS12915 2787058 2788665 + peptide ABC transporter substrate-binding protein DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12915 YPZ3_RS12920 YPZ3_2165 YPZ3_RS12920 2788948 2789895 + peptide ABC transporter permease gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12920 YPZ3_RS12925 YPZ3_2166 YPZ3_RS12925 2789977 2790879 + peptide ABC transporter gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12925 YPZ3_RS12930 YPZ3_2167 dppD dppD 2790893 2791873 + peptide ABC transporter ATP-binding protein DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12930 YPZ3_RS12935 YPZ3_2168 dppF dppF 2791939 2792946 + peptide ABC transporter ATP-binding protein Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12935 YPZ3_RS12940 YPZ3_2169 YPZ3_RS12940 2793265 2794164 + endonuclease III catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12940 YPZ3_RS12945 YPZ3_2170 YPZ3_RS12945 2794511 2796493 + biofilm formation regulator HmsP HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12945 YPZ3_RS12950 YPZ3_2171 YPZ3_RS12950 2797133 2797837 + porin gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12950 YPZ3_RS12955 YPZ3_2172 YPZ3_RS12955 2798083 2799801 + pectate lyase gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12955 YPZ3_RS12960 YPZ3_2173 YPZ3_RS12960 2799926 2800405 + hypothetical protein gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12960 YPZ3_RS12965 YPZ3_2174 YPZ3_RS12965 2800860 2802149 + C4-dicarboxylate transporter involved in the transport of C4-dicarboxylates across the membrane gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12965 YPZ3_RS12970 YPZ3_2175 YPZ3_RS12970 2802514 2804013 + hypothetical protein gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12970 YPZ3_RS12975 YPZ3_2176 YPZ3_RS12975 2804177 2805121 - 2-dehydro-3-deoxygluconokinase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12975 YPZ3_RS12980 YPZ3_RS12980 YPZ3_RS12980 2805400 2805600 - tautomerase gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12980 YPZ3_RS12985 YPZ3_2177 YPZ3_RS12985 2805819 2806664 + cyclic di-GMP phosphodiesterase in Escherichia coli this protein is involved in flagellar function gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12985 YPZ3_RS12990 YPZ3_2178 YPZ3_RS12990 2806969 2809191 + hypothetical protein gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12990 YPZ3_RS12995 YPZ3_2179 YPZ3_RS12995 2809168 2809965 - CDP-diacylglycerol pyrophosphatase gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS12995 YPZ3_RS13000 YPZ3_2180 YPZ3_RS13000 2809969 2811051 - membrane protein gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13000 YPZ3_RS13005 YPZ3_2181 YPZ3_RS13005 2811729 2814941 + autotransporter gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13005 YPZ3_RS13010 YPZ3_2182 YPZ3_RS13010 2815119 2815898 + hypothetical protein gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13010 YPZ3_RS13015 YPZ3_2183 YPZ3_RS13015 2815900 2816397 + hypothetical protein gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13015 YPZ3_RS13020 YPZ3_2184 YPZ3_RS13020 2816465 2816971 + hypothetical protein gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13020 YPZ3_RS13025 YPZ3_2185 YPZ3_RS13025 2817217 2818353 - glycerate kinase gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13025 YPZ3_RS13030 YPZ3_2186 YPZ3_RS13030 2818364 2819632 - gluconate:proton symporter gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13030 YPZ3_RS13035 YPZ3_2187 YPZ3_RS13035 2819810 2820937 - hypothetical protein gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13035 YPZ3_RS13040 YPZ3_2188 YPZ3_RS13040 2821129 2822481 - glutathione reductase catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13040 YPZ3_RS13045 YPZ3_2189 YPZ3_RS13045 2822667 2823509 - hypothetical protein gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13045 YPZ3_RS13050 YPZ3_2190 YPZ3_RS13050 2823838 2825880 + oligopeptidase A gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13050 YPZ3_RS13055 YPZ3_2191 YPZ3_RS13055 2825884 2826654 + ribosomal RNA small subunit methyltransferase J predicted SAM-dependent methyltransferase gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13055 YPZ3_RS13060 YPZ3_2192 YPZ3_RS13060 2826719 2828053 - peptidase M10 gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13060 YPZ3_RS13065 YPZ3_2193 YPZ3_RS13065 2828301 2829644 - glutamate dehydrogenase converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13065 YPZ3_RS13070 YPZ3_2194 YPZ3_RS13070 2829891 2830337 - universal stress protein A involved in resistance to DNA-damaging agents gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13070 YPZ3_RS13075 YPZ3_2195 YPZ3_RS13075 2831045 2831380 + universal stress protein B ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13075 YPZ3_RS13080 YPZ3_2196 YPZ3_RS13080 2831513 2831971 - transposase gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13080 YPZ3_RS13085 YPZ3_RS13085 YPZ3_RS13085 2831961 2832131 - transposase gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13085 YPZ3_RS13090 YPZ3_2197 YPZ3_RS13090 2832237 2833733 - phosphate transporter PitA involved in the transport of inorganic phosphate gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13090 YPZ3_RS13095 YPZ3_2198 YPZ3_RS13095 2834044 2835240 + membrane protein gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13095 YPZ3_RS13100 YPZ3_2199 YPZ3_RS13100 2835376 2837931 - histidine kinase gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13100 YPZ3_RS13105 YPZ3_2200 YPZ3_RS13105 2838120 2839643 + ribose import ATP-binding protein RbsA with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13105 YPZ3_RS13110 YPZ3_2201 YPZ3_RS13110 2839636 2840628 + ribose ABC transporter permease gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13110 YPZ3_RS13115 YPZ3_2202 YPZ3_RS13115 2840659 2841603 + ribose ABC transporter substrate-binding protein gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13115 YPZ3_RS13120 YPZ3_2203 YPZ3_RS13120 2841678 2842361 + hypothetical protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13120 YPZ3_RS13125 YPZ3_2204 YPZ3_RS13125 2842387 2843247 + hypothetical protein gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13125 YPZ3_RS13130 YPZ3_2205 YPZ3_RS13130 2843257 2844264 + sugar kinase gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13130 YPZ3_RS13135 YPZ3_2206 YPZ3_RS13135 2844449 2845186 - two-component system response regulator gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13135 YPZ3_RS13140 YPZ3_RS13140 YPZ3_RS13140 2845186 2845455 - hypothetical protein gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13140 YPZ3_RS13145 YPZ3_2207 YPZ3_RS13145 2845950 2846645 + quercetin 2%2C3-dioxygenase gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13145 YPZ3_RS13150 YPZ3_2208 YPZ3_RS13150 2846774 2847769 + transcriptional regulator gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13150 YPZ3_RS13155 YPZ3_2209 YPZ3_RS13155 2847861 2849177 - idonate transporter gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13155 YPZ3_RS13160 YPZ3_2210 idnK idnK 2849394 2849897 + gluconokinase gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13160 YPZ3_RS13165 YPZ3_RS13165 YPZ3_RS13165 2850079 2850312 + type IV secretion protein Rhs gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13165 YPZ3_RS13170 YPZ3_RS13170 YPZ3_RS13170 2850503 2850643 + hypothetical protein gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13170 YPZ3_RS13175 YPZ3_2211 YPZ3_RS13175 2850698 2851087 + hypothetical protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13175 YPZ3_RS13180 YPZ3_2212 YPZ3_RS13180 2851327 2851920 - membrane protein gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13180 YPZ3_RS13185 YPZ3_2213 YPZ3_RS13185 2852278 2853381 + aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13185 YPZ3_RS13190 YPZ3_RS13190 YPZ3_RS13190 2853550 2853831 + hypothetical protein gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13190 YPZ3_RS13195 YPZ3_RS13195 YPZ3_RS13195 2854147 2854446 + hypothetical protein gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13195 YPZ3_RS13200 YPZ3_RS13200 YPZ3_RS13200 2854453 2854740 + hypothetical protein gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13200 YPZ3_RS13205 YPZ3_RS13205 YPZ3_RS13205 2854831 2855172 - hypothetical protein gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13205 YPZ3_RS13210 YPZ3_2214 YPZ3_RS13210 2856716 2865517 + invasin gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13210 YPZ3_RS13215 YPZ3_2215 YPZ3_RS13215 2865725 2867422 - sensor histidine kinase gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13215 YPZ3_RS13220 YPZ3_2216 YPZ3_RS13220 2867928 2870112 + glycogen branching protein gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13220 YPZ3_RS13225 YPZ3_2217 YPZ3_RS13225 2870114 2872102 + glycogen debranching protein catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13225 YPZ3_RS13230 YPZ3_2218 glgC glgC 2872112 2873542 + glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13230 YPZ3_RS13235 YPZ3_2219 glgA glgA 2873610 2875040 + glycogen synthase catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13235 YPZ3_RS13240 YPZ3_2220 YPZ3_RS13240 2875193 2877640 + glycogen phosphorylase gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13240 YPZ3_RS13245 YPZ3_2221 glpD glpD 2877803 2879317 - glycerol-3-phosphate dehydrogenase in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13245 YPZ3_RS13250 YPZ3_RS13250 YPZ3_RS13250 2879716 2880090 + membrane protein gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13250 YPZ3_RS13255 YPZ3_2222 YPZ3_RS13255 2880399 2880863 + membrane protein gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13255 YPZ3_RS13260 YPZ3_RS13260 YPZ3_RS13260 2881028 2881297 + hypothetical protein gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13260 YPZ3_RS13265 YPZ3_2223 YPZ3_RS13265 2881652 2882437 - integrase gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13265 YPZ3_RS13270 YPZ3_2224 YPZ3_RS13270 2882491 2882805 - transposase gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13270 YPZ3_RS13275 YPZ3_2225 YPZ3_RS13275 2882892 2883914 + transposase gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13275 YPZ3_RS13280 YPZ3_2226 YPZ3_RS13280 2883914 2884693 + transposase gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13280 YPZ3_RS13285 YPZ3_2227 YPZ3_RS13285 2885555 2886565 - ribosomal RNA large subunit methyltransferase F gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13285 YPZ3_RS13290 YPZ3_RS13290 YPZ3_RS13290 2886853 2887113 + hypothetical protein gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13290 YPZ3_RS13295 YPZ3_2228 YPZ3_RS13295 2887495 2888454 - glycosyl hydrolase gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13295 YPZ3_RS13300 YPZ3_2229 YPZ3_RS13300 2888520 2889935 - O-succinylbenzoic acid--CoA ligase gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13300 YPZ3_RS13305 YPZ3_2230 YPZ3_RS13305 2889923 2890894 - o-succinylbenzoate synthase catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13305 YPZ3_RS13310 YPZ3_2231 YPZ3_RS13310 2890894 2891751 - naphthoate synthase catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13310 YPZ3_RS13315 YPZ3_2232 YPZ3_RS13315 2891765 2892583 - 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13315 YPZ3_RS13320 YPZ3_2233 YPZ3_RS13320 2892580 2894283 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13320 YPZ3_RS13325 YPZ3_2234 YPZ3_RS13325 2894511 2895878 - menaquinone-specific isochorismate synthase gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13325 YPZ3_RS13330 YPZ3_2235 YPZ3_RS13330 2896406 2897050 - protein RhiA gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13330 YPZ3_RS13335 YPZ3_2236 YPZ3_RS13335 2897605 2897913 - membrane protein gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13335 YPZ3_RS13340 YPZ3_RS13340 YPZ3_RS13340 2898477 2898620 + membrane protein gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13340 YPZ3_RS13345 YPZ3_RS13345 YPZ3_RS13345 2898561 2898773 - hypothetical protein gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13345 YPZ3_RS13350 YPZ3_2237 YPZ3_RS13350 2898839 2900710 - phosphogluconate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13350 YPZ3_RS13355 YPZ3_2238 YPZ3_RS13355 2900720 2901235 - hypothetical protein gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13355 YPZ3_RS13360 YPZ3_2239 YPZ3_RS13360 2901265 2902581 - 2-ketogluconate transporter gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13360 YPZ3_RS13365 YPZ3_2240 YPZ3_RS13365 2903127 2904077 - dihydrofolate reductase gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13365 YPZ3_RS13370 YPZ3_RS13370 YPZ3_RS13370 2904096 2904218 - hypothetical protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13370 YPZ3_RS13375 YPZ3_2241 YPZ3_RS13375 2904543 2905535 - LacI family transcriptional regulator gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13375 YPZ3_RS13380 YPZ3_2242 YPZ3_RS13380 2906004 2907287 + lipoprotein gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13380 YPZ3_RS13385 YPZ3_2243 YPZ3_RS13385 2908046 2908810 + gluconate 5-dehydrogenase Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13385 YPZ3_RS13390 YPZ3_2244 idnK idnK 2908859 2909395 + D-gluconate kinase gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13390 YPZ3_RS13395 YPZ3_2245 YPZ3_RS13395 2909473 2909940 + hypothetical protein gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13395 YPZ3_RS13400 YPZ3_2246 YPZ3_RS13400 2910285 2911475 - hypothetical protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13400 YPZ3_RS13405 YPZ3_2247 YPZ3_RS13405 2911711 2913174 - NADH-quinone oxidoreductase subunit N Catalyzes the transfer of electrons from NADH to quinone gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13405 YPZ3_RS13410 YPZ3_2248 YPZ3_RS13410 2913181 2914713 - NADH:ubiquinone oxidoreductase subunit M gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13410 YPZ3_RS13415 YPZ3_2249 YPZ3_RS13415 2914753 2916597 - NADH:ubiquinone oxidoreductase subunit L Catalyzes the transfer of electrons from NADH to ubiquinone gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13415 YPZ3_RS13420 YPZ3_2250 YPZ3_RS13420 2916594 2916896 - NADH-quinone oxidoreductase subunit K gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13420 YPZ3_RS13425 YPZ3_2251 YPZ3_RS13425 2916893 2917438 - NADH:ubiquinone oxidoreductase subunit J Catalyzes the transfer of electrons from NADH to quinone gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13425 YPZ3_RS13430 YPZ3_2252 YPZ3_RS13430 2917451 2917993 - NADH-quinone oxidoreductase subunit I gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13430 YPZ3_RS13435 YPZ3_2253 YPZ3_RS13435 2918008 2918985 - NADH-quinone oxidoreductase subunit H gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13435 YPZ3_RS13440 YPZ3_2254 YPZ3_RS13440 2918982 2921726 - NADH-quinone oxidoreductase subunit G Catalyzes the transfer of electrons from NADH to quinone gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13440 YPZ3_RS13445 YPZ3_2255 YPZ3_RS13445 2921813 2923198 - NADH dehydrogenase subunit F part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13445 YPZ3_RS13450 YPZ3_2256 YPZ3_RS13450 2923195 2923758 - NADH dehydrogenase subunit E Catalyzes the transfer of electrons from NADH to quinone gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13450 YPZ3_RS13455 YPZ3_2257 YPZ3_RS13455 2923761 2925557 - NADH-quinone oxidoreductase subunit C/D NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13455 YPZ3_RS13460 YPZ3_2258 YPZ3_RS13460 2925698 2926375 - NADH-quinone oxidoreductase subunit B gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13460 YPZ3_RS13465 YPZ3_2259 YPZ3_RS13465 2926477 2926977 - NADH-quinone oxidoreductase subunit A gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13465 YPZ3_RS13470 YPZ3_2260 YPZ3_RS13470 2927655 2928587 - LysR family transcriptional regulator gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13470 YPZ3_RS13475 YPZ3_RS13475 YPZ3_RS13475 2929038 2929310 - hypothetical protein gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13475 YPZ3_RS13480 YPZ3_2261 YPZ3_RS13480 2929443 2930657 + aminotransferase broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13480 YPZ3_RS13485 YPZ3_2262 YPZ3_RS13485 2930808 2931401 + 5'-nucleotidase gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13485 YPZ3_RS13490 YPZ3_RS13490 YPZ3_RS13490 2931448 2931639 - hypothetical protein gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13490 YPZ3_RS13495 YPZ3_2263 YPZ3_RS13495 2931744 2933576 - citrate transporter gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13495 YPZ3_RS13500 YPZ3_2264 YPZ3_RS13500 2933868 2934524 - phosphatase gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13500 YPZ3_RS13505 YPZ3_2265 YPZ3_RS13505 2934689 2935183 - hypothetical protein gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13505 YPZ3_RS13510 YPZ3_2266 YPZ3_RS13510 2935499 2935954 - hypothetical protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13510 YPZ3_RS13515 YPZ3_RS13515 YPZ3_RS13515 2936195 2936386 + hypothetical protein gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13515 YPZ3_RS13520 YPZ3_2267 YPZ3_RS13520 2936376 2937578 + acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13520 YPZ3_RS13525 YPZ3_2268 YPZ3_RS13525 2937761 2939899 + phosphate acetyltransferase catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13525 YPZ3_RS13530 YPZ3_2269 YPZ3_RS13530 2940165 2941199 - LacI family transcriptional regulator gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13530 YPZ3_RS13535 YPZ3_2270 cmtB cmtB 2941566 2942009 + PTS ascorbate transporter subunit IIA TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13535 YPZ3_RS13540 YPZ3_RS13540 YPZ3_RS13540 2942178 2942432 + PTS ascorbate transporter subunit IIB gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13540 YPZ3_RS13545 YPZ3_2271 YPZ3_RS13545 2942454 2943662 - transposase gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13545 YPZ3_RS13550 YPZ3_2272 YPZ3_RS13550 2943696 2944574 - transglycosylase gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13550 YPZ3_RS13555 YPZ3_2273 YPZ3_RS13555 2944631 2950609 - hypothetical protein gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13555 YPZ3_RS13560 YPZ3_2274 YPZ3_RS13560 2951016 2951564 - membrane protein gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13560 YPZ3_RS13565 YPZ3_2275 YPZ3_RS13565 2952198 2953052 - (Fe-S)-cluster assembly protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13565 YPZ3_RS13570 YPZ3_2276 YPZ3_RS13570 2953358 2954884 + aldehyde dehydrogenase gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13570 YPZ3_RS13575 YPZ3_2277 YPZ3_RS13575 2954919 2956844 + 3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13575 YPZ3_RS13580 YPZ3_RS13580 YPZ3_RS13580 2957138 2958123 + inositol 2-dehydrogenase gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13580 YPZ3_RS13585 YPZ3_2280 YPZ3_RS13585 2958249 2959178 + sugar ABC transporter substrate-binding protein gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13585 YPZ3_RS13590 YPZ3_2281 YPZ3_RS13590 2959227 2960774 + asparaginase with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13590 YPZ3_RS13595 YPZ3_2282 YPZ3_RS13595 2960786 2961814 + sugar ABC transporter permease gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13595 YPZ3_RS13600 YPZ3_2283 YPZ3_RS13600 2961838 2962971 + myo-inositol 2-dehydrogenase gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13600 YPZ3_RS13605 YPZ3_2284 YPZ3_RS13605 2963096 2964973 + 5-dehydro-2-deoxygluconokinase gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13605 YPZ3_RS13610 YPZ3_2285 YPZ3_RS13610 2965126 2966046 + myo-inosose-2 dehydratase gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13610 YPZ3_RS13615 YPZ3_2286 YPZ3_RS13615 2966056 2966871 + 5-deoxy-glucuronate isomerase gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13615 YPZ3_RS13620 YPZ3_RS13620 YPZ3_RS13620 2967030 2967233 + membrane protein gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13620 YPZ3_RS13625 YPZ3_2288 YPZ3_RS13625 2967441 2969231 + metal ABC transporter permease gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13625 YPZ3_RS13630 YPZ3_RS13630 YPZ3_RS13630 2969247 2969534 - antibiotic biosynthesis monooxygenase gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13630 YPZ3_RS13635 YPZ3_RS13635 YPZ3_RS13635 2969977 2970171 + glycogen synthase gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13635 YPZ3_RS13640 YPZ3_RS13640 YPZ3_RS13640 2970189 2970371 - hypothetical protein gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13640 YPZ3_RS13645 YPZ3_2289 YPZ3_RS13645 2970553 2971518 - membrane protein gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13645 YPZ3_RS13650 YPZ3_2290 YPZ3_RS13650 2971968 2972558 + LuxR family transcriptional regulator gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13650 YPZ3_RS13655 YPZ3_2291 YPZ3_RS13655 2972878 2973249 - cold-shock protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13655 YPZ3_RS13660 YPZ3_RS13660 YPZ3_RS13660 2973635 2973844 + cold-shock protein gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13660 YPZ3_RS13665 YPZ3_2292 YPZ3_RS13665 2974267 2974650 - camphor resistance protein CrcB camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13665 YPZ3_RS13670 YPZ3_RS13670 YPZ3_RS13670 2975010 2975162 + hypothetical protein gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13670 YPZ3_RS13675 YPZ3_RS13675 YPZ3_RS13675 2975217 2975474 + sec-independent protein translocase tatE gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13675 YPZ3_RS13680 YPZ3_2293 YPZ3_RS13680 2975655 2976620 - lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13680 YPZ3_RS13685 YPZ3_2294 YPZ3_RS13685 2976813 2977514 - octanoyltransferase lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13685 YPZ3_RS13690 YPZ3_RS13690 YPZ3_RS13690 2977726 2977989 - hypothetical protein gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13690 YPZ3_RS13695 YPZ3_2295 YPZ3_RS13695 2978187 2979389 - D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13695 YPZ3_RS13700 YPZ3_2296 YPZ3_RS13700 2979792 2980875 - hypothetical protein septal ring protein%2C suppressor of prc%2C minor lipoprotein gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13700 YPZ3_RS13705 YPZ3_2297 YPZ3_RS13705 2980885 2981997 - cell wall shape-determining protein gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13705 YPZ3_RS13710 YPZ3_2298 YPZ3_RS13710 2982182 2984077 - penicillin-binding protein 2 gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13710 YPZ3_RS13715 YPZ3_2299 YPZ3_RS13715 2984159 2984629 - ribosomal RNA large subunit methyltransferase H gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13715 YPZ3_RS13720 YPZ3_2300 YPZ3_RS13720 2984633 2984950 - ribosome silencing factor RsfS gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13720 YPZ3_RS13725 YPZ3_2301 YPZ3_RS13725 2985174 2985836 - nicotinate-nucleotide adenylyltransferase gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13725 YPZ3_RS13730 YPZ3_2302 holA holA 2985826 2986860 - DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13730 YPZ3_RS13735 YPZ3_2303 YPZ3_RS13735 2986857 2987480 - hypothetical protein rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13735 YPZ3_RS13740 YPZ3_2304 leuS leuS 2987495 2990077 - leucine--tRNA ligase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13740 YPZ3_RS13745 YPZ3_2305 YPZ3_RS13745 2990338 2990820 + hypothetical protein gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13745 YPZ3_RS13750 YPZ3_2306 artP artP 2990954 2991679 - arginine ABC transporter ATP-binding protein With ArtMQJI transports arginine across the inner membrane gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13750 YPZ3_RS13755 YPZ3_2307 YPZ3_RS13755 2991679 2992353 - glutamate/aspartate transporter permease GltK gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13755 YPZ3_RS13760 YPZ3_2308 YPZ3_RS13760 2992353 2993093 - glutamate/aspartate ABC transporter permease GltJ with GltIKL is involved in the transport of glutamate and aspartate gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13760 YPZ3_RS13765 YPZ3_2309 YPZ3_RS13765 2993267 2994184 - amino acid transporter gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13765 YPZ3_RS13770 YPZ3_2310 lnt lnt 2994949 2996496 - apolipoprotein N-acyltransferase Transfers the fatty acyl group on membrane lipoproteins gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13770 YPZ3_RS13775 YPZ3_2311 YPZ3_RS13775 2996504 2997382 - cobalt transporter involved in the transport of magnesium and cobalt ions gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13775 YPZ3_RS13780 YPZ3_2312 YPZ3_RS13780 2997500 2997973 - endoribonuclease YbeY gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13780 YPZ3_RS13785 YPZ3_2313 YPZ3_RS13785 2997970 2999025 - nucleoside triphosphate hydrolase gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13785 YPZ3_RS13790 YPZ3_2314 YPZ3_RS13790 2999370 3000794 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13790 YPZ3_RS13795 YPZ3_2315 ubiF ubiF 3001036 3002217 + 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13795 YPZ3_RS13800 YPZ3_t31 YPZ3_RS13800 3002611 3002685 - tRNA-Gln tRNA gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13800 YPZ3_RS13805 YPZ3_t32 YPZ3_RS13805 3002691 3002767 - tRNA-Met tRNA gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13805 YPZ3_RS13810 YPZ3_t33 YPZ3_RS13810 3002800 3002874 - tRNA-Gln tRNA gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13810 YPZ3_RS13815 YPZ3_t34 YPZ3_RS13815 3002904 3002988 - tRNA-Leu tRNA gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13815 YPZ3_RS13820 YPZ3_t35 YPZ3_RS13820 3002996 3003072 - tRNA-Met tRNA gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13820 YPZ3_RS13825 YPZ3_RS13825 YPZ3_RS13825 3003344 3003481 + hypothetical protein gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13825 YPZ3_RS13830 YPZ3_2316 asnB asnB 3003530 3005194 - asparagine synthetase B functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13830 YPZ3_RS13835 YPZ3_2317 YPZ3_RS13835 3005549 3006301 - UMP phosphatase gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13835 YPZ3_RS13840 YPZ3_2318 YPZ3_RS13840 3006374 3007600 - transcriptional regulator regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13840 YPZ3_RS13845 YPZ3_2319 nagA nagA 3007617 3008762 - N-acetylglucosamine-6-phosphate deacetylase catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13845 YPZ3_RS13850 YPZ3_2320 nagB nagB 3008782 3009582 - glucosamine-6-phosphate deaminase catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13850 YPZ3_RS13855 YPZ3_2321 YPZ3_RS13855 3009982 3012016 + PTS N-acetyl glucosamine transporter subunit IIABC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13855 YPZ3_RS13860 YPZ3_2322 YPZ3_RS13860 3012281 3012739 + transposase gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13860 YPZ3_RS13865 YPZ3_2323 YPZ3_RS13865 3012941 3014608 + glutamine--tRNA ligase catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13865 YPZ3_RS13870 YPZ3_2324 chiP chiP 3015314 3016735 + porin outer membrane porin involved in the transport of chitooligosaccharides gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13870 YPZ3_RS13875 YPZ3_RS13875 YPZ3_RS13875 3017063 3019727 + beta-N-acetylhexosaminidase gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13875 YPZ3_RS13880 YPZ3_2327 fur fur 3020168 3020614 - ferric uptake regulation protein negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13880 YPZ3_RS13885 YPZ3_2328 YPZ3_RS13885 3020981 3021508 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13885 YPZ3_RS13890 YPZ3_RS13890 YPZ3_RS13890 3021925 3022212 - LexA regulated protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13890 YPZ3_RS13895 YPZ3_RS13895 YPZ3_RS13895 3022267 3022392 + hypothetical protein gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13895 YPZ3_RS13900 YPZ3_2329 YPZ3_RS13900 3022544 3023311 - acyl-CoA esterase gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13900 YPZ3_RS13905 YPZ3_RS13905 YPZ3_RS13905 3024022 3024273 + hypothetical protein gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13905 YPZ3_RS13910 YPZ3_RS13910 YPZ3_RS13910 3024436 3024621 - hypothetical protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13910 YPZ3_RS13915 YPZ3_RS13915 YPZ3_RS13915 3024704 3024967 - transposase gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13915 YPZ3_RS13920 YPZ3_2330 YPZ3_RS13920 3025037 3025501 - hypothetical protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13920 YPZ3_RS13925 YPZ3_2331 YPZ3_RS13925 3025514 3026293 - transposase gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13925 YPZ3_RS13930 YPZ3_2332 YPZ3_RS13930 3026293 3027315 - transposase gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13930 YPZ3_RS13935 YPZ3_2333 YPZ3_RS13935 3027402 3028139 + allantoinase gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13935 YPZ3_RS13940 YPZ3_2334 proX proX 3028369 3029373 - glycine/betaine ABC transporter substrate-binding protein with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13940 YPZ3_RS13945 YPZ3_2335 YPZ3_RS13945 3029421 3030587 - glycine/betaine ABC transporter permease with ProVX is involved in the high-affinity uptake of glycine betaine gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13945 YPZ3_RS13950 YPZ3_2336 YPZ3_RS13950 3030580 3031779 - glycine/betaine ABC transporter ATP-binding protein with ProWX is involved in the high-affinity uptake of glycine betaine gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13950 YPZ3_RS13955 YPZ3_2337 YPZ3_RS13955 3032455 3033426 - ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13955 YPZ3_RS13960 YPZ3_2338 YPZ3_RS13960 3033533 3035683 - ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13960 YPZ3_RS13965 YPZ3_2339 nrdI nrdI 3035665 3036069 - protein NrdI in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13965 YPZ3_RS13970 YPZ3_RS13970 YPZ3_RS13970 3036083 3036319 - glutaredoxin gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13970 YPZ3_RS13975 YPZ3_2340 YPZ3_RS13975 3036840 3037205 + acid shock protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13975 YPZ3_RS13980 YPZ3_2341 YPZ3_RS13980 3037683 3038018 + hypothetical protein gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13980 YPZ3_RS13985 YPZ3_2342 YPZ3_RS13985 3038116 3038565 - membrane protein gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13985 YPZ3_RS13990 YPZ3_2343 YPZ3_RS13990 3038730 3039068 - hypothetical protein gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13990 YPZ3_RS13995 YPZ3_RS13995 YPZ3_RS13995 3039576 3039788 + cold-shock protein CspB gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS13995 YPZ3_RS14000 YPZ3_2344 YPZ3_RS14000 3040616 3042193 + solute-binding protein gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14000 YPZ3_RS14005 YPZ3_2345 YPZ3_RS14005 3042178 3043161 + peptide ABC transporter permease gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14005 YPZ3_RS14010 YPZ3_2346 YPZ3_RS14010 3043158 3043964 + peptide ABC transporter permease gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14010 YPZ3_RS14015 YPZ3_2347 YPZ3_RS14015 3043964 3044770 + peptide ABC transporter ATP-binding protein gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14015 YPZ3_RS14020 YPZ3_2348 YPZ3_RS14020 3044763 3045428 + nickel ABC transporter ATP-binding protein gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14020 YPZ3_RS14025 YPZ3_2349 YPZ3_RS14025 3046627 3046929 + urease subunit gamma gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14025 YPZ3_RS14030 YPZ3_2350 ureB ureB 3046982 3047416 + urease subunit beta ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta) gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14030 YPZ3_RS14035 YPZ3_2351 ureC ureC 3047506 3049224 + urease subunit alpha ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14035 YPZ3_RS14040 YPZ3_2352 ureE ureE 3049520 3050215 + urease accessory protein UreE involved in the assembly of the urease metallocenter%3B possible nickel donor gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14040 YPZ3_RS14045 YPZ3_2353 YPZ3_RS14045 3050237 3050923 + urease accessory protein UreF gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14045 YPZ3_RS14050 YPZ3_2354 YPZ3_RS14050 3051050 3051712 + urease accessory protein UreG gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14050 YPZ3_RS14055 YPZ3_2355 YPZ3_RS14055 3051709 3052542 + urease accessory protein UreD gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14055 YPZ3_RS14060 YPZ3_2356 YPZ3_RS14060 3052867 3053859 + urea transporter gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14060 