##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2284v1 #!genome-build-accession NCBI_Assembly:GCF_000022845.1 ##sequence-region NC_014029.1 1 4553586 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637386 NC_014029.1 RefSeq region 1 4553586 . + . ID=id0;Dbxref=taxon:637386;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=Z176003 NC_014029.1 RefSeq gene 270 710 . - . ID=gene0;Name=YPZ3_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00005;old_locus_tag=YPZ3_0001 NC_014029.1 Protein Homology CDS 270 710 . - 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_002212258.1;Name=WP_002212258.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NC_014029.1 RefSeq gene 803 1264 . - . ID=gene1;Name=YPZ3_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00010;old_locus_tag=YPZ3_0002 NC_014029.1 Protein Homology CDS 803 1264 . - 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11 NC_014029.1 RefSeq gene 1434 2426 . + . ID=gene2;Name=YPZ3_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00015;old_locus_tag=YPZ3_0003 NC_014029.1 Protein Homology CDS 1434 2426 . + 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NC_014029.1 RefSeq gene 2525 3991 . - . ID=gene3;Name=YPZ3_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00020;old_locus_tag=YPZ3_0004 NC_014029.1 Protein Homology CDS 2525 3991 . - 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_002212255.1;Name=WP_002212255.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_002212255.1;transl_table=11 NC_014029.1 RefSeq gene 3995 5548 . - . ID=gene4;Name=YPZ3_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00025;old_locus_tag=YPZ3_0005 NC_014029.1 Protein Homology CDS 3995 5548 . - 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_002212254.1;Name=WP_002212254.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase RavA;protein_id=WP_002212254.1;transl_table=11 NC_014029.1 RefSeq gene 5822 7690 . + . ID=gene5;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=YPZ3_RS00030;old_locus_tag=YPZ3_0006 NC_014029.1 Protein Homology CDS 5822 7690 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_002212253.1;Name=WP_002212253.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_002212253.1;transl_table=11 NC_014029.1 RefSeq gene 7895 8314 . + . ID=gene6;Name=YPZ3_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00035;old_locus_tag=YPZ3_0007 NC_014029.1 Protein Homology CDS 7895 8314 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NC_014029.1 RefSeq gene 8365 9291 . + . ID=gene7;Name=YPZ3_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00040;old_locus_tag=YPZ3_0008 NC_014029.1 Protein Homology CDS 8365 9291 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_002212251.1;Name=WP_002212251.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NC_014029.1 RefSeq gene 9344 9514 . + . ID=gene8;Name=YPZ3_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00045 NC_014029.1 Protein Homology CDS 9344 9514 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11 NC_014029.1 RefSeq gene 9511 10935 . - . ID=gene9;Name=YPZ3_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00050;old_locus_tag=YPZ3_0009 NC_014029.1 Protein Homology CDS 9511 10935 . - 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_002212250.1;Name=WP_002212250.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002212250.1;transl_table=11 NC_014029.1 RefSeq gene 11015 11704 . - . ID=gene10;Name=YPZ3_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00055;old_locus_tag=YPZ3_0010 NC_014029.1 Protein Homology CDS 11015 11704 . - 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NC_014029.1 RefSeq repeat_region 11815 17485 . + . ID=id1;gbkey=repeat_region NC_014029.1 RefSeq gene 12261 13809 . + . ID=gene11;Name=YPZ3_RS00065;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS00065;old_locus_tag=YPZ3_r1 NC_014029.1 RefSeq rRNA 12261 13809 . + . ID=rna0;Parent=gene11;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq exon 12261 13809 . + . ID=id2;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq gene 13943 14018 . + . ID=gene12;Name=YPZ3_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS00070;old_locus_tag=YPZ3_t1 NC_014029.1 tRNAscan-SE tRNA 13943 14018 . + . ID=rna1;Parent=gene12;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu NC_014029.1 tRNAscan-SE exon 13943 14018 . + . ID=id3;Parent=rna1;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu NC_014029.1 RefSeq gene 14262 17195 . + . ID=gene13;Name=YPZ3_RS00075;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS00075;old_locus_tag=YPZ3_r2 NC_014029.1 RefSeq rRNA 14262 17195 . + . ID=rna2;Parent=gene13;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq exon 14262 17195 . + . ID=id4;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq gene 17287 17402 . + . ID=gene14;Name=YPZ3_RS00080;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS00080;old_locus_tag=YPZ3_r3 NC_014029.1 cmsearch rRNA 17287 17402 . + . ID=rna3;Parent=gene14;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 cmsearch exon 17287 17402 . + . ID=id5;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 RefSeq gene 17553 17783 . + . ID=gene15;Name=YPZ3_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22140 NC_014029.1 Protein Homology CDS 17553 17783 . + 0 ID=cds11;Parent=gene15;Dbxref=Genbank:WP_025473721.1;Name=WP_025473721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025473721.1;transl_table=11 NC_014029.1 RefSeq repeat_region 17831 19150 . + . ID=id6;gbkey=repeat_region NC_014029.1 RefSeq gene 17905 19113 . + . ID=gene16;Name=YPZ3_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00085;old_locus_tag=YPZ3_0011 NC_014029.1 Protein Homology CDS 17905 19113 . + 0 ID=cds12;Parent=gene16;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 19171 19701 . - . ID=gene17;Name=YPZ3_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00090;old_locus_tag=YPZ3_0012 NC_014029.1 Protein Homology CDS 19171 19701 . - 0 ID=cds13;Parent=gene17;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11 NC_014029.1 RefSeq gene 19701 20288 . - . ID=gene18;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YPZ3_RS00095;old_locus_tag=YPZ3_0013 NC_014029.1 Protein Homology CDS 19701 20288 . - 0 ID=cds14;Parent=gene18;Dbxref=Genbank:WP_002213171.1;Name=WP_002213171.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdenum cofactor guanylyltransferase;protein_id=WP_002213171.1;transl_table=11 NC_014029.1 RefSeq gene 20442 20711 . + . ID=gene19;Name=YPZ3_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00100 NC_014029.1 Protein Homology CDS 20442 20711 . + 0 ID=cds15;Parent=gene19;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11 NC_014029.1 RefSeq gene 20791 21777 . + . ID=gene20;Name=YPZ3_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00105;old_locus_tag=YPZ3_0014 NC_014029.1 Protein Homology CDS 20791 21777 . + 0 ID=cds16;Parent=gene20;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NC_014029.1 RefSeq gene 21805 22428 . + . ID=gene21;Name=YPZ3_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00110;old_locus_tag=YPZ3_0015 NC_014029.1 Protein Homology CDS 21805 22428 . + 0 ID=cds17;Parent=gene21;Dbxref=Genbank:WP_002213168.1;Name=WP_002213168.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NC_014029.1 RefSeq gene 22920 25718 . + . ID=gene22;Name=YPZ3_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00115;old_locus_tag=YPZ3_0016 NC_014029.1 Protein Homology CDS 22920 25718 . + 0 ID=cds18;Parent=gene22;Dbxref=Genbank:WP_002213164.1;Name=WP_002213164.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_002213164.1;transl_table=11 NC_014029.1 RefSeq repeat_region 25977 26699 . + . ID=id7;gbkey=repeat_region NC_014029.1 RefSeq gene 25982 26137 . + . ID=gene23;Name=YPZ3_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00120 NC_014029.1 Protein Homology CDS 25982 26137 . + 0 ID=cds19;Parent=gene23;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 26127 26585 . + . ID=gene24;Name=YPZ3_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00125;old_locus_tag=YPZ3_0017 NC_014029.1 Protein Homology CDS 26127 26585 . + 0 ID=cds20;Parent=gene24;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 26837 27487 . - . ID=gene25;Name=YPZ3_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00130;old_locus_tag=YPZ3_0018 NC_014029.1 Protein Homology CDS 26837 27487 . - 0 ID=cds21;Parent=gene25;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11 NC_014029.1 RefSeq gene 28232 28798 . + . ID=gene26;Name=YPZ3_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00135;old_locus_tag=YPZ3_0019 NC_014029.1 Protein Homology CDS 28232 28798 . + 0 ID=cds22;Parent=gene26;Dbxref=Genbank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NC_014029.1 RefSeq gene 28981 30354 . + . ID=gene27;Name=YPZ3_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00140;old_locus_tag=YPZ3_0020 NC_014029.1 Protein Homology CDS 28981 30354 . + 0 ID=cds23;Parent=gene27;Dbxref=Genbank:WP_002213155.1;Name=WP_002213155.