YPZ3_RS14065 YPZ3_2357 YPZ3_RS14065 3054008 3055066 + nickel transporter gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14065 YPZ3_RS14070 YPZ3_2358 YPZ3_RS14070 3055235 3055564 - acid-resistance protein gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14070 YPZ3_RS14075 YPZ3_RS14075 YPZ3_RS14075 3055563 3055793 + hypothetical protein gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14075 YPZ3_RS14080 YPZ3_2359 YPZ3_RS14080 3056182 3057357 + voltage-gated potassium channel gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14080 YPZ3_RS14085 YPZ3_2360 ccrB ccrB 3057455 3057859 - camphor resistance protein CrcB may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14085 YPZ3_RS14090 YPZ3_2361 YPZ3_RS14090 3057875 3058255 - chromosome condensation protein CrcB gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14090 YPZ3_RS14095 YPZ3_RS14095 YPZ3_RS14095 3058344 3058523 - hypothetical protein gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14095 YPZ3_RS14100 YPZ3_2362 YPZ3_RS14100 3059296 3059613 + PTS N'-diacetylchitobiose transporter subunit IIB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14100 YPZ3_RS14105 YPZ3_2363 YPZ3_RS14105 3059624 3060985 + PTS N'-diacetylchitobiose transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14105 YPZ3_RS14110 YPZ3_2364 YPZ3_RS14110 3061152 3061499 + PTS N'-diacetylchitobiose transporter subunit IIA catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14110 YPZ3_RS14115 YPZ3_2365 YPZ3_RS14115 3061548 3062378 + transcriptional regulator represses the celABCDF-ydjC operon involved in carbon uptake gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14115 YPZ3_RS14120 YPZ3_2366 YPZ3_RS14120 3062430 3063191 + chitooligosaccharide deacetylase gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14120 YPZ3_RS14125 YPZ3_RS14125 YPZ3_RS14125 3063198 3063374 - membrane protein gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14125 YPZ3_RS14130 YPZ3_RS14130 YPZ3_RS14130 3063486 3063854 - hypothetical protein gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14130 YPZ3_RS14135 YPZ3_2367 YPZ3_RS14135 3064349 3064876 + N-carbamyl-L-amino acid amidohydrolase negative modulator of the initiation of chromosome replication gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14135 YPZ3_RS14140 YPZ3_2368 YPZ3_RS14140 3064949 3066592 + phosphoglucomutase catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14140 YPZ3_RS14145 YPZ3_RS14145 YPZ3_RS14145 3066810 3066923 + hypothetical protein gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14145 YPZ3_RS14150 YPZ3_RS14150 YPZ3_RS14150 3066966 3067208 + hypothetical protein gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14150 YPZ3_RS14155 YPZ3_2369 YPZ3_RS14155 3067336 3067764 - membrane protein gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14155 YPZ3_RS14160 YPZ3_2370 YPZ3_RS14160 3067859 3068545 - two-component system response regulator response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14160 YPZ3_RS14165 YPZ3_2371 YPZ3_RS14165 3068781 3071507 - two-component system sensor histidine kinase KdpD sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14165 YPZ3_RS14170 YPZ3_2372 YPZ3_RS14170 3071517 3072167 - potassium-transporting ATPase subunit C One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14170 YPZ3_RS14175 YPZ3_2373 YPZ3_RS14175 3072331 3074397 - potassium-transporting ATPase B chain One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14175 YPZ3_RS14180 YPZ3_2374 YPZ3_RS14180 3074491 3076179 - potassium-transporting ATPase A chain catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14180 YPZ3_RS14185 YPZ3_RS14185 kdpF kdpF 3076180 3076269 - potassium transporter TrkA one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14185 YPZ3_RS14190 YPZ3_RS14190 YPZ3_RS14190 3076266 3076508 - hypothetical protein gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14190 YPZ3_RS14195 YPZ3_RS14195 YPZ3_RS14195 3076674 3076880 + membrane protein gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14195 YPZ3_RS14200 YPZ3_2375 YPZ3_RS14200 3077219 3077701 + hypothetical protein gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14200 YPZ3_RS14205 YPZ3_2376 YPZ3_RS14205 3077831 3079294 + deoxyribodipyrimidine photolyase UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14205 YPZ3_RS14210 YPZ3_2377 YPZ3_RS14210 3079285 3080322 + 3'%2C5'-cyclic-nucleotide phosphodiesterase gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14210 YPZ3_RS14215 YPZ3_2378 YPZ3_RS14215 3080465 3081208 + Nif3-like dinuclear metal center hexameric protein gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14215 YPZ3_RS14220 YPZ3_RS14220 YPZ3_RS14220 3081827 3082483 + hypothetical protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14220 YPZ3_RS14225 YPZ3_2380 YPZ3_RS14225 3082477 3083265 + hypothetical protein gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14225 YPZ3_RS14230 YPZ3_2381 YPZ3_RS14230 3083425 3084162 + LamB/YcsF family protein gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14230 YPZ3_RS14235 YPZ3_2382 YPZ3_RS14235 3084247 3084978 + membrane protein gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14235 YPZ3_RS14240 YPZ3_2383 YPZ3_RS14240 3084975 3085994 + membrane protein gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14240 YPZ3_RS14245 YPZ3_2384 YPZ3_RS14245 3086004 3086651 + pyrrolidone-carboxylate peptidase gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14245 YPZ3_RS14250 YPZ3_2385 YPZ3_RS14250 3086742 3087428 - uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14250 YPZ3_RS14255 YPZ3_2386 YPZ3_RS14255 3087781 3088164 + autonomous glycyl radical cofactor GrcA stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14255 YPZ3_RS14260 YPZ3_2387 YPZ3_RS14260 3088343 3089305 + phospholipase A gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14260 YPZ3_RS14265 YPZ3_RS14265 YPZ3_RS14265 3089298 3089396 + hypothetical protein gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14265 YPZ3_RS14270 YPZ3_2388 YPZ3_RS14270 3089383 3090039 + hypothetical protein gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14270 YPZ3_RS14275 YPZ3_2389 YPZ3_RS14275 3090170 3091495 - ATP-dependent RNA helicase SrmB facilitates an early step in the assembly of the 50S subunit of the ribosome gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14275 YPZ3_RS14280 YPZ3_2390 YPZ3_RS14280 3091747 3092493 + tRNA1(Val) (adenine(37)-N6)-methyltransferase gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14280 YPZ3_RS14285 YPZ3_2391 YPZ3_RS14285 3092776 3094413 - L-aspartate oxidase catalyzes the formation of oxaloacetate from L-aspartate gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14285 YPZ3_RS14290 YPZ3_2392 YPZ3_RS14290 3094601 3095176 + RNA polymerase sigma factor AlgU Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14290 YPZ3_RS14295 YPZ3_2393 YPZ3_RS14295 3095202 3095858 + anti-RNA polymerase sigma factor SigE gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14295 YPZ3_RS14300 YPZ3_2394 rseB rseB 3095858 3096814 + anti-sigma E factor periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14300 YPZ3_RS14305 YPZ3_2395 YPZ3_RS14305 3096811 3097266 + SoxR reducing system protein RseC gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14305 YPZ3_RS14310 YPZ3_2396 YPZ3_RS14310 3097287 3098141 - membrane protein gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14310 YPZ3_RS14315 YPZ3_2397 YPZ3_RS14315 3098641 3100440 + elongation factor 4 gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14315 YPZ3_RS14320 YPZ3_2398 YPZ3_RS14320 3100450 3101448 + signal peptidase I catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14320 YPZ3_RS14325 YPZ3_2399 rnc rnc 3101800 3102480 + ribonuclease 3 cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14325 YPZ3_RS14330 YPZ3_2400 YPZ3_RS14330 3102477 3103388 + GTPase Era gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14330 YPZ3_RS14335 YPZ3_2401 recO recO 3103398 3104123 + DNA repair protein RecO involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14335 YPZ3_RS14340 YPZ3_2402 YPZ3_RS14340 3104250 3105272 + transposase gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14340 YPZ3_RS14345 YPZ3_2403 YPZ3_RS14345 3105272 3106051 + transposase gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14345 YPZ3_RS14350 YPZ3_2404 YPZ3_RS14350 3106241 3106972 + pyridoxine 5'-phosphate synthase involved in the de novo synthesis of pyridoxine (Vitamin B6) gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14350 YPZ3_RS14355 YPZ3_2405 acpS acpS 3106972 3107352 + holo-ACP synthase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14355 YPZ3_RS14360 YPZ3_RS14360 YPZ3_RS14360 3107409 3107564 + invasin gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14360 YPZ3_RS14365 YPZ3_2406 YPZ3_RS14365 3107554 3108012 + transposase gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14365 YPZ3_RS14370 YPZ3_RS14370 YPZ3_RS14370 3108168 3108428 - ferredoxin gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14370 YPZ3_RS14375 YPZ3_2407 YPZ3_RS14375 3108590 3109429 - transcriptional regulator gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14375 YPZ3_RS14380 YPZ3_2408 murQ murQ 3109637 3110524 + N-acetylmuramic acid 6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14380 YPZ3_RS14385 YPZ3_2409 YPZ3_RS14385 3110751 3111447 + hypothetical protein gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14385 YPZ3_RS14390 YPZ3_2410 YPZ3_RS14390 3111518 3112120 + adenosine deaminase gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14390 YPZ3_RS14395 YPZ3_2411 YPZ3_RS14395 3112229 3113689 - murein transglycosylase gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14395 YPZ3_RS14400 YPZ3_2412 YPZ3_RS14400 3114005 3117895 + phosphoribosylformylglycinamidine synthase catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14400 YPZ3_RS14405 YPZ3_2413 YPZ3_RS14405 3118307 3118756 - hypothetical protein gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14405 YPZ3_RS14410 YPZ3_2414 YPZ3_RS14410 3119208 3119768 - hypothetical protein gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14410 YPZ3_RS14415 YPZ3_RS14415 YPZ3_RS14415 3120787 3121005 + transposase gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14415 YPZ3_RS14420 YPZ3_2415 YPZ3_RS14420 3120995 3121453 + transposase gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14420 YPZ3_RS14425 YPZ3_2416 YPZ3_RS14425 3121674 3123110 + two-component system sensor histidine kinase part of the GlrKR two-component signal transduction system involved in the regulation of glmY gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14425 YPZ3_RS14430 YPZ3_2417 YPZ3_RS14430 3123114 3124181 + membrane protein gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14430 YPZ3_RS14435 YPZ3_2418 YPZ3_RS14435 3124144 3125481 + transcriptional regulator with GlrK is part of a two-component signal transduction system regulating glmY gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14435 YPZ3_RS14440 YPZ3_2419 YPZ3_RS14440 3125641 3127263 + NAD synthetase NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14440 YPZ3_RS14445 YPZ3_2420 YPZ3_RS14445 3127278 3127616 + nitrogen regulatory protein P-II indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14445 YPZ3_RS14450 YPZ3_2421 YPZ3_RS14450 3127785 3128156 - hypothetical protein gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14450 YPZ3_RS14455 YPZ3_2422 YPZ3_RS14455 3128122 3128685 - GntR family transcriptional regulator gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14455 YPZ3_RS14460 YPZ3_2423 YPZ3_RS14460 3129149 3130339 - flavohemoprotein flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14460 YPZ3_RS14465 YPZ3_2424 YPZ3_RS14465 3130880 3132133 + serine hydroxymethyltransferase gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14465 YPZ3_RS14470 YPZ3_RS14470 YPZ3_RS14470 3132285 3132467 + membrane protein gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14470 YPZ3_RS14475 YPZ3_2425 YPZ3_RS14475 3132586 3133125 + attachment protein gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14475 YPZ3_RS14480 YPZ3_2426 YPZ3_RS14480 3133477 3134634 + 3-phenylpropionic acid transporter transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14480 YPZ3_RS14485 YPZ3_2427 YPZ3_RS14485 3134631 3135992 - stationary phase inducible protein CsiE gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14485 YPZ3_RS14490 YPZ3_2428 YPZ3_RS14490 3136134 3136808 + membrane protein gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14490 YPZ3_RS14495 YPZ3_2429 YPZ3_RS14495 3136799 3137821 + nickel transporter gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14495 YPZ3_RS14500 YPZ3_2430 YPZ3_RS14500 3137968 3138426 - transposase gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14500 YPZ3_RS14505 YPZ3_2431 YPZ3_RS14505 3138630 3139433 - inositol monophosphatase gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14505 YPZ3_RS14510 YPZ3_2432 YPZ3_RS14510 3139552 3140325 + tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14510 YPZ3_RS14515 YPZ3_2433 YPZ3_RS14515 3140481 3140975 + Fe-S cluster assembly transcriptional regulator IscR gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14515 YPZ3_RS14520 YPZ3_2434 YPZ3_RS14520 3141029 3142258 + cysteine desulfurase catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14520 YPZ3_RS14525 YPZ3_2435 YPZ3_RS14525 3142289 3142675 + Fe-S cluster assembly scaffold IscU gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14525 YPZ3_RS14530 YPZ3_RS14530 iscA iscA 3142945 3143268 + iron-binding protein forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14530 YPZ3_RS14535 YPZ3_2436 hscB hscB 3143379 3143903 + co-chaperone protein HscB J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14535 YPZ3_RS14540 YPZ3_2437 hscA hscA 3144308 3146098 + chaperone protein HscA involved in the maturation of iron-sulfur cluster-containing proteins gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14540 YPZ3_RS14545 YPZ3_2438 YPZ3_RS14545 3146101 3146436 + (2Fe-2S) ferredoxin gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14545 YPZ3_RS14550 YPZ3_RS14550 YPZ3_RS14550 3146466 3146666 + hypothetical protein gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14550 YPZ3_RS14555 YPZ3_2439 YPZ3_RS14555 3146806 3148104 + peptidase B catalyzes the removal of an N-terminal amino acid from a peptide or arylamide gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14555 YPZ3_RS14560 YPZ3_2440 YPZ3_RS14560 3148183 3149136 + endopeptidase IV gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14560 YPZ3_RS14565 YPZ3_2441 YPZ3_RS14565 3149474 3149794 - autotransporter gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14565 YPZ3_RS14570 YPZ3_2442 YPZ3_RS14570 3149760 3152918 - pertactin gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14570 YPZ3_RS14575 YPZ3_2443 YPZ3_RS14575 3153476 3157621 - autotransporter gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14575 YPZ3_RS14580 YPZ3_RS14580 YPZ3_RS14580 3158136 3158393 - hypothetical protein gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14580 YPZ3_RS14585 YPZ3_2444 YPZ3_RS14585 3158568 3160988 + hypothetical protein gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14585 YPZ3_RS14590 YPZ3_2445 YPZ3_RS14590 3161315 3161743 + nucleoside diphosphate kinase catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14590 YPZ3_RS14595 YPZ3_2446 YPZ3_RS14595 3162005 3163201 + 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14595 YPZ3_RS14600 YPZ3_2447 YPZ3_RS14600 3163355 3164104 + pilus assembly protein PilW gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14600 YPZ3_RS14605 YPZ3_2448 YPZ3_RS14605 3164094 3165131 + cytoskeleton protein RodZ gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14605 YPZ3_RS14610 YPZ3_2449 YPZ3_RS14610 3165193 3166320 + 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14610 YPZ3_RS14615 YPZ3_2450 hisS hisS 3166529 3167803 + histidine--tRNA ligase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14615 YPZ3_RS14620 YPZ3_2451 YPZ3_RS14620 3167817 3168452 + membrane protein gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14620 YPZ3_RS14625 YPZ3_2452 YPZ3_RS14625 3168464 3169645 + outer membrane protein assembly factor BamB gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14625 YPZ3_RS14630 YPZ3_2453 YPZ3_RS14630 3169793 3171280 + GTPase Der gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14630 YPZ3_RS14635 YPZ3_2454 YPZ3_RS14635 3171627 3172583 + transporter gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14635 YPZ3_RS14640 YPZ3_RS14640 YPZ3_RS14640 3172632 3172856 + hypothetical protein gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14640 YPZ3_RS14645 YPZ3_2455 xseA xseA 3172957 3174336 - exodeoxyribonuclease 7 large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14645 YPZ3_RS14650 YPZ3_2456 YPZ3_RS14650 3174506 3175969 + inosine-5-monophosphate dehydrogenase gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14650 YPZ3_RS14655 YPZ3_RS14655 YPZ3_RS14655 3176041 3176166 - hypothetical protein gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14655 YPZ3_RS14660 YPZ3_2457 guaA guaA 3176149 3177726 + GMP synthase [glutamine-hydrolyzing] contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14660 YPZ3_RS14665 YPZ3_RS14665 YPZ3_RS14665 3177938 3178111 + transposase gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14665 YPZ3_RS14670 YPZ3_2458 YPZ3_RS14670 3178101 3178559 + transposase gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14670 YPZ3_RS14675 YPZ3_2459 YPZ3_RS14675 3178719 3179198 - hypothetical protein gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14675 YPZ3_RS14680 YPZ3_2460 YPZ3_RS14680 3179222 3179620 - membrane protein gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14680 YPZ3_RS14685 YPZ3_RS14685 YPZ3_RS14685 3179684 3180079 - membrane protein gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14685 YPZ3_RS14690 YPZ3_RS14690 YPZ3_RS14690 3180141 3180536 - membrane protein gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14690 YPZ3_RS14695 YPZ3_2461 YPZ3_RS14695 3180600 3180995 - membrane protein gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14695 YPZ3_RS14700 YPZ3_2462 YPZ3_RS14700 3180992 3181627 - membrane protein gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14700 YPZ3_RS14705 YPZ3_2463 YPZ3_RS14705 3181718 3182926 + transposase gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14705 YPZ3_RS14710 YPZ3_RS14710 YPZ3_RS14710 3182938 3183216 - hypothetical protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14710 YPZ3_RS14715 YPZ3_2464 YPZ3_RS14715 3183275 3183742 - membrane protein gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14715 YPZ3_RS14720 YPZ3_2465 YPZ3_RS14720 3184264 3185064 + bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14720 YPZ3_RS14725 YPZ3_2466 YPZ3_RS14725 3185126 3185872 - hypothetical protein gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14725 YPZ3_RS14730 YPZ3_2467 YPZ3_RS14730 3186245 3186754 + hypothetical protein gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14730 YPZ3_RS14735 YPZ3_2468 YPZ3_RS14735 3187041 3187931 - lipid kinase cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14735 YPZ3_RS14740 YPZ3_2469 YPZ3_RS14740 3188567 3189961 - protease gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14740 YPZ3_RS14745 YPZ3_2470 YPZ3_RS14745 3190236 3190574 - hypothetical protein gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14745 YPZ3_RS14750 YPZ3_2471 YPZ3_RS14750 3190711 3191430 - two-component system response regulator response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14750 YPZ3_RS14755 YPZ3_RS14755 YPZ3_RS14755 3191440 3191697 - ATPase gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14755 YPZ3_RS14760 YPZ3_2472 YPZ3_RS14760 3191709 3192824 - signal transduction histidine kinase gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14760 YPZ3_RS14765 YPZ3_2473 YPZ3_RS14765 3192855 3194252 - transporter gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14765 YPZ3_RS14770 YPZ3_2474 YPZ3_RS14770 3194286 3197360 - multidrug resistance protein MdtC Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14770 YPZ3_RS14775 YPZ3_2475 YPZ3_RS14775 3197357 3200515 - multidrug resistance protein MdtB Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14775 YPZ3_RS14780 YPZ3_2476 YPZ3_RS14780 3200515 3201849 - multidrug resistance protein MdtA gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14780 YPZ3_RS14785 YPZ3_2477 YPZ3_RS14785 3202213 3203298 - ABC transporter ATP-binding protein gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14785 YPZ3_RS14790 YPZ3_2478 YPZ3_RS14790 3203681 3205186 - GntR family transcriptional regulator gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14790 YPZ3_RS14795 YPZ3_2479 YPZ3_RS14795 3205368 3206657 + 4-aminobutyrate aminotransferase catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14795 YPZ3_RS14800 YPZ3_2480 YPZ3_RS14800 3206710 3207738 + polyamine ABC transporter permease gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14800 YPZ3_RS14805 YPZ3_2481 YPZ3_RS14805 3207785 3209050 + ABC transporter permease gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14805 YPZ3_RS14810 YPZ3_2482 YPZ3_RS14810 3209112 3209960 + ABC transporter permease gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14810 YPZ3_RS14815 YPZ3_2483 YPZ3_RS14815 3210232 3211584 - chaperone gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14815 YPZ3_RS14820 YPZ3_2484 YPZ3_RS14820 3211724 3213199 - dihydroorotate dehydrogenase gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14820 YPZ3_RS14825 YPZ3_RS14825 YPZ3_RS14825 3213251 3213439 - hypothetical protein gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14825 YPZ3_RS14830 YPZ3_2485 YPZ3_RS14830 3213575 3215134 - exopolyphosphatase gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14830 YPZ3_RS14835 YPZ3_2486 YPZ3_RS14835 3215145 3217208 - polyphosphate kinase gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14835 YPZ3_RS14840 YPZ3_2487 YPZ3_RS14840 3217479 3219710 + phosphate ABC transporter permease gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14840 YPZ3_RS14845 YPZ3_2488 YPZ3_RS14845 3219770 3221422 + phosphate ABC transporter permease gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14845 YPZ3_RS14850 YPZ3_2489 pstB pstB 3221450 3222262 + phosphate import ATP-binding protein PstB 1 ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14850 YPZ3_RS14855 YPZ3_2490 YPZ3_RS14855 3222490 3222870 + hypothetical protein gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14855 YPZ3_RS14860 YPZ3_RS14860 YPZ3_RS14860 3222957 3223678 + N-methylation of lysine residues in flagellin gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14860 YPZ3_RS14865 YPZ3_2492 YPZ3_RS14865 3223772 3224317 - spermidine N1-acetyltransferase catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14865 YPZ3_RS14870 YPZ3_2493 purN purN 3224546 3225184 - phosphoribosylglycinamide formyltransferase glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14870 YPZ3_RS14875 YPZ3_2494 YPZ3_RS14875 3225299 3226342 - phosphoribosylformylglycinamidine cyclo-ligase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14875 YPZ3_RS14880 YPZ3_2495 upp upp 3226739 3227365 + uracil phosphoribosyltransferase Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14880 YPZ3_RS14885 YPZ3_2496 YPZ3_RS14885 3227541 3227999 + transposase gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14885 YPZ3_RS14890 YPZ3_RS14890 YPZ3_RS14890 3228146 3228358 - ribosome-associated protein gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14890 YPZ3_RS14895 YPZ3_2497 YPZ3_RS14895 3228373 3229239 - bifunctional protein FolD gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14895 YPZ3_RS14900 YPZ3_t36 YPZ3_RS14900 3229454 3229530 + tRNA-Arg tRNA gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14900 YPZ3_RS14905 YPZ3_RS14905 YPZ3_RS14905 3229594 3229776 - hypothetical protein gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14905 YPZ3_RS14910 YPZ3_RS14910 YPZ3_RS14910 3230035 3230235 - hypothetical protein gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14910 YPZ3_RS14915 YPZ3_2498 YPZ3_RS14915 3230349 3230846 - hypothetical protein gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14915 YPZ3_RS14920 YPZ3_RS14920 YPZ3_RS14920 3230884 3230997 - hypothetical protein gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14920 YPZ3_RS14925 YPZ3_RS14925 YPZ3_RS14925 3230982 3231320 - hypothetical protein gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14925 YPZ3_RS14930 YPZ3_RS14930 YPZ3_RS14930 3231893 3232099 + hypothetical protein gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14930 YPZ3_RS14935 YPZ3_RS14935 YPZ3_RS14935 3232096 3232272 + hypothetical protein gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14935 YPZ3_RS14940 YPZ3_2499 YPZ3_RS14940 3232499 3233101 + membrane protein gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14940 YPZ3_RS14945 YPZ3_2500 YPZ3_RS14945 3233094 3234023 + phosphatidate cytidylyltransferase gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14945 YPZ3_RS14950 YPZ3_2501 YPZ3_RS14950 3234033 3234665 + acyltransferase gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14950 YPZ3_RS14955 YPZ3_2502 YPZ3_RS14955 3234662 3236425 + methyltransferase gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14955 YPZ3_RS14960 YPZ3_2503 YPZ3_RS14960 3236418 3237737 + hypothetical protein gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14960 YPZ3_RS14965 YPZ3_2504 YPZ3_RS14965 3237719 3238120 + membrane protein gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14965 YPZ3_RS14970 YPZ3_2505 YPZ3_RS14970 3238217 3238522 + membrane protein gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14970 YPZ3_RS14975 YPZ3_2506 YPZ3_RS14975 3238889 3239668 - transposase gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14975 YPZ3_RS14980 YPZ3_2507 YPZ3_RS14980 3239668 3240690 - transposase gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14980 YPZ3_RS14985 YPZ3_2508 YPZ3_RS14985 3240784 3241677 + LysR family transcriptional regulator gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14985 YPZ3_RS14990 YPZ3_2509 YPZ3_RS14990 3241732 3242721 - aldo/keto reductase gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14990 YPZ3_RS14995 YPZ3_2510 YPZ3_RS14995 3242747 3243598 - 2%2C5-diketo-D-gluconic acid reductase gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS14995 YPZ3_RS15000 YPZ3_RS15000 YPZ3_RS15000 3243789 3243914 + hypothetical protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15000 YPZ3_RS15005 YPZ3_RS15005 YPZ3_RS15005 3243911 3244054 + hypothetical protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15005 YPZ3_RS15010 YPZ3_2511 YPZ3_RS15010 3244071 3245699 + hypothetical protein gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15010 YPZ3_RS15015 YPZ3_2512 YPZ3_RS15015 3245778 3248159 - beta-glucosidase gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15015 YPZ3_RS15020 YPZ3_2513 YPZ3_RS15020 3248318 3248848 - membrane protein gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15020 YPZ3_RS15025 YPZ3_2514 YPZ3_RS15025 3248841 3251048 - membrane protein gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15025 YPZ3_RS15030 YPZ3_2515 YPZ3_RS15030 3251500 3252708 + transposase gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15030 YPZ3_RS15035 YPZ3_2516 YPZ3_RS15035 3252787 3253095 + hypothetical protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15035 YPZ3_RS15040 YPZ3_2517 YPZ3_RS15040 3253110 3253691 - hypothetical protein gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15040 YPZ3_RS15045 YPZ3_2518 YPZ3_RS15045 3254226 3256142 - autotransporter gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15045 YPZ3_RS15050 YPZ3_RS15050 YPZ3_RS15050 3256951 3257190 + hypothetical protein gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15050 YPZ3_RS15055 YPZ3_RS15055 YPZ3_RS15055 3257229 3257480 + hypothetical protein gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15055 YPZ3_RS15060 YPZ3_2519 YPZ3_RS15060 3257504 3258076 + hypothetical protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15060 YPZ3_RS15065 YPZ3_RS15065 YPZ3_RS15065 3258088 3258489 - membrane protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15065 YPZ3_RS15070 YPZ3_RS15070 YPZ3_RS15070 3258722 3259124 - hypothetical protein gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15070 YPZ3_RS15075 YPZ3_2520 YPZ3_RS15075 3259392 3259973 - membrane protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15075 YPZ3_RS15080 YPZ3_RS15080 YPZ3_RS15080 3260646 3260891 + DNA-binding protein gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15080 YPZ3_RS15085 YPZ3_2521 YPZ3_RS15085 3261104 3262513 - penicillin-binding protein 1C gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15085 YPZ3_RS15090 YPZ3_2522 YPZ3_RS15090 3262670 3263878 - transposase gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15090 YPZ3_RS15095 YPZ3_2523 YPZ3_RS15095 3264018 3265275 + PTS beta-glucoside transporter subunit IIBC gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15095 YPZ3_RS15100 YPZ3_2524 YPZ3_RS15100 3265392 3265940 - NUDIX hydrolase gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15100 YPZ3_RS15105 YPZ3_2525 YPZ3_RS15105 3266162 3266713 - phosphodiesterase gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15105 YPZ3_RS15110 YPZ3_2526 YPZ3_RS15110 3266901 3267593 - diguanylate phosphodiesterase gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15110 YPZ3_RS15115 YPZ3_2527 YPZ3_RS15115 3267947 3268855 + epimerase gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15115 YPZ3_RS15120 YPZ3_2528 YPZ3_RS15120 3268979 3269776 - histidine ABC transporter ATP-binding protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15120 YPZ3_RS15125 YPZ3_2529 YPZ3_RS15125 3269790 3270506 - histidine/lysine/arginine/ornithine ABC transporter permease HisM with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15125 YPZ3_RS15130 YPZ3_2530 YPZ3_RS15130 3270503 3271189 - histidine/lysine/arginine/ornithine ABC transporter permease HisQ with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15130 YPZ3_RS15135 YPZ3_2531 YPZ3_RS15135 3271292 3272074 - amino acid ABC transporter substrate-binding protein with HisPMQ is involved in the transport of histidine gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15135 YPZ3_RS15140 YPZ3_2532 YPZ3_RS15140 3272599 3273171 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15140 YPZ3_RS15145 YPZ3_2533 YPZ3_RS15145 3273418 3274935 - amidophosphoribosyltransferase Catalyzes first step of the de novo purine nucleotide biosynthetic pathway gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15145 YPZ3_RS15150 YPZ3_2534 YPZ3_RS15150 3274948 3275457 - colicin V production protein membrane protein required for colicin V production gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15150 YPZ3_RS15155 YPZ3_2535 YPZ3_RS15155 3275769 3276491 - cell division protein DedD gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15155 YPZ3_RS15160 YPZ3_2536 YPZ3_RS15160 3276611 3277915 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15160 YPZ3_RS15165 YPZ3_2537 YPZ3_RS15165 3278164 3279078 - acetyl-CoA carboxylase carboxyltransferase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15165 YPZ3_RS15170 YPZ3_2538 YPZ3_RS15170 3279309 3279971 - membrane protein gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15170 YPZ3_RS15175 YPZ3_2539 truA truA 3280128 3280958 - tRNA pseudouridine synthase A mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15175 YPZ3_RS15180 YPZ3_2540 YPZ3_RS15180 3281009 3282019 - semialdehyde dehydrogenase gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15180 YPZ3_RS15185 YPZ3_2541 YPZ3_RS15185 3282189 3283316 - erythronate-4-phosphate dehydrogenase gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15185 YPZ3_RS15190 YPZ3_2542 YPZ3_RS15190 3283363 3284148 - AraC family transcriptional regulator gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15190 YPZ3_RS15195 YPZ3_RS15195 YPZ3_RS15195 3284135 3284296 - hypothetical protein gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15195 YPZ3_RS15200 YPZ3_2543 YPZ3_RS15200 3284374 3285291 + multidrug DMT transporter gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15200 YPZ3_RS15205 YPZ3_2544 YPZ3_RS15205 3285576 3286613 + flagella biosynthesis regulator gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15205 YPZ3_RS15210 YPZ3_2545 YPZ3_RS15210 3286955 3287485 - fimbria A protein gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15210 YPZ3_RS15215 YPZ3_2546 YPZ3_RS15215 3288276 3288968 + racemase gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15215 YPZ3_RS15220 YPZ3_2547 YPZ3_RS15220 3289376 3290599 - 3-oxoacyl-ACP synthase FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15220 YPZ3_RS15225 YPZ3_2548 mnmC mnmC 3290771 3292840 + tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15225 YPZ3_RS15230 YPZ3_RS15230 YPZ3_RS15230 3293018 3293296 - hypothetical protein gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15230 YPZ3_RS15235 YPZ3_2549 YPZ3_RS15235 3293354 3293896 - hypothetical protein gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15235 YPZ3_RS15240 YPZ3_2550 YPZ3_RS15240 3293996 3294802 - membrane protein gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15240 YPZ3_RS15245 YPZ3_2551 mepA mepA 3294806 3295633 - penicillin-insensitive murein endopeptidase D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15245 YPZ3_RS15250 YPZ3_2552 YPZ3_RS15250 3295639 3296724 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15250 YPZ3_RS15255 YPZ3_2553 YPZ3_RS15255 3296801 3297733 - 50S ribosomal protein L3 glutamine methyltransferase involved in methylation of ribosomal protein L3 gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15255 YPZ3_RS15260 YPZ3_2554 YPZ3_RS15260 3298103 3298633 + peptidase S10 gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15260 YPZ3_RS15265 YPZ3_2555 YPZ3_RS15265 3299011 3299502 - phosphohistidine phosphatase gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15265 YPZ3_RS15270 YPZ3_2556 fadJ fadJ 3300071 3302395 - fatty acid oxidation complex subunit alpha multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15270 YPZ3_RS15275 YPZ3_2557 YPZ3_RS15275 3302395 3303705 - 3-ketoacyl-CoA thiolase gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15275 YPZ3_RS15280 YPZ3_RS15280 YPZ3_RS15280 3303992 3304276 - hypothetical protein gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15280 YPZ3_RS15285 YPZ3_2558 YPZ3_RS15285 3304702 3305967 + long-chain fatty acid outer membrane transporter gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15285 YPZ3_RS15290 YPZ3_2559 YPZ3_RS15290 3306074 3306838 - membrane protein involved in maintaining OM lipid asymmetry gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15290 YPZ3_RS15295 YPZ3_2560 YPZ3_RS15295 3306874 3308100 - cytochrome C gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15295 YPZ3_RS15300 YPZ3_2561 YPZ3_RS15300 3308100 3308612 - cytochrome C biogenesis protein gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15300 YPZ3_RS15305 YPZ3_2562 YPZ3_RS15305 3308609 3309175 - thiol:disulfide interchange protein DsbE cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15305 YPZ3_RS15310 YPZ3_2563 YPZ3_RS15310 3309172 3311142 - heme lyase subunit CcmF cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15310 YPZ3_RS15315 YPZ3_2564 YPZ3_RS15315 3311139 3311633 - cytochrome c-type biogenesis protein CcmE CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15315 YPZ3_RS15320 YPZ3_2565 YPZ3_RS15320 3311630 3311932 - heme exporter protein D gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15320 YPZ3_RS15325 YPZ3_2566 YPZ3_RS15325 3311929 3312666 - heme exporter protein C with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15325 YPZ3_RS15330 YPZ3_2567 YPZ3_RS15330 3312729 3313388 - heme exporter protein B with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15330 YPZ3_RS15335 YPZ3_2568 YPZ3_RS15335 3313358 3314014 - cytochrome c biogenesis ATP-binding export protein CcmA gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15335 YPZ3_RS15340 YPZ3_2569 YPZ3_RS15340 3314459 3314926 - hypothetical protein gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15340 YPZ3_RS15345 YPZ3_t37 YPZ3_RS15345 3315181 3315255 - tRNA-Arg tRNA gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15345 YPZ3_RS15350 YPZ3_2570 YPZ3_RS15350 3315542 3316084 + membrane protein gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15350 YPZ3_RS15355 YPZ3_2571 YPZ3_RS15355 3316089 3318128 + membrane protein gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15355 YPZ3_RS15360 YPZ3_2572 YPZ3_RS15360 3318504 3318845 + hypothetical protein gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15360 YPZ3_RS15365 YPZ3_2573 YPZ3_RS15365 3318920 3319267 - membrane protein gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15365 YPZ3_RS15370 YPZ3_2574 YPZ3_RS15370 3319292 3319771 - lysozyme gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15370 YPZ3_RS15375 YPZ3_2575 YPZ3_RS15375 3319868 3320674 - ImpE family protein gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15375 YPZ3_RS15380 YPZ3_2576 YPZ3_RS15380 3320694 3321536 - hypothetical protein gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15380 YPZ3_RS15385 YPZ3_RS15385 YPZ3_RS15385 3321542 3321802 - hypothetical protein gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15385 YPZ3_RS15390 YPZ3_2577 YPZ3_RS15390 3321901 3324507 - type IV secretion protein Rhs gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15390 YPZ3_RS15395 YPZ3_2578 YPZ3_RS15395 3324834 3328661 - type VI secretion protein IcmF gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15395 YPZ3_RS15400 YPZ3_RS15400 YPZ3_RS15400 3328670 3329506 - polymerase gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15400 YPZ3_RS15405 YPZ3_2580 YPZ3_RS15405 3329522 3330301 - transposase gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15405 YPZ3_RS15410 YPZ3_2581 YPZ3_RS15410 3330301 3331323 - transposase gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15410 YPZ3_RS15415 YPZ3_2582 YPZ3_RS15415 3331337 3332005 - hypothetical protein gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15415 YPZ3_RS15420 YPZ3_2583 YPZ3_RS15420 3332002 3333351 - type VI secretion protein gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15420 YPZ3_RS15425 YPZ3_2584 YPZ3_RS15425 3333355 3333894 - type VI secretion protein gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15425 YPZ3_RS15430 YPZ3_2585 YPZ3_RS15430 3334168 3334653 - type VI secretion system effector gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15430 YPZ3_RS15435 YPZ3_2586 YPZ3_RS15435 3334979 3336481 - type VI secretion protein EvpB gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15435 YPZ3_RS15440 YPZ3_2587 YPZ3_RS15440 3336505 3337029 - hypothetical protein gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15440 YPZ3_RS15445 YPZ3_2588 YPZ3_RS15445 3337134 3337742 - fimbrial protein gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15445 YPZ3_RS15450 YPZ3_2589 YPZ3_RS15450 3337727 3338917 - fimbrial usher protein gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15450 YPZ3_RS15455 YPZ3_2590 YPZ3_RS15455 3338942 3340150 + transposase gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15455 YPZ3_RS15460 YPZ3_2591 YPZ3_RS15460 3340172 3341722 - fimbrial usher protein gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15460 YPZ3_RS15465 YPZ3_2592 YPZ3_RS15465 3341850 3342611 - pilus assembly protein gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15465 YPZ3_RS15470 YPZ3_2593 YPZ3_RS15470 3342768 3343313 - frimbrial protein gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15470 YPZ3_RS15475 YPZ3_2594 YPZ3_RS15475 3343514 3346189 - ATPase AAA gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15475 YPZ3_RS15480 YPZ3_2595 YPZ3_RS15480 3346972 3348852 + type VI secretion protein gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15480 YPZ3_RS15485 YPZ3_2596 YPZ3_RS15485 3348852 3349877 + type VI secretion protein gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15485 YPZ3_RS15490 YPZ3_2597 YPZ3_RS15490 3349976 3351157 + membrane protein gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15490 YPZ3_RS15495 YPZ3_2598 YPZ3_RS15495 3351164 3352195 + fimbrial protein gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15495 YPZ3_RS15500 YPZ3_2599 YPZ3_RS15500 3352235 3353572 + glycosyltransferase gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15500 YPZ3_RS15505 YPZ3_2600 YPZ3_RS15505 3353569 3354252 + membrane protein gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15505 YPZ3_RS15510 YPZ3_2601 YPZ3_RS15510 3354253 3355935 + membrane protein gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15510 YPZ3_RS15515 YPZ3_2602 YPZ3_RS15515 3355932 3356414 + hypothetical protein gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15515 YPZ3_RS15520 YPZ3_2603 YPZ3_RS15520 3356772 3357374 - LuxR family transcriptional regulator gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15520 YPZ3_RS15525 YPZ3_2604 YPZ3_RS15525 3358629 3359723 - murein hydrolase B membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15525 YPZ3_RS15530 YPZ3_2605 YPZ3_RS15530 3360052 3361071 + iron ABC transporter substrate-binding protein gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15530 YPZ3_RS15535 YPZ3_2606 YPZ3_RS15535 3361127 3362713 + iron ABC transporter permease gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15535 YPZ3_RS15540 YPZ3_2607 YPZ3_RS15540 3362710 3363759 + Fe(3+) ions import ATP-binding protein FbpC gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15540 YPZ3_RS15545 YPZ3_2608 YPZ3_RS15545 3363832 3364356 - membrane protein gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15545 YPZ3_RS15550 YPZ3_RS15550 YPZ3_RS15550 3364823 3365302 + hypothetical protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15550 YPZ3_RS15555 YPZ3_2609 YPZ3_RS15555 3365532 3366380 - hypothetical protein gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15555 YPZ3_RS15560 YPZ3_2610 YPZ3_RS15560 3367211 3369637 + dimethyl sulfoxide reductase subunit A gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15560 YPZ3_RS15565 YPZ3_2611 YPZ3_RS15565 3369649 3370266 + dimethyl sulfoxide reductase subunit B gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15565 YPZ3_RS15570 YPZ3_2612 YPZ3_RS15570 3370268 3371044 + diguanylate cyclase gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15570 YPZ3_RS15575 YPZ3_2613 YPZ3_RS15575 3371526 3372122 + nitrate reductase subunit delta gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15575 YPZ3_RS15580 YPZ3_2614 YPZ3_RS15580 3372119 3372688 + (Fe-S)-binding protein gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15580 YPZ3_RS15585 YPZ3_2615 YPZ3_RS15585 3372934 3373590 - lipoprotein gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15585 YPZ3_RS15590 YPZ3_2616 YPZ3_RS15590 3373587 3373943 - lipoprotein gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15590 YPZ3_RS15595 YPZ3_2617 YPZ3_RS15595 3373970 3374641 - lipoprotein gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15595 YPZ3_RS15600 YPZ3_2618 YPZ3_RS15600 3375231 3375662 + antitoxin HicB gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15600 YPZ3_RS15605 YPZ3_2619 YPZ3_RS15605 3375757 3376281 - cytochrome B gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15605 YPZ3_RS15610 YPZ3_2620 YPZ3_RS15610 3376545 3377780 - aminotransferase gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15610 YPZ3_RS15615 YPZ3_2621 YPZ3_RS15615 3378046 3379293 + diguanylate cyclase gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15615 YPZ3_RS15620 YPZ3_2622 glk glk 3379371 3380342 - glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15620 YPZ3_RS15625 YPZ3_2623 YPZ3_RS15625 3380523 3380999 - Na+-translocating NADH-quinone reductase subunit E gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15625 YPZ3_RS15630 YPZ3_2624 YPZ3_RS15630 3381102 3381980 + LysR family transcriptional regulator gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15630 YPZ3_RS15635 YPZ3_2625 YPZ3_RS15635 3382116 3383105 + glyceraldehyde 3-phosphate reductase gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15635 YPZ3_RS15640 YPZ3_RS15640 YPZ3_RS15640 3383375 3383689 + hypothetical protein gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15640 YPZ3_RS15645 YPZ3_2627 YPZ3_RS15645 3383782 3385011 - divalent metal cation transporter MntH gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15645 YPZ3_RS15650 YPZ3_2628 YPZ3_RS15650 3385462 3386646 + nucleoside permease gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15650 YPZ3_RS15655 YPZ3_t38 YPZ3_RS15655 3387023 3387098 - tRNA-Lys tRNA gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15655 YPZ3_RS15660 YPZ3_t39 YPZ3_RS15660 3387298 3387373 - tRNA-Val tRNA gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15660 YPZ3_RS15665 YPZ3_t40 YPZ3_RS15665 3387418 3387493 - tRNA-Val tRNA gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15665 YPZ3_RS15670 YPZ3_t41 YPZ3_RS15670 3387530 3387605 - tRNA-Val tRNA gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15670 YPZ3_RS15675 YPZ3_2629 gltX gltX 3387880 3389295 + glutamate--tRNA ligase catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15675 YPZ3_RS15680 YPZ3_2630 YPZ3_RS15680 3389488 3389946 + transposase gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15680 YPZ3_RS15685 YPZ3_t42 YPZ3_RS15685 3390237 3390312 + tRNA-Ala tRNA gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15685 YPZ3_RS15690 YPZ3_t43 YPZ3_RS15690 3390390 3390465 + tRNA-Ala tRNA gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15690 YPZ3_RS15695 YPZ3_2631 YPZ3_RS15695 3390660 3391265 + nitrate reductase gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15695 YPZ3_RS15700 YPZ3_2632 YPZ3_RS15700 3391397 3391744 + hypothetical protein gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15700 YPZ3_RS15705 YPZ3_RS15705 YPZ3_RS15705 3391845 3392060 - hypothetical protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15705 YPZ3_RS15710 YPZ3_2633 ligA ligA 3392080 3394092 - DNA ligase this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15710 YPZ3_RS15715 YPZ3_2634 YPZ3_RS15715 3394183 3395169 - Cell division protein ZipA homolog gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15715 YPZ3_RS15720 YPZ3_2635 YPZ3_RS15720 3395418 3396152 + cysteine biosynthesis protein CysZ gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15720 YPZ3_RS15725 YPZ3_2636 YPZ3_RS15725 3396309 3397277 + cysteine synthase A gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15725 YPZ3_RS15730 YPZ3_RS15730 YPZ3_RS15730 3397776 3398033 + PTS sugar transporter gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15730 YPZ3_RS15735 YPZ3_2637 YPZ3_RS15735 3398082 3399809 + phosphoenolpyruvate-protein phosphotransferase Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15735 YPZ3_RS15740 YPZ3_2638 YPZ3_RS15740 3399858 3400367 + PTS glucose transporter subunit IIA phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15740 YPZ3_RS15745 YPZ3_2639 YPZ3_RS15745 3400510 3400968 - transposase gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15745 YPZ3_RS15750 YPZ3_RS15750 YPZ3_RS15750 3400958 3401152 - invasin gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15750 YPZ3_RS15755 YPZ3_2640 YPZ3_RS15755 3401238 3402587 - two-component system sensor histidine kinase gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15755 YPZ3_RS15760 YPZ3_2641 YPZ3_RS15760 3402613 3403296 - two-component system response regulator gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15760 YPZ3_RS15765 YPZ3_2642 YPZ3_RS15765 3403484 3404689 + hemolysin secretion protein D gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15765 YPZ3_RS15770 YPZ3_2643 YPZ3_RS15770 3404693 3406729 + MacB family efflux pump subunit with MacA is involved in the export of macrolide gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15770 YPZ3_RS15775 YPZ3_2644 YPZ3_RS15775 3406984 3408630 - CoA-disulfide reductase gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15775 YPZ3_RS15780 YPZ3_2645 YPZ3_RS15780 3408690 3410150 - permease gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15780 YPZ3_RS15785 YPZ3_RS15785 YPZ3_RS15785 3410147 3410344 - membrane protein gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15785 YPZ3_RS15790 YPZ3_2646 YPZ3_RS15790 3410487 3411494 - peptidase M24 gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15790 YPZ3_RS15795 YPZ3_RS15795 YPZ3_RS15795 3411515 3411706 - creatininase gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15795 YPZ3_RS15800 YPZ3_2647 YPZ3_RS15800 3411740 3412921 - aminotransferase gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15800 YPZ3_RS15805 YPZ3_2648 YPZ3_RS15805 3413629 3415047 + hypothetical protein gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15805 YPZ3_RS15810 YPZ3_2649 YPZ3_RS15810 3415280 3416824 + two-component system sensor histidine kinase gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15810 YPZ3_RS15815 YPZ3_2650 YPZ3_RS15815 3416821 3417528 + two-component system response regulator gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15815 YPZ3_RS15820 YPZ3_2651 YPZ3_RS15820 3417909 3419141 - type III secretion protein GogB gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15820 YPZ3_RS15825 YPZ3_2652 cysM cysM 3419386 3420264 - cysteine synthase B catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15825 YPZ3_RS15830 YPZ3_2653 YPZ3_RS15830 3420435 3421526 - sulfate/thiosulfate import ATP-binding protein CysA gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15830 YPZ3_RS15835 YPZ3_2654 cysW cysW 3421516 3422391 - sulfate/thiosulfate transporter permease subunit Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15835 YPZ3_RS15840 YPZ3_2655 YPZ3_RS15840 3422391 3423224 - sulfate/thiosulfate transporter subunit gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15840 YPZ3_RS15845 YPZ3_2656 YPZ3_RS15845 3423224 3424261 - thiosulfate transporter subunit gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15845 YPZ3_RS15850 YPZ3_2657 YPZ3_RS15850 3424576 3426108 - sialic acid transporter gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15850 YPZ3_RS15855 YPZ3_2658 YPZ3_RS15855 3426713 3427591 - N-acetylmannosamine kinase gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15855 YPZ3_RS15860 YPZ3_RS15860 YPZ3_RS15860 3427588 3427740 - hypothetical protein gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15860 YPZ3_RS15865 YPZ3_2659 YPZ3_RS15865 3427780 3428250 - sugar isomerase gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15865 YPZ3_RS15870 YPZ3_2660 YPZ3_RS15870 3428332 3429204 - N-acetylmannosamine kinase catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15870 YPZ3_RS15875 YPZ3_2661 YPZ3_RS15875 3429473 3430039 + membrane protein gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15875 YPZ3_RS15880 YPZ3_2663 YPZ3_RS15880 3430885 3431508 + N-acetylmannosamine-6-phosphate 2-epimerase Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15880 YPZ3_RS15885 YPZ3_2664 YPZ3_RS15885 3431571 3432464 + N-acetylneuraminate lyase gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15885 YPZ3_RS15890 YPZ3_2665 YPZ3_RS15890 3432562 3433461 - deferrochelatase/peroxidase YfeX gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15890 YPZ3_RS15895 YPZ3_2666 YPZ3_RS15895 3433639 3434250 - hypothetical protein gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15895 YPZ3_RS15900 YPZ3_2667 YPZ3_RS15900 3434609 3435022 + hypothetical protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15900 YPZ3_RS15905 YPZ3_2668 YPZ3_RS15905 3435509 3437788 + autotransporter gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15905 YPZ3_RS15910 YPZ3_2669 YPZ3_RS15910 3437880 3438296 - membrane protein gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15910 YPZ3_RS15915 YPZ3_RS15915 YPZ3_RS15915 3438402 3438587 + hypothetical protein gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15915 YPZ3_RS15920 YPZ3_2670 YPZ3_RS15920 3438769 3439194 - acetyltransferase gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15920 YPZ3_RS15925 YPZ3_2671 YPZ3_RS15925 3439477 3440406 + coproporphyrinogen III oxidase catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15925 YPZ3_RS15930 YPZ3_2672 YPZ3_RS15930 3440406 3440864 + hypothetical protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15930 YPZ3_RS15935 YPZ3_2673 YPZ3_RS15935 3441015 3443300 - NADP-dependent malic enzyme NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15935 YPZ3_RS15940 YPZ3_2674 YPZ3_RS15940 3443496 3444092 - GDP-mannose pyrophosphatase NudK gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15940 YPZ3_RS15945 YPZ3_2675 YPZ3_RS15945 3444276 3444875 - cytochrome C protein NapC with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15945 YPZ3_RS15950 YPZ3_2676 napB napB 3444903 3445370 - nitrate reductase cytochrome C550 subunit small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15950 YPZ3_RS15955 YPZ3_2677 YPZ3_RS15955 3445453 3447945 - periplasmic nitrate reductase periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15955 YPZ3_RS15960 YPZ3_RS15960 YPZ3_RS15960 3447942 3448208 - nitrate reductase gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15960 YPZ3_RS15965 YPZ3_2678 YPZ3_RS15965 3448198 3448701 - ferredoxin-type protein NapF gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15965 YPZ3_RS15970 YPZ3_2679 YPZ3_RS15970 3449534 3450163 + transcriptional regulator nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15970 YPZ3_RS15975 YPZ3_RS15975 YPZ3_RS15975 3450176 3450454 - hypothetical protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15975 YPZ3_RS15980 YPZ3_2680 YPZ3_RS15980 3450869 3454000 + multidrug efflux RND transporter permease subunit gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15980 YPZ3_RS15985 YPZ3_2681 YPZ3_RS15985 3454231 3454815 + hypothetical protein gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15985 YPZ3_RS15990 YPZ3_2682 YPZ3_RS15990 3455104 3455652 + membrane protein gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15990 YPZ3_RS15995 YPZ3_2683 YPZ3_RS15995 3456406 3457581 - anaerobic sulfatase maturase gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS15995 YPZ3_RS16000 YPZ3_2684 YPZ3_RS16000 3457639 3459309 - sulfatase gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16000 YPZ3_RS16005 YPZ3_2685 YPZ3_RS16005 3459790 3460860 - ABC transporter ATP-binding protein gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16005 YPZ3_RS16010 YPZ3_2686 YPZ3_RS16010 3460853 3462622 - spermidine/putrescine ABC transporter permease gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16010 YPZ3_RS16015 YPZ3_2687 YPZ3_RS16015 3462717 3463805 - iron ABC transporter substrate-binding protein gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16015 YPZ3_RS16020 YPZ3_2688 YPZ3_RS16020 3464116 3464589 + hypothetical protein gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16020 YPZ3_RS16025 YPZ3_2689 YPZ3_RS16025 3464749 3465147 + reductase gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16025 YPZ3_RS16030 YPZ3_2690 YPZ3_RS16030 3465149 3466276 + succinyl-diaminopimelate desuccinylase gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16030 YPZ3_RS16035 YPZ3_2691 YPZ3_RS16035 3466273 3466950 + carboxypeptidase gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16035 YPZ3_RS16040 YPZ3_RS16040 YPZ3_RS16040 3467018 3467212 + membrane protein gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16040 YPZ3_RS16045 YPZ3_2692 YPZ3_RS16045 3467417 3469516 - tRNA(Met) cytidine acetyltransferase TmcA cetylates the wobble base C34 of the elongation-specific methionine tRNA gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16045 YPZ3_RS16050 YPZ3_2693 YPZ3_RS16050 3469518 3469970 - membrane protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16050 YPZ3_RS16055 YPZ3_2694 YPZ3_RS16055 3470064 3470930 - hypothetical protein gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16055 YPZ3_RS16060 YPZ3_2695 YPZ3_RS16060 3471149 3471862 - phosphoribosylaminoimidazole-succinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16060 YPZ3_RS16065 YPZ3_2696 YPZ3_RS16065 3472010 3472468 - transposase gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16065 YPZ3_RS16070 YPZ3_RS16070 YPZ3_RS16070 3472458 3472613 - invasin gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16070 YPZ3_RS16075 YPZ3_2697 YPZ3_RS16075 3472643 3473701 - outer membrane protein assembly factor BamC gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16075 YPZ3_RS16080 YPZ3_2698 YPZ3_RS16080 3473719 3474600 - 4-hydroxy-tetrahydrodipicolinate synthase gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16080 YPZ3_RS16085 YPZ3_2699 gcvR gcvR 3474765 3475334 + glycine cleavage system transcriptional regulator negative transcriptional regulator of the gcvTHP operon gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16085 YPZ3_RS16090 YPZ3_2700 bcp bcp 3475337 3475807 + thiol peroxidase bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16090 YPZ3_RS16095 YPZ3_RS16095 YPZ3_RS16095 3476051 3476470 - hypothetical protein gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16095 YPZ3_RS16100 YPZ3_2701 YPZ3_RS16100 3476474 3477169 - hypothetical protein gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16100 YPZ3_RS16105 YPZ3_RS16105 YPZ3_RS16105 3477507 3477680 + hypothetical protein gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16105 YPZ3_RS16110 YPZ3_2702 YPZ3_RS16110 3477769 3478833 - permease gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16110 YPZ3_RS16115 YPZ3_2703 YPZ3_RS16115 3479164 3480648 + hypothetical protein gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16115 YPZ3_RS16120 YPZ3_2704 YPZ3_RS16120 3480755 3481111 + arsenate reductase gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16120 YPZ3_RS16125 YPZ3_2705 YPZ3_RS16125 3481323 3482030 - DnaA regulatory inactivator Hda controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16125 YPZ3_RS16130 YPZ3_2706 YPZ3_RS16130 3482218 3482676 - transposase gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16130 YPZ3_RS16135 YPZ3_RS16135 YPZ3_RS16135 3482666 3482896 - invasin gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16135 YPZ3_RS16140 YPZ3_2707 cysS cysS 3483023 3484408 - cysteine--tRNA ligase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16140 YPZ3_RS16145 YPZ3_2708 YPZ3_RS16145 3484619 3485113 + peptidyl-prolyl cis-trans isomerase gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16145 YPZ3_RS16150 YPZ3_2709 YPZ3_RS16150 3485124 3485846 + UDP-2%2C3-diacylglucosamine hydrolase catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16150 YPZ3_RS16155 YPZ3_2710 purE purE 3486142 3486666 + N5-carboxyaminoimidazole ribonucleotide mutase catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16155 YPZ3_RS16160 YPZ3_2711 YPZ3_RS16160 3486663 3487727 + phosphoribosylaminoimidazole carboxylase gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16160 YPZ3_RS16165 YPZ3_2712 YPZ3_RS16165 3487771 3490200 - permease gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16165 YPZ3_RS16170 YPZ3_2713 YPZ3_RS16170 3490197 3490883 - phosphonate ABC transporter ATP-binding protein gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16170 YPZ3_RS16175 YPZ3_2714 YPZ3_RS16175 3490854 3491489 + multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16175 YPZ3_RS16180 YPZ3_2715 YPZ3_RS16180 3491876 3492652 + oxidoreductase gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16180 YPZ3_RS16185 YPZ3_2716 YPZ3_RS16185 3492729 3493598 + thioredoxin gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16185 YPZ3_RS16190 YPZ3_2717 YPZ3_RS16190 3493793 3494707 + protease gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16190 YPZ3_RS16195 YPZ3_2718 YPZ3_RS16195 3494710 3495159 + membrane protein gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16195 YPZ3_RS16200 YPZ3_2719 YPZ3_RS16200 3495268 3495687 - transcriptional regulator gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16200 YPZ3_RS16205 YPZ3_2720 copA copA 3495894 3498779 + copper exporting ATPase gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16205 YPZ3_RS16210 YPZ3_2721 YPZ3_RS16210 3499300 3500109 + hypothetical protein gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16210 YPZ3_RS16215 YPZ3_2722 YPZ3_RS16215 3500373 3500852 + hypothetical protein gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16215 YPZ3_RS16220 YPZ3_RS16220 YPZ3_RS16220 3500918 3501175 + gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16220 YPZ3_RS16225 YPZ3_RS16225 YPZ3_RS16225 3501189 3501428 + hypothetical protein gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16225 YPZ3_RS16230 YPZ3_2723 YPZ3_RS16230 3501532 3502155 - 5'-nucleotidase gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16230 YPZ3_RS16235 YPZ3_2724 YPZ3_RS16235 3502149 3502940 - metallophosphatase gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16235 YPZ3_RS16240 YPZ3_RS16240 YPZ3_RS16240 3502930 3503187 - protein ushA gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16240 YPZ3_RS16245 YPZ3_2725 YPZ3_RS16245 3503469 3504683 + fosmidomycin resistance protein gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16245 YPZ3_RS16250 YPZ3_2726 YPZ3_RS16250 3504918 3506609 + cation:proton antiport protein YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16250 YPZ3_RS16255 YPZ3_2727 YPZ3_RS16255 3506706 3508010 - inosine/guanosine kinase catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16255 YPZ3_RS16260 YPZ3_RS16260 YPZ3_RS16260 3508214 3509365 - chain-length determining protein gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16260 YPZ3_RS16265 YPZ3_2729 YPZ3_RS16265 3509413 3510786 - phosphomannomutase capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16265 YPZ3_RS16270 YPZ3_2730 YPZ3_RS16270 3510791 3511534 - glycosyl transferase gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16270 YPZ3_RS16275 YPZ3_2731 cpsB cpsB 3511537 3512943 - mannose-1-phosphate guanyltransferase capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16275 YPZ3_RS16280 YPZ3_2732 YPZ3_RS16280 3513137 3514102 - GDP-fucose synthetase bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16280 YPZ3_RS16285 YPZ3_RS16285 YPZ3_RS16285 3514108 3515230 - GDP-mannose 4%2C6-dehydratase catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16285 YPZ3_RS16290 YPZ3_2735 YPZ3_RS16290 3515246 3516259 - mannosyltransferase gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16290 YPZ3_RS16295 YPZ3_2736 YPZ3_RS16295 3516508 3517404 - histidine kinase gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16295 YPZ3_RS16300 YPZ3_2737 YPZ3_RS16300 3517726 3518868 - mannosyltransferase gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16300 YPZ3_RS16305 YPZ3_2738 YPZ3_RS16305 3519248 3519961 - glycosyl transferase gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16305 YPZ3_RS16310 YPZ3_2739 YPZ3_RS16310 3519972 3521315 - O-unit flippase Wzx gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16310 YPZ3_RS16315 YPZ3_2740 YPZ3_RS16315 3521389 3522672 - O-antigen synthesis protein WbyH gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16315 YPZ3_RS16320 YPZ3_2741 YPZ3_RS16320 3522673 3523530 - paratose synthase gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16320 YPZ3_RS16325 YPZ3_2742 YPZ3_RS16325 3523567 3524880 - LPS biosynthesis protein gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16325 YPZ3_RS16330 YPZ3_2743 YPZ3_RS16330 3524898 3525797 - CDP-glucose 4%2C6-dehydratase gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16330 YPZ3_RS16335 YPZ3_RS16335 YPZ3_RS16335 3525829 3525972 - CDP-glycerol glycerophosphotransferase gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16335 YPZ3_RS16340 YPZ3_2744 YPZ3_RS16340 3525977 3526750 - glucose-1-phosphate cytidylyltransferase gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16340 YPZ3_RS16345 YPZ3_2745 YPZ3_RS16345 3526788 3527777 - CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16345 YPZ3_RS16350 YPZ3_2746 YPZ3_RS16350 3528375 3529337 - ferrochelatase gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16350 YPZ3_RS16355 YPZ3_2747 adk adk 3529427 3530071 - adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16355 YPZ3_RS16360 YPZ3_2748 YPZ3_RS16360 3530298 3532172 - chaperone protein HtpG molecular chaperone gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16360 YPZ3_RS16365 YPZ3_2749 recR recR 3532364 3532969 - recombination protein RecR involved in a recombinational process of DNA repair%2C independent of the recBC complex gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16365 YPZ3_RS16370 YPZ3_2750 YPZ3_RS16370 3532969 3533301 - hypothetical protein gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16370 YPZ3_RS16375 YPZ3_2751 YPZ3_RS16375 3533357 3535333 - DNA polymerase III subunit gamma/tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16375 YPZ3_RS16380 YPZ3_2752 YPZ3_RS16380 3535989 3536552 - adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16380 YPZ3_RS16385 YPZ3_RS16385 YPZ3_RS16385 3536985 3537173 + hypothetical protein gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16385 YPZ3_RS16390 YPZ3_2753 YPZ3_RS16390 3537372 3537908 + prephenate dehydrogenase gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16390 YPZ3_RS16395 YPZ3_RS16395 YPZ3_RS16395 3538079 3538234 + hypothetical