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NC_014029.1 RefSeq gene 30408 31820 . - . ID=gene28;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YPZ3_RS00145;old_locus_tag=YPZ3_0021 NC_014029.1 Protein Homology CDS 30408 31820 . - 0 ID=cds24;Parent=gene28;Dbxref=Genbank:WP_002213152.1;Name=WP_002213152.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_002213152.1;transl_table=11 NC_014029.1 RefSeq gene 31828 32877 . - . ID=gene29;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YPZ3_RS00150;old_locus_tag=YPZ3_0022 NC_014029.1 Protein Homology CDS 31828 32877 . - 0 ID=cds25;Parent=gene29;Dbxref=Genbank:WP_002213151.1;Name=WP_002213151.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_002213151.1;transl_table=11 NC_014029.1 RefSeq gene 33130 34539 . - . ID=gene30;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YPZ3_RS00155;old_locus_tag=YPZ3_0023 NC_014029.1 Protein Homology CDS 33130 34539 . - 0 ID=cds26;Parent=gene30;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11 NC_014029.1 RefSeq gene 34725 34856 . - . ID=gene31;Name=YPZ3_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00160 NC_014029.1 Protein Homology CDS 34725 34856 . - 0 ID=cds27;Parent=gene31;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11 NC_014029.1 RefSeq gene 35101 36924 . + . ID=gene32;Name=YPZ3_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00165;old_locus_tag=YPZ3_0024 NC_014029.1 Protein Homology CDS 35101 36924 . + 0 ID=cds28;Parent=gene32;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11 NC_014029.1 RefSeq gene 37246 37836 . + . ID=gene33;Name=YPZ3_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00170;old_locus_tag=YPZ3_0025 NC_014029.1 Protein Homology CDS 37246 37836 . + 0 ID=cds29;Parent=gene33;Dbxref=Genbank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;product=phosphatase;protein_id=WP_002209011.1;transl_table=11 NC_014029.1 RefSeq gene 37933 38817 . + . ID=gene34;Name=YPZ3_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00175;old_locus_tag=YPZ3_0026 NC_014029.1 Protein Homology CDS 37933 38817 . + 0 ID=cds30;Parent=gene34;Dbxref=Genbank:WP_002209010.1;Name=WP_002209010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209010.1;transl_table=11 NC_014029.1 RefSeq gene 38824 39261 . + . ID=gene35;Name=YPZ3_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00180;old_locus_tag=YPZ3_0027 NC_014029.1 Protein Homology CDS 38824 39261 . + 0 ID=cds31;Parent=gene35;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NC_014029.1 RefSeq repeat_region 39267 41224 . + . ID=id8;gbkey=repeat_region NC_014029.1 RefSeq gene 39335 40114 . - . ID=gene36;Name=YPZ3_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00185;old_locus_tag=YPZ3_0028 NC_014029.1 Protein Homology CDS 39335 40114 . - 0 ID=cds32;Parent=gene36;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 40114 41136 . - . ID=gene37;Name=YPZ3_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00190;old_locus_tag=YPZ3_0029 NC_014029.1 Protein Homology CDS 40114 41136 . - 0 ID=cds33;Parent=gene37;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 41406 42329 . + . ID=gene38;Name=YPZ3_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00195;old_locus_tag=YPZ3_0030 NC_014029.1 Protein Homology CDS 41406 42329 . + 0 ID=cds34;Parent=gene38;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11 NC_014029.1 RefSeq gene 42464 44173 . - . ID=gene39;Name=YPZ3_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00200;old_locus_tag=YPZ3_0031 NC_014029.1 Protein Homology CDS 42464 44173 . - 0 ID=cds35;Parent=gene39;Dbxref=Genbank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209007.1;transl_table=11 NC_014029.1 RefSeq gene 44321 45706 . - . ID=gene40;Name=YPZ3_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00205;old_locus_tag=YPZ3_0032 NC_014029.1 Protein Homology CDS 44321 45706 . - 0 ID=cds36;Parent=gene40;Dbxref=Genbank:WP_002209006.1;Name=WP_002209006.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease;protein_id=WP_002209006.1;transl_table=11 NC_014029.1 RefSeq gene 45944 47158 . + . ID=gene41;Name=YPZ3_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00210;old_locus_tag=YPZ3_0033 NC_014029.1 Protein Homology CDS 45944 47158 . + 0 ID=cds37;Parent=gene41;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11 NC_014029.1 RefSeq repeat_region 47256 47435 . + . ID=id9;gbkey=repeat_region NC_014029.1 RefSeq gene 47524 49605 . - . ID=gene42;Name=YPZ3_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00215;old_locus_tag=YPZ3_0034 NC_014029.1 Protein Homology CDS 47524 49605 . - 0 ID=cds38;Parent=gene42;Dbxref=Genbank:WP_002209004.1;Name=WP_002209004.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NC_014029.1 RefSeq gene 49606 50265 . - . ID=gene43;Name=YPZ3_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00220;old_locus_tag=YPZ3_0035 NC_014029.1 Protein Homology CDS 49606 50265 . - 0 ID=cds39;Parent=gene43;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11 NC_014029.1 RefSeq gene 50304 52412 . - . ID=gene44;Name=YPZ3_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00225;old_locus_tag=YPZ3_0036 NC_014029.1 Protein Homology CDS 50304 52412 . - 0 ID=cds40;Parent=gene44;Dbxref=Genbank:WP_002209002.1;Name=WP_002209002.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NC_014029.1 RefSeq gene 52432 52707 . - . ID=gene45;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YPZ3_RS00230 NC_014029.1 Protein Homology CDS 52432 52707 . - 0 ID=cds41;Parent=gene45;Dbxref=Genbank:WP_002209001.1;Name=WP_002209001.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002209001.1;transl_table=11 NC_014029.1 RefSeq gene 52762 53385 . - . ID=gene46;Name=YPZ3_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00235;old_locus_tag=YPZ3_0037 NC_014029.1 Protein Homology CDS 52762 53385 . - 0 ID=cds42;Parent=gene46;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NC_014029.1 RefSeq gene 53786 55489 . + . ID=gene47;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=YPZ3_RS00240;old_locus_tag=YPZ3_0038 NC_014029.1 Protein Homology CDS 53786 55489 . + 0 ID=cds43;Parent=gene47;Dbxref=Genbank:WP_002215674.1;Name=WP_002215674.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_002215674.1;transl_table=11 NC_014029.1 RefSeq gene 55502 56125 . - . ID=gene48;Name=YPZ3_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00245;old_locus_tag=YPZ3_0039 NC_014029.1 Protein Homology CDS 55502 56125 . - 0 ID=cds44;Parent=gene48;Dbxref=Genbank:WP_002215676.1;Name=WP_002215676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215676.1;transl_table=11 NC_014029.1 RefSeq gene 56528 57391 . - . ID=gene49;Name=YPZ3_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00250;old_locus_tag=YPZ3_0040 NC_014029.1 Protein Homology CDS 56528 57391 . - 0 ID=cds45;Parent=gene49;Dbxref=Genbank:WP_002208998.1;Name=WP_002208998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208998.1;transl_table=11 NC_014029.1 RefSeq gene 57518 58234 . + . ID=gene50;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YPZ3_RS00255;old_locus_tag=YPZ3_0041 NC_014029.1 Protein Homology CDS 57518 58234 . + 0 ID=cds46;Parent=gene50;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NC_014029.1 RefSeq gene 58401 59048 . + . ID=gene51;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YPZ3_RS00260;old_locus_tag=YPZ3_0042 NC_014029.1 Protein Homology CDS 58401 59048 . + 0 ID=cds47;Parent=gene51;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NC_014029.1 RefSeq gene 59183 59779 . - . ID=gene52;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=YPZ3_RS00265;old_locus_tag=YPZ3_0043 NC_014029.1 Protein Homology CDS 59183 59779 . - 0 ID=cds48;Parent=gene52;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NC_014029.1 RefSeq gene 59901 60359 . - . ID=gene53;Name=YPZ3_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00270;old_locus_tag=YPZ3_0044 NC_014029.1 Protein Homology CDS 59901 60359 . - 0 ID=cds49;Parent=gene53;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11 NC_014029.1 RefSeq gene 60337 61554 . - . ID=gene54;Name=YPZ3_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00275;old_locus_tag=YPZ3_0045 NC_014029.1 Protein Homology CDS 60337 61554 . - 0 ID=cds50;Parent=gene54;Dbxref=Genbank:WP_002208993.1;Name=WP_002208993.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002208993.1;transl_table=11 NC_014029.1 RefSeq gene 61748 62416 . + . ID=gene55;Name=YPZ3_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00280;old_locus_tag=YPZ3_0046 NC_014029.1 Protein Homology CDS 61748 62416 . + 0 ID=cds51;Parent=gene55;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11 NC_014029.1 RefSeq gene 62679 62915 . + . ID=gene56;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YPZ3_RS00285 NC_014029.1 Protein Homology CDS 62679 62915 . + 0 ID=cds52;Parent=gene56;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NC_014029.1 RefSeq gene 62927 63094 . + . ID=gene57;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YPZ3_RS00290 NC_014029.1 Protein Homology CDS 62927 63094 . + 0 ID=cds53;Parent=gene57;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NC_014029.1 RefSeq gene 63177 63986 . + . ID=gene58;Name=YPZ3_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00295;old_locus_tag=YPZ3_0047 NC_014029.1 Protein Homology CDS 63177 63986 . + 0 ID=cds54;Parent=gene58;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11 NC_014029.1 RefSeq gene 63992 64471 . - . ID=gene59;Name=YPZ3_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00300;old_locus_tag=YPZ3_0048 NC_014029.1 Protein Homology CDS 63992 64471 . - 0 ID=cds55;Parent=gene59;Dbxref=Genbank:WP_002208988.1;Name=WP_002208988.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_002208988.1;transl_table=11 NC_014029.1 RefSeq gene 64468 65250 . - . ID=gene60;Name=YPZ3_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00305;old_locus_tag=YPZ3_0049 NC_014029.1 Protein Homology CDS 64468 65250 . - 0 ID=cds56;Parent=gene60;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11 NC_014029.1 RefSeq gene 65251 66528 . - . ID=gene61;Name=YPZ3_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00310;old_locus_tag=YPZ3_0050 NC_014029.1 Protein Homology CDS 65251 66528 . - 0 ID=cds57;Parent=gene61;Dbxref=Genbank:WP_002208986.1;Name=WP_002208986.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NC_014029.1 RefSeq gene 66948 67913 . - . ID=gene62;Name=YPZ3_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00315;old_locus_tag=YPZ3_0051 NC_014029.1 Protein Homology CDS 66948 67913 . - 0 ID=cds58;Parent=gene62;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11 NC_014029.1 RefSeq gene 67913 68977 . - . ID=gene63;Name=YPZ3_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00320;old_locus_tag=YPZ3_0052 NC_014029.1 Protein Homology CDS 67913 68977 . - 0 ID=cds59;Parent=gene63;Dbxref=Genbank:WP_002208984.1;Name=WP_002208984.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208984.1;transl_table=11 NC_014029.1 RefSeq gene 69008 69940 . - . ID=gene64;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YPZ3_RS00325;old_locus_tag=YPZ3_0053 NC_014029.1 Protein Homology CDS 69008 69940 . - 0 ID=cds60;Parent=gene64;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11 NC_014029.1 RefSeq gene 70186 71397 . + . ID=gene65;Name=YPZ3_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00330;old_locus_tag=YPZ3_0054 NC_014029.1 Protein Homology CDS 70186 71397 . + 0 ID=cds61;Parent=gene65;Dbxref=Genbank:WP_002208982.1;Name=WP_002208982.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_002208982.1;transl_table=11 NC_014029.1 RefSeq gene 71407 72432 . + . ID=gene66;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YPZ3_RS00335;old_locus_tag=YPZ3_0055 NC_014029.1 Protein Homology CDS 71407 72432 . + 0 ID=cds62;Parent=gene66;Dbxref=Genbank:WP_002208981.1;Name=WP_002208981.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_002208981.1;transl_table=11 NC_014029.1 RefSeq gene 72570 73504 . - . ID=gene67;Name=YPZ3_RS00340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS00340;pseudo=true NC_014029.1 Protein Homology CDS 72570 73504 . - 0 ID=cds63;Parent=gene67;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar deacetylase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 73528 74898 . - . ID=gene68;Name=YPZ3_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00345;old_locus_tag=YPZ3_0058 NC_014029.1 Protein Homology CDS 73528 74898 . - 0 ID=cds64;Parent=gene68;Dbxref=Genbank:WP_002208980.1;Name=WP_002208980.1;gbkey=CDS;product=peptidase M37;protein_id=WP_002208980.1;transl_table=11 NC_014029.1 RefSeq gene 74908 76455 . - . ID=gene69;Name=YPZ3_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00350;old_locus_tag=YPZ3_0059 NC_014029.1 Protein Homology CDS 74908 76455 . - 0 ID=cds65;Parent=gene69;Dbxref=Genbank:WP_002208979.1;Name=WP_002208979.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002208979.1;transl_table=11 NC_014029.1 RefSeq gene 76852 77286 . + . ID=gene70;Name=YPZ3_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00355;old_locus_tag=YPZ3_0060 NC_014029.1 Protein Homology CDS 76852 77286 . + 0 ID=cds66;Parent=gene70;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11 NC_014029.1 RefSeq gene 77405 77653 . + . ID=gene71;Name=YPZ3_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00360 NC_014029.1 Protein Homology CDS 77405 77653 . + 0 ID=cds67;Parent=gene71;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11 NC_014029.1 RefSeq gene 77741 78217 . + . ID=gene72;Name=YPZ3_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00365;old_locus_tag=YPZ3_0061 NC_014029.1 Protein Homology CDS 77741 78217 . + 0 ID=cds68;Parent=gene72;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11 NC_014029.1 RefSeq gene 78217 79236 . + . ID=gene73;Name=YPZ3_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00370;old_locus_tag=YPZ3_0062 NC_014029.1 Protein Homology CDS 78217 79236 . + 0 ID=cds69;Parent=gene73;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11 NC_014029.1 RefSeq gene 79296 79436 . + . ID=gene74;Name=YPZ3_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00375 NC_014029.1 Protein Homology CDS 79296 79436 . + 0 ID=cds70;Parent=gene74;Dbxref=Genbank:WP_002228146.1;Name=WP_002228146.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228146.1;transl_table=11 NC_014029.1 RefSeq gene 79502 80323 . + . ID=gene75;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YPZ3_RS00380;old_locus_tag=YPZ3_0063 NC_014029.1 Protein Homology CDS 79502 80323 . + 0 ID=cds71;Parent=gene75;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NC_014029.1 RefSeq gene 80446 80934 . - . ID=gene76;Name=YPZ3_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00385;old_locus_tag=YPZ3_0064 NC_014029.1 Protein Homology CDS 80446 80934 . - 0 ID=cds72;Parent=gene76;Dbxref=Genbank:WP_002208973.1;Name=WP_002208973.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_002208973.1;transl_table=11 NC_014029.1 RefSeq gene 81123 82187 . + . ID=gene77;Name=YPZ3_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00390;old_locus_tag=YPZ3_0065 NC_014029.1 Protein Homology CDS 81123 82187 . + 0 ID=cds73;Parent=gene77;Dbxref=Genbank:WP_002208972.1;Name=WP_002208972.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_002208972.1;transl_table=11 NC_014029.1 RefSeq gene 82236 83612 . - . ID=gene78;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YPZ3_RS00395;old_locus_tag=YPZ3_0066 NC_014029.1 Protein Homology CDS 82236 83612 . - 0 ID=cds74;Parent=gene78;Dbxref=Genbank:WP_002208971.1;Name=WP_002208971.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_002208971.1;transl_table=11 NC_014029.1 RefSeq gene 83609 84307 . - . ID=gene79;Name=YPZ3_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00400;old_locus_tag=YPZ3_0067 NC_014029.1 Protein Homology CDS 83609 84307 . - 0 ID=cds75;Parent=gene79;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11 NC_014029.1 RefSeq gene 84481 84969 . + . ID=gene80;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YPZ3_RS00405;old_locus_tag=YPZ3_0068 NC_014029.1 Protein Homology CDS 84481 84969 . + 0 ID=cds76;Parent=gene80;Dbxref=Genbank:WP_002208969.1;Name=WP_002208969.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_002208969.1;transl_table=11 NC_014029.1 RefSeq gene 85647 86606 . + . ID=gene81;Name=YPZ3_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00410;old_locus_tag=YPZ3_0069 NC_014029.1 Protein Homology CDS 85647 86606 . + 0 ID=cds77;Parent=gene81;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11 NC_014029.1 RefSeq gene 87168 88070 . + . ID=gene82;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=YPZ3_RS00415;old_locus_tag=YPZ3_0070 NC_014029.1 Protein Homology CDS 87168 88070 . + 0 ID=cds78;Parent=gene82;Dbxref=Genbank:WP_002208967.1;Name=WP_002208967.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=cation-efflux pump FieF;protein_id=WP_002208967.1;transl_table=11 NC_014029.1 RefSeq gene 88288 89271 . + . ID=gene83;Name=YPZ3_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00420;old_locus_tag=YPZ3_0071 NC_014029.1 Protein Homology CDS 88288 89271 . + 0 ID=cds79;Parent=gene83;Dbxref=Genbank:WP_002208966.1;Name=WP_002208966.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_002208966.1;transl_table=11 NC_014029.1 RefSeq gene 89492 90481 . + . ID=gene84;Name=YPZ3_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00425;old_locus_tag=YPZ3_0072 NC_014029.1 Protein Homology CDS 89492 90481 . + 0 ID=cds80;Parent=gene84;Dbxref=Genbank:WP_002208965.1;Name=WP_002208965.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_002208965.1;transl_table=11 NC_014029.1 RefSeq gene 90731 91390 . - . ID=gene85;Name=YPZ3_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00430;old_locus_tag=YPZ3_0073 NC_014029.1 Protein Homology CDS 90731 91390 . - 0 ID=cds81;Parent=gene85;Dbxref=Genbank:WP_025473238.1;Name=WP_025473238.