protein gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16395 YPZ3_RS16400 YPZ3_2754 YPZ3_RS16400 3538574 3541936 - hypothetical protein gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16400 YPZ3_RS16405 YPZ3_2755 YPZ3_RS16405 3542232 3542585 - hypothetical protein gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16405 YPZ3_RS16410 YPZ3_2756 YPZ3_RS16410 3542598 3543254 - transcriptional regulator regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16410 YPZ3_RS16415 YPZ3_2757 YPZ3_RS16415 3543399 3544586 + multidrug transporter with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16415 YPZ3_RS16420 YPZ3_2758 YPZ3_RS16420 3544603 3547755 + multidrug efflux RND transporter permease subunit gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16420 YPZ3_RS16425 YPZ3_RS16425 YPZ3_RS16425 3547941 3548201 + 50S ribosomal protein L31 type B gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16425 YPZ3_RS16430 YPZ3_RS16430 rpmJ rpmJ 3548217 3548360 + 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16430 YPZ3_RS16435 YPZ3_2759 YPZ3_RS16435 3549234 3549587 + hypothetical protein gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16435 YPZ3_RS16440 YPZ3_2760 YPZ3_RS16440 3549746 3550114 + hypothetical protein gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16440 YPZ3_RS16445 YPZ3_RS16445 YPZ3_RS16445 3550163 3550366 + modulating protein YmoA with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16445 YPZ3_RS16450 YPZ3_2761 YPZ3_RS16450 3551254 3551643 + 6-O-methylguanine DNA methyltransferase gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16450 YPZ3_RS16455 YPZ3_2762 YPZ3_RS16455 3551779 3552300 - lipoprotein gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16455 YPZ3_RS16460 YPZ3_2763 YPZ3_RS16460 3552557 3553417 + acyl-CoA thioesterase gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16460 YPZ3_RS16465 YPZ3_2764 YPZ3_RS16465 3553677 3554966 - ammonium transporter gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16465 YPZ3_RS16470 YPZ3_2765 YPZ3_RS16470 3555006 3555344 - nitrogen regulatory protein P-II 2 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16470 YPZ3_RS16475 YPZ3_2766 YPZ3_RS16475 3555754 3557577 - multidrug ABC transporter ATP-binding protein gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16475 YPZ3_RS16480 YPZ3_2767 YPZ3_RS16480 3557570 3559336 - multidrug ABC transporter ATP-binding protein gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16480 YPZ3_RS16485 YPZ3_2768 YPZ3_RS16485 3559438 3559899 - AsnC family transcriptional regulator gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16485 YPZ3_RS16490 YPZ3_2769 YPZ3_RS16490 3560025 3561065 + cysteine synthase gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16490 YPZ3_RS16495 YPZ3_2770 YPZ3_RS16495 3561277 3562098 - HMP-PP phosphatase HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P) gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16495 YPZ3_RS16500 YPZ3_2771 YPZ3_RS16500 3562203 3563906 + hypothetical protein gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16500 YPZ3_RS16505 YPZ3_2772 YPZ3_RS16505 3564171 3564869 + 7-cyano-7-deazaguanine synthase YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16505 YPZ3_RS16510 YPZ3_2773 YPZ3_RS16510 3564955 3565362 - thioesterase gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16510 YPZ3_RS16515 YPZ3_2774 YPZ3_RS16515 3565716 3566162 - transporter gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16515 YPZ3_RS16520 YPZ3_2775 YPZ3_RS16520 3566302 3568188 - peptidyl-prolyl cis-trans isomerase gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16520 YPZ3_RS16525 YPZ3_RS16525 YPZ3_RS16525 3568489 3568761 - transcriptional regulator histone-like DNA-binding protein gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16525 YPZ3_RS16530 YPZ3_2776 YPZ3_RS16530 3568979 3571333 - peptidase gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16530 YPZ3_RS16535 YPZ3_2777 clpX clpX 3571528 3572799 - ATP-dependent Clp protease ATP-binding subunit ClpX binds and unfolds substrates as part of the ClpXP protease gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16535 YPZ3_RS16540 YPZ3_2778 YPZ3_RS16540 3573005 3573628 - ATP-dependent Clp protease proteolytic subunit gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16540 YPZ3_RS16545 YPZ3_2779 YPZ3_RS16545 3574090 3575394 - trigger factor gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16545 YPZ3_RS16550 YPZ3_RS16550 YPZ3_RS16550 3575467 3575652 - hypothetical protein gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16550 YPZ3_RS16555 YPZ3_2780 YPZ3_RS16555 3575811 3576125 - BolA family transcriptional regulator positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16555 YPZ3_RS16560 YPZ3_2781 YPZ3_RS16560 3576480 3577058 + hypothetical protein gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16560 YPZ3_RS16565 YPZ3_2782 ampG ampG 3577176 3578654 + AmpG family muropeptide MFS transporter in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16565 YPZ3_RS16570 YPZ3_2783 YPZ3_RS16570 3578946 3579713 + ion channel protein Tsx gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16570 YPZ3_RS16575 YPZ3_2784 YPZ3_RS16575 3580083 3581039 + cytochrome O ubiquinol oxidase gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16575 YPZ3_RS16580 YPZ3_2785 YPZ3_RS16580 3581044 3583035 + cytochrome O ubiquinol oxidase subunit I gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16580 YPZ3_RS16585 YPZ3_RS16585 YPZ3_RS16585 3583025 3583639 + cytochrome O ubiquinol oxidase gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16585 YPZ3_RS16590 YPZ3_2787 YPZ3_RS16590 3583639 3583971 + cytochrome O ubiquinol oxidase gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16590 YPZ3_RS16595 YPZ3_2788 YPZ3_RS16595 3583985 3584872 + protoheme IX farnesyltransferase converts protoheme IX and farnesyl diphosphate to heme O gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16595 YPZ3_RS16600 YPZ3_2789 YPZ3_RS16600 3585356 3586720 + membrane protein gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16600 YPZ3_RS16605 YPZ3_2790 YPZ3_RS16605 3586844 3587335 - nucleotide-binding protein nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16605 YPZ3_RS16610 YPZ3_RS16610 YPZ3_RS16610 3587567 3588478 + 2-dehydropantoate 2-reductase ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16610 YPZ3_RS16615 YPZ3_2792 YPZ3_RS16615 3588441 3589031 + oxidative-stress-resistance chaperone gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16615 YPZ3_RS16620 YPZ3_2793 YPZ3_RS16620 3589099 3590550 - tRNA sulfurtransferase catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16620 YPZ3_RS16625 YPZ3_RS16625 YPZ3_RS16625 3590648 3590818 - hypothetical protein gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16625 YPZ3_RS16630 YPZ3_RS16630 YPZ3_RS16630 3590900 3591154 + exodeoxyribonuclease 7 small subunit catalyzes the bidirectional exonucleolytic cleavage of DNA gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16630 YPZ3_RS16635 YPZ3_2794 YPZ3_RS16635 3591159 3592079 + geranyltranstransferase gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16635 YPZ3_RS16640 YPZ3_2795 YPZ3_RS16640 3592235 3594094 + 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16640 YPZ3_RS16645 YPZ3_2796 YPZ3_RS16645 3594273 3594731 - transposase gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16645 YPZ3_RS16650 YPZ3_RS16650 YPZ3_RS16650 3594721 3594885 - invasin gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16650 YPZ3_RS16655 YPZ3_2797 YPZ3_RS16655 3594945 3595430 - phosphatidylglycerophosphatase A hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16655 YPZ3_RS16660 YPZ3_2798 YPZ3_RS16660 3595423 3596412 - thiamine monophosphate kinase gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16660 YPZ3_RS16665 YPZ3_2799 nusB nusB 3596653 3597069 - N utilization substance protein B homolog Regulates rRNA biosynthesis by transcriptional antitermination gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16665 YPZ3_RS16670 YPZ3_2800 ribH ribH 3597090 3597560 - 6%2C7-dimethyl-8-ribityllumazine synthase RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16670 YPZ3_RS16675 YPZ3_2801 ribD ribD 3597696 3598805 - diaminohydroxyphosphoribosylaminopyrimidine deaminase riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16675 YPZ3_RS16680 YPZ3_2802 YPZ3_RS16680 3598955 3599404 - NrdR family transcriptional regulator gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16680 YPZ3_RS16685 YPZ3_2803 YPZ3_RS16685 3599475 3600068 - membrane protein gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16685 YPZ3_RS16690 YPZ3_2804 YPZ3_RS16690 3600101 3600796 - hypothetical protein gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16690 YPZ3_RS16695 YPZ3_2805 YPZ3_RS16695 3601094 3601603 - transposase gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16695 YPZ3_RS16700 YPZ3_2806 YPZ3_RS16700 3601759 3602727 - preprotein translocase subunit SecF gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16700 YPZ3_RS16705 YPZ3_2807 secD secD 3602738 3604552 - preprotein translocase subunit SecD part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16705 YPZ3_RS16710 YPZ3_2808 yajC yajC 3604613 3604948 - preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16710 YPZ3_RS16715 YPZ3_2809 tgt tgt 3605060 3606184 - queuine tRNA-ribosyltransferase Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr) gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16715 YPZ3_RS16720 YPZ3_2810 queA queA 3606277 3607347 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16720 YPZ3_RS16725 YPZ3_2811 YPZ3_RS16725 3607550 3608131 + ACP phosphodiesterase Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16725 YPZ3_RS16730 YPZ3_2812 YPZ3_RS16730 3608430 3609032 + peroxiredoxin gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16730 YPZ3_RS16735 YPZ3_2813 YPZ3_RS16735 3609247 3609705 + transposase gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16735 YPZ3_RS16740 YPZ3_RS16740 YPZ3_RS16740 3609833 3609964 - hypothetical protein gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16740 YPZ3_RS16745 YPZ3_RS16745 YPZ3_RS16745 3610133 3610387 + gamma-glutamyltranspeptidase gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16745 YPZ3_RS16750 YPZ3_2814 YPZ3_RS16750 3610384 3611898 + gamma-glutamyltransferase gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16750 YPZ3_RS16755 YPZ3_2815 YPZ3_RS16755 3612106 3612786 - short-chain dehydrogenase gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16755 YPZ3_RS16760 YPZ3_2816 YPZ3_RS16760 3612941 3614770 - maltodextrin glucosidase gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16760 YPZ3_RS16765 YPZ3_2817 proY proY 3615331 3616722 - permease cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16765 YPZ3_RS16770 YPZ3_2818 YPZ3_RS16770 3616798 3618117 - branched-chain amino acid transporter 2 carrier protein BrnQ sodium:branched-chain amino acid symporter gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16770 YPZ3_RS16775 YPZ3_2819 YPZ3_RS16775 3618591 3619655 - phosphate ABC transporter substrate-binding protein gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16775 YPZ3_RS16780 YPZ3_2820 phoR phoR 3619677 3620993 - phosphate regulon sensor protein membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16780 YPZ3_RS16785 YPZ3_2821 YPZ3_RS16785 3621018 3621707 - two-component system response regulator two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16785 YPZ3_RS16790 YPZ3_RS16790 YPZ3_RS16790 3621737 3621856 - hypothetical protein gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16790 YPZ3_RS16795 YPZ3_2822 YPZ3_RS16795 3621975 3623219 + exonuclease SbcD with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16795 YPZ3_RS16800 YPZ3_2823 YPZ3_RS16800 3623216 3626905 + ATP-dependent dsDNA exonuclease gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16800 YPZ3_RS16805 YPZ3_2824 YPZ3_RS16805 3627507 3628421 - fructokinase catalyzes phosphorylation of fructose%3B cytosolic enzyme gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16805 YPZ3_RS16810 YPZ3_2825 YPZ3_RS16810 3628754 3629665 + recombination-associated protein RdgC Required for efficient pilin antigenic variation gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16810 YPZ3_RS16815 YPZ3_RS16815 YPZ3_RS16815 3629901 3630188 - hypothetical protein gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16815 YPZ3_RS16820 YPZ3_RS16820 YPZ3_RS16820 3630252 3630422 - membrane protein gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16820 YPZ3_RS16825 YPZ3_2826 YPZ3_RS16825 3630678 3631202 - shikimate kinase gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16825 YPZ3_RS16830 YPZ3_2827 YPZ3_RS16830 3631449 3632006 - methyltransferase gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16830 YPZ3_RS16835 YPZ3_RS16835 YPZ3_RS16835 3632274 3632489 + hypothetical protein gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16835 YPZ3_RS16840 YPZ3_2828 YPZ3_RS16840 3632736 3633299 - SAM-dependent methyltransferase gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16840 YPZ3_RS16845 YPZ3_RS16845 YPZ3_RS16845 3633503 3633757 - membrane protein gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16845 YPZ3_RS16850 YPZ3_2829 YPZ3_RS16850 3633955 3634704 - flagellar brake protein YcgR gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16850 YPZ3_RS16855 YPZ3_2830 YPZ3_RS16855 3635041 3636300 - gamma-glutamyl phosphate reductase gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16855 YPZ3_RS16860 YPZ3_2831 YPZ3_RS16860 3636310 3637413 - glutamate 5-kinase gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16860 YPZ3_RS16865 YPZ3_2832 YPZ3_RS16865 3637590 3637991 - sigma factor-binding protein Crl gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16865 YPZ3_RS16870 YPZ3_2833 frsA frsA 3638051 3639298 - fermentation/respiration switch protein forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16870 YPZ3_RS16875 YPZ3_2834 YPZ3_RS16875 3639425 3639883 - xanthine phosphoribosyltransferase catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16875 YPZ3_RS16880 YPZ3_RS16880 YPZ3_RS16880 3640310 3640615 + holin gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16880 YPZ3_RS16885 YPZ3_2835 YPZ3_RS16885 3640812 3642416 + chitin-binding domain protein gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16885 YPZ3_RS16890 YPZ3_2836 YPZ3_RS16890 3642876 3643661 - LysR family transcriptional regulator gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16890 YPZ3_RS16895 YPZ3_RS16895 YPZ3_RS16895 3644509 3644664 - hypothetical protein gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16895 YPZ3_RS16900 YPZ3_2837 YPZ3_RS16900 3645662 3647122 + aminoacyl-histidine dipeptidase catalyzes the hydrolysis of Xaa-His dipeptides gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16900 YPZ3_RS16905 YPZ3_2838 YPZ3_RS16905 3647236 3648294 - DNA polymerase IV involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16905 YPZ3_RS16910 YPZ3_2839 YPZ3_RS16910 3648650 3649597 + glycerophosphoryl diester phosphodiesterase gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16910 YPZ3_RS16915 YPZ3_RS16915 YPZ3_RS16915 3649841 3650068 - hypothetical protein gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16915 YPZ3_RS16920 YPZ3_2840 YPZ3_RS16920 3650081 3651076 - thiamine biosynthesis lipoprotein ApbE gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16920 YPZ3_RS16925 YPZ3_2841 YPZ3_RS16925 3651144 3652367 - Na+-translocating NADH-quinone reductase subunit F uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16925 YPZ3_RS16930 YPZ3_2842 YPZ3_RS16930 3652383 3652979 - Na+-translocating NADH-quinone reductase subunit E Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol. gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16930 YPZ3_RS16935 YPZ3_2843 YPZ3_RS16935 3652986 3653615 - NADH-quinone reductase subunit D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16935 YPZ3_RS16940 YPZ3_2844 YPZ3_RS16940 3653608 3654408 - Na+-translocating NADH-quinone reductase subunit C uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16940 YPZ3_RS16945 YPZ3_2845 YPZ3_RS16945 3654398 3655639 - Na+-translocating NADH-quinone reductase subunit B uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16945 YPZ3_RS16950 YPZ3_2846 YPZ3_RS16950 3655643 3656986 - Na+-translocating NADH-quinone reductase subunit A uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16950 YPZ3_RS16955 YPZ3_2847 YPZ3_RS16955 3657482 3658222 + transpeptidase gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16955 YPZ3_RS16960 YPZ3_2848 YPZ3_RS16960 3658187 3658960 - glutamine amidotransferase gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16960 YPZ3_RS16965 YPZ3_2849 gmhA gmhA 3659163 3659744 - phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16965 YPZ3_RS16970 YPZ3_2850 fadE fadE 3659984 3662431 + acyl-CoA dehydrogenase functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16970 YPZ3_RS16975 YPZ3_2851 YPZ3_RS16975 3662603 3663349 - transcriptional regulator gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16975 YPZ3_RS16980 YPZ3_2852 YPZ3_RS16980 3663351 3665204 - glycosyltransferase gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16980 YPZ3_RS16985 YPZ3_2853 YPZ3_RS16985 3665359 3671091 - adhesin gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16985 YPZ3_RS16990 YPZ3_2854 YPZ3_RS16990 3671132 3672922 - hemolysin secretion protein ShlB gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16990 YPZ3_RS16995 YPZ3_2855 YPZ3_RS16995 3674011 3675303 - allantoate amidohydrolase gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS16995 YPZ3_RS17000 YPZ3_2856 YPZ3_RS17000 3675303 3675761 - aminotransferase V gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17000 YPZ3_RS17005 YPZ3_2857 YPZ3_RS17005 3675831 3676853 + transposase gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17005 YPZ3_RS17010 YPZ3_2858 YPZ3_RS17010 3676853 3677632 + transposase gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17010 YPZ3_RS17015 YPZ3_2859 YPZ3_RS17015 3677683 3678606 - purine catabolism protein PucG gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17015 YPZ3_RS17020 YPZ3_2860 YPZ3_RS17020 3678638 3679384 - amino acid ABC transporter ATP-binding protein gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17020 YPZ3_RS17025 YPZ3_2861 YPZ3_RS17025 3679365 3680018 - amino acid ABC transporter permease gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17025 YPZ3_RS17030 YPZ3_2862 YPZ3_RS17030 3680015 3680683 - polar amino acid ABC transporter permease gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17030 YPZ3_RS17035 YPZ3_2863 YPZ3_RS17035 3680696 3681484 - amino acid ABC transporter substrate-binding protein gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17035 YPZ3_RS17040 YPZ3_RS17040 YPZ3_RS17040 3681595 3681810 - membrane protein gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17040 YPZ3_RS17045 YPZ3_2864 YPZ3_RS17045 3681812 3682645 - RpiR family transcriptional regulator gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17045 YPZ3_RS17050 YPZ3_RS17050 YPZ3_RS17050 3682955 3683158 + hypothetical protein gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17050 YPZ3_RS17055 YPZ3_2865 YPZ3_RS17055 3683155 3684552 + amidase catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17055 YPZ3_RS17060 YPZ3_2866 YPZ3_RS17060 3684662 3685048 + hypothetical protein gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17060 YPZ3_RS17065 YPZ3_2867 YPZ3_RS17065 3685276 3686475 + sugar transporter gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17065 YPZ3_RS17070 YPZ3_2868 YPZ3_RS17070 3686635 3687408 + amino acid transporter gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17070 YPZ3_RS17075 YPZ3_2869 YPZ3_RS17075 3687405 3687746 + branched-chain amino acid ABC transporter permease gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17075 YPZ3_RS17080 YPZ3_2870 YPZ3_RS17080 3687918 3688430 + transcriptional regulator DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17080 YPZ3_RS17085 YPZ3_2871 YPZ3_RS17085 3688814 3689986 + multidrug resistance protein A with ErmA and TolC forms a multidrug efflux system gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17085 YPZ3_RS17090 YPZ3_2872 emrB emrB 3690025 3691560 + multidrug effux MFS transporter subunit EmrB multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17090 YPZ3_RS17095 YPZ3_2873 YPZ3_RS17095 3691683 3692849 - methyltransferase gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17095 YPZ3_RS17100 YPZ3_2874 YPZ3_RS17100 3693101 3693538 + thioredoxin gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17100 YPZ3_RS17105 YPZ3_2875 YPZ3_RS17105 3693708 3694457 + hypothetical protein gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17105 YPZ3_RS17110 YPZ3_2876 YPZ3_RS17110 3694500 3697142 + acetyltransferase catalyzes the acetylation of lysine gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17110 YPZ3_RS17115 YPZ3_2877 pssA pssA 3697318 3698673 + phosphatidylserine synthase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17115 YPZ3_RS17120 YPZ3_2878 YPZ3_RS17120 3698735 3699076 + lipoprotein required for high salt suppression of motility gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17120 YPZ3_RS17125 YPZ3_RS17125 YPZ3_RS17125 3699185 3699376 - hypothetical protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17125 YPZ3_RS17130 YPZ3_r8 YPZ3_RS17130 3699464 3699579 - 5S ribosomal RNA rRNA gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17130 YPZ3_RS17135 YPZ3_r9 YPZ3_RS17135 3699671 3702604 - 23S ribosomal RNA rRNA gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17135 YPZ3_RS17140 YPZ3_t44 YPZ3_RS17140 3702848 3702923 - tRNA-Glu tRNA gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17140 YPZ3_RS17145 YPZ3_r10 YPZ3_RS17145 3703057 3704605 - 16S ribosomal RNA rRNA gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17145 YPZ3_RS17155 YPZ3_2880 YPZ3_RS17155 3705119 3707692 - chaperone protein ClpB gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17155 YPZ3_RS17160 YPZ3_2881 YPZ3_RS17160 3707822 3708553 - membrane protein gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17160 YPZ3_RS17165 YPZ3_2882 rluD rluD 3708555 3709532 - ribosomal large subunit pseudouridine synthase D responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17165 YPZ3_RS17170 YPZ3_2883 YPZ3_RS17170 3709668 3710399 + outer membrane biogenesis protein BamD gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17170 YPZ3_RS17175 YPZ3_2884 YPZ3_RS17175 3710754 3711116 + cold-shock protein associated with 30S ribosomal subunit%3B interferes with translation elongation gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17175 YPZ3_RS17180 YPZ3_2885 YPZ3_RS17180 3711447 3711905 - transposase gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17180 YPZ3_RS17185 YPZ3_RS17185 YPZ3_RS17185 3711895 3712053 - invasin gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17185 YPZ3_RS17190 YPZ3_2886 pheA pheA 3712188 3712983 + chorismate mutase catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17190 YPZ3_RS17195 YPZ3_2887 YPZ3_RS17195 3713032 3714054 + transposase gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17195 YPZ3_RS17200 YPZ3_2888 YPZ3_RS17200 3714054 3714833 + transposase gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17200 YPZ3_RS17205 YPZ3_2889 pheA pheA 3714885 3715304 + chorismate mutase catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17205 YPZ3_RS17210 YPZ3_2890 tyrA tyrA 3715409 3716530 - chorismate mutase catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17210 YPZ3_RS17215 YPZ3_2891 YPZ3_RS17215 3716543 3717613 - phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17215 YPZ3_RS17220 YPZ3_2892 YPZ3_RS17220 3717846 3718562 + two-component system response regulator gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17220 YPZ3_RS17225 YPZ3_2893 YPZ3_RS17225 3719054 3719671 + C4-dicarboxylate ABC transporter gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17225 YPZ3_RS17230 YPZ3_2894 YPZ3_RS17230 3719740 3720051 + C4-dicarboxylate ABC transporter gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17230 YPZ3_RS17235 YPZ3_RS17235 YPZ3_RS17235 3720039 3720335 + C4-dicarboxylate ABC transporter gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17235 YPZ3_RS17240 YPZ3_2895 YPZ3_RS17240 3720658 3721425 + hypothetical protein gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17240 YPZ3_RS17245 YPZ3_2896 YPZ3_RS17245 3721728 3722237 - transposase gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17245 YPZ3_RS17250 YPZ3_RS17250 YPZ3_RS17250 3722176 3722331 - invasin gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17250 YPZ3_RS17255 YPZ3_2897 YPZ3_RS17255 3722398 3722745 - 50S ribosomal protein L19 gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17255 YPZ3_RS17260 YPZ3_RS17260 trmD trmD 3722826 3723566 - tRNA (guanine-N(1)-)-methyltransferase methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17260 YPZ3_RS17265 YPZ3_2899 rimM rimM 3723605 3724153 - ribosome maturation factor RimM Essential for efficient processing of 16S rRNA gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17265 YPZ3_RS17270 YPZ3_RS17270 rpsP rpsP 3724175 3724423 - 30S ribosomal protein S16 binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17270 YPZ3_RS17275 YPZ3_2900 YPZ3_RS17275 3724651 3726012 - signal recognition particle protein gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17275 YPZ3_RS17280 YPZ3_2901 YPZ3_RS17280 3726178 3726969 + membrane protein gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17280 YPZ3_RS17285 YPZ3_2902 YPZ3_RS17285 3727038 3728321 + membrane protein gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17285 YPZ3_RS17290 YPZ3_2903 YPZ3_RS17290 3728459 3728917 - transposase gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17290 YPZ3_RS17295 YPZ3_RS17295 YPZ3_RS17295 3728907 3729080 - transposase gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17295 YPZ3_RS17300 YPZ3_2904 YPZ3_RS17300 3729121 3729636 - S-ribosylhomocysteine lyase catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17300 YPZ3_RS17305 YPZ3_2905 YPZ3_RS17305 3729804 3731363 - glutamate--cysteine ligase involved in the first step of glutathione biosynthesis gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17305 YPZ3_RS17310 YPZ3_2906 YPZ3_RS17310 3731446 3731874 - membrane protein gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17310 YPZ3_RS17315 YPZ3_2907 YPZ3_RS17315 3731871 3732437 - fructose-1-P/6-phosphogluconate phosphatase YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17315 YPZ3_RS17320 YPZ3_t45 YPZ3_RS17320 3733032 3733108 - tRNA-Arg tRNA gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17320 YPZ3_RS17325 YPZ3_t46 YPZ3_RS17325 3733188 3733264 - tRNA-Arg tRNA gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17325 YPZ3_RS17330 YPZ3_t47 YPZ3_RS17330 3733322 3733398 - tRNA-Arg tRNA gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17330 YPZ3_RS17335 YPZ3_t48 YPZ3_RS17335 3733407 3733499 - tRNA-Ser tRNA gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17335 YPZ3_RS17340 YPZ3_RS17340 YPZ3_RS17340 3733862 3734047 - carbon storage regulator homolog affects carbohydrate metabolism%3B has regulatory role in many processes gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17340 YPZ3_RS17345 YPZ3_2908 YPZ3_RS17345 3734297 3736924 - alanine--tRNA ligase gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17345 YPZ3_RS17350 YPZ3_2909 YPZ3_RS17350 3737064 3737627 - regulatory protein RecX gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17350 YPZ3_RS17355 YPZ3_2910 recA recA 3737765 3738835 - protein RecA catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17355 YPZ3_RS17360 YPZ3_2911 YPZ3_RS17360 3738950 3739438 - hypothetical protein gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17360 YPZ3_RS17365 YPZ3_2912 YPZ3_RS17365 3739755 3741095 + MFS transporter gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17365 YPZ3_RS17370 YPZ3_2913 YPZ3_RS17370 3741343 3742287 + DNA-binding transcriptional regulator gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17370 YPZ3_RS17375 YPZ3_2914 YPZ3_RS17375 3742509 3743933 - fucose isomerase gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17375 YPZ3_RS17380 YPZ3_2915 YPZ3_RS17380 3743954 3745441 - glycerol kinase gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17380 YPZ3_RS17385 YPZ3_2916 YPZ3_RS17385 3745444 3746388 - transketolase gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17385 YPZ3_RS17390 YPZ3_2917 YPZ3_RS17390 3746381 3747211 - transketolase gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17390 YPZ3_RS17395 YPZ3_2918 YPZ3_RS17395 3747467 3748609 - sugar ABC transporter permease gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17395 YPZ3_RS17400 YPZ3_2919 YPZ3_RS17400 3748609 3750132 - sugar ABC transporter ATP-binding protein gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17400 YPZ3_RS17405 YPZ3_2920 YPZ3_RS17405 3750132 3750749 - lipoprotein gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17405 YPZ3_RS17410 YPZ3_2921 YPZ3_RS17410 3750842 3751783 - sugar ABC transporter substrate-binding protein gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17410 YPZ3_RS17415 YPZ3_2922 YPZ3_RS17415 3752319 3754532 + catalase-peroxidase gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17415 YPZ3_RS17420 YPZ3_RS17420 YPZ3_RS17420 3754609 3754992 + soluble cytochrome b562 1 electron transport protein gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17420 YPZ3_RS17425 YPZ3_RS17425 YPZ3_RS17425 3755140 3755670 + cytochrome b561 B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17425 YPZ3_RS17430 YPZ3_2924 YPZ3_RS17430 3755927 3756637 - twin-argninine leader-binding protein DmsD binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17430 YPZ3_RS17435 YPZ3_2925 YPZ3_RS17435 3756783 3757643 - dimethyl sulfoxide reductase subunit C gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17435 YPZ3_RS17440 YPZ3_2926 YPZ3_RS17440 3757645 3758262 - 4Fe-4S ferredoxin oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17440 YPZ3_RS17445 YPZ3_2927 YPZ3_RS17445 3758274 3760724 - dimethyl sulfoxide reductase subunit A gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17445 YPZ3_RS17450 YPZ3_2928 araD araD 3761187 3761882 - L-ribulose-5-phosphate 4-epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17450 YPZ3_RS17455 YPZ3_2929 YPZ3_RS17455 3762585 3763394 + DeoR family transcriptional regulator gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17455 YPZ3_RS17460 YPZ3_2930 YPZ3_RS17460 3763555 3764559 + ABC transporter substrate-binding protein gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17460 YPZ3_RS17465 YPZ3_2931 YPZ3_RS17465 3764810 3765268 + transposase gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17465 YPZ3_RS17470 YPZ3_2932 YPZ3_RS17470 3765419 3766933 + sugar ABC transporter ATP-binding protein gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17470 YPZ3_RS17475 YPZ3_2933 YPZ3_RS17475 3766926 3767915 + sugar ABC transporter permease gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17475 YPZ3_RS17480 YPZ3_2934 YPZ3_RS17480 3767928 3768965 + sugar ABC transporter permease gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17480 YPZ3_RS17485 YPZ3_2935 YPZ3_RS17485 3769171 3770052 + L-xylulose 5-phosphate 3-epimerase L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17485 YPZ3_RS17490 YPZ3_2936 YPZ3_RS17490 3770063 3771559 + 3-keto-L-gulonate kinase gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17490 YPZ3_RS17495 YPZ3_2937 YPZ3_RS17495 3771957 3773600 + fumarate hydratase catalyzes the formation of malate from fumerate gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17495 YPZ3_RS17500 YPZ3_RS17500 YPZ3_RS17500 3773783 3774034 + hypothetical protein gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17500 YPZ3_RS17505 YPZ3_2938 YPZ3_RS17505 3774031 3774816 + methionine aminopeptidase type I gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17505 YPZ3_RS17510 YPZ3_RS17510 YPZ3_RS17510 3774826 3775011 - gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17510 YPZ3_RS17515 YPZ3_2939 YPZ3_RS17515 3775174 3776361 - enterotoxin gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17515 YPZ3_RS17520 YPZ3_2940 YPZ3_RS17520 3776794 3777261 - adhesin gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17520 YPZ3_RS17525 YPZ3_2941 YPZ3_RS17525 3777307 3778890 - glycosyl transferase gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17525 YPZ3_RS17530 YPZ3_RS17530 YPZ3_RS17530 3779063 3779314 + hypothetical protein gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17530 YPZ3_RS17535 YPZ3_2942 YPZ3_RS17535 3779551 3780930 + cytochrome C peroxidase gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17535 YPZ3_RS17540 YPZ3_2943 YPZ3_RS17540 3781001 3781765 + amino acid ABC transporter substrate-binding protein gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17540 YPZ3_RS17545 YPZ3_RS17545 YPZ3_RS17545 3782189 3782392 + hypothetical protein gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17545 YPZ3_RS17550 YPZ3_RS17550 YPZ3_RS17550 3782603 3782866 + hypothetical protein gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17550 YPZ3_RS17555 YPZ3_2944 YPZ3_RS17555 3783113 3783454 + ArsR family transcriptional regulator regulates the expression of of the arsRBC involved in resistance to arsenic gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17555 YPZ3_RS17560 YPZ3_2945 YPZ3_RS17560 3783539 3784828 + arylsulfatase gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17560 YPZ3_RS17565 YPZ3_RS17565 YPZ3_RS17565 3785383 3786355 + transcriptional regulator gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17565 YPZ3_RS17570 YPZ3_2948 YPZ3_RS17570 3786476 3787150 - dihydroxyacetone kinase gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17570 YPZ3_RS17575 YPZ3_2949 YPZ3_RS17575 3787157 3788158 - dihydroxyacetone kinase with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17575 YPZ3_RS17580 YPZ3_2950 YPZ3_RS17580 3788245 3789015 - short-chain dehydrogenase gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17580 YPZ3_RS17585 YPZ3_2951 YPZ3_RS17585 3789079 3790194 - iditol 2-dehydrogenase gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17585 YPZ3_RS17590 YPZ3_2952 YPZ3_RS17590 3790677 3791132 + ribose 5-phosphate isomerase gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17590 YPZ3_RS17595 YPZ3_RS17595 YPZ3_RS17595 3791295 3791429 - hypothetical protein gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17595 YPZ3_RS17600 YPZ3_2953 YPZ3_RS17600 3791926 3794481 + DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17600 YPZ3_RS17605 YPZ3_2954 YPZ3_RS17605 3794841 3795839 - RNA polymerase sigma factor RpoS sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17605 YPZ3_RS17610 YPZ3_2955 YPZ3_RS17610 3795894 3796877 - lipoprotein nlpD gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17610 YPZ3_RS17615 YPZ3_2956 pcm pcm 3796999 3797625 - protein-L-isoaspartate O-methyltransferase catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17615 YPZ3_RS17620 YPZ3_2957 surE surE 3797619 3798383 - 5'/3'-nucleotidase SurE broad specificity 5'(3')-nucleotidase and polyphosphatase gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17620 YPZ3_RS17625 YPZ3_2958 truD truD 3798361 3799410 - tRNA pseudouridine synthase D catalyzes the modification of U13 in tRNA(Glu) gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17625 YPZ3_RS17630 YPZ3_2959 ispF ispF 3799421 3799909 - 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17630 YPZ3_RS17635 YPZ3_2960 YPZ3_RS17635 3800048 3800773 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17635 YPZ3_RS17640 YPZ3_2961 YPZ3_RS17640 3800777 3801097 - cell division protein FtsB gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17640 YPZ3_RS17645 YPZ3_2962 YPZ3_RS17645 3801411 3801728 - membrane protein gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17645 YPZ3_RS17650 YPZ3_2963 YPZ3_RS17650 3801919 3802560 - adenylyl-sulfate kinase converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17650 YPZ3_RS17655 YPZ3_2964 cysN cysN 3802562 3803998 - sulfate adenylyltransferase subunit 1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17655 YPZ3_RS17660 YPZ3_2965 YPZ3_RS17660 3804091 3804999 - sulfate adenylyltransferase subunit 2 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17660 YPZ3_RS17665 YPZ3_2966 YPZ3_RS17665 3805010 3806428 - sirohydrochlorin ferrochelatase gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17665 YPZ3_RS17670 YPZ3_RS17670 YPZ3_RS17670 3806729 3806926 - membrane protein gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17670 YPZ3_RS17675 YPZ3_RS17675 YPZ3_RS17675 3807019 3807219 + hypothetical protein gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17675 YPZ3_RS17680 YPZ3_2967 YPZ3_RS17680 3807394 3807801 + hypothetical protein gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17680 YPZ3_RS17685 YPZ3_RS17685 YPZ3_RS17685 3808044 3808770 - phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17685 YPZ3_RS17690 YPZ3_2969 YPZ3_RS17690 3808767 3810497 - sulfite reductase subunit beta hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17690 YPZ3_RS17695 YPZ3_2970 cysJ cysJ 3810497 3812317 - sulfite reductase subunit alpha catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17695 YPZ3_RS17700 YPZ3_2971 YPZ3_RS17700 3812710 3813069 + 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17700 YPZ3_RS17705 YPZ3_2972 YPZ3_RS17705 3813303 3813974 - 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17705 YPZ3_RS17710 YPZ3_2973 YPZ3_RS17710 3814078 3814683 - superoxide dismutase gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17710 YPZ3_RS17715 YPZ3_2974 eno eno 3815046 3816341 - enolase catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17715 YPZ3_RS17720 YPZ3_2975 pyrG pyrG 3816422 3818059 - CTP synthase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17720 YPZ3_RS17725 YPZ3_2976 mazG mazG 3818271 3819113 - nucleoside triphosphate pyrophosphohydrolase functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17725 YPZ3_RS17730 YPZ3_RS17730 YPZ3_RS17730 3819120 3819278 - hypothetical protein gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17730 YPZ3_RS17735 YPZ3_2977 relA relA 3819315 3821549 - GTP pyrophosphokinase (p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17735 YPZ3_RS17740 YPZ3_2978 YPZ3_RS17740 3821993 3824785 + sensor histidine kinase part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17740 YPZ3_RS17745 YPZ3_2979 YPZ3_RS17745 3824960 3826405 - serine endoprotease protease Do%3B required at high temperature%3B degrades damaged proteins gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17745 YPZ3_RS17750 YPZ3_2980 YPZ3_RS17750 3826603 3828123 - deoxyguanosinetriphosphate triphosphohydrolase gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17750 YPZ3_RS17755 YPZ3_2981 YPZ3_RS17755 3828417 3829118 + 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17755 YPZ3_RS17760 YPZ3_2982 YPZ3_RS17760 3829118 3829960 + vitamin B12-binding protein gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17760 YPZ3_RS17765 YPZ3_2983 YPZ3_RS17765 3829960 3830574 + hypothetical protein gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17765 YPZ3_RS17770 YPZ3_2984 YPZ3_RS17770 3830859 3831203 - iron-sulfur cluster insertion protein ErpA essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17770 YPZ3_RS17775 YPZ3_2985 YPZ3_RS17775 3831339 3832775 - H+/Cl- exchange transporter ClcA gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17775 YPZ3_RS17780 YPZ3_2986 YPZ3_RS17780 3833156 3834436 + glutamate-1-semialdehyde 2%2C1-aminomutase Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17780 YPZ3_RS17785 YPZ3_2987 YPZ3_RS17785 3834810 3836807 - iron-hydroxamate transporter permease subunit gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17785 YPZ3_RS17790 YPZ3_2988 YPZ3_RS17790 3836804 3837715 - iron-hydroxamate transporter substrate-binding subunit gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17790 YPZ3_RS17795 YPZ3_RS17795 YPZ3_RS17795 3837709 3837936 + hypothetical protein gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17795 YPZ3_RS17800 YPZ3_2989 YPZ3_RS17800 3837892 3838686 - iron-hydroxamate transporter ATP-binding protein part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17800 YPZ3_RS17805 YPZ3_2990 mrcB mrcB 3839008 3841482 - bifunctional glycosyl transferase/transpeptidase penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17805 YPZ3_RS17810 YPZ3_2991 YPZ3_RS17810 3841591 3844152 - RNA helicase similar in sequence to the ATP-dependent RNA helicase HrpA gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17810 YPZ3_RS17815 YPZ3_2992 YPZ3_RS17815 3844193 3844768 + 2'-5' RNA ligase gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17815 YPZ3_RS17820 YPZ3_2993 YPZ3_RS17820 3844881 3845618 + sugar fermentation stimulation protein homolog gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17820 YPZ3_RS17825 YPZ3_RS17825 dksA dksA 3845788 3846243 + transcriptional regulator gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17825 YPZ3_RS17830 YPZ3_2995 YPZ3_RS17830 3846523 3847488 + glutamyl-Q tRNA(Asp) ligase gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17830 YPZ3_RS17835 YPZ3_2996 pcnB pcnB 3847631 3849052 + poly(A) polymerase I Polymerase that creates the 3' poly(A) tail found in some mRNA's gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17835 YPZ3_RS17840 YPZ3_2997 YPZ3_RS17840 3849060 3849539 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17840 YPZ3_RS17845 YPZ3_2998 panB panB 3849808 3850605 + 3-methyl-2-oxobutanoate hydroxymethyltransferase catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17845 YPZ3_RS17850 YPZ3_2999 panC panC 3850693 3851547 + pantothenate synthetase catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17850 YPZ3_RS17855 YPZ3_3000 YPZ3_RS17855 3851958 3852338 + aspartate 1-decarboxylase gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17855 YPZ3_RS17860 YPZ3_RS17860 YPZ3_RS17860 3852487 3853801 - hypothetical protein gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17860 YPZ3_RS17865 YPZ3_3002 YPZ3_RS17865 3854008 3854778 - membrane protein gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17865 YPZ3_RS17870 YPZ3_3003 YPZ3_RS17870 3854775 3855701 - ABC transporter ATP-binding protein gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17870 YPZ3_RS17875 YPZ3_RS17875 YPZ3_RS17875 3855937 3856599 + carbonic anhydrase catalyzes the interconversion of bicarbonate and carbon dioxide gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17875 YPZ3_RS17880 YPZ3_3005 YPZ3_RS17880 3856753 3857289 - hypoxanthine phosphoribosyltransferase catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17880 YPZ3_RS17885 YPZ3_3006 YPZ3_RS17885 3857509 3859110 - blue copper oxidase CueO laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17885 YPZ3_RS17890 YPZ3_3007 YPZ3_RS17890 3859427 3859774 + hypothetical protein gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17890 YPZ3_RS17895 YPZ3_3008 YPZ3_RS17895 3859891 3860781 + polyamine aminopropyltransferase gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17895 YPZ3_RS17900 YPZ3_3009 YPZ3_RS17900 3860859 3861653 + S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17900 YPZ3_RS17905 YPZ3_3010 YPZ3_RS17905 3862091 3862999 + aromatic amino acid exporter gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17905 YPZ3_RS17910 YPZ3_3011 YPZ3_RS17910 3863110 3863469 - hypothetical protein gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17910 YPZ3_RS17915 YPZ3_3012 YPZ3_RS17915 3863768 3866365 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17915 YPZ3_RS17920 YPZ3_3013 YPZ3_RS17920 3866935 3867393 - transposase gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17920 YPZ3_RS17925 YPZ3_RS17925 YPZ3_RS17925 3867383 3867538 - invasin gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17925 YPZ3_RS17930 YPZ3_3014 YPZ3_RS17930 3867636 3869060 - dihydrolipoamide dehydrogenase E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17930 YPZ3_RS17935 YPZ3_3015 aceF aceF 3869366 3870895 - dihydrolipoamide acetyltransferase E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17935 YPZ3_RS17940 YPZ3_3016 aceE aceE 3870909 3873572 - pyruvate dehydrogenase E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17940 YPZ3_RS17945 YPZ3_3017 pdhR pdhR 3873768 3874532 - transcriptional regulator activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17945 YPZ3_RS17950 YPZ3_3018 YPZ3_RS17950 3875396 3876793 + aromatic amino acid transporter gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17950 YPZ3_RS17955 YPZ3_3019 YPZ3_RS17955 3877211 3878065 - hypothetical protein involved in regulation of beta-lactamase%3B putative signaling protein gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17955 YPZ3_RS17960 YPZ3_3020 YPZ3_RS17960 3878355 3878906 - N-acetyl-anhydromuranmyl-L-alanine amidase gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17960 YPZ3_RS17965 YPZ3_3021 YPZ3_RS17965 3879019 3879927 + nicotinate-nucleotide pyrophosphorylase catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17965 YPZ3_RS17970 YPZ3_3022 YPZ3_RS17970 3880130 3880594 + major pilin subunit gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17970 YPZ3_RS17975 YPZ3_3023 YPZ3_RS17975 3880587 3882125 + transporter HofB gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17975 YPZ3_RS17980 YPZ3_3024 YPZ3_RS17980 3882122 3883321 + type II secretion protein F gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17980 YPZ3_RS17985 YPZ3_3025 YPZ3_RS17985 3883772 3884815 - GMP reductase catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17985 YPZ3_RS17990 YPZ3_RS17990 YPZ3_RS17990 3884901 3885101 + hypothetical protein gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17990 YPZ3_RS17995 YPZ3_3026 coaE coaE 3885111 3885731 + dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS17995 YPZ3_RS18000 YPZ3_3027 YPZ3_RS18000 3885728 3886480 + cell division protein ZapD gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18000 YPZ3_RS18005 YPZ3_RS18005 YPZ3_RS18005 3886666 3886872 + DNA gyrase inhibitor YacG inhibits supercoiling by DNA gyrase by binding to the GyrB subunit gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18005 YPZ3_RS18010 YPZ3_3028 YPZ3_RS18010 3887062 3887574 - transposase gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18010 YPZ3_RS18015 YPZ3_3029 YPZ3_RS18015 3887631 3888653 + transposase gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18015 YPZ3_RS18020 YPZ3_3030 YPZ3_RS18020 3888653 3889432 + transposase gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18020 YPZ3_RS18025 YPZ3_3031 YPZ3_RS18025 3889483 3890592 - histidine kinase gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18025 YPZ3_RS18030 YPZ3_3032 YPZ3_RS18030 3890585 3892495 - hypothetical protein gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18030 YPZ3_RS18035 YPZ3_3033 YPZ3_RS18035 3892649 3893908 - integrase gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18035 YPZ3_RS18040 YPZ3_t49 YPZ3_RS18040 3894107 3894191 - tRNA-Leu tRNA gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18040 YPZ3_RS18045 YPZ3_3034 YPZ3_RS18045 3894296 3895372 - LPS export ABC transporter permease LptG with LptABCF is involved in the transport of lipopolysaccharides gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18045 YPZ3_RS18050 YPZ3_3035 YPZ3_RS18050 3895372 3896466 - LPS export ABC transporter permease LptF with LptBGC is involved in lipopolysaccharide export gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18050 YPZ3_RS18055 YPZ3_3036 YPZ3_RS18055 3896746 3898257 + cytosol aminopeptidase catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18055 YPZ3_RS18060 YPZ3_3037 YPZ3_RS18060 3898408 3898857 + DNA polymerase III subunit chi binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18060 YPZ3_RS18065 YPZ3_3038 YPZ3_RS18065 3898870 3901767 + valine--tRNA ligase gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18065 YPZ3_RS18070 YPZ3_3039 YPZ3_RS18070 3901910 3902413 + acetyltransferase gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18070 YPZ3_RS18075 YPZ3_3040 YPZ3_RS18075 3902920 3903351 - RNase E inhibitor protein gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18075 YPZ3_RS18080 YPZ3_3041 YPZ3_RS18080 3903563 3904570 + ornithine carbamoyltransferase catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18080 YPZ3_RS18085 YPZ3_3042 YPZ3_RS18085 3904877 3905335 - hypothetical protein gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18085 YPZ3_RS18090 YPZ3_RS18090 YPZ3_RS18090 3905974 3907541 + ABC transporter substrate-binding protein gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18090 YPZ3_RS18095 YPZ3_3045 YPZ3_RS18095 3907637 3908686 + peptide ABC transporter permease gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18095 YPZ3_RS18100 YPZ3_3046 YPZ3_RS18100 3908705 3909541 + peptide ABC transporter permease gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18100 YPZ3_RS18105 YPZ3_3047 YPZ3_RS18105 3909534 3910412 + ABC transporter ATP-binding protein gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18105 YPZ3_RS18110 YPZ3_3048 YPZ3_RS18110 3910399 3911115 + peptide ABC transporter ATP-binding protein gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18110 YPZ3_RS18115 YPZ3_3049 YPZ3_RS18115 3911549 3913687 + ribonucleoside triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18115 YPZ3_RS18120 YPZ3_RS18120 YPZ3_RS18120 3913864 3914328 + anaerobic ribonucleoside-triphosphate reductase activating protein activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18120 YPZ3_RS18125 YPZ3_3051 YPZ3_RS18125 3914656 3915381 + phosphonate metabolism transcriptional regulator PhnF may be involved in phosphonate uptake and biodegradation gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18125 YPZ3_RS18130 YPZ3_3052 YPZ3_RS18130 3915382 3915858 + phosphonate metabolism protein PhnG gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18130 YPZ3_RS18135 YPZ3_3053 phnH phnH 3915858 3916484 + phosphonate C-P lyase system protein PhnH gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18135 YPZ3_RS18140 YPZ3_3054 YPZ3_RS18140 3916484 3917662 + carbon-phosphorus lyase complex subunit PhnI required for the use of phosphonate and phosphite gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18140 YPZ3_RS18145 YPZ3_3055 YPZ3_RS18145 3917655 3918536 + carbon-phosphorus lyase complex subunit PhnJ required for use of phosphonate and phosphite gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18145 YPZ3_RS18150 YPZ3_3056 phnK phnK 3918536 3919327 + phosphonate C-P lyase gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18150 YPZ3_RS18155 YPZ3_3057 YPZ3_RS18155 3919716 3920435 + phosphonate ABC transporter ATP-binding protein gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18155 YPZ3_RS18160 YPZ3_3058 YPZ3_RS18160 3920432 3921568 + phosphonate metabolism protein PhnM gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18160 YPZ3_RS18165 YPZ3_3059 YPZ3_RS18165 3921568 3922149 + ribose 1%2C5-bisphosphate phosphokinase PhnN gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18165 YPZ3_RS18170 YPZ3_3060 phnP phnP 3922140 3922892 + phosphonate metabolism protein PhnP required for the use of phosphonates and phosphite as phosphorus sources gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18170 YPZ3_RS18175 YPZ3_3061 YPZ3_RS18175 3922905 3923543 - hypothetical protein gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18175 YPZ3_RS18180 YPZ3_3062 YPZ3_RS18180 3923695 3924138 - hypothetical protein gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18180 YPZ3_RS18185 YPZ3_3063 YPZ3_RS18185 3924237 3925403 - alginate lyase gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18185 YPZ3_RS18190 YPZ3_3064 YPZ3_RS18190 3925418 3926512 - sugar ABC transporter ATP-binding protein gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18190 YPZ3_RS18195 YPZ3_3065 YPZ3_RS18195 3926524 3927363 - sugar ABC transporter permease gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18195 YPZ3_RS18200 YPZ3_3066 YPZ3_RS18200 3927382 3928266 - sugar ABC transporter permease gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18200 YPZ3_RS18205 YPZ3_3067 YPZ3_RS18205 3928274 3929587 - sugar ABC transporter substrate-binding protein gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18205 YPZ3_RS18210 YPZ3_3068 YPZ3_RS18210 3930148 3931371 + alginate lyase gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18210 YPZ3_RS18215 YPZ3_3069 YPZ3_RS18215 3931395 3933413 + alginate lyase gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18215 YPZ3_RS18220 YPZ3_RS18220 YPZ3_RS18220 3933644 3933931 + nuclease gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18220 YPZ3_RS18225 YPZ3_3070 YPZ3_RS18225 3934106 3934612 - acetyltransferase gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18225 YPZ3_RS18230 YPZ3_3071 YPZ3_RS18230 3934606 3935127 - SCP-2 sterol transfer family protein gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18230 YPZ3_RS18235 YPZ3_RS18235 YPZ3_RS18235 3935208 3935333 + hypothetical protein gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18235 YPZ3_RS18240 YPZ3_3072 YPZ3_RS18240 3935443 3936438 + protease gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18240 YPZ3_RS18245 YPZ3_3073 YPZ3_RS18245 3936450 3937328 + protease gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18245 YPZ3_RS18250 YPZ3_3074 YPZ3_RS18250 3937469 3938875 - multidrug transporter gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18250 YPZ3_RS18255 YPZ3_3075 YPZ3_RS18255 3938877 3942002 - multidrug efflux RND transporter permease subunit gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18255 YPZ3_RS18260 YPZ3_3076 YPZ3_RS18260 3942006 3943166 - acriflavine resistance protein E gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18260 YPZ3_RS18265 YPZ3_3077 YPZ3_RS18265 3943674 3944729 + hypothetical protein gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18265 YPZ3_RS18270 YPZ3_3078 YPZ3_RS18270 3944984 3945295 - transcriptional regulator gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18270 YPZ3_RS18275 YPZ3_RS18275 YPZ3_RS18275 3945319 3945687 - hypothetical protein gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18275 YPZ3_RS18280 YPZ3_RS18280 YPZ3_RS18280 3945730 3945903 - membrane protein gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18280 YPZ3_RS18285 YPZ3_3079 YPZ3_RS18285 3945923 3947917 - DEAD/DEAH box family ATP-dependent RNA helicase participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18285 YPZ3_RS18290 YPZ3_3080 YPZ3_RS18290 3948104 3948988 - lipoprotein NlpI lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18290 YPZ3_RS18295 YPZ3_3081 YPZ3_RS18295 3949113 3951230 - polyribonucleotide nucleotidyltransferase gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18295 YPZ3_RS18300 YPZ3_3082 YPZ3_RS18300 3951497 3952282 - integrase gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18300 YPZ3_RS18305 YPZ3_3083 YPZ3_RS18305 3952336 3952851 - transposase gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18305 YPZ3_RS18310 YPZ3_3084 YPZ3_RS18310 3952902 3953645 + type VI secretion protein ImpG gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18310 YPZ3_RS18315 YPZ3_3085 YPZ3_RS18315 3953609 3954697 + type VI secretion protein gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18315 YPZ3_RS18320 YPZ3_3086 YPZ3_RS18320 3954823 3956139 + phosphopeptide-binding protein gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18320 YPZ3_RS18325 YPZ3_3087 YPZ3_RS18325 3956139 3956684 + lipoprotein gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18325 YPZ3_RS18330 YPZ3_3088 YPZ3_RS18330 3956687 3958033 + hypothetical protein gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18330 YPZ3_RS18335 YPZ3_3089 YPZ3_RS18335 3958048 3958800 + chemotaxis protein MotB gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18335 YPZ3_RS18340 YPZ3_3090 YPZ3_RS18340 3958811 3961414 + ATP-dependent Clp protease ClpV gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18340 YPZ3_RS18345 YPZ3_3091 YPZ3_RS18345 3961411 3962208 + Fis family transcriptional regulator gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18345 YPZ3_RS18350 YPZ3_3092 YPZ3_RS18350 3962205 3962891 + type VI secretion protein gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18350 YPZ3_RS18355 YPZ3_3093 YPZ3_RS18355 3962897 3964285 + membrane protein gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18355 YPZ3_RS18360 YPZ3_3094 YPZ3_RS18360 3964317 3967850 + type VI secretion protein IcmF gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18360 YPZ3_RS18365 YPZ3_3095 YPZ3_RS18365 3967975 3968757 + membrane protein gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18365 YPZ3_RS18370 YPZ3_3096 YPZ3_RS18370 3968754 3969287 + membrane protein gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18370 YPZ3_RS18375 YPZ3_3097 YPZ3_RS18375 3969309 3971711 + type VI secretion protein Vgr gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18375 YPZ3_RS18380 YPZ3_3098 YPZ3_RS18380 3971717 3972175 + hypothetical protein gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18380 YPZ3_RS18385 YPZ3_3099 YPZ3_RS18385 3972168 3975032 + hypothetical protein gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18385 YPZ3_RS18390 YPZ3_3100 YPZ3_RS18390 3975060 3976430 + type IV secretion protein Rhs gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18390 YPZ3_RS18395 YPZ3_3101 YPZ3_RS18395 3976432 3976917 + hypothetical protein gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18395 YPZ3_RS18400 YPZ3_RS18400 YPZ3_RS18400 3976967 3977110 - hypothetical protein gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18400 YPZ3_RS18405 YPZ3_RS18405 YPZ3_RS18405 3977234 3977458 - hypothetical protein gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18405 YPZ3_RS18410 YPZ3_3102 YPZ3_RS18410 3977540 3977947 - transcriptional regulator gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18410 YPZ3_RS18420 YPZ3_3103 YPZ3_RS18420 3978308 3980506 + type VI secretion protein Vgr gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18420 YPZ3_RS18425 YPZ3_3104 YPZ3_RS18425 3980509 3980931 + hypothetical protein gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18425 YPZ3_RS18430 YPZ3_3105 YPZ3_RS18430 3980976 3985514 + hypothetical protein gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18430 YPZ3_RS18435 YPZ3_3106 YPZ3_RS18435 3985523 3986317 + hypothetical protein gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18435 YPZ3_RS18440 YPZ3_3107 YPZ3_RS18440 3986664 3987563 - xylose isomerase gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18440 YPZ3_RS18445 YPZ3_3108 YPZ3_RS18445 3987560 3988690 - oxidoreductase gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18445 YPZ3_RS18450 YPZ3_3109 YPZ3_RS18450 3988960 3989826 + AraC family transcriptional regulator gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18450 YPZ3_RS18455 YPZ3_3110 YPZ3_RS18455 3989988 3990491 - carbohydrate transporter gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18455 YPZ3_RS18460 YPZ3_3111 YPZ3_RS18460 3990497 3991426 - carbohydrate kinase gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18460 YPZ3_RS18465 YPZ3_3112 YPZ3_RS18465 3991583 3992284 - deoxyribose-phosphate aldolase gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18465 YPZ3_RS18470 YPZ3_3113 YPZ3_RS18470 3992755 3993336 + FMN reductase gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18470 YPZ3_RS18475 YPZ3_3114 YPZ3_RS18475 3993351 3994487 + sulfonate ABC transporter substrate-binding protein gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18475 YPZ3_RS18480 YPZ3_3115 YPZ3_RS18480 3994506 3995654 + alkanesulfonate monooxygenase catalyzes the release of sulfite from alkanesulfonates gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18480 YPZ3_RS18485 YPZ3_3116 ssuC ssuC 3995666 3996460 + sulfonate ABC transporter part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18485 YPZ3_RS18490 YPZ3_3117 ssuB ssuB 3996457 3997272 + aliphatic sulfonate ABC transporter ATP-binding protein part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18490 YPZ3_RS18495 YPZ3_RS18495 YPZ3_RS18495 3997891 3998094 - DNA-damage-inducible protein J gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18495 YPZ3_RS18500 YPZ3_3118 YPZ3_RS18500 3998548 3999903 + xanthine/uracil permease gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18500 YPZ3_RS18505 YPZ3_3119 YPZ3_RS18505 4000252 4001901 + sodium:proton antiporter gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18505 YPZ3_RS18510 YPZ3_3120 YPZ3_RS18510 4002119 4003306 - hypothetical protein gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18510 YPZ3_RS18515 YPZ3_3121 YPZ3_RS18515 4003458 4004378 - lipid A biosynthesis palmitoleoyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18515 YPZ3_RS18520 YPZ3_3122 YPZ3_RS18520 4005172 4006161 + LacI family transcriptional regulator gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18520 YPZ3_RS18525 YPZ3_3123 YPZ3_RS18525 4006365 4007861 + ABC transporter ATP-binding protein gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18525 YPZ3_RS18530 YPZ3_3124 YPZ3_RS18530 4007854 4008843 + sugar ABC transporter permease gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18530 YPZ3_RS18535 YPZ3_3125 YPZ3_RS18535 4008845 4009798 + ABC transporter permease gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18535 YPZ3_RS18540 YPZ3_3126 YPZ3_RS18540 4009817 4011454 + ribulokinase gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18540 YPZ3_RS18545 YPZ3_3127 YPZ3_RS18545 4011451 4012056 + phosphosugar isomerase gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18545 YPZ3_RS18550 YPZ3_3128 YPZ3_RS18550 4012246 4013097 - S-transferase YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18550 YPZ3_RS18555 YPZ3_3129 YPZ3_RS18555 4013351 4014697 + hypothetical protein gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18555 YPZ3_RS18560 YPZ3_3130 YPZ3_RS18560 4014804 4015979 - DNA repair ATPase gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18560 YPZ3_RS18565 YPZ3_RS18565 YPZ3_RS18565 4016218 4016394 + transposase gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18565 YPZ3_RS18570 YPZ3_3131 YPZ3_RS18570 4016384 4016842 + transposase gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18570 YPZ3_RS18575 YPZ3_RS18575 YPZ3_RS18575 4017025 4017237 - cold-shock protein gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18575 YPZ3_RS18580 YPZ3_RS18580 YPZ3_RS18580 4017497 4017709 - cold-shock protein gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18580 YPZ3_RS18585 YPZ3_RS18585 YPZ3_RS18585 4017802 4017951 - hypothetical protein gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18585 YPZ3_RS18590 YPZ3_3132 YPZ3_RS18590 4018242 4018709 - hypothetical protein gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18590 YPZ3_RS18595 YPZ3_3133 YPZ3_RS18595 4019185 4019997 + MBL fold hydrolase gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18595 YPZ3_RS18600 YPZ3_3134 YPZ3_RS18600 4020062 4020952 + 2-hydroxy-3-oxopropionate reductase gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18600 YPZ3_RS18605 YPZ3_3135 YPZ3_RS18605 4021130 4021525 + gamma carboxymuconolactone decarboxylase gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18605 YPZ3_RS18610 YPZ3_3136 YPZ3_RS18610 4021679 4023043 + MFS transporter gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18610 YPZ3_RS18615 YPZ3_3137 YPZ3_RS18615 4023133 4023795 + GntR family transcriptional regulator gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18615 YPZ3_RS18620 YPZ3_3138 YPZ3_RS18620 4023861 4024337 + hypothetical protein gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18620 YPZ3_RS18625 YPZ3_RS18625 fis fis 4025091 4025387 - Fis family transcriptional regulator Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18625 YPZ3_RS18630 YPZ3_3139 YPZ3_RS18630 4025412 4026377 - tRNA-dihydrouridine synthase B gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18630 YPZ3_RS18635 YPZ3_3140 prmA prmA 4026966 4027847 - ribosomal protein L11 methyltransferase methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18635 YPZ3_RS18640 YPZ3_3141 panF panF 4027923 4029377 - sodium:pantothenate symporter mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18640 YPZ3_RS18645 YPZ3_RS18645 YPZ3_RS18645 4029367 4029609 - membrane protein gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18645 YPZ3_RS18650 YPZ3_3142 YPZ3_RS18650 4030967 4032316 - acetyl-CoA carboxylase biotin carboxylase subunit an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18650 YPZ3_RS18655 YPZ3_3143 YPZ3_RS18655 4032328 4032792 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18655 YPZ3_RS18660 YPZ3_3144 YPZ3_RS18660 4032950 4033402 - 3-dehydroquinate dehydratase gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18660 YPZ3_RS18665 YPZ3_3145 YPZ3_RS18665 4033665 4034285 - sulfoxide reductase heme-binding subunit YedZ in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18665 YPZ3_RS18670 YPZ3_3146 YPZ3_RS18670 4034285 4035385 - sulfoxide reductase catalytic subunit YedY in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18670 YPZ3_RS18675 YPZ3_3147 YPZ3_RS18675 4035608 4036585 - quinone oxidoreductase gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18675 YPZ3_RS18680 