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_025473238.1;transl_table=11 NC_014029.1 RefSeq gene 91625 93052 . - . ID=gene86;Name=YPZ3_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00435;old_locus_tag=YPZ3_0074 NC_014029.1 Protein Homology CDS 91625 93052 . - 0 ID=cds82;Parent=gene86;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11 NC_014029.1 RefSeq gene 93118 93831 . - . ID=gene87;Name=YPZ3_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00440;old_locus_tag=YPZ3_0075 NC_014029.1 Protein Homology CDS 93118 93831 . - 0 ID=cds83;Parent=gene87;Dbxref=Genbank:WP_002208962.1;Name=WP_002208962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208962.1;transl_table=11 NC_014029.1 RefSeq gene 93828 94565 . - . ID=gene88;Name=YPZ3_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00445;old_locus_tag=YPZ3_0076 NC_014029.1 Protein Homology CDS 93828 94565 . - 0 ID=cds84;Parent=gene88;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11 NC_014029.1 RefSeq gene 94702 95937 . + . ID=gene89;Name=YPZ3_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00450;old_locus_tag=YPZ3_0077 NC_014029.1 Protein Homology CDS 94702 95937 . + 0 ID=cds85;Parent=gene89;Dbxref=Genbank:WP_002208960.1;Name=WP_002208960.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208960.1;transl_table=11 NC_014029.1 RefSeq gene 96169 96936 . - . ID=gene90;Name=YPZ3_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00455;old_locus_tag=YPZ3_0078 NC_014029.1 Protein Homology CDS 96169 96936 . - 0 ID=cds86;Parent=gene90;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NC_014029.1 RefSeq gene 97065 97700 . - . ID=gene91;Name=YPZ3_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00460;old_locus_tag=YPZ3_0079 NC_014029.1 Protein Homology CDS 97065 97700 . - 0 ID=cds87;Parent=gene91;Dbxref=Genbank:WP_002215864.1;Name=WP_002215864.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215864.1;transl_table=11 NC_014029.1 RefSeq gene 97848 98282 . + . ID=gene92;Name=YPZ3_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00465;old_locus_tag=YPZ3_0080 NC_014029.1 Protein Homology CDS 97848 98282 . + 0 ID=cds88;Parent=gene92;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11 NC_014029.1 RefSeq gene 98623 99369 . - . ID=gene93;Name=YPZ3_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00470;old_locus_tag=YPZ3_0081 NC_014029.1 Protein Homology CDS 98623 99369 . - 0 ID=cds89;Parent=gene93;Dbxref=Genbank:WP_002208956.1;Name=WP_002208956.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_002208956.1;transl_table=11 NC_014029.1 RefSeq gene 99524 100534 . - . ID=gene94;Name=YPZ3_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00475;old_locus_tag=YPZ3_0082 NC_014029.1 Protein Homology CDS 99524 100534 . - 0 ID=cds90;Parent=gene94;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NC_014029.1 RefSeq gene 100771 102294 . - . ID=gene95;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YPZ3_RS00480;old_locus_tag=YPZ3_0083 NC_014029.1 Protein Homology CDS 100771 102294 . - 0 ID=cds91;Parent=gene95;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11 NC_014029.1 RefSeq gene 102471 103319 . - . ID=gene96;Name=YPZ3_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00485;old_locus_tag=YPZ3_0084 NC_014029.1 Protein Homology CDS 102471 103319 . - 0 ID=cds92;Parent=gene96;Dbxref=Genbank:WP_002208954.1;Name=WP_002208954.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_002208954.1;transl_table=11 NC_014029.1 RefSeq gene 103329 103568 . - . ID=gene97;Name=YPZ3_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00490 NC_014029.1 Protein Homology CDS 103329 103568 . - 0 ID=cds93;Parent=gene97;Dbxref=Genbank:WP_032487156.1;Name=WP_032487156.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032487156.1;transl_table=11 NC_014029.1 RefSeq gene 103947 104186 . + . ID=gene98;Name=YPZ3_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00495 NC_014029.1 Protein Homology CDS 103947 104186 . + 0 ID=cds94;Parent=gene98;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11 NC_014029.1 RefSeq repeat_region 104280 104998 . + . ID=id10;gbkey=repeat_region NC_014029.1 RefSeq gene 104394 104852 . - . ID=gene99;Name=YPZ3_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00500;old_locus_tag=YPZ3_0085 NC_014029.1 Protein Homology CDS 104394 104852 . - 0 ID=cds95;Parent=gene99;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 105237 107351 . - . ID=gene100;Name=YPZ3_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00505;old_locus_tag=YPZ3_0086 NC_014029.1 Protein Homology CDS 105237 107351 . - 0 ID=cds96;Parent=gene100;Dbxref=Genbank:WP_002218877.1;Name=WP_002218877.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002218877.1;transl_table=11 NC_014029.1 RefSeq gene 107344 108636 . - . ID=gene101;Name=YPZ3_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00510;old_locus_tag=YPZ3_0087 NC_014029.1 Protein Homology CDS 107344 108636 . - 0 ID=cds97;Parent=gene101;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11 NC_014029.1 RefSeq gene 108849 109088 . + . ID=gene102;Name=YPZ3_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00515 NC_014029.1 Protein Homology CDS 108849 109088 . + 0 ID=cds98;Parent=gene102;Dbxref=Genbank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NC_014029.1 RefSeq gene 109263 109412 . + . ID=gene103;Name=YPZ3_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00520 NC_014029.1 Protein Homology CDS 109263 109412 . + 0 ID=cds99;Parent=gene103;Dbxref=Genbank:WP_002208947.1;Name=WP_002208947.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208947.1;transl_table=11 NC_014029.1 RefSeq gene 109718 110302 . + . ID=gene104;Name=YPZ3_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00525;old_locus_tag=YPZ3_0088 NC_014029.1 Protein Homology CDS 109718 110302 . + 0 ID=cds100;Parent=gene104;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11 NC_014029.1 RefSeq gene 110419 110904 . - . ID=gene105;Name=YPZ3_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00530;old_locus_tag=YPZ3_0089 NC_014029.1 Protein Homology CDS 110419 110904 . - 0 ID=cds101;Parent=gene105;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=regulator of ribonuclease activity A;protein_id=WP_002208945.1;transl_table=11 NC_014029.1 RefSeq gene 111046 111963 . - . ID=gene106;Name=YPZ3_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00535;old_locus_tag=YPZ3_0090 NC_014029.1 Protein Homology CDS 111046 111963 . - 0 ID=cds102;Parent=gene106;Dbxref=Genbank:WP_002208944.1;Name=WP_002208944.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_002208944.1;transl_table=11 NC_014029.1 RefSeq gene 112199 113530 . - . ID=gene107;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YPZ3_RS00540;old_locus_tag=YPZ3_0091 NC_014029.1 Protein Homology CDS 112199 113530 . - 0 ID=cds103;Parent=gene107;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NC_014029.1 RefSeq gene 113601 114125 . - . ID=gene108;Name=YPZ3_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00545;old_locus_tag=YPZ3_0092 NC_014029.1 Protein Homology CDS 113601 114125 . - 0 ID=cds104;Parent=gene108;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NC_014029.1 RefSeq gene 114225 115070 . - . ID=gene109;Name=YPZ3_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00550;old_locus_tag=YPZ3_0093 NC_014029.1 Protein Homology CDS 114225 115070 . - 0 ID=cds105;Parent=gene109;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NC_014029.1 RefSeq gene 115136 116164 . - . ID=gene110;Name=YPZ3_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00555;old_locus_tag=YPZ3_0094 NC_014029.1 Protein Homology CDS 115136 116164 . - 0 ID=cds106;Parent=gene110;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11 NC_014029.1 RefSeq gene 116287 116430 . - . ID=gene111;Name=YPZ3_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00560 NC_014029.1 Protein Homology CDS 116287 116430 . - 0 ID=cds107;Parent=gene111;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11 NC_014029.1 RefSeq gene 116517 118715 . - . ID=gene112;Name=YPZ3_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00565;old_locus_tag=YPZ3_0095 NC_014029.1 Protein Homology CDS 116517 118715 . - 0 ID=cds108;Parent=gene112;Dbxref=Genbank:WP_002208938.1;Name=WP_002208938.