YPZ3_3148 YPZ3_RS18680 4036986 4038902 + hypothetical protein regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18680 YPZ3_RS18685 YPZ3_3149 YPZ3_RS18685 4039239 4040282 + rod shape-determining protein MreB gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18685 YPZ3_RS18690 YPZ3_3150 YPZ3_RS18690 4040486 4041481 + rod shape-determining protein MreC gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18690 YPZ3_RS18695 YPZ3_3151 YPZ3_RS18695 4041478 4041966 + rod shape-determining protein MreD part of cell wall structural complex MreBCD%3B transmembrane component gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18695 YPZ3_RS18700 YPZ3_3152 YPZ3_RS18700 4041980 4042573 + septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18700 YPZ3_RS18705 YPZ3_3153 YPZ3_RS18705 4042563 4044032 + ribonuclease G involved in the processing of the 5'end of 16S rRNA gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18705 YPZ3_RS18710 YPZ3_3154 YPZ3_RS18710 4044147 4048049 + membrane protein gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18710 YPZ3_RS18715 YPZ3_3155 YPZ3_RS18715 4048046 4048915 + amidohydrolase gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18715 YPZ3_RS18720 YPZ3_3156 tldD tldD 4048927 4050372 + protease TldD responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18720 YPZ3_RS18725 YPZ3_3157 YPZ3_RS18725 4050575 4053433 - toxin gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18725 YPZ3_RS18730 YPZ3_3158 YPZ3_RS18730 4053458 4056289 - toxin gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18730 YPZ3_RS18740 YPZ3_3159 YPZ3_RS18740 4056490 4056849 - hypothetical protein gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18740 YPZ3_RS18745 YPZ3_3160 YPZ3_RS18745 4056846 4057247 - peptidase M15 gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18745 YPZ3_RS18750 YPZ3_3161 YPZ3_RS18750 4057260 4057562 - hypothetical protein gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18750 YPZ3_RS18755 YPZ3_3162 YPZ3_RS18755 4057696 4062186 - toxin gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18755 YPZ3_RS18760 YPZ3_3163 YPZ3_RS18760 4062243 4064384 - toxin subunit gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18760 YPZ3_RS18765 YPZ3_3164 YPZ3_RS18765 4064453 4065835 - toxin subunit gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18765 YPZ3_RS18770 YPZ3_3165 YPZ3_RS18770 4065876 4068377 - toxin gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18770 YPZ3_RS18775 YPZ3_3166 YPZ3_RS18775 4068613 4069479 - LysR family transcriptional regulator gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18775 YPZ3_RS18780 YPZ3_3167 YPZ3_RS18780 4069740 4070651 - transcriptional regulator for aaeXAB operon gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18780 YPZ3_RS18785 YPZ3_RS18785 YPZ3_RS18785 4070954 4071157 + protein AaeX membrane protein AaeX%3B the gene is a member of the aaeXAB operon gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18785 YPZ3_RS18790 YPZ3_3168 YPZ3_RS18790 4071165 4072100 + p-hydroxybenzoic acid efflux pump subunit AaeA with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18790 YPZ3_RS18795 YPZ3_3169 YPZ3_RS18795 4072102 4074057 + p-hydroxybenzoic acid efflux pump subunit AaeB with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18795 YPZ3_RS18800 YPZ3_3170 gabD gabD 4074324 4075457 + succinate-semialdehyde dehydrogenase catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18800 YPZ3_RS18805 YPZ3_3171 YPZ3_RS18805 4075454 4075792 + aldehyde dehydrogenase gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18805 YPZ3_RS18810 YPZ3_3172 YPZ3_RS18810 4075987 4076460 + ribonuclease Ba gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18810 YPZ3_RS18815 YPZ3_RS18815 YPZ3_RS18815 4076465 4076746 + ribonuclease inhibitor gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18815 YPZ3_RS18820 YPZ3_3173 YPZ3_RS18820 4076858 4077406 - hypothetical protein gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18820 YPZ3_RS18825 YPZ3_3174 pmbA pmbA 4077587 4078927 + peptidase PMbA protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18825 YPZ3_RS18830 YPZ3_3175 YPZ3_RS18830 4079176 4079820 + hypothetical protein gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18830 YPZ3_RS18835 YPZ3_3176 YPZ3_RS18835 4080028 4080414 + soluble cytochrome b562 2 gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18835 YPZ3_RS18840 YPZ3_3177 YPZ3_RS18840 4080646 4081056 - nucleoside diphosphate kinase regulator Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18840 YPZ3_RS18845 YPZ3_3178 YPZ3_RS18845 4081409 4083076 - trehalose-6-phosphate hydrolase gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18845 YPZ3_RS18850 YPZ3_3179 YPZ3_RS18850 4083171 4084586 - PTS maltose transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18850 YPZ3_RS18855 YPZ3_3180 treR treR 4084997 4085950 - trehalose repressor regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18855 YPZ3_RS18860 YPZ3_3181 YPZ3_RS18860 4086184 4086660 - hypothetical protein gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18860 YPZ3_RS18865 YPZ3_3182 YPZ3_RS18865 4086959 4087345 - reactive intermediate/imine deaminase has endoribonuclease activity on mRNA gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18865 YPZ3_RS18870 YPZ3_3183 YPZ3_RS18870 4087483 4087947 - aspartate carbamoyltransferase regulatory chain involved in the allosteric regulation of aspartate carbamoyltransferase gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18870 YPZ3_RS18875 YPZ3_3184 YPZ3_RS18875 4087959 4088894 - aspartate carbamoyltransferase gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18875 YPZ3_RS18880 YPZ3_RS18880 YPZ3_RS18880 4089232 4089504 - phosphohistidinoprotein-hexose phosphotransferase gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18880 YPZ3_RS18885 YPZ3_3185 YPZ3_RS18885 4089501 4090355 - glmZ(sRNA)-inactivating NTPase glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18885 YPZ3_RS18890 YPZ3_3186 YPZ3_RS18890 4090661 4091143 - PTS sugar transporter subunit IIA involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr) gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18890 YPZ3_RS18895 YPZ3_RS18895 YPZ3_RS18895 4091261 4091548 - hypothetical protein YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18895 YPZ3_RS18900 YPZ3_3187 YPZ3_RS18900 4091572 4093005 - RNA polymerase sigma-54 factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18900 YPZ3_RS18905 YPZ3_3188 YPZ3_RS18905 4093067 4093792 - LPS export ABC transporter ATP-binding protein gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18905 YPZ3_RS18910 YPZ3_3189 YPZ3_RS18910 4093799 4094344 - sugar ABC transporter substrate-binding protein LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18910 YPZ3_RS18915 YPZ3_3190 YPZ3_RS18915 4094328 4094891 - LPS export ABC transporter periplasmic protein LptC gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18915 YPZ3_RS18920 YPZ3_3191 YPZ3_RS18920 4094888 4095451 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18920 YPZ3_RS18925 YPZ3_3192 YPZ3_RS18925 4095700 4096686 - arabinose 5-phosphate isomerase KdsD gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18925 YPZ3_RS18930 YPZ3_3193 YPZ3_RS18930 4096797 4097771 - sodium:calcium antiporter gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18930 YPZ3_RS18935 YPZ3_3194 YPZ3_RS18935 4098036 4098854 + organic solvent ABC transporter ATP-binding protein ABC transporter maintaining outer membrane lipid asymmetry gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18935 YPZ3_RS18940 YPZ3_3195 YPZ3_RS18940 4099072 4099854 + ABC transporter permease gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18940 YPZ3_RS18945 YPZ3_3196 YPZ3_RS18945 4099859 4100416 + outer membrane lipid asymmetry maintenance protein MlaD gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18945 YPZ3_RS18950 YPZ3_3197 YPZ3_RS18950 4100429 4101052 + organic solvent ABC transporter substrate-binding protein involved in maintaining outer membrane lipid asymmetry gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18950 YPZ3_RS18955 YPZ3_3198 YPZ3_RS18955 4101088 4101390 + anti-sigma B factor antagonist gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18955 YPZ3_RS18960 YPZ3_RS18960 YPZ3_RS18960 4101537 4101791 + hypothetical protein gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18960 YPZ3_RS18965 YPZ3_3199 YPZ3_RS18965 4101945 4103207 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18965 YPZ3_RS18970 YPZ3_3200 YPZ3_RS18970 4103388 4104476 - serine endoprotease gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18970 YPZ3_RS18975 YPZ3_3201 YPZ3_RS18975 4104702 4105160 + transposase gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18975 YPZ3_RS18980 YPZ3_3202 YPZ3_RS18980 4105277 4106650 - protease gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18980 YPZ3_RS18985 YPZ3_3203 YPZ3_RS18985 4106921 4107325 - hypothetical protein gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18985 YPZ3_RS18990 YPZ3_3204 YPZ3_RS18990 4107549 4108676 + hypothetical protein gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18990 YPZ3_RS18995 YPZ3_3205 YPZ3_RS18995 4108990 4109418 + 50S ribosomal protein L13 gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS18995 YPZ3_RS19000 YPZ3_3206 YPZ3_RS19000 4109433 4109825 + 30S ribosomal protein S9 gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19000 YPZ3_RS19005 YPZ3_RS19005 YPZ3_RS19005 4109822 4110019 - hypothetical protein gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19005 YPZ3_RS19010 YPZ3_3207 sspA sspA 4110199 4110840 + stringent starvation protein A transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19010 YPZ3_RS19015 YPZ3_3208 YPZ3_RS19015 4110846 4111361 + peptidase gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19015 YPZ3_RS19020 YPZ3_3209 YPZ3_RS19020 4111514 4111999 - hypothetical protein gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19020 YPZ3_RS19025 YPZ3_3210 YPZ3_RS19025 4112440 4113858 - glutamate synthase subunit beta gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19025 YPZ3_RS19030 YPZ3_3211 gltB gltB 4113868 4118334 - glutamate synthase subunit alpha catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19030 YPZ3_RS19035 YPZ3_3212 YPZ3_RS19035 4119157 4120080 + radical SAM protein gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19035 YPZ3_RS19040 YPZ3_RS19040 YPZ3_RS19040 4120061 4120276 + hypothetical protein gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19040 YPZ3_RS19045 YPZ3_3213 YPZ3_RS19045 4120344 4122680 + PAS domain-containing two-component system sensor histidine kinase/response regulator sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19045 YPZ3_RS19050 YPZ3_RS19050 YPZ3_RS19050 4122698 4122892 + hypothetical protein gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19050 YPZ3_RS19055 YPZ3_3214 YPZ3_RS19055 4122922 4123575 + isoprenoid biosynthesis protein gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19055 YPZ3_RS19060 YPZ3_3215 mtgA mtgA 4123572 4124297 + monofunctional biosynthetic peptidoglycan transglycosylase glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19060 YPZ3_RS19065 YPZ3_3216 YPZ3_RS19065 4124504 4125079 - hypothetical protein gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19065 YPZ3_RS19070 YPZ3_3217 YPZ3_RS19070 4125090 4125680 - DnaA initiator-associating protein DiaA Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19070 YPZ3_RS19075 YPZ3_3218 YPZ3_RS19075 4125951 4126304 - hypothetical protein gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19075 YPZ3_RS19080 YPZ3_3219 YPZ3_RS19080 4126388 4128361 - penicillin-binding protein activator LpoA gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19080 YPZ3_RS19085 YPZ3_3220 YPZ3_RS19085 4128424 4129323 + 16S rRNA (cytidine(1402)-2'-O)-methyltransferase gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19085 YPZ3_RS19090 YPZ3_3221 YPZ3_RS19090 4130260 4130964 - hypothetical protein gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19090 YPZ3_RS19095 YPZ3_3222 YPZ3_RS19095 4131226 4132119 + LysR family transcriptional regulator gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19095 YPZ3_RS19100 YPZ3_3223 YPZ3_RS19100 4132250 4133187 - glutathionyl-hydroquinone reductase YqjG gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19100 YPZ3_RS19105 YPZ3_3224 YPZ3_RS19105 4133200 4133979 - transposase gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19105 YPZ3_RS19110 YPZ3_3225 YPZ3_RS19110 4133979 4135001 - transposase gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19110 YPZ3_RS19115 YPZ3_3226 YPZ3_RS19115 4135058 4135759 + esterase YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19115 YPZ3_RS19120 YPZ3_RS19120 YPZ3_RS19120 4135834 4136112 + hypothetical protein gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19120 YPZ3_RS19125 YPZ3_3227 rpsF rpsF 4136126 4136518 + 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19125 YPZ3_RS19130 YPZ3_RS19130 YPZ3_RS19130 4136527 4136844 + primosomal replication protein n binds single-stranded DNA at the primosome assembly site gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19130 YPZ3_RS19135 YPZ3_RS19135 rpsR rpsR 4136849 4137076 + 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19135 YPZ3_RS19140 YPZ3_3228 rplI rplI 4137116 4137568 + 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19140 YPZ3_RS19145 YPZ3_RS19145 YPZ3_RS19145 4137604 4137774 + transposase gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19145 YPZ3_RS19150 YPZ3_3229 YPZ3_RS19150 4137764 4138222 + transposase gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19150 YPZ3_RS19155 YPZ3_3230 YPZ3_RS19155 4138344 4138799 - hypothetical protein gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19155 YPZ3_RS19160 YPZ3_3231 YPZ3_RS19160 4138939 4139679 - peptidoglycan-binding protein LysM gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19160 YPZ3_RS19165 YPZ3_3232 YPZ3_RS19165 4140022 4140642 + peptidyl-prolyl cis-trans isomerase FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19165 YPZ3_RS19170 YPZ3_3233 YPZ3_RS19170 4140740 4141405 - iron-sulfur cluster repair protein YtfE Involved in anaerobic NO protection and iron metabolism gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19170 YPZ3_RS19175 YPZ3_3234 cpdB cpdB 4141560 4143530 - 3'-nucleotidase periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19175 YPZ3_RS19180 YPZ3_3235 YPZ3_RS19180 4143965 4144705 + 3'-5'-bisphosphate nucleotidase catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19180 YPZ3_RS19185 YPZ3_3236 YPZ3_RS19185 4144708 4145271 - hypothetical protein gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19185 YPZ3_RS19190 YPZ3_RS19190 YPZ3_RS19190 4145607 4145819 + hypothetical protein gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19190 YPZ3_RS19195 YPZ3_3237 YPZ3_RS19195 4145927 4147258 - membrane protein gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19195 YPZ3_RS19200 YPZ3_3238 YPZ3_RS19200 4147536 4148174 - peptide methionine sulfoxide reductase MsrA this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19200 YPZ3_RS19205 YPZ3_3239 YPZ3_RS19205 4148449 4150185 + membrane protein gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19205 YPZ3_RS19210 YPZ3_3240 YPZ3_RS19210 4150182 4154099 + hypothetical protein gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19210 YPZ3_RS19215 YPZ3_3241 YPZ3_RS19215 4154102 4154458 + hypothetical protein gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19215 YPZ3_RS19220 YPZ3_3242 YPZ3_RS19220 4154576 4155103 - inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19220 YPZ3_RS19225 YPZ3_3243 YPZ3_RS19225 4155303 4156316 - fructose 1%2C6-bisphosphatase catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19225 YPZ3_RS19230 YPZ3_3244 YPZ3_RS19230 4156487 4157869 + UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19230 YPZ3_RS19235 YPZ3_RS19235 YPZ3_RS19235 4157956 4158162 + gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19235 YPZ3_RS19240 YPZ3_RS19240 YPZ3_RS19240 4158165 4158428 - hypothetical protein gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19240 YPZ3_RS19245 YPZ3_3245 YPZ3_RS19245 4158817 4159287 - arginine repressor regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19245 YPZ3_RS19250 YPZ3_3246 YPZ3_RS19250 4159751 4160689 + malate dehydrogenase oxidizes malate to oxaloacetate gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19250 YPZ3_RS19255 YPZ3_RS19255 YPZ3_RS19255 4161123 4161398 - DNA-binding protein gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19255 YPZ3_RS19260 YPZ3_3247 YPZ3_RS19260 4161582 4161929 + DNA-binding protein gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19260 YPZ3_RS19265 YPZ3_3248 YPZ3_RS19265 4162026 4162997 - octaprenyl diphosphate synthase gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19265 YPZ3_RS19270 YPZ3_3249 rplU rplU 4163257 4163568 + 50S ribosomal protein L21 gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19270 YPZ3_RS19275 YPZ3_RS19275 rpmA rpmA 4163588 4163845 + 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19275 YPZ3_RS19280 YPZ3_3250 YPZ3_RS19280 4163933 4164919 + membrane protein gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19280 YPZ3_RS19285 YPZ3_3251 obgE obgE 4164920 4166092 + GTPase Obg ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19285 YPZ3_RS19290 YPZ3_3252 YPZ3_RS19290 4166187 4167254 - two-component system sensor histidine kinase gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19290 YPZ3_RS19295 YPZ3_3253 YPZ3_RS19295 4167251 4167913 - two-component system response regulator gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19295 YPZ3_RS19300 YPZ3_3254 YPZ3_RS19300 4167919 4169367 - D-alanyl-D-alanine carboxypeptidase penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19300 YPZ3_RS19305 YPZ3_RS19305 greA greA 4169625 4170102 + transcription elongation factor GreA necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19305 YPZ3_RS19310 YPZ3_RS19310 YPZ3_RS19310 4170230 4170523 - RNA-binding protein RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19310 YPZ3_RS19315 YPZ3_3256 rrmJ rrmJ 4170670 4171299 + ribosomal RNA large subunit methyltransferase E Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19315 YPZ3_RS19320 YPZ3_3257 hflB hflB 4171356 4173290 + ATP-dependent metalloprotease inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19320 YPZ3_RS19325 YPZ3_3258 folP folP 4173410 4174243 + dihydropteroate synthase catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19325 YPZ3_RS19330 YPZ3_3259 glmM glmM 4174253 4175593 + phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19330 YPZ3_RS19335 YPZ3_RS19335 secG secG 4175816 4176151 + preprotein translocase subunit SecG gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19335 YPZ3_RS19340 YPZ3_t50 YPZ3_RS19340 4176244 4176330 + tRNA-Leu tRNA gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19340 YPZ3_RS19345 YPZ3_t51 YPZ3_RS19345 4176391 4176467 + tRNA-Met tRNA gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19345 YPZ3_RS19350 YPZ3_3260 YPZ3_RS19350 4176683 4177135 + ribosome maturation factor RimP required for the maturation of the 30S ribosomal subunits gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19350 YPZ3_RS19355 YPZ3_3261 nusA nusA 4177157 4178644 + transcription termination factor NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19355 YPZ3_RS19360 YPZ3_3262 infB infB 4178669 4181347 + translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19360 YPZ3_RS19365 YPZ3_3263 rbfA rbfA 4181413 4181823 + ribosome-binding factor A associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19365 YPZ3_RS19370 YPZ3_3264 truB truB 4181823 4182797 + tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19370 YPZ3_RS19375 YPZ3_p2 YPZ3_RS19375 4182919 4183188 + 30S ribosomal protein S15 gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19375 YPZ3_RS19380 YPZ3_3265 YPZ3_RS19380 4183275 4183790 + transposase gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19380 YPZ3_RS19385 YPZ3_RS19385 YPZ3_RS19385 4183844 4184442 + transposase gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19385 YPZ3_RS19390 YPZ3_RS19390 YPZ3_RS19390 4184633 4185745 - type VI secretion protein gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19390 YPZ3_RS19395 YPZ3_3267 YPZ3_RS19395 4185745 4186185 - lysozyme gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19395 YPZ3_RS19400 YPZ3_3268 YPZ3_RS19400 4186192 4187673 - type VI secretion protein gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19400 YPZ3_RS19405 YPZ3_3269 YPZ3_RS19405 4187741 4188238 - type VI secretion protein gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19405 YPZ3_RS19410 YPZ3_3270 YPZ3_RS19410 4188762 4189280 + hypothetical protein gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19410 YPZ3_RS19415 YPZ3_RS19415 YPZ3_RS19415 4189432 4189710 - hypothetical protein gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19415 YPZ3_RS19420 YPZ3_3271 YPZ3_RS19420 4190181 4191092 - maltose operon protein gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19420 YPZ3_RS19425 YPZ3_3272 lamB lamB 4191333 4192604 - maltoporin porin involved in the transport of maltose and maltodextrins gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19425 YPZ3_RS19430 YPZ3_3273 YPZ3_RS19430 4192675 4193784 - maltose/maltodextrin import ATP-binding protein MalK with malEFG is involved in import of maltose/maltodextrin gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19430 YPZ3_RS19435 YPZ3_RS19435 YPZ3_RS19435 4193788 4194024 - hypothetical protein gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19435 YPZ3_RS19440 YPZ3_3274 malE malE 4194612 4195823 + maltose ABC transporter substrate-binding protein functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19440 YPZ3_RS19445 YPZ3_3275 malF malF 4196010 4197587 + maltose transporter membrane protein with MalKGE is involved in maltose transport into the cell gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19445 YPZ3_RS19450 YPZ3_3276 malG malG 4197601 4198491 + maltose ABC transporter permease with MalKFE is involved in the transport of maltose into the cell gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19450 YPZ3_RS19455 YPZ3_3277 YPZ3_RS19455 4198634 4199041 - protein PsiE gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19455 YPZ3_RS19460 YPZ3_3278 pgi pgi 4199176 4200822 - glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19460 YPZ3_RS19465 YPZ3_3279 YPZ3_RS19465 4201192 4202577 + aspartate kinase catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19465 YPZ3_RS19475 YPZ3_3281 YPZ3_RS19475 4203335 4204834 + hemolysin activation protein gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19475 YPZ3_RS19480 YPZ3_3282 YPZ3_RS19480 4204904 4209811 + hemolysin gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19480 YPZ3_RS19485 YPZ3_3283 metH metH 4209907 4213602 - B12-dependent methionine synthase one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19485 YPZ3_RS19490 YPZ3_3284 YPZ3_RS19490 4213817 4214164 + IclR family transcriptional regulator gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19490 YPZ3_RS19495 YPZ3_3285 YPZ3_RS19495 4214149 4214661 + IclR family transcriptional regulator gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19495 YPZ3_RS19500 YPZ3_3286 aceK aceK 4214781 4216508 - isocitrate dehydrogenase catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19500 YPZ3_RS19505 YPZ3_3287 YPZ3_RS19505 4216764 4218071 - isocitrate lyase gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19505 YPZ3_RS19510 YPZ3_3288 YPZ3_RS19510 4218118 4219716 - malate synthase Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19510 YPZ3_RS19515 YPZ3_3289 YPZ3_RS19515 4220137 4221066 - homoserine O-succinyltransferase catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19515 YPZ3_RS19520 YPZ3_RS19520 YPZ3_RS19520 4221134 4221406 + hypothetical protein gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19520 YPZ3_RS19525 YPZ3_r11 YPZ3_RS19525 4221806 4221921 - 5S ribosomal RNA rRNA gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19525 YPZ3_RS19530 YPZ3_t52 YPZ3_RS19530 4221962 4222037 - tRNA-Thr tRNA gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19530 YPZ3_RS19535 YPZ3_r12 YPZ3_RS19535 4222053 4222168 - 5S ribosomal RNA rRNA gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19535 YPZ3_RS19540 YPZ3_r13 YPZ3_RS19540 4222260 4225193 - 23S ribosomal RNA rRNA gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19540 YPZ3_RS19545 YPZ3_t53 YPZ3_RS19545 4225403 4225478 - tRNA-Ala tRNA gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19545 YPZ3_RS19550 YPZ3_t54 YPZ3_RS19550 4225530 4225606 - tRNA-Ile tRNA gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19550 YPZ3_RS19555 YPZ3_r14 YPZ3_RS19555 4225706 4227254 - 16S ribosomal RNA rRNA gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19555 YPZ3_RS19565 YPZ3_3290 purH purH 4227910 4229499 + bifunctional purine biosynthesis protein PurH involved in de novo purine biosynthesis gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19565 YPZ3_RS19570 YPZ3_3291 YPZ3_RS19570 4229559 4230845 + phosphoribosylamine--glycine ligase catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19570 YPZ3_RS19575 YPZ3_3292 YPZ3_RS19575 4230993 4231646 - hypothetical protein gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19575 YPZ3_RS19580 YPZ3_RS19580 YPZ3_RS19580 4231696 4231971 - transcriptional regulator gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19580 YPZ3_RS19585 YPZ3_3293 YPZ3_RS19585 4232160 4232750 - hypothetical protein gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19585 YPZ3_RS19590 YPZ3_RS19590 YPZ3_RS19590 4232796 4233502 - endonuclease V Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19590 YPZ3_RS19595 YPZ3_3295 hemE hemE 4233568 4234635 - uroporphyrinogen decarboxylase catalyzes the formation of coproporphyrinogen from uroporphyrinogen III gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19595 YPZ3_RS19600 YPZ3_3296 YPZ3_RS19600 4234754 4235497 - hypothetical protein gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19600 YPZ3_RS19605 YPZ3_3297 nudC nudC 4235632 4236414 - NADH pyrophosphatase can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19605 YPZ3_RS19610 YPZ3_3298 YPZ3_RS19610 4236511 4237020 + regulator of sigma D gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19610 YPZ3_RS19615 YPZ3_RS19615 YPZ3_RS19615 4237143 4237403 + hypothetical protein gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19615 YPZ3_RS19620 YPZ3_3299 YPZ3_RS19620 4237396 4239441 + phosphomethylpyrimidine synthase catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19620 YPZ3_RS19625 YPZ3_3300 YPZ3_RS19625 4239428 4240102 + thiamine-phosphate pyrophosphorylase catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19625 YPZ3_RS19630 YPZ3_3301 YPZ3_RS19630 4240092 4240889 + molybdopterin biosynthesis protein MoeB gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19630 YPZ3_RS19635 YPZ3_RS19635 YPZ3_RS19635 4240886 4241101 + thiamine biosynthesis protein ThiS gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19635 YPZ3_RS19640 YPZ3_3302 YPZ3_RS19640 4241103 4241918 + thiazole synthase gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19640 YPZ3_RS19645 YPZ3_3303 thiH thiH 4241911 4243041 + thiamine biosynthesis protein ThiH in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19645 YPZ3_RS19650 YPZ3_RS19650 YPZ3_RS19650 4243084 4243197 - hypothetical protein gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19650 YPZ3_RS19655 YPZ3_RS19655 YPZ3_RS19655 4243316 4243483 + invasin gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19655 YPZ3_RS19660 YPZ3_3304 YPZ3_RS19660 4243473 4243931 + transposase gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19660 YPZ3_RS19665 YPZ3_3305 YPZ3_RS19665 4244058 4248278 - DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19665 YPZ3_RS19670 YPZ3_3306 rpoB rpoB 4248407 4252435 - DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19670 YPZ3_RS19675 YPZ3_3307 rplL rplL 4252778 4253146 - 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19675 YPZ3_RS19680 YPZ3_3308 rplJ rplJ 4253213 4253710 - 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19680 YPZ3_RS19685 YPZ3_3309 YPZ3_RS19685 4254075 4254779 - 50S ribosomal protein L1 gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19685 YPZ3_RS19690 YPZ3_3310 YPZ3_RS19690 4254783 4255211 - 50S ribosomal protein L11 gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19690 YPZ3_RS19695 YPZ3_3311 nusG nusG 4255402 4255947 - transcription termination/antitermination protein NusG Modulates Rho-dependent transcription termination gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19695 YPZ3_RS19700 YPZ3_3312 secE secE 4255949 4256332 - preprotein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19700 YPZ3_RS19705 YPZ3_3313 tuf tuf 4256583 4257767 - elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19705 YPZ3_RS19710 YPZ3_t55 YPZ3_RS19710 4257876 4257951 - tRNA-Thr tRNA gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19710 YPZ3_RS19715 YPZ3_t56 YPZ3_RS19715 4257958 4258032 - tRNA-Gly tRNA gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19715 YPZ3_RS19720 YPZ3_t57 YPZ3_RS19720 4258182 4258266 - tRNA-Tyr tRNA gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19720 YPZ3_RS19725 YPZ3_t58 YPZ3_RS19725 4258285 4258360 - tRNA-Thr tRNA gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19725 YPZ3_RS19730 YPZ3_3314 YPZ3_RS19730 4258824 4259603 - transposase gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19730 YPZ3_RS19735 YPZ3_3315 YPZ3_RS19735 4259603 4260625 - transposase gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19735 YPZ3_RS19740 YPZ3_3316 YPZ3_RS19740 4260715 4261266 + acetyltransferase gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19740 YPZ3_RS19745 YPZ3_3317 YPZ3_RS19745 4261477 4262427 + pantothenate kinase gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19745 YPZ3_RS19750 YPZ3_3318 YPZ3_RS19750 4262462 4263421 - bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19750 YPZ3_RS19755 YPZ3_3319 murB murB 4263418 4264455 - UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19755 YPZ3_RS19760 YPZ3_r15 YPZ3_RS19760 4264919 4265034 - 5S ribosomal RNA rRNA gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19760 YPZ3_RS19765 YPZ3_r16 YPZ3_RS19765 4265126 4268059 - 23S ribosomal RNA rRNA gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19765 YPZ3_RS19770 YPZ3_t59 YPZ3_RS19770 4268269 4268344 - tRNA-Ala tRNA gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19770 YPZ3_RS19775 YPZ3_t60 YPZ3_RS19775 4268396 4268472 - tRNA-Ile tRNA gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19775 YPZ3_RS19780 YPZ3_r17 YPZ3_RS19780 4268572 4270120 - 16S ribosomal RNA rRNA gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19780 YPZ3_RS19790 YPZ3_RS19790 YPZ3_RS19790 4270605 4271138 - protoporphyrinogen oxidase gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19790 YPZ3_RS19795 YPZ3_3320 YPZ3_RS19795 4271160 4272611 - potassium transporter gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19795 YPZ3_RS19800 YPZ3_3321 YPZ3_RS19800 4272651 4273127 - hypothetical protein gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19800 YPZ3_RS19805 YPZ3_3322 YPZ3_RS19805 4273200 4273658 - transposase gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19805 YPZ3_RS19810 YPZ3_RS19810 YPZ3_RS19810 4273763 4273972 - hypothetical protein gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19810 YPZ3_RS19815 YPZ3_3323 YPZ3_RS19815 4273972 4275303 - Xaa-Pro dipeptidase catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19815 YPZ3_RS19820 YPZ3_3324 fadB fadB 4275630 4277819 + fatty acid oxidation complex subunit alpha includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19820 YPZ3_RS19825 YPZ3_3325 fadA fadA 4277831 4278994 + 3-ketoacyl-CoA thiolase FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19825 YPZ3_RS19830 YPZ3_3326 fre fre 4279154 4279855 - FMN reductase NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19830 YPZ3_RS19835 YPZ3_3327 YPZ3_RS19835 4279910 4281406 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19835 YPZ3_RS19840 YPZ3_3328 rfaH rfaH 4281654 4282142 + transcriptional regulator gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19840 YPZ3_RS19845 YPZ3_3329 YPZ3_RS19845 4282252 4283274 - delta-aminolevulinic acid dehydratase catalyzes the formation of porphobilinogen from 5-aminolevulinate gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19845 YPZ3_RS19850 YPZ3_3330 YPZ3_RS19850 4283289 4283624 - deoxyribonuclease gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19850 YPZ3_RS19855 YPZ3_3331 YPZ3_RS19855 4283663 4284442 - transposase gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19855 YPZ3_RS19860 YPZ3_3332 YPZ3_RS19860 4284442 4285464 - transposase gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19860 YPZ3_RS19865 YPZ3_3333 YPZ3_RS19865 4285491 4286030 - deoxyribonuclease gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19865 YPZ3_RS19870 YPZ3_3334 YPZ3_RS19870 4286086 4286862 - preprotein translocase subunit TatC with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19870 YPZ3_RS19875 YPZ3_3335 YPZ3_RS19875 4286865 4287527 - Sec-independent protein translocase TatB gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19875 YPZ3_RS19880 YPZ3_RS19880 YPZ3_RS19880 4287531 4287797 - protein translocase TatA gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19880 YPZ3_RS19885 YPZ3_3336 ubiB ubiB 4287977 4289608 - hypothetical protein an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19885 YPZ3_RS19890 YPZ3_3337 YPZ3_RS19890 4289608 4290258 - sterol-binding protein gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19890 YPZ3_RS19895 YPZ3_3338 ubiE ubiE 4290272 4291027 - ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19895 YPZ3_RS19900 YPZ3_3339 YPZ3_RS19900 4291119 4292624 - DNA recombination protein RmuC YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19900 YPZ3_RS19905 YPZ3_3340 YPZ3_RS19905 4292832 4293362 - cytochrome O ubiquinol oxidase gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19905 YPZ3_RS19910 YPZ3_3341 YPZ3_RS19910 4293634 4295445 - carbon starvation protein CstA gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19910 YPZ3_RS19915 YPZ3_3342 YPZ3_RS19915 4295809 4296639 - C4-dicarboxylate ABC transporter gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19915 YPZ3_RS19920 YPZ3_3343 YPZ3_RS19920 4296760 4297521 - uridine phosphorylase catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19920 YPZ3_RS19925 YPZ3_3344 YPZ3_RS19925 4297949 4298821 + carboxymethylenebutenolidase gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19925 YPZ3_RS19930 YPZ3_3345 YPZ3_RS19930 4298876 4301167 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19930 YPZ3_RS19935 YPZ3_3346 YPZ3_RS19935 4301258 4302211 + LysR family transcriptional regulator homocysteine-binding%3B positive regulator of metA%2C metE and metH gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19935 YPZ3_RS19940 YPZ3_RS19940 YPZ3_RS19940 4302099 4302998 - membrane protein gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19940 YPZ3_RS19945 YPZ3_3347 YPZ3_RS19945 4303380 4304306 - membrane protein gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19945 YPZ3_RS19950 YPZ3_3348 ugpQ ugpQ 4304407 4305156 - glycerophosphodiester phosphodiesterase hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19950 YPZ3_RS19955 YPZ3_3349 ugpC ugpC 4305153 4306226 - sn-glycerol-3-phosphate import ATP-binding protein UgpC part of the UgpABCE glycerol-3-phosphate uptake system gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19955 YPZ3_RS19960 YPZ3_3350 YPZ3_RS19960 4306233 4307078 - sn-glycerol 3-phosphate ABC transporter permease with UgpABC is involved in uptake of glycerol-3-phosphate gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19960 YPZ3_RS19965 YPZ3_3351 YPZ3_RS19965 4307075 4307962 - sn-glycerol 3-phosphate ABC transporter permease with UgpEC is involved in the uptake of glycerol-3-phosphate gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19965 YPZ3_RS19970 YPZ3_3352 YPZ3_RS19970 4308260 4309579 - sn-glycerol-3-phosphate-binding periplasmic protein UgpB with UgpACE is involved in the uptake of glycerol-3-phosphate gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19970 YPZ3_RS19975 YPZ3_3353 YPZ3_RS19975 4310134 4310625 + hypothetical protein gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19975 YPZ3_RS19980 YPZ3_3354 YPZ3_RS19980 4310892 4313225 + hypothetical protein gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19980 YPZ3_RS19985 YPZ3_3355 YPZ3_RS19985 4313243 4313929 + pilus assembly protein gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19985 YPZ3_RS19990 YPZ3_3356 YPZ3_RS19990 4313901 4314548 + hypothetical protein gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19990 YPZ3_RS19995 YPZ3_3357 YPZ3_RS19995 4314610 4315128 + hypothetical protein gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS19995 YPZ3_RS20000 YPZ3_3358 YPZ3_RS20000 4315304 4316410 + hypothetical protein gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20000 YPZ3_RS20005 YPZ3_3359 YPZ3_RS20005 4316525 4316986 - hypothetical protein gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20005 YPZ3_RS20010 YPZ3_3360 livF livF 4317214 4317915 - amino acid ABC transporter ATP-binding protein with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20010 YPZ3_RS20015 YPZ3_3361 livG livG 4317960 4318727 - amino acid ABC transporter ATP-binding protein Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20015 YPZ3_RS20020 YPZ3_3362 livM livM 4318724 4320010 - leucine/isoleucine/valine transporter permease subunit Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20020 YPZ3_RS20025 YPZ3_3363 YPZ3_RS20025 4320007 4320933 - branched-chain amino acid transporter permease subunit LivH LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20025 YPZ3_RS20030 YPZ3_3364 YPZ3_RS20030 4321114 4322229 - amino acid ABC transporter substrate-binding protein with LivFGHM is involved in the high affinity leucine transport gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20030 YPZ3_RS20035 YPZ3_3365 YPZ3_RS20035 4322651 4323043 + acetyltransferase gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20035 YPZ3_RS20040 YPZ3_3366 YPZ3_RS20040 4323289 4323747 - transposase gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20040 YPZ3_RS20045 YPZ3_RS20045 YPZ3_RS20045 4323737 4323907 - transposase gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20045 YPZ3_RS20050 YPZ3_3367 YPZ3_RS20050 4323961 4324818 - RNA polymerase factor sigma-32 binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20050 YPZ3_RS20055 YPZ3_3368 ftsX ftsX 4325129 4326082 - cell division protein FtsX ABC transporter%2C membrane protein gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20055 YPZ3_RS20060 YPZ3_3369 YPZ3_RS20060 4326072 4326740 - cell division protein FtsE ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20060 YPZ3_RS20065 YPZ3_3370 YPZ3_RS20065 4326746 4328407 - signal recognition particle-docking protein FtsY gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20065 YPZ3_RS20070 YPZ3_RS20070 YPZ3_RS20070 4328436 4328579 + hypothetical protein gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20070 YPZ3_RS20075 YPZ3_RS20075 rsmD rsmD 4328689 4329351 + 16S rRNA methyltransferase catalyzes the methylation of 16S rRNA at position G966 gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20075 YPZ3_RS20080 YPZ3_RS20080 YPZ3_RS20080 4329341 4329613 + membrane protein gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20080 YPZ3_RS20085 YPZ3_3372 YPZ3_RS20085 4329800 4330219 - membrane protein gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20085 YPZ3_RS20090 YPZ3_3373 YPZ3_RS20090 4330431 4330751 - hypothetical protein gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20090 YPZ3_RS20095 YPZ3_3374 YPZ3_RS20095 4331041 4331667 + membrane protein gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20095 YPZ3_RS20100 YPZ3_3375 zntA zntA 4332081 4334447 + cadmium-transporting ATPase P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20100 YPZ3_RS20105 YPZ3_RS20105 YPZ3_RS20105 4334547 4334801 - sulfurtransferase TusA TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20105 YPZ3_RS20110 YPZ3_3377 YPZ3_RS20110 4335085 4335753 + membrane protein gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20110 YPZ3_RS20115 YPZ3_3378 YPZ3_RS20115 4335883 4336410 + lipoprotein gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20115 YPZ3_RS20120 YPZ3_3379 glpC glpC 4336572 4337867 - sn-glycerol-3-phosphate dehydrogenase subunit C anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20120 YPZ3_RS20125 YPZ3_3380 YPZ3_RS20125 4337864 4339138 - anaerobic glycerol-3-phosphate dehydrogenase subunit B sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20125 YPZ3_RS20130 YPZ3_3381 YPZ3_RS20130 4339128 4340783 - sn-glycerol-3-phosphate dehydrogenase subunit A gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20130 YPZ3_RS20135 YPZ3_RS20135 YPZ3_RS20135 4340957 4341055 - sn-glycerol-3-phosphate dehydrogenase subunit A gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20135 YPZ3_RS20140 YPZ3_3382 glpQ glpQ 4341408 4342523 + glycerophosphodiester phosphodiesterase hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20140 YPZ3_RS20145 YPZ3_3383 YPZ3_RS20145 4342597 4343796 - viral enhancin family protein gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20145 YPZ3_RS20150 YPZ3_3384 YPZ3_RS20150 4344073 4344882 - hydrolase gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20150 YPZ3_RS20155 YPZ3_3385 YPZ3_RS20155 4344917 4345930 - lysophospholipase L2 lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20155 YPZ3_RS20160 YPZ3_3386 rhtB rhtB 4346126 4346746 + threonine transporter RhtB gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20160 YPZ3_RS20165 YPZ3_3387 YPZ3_RS20165 4346797 4347417 - threonine transporter RhtB gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20165 YPZ3_RS20170 YPZ3_3388 YPZ3_RS20170 4347524 4349356 - ATP-dependent DNA helicase RecQ functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20170 YPZ3_RS20175 YPZ3_3389 YPZ3_RS20175 4349434 4350312 - phospholipase A catalyzes the hydrolysis of phosphatidylcholine gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20175 YPZ3_RS20180 YPZ3_3390 YPZ3_RS20180 4350534 4351004 + hypothetical protein gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20180 YPZ3_RS20185 YPZ3_3391 YPZ3_RS20185 4351091 4351981 + chloramphenicol resistance permease RarD gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20185 YPZ3_RS20190 YPZ3_3392 YPZ3_RS20190 4352079 4353029 - magnesium transporter CorA responsible for the influx of magnesium ions gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20190 YPZ3_RS20195 YPZ3_3393 YPZ3_RS20195 4353678 4354508 - hypothetical protein gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20195 YPZ3_RS20200 YPZ3_3394 YPZ3_RS20200 4354534 4355751 - hypothetical protein gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20200 YPZ3_RS20205 YPZ3_3395 YPZ3_RS20205 4356179 4356865 + TetR family transcriptional regulator gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20205 YPZ3_RS20210 YPZ3_3396 uvrD uvrD 4356979 4359141 - DNA-dependent helicase unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20210 YPZ3_RS20215 YPZ3_3397 YPZ3_RS20215 4359243 4359959 - flavin mononucleotide phosphatase YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20215 YPZ3_RS20220 YPZ3_3398 xerC xerC 4359959 4360870 - tyrosine recombinase XerC site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20220 YPZ3_RS20225 YPZ3_3399 YPZ3_RS20225 4360867 4361571 - hypothetical protein gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20225 YPZ3_RS20230 YPZ3_3400 dapF dapF 4361636 4362460 - diaminopimelate epimerase involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20230 YPZ3_RS20235 YPZ3_RS20235 YPZ3_RS20235 4362644 4362832 - lipoprotein gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20235 YPZ3_RS20240 YPZ3_3401 cyaY cyaY 4362984 4363304 + protein CyaY iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20240 YPZ3_RS20245 YPZ3_3402 cyaA cyaA 4363548 4366100 - adenylate cyclase catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20245 YPZ3_RS20250 YPZ3_3403 hemC hemC 4366594 4367535 + porphobilinogen deaminase transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20250 YPZ3_RS20255 YPZ3_3404 hemD hemD 4367532 4368281 + uroporphyrinogen III methyltransferase catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20255 YPZ3_RS20260 YPZ3_3405 YPZ3_RS20260 4368312 4369436 + uroporphyrinogen III methyltransferase gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20260 YPZ3_RS20265 YPZ3_3406 YPZ3_RS20265 4369439 4370659 + protoheme IX biogenesis protein gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20265 YPZ3_RS20270 YPZ3_3407 YPZ3_RS20270 4370852 4371310 - transposase gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20270 YPZ3_RS20275 YPZ3_t61 YPZ3_RS20275 4372177 4372253 - tRNA-Pro tRNA gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20275 YPZ3_RS20280 YPZ3_t62 YPZ3_RS20280 4372329 4372415 - tRNA-Leu tRNA gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20280 YPZ3_RS20285 YPZ3_t63 YPZ3_RS20285 4372432 4372507 - tRNA-His tRNA gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20285 YPZ3_RS20290 YPZ3_t64 YPZ3_RS20290 4372591 4372667 - tRNA-Arg tRNA gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20290 YPZ3_RS20295 YPZ3_3408 YPZ3_RS20295 4372816 4374207 - alanine glycine permease involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20295 YPZ3_RS20300 YPZ3_3409 YPZ3_RS20300 4374731 4375471 - UDP-N-acetyl-D-mannosaminuronic acid transferase gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20300 YPZ3_RS20305 YPZ3_3410 YPZ3_RS20305 4375480 4376844 - polymerase enterobacterial common antigen polymerase gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20305 YPZ3_RS20310 YPZ3_3411 YPZ3_RS20310 4376841 4377926 - TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20310 YPZ3_RS20315 YPZ3_3412 YPZ3_RS20315 4377949 4379205 - translocase involved in the movement of lipid III across the membrane gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20315 YPZ3_RS20320 YPZ3_3413 YPZ3_RS20320 4379207 4380337 - TDP-4-oxo-6-deoxy-D-glucose aminotransferase catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20320 YPZ3_RS20325 YPZ3_3414 YPZ3_RS20325 4380339 4381076 - TDP-fucosamine acetyltransferase gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20325 YPZ3_RS20330 YPZ3_3415 YPZ3_RS20330 4381054 4381935 - glucose-1-phosphate thymidylyltransferase gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20330 YPZ3_RS20335 YPZ3_3416 YPZ3_RS20335 4382230 4383297 - dTDP-glucose 4%2C6-dehydratase gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20335 YPZ3_RS20340 YPZ3_3417 wecC wecC 4383294 4384556 - UDP-N-acetyl-D-mannosamine dehydrogenase catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20340 YPZ3_RS20345 YPZ3_3418 YPZ3_RS20345 4384553 4385683 - UDP-N-acetylglucosamine 2-epimerase gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20345 YPZ3_RS20350 YPZ3_3419 YPZ3_RS20350 4385964 4387040 - LPS biosynthesis protein Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20350 YPZ3_RS20355 YPZ3_3420 YPZ3_RS20355 4387061 4388143 - UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20355 YPZ3_RS20360 YPZ3_3421 rho rho 4388693 4389952 - transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20360 YPZ3_RS20365 YPZ3_3422 trxA trxA 4390432 4390758 - thioredoxin gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20365 YPZ3_RS20370 YPZ3_3423 YPZ3_RS20370 4390877 4392163 + ATP-dependent RNA helicase RhlB enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20370 YPZ3_RS20375 YPZ3_RS20375 YPZ3_RS20375 4392355 4392672 + guanosine-5'-triphosphate%2C3'-diphosphatepyrophosphatase gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20375 YPZ3_RS20380 YPZ3_3424 YPZ3_RS20380 4392651 4393661 + guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20380 YPZ3_RS20385 YPZ3_3425 YPZ3_RS20385 4393829 4395850 - ATP-dependent DNA helicase Rep single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20385 YPZ3_RS20390 YPZ3_RS20390 YPZ3_RS20390 4395849 4396034 + hypothetical protein gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20390 YPZ3_RS20395 YPZ3_RS20395 YPZ3_RS20395 4396054 4396335 + peptidyl-prolyl cis-trans isomerase rotamase C%3B accelerates isomerization of the peptidyl prolyl bond gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20395 YPZ3_RS20400 YPZ3_3426 YPZ3_RS20400 4396574 4397365 + glutamine cyclotransferase gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20400 YPZ3_RS20405 YPZ3_3427 YPZ3_RS20405 4397462 4398670 + transposase gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20405 YPZ3_RS20410 YPZ3_RS20410 YPZ3_RS20410 4398993 4399169 - hypothetical protein gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20410 YPZ3_RS20415 YPZ3_3428 YPZ3_RS20415 4399480 4400010 + fimbrial protein gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20415 YPZ3_RS20420 YPZ3_3429 YPZ3_RS20420 4400074 4400805 + gram-negative pili assembly chaperone gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20420 YPZ3_RS20425 YPZ3_3430 YPZ3_RS20425 4400833 4403460 + outer membrane usher protein gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20425 YPZ3_RS20430 YPZ3_3431 YPZ3_RS20430 4403567 4404844 + fimbrial protein gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20430 YPZ3_RS20435 YPZ3_3432 YPZ3_RS20435 4404810 4405628 + molecular chaperone gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20435 YPZ3_RS20440 YPZ3_RS20440 YPZ3_RS20440 4405652 4405810 + hypothetical protein gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20440 YPZ3_RS20445 YPZ3_RS20445 YPZ3_RS20445 4406263 4406520 - colicin transporter gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20445 YPZ3_RS20450 YPZ3_RS20450 YPZ3_RS20450 4406522 4406773 - HNH nuclease gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20450 YPZ3_RS20455 YPZ3_RS20455 YPZ3_RS20455 4407026 4407289 - hypothetical protein gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20455 YPZ3_RS20460 YPZ3_3433 YPZ3_RS20460 4407289 4408719 - colicin gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20460 YPZ3_RS20465 YPZ3_RS20465 YPZ3_RS20465 4408927 4409127 - hypothetical protein gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20465 YPZ3_RS20470 YPZ3_3434 YPZ3_RS20470 4409308 4410786 - ketol-acid reductoisomerase catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20470 YPZ3_RS20475 YPZ3_3435 YPZ3_RS20475 4411072 4411953 + transcriptional regulator participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20475 YPZ3_RS20480 YPZ3_RS20480 YPZ3_RS20480 4412008 4412217 - hypothetical protein gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20480 YPZ3_RS20485 YPZ3_RS20485 YPZ3_RS20485 4412865 4413020 + hypothetical protein gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20485 YPZ3_RS20490 YPZ3_3436 YPZ3_RS20490 4413113 4413784 + hypothetical protein gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20490 YPZ3_RS20495 YPZ3_3437 YPZ3_RS20495 4413768 4414229 + membrane protein gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20495 YPZ3_RS20500 YPZ3_3438 YPZ3_RS20500 4414309 4414773 + membrane protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20500 YPZ3_RS20505 YPZ3_3439 YPZ3_RS20505 4414904 4416448 - threonine dehydratase threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20505 YPZ3_RS20510 YPZ3_3440 YPZ3_RS20510 4416454 4418304 - dihydroxy-acid dehydratase catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20510 YPZ3_RS20515 YPZ3_3441 YPZ3_RS20515 4418615 4419541 - branched-chain amino acid aminotransferase gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20515 YPZ3_RS20520 YPZ3_RS20520 ilvM ilvM 4419564 4419821 - acetolactate synthase gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20520 YPZ3_RS20525 YPZ3_3442 YPZ3_RS20525 4419818 4421464 - acetolactate synthase catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20525 YPZ3_RS20530 YPZ3_3443 YPZ3_RS20530 4422087 4423610 + ATPase among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20530 YPZ3_RS20535 YPZ3_3444 YPZ3_RS20535 4423867 4424205 - hypothetical protein gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20535 YPZ3_RS20540 YPZ3_3445 YPZ3_RS20540 4424324 4425205 + transcriptional regulator Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20540 YPZ3_RS20545 YPZ3_3446 YPZ3_RS20545 4425192 4426184 - ABC transporter permease membrane component of a putative sugar ABC transporter system gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20545 YPZ3_RS20550 YPZ3_3447 YPZ3_RS20550 4426184 4427182 - sugar ABC transporter permease gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20550 YPZ3_RS20555 YPZ3_3448 YPZ3_RS20555 4427215 4428705 - sugar ABC transporter ATP-binding protein gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20555 YPZ3_RS20560 YPZ3_3449 YPZ3_RS20560 4428791 4429747 - sugar ABC transporter substrate-binding protein gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20560 YPZ3_RS20565 YPZ3_t65 YPZ3_RS20565 4430726 4430801 - tRNA-Trp tRNA gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20565 YPZ3_RS20570 YPZ3_t66 YPZ3_RS20570 4430810 4430886 - tRNA-Asp tRNA gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20570 YPZ3_RS20575 YPZ3_r18 YPZ3_RS20575 4431012 4431127 - 5S ribosomal RNA rRNA gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20575 YPZ3_RS20580 YPZ3_r19 YPZ3_RS20580 4431219 4434152 - 23S ribosomal RNA rRNA gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20580 YPZ3_RS20585 YPZ3_t67 YPZ3_RS20585 4434396 4434471 - tRNA-Glu tRNA gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20585 YPZ3_RS20590 YPZ3_r20 YPZ3_RS20590 4434605 4436153 - 16S ribosomal RNA rRNA gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20590 YPZ3_RS20600 YPZ3_3450 YPZ3_RS20600 4436607 4437470 - glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20600 YPZ3_RS20605 YPZ3_3451 btuB btuB 4437415 4439292 - vitamin B12 transporter BtuB involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20605 YPZ3_RS20610 YPZ3_RS20610 YPZ3_RS20610 4439528 4439773 - hypothetical protein gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20610 YPZ3_RS20615 YPZ3_3452 YPZ3_RS20615 4439772 4440875 + tRNA/tmRNA (uracil-C(5))-methyltransferase catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20615 YPZ3_RS20620 YPZ3_3453 YPZ3_RS20620 4441009 4441416 - membrane protein gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20620 YPZ3_RS20625 YPZ3_3454 YPZ3_RS20625 4441429 4442064 - transcriptional regulator negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20625 YPZ3_RS20630 YPZ3_3455 YPZ3_RS20630 4442282 4443682 + soluble pyridine nucleotide transhydrogenase catalyzes the conversion of NADPH to NADH gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20630 YPZ3_RS20635 YPZ3_3456 YPZ3_RS20635 4443665 4444582 - transcriptional regulator Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20635 YPZ3_RS20640 YPZ3_3457 YPZ3_RS20640 4444729 4445460 + glutathione amide-dependent peroxidase gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20640 YPZ3_RS20645 YPZ3_3458 YPZ3_RS20645 4445555 4447018 + dihydrolipoamide dehydrogenase Catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20645 YPZ3_RS20650 YPZ3_3459 YPZ3_RS20650 4447134 4447937 - transporter TonB gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20650 YPZ3_RS20655 YPZ3_3460 YPZ3_RS20655 4448002 4449330 - hemolysin secretion protein D gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20655 YPZ3_RS20660 YPZ3_3461 YPZ3_RS20660 4449406 4451214 - peptidase gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20660 YPZ3_RS20665 YPZ3_3462 YPZ3_RS20665 4451380 4451997 - hemophore HasA gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20665 YPZ3_RS20670 YPZ3_3463 YPZ3_RS20670 4452219 4454711 - TonB-dependent receptor gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20670 YPZ3_RS20675 YPZ3_RS20675 YPZ3_RS20675 4455022 4455147 + hypothetical protein gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20675 YPZ3_RS20680 YPZ3_3464 YPZ3_RS20680 4455310 4456683 - argininosuccinate lyase catalyzes the formation of arginine from (N-L-arginino)succinate gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20680 YPZ3_RS20685 YPZ3_3465 YPZ3_RS20685 4456850 4457623 - acetylglutamate kinase gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20685 YPZ3_RS20690 YPZ3_3466 YPZ3_RS20690 4457792 4458796 - N-acetyl-gamma-glutamyl-phosphate reductase gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20690 YPZ3_RS20695 YPZ3_3467 YPZ3_RS20695 4459047 4460210 + acetylornithine deacetylase catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20695 YPZ3_RS20700 YPZ3_3468 YPZ3_RS20700 4460584 4463220 + phosphoenolpyruvate carboxylase catalyzes the formation of oxaloacetate from phosphoenolpyruvate gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20700 YPZ3_RS20705 YPZ3_3469 YPZ3_RS20705 4463963 4464478 + transposase gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20705 YPZ3_RS20710 YPZ3_3470 YPZ3_RS20710 4464532 4465317 + integrase gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20710 YPZ3_RS20715 YPZ3_3471 YPZ3_RS20715 4465790 4467019 + multidrug transporter MdfA gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20715 YPZ3_RS20720 YPZ3_RS20720 YPZ3_RS20720 4467168 4467371 - hypothetical protein gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20720 YPZ3_RS20725 YPZ3_RS20725 YPZ3_RS20725 4467492 4467650 + hypothetical protein gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20725 YPZ3_RS20730 YPZ3_3472 YPZ3_RS20730 4467729 4468310 + membrane protein gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20730 YPZ3_RS20735 YPZ3_3473 YPZ3_RS20735 4468324 4468656 - membrane protein gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20735 YPZ3_RS20740 YPZ3_3474 YPZ3_RS20740 4468945 4469409 + transposase gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20740 YPZ3_RS20745 YPZ3_3475 YPZ3_RS20745 4469416 4471368 - selenocysteine-specific translation elongation factor gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20745 YPZ3_RS20750 YPZ3_3476 YPZ3_RS20750 4471365 4472753 - L-seryl-tRNA(Sec) selenium transferase catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20750 YPZ3_RS20755 YPZ3_3477 YPZ3_RS20755 4472937 4473866 - protein FdhE required for the formation of active formate dehydrogenase gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20755 YPZ3_RS20760 YPZ3_3478 YPZ3_RS20760 4473866 4474540 - formate dehydrogenase-N subunit gamma cytochrome b556(FDO) component%3B heme containing gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20760 YPZ3_RS20765 YPZ3_3479 YPZ3_RS20765 4474537 4475508 - formate dehydrogenase-N subunit beta beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit) gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20765 YPZ3_RS20770 YPZ3_3480 YPZ3_RS20770 4475521 4477932 - formate dehydrogenase subunit alpha gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20770 YPZ3_RS20775 YPZ3_3481 YPZ3_RS20775 4477981 4478568 - sulfate ABC transporter substrate-binding protein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20775 YPZ3_RS20780 YPZ3_3482 YPZ3_RS20780 4478765 4479589 + protein FdhD gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20780 YPZ3_RS20785 YPZ3_3483 YPZ3_RS20785 4480025 4480648 + superoxide dismutase SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20785 YPZ3_RS20790 YPZ3_3484 YPZ3_RS20790 4480992 4482941 + chemotaxis protein gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20790 YPZ3_RS20795 YPZ3_3485 YPZ3_RS20795 4483131 4483463 + membrane protein gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20795 YPZ3_RS20800 YPZ3_3486 YPZ3_RS20800 4483995 4484471 + hypothetical protein gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20800 YPZ3_RS20805 YPZ3_3487 YPZ3_RS20805 4484640 4484996 - hypothetical protein gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20805 YPZ3_RS20810 YPZ3_3488 YPZ3_RS20810 4485245 4485799 - mannitol repressor protein gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20810 YPZ3_RS20815 YPZ3_3489 YPZ3_RS20815 4486006 4487169 - mannitol-1-phosphate 5-dehydrogenase gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20815 YPZ3_RS20820 YPZ3_3490 YPZ3_RS20820 4487306 4489237 - PTS mannitol transporter subunit IIABC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20820 YPZ3_RS20825 YPZ3_3491 YPZ3_RS20825 4489887 4490606 - hypothetical protein gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20825 YPZ3_RS20830 YPZ3_3492 glyS glyS 4491079 4493148 - glycine--tRNA ligase subunit beta glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20830 YPZ3_RS20835 YPZ3_3493 YPZ3_RS20835 4493158 4494072 - glycine--tRNA ligase subunit alpha gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20835 YPZ3_RS20840 YPZ3_3494 YPZ3_RS20840 4494400 4494972 + DNA-3-methyladenine glycosylase gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20840 YPZ3_RS20845 YPZ3_3495 YPZ3_RS20845 4494969 4495424 + acetyltransferase gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20845 YPZ3_RS20850 YPZ3_3496 YPZ3_RS20850 4495782 4496441 + hypothetical protein gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20850 YPZ3_RS20855 YPZ3_3497 YPZ3_RS20855 4496572 4497216 - transcriptional regulator gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20855 YPZ3_RS20860 YPZ3_3498 YPZ3_RS20860 4497735 4498715 + glyoxylate/hydroxypyruvate reductase B catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20860 YPZ3_RS20865 YPZ3_3499 malS malS 4499004 4501067 + alpha-amylase periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20865 YPZ3_RS20870 YPZ3_3500 YPZ3_RS20870 4501482 4501925 + membrane protein gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20870 YPZ3_RS20875 YPZ3_3501 avtA avtA 4502380 4503645 + valine--pyruvate aminotransferase transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20875 YPZ3_RS20880 YPZ3_3502 YPZ3_RS20880 4503758 4505416 - transporter gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20880 YPZ3_RS20885 YPZ3_3503 YPZ3_RS20885 4505789 4506253 - heat-shock protein IbpB gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20885 YPZ3_RS20890 YPZ3_3504 YPZ3_RS20890 4506534 4506947 - heat-shock protein IbpA with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20890 YPZ3_RS20895 YPZ3_3505 YPZ3_RS20895 4507315 4507653 + hypothetical protein gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20895 YPZ3_RS20900 YPZ3_3506 YPZ3_RS20900 4507693 4508007 - hypothetical protein gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20900 YPZ3_RS20905 YPZ3_3507 YPZ3_RS20905 4507997 4508308 - hypothetical protein gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20905 YPZ3_RS20910 YPZ3_3508 YPZ3_RS20910 4508516 4509478 + hypothetical protein gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20910 YPZ3_RS20915 YPZ3_3509 YPZ3_RS20915 4509472 4510425 + ornithine cyclodeaminase catalyzes the formation of L-proline from L-ornithine gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20915 YPZ3_RS20920 YPZ3_RS20920 YPZ3_RS20920 4510632 4511147 + transposase gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20920 YPZ3_RS20925 YPZ3_3511 YPZ3_RS20925 4511201 4511986 + integrase gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20925 YPZ3_RS20930 YPZ3_3512 YPZ3_RS20930 4512377 4513186 - sugar phosphate phosphatase YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20930 YPZ3_RS20935 YPZ3_3513 gyrB gyrB 4513402 4515816 - DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20935 YPZ3_RS20940 YPZ3_3514 recF recF 4515836 4516921 - DNA recombination protein RecF Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20940 YPZ3_RS20945 YPZ3_RS20945 YPZ3_RS20945 4516920 4517090 + recombinase F gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20945 YPZ3_RS20950 YPZ3_3515 YPZ3_RS20950 4517094 4518194 - DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20950 YPZ3_RS20955 YPZ3_3516 dnaA dnaA 4518199 4519587 - chromosomal replication initiator protein DnaA binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20955 YPZ3_RS20960 YPZ3_RS20960 rpmH rpmH 4520297 4520437 + 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20960 YPZ3_RS20965 YPZ3_RS20965 rnpA rnpA 4520456 4520815 + ribonuclease P protein component protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20965 YPZ3_RS20970 YPZ3_3517 YPZ3_RS20970 4521039 4522679 + protein translocase component YidC functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20970 YPZ3_RS20975 YPZ3_3518 trmE trmE 4522822 4524186 + tRNA modification GTPase MnmE in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20975 YPZ3_RS20980 YPZ3_3519 YPZ3_RS20980 4524372 4525571 + trans-2-enoyl-CoA reductase enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20980 YPZ3_RS20985 YPZ3_RS20985 YPZ3_RS20985 4526039 4526320 - membrane protein gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20985 YPZ3_RS20990 YPZ3_3520 YPZ3_RS20990 4526382 4527002 - membrane protein gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20990 YPZ3_RS20995 YPZ3_3521 YPZ3_RS20995 4527547 