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002208938.1;transl_table=11 NC_014029.1 RefSeq gene 118958 119173 . + . ID=gene113;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YPZ3_RS00570 NC_014029.1 Protein Homology CDS 118958 119173 . + 0 ID=cds109;Parent=gene113;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NC_014029.1 RefSeq gene 119716 120171 . - . ID=gene114;Name=YPZ3_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00575;old_locus_tag=YPZ3_0096 NC_014029.1 Protein Homology CDS 119716 120171 . - 0 ID=cds110;Parent=gene114;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11 NC_014029.1 RefSeq gene 120222 120383 . + . ID=gene115;Name=YPZ3_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00580 NC_014029.1 Protein Homology CDS 120222 120383 . + 0 ID=cds111;Parent=gene115;Dbxref=Genbank:WP_002216739.1;Name=WP_002216739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216739.1;transl_table=11 NC_014029.1 RefSeq gene 120520 120837 . - . ID=gene116;Name=YPZ3_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00585;old_locus_tag=YPZ3_0097 NC_014029.1 Protein Homology CDS 120520 120837 . - 0 ID=cds112;Parent=gene116;Dbxref=Genbank:WP_002208935.1;Name=WP_002208935.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_002208935.1;transl_table=11 NC_014029.1 RefSeq gene 121215 122374 . + . ID=gene117;Name=YPZ3_RS00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS00590;old_locus_tag=YPZ3_0098;pseudo=true NC_014029.1 Protein Homology CDS 121215 122374 . + 0 ID=cds113;Parent=gene117;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cystathionine gamma-synthase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 122377 124812 . + . ID=gene118;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YPZ3_RS00595;old_locus_tag=YPZ3_0099 NC_014029.1 Protein Homology CDS 122377 124812 . + 0 ID=cds114;Parent=gene118;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NC_014029.1 RefSeq gene 125045 125929 . + . ID=gene119;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YPZ3_RS00600;old_locus_tag=YPZ3_0100 NC_014029.1 Protein Homology CDS 125045 125929 . + 0 ID=cds115;Parent=gene119;Dbxref=Genbank:WP_002208933.1;Name=WP_002208933.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NC_014029.1 RefSeq repeat_region 125962 127599 . + . ID=id11;gbkey=repeat_region NC_014029.1 RefSeq gene 126107 126892 . - . ID=gene120;Name=YPZ3_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00605;old_locus_tag=YPZ3_0101 NC_014029.1 Protein Homology CDS 126107 126892 . - 0 ID=cds116;Parent=gene120;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_014029.1 RefSeq gene 126946 127461 . - . ID=gene121;Name=YPZ3_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00610 NC_014029.1 Protein Homology CDS 126946 127461 . - 0 ID=cds117;Parent=gene121;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_014029.1 RefSeq gene 127654 128412 . - . ID=gene122;Name=YPZ3_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00615;old_locus_tag=YPZ3_0103 NC_014029.1 Protein Homology CDS 127654 128412 . - 0 ID=cds118;Parent=gene122;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NC_014029.1 RefSeq gene 128447 129283 . - . ID=gene123;Name=YPZ3_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00620;old_locus_tag=YPZ3_0104 NC_014029.1 Protein Homology CDS 128447 129283 . - 0 ID=cds119;Parent=gene123;Dbxref=Genbank:WP_002216348.1;Name=WP_002216348.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_002216348.1;transl_table=11 NC_014029.1 RefSeq gene 129301 129630 . - . ID=gene124;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YPZ3_RS00625;old_locus_tag=YPZ3_0105 NC_014029.1 Protein Homology CDS 129301 129630 . - 0 ID=cds120;Parent=gene124;Dbxref=Genbank:WP_002208928.1;Name=WP_002208928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002208928.1;transl_table=11 NC_014029.1 RefSeq gene 130005 132716 . - . ID=gene125;Name=YPZ3_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00630;old_locus_tag=YPZ3_0106 NC_014029.1 Protein Homology CDS 130005 132716 . - 0 ID=cds121;Parent=gene125;Dbxref=Genbank:WP_002208926.1;Name=WP_002208926.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208926.1;transl_table=11 NC_014029.1 RefSeq gene 133034 133384 . + . ID=gene126;Name=YPZ3_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00635;old_locus_tag=YPZ3_0107 NC_014029.1 GeneMarkS+ CDS 133034 133384 . + 0 ID=cds122;Parent=gene126;Dbxref=Genbank:WP_002215922.1;Name=WP_002215922.1;gbkey=CDS;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_002215922.1;transl_table=11 NC_014029.1 RefSeq gene 133414 135438 . + . ID=gene127;Name=YPZ3_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00640;old_locus_tag=YPZ3_0108 NC_014029.1 Protein Homology CDS 133414 135438 . + 0 ID=cds123;Parent=gene127;Dbxref=Genbank:WP_002430067.1;Name=WP_002430067.1;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=WP_002430067.1;transl_table=11 NC_014029.1 RefSeq gene 135451 137547 . + . ID=gene128;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS00645;old_locus_tag=YPZ3_0109 NC_014029.1 Protein Homology CDS 135451 137547 . + 0 ID=cds124;Parent=gene128;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NC_014029.1 RefSeq gene 137876 138451 . - . ID=gene129;Name=YPZ3_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00650;old_locus_tag=YPZ3_0110 NC_014029.1 Protein Homology CDS 137876 138451 . - 0 ID=cds125;Parent=gene129;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11 NC_014029.1 RefSeq gene 138511 139212 . - . ID=gene130;Name=YPZ3_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00655;old_locus_tag=YPZ3_0111 NC_014029.1 Protein Homology CDS 138511 139212 . - 0 ID=cds126;Parent=gene130;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11 NC_014029.1 RefSeq gene 139299 140075 . + . ID=gene131;Name=YPZ3_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00660;old_locus_tag=YPZ3_0112 NC_014029.1 Protein Homology CDS 139299 140075 . + 0 ID=cds127;Parent=gene131;Dbxref=Genbank:WP_002208922.1;Name=WP_002208922.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_002208922.1;transl_table=11 NC_014029.1 RefSeq gene 140245 140514 . + . ID=gene132;Name=YPZ3_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00665 NC_014029.1 Protein Homology CDS 140245 140514 . + 0 ID=cds128;Parent=gene132;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11 NC_014029.1 RefSeq gene 140652 140909 . - . ID=gene133;Name=YPZ3_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00670 NC_014029.1 Protein Homology CDS 140652 140909 . - 0 ID=cds129;Parent=gene133;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11 NC_014029.1 RefSeq gene 140945 143260 . - . ID=gene134;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YPZ3_RS00675;old_locus_tag=YPZ3_0113 NC_014029.1 Protein Homology CDS 140945 143260 . - 0 ID=cds130;Parent=gene134;Dbxref=Genbank:WP_002208919.1;Name=WP_002208919.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_002208919.1;transl_table=11 NC_014029.1 RefSeq gene 143352 143579 . - . ID=gene135;Name=YPZ3_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00680 NC_014029.1 Protein Homology CDS 143352 143579 . - 0 ID=cds131;Parent=gene135;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11 NC_014029.1 RefSeq gene 143574 143720 . + . ID=gene136;Name=YPZ3_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00685 NC_014029.1 Protein Homology CDS 143574 143720 . + 0 ID=cds132;Parent=gene136;Dbxref=Genbank:WP_002215925.1;Name=WP_002215925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215925.1;transl_table=11 NC_014029.1 RefSeq gene 144103 146478 . - . ID=gene137;Name=YPZ3_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00690;old_locus_tag=YPZ3_0114 NC_014029.1 Protein Homology CDS 144103 146478 . - 0 ID=cds133;Parent=gene137;Dbxref=Genbank:WP_002208916.1;Name=WP_002208916.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_002208916.1;transl_table=11 NC_014029.1 RefSeq gene 147012 147527 . + . ID=gene138;Name=YPZ3_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00695;old_locus_tag=YPZ3_0115 NC_014029.1 Protein Homology CDS 147012 147527 . + 0 ID=cds134;Parent=gene138;Dbxref=Genbank:WP_002208915.1;Name=WP_002208915.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NC_014029.1 RefSeq gene 147663 148382 . + . ID=gene139;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YPZ3_RS00700;old_locus_tag=YPZ3_0116 NC_014029.1 Protein Homology CDS 147663 148382 . + 0 ID=cds135;Parent=gene139;Dbxref=Genbank:WP_002208914.1;Name=WP_002208914.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_002208914.1;transl_table=11 NC_014029.1 RefSeq gene 148379 149731 . + . ID=gene140;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=YPZ3_RS00705;old_locus_tag=YPZ3_0117 NC_014029.1 Protein Homology CDS 148379 149731 . + 0 ID=cds136;Parent=gene140;Dbxref=Genbank:WP_002208913.1;Name=WP_002208913.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_002208913.1;transl_table=11 NC_014029.1 RefSeq gene 149866 151485 . - . ID=gene141;Name=YPZ3_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00710;old_locus_tag=YPZ3_0118 NC_014029.1 Protein Homology CDS 149866 151485 . - 0 ID=cds137;Parent=gene141;Dbxref=Genbank:WP_002208912.1;Name=WP_002208912.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_002208912.1;transl_table=11 NC_014029.1 RefSeq gene 151682 152563 . - . ID=gene142;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YPZ3_RS00715;old_locus_tag=YPZ3_0119 NC_014029.1 Protein Homology CDS 151682 152563 . - 0 ID=cds138;Parent=gene142;Dbxref=Genbank:WP_002208911.1;Name=WP_002208911.