4528875 - adenine permease involved in the transport or adenine gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS20995 YPZ3_RS21000 YPZ3_3522 YPZ3_RS21000 4529368 4530036 + 6-phosphogluconate phosphatase gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21000 YPZ3_RS21005 YPZ3_3523 YPZ3_RS21005 4530071 4530826 - ABC transporter permease gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21005 YPZ3_RS21010 YPZ3_3524 YPZ3_RS21010 4530828 4531565 - ABC transporter permease gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21010 YPZ3_RS21015 YPZ3_3525 YPZ3_RS21015 4531748 4532602 - amino acid ABC transporter substrate-binding protein gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21015 YPZ3_RS21020 YPZ3_3526 YPZ3_RS21020 4532822 4533493 - membrane protein gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21020 YPZ3_RS21025 YPZ3_3527 YPZ3_RS21025 4533789 4534511 - transcriptional regulator regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21025 YPZ3_RS21030 YPZ3_3528 YPZ3_RS21030 4534599 4535375 - phosphate import ATP-binding protein PstB 2 gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21030 YPZ3_RS21035 YPZ3_3529 pstA pstA 4535456 4536343 - phosphate ABC transporter permease Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21035 YPZ3_RS21040 YPZ3_3530 pstC pstC 4536345 4537301 - phosphate transporter permease subunit PstC part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21040 YPZ3_RS21045 YPZ3_3531 YPZ3_RS21045 4537530 4538570 - phosphate ABC transporter substrate-binding protein gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21045 YPZ3_RS21050 YPZ3_3532 YPZ3_RS21050 4539053 4540882 - glutamine--fructose-6-phosphate aminotransferase [isomerizing] Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21050 YPZ3_RS21055 YPZ3_3533 glmU glmU 4541083 4542453 - bifunctional protein GlmU forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21055 YPZ3_RS21060 YPZ3_3534 atpC atpC 4543074 4543496 - ATP synthase epsilon chain part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21060 YPZ3_RS21065 YPZ3_3535 YPZ3_RS21065 4543518 4544900 - ATP synthase subunit beta gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21065 YPZ3_RS21070 YPZ3_3536 YPZ3_RS21070 4545056 4545919 - ATP synthase subunit gamma Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21070 YPZ3_RS21075 YPZ3_3537 YPZ3_RS21075 4545981 4547522 - ATP synthase subunit alpha produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21075 YPZ3_RS21080 YPZ3_3538 YPZ3_RS21080 4547537 4548070 - ATP synthase subunit delta Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21080 YPZ3_RS21085 YPZ3_3539 YPZ3_RS21085 4548085 4548555 - ATP synthase subunit b Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21085 YPZ3_RS21090 YPZ3_RS21090 YPZ3_RS21090 4548617 4548856 - ATP synthase subunit c Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21090 YPZ3_RS21095 YPZ3_3540 YPZ3_RS21095 4548906 4549730 - ATP synthase subunit a Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21095 YPZ3_RS21100 YPZ3_3541 YPZ3_RS21100 4549770 4550153 - F0F1 ATP synthase subunit I gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21100 YPZ3_RS21105 YPZ3_3542 gidB gidB 4550820 4551440 - ribosomal RNA small subunit methyltransferase G glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21105 YPZ3_RS21110 YPZ3_3543 YPZ3_RS21110 4551586 4553475 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21110 YPZ3_RS21130 YPZ3_pCD0001 YPZ3_RS21130 495 992 + transposase gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21130 YPZ3_RS21135 YPZ3_pCD0002 YPZ3_RS21135 1055 1447 - YopE regulator gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21135 YPZ3_RS21140 YPZ3_pCD0003 YPZ3_RS21140 1716 2300 + virulence protein YopE gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21140 YPZ3_RS21145 YPZ3_RS21145 YPZ3_RS21145 2440 2739 - plasmid stabilization protein gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21145 YPZ3_RS21150 YPZ3_RS21150 YPZ3_RS21150 2732 2974 - antitoxin ParD gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21150 YPZ3_RS21155 YPZ3_RS21155 YPZ3_RS21155 3821 4069 - hypothetical protein gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21155 YPZ3_RS21160 YPZ3_pCD0005 YPZ3_RS21160 4237 5202 - chromosome partitioning protein ParB gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21160 YPZ3_RS21165 YPZ3_pCD0006 YPZ3_RS21165 5199 6365 - chromosome partitioning protein ParA gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21165 YPZ3_RS21170 YPZ3_RS21170 YPZ3_RS21170 7165 7359 - transposase gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21170 YPZ3_RS21175 YPZ3_pCD0007 YPZ3_RS21175 7471 7929 - transposase gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21175 YPZ3_RS21180 YPZ3_pCD0008 YPZ3_RS21180 7953 8270 - transposase gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21180 YPZ3_RS21185 YPZ3_pCD0009 YPZ3_RS21185 8377 8994 - conjugal transfer protein TraT gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21185 YPZ3_RS21190 YPZ3_pCD0010 YPZ3_RS21190 9604 10152 - hypothetical protein gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21190 YPZ3_RS21195 YPZ3_pCD0011 YPZ3_RS21195 10652 11620 + cysteine protease gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21195 YPZ3_RS21200 YPZ3_pCD0012 YPZ3_RS21200 11620 12018 + chaperone protein SycT gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21200 YPZ3_RS21205 YPZ3_pCD0013 YPZ3_RS21205 12062 12373 - hypothetical protein gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21205 YPZ3_RS21210 YPZ3_pCD0014 YPZ3_RS21210 12723 13142 + hypothetical protein gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21210 YPZ3_RS21215 YPZ3_RS21215 YPZ3_RS21215 14120 14335 + transposase gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21215 YPZ3_RS21220 YPZ3_pCD0015 YPZ3_RS21220 14378 15607 - outer membrane protein YopM gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21220 YPZ3_RS21225 YPZ3_RS21225 YPZ3_RS21225 16001 16210 - hypothetical protein gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21225 YPZ3_RS21230 YPZ3_pCD0017 YPZ3_RS21230 17336 18256 - hypothetical protein gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21230 YPZ3_RS21235 YPZ3_pCD0018 YPZ3_RS21235 18275 19480 - hypothetical protein gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21235 YPZ3_RS21240 YPZ3_pCD0019 YPZ3_RS21240 19458 19964 - low calcium response locus protein H gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21240 YPZ3_RS21245 YPZ3_pCD0020 YPZ3_RS21245 19977 20957 - Virulence-associated V antigen gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21245 YPZ3_RS21250 YPZ3_RS21250 YPZ3_RS21250 20959 21246 - low calcium response locus protein G gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21250 YPZ3_RS21255 YPZ3_pCD0021 YPZ3_RS21255 21288 21728 - low calcium response locus protein R gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21255 YPZ3_RS21260 YPZ3_pCD0022 YPZ3_RS21260 21725 23839 - low calcium response locus protein D gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21260 YPZ3_RS21265 YPZ3_pCD0023 YPZ3_RS21265 23826 24164 - molecular chaperone gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21265 YPZ3_RS21270 YPZ3_pCD0024 YPZ3_RS21270 24167 24535 - translocation protein YopX gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21270 YPZ3_RS21275 YPZ3_pCD0025 YPZ3_RS21275 24532 24903 - chaperone protein SycN gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21275 YPZ3_RS21280 YPZ3_RS21280 YPZ3_RS21280 24890 25168 - protein TyeA gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21280 YPZ3_RS21285 YPZ3_pCD0026 YPZ3_RS21285 25149 26030 - outer membrane protein YopN gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21285 YPZ3_RS21290 YPZ3_pCD0027 fliI fliI 26228 27547 + ATP synthase involved in type III protein export during flagellum assembly gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21290 YPZ3_RS21295 YPZ3_pCD0028 YPZ3_RS21295 27544 28008 + translocation protein YopO gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21295 YPZ3_RS21300 YPZ3_pCD0029 YPZ3_RS21300 28008 29375 + translocation protein YopP gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21300 YPZ3_RS21305 YPZ3_pCD0030 YPZ3_RS21305 29372 30295 + translocation protein YopQ gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21305 YPZ3_RS21310 YPZ3_pCD0031 ssaR ssaR 30292 30945 + translocation protein YopR part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21310 YPZ3_RS21315 YPZ3_RS21315 YPZ3_RS21315 30947 31213 + translocation protein YopS gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21315 YPZ3_RS21320 YPZ3_pCD0032 YPZ3_RS21320 31210 31995 + translocation protein YopT gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21320 YPZ3_RS21325 YPZ3_pCD0033 YPZ3_RS21325 31995 33059 + translocation protein YopU gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21325 YPZ3_RS21330 YPZ3_pCD0034 YPZ3_RS21330 33635 34030 + type III secretion system chaperone VirG gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21330 YPZ3_RS21335 YPZ3_pCD0035 YPZ3_RS21335 34154 34969 + thermoregulatory protein LcrF gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21335 YPZ3_RS21340 YPZ3_RS21340 YPZ3_RS21340 35048 35146 + translocation protein YopA gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21340 YPZ3_RS21345 YPZ3_pCD0036 YPZ3_RS21345 35372 35785 + chaperone protein YscB gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21345 YPZ3_RS21350 YPZ3_pCD0037 YPZ3_RS21350 35791 37614 + secretin gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21350 YPZ3_RS21355 YPZ3_RS21355 YPZ3_RS21355 37611 38870 + preprotein translocase D gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21355 YPZ3_RS21360 YPZ3_RS21360 YPZ3_RS21360 38867 39067 + preprotein translocase SecE gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21360 YPZ3_RS21365 YPZ3_RS21365 YPZ3_RS21365 39068 39331 + type III export protein pscF gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21365 YPZ3_RS21370 YPZ3_pCD0040 YPZ3_RS21370 39333 39680 + preprotein translocase G gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21370 YPZ3_RS21375 YPZ3_pCD0041 YPZ3_RS21375 39677 40174 + translocation protein YopH gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21375 YPZ3_RS21380 YPZ3_pCD0042 YPZ3_RS21380 40184 40522 + preprotein translocase I gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21380 YPZ3_RS21385 YPZ3_pCD0043 YPZ3_RS21385 40529 41263 + translocation protein YopJ gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21385 YPZ3_RS21390 YPZ3_pCD0044 YPZ3_RS21390 41266 41892 + preprotein translocase K gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21390 YPZ3_RS21395 YPZ3_pCD0045 YPZ3_RS21395 41871 42503 + type III secretion system protein gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21395 YPZ3_RS21400 YPZ3_pCD0046 YPZ3_RS21400 42728 43075 + translocation protein YopM gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21400 YPZ3_RS21405 YPZ3_RS21405 YPZ3_RS21405 43623 43889 + low calcium response locus protein S gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21405 YPZ3_RS21410 YPZ3_pCD0047 YPZ3_RS21410 43925 44347 + low calcium response locus protein T gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21410 YPZ3_RS21415 YPZ3_pCD0048 YPZ3_RS21415 44365 44652 + integrase gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21415 YPZ3_RS21420 YPZ3_pCD0049 YPZ3_RS21420 45164 46570 - tyrosine-protein phosphatase YopH gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21420 YPZ3_RS21425 YPZ3_RS21425 YPZ3_RS21425 46853 47059 - transposase gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21425 YPZ3_RS21430 YPZ3_pCD0050 YPZ3_RS21430 47191 47667 + integrase gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21430 YPZ3_RS21435 YPZ3_pCD0051 YPZ3_RS21435 48253 49119 - effector protein YopJ gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21435 YPZ3_RS21440 YPZ3_pCD0052 YPZ3_RS21440 49515 51713 - protein kinase YpkA gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21440 YPZ3_RS21445 YPZ3_pCD0053 YPZ3_RS21445 51721 52170 - molecular chaperone Tir gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21445 YPZ3_RS21450 YPZ3_RS21450 YPZ3_RS21450 52466 52660 - transposase gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21450 YPZ3_RS21455 YPZ3_pCD0054 YPZ3_RS21455 54328 55194 - replication protein gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21455 YPZ3_RS21460 YPZ3_RS21460 YPZ3_RS21460 55187 55261 - RepA leader peptide Tap-containing protein acts to regulate the expression of the plasmid replication protein RepA in the IncFII plasmid group gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21460 YPZ3_RS21465 YPZ3_RS21465 YPZ3_RS21465 55503 55757 - replication protein gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21465 YPZ3_RS21470 YPZ3_RS21470 YPZ3_RS21470 55895 56143 - phospholipase gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21470 YPZ3_RS21475 YPZ3_pCD0055 YPZ3_RS21475 56560 56967 - transposase gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21475 YPZ3_RS21480 YPZ3_pCD0056 YPZ3_RS21480 56991 57308 - transposase gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21480 YPZ3_RS21485 YPZ3_pCD0057 YPZ3_RS21485 57480 57938 - DNA helicase TraI gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21485 YPZ3_RS21490 YPZ3_RS21490 YPZ3_RS21490 58007 58276 + transposase gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21490 YPZ3_RS21495 YPZ3_RS21495 YPZ3_RS21495 58273 58479 - hypothetical protein gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21495 YPZ3_RS21500 YPZ3_RS21500 YPZ3_RS21500 58602 59177 - adhesin gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21500 YPZ3_RS21505 YPZ3_RS21505 YPZ3_RS21505 59654 59905 - adhesin gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21505 YPZ3_RS21510 YPZ3_pCD0059 YPZ3_RS21510 60511 60891 + transposase gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21510 YPZ3_RS21515 YPZ3_pCD0060 YPZ3_RS21515 60888 63203 - transposase gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21515 YPZ3_RS21520 YPZ3_pCD0061 YPZ3_RS21520 63367 63918 + recombinase gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21520 YPZ3_RS21525 YPZ3_pCD0062 YPZ3_RS21525 63937 64401 + hypothetical protein gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21525 YPZ3_RS21530 YPZ3_pCD0063 YPZ3_RS21530 64540 64869 + hypothetical protein gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21530 YPZ3_RS21535 YPZ3_RS21535 YPZ3_RS21535 64969 65235 + transposase gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21535 YPZ3_RS21540 YPZ3_pCD0064 YPZ3_RS21540 65241 66068 + transposase gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21540 YPZ3_RS21545 YPZ3_pCD0065 YPZ3_RS21545 66216 66641 - yopH targeting protein gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21545 YPZ3_RS21550 YPZ3_pCD0066 YPZ3_RS21550 67017 67415 - AAA family ATPase gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21550 YPZ3_RS21555 YPZ3_RS21555 YPZ3_RS21555 67415 68587 - integrase gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21555 YPZ3_RS21560 YPZ3_pMT0001 YPZ3_RS21560 87 1109 + transposase gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21560 YPZ3_RS21565 YPZ3_pMT0002 YPZ3_RS21565 1109 1888 + transposase gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21565 YPZ3_RS21570 YPZ3_pMT0003 YPZ3_RS21570 2022 2630 - tail assembly protein gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21570 YPZ3_RS21575 YPZ3_RS21575 YPZ3_RS21575 2723 2935 - hypothetical protein gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21575 YPZ3_RS21580 YPZ3_pMT0004 YPZ3_RS21580 2932 5820 - phage tail protein gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21580 YPZ3_RS21585 YPZ3_pMT0005 YPZ3_RS21585 5901 6533 - hypothetical protein gene gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21585 YPZ3_RS21590 YPZ3_pMT0006 YPZ3_RS21590 6536 11167 - host specificity protein J gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21590 YPZ3_RS21595 YPZ3_pMT0007 YPZ3_RS21595 11189 11776 - phage tail protein gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21595 YPZ3_RS21600 YPZ3_pMT0008 YPZ3_RS21600 11764 12561 - tail protein gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21600 YPZ3_RS21605 YPZ3_pMT0009 YPZ3_RS21605 12554 13252 - tail protein gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21605 YPZ3_RS21610 YPZ3_pMT0010 YPZ3_RS21610 13342 13677 - tail protein gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21610 YPZ3_RS21615 YPZ3_pMT0011 YPZ3_RS21615 13719 18296 - phage tail tape measure protein gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21615 YPZ3_RS21620 YPZ3_RS21620 YPZ3_RS21620 18304 18537 - hypothetical protein gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21620 YPZ3_RS21630 YPZ3_pMT0012 YPZ3_RS21630 18654 18971 - hypothetical protein gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21630 YPZ3_RS21635 YPZ3_pMT0013 YPZ3_RS21635 19031 19777 - hypothetical protein gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21635 YPZ3_RS21640 YPZ3_pMT0014 YPZ3_RS21640 19852 20235 - hypothetical protein gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21640 YPZ3_RS21645 YPZ3_pMT0015 YPZ3_RS21645 20237 20710 - hypothetical protein gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21645 YPZ3_RS21650 YPZ3_pMT0016 YPZ3_RS21650 20701 21045 - hypothetical protein gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21650 YPZ3_RS21655 YPZ3_pMT0017 YPZ3_RS21655 21143 21976 - hypothetical protein gene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21655 YPZ3_RS21660 YPZ3_pMT0018 YPZ3_RS21660 21976 22410 - hypothetical protein gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21660 YPZ3_RS21665 YPZ3_pMT0019 YPZ3_RS21665 22454 23116 - hypothetical protein gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21665 YPZ3_RS21670 YPZ3_pMT0020 YPZ3_RS21670 23191 24066 - phage capsid protein gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21670 YPZ3_RS21675 YPZ3_pMT0021 YPZ3_RS21675 24093 24926 - hypothetical protein gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21675 YPZ3_RS21680 YPZ3_pMT0022 YPZ3_RS21680 24949 26523 - hypothetical protein gene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21680 YPZ3_RS21685 YPZ3_pMT0023 YPZ3_RS21685 26557 27813 - terminase gene gene4324 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21685 YPZ3_RS21690 YPZ3_pMT0024 YPZ3_RS21690 27816 28457 - DNA-binding protein gene gene4325 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21690 YPZ3_RS21695 YPZ3_RS21695 YPZ3_RS21695 28653 28919 - hypothetical protein gene gene4326 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21695 YPZ3_RS21700 YPZ3_pMT0025 YPZ3_RS21700 28929 29819 - hypothetical protein gene gene4327 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21700 YPZ3_RS21705 YPZ3_RS21705 YPZ3_RS21705 29825 30079 - hypothetical protein gene gene4328 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21705 YPZ3_RS21710 YPZ3_pMT0026 YPZ3_RS21710 30072 30710 - ABC transporter gene gene4329 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21710 YPZ3_RS21715 YPZ3_pMT0027 YPZ3_RS21715 30707 31375 - chromosome partitioning protein ParB gene gene4330 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21715 YPZ3_RS21720 YPZ3_pMT0028 YPZ3_RS21720 31375 32073 - chromosome partitioning protein ParB gene gene4331 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21720 YPZ3_RS21725 YPZ3_pMT0029 YPZ3_RS21725 32138 33697 + helicase gene gene4332 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21725 YPZ3_RS21730 YPZ3_RS21730 YPZ3_RS21730 33700 33978 + hypothetical protein gene gene4333 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21730 YPZ3_RS21735 YPZ3_pMT0030 YPZ3_RS21735 34038 34460 + hypothetical protein gene gene4334 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21735 YPZ3_RS21740 YPZ3_pMT0031 YPZ3_RS21740 34465 34992 + transcriptional regulator gene gene4335 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21740 YPZ3_RS21745 YPZ3_pMT0032 YPZ3_RS21745 35315 35965 + hypothetical protein gene gene4336 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21745 YPZ3_RS21750 YPZ3_RS21750 YPZ3_RS21750 36050 36277 + hypothetical protein gene gene4337 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21750 YPZ3_RS21755 YPZ3_RS21755 YPZ3_RS21755 36578 36937 + hypothetical protein gene gene4338 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21755 YPZ3_RS21760 YPZ3_pMT0033 YPZ3_RS21760 36916 37398 - hypothetical protein gene gene4339 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21760 YPZ3_RS21765 YPZ3_RS21765 YPZ3_RS21765 37411 37587 - hypothetical protein gene gene4340 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21765 YPZ3_RS21770 YPZ3_RS21770 YPZ3_RS21770 37604 37885 - ABC transporter gene gene4341 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21770 YPZ3_RS21775 YPZ3_pMT0034 YPZ3_RS21775 38085 38543 - transposase gene gene4342 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21775 YPZ3_RS21780 YPZ3_pMT0035 YPZ3_RS21780 38752 39321 - hypothetical protein gene gene4344 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21780 YPZ3_RS21785 YPZ3_pMT0036 YPZ3_RS21785 39334 40080 - hypothetical protein gene gene4345 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21785 YPZ3_RS21790 YPZ3_pMT0037 YPZ3_RS21790 40070 41986 - exonuclease gene gene4346 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21790 YPZ3_RS21795 YPZ3_RS21795 YPZ3_RS21795 41995 42219 - hypothetical protein gene gene4347 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21795 YPZ3_RS21800 YPZ3_pMT0038 YPZ3_RS21800 42216 43301 - exonuclease gene gene4348 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21800 YPZ3_RS21805 YPZ3_RS21805 YPZ3_RS21805 43450 43638 + membrane protein gene gene4349 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21805 YPZ3_RS21810 YPZ3_pMT0039 YPZ3_RS21810 43717 44739 + hypothetical protein gene gene4350 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21810 YPZ3_RS21815 YPZ3_RS21815 YPZ3_RS21815 44877 45023 - hypothetical protein gene gene4351 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21815 YPZ3_RS21820 YPZ3_pMT0040 YPZ3_RS21820 45099 45743 - hypothetical protein gene gene4352 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21820 YPZ3_RS21825 YPZ3_pMT0041 YPZ3_RS21825 46488 47552 + replication protein RepA gene gene4353 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21825 YPZ3_RS21830 YPZ3_RS21830 YPZ3_RS21830 48121 48333 - hypothetical protein gene gene4354 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21830 YPZ3_RS21835 YPZ3_pMT0042 YPZ3_RS21835 48333 48668 - hypothetical protein gene gene4355 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21835 YPZ3_RS21840 YPZ3_RS21840 YPZ3_RS21840 48665 48844 - membrane protein gene gene4356 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21840 YPZ3_RS21845 YPZ3_RS21845 YPZ3_RS21845 48885 49160 - hypothetical protein gene gene4357 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21845 YPZ3_RS21850 YPZ3_pMT0043 YPZ3_RS21850 49228 49638 - hypothetical protein gene gene4358 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21850 YPZ3_RS21855 YPZ3_pMT0044 YPZ3_RS21855 49622 49993 - hypothetical protein gene gene4359 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21855 YPZ3_RS21860 YPZ3_pMT0045 YPZ3_RS21860 50147 50977 - hypothetical protein gene gene4360 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21860 YPZ3_RS21865 YPZ3_RS21865 YPZ3_RS21865 50981 51181 - membrane protein gene gene4361 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21865 YPZ3_RS21870 YPZ3_pMT0046 YPZ3_RS21870 51272 52348 - recombinase gene gene4362 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21870 YPZ3_RS21875 YPZ3_RS21875 YPZ3_RS21875 52351 52617 - hypothetical protein gene gene4363 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21875 YPZ3_RS21880 YPZ3_pMT0047 YPZ3_RS21880 52617 53561 - exonuclease gene gene4364 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21880 YPZ3_RS21885 YPZ3_pMT0048 YPZ3_RS21885 53622 54650 - regulator gene gene4365 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21885 YPZ3_RS21890 YPZ3_pMT0049 YPZ3_RS21890 54770 55201 - hypothetical protein gene gene4366 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21890 YPZ3_RS21895 YPZ3_RS21895 YPZ3_RS21895 55422 55673 + hypothetical protein gene gene4367 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21895 YPZ3_RS21900 YPZ3_pMT0050 YPZ3_RS21900 55746 56309 + DNA-binding protein gene gene4368 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21900 YPZ3_RS21905 YPZ3_pMT0051 YPZ3_RS21905 56339 56782 - hypothetical protein gene gene4369 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21905 YPZ3_RS21910 YPZ3_pMT0052 YPZ3_RS21910 56779 60303 - DNA polymerase III subunit alpha gene gene4370 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21910 YPZ3_RS21915 YPZ3_pMT0053 YPZ3_RS21915 60484 61719 - porphyrin biosynthesis protein gene gene4371 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21915 YPZ3_RS21920 YPZ3_pMT0054 YPZ3_RS21920 61816 64182 - porphyrin biosynthesis protein gene gene4372 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21920 YPZ3_RS21925 YPZ3_RS21925 YPZ3_RS21925 64292 64504 - hypothetical protein gene gene4373 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21925 YPZ3_RS21930 YPZ3_pMT0055 YPZ3_RS21930 64767 65153 + hypothetical protein gene gene4374 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21930 YPZ3_RS21935 YPZ3_pMT0056 YPZ3_RS21935 65148 66251 - integrase gene gene4375 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21935 YPZ3_RS21940 YPZ3_pMT0057 YPZ3_RS21940 67011 67523 - F1 capsule antigen gene gene4376 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21940 YPZ3_RS21945 YPZ3_pMT0058 YPZ3_RS21945 67604 70105 - F1 capsule-anchoring protein gene gene4377 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21945 YPZ3_RS21950 YPZ3_pMT0059 YPZ3_RS21950 70130 70906 - chaperone protein caf1M gene gene4378 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21950 YPZ3_RS21955 YPZ3_pMT0060 YPZ3_RS21955 71234 72139 + F1 operon positive regulatory protein gene gene4379 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21955 YPZ3_RS21960 YPZ3_pMT0061 YPZ3_RS21960 72488 73696 + transposase gene gene4380 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21960 YPZ3_RS21965 YPZ3_RS21965 YPZ3_RS21965 73826 74005 + DNA helicase gene gene4381 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21965 YPZ3_RS21970 YPZ3_pMT0062 YPZ3_RS21970 74165 75187 + transposase gene gene4382 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21970 YPZ3_RS21975 YPZ3_pMT0063 YPZ3_RS21975 75386 75703 - transposase gene gene4383 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21975 YPZ3_RS21980 YPZ3_RS21980 YPZ3_RS21980 75883 76254 - hypothetical protein gene gene4384 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21980 YPZ3_RS21985 YPZ3_RS21985 YPZ3_RS21985 76169 76477 - hypothetical protein gene gene4385 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21985 YPZ3_RS21990 YPZ3_pMT0064 YPZ3_RS21990 76563 77018 + reverse transcriptase gene gene4386 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21990 YPZ3_RS21995 YPZ3_pMT0065 YPZ3_RS21995 77263 79026 - phospholipase D gene gene4387 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS21995 YPZ3_RS22000 YPZ3_pMT0066 YPZ3_RS22000 79104 79592 - phospholipase D gene gene4388 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22000 YPZ3_RS22005 YPZ3_RS22005 YPZ3_RS22005 80331 80606 + hypothetical protein gene gene4389 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22005 YPZ3_RS22010 YPZ3_pMT0067 YPZ3_RS22010 80629 81570 - hypothetical protein gene gene4390 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22010 YPZ3_RS22015 YPZ3_pMT0068 YPZ3_RS22015 81636 82256 - serine recombinase gene gene4391 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22015 YPZ3_RS22020 YPZ3_RS22020 YPZ3_RS22020 82456 82782 - plasmid stabilization protein gene gene4392 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22020 YPZ3_RS22025 YPZ3_RS22025 YPZ3_RS22025 82782 83009 - prevent-host-death protein gene gene4393 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22025 YPZ3_RS22030 YPZ3_pMT0069 YPZ3_RS22030 83311 84516 + chromosome partitioning protein ParA gene gene4394 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22030 YPZ3_RS22035 YPZ3_pMT0070 YPZ3_RS22035 84513 85484 + chromosome partitioning protein ParB gene gene4395 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22035 YPZ3_RS22040 YPZ3_pMT0071 YPZ3_RS22040 85863 87260 + DNA-binding protein gene gene4396 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22040 YPZ3_RS22045 YPZ3_RS22045 YPZ3_RS22045 87422 87622 - hypothetical protein gene gene4397 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22045 YPZ3_RS22050 YPZ3_pMT0072 YPZ3_RS22050 88123 88800 + methylase gene gene4398 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22050 YPZ3_RS22055 YPZ3_RS22055 YPZ3_RS22055 88800 89021 + hypothetical protein gene gene4399 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22055 YPZ3_RS22060 YPZ3_pMT0073 YPZ3_RS22060 89032 89451 + hypothetical protein gene gene4400 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22060 YPZ3_RS22065 YPZ3_pMT0074 YPZ3_RS22065 89505 90284 + hypothetical protein gene gene4401 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22065 YPZ3_RS22070 YPZ3_pMT0075 YPZ3_RS22070 90683 91189 + antirestriction protein gene gene4402 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22070 YPZ3_RS22075 YPZ3_RS22075 YPZ3_RS22075 91902 92132 + hypothetical protein gene gene4403 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22075 YPZ3_RS22080 YPZ3_pMT0076 YPZ3_RS22080 92205 94214 + hypothetical protein gene gene4404 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22080 YPZ3_RS22090 YPZ3_pPCP0001 YPZ3_RS22090 87 1109 + transposase gene gene4405 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22090 YPZ3_RS22095 YPZ3_pPCP0002 YPZ3_RS22095 1109 1888 + transposase gene gene4406 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22095 YPZ3_RS22100 YPZ3_RS22100 YPZ3_RS22100 2925 3119 + rop protein gene gene4407 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22100 YPZ3_RS22105 YPZ3_RS22105 YPZ3_RS22105 4355 4780 + pesticin immunity protein gene gene4408 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22105 YPZ3_RS22110 YPZ3_pPCP0005 YPZ3_RS22110 4815 5888 - peptidase gene gene4409 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22110 YPZ3_RS22115 YPZ3_RS22115 YPZ3_RS22115 6116 6421 + hypothetical protein gene gene4410 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22115 YPZ3_RS22120 YPZ3_pPCP0007 YPZ3_RS22120 6664 7602 + coagulase/fibrinolysin gene gene4411 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22120 YPZ3_RS22125 YPZ3_RS22125 YPZ3_RS22125 7789 8088 - transcriptional regulator gene gene4412 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22125 YPZ3_RS22130 YPZ3_pPCP0008 YPZ3_RS22130 8088 8429 - toxin RelE gene gene4413 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22130 YPZ3_RS22135 YPZ3_RS22135 YPZ3_RS22135 9132 9347 - hypothetical protein gene gene4414 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22135 YPZ3_RS22140 YPZ3_RS22140 YPZ3_RS22140 17553 17783 + hypothetical protein gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22140 YPZ3_RS22145 YPZ3_RS22145 YPZ3_RS22145 491133 491330 + membrane protein gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22145 YPZ3_RS22150 YPZ3_RS22150 YPZ3_RS22150 1388059 1388259 + hypothetical protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22150 YPZ3_RS22155 YPZ3_RS22155 YPZ3_RS22155 1388293 1388619 + hypothetical protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22155 YPZ3_RS22160 YPZ3_RS22160 YPZ3_RS22160 1388760 1388996 + hypothetical protein gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22160 YPZ3_RS22165 YPZ3_RS22165 YPZ3_RS22165 3742279 3742422 - gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22165 YPZ3_RS22170 YPZ3_RS22170 YPZ3_RS22170 4227522 4227752 - hypothetical protein gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22170 YPZ3_RS22175 YPZ3_RS22175 YPZ3_RS22175 4430388 4430599 + hypothetical protein gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22175 YPZ3_RS22180 YPZ3_RS22180 YPZ3_RS22180 4129343 4129721 + bacterial RNase P ncRNA gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22180 YPZ3_RS22185 YPZ3_RS22185 YPZ3_RS22185 38553 38676 - Hfq binding sRNA ncRNA gene4343 http://www.ncbi.nlm.nih.gov/gene/?term=YPZ3_RS22185