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_002208911.1;transl_table=11 NC_014029.1 RefSeq gene 152726 153133 . - . ID=gene143;Name=YPZ3_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00720;old_locus_tag=YPZ3_0120 NC_014029.1 Protein Homology CDS 152726 153133 . - 0 ID=cds139;Parent=gene143;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NC_014029.1 RefSeq gene 153162 153842 . - . ID=gene144;Name=YPZ3_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00725;old_locus_tag=YPZ3_0121 NC_014029.1 Protein Homology CDS 153162 153842 . - 0 ID=cds140;Parent=gene144;Dbxref=Genbank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;product=nucleotidase;protein_id=WP_002208909.1;transl_table=11 NC_014029.1 RefSeq gene 153986 156133 . - . ID=gene145;Name=YPZ3_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00730;old_locus_tag=YPZ3_0122 NC_014029.1 Protein Homology CDS 153986 156133 . - 0 ID=cds141;Parent=gene145;Dbxref=Genbank:WP_002208908.1;Name=WP_002208908.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_002208908.1;transl_table=11 NC_014029.1 RefSeq gene 156413 156607 . + . ID=gene146;Name=YPZ3_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00735 NC_014029.1 Protein Homology CDS 156413 156607 . + 0 ID=cds142;Parent=gene146;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11 NC_014029.1 RefSeq gene 156720 157265 . + . ID=gene147;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YPZ3_RS00740;old_locus_tag=YPZ3_0123 NC_014029.1 Protein Homology CDS 156720 157265 . + 0 ID=cds143;Parent=gene147;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11 NC_014029.1 RefSeq gene 157401 159956 . - . ID=gene148;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YPZ3_RS00745;old_locus_tag=YPZ3_0124 NC_014029.1 Protein Homology CDS 157401 159956 . - 0 ID=cds144;Parent=gene148;Dbxref=Genbank:WP_002208906.1;Name=WP_002208906.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_002208906.1;transl_table=11 NC_014029.1 RefSeq gene 160076 160972 . + . ID=gene149;Name=YPZ3_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00750;old_locus_tag=YPZ3_0125 NC_014029.1 Protein Homology CDS 160076 160972 . + 0 ID=cds145;Parent=gene149;Dbxref=Genbank:WP_002208905.1;Name=WP_002208905.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_002208905.1;transl_table=11 NC_014029.1 RefSeq gene 160972 161577 . + . ID=gene150;Name=YPZ3_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00755;old_locus_tag=YPZ3_0126 NC_014029.1 Protein Homology CDS 160972 161577 . + 0 ID=cds146;Parent=gene150;Dbxref=Genbank:WP_002208904.1;Name=WP_002208904.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_002208904.1;transl_table=11 NC_014029.1 RefSeq gene 161570 162151 . + . ID=gene151;Name=YPZ3_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00760 NC_014029.1 Protein Homology CDS 161570 162151 . + 0 ID=cds147;Parent=gene151;Dbxref=Genbank:WP_002217890.1;Name=WP_002217890.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217890.1;transl_table=11 NC_014029.1 RefSeq gene 162186 162545 . + . ID=gene152;Name=YPZ3_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00765 NC_014029.1 Protein Homology CDS 162186 162545 . + 0 ID=cds148;Parent=gene152;Dbxref=Genbank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223837.1;transl_table=11 NC_014029.1 RefSeq gene 162548 162937 . - . ID=gene153;Name=YPZ3_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00770;old_locus_tag=YPZ3_0128 NC_014029.1 Protein Homology CDS 162548 162937 . - 0 ID=cds149;Parent=gene153;Dbxref=Genbank:WP_002208901.1;Name=WP_002208901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208901.1;transl_table=11 NC_014029.1 RefSeq gene 162972 164096 . + . ID=gene154;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS00775;old_locus_tag=YPZ3_0129 NC_014029.1 Protein Homology CDS 162972 164096 . + 0 ID=cds150;Parent=gene154;Dbxref=Genbank:WP_002228144.1;Name=WP_002228144.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_002228144.1;transl_table=11 NC_014029.1 RefSeq gene 164445 164966 . + . ID=gene155;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YPZ3_RS00780;old_locus_tag=YPZ3_0130 NC_014029.1 Protein Homology CDS 164445 164966 . + 0 ID=cds151;Parent=gene155;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11 NC_014029.1 RefSeq gene 165023 166111 . + . ID=gene156;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YPZ3_RS00785;old_locus_tag=YPZ3_0131 NC_014029.1 Protein Homology CDS 165023 166111 . + 0 ID=cds152;Parent=gene156;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NC_014029.1 RefSeq gene 166365 167354 . + . ID=gene157;Name=YPZ3_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00790;old_locus_tag=YPZ3_0132 NC_014029.1 Protein Homology CDS 166365 167354 . + 0 ID=cds153;Parent=gene157;Dbxref=Genbank:WP_002208897.1;Name=WP_002208897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208897.1;transl_table=11 NC_014029.1 RefSeq gene 167438 168253 . + . ID=gene158;Name=YPZ3_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00795;old_locus_tag=YPZ3_0133 NC_014029.1 Protein Homology CDS 167438 168253 . + 0 ID=cds154;Parent=gene158;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11 NC_014029.1 RefSeq gene 168556 169233 . + . ID=gene159;Name=YPZ3_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00800;old_locus_tag=YPZ3_0134 NC_014029.1 Protein Homology CDS 168556 169233 . + 0 ID=cds155;Parent=gene159;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NC_014029.1 RefSeq gene 169226 169924 . + . ID=gene160;Name=YPZ3_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00805;old_locus_tag=YPZ3_0135 NC_014029.1 Protein Homology CDS 169226 169924 . + 0 ID=cds156;Parent=gene160;Dbxref=Genbank:WP_002208892.1;Name=WP_002208892.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NC_014029.1 RefSeq gene 169926 170966 . + . ID=gene161;Name=YPZ3_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00810;old_locus_tag=YPZ3_0136 NC_014029.1 Protein Homology CDS 169926 170966 . + 0 ID=cds157;Parent=gene161;Dbxref=Genbank:WP_002208891.1;Name=WP_002208891.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_002208891.1;transl_table=11 NC_014029.1 RefSeq gene 171121 172533 . - . ID=gene162;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPZ3_RS00815;old_locus_tag=YPZ3_0137 NC_014029.1 Protein Homology CDS 171121 172533 . - 0 ID=cds158;Parent=gene162;Dbxref=Genbank:WP_002208890.1;Name=WP_002208890.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase 2;protein_id=WP_002208890.1;transl_table=11 NC_014029.1 RefSeq gene 172621 173427 . - . ID=gene163;Name=YPZ3_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00820;old_locus_tag=YPZ3_0138 NC_014029.1 Protein Homology CDS 172621 173427 . - 0 ID=cds159;Parent=gene163;Dbxref=Genbank:WP_002208888.1;Name=WP_002208888.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11 NC_014029.1 RefSeq gene 173630 173956 . - . ID=gene164;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YPZ3_RS00825;old_locus_tag=YPZ3_0139 NC_014029.1 Protein Homology CDS 173630 173956 . - 0 ID=cds160;Parent=gene164;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11 NC_014029.1 RefSeq gene 173953 176499 . - . ID=gene165;Name=YPZ3_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00830;old_locus_tag=YPZ3_0140 NC_014029.1 Protein Homology CDS 173953 176499 . - 0 ID=cds161;Parent=gene165;Dbxref=Genbank:WP_002208886.1;Name=WP_002208886.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_002208886.1;transl_table=11 NC_014029.1 RefSeq gene 176821 178119 . + . ID=gene166;Name=YPZ3_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00835;old_locus_tag=YPZ3_0141 NC_014029.1 Protein Homology CDS 176821 178119 . + 0 ID=cds162;Parent=gene166;Dbxref=Genbank:WP_002228747.1;Name=WP_002228747.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NC_014029.1 RefSeq gene 178204 179388 . - . ID=gene167;Name=YPZ3_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00840;old_locus_tag=YPZ3_0142 NC_014029.1 Protein Homology CDS 178204 179388 . - 0 ID=cds163;Parent=gene167;Dbxref=Genbank:WP_002215690.1;Name=WP_002215690.1;gbkey=CDS;product=protein TsgA;protein_id=WP_002215690.1;transl_table=11 NC_014029.1 RefSeq gene 179874 181934 . + . ID=gene168;Name=YPZ3_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00845;old_locus_tag=YPZ3_0143 NC_014029.1 Protein Homology CDS 179874 181934 . + 0 ID=cds164;Parent=gene168;Dbxref=Genbank:WP_002208882.1;Name=WP_002208882.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002208882.1;transl_table=11 NC_014029.1 RefSeq gene 182035 183021 . - . ID=gene169;Name=YPZ3_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00850;old_locus_tag=YPZ3_0144 NC_014029.1 Protein Homology CDS 182035 183021 . - 0 ID=cds165;Parent=gene169;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NC_014029.1 RefSeq gene 183270 184583 . - . ID=gene170;Name=YPZ3_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00855;old_locus_tag=YPZ3_0145 NC_014029.1 Protein Homology CDS 183270 184583 . - 0 ID=cds166;Parent=gene170;Dbxref=Genbank:WP_002208880.1;Name=WP_002208880.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002208880.1;transl_table=11 NC_014029.1 RefSeq gene 185099 185668 . + . ID=gene171;Name=YPZ3_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00860;old_locus_tag=YPZ3_0146 NC_014029.1 Protein Homology CDS 185099 185668 . + 0 ID=cds167;Parent=gene171;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11 NC_014029.1 RefSeq gene 185994 187535 . + . ID=gene172;Name=YPZ3_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00865;old_locus_tag=YPZ3_0147 NC_014029.1 Protein Homology CDS 185994 187535 . + 0 ID=cds168;Parent=gene172;Dbxref=Genbank:WP_002215686.1;Name=WP_002215686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215686.1;transl_table=11 NC_014029.1 RefSeq gene 187778 188353 . + . ID=gene173;Name=YPZ3_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00870;old_locus_tag=YPZ3_0148 NC_014029.1 Protein Homology CDS 187778 188353 . + 0 ID=cds169;Parent=gene173;Dbxref=Genbank:WP_002212294.1;Name=WP_002212294.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_002212294.1;transl_table=11 NC_014029.1 RefSeq gene 188486 189703 . + . ID=gene174;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YPZ3_RS00875;old_locus_tag=YPZ3_0149 NC_014029.1 Protein Homology CDS 188486 189703 . + 0 ID=cds170;Parent=gene174;Dbxref=Genbank:WP_002212295.1;Name=WP_002212295.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=WP_002212295.1;transl_table=11 NC_014029.1 RefSeq repeat_region 189740 189909 . + . ID=id12;gbkey=repeat_region NC_014029.1 RefSeq gene 189929 192049 . - . ID=gene175;Name=YPZ3_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00880;old_locus_tag=YPZ3_0150 NC_014029.1 Protein Homology CDS 189929 192049 . - 0 ID=cds171;Parent=gene175;Dbxref=Genbank:WP_002212296.1;Name=WP_002212296.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212296.1;transl_table=11 NC_014029.1 RefSeq gene 192135 192767 . - . ID=gene176;Name=YPZ3_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00885;old_locus_tag=YPZ3_0151 NC_014029.1 Protein Homology CDS 192135 192767 . - 0 ID=cds172;Parent=gene176;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11 NC_014029.1 RefSeq gene 193103 193510 . + . ID=gene177;Name=YPZ3_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00890;old_locus_tag=YPZ3_0152 NC_014029.1 Protein Homology CDS 193103 193510 . + 0 ID=cds173;Parent=gene177;Dbxref=Genbank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212298.1;transl_table=11 NC_014029.1 RefSeq gene 193582 194013 . + . ID=gene178;Name=YPZ3_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00895;old_locus_tag=YPZ3_0153 NC_014029.1 Protein Homology CDS 193582 194013 . + 0 ID=cds174;Parent=gene178;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11 NC_014029.1 RefSeq gene 194191 195060 . - . ID=gene179;Name=YPZ3_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00900;old_locus_tag=YPZ3_0154 NC_014029.1 Protein Homology CDS 194191 195060 . - 0 ID=cds175;Parent=gene179;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NC_014029.1 RefSeq gene 195209 195445 . - . ID=gene180;Name=YPZ3_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00905 NC_014029.1 Protein Homology CDS 195209 195445 . - 0 ID=cds176;Parent=gene180;Dbxref=Genbank:WP_002212301.1;Name=WP_002212301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212301.1;transl_table=11 NC_014029.1 RefSeq gene 195442 196422 . - . ID=gene181;Name=YPZ3_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00910;old_locus_tag=YPZ3_0155 NC_014029.1 Protein Homology CDS 195442 196422 . - 0 ID=cds177;Parent=gene181;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NC_014029.1 RefSeq gene 196524 197126 . + . ID=gene182;Name=YPZ3_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00915;old_locus_tag=YPZ3_0156 NC_014029.1 Protein Homology CDS 196524 197126 . + 0 ID=cds178;Parent=gene182;Dbxref=Genbank:WP_002212303.1;Name=WP_002212303.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002212303.1;transl_table=11 NC_014029.1 RefSeq gene 197329 198390 . + . ID=gene183;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YPZ3_RS00920;old_locus_tag=YPZ3_0157 NC_014029.1 Protein Homology CDS 197329 198390 . + 0 ID=cds179;Parent=gene183;Dbxref=Genbank:WP_002212305.1;Name=WP_002212305.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_002212305.1;transl_table=11 NC_014029.1 RefSeq gene 198399 199166 . + . ID=gene184;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YPZ3_RS00925;old_locus_tag=YPZ3_0158 NC_014029.1 Protein Homology CDS 198399 199166 . + 0 ID=cds180;Parent=gene184;Dbxref=Genbank:WP_002212307.1;Name=WP_002212307.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_002212307.1;transl_table=11 NC_014029.1 RefSeq gene 199163 200017 . + . ID=gene185;Name=YPZ3_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00930;old_locus_tag=YPZ3_0159 NC_014029.1 Protein Homology CDS 199163 200017 . + 0 ID=cds181;Parent=gene185;Dbxref=Genbank:WP_002212309.1;Name=WP_002212309.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_002212309.1;transl_table=11 NC_014029.1 RefSeq gene 200014 200862 . + . ID=gene186;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YPZ3_RS00935;old_locus_tag=YPZ3_0160 NC_014029.1 Protein Homology CDS 200014 200862 . + 0 ID=cds182;Parent=gene186;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NC_014029.1 RefSeq gene 200875 201855 . - . ID=gene187;Name=YPZ3_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00940;old_locus_tag=YPZ3_0161 NC_014029.1 Protein Homology CDS 200875 201855 . - 0 ID=cds183;Parent=gene187;Dbxref=Genbank:WP_002212311.1;Name=WP_002212311.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212311.1;transl_table=11 NC_014029.1 RefSeq gene 201948 202937 . - . ID=gene188;Name=YPZ3_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00945;old_locus_tag=YPZ3_0162 NC_014029.1 Protein Homology CDS 201948 202937 . - 0 ID=cds184;Parent=gene188;Dbxref=Genbank:WP_002212312.1;Name=WP_002212312.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212312.1;transl_table=11 NC_014029.1 RefSeq gene 203072 204990 . - . ID=gene189;Name=YPZ3_RS00950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS00950;pseudo=true NC_014029.1 Protein Homology CDS 203072 204990 . - 0 ID=cds185;Parent=gene189;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 205241 205789 . + . ID=gene190;Name=YPZ3_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00955;old_locus_tag=YPZ3_0165 NC_014029.1 Protein Homology CDS 205241 205789 . + 0 ID=cds186;Parent=gene190;Dbxref=Genbank:WP_002215966.1;Name=WP_002215966.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NC_014029.1 RefSeq gene 205793 207601 . + . ID=gene191;Name=YPZ3_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00960;old_locus_tag=YPZ3_0166 NC_014029.1 Protein Homology CDS 205793 207601 . + 0 ID=cds187;Parent=gene191;Dbxref=Genbank:WP_002212314.1;Name=WP_002212314.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_002212314.1;transl_table=11 NC_014029.1 RefSeq gene 207617 207838 . + . ID=gene192;Name=YPZ3_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00965 NC_014029.1 Protein Homology CDS 207617 207838 . + 0 ID=cds188;Parent=gene192;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11 NC_014029.1 RefSeq gene 207933 208520 . + . ID=gene193;Name=YPZ3_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00970;old_locus_tag=YPZ3_0167 NC_014029.1 Protein Homology CDS 207933 208520 . + 0 ID=cds189;Parent=gene193;Dbxref=Genbank:WP_002212316.1;Name=WP_002212316.1;Note=rotamase;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212316.1;transl_table=11 NC_014029.1 RefSeq gene 208741 208959 . - . ID=gene194;Name=YPZ3_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00975 NC_014029.1 Protein Homology CDS 208741 208959 . - 0 ID=cds190;Parent=gene194;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NC_014029.1 RefSeq gene 209274 210074 . + . ID=gene195;Name=YPZ3_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00980;old_locus_tag=YPZ3_0168 NC_014029.1 Protein Homology CDS 209274 210074 . + 0 ID=cds191;Parent=gene195;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NC_014029.1 RefSeq gene 210328 211050 . + . ID=gene196;Name=YPZ3_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00985;old_locus_tag=YPZ3_0169 NC_014029.1 Protein Homology CDS 210328 211050 . + 0 ID=cds192;Parent=gene196;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11 NC_014029.1 RefSeq gene 211050 211445 . + . ID=gene197;Name=YPZ3_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00990;old_locus_tag=YPZ3_0170 NC_014029.1 Protein Homology CDS 211050 211445 . + 0 ID=cds193;Parent=gene197;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11 NC_014029.1 RefSeq gene 211445 211810 . + . ID=gene198;Name=YPZ3_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS00995;old_locus_tag=YPZ3_0171 NC_014029.1 Protein Homology CDS 211445 211810 . + 0 ID=cds194;Parent=gene198;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11 NC_014029.1 RefSeq gene 211830 212117 . + . ID=gene199;Name=YPZ3_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01000 NC_014029.1 Protein Homology CDS 211830 212117 . + 0 ID=cds195;Parent=gene199;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11 NC_014029.1 RefSeq gene 212255 212629 . + . ID=gene200;Name=YPZ3_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01005;old_locus_tag=YPZ3_0172 NC_014029.1 Protein Homology CDS 212255 212629 . + 0 ID=cds196;Parent=gene200;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NC_014029.1 RefSeq gene 212726 213196 . + . ID=gene201;Name=YPZ3_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01010;old_locus_tag=YPZ3_0173 NC_014029.1 Protein Homology CDS 212726 213196 . + 0 ID=cds197;Parent=gene201;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NC_014029.1 RefSeq gene 213290 215398 . + . ID=gene202;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YPZ3_RS01015;old_locus_tag=YPZ3_0174 NC_014029.1 Protein Homology CDS 213290 215398 . + 0 ID=cds198;Parent=gene202;Dbxref=Genbank:WP_002212325.1;Name=WP_002212325.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NC_014029.1 RefSeq gene 215471 216655 . + . ID=gene203;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPZ3_RS01020;old_locus_tag=YPZ3_0175 NC_014029.1 Protein Homology CDS 215471 216655 . + 0 ID=cds199;Parent=gene203;Dbxref=Genbank:WP_002212326.1;Name=WP_002212326.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NC_014029.1 RefSeq repeat_region 216705 217433 . + . ID=id13;gbkey=repeat_region NC_014029.1 RefSeq gene 216858 217316 . + . ID=gene204;Name=YPZ3_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01025;old_locus_tag=YPZ3_0176 NC_014029.1 Protein Homology CDS 216858 217316 . + 0 ID=cds200;Parent=gene204;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 217504 217698 . + . ID=gene205;Name=YPZ3_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01030 NC_014029.1 Protein Homology CDS 217504 217698 . + 0 ID=cds201;Parent=gene205;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NC_014029.1 RefSeq gene 217777 218250 . + . ID=gene206;Name=YPZ3_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01035;old_locus_tag=YPZ3_0177 NC_014029.1 Protein Homology CDS 217777 218250 . + 0 ID=cds202;Parent=gene206;Dbxref=Genbank:WP_002212327.1;Name=WP_002212327.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_002212327.1;transl_table=11 NC_014029.1 RefSeq gene 218664 218975 . + . ID=gene207;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YPZ3_RS01040;old_locus_tag=YPZ3_0178 NC_014029.1 Protein Homology CDS 218664 218975 . + 0 ID=cds203;Parent=gene207;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NC_014029.1 RefSeq gene 219008 219637 . + . ID=gene208;Name=YPZ3_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01045;old_locus_tag=YPZ3_0179 NC_014029.1 Protein Homology CDS 219008 219637 . + 0 ID=cds204;Parent=gene208;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NC_014029.1 RefSeq gene 219654 220259 . + . ID=gene209;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YPZ3_RS01050;old_locus_tag=YPZ3_0180 NC_014029.1 Protein Homology CDS 219654 220259 . + 0 ID=cds205;Parent=gene209;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NC_014029.1 RefSeq gene 220256 220558 . + . ID=gene210;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YPZ3_RS01055;old_locus_tag=YPZ3_0181 NC_014029.1 Protein Homology CDS 220256 220558 . + 0 ID=cds206;Parent=gene210;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NC_014029.1 RefSeq gene 220575 221399 . + . ID=gene211;Name=YPZ3_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01060;old_locus_tag=YPZ3_0182 NC_014029.1 Protein Homology CDS 220575 221399 . + 0 ID=cds207;Parent=gene211;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NC_014029.1 RefSeq gene 221414 221692 . + . ID=gene212;Name=YPZ3_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01065;old_locus_tag=YPZ3_0182a NC_014029.1 Protein Homology CDS 221414 221692 . + 0 ID=cds208;Parent=gene212;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NC_014029.1 RefSeq gene 221707 222039 . + . ID=gene213;Name=YPZ3_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01070;old_locus_tag=YPZ3_0183 NC_014029.1 Protein Homology CDS 221707 222039 . + 0 ID=cds209;Parent=gene213;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NC_014029.1 RefSeq gene 222057 222755 . + . ID=gene214;Name=YPZ3_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01075;old_locus_tag=YPZ3_0184 NC_014029.1 Protein Homology CDS 222057 222755 . + 0 ID=cds210;Parent=gene214;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NC_014029.1 RefSeq gene 222768 223178 . + . ID=gene215;Name=YPZ3_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01080;old_locus_tag=YPZ3_0185 NC_014029.1 Protein Homology CDS 222768 223178 . + 0 ID=cds211;Parent=gene215;Dbxref=Genbank:WP_002218940.1;Name=WP_002218940.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11 NC_014029.1 RefSeq gene 223178 223369 . + . ID=gene216;Name=YPZ3_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01085;old_locus_tag=YPZ3_0185a NC_014029.1 Protein Homology CDS 223178 223369 . + 0 ID=cds212;Parent=gene216;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NC_014029.1 RefSeq gene 223369 223623 . + . ID=gene217;Name=YPZ3_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01090;old_locus_tag=YPZ3_p1 NC_014029.1 Protein Homology CDS 223369 223623 . + 0 ID=cds213;Parent=gene217;Dbxref=Genbank:WP_002228135.1;Name=WP_002228135.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NC_014029.1 RefSeq gene 223804 224175 . + . ID=gene218;Name=YPZ3_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01095;old_locus_tag=YPZ3_0186 NC_014029.1 Protein Homology CDS 223804 224175 . + 0 ID=cds214;Parent=gene218;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NC_014029.1 RefSeq gene 224186 224500 . + . ID=gene219;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YPZ3_RS01100;old_locus_tag=YPZ3_0187 NC_014029.1 Protein Homology CDS 224186 224500 . + 0 ID=cds215;Parent=gene219;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NC_014029.1 RefSeq gene 224515 225054 . + . ID=gene220;Name=YPZ3_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01105;old_locus_tag=YPZ3_0188 NC_014029.1 Protein Homology CDS 224515 225054 . + 0 ID=cds216;Parent=gene220;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NC_014029.1 RefSeq gene 225068 225373 . + . ID=gene221;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YPZ3_RS01110;old_locus_tag=YPZ3_0189 NC_014029.1 Protein Homology CDS 225068 225373 . + 0 ID=cds217;Parent=gene221;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NC_014029.1 RefSeq gene 225407 225799 . + . ID=gene222;Name=YPZ3_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01115;old_locus_tag=YPZ3_0190 NC_014029.1 Protein Homology CDS 225407 225799 . + 0 ID=cds218;Parent=gene222;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NC_014029.1 RefSeq gene 225814 226347 . + . ID=gene223;Name=YPZ3_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01120;old_locus_tag=YPZ3_0191 NC_014029.1 Protein Homology CDS 225814 226347 . + 0 ID=cds219;Parent=gene223;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NC_014029.1 RefSeq gene 226357 226710 . + . ID=gene224;Name=YPZ3_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01125;old_locus_tag=YPZ3_0192 NC_014029.1 Protein Homology CDS 226357 226710 . + 0 ID=cds220;Parent=gene224;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NC_014029.1 RefSeq gene 226725 227228 . + . ID=gene225;Name=YPZ3_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01130;old_locus_tag=YPZ3_0193 NC_014029.1 Protein Homology CDS 226725 227228 . + 0 ID=cds221;Parent=gene225;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NC_014029.1 RefSeq gene 227231 227410 . + . ID=gene226;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YPZ3_RS01135 NC_014029.1 Protein Homology CDS 227231 227410 . + 0 ID=cds222;Parent=gene226;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NC_014029.1 RefSeq gene 227414 227848 . + . ID=gene227;Name=YPZ3_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01140;old_locus_tag=YPZ3_0194 NC_014029.1 Protein Homology CDS 227414 227848 . + 0 ID=cds223;Parent=gene227;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NC_014029.1 RefSeq gene 227856 229187 . + . ID=gene228;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=YPZ3_RS01145;old_locus_tag=YPZ3_0195 NC_014029.1 Protein Homology CDS 227856 229187 . + 0 ID=cds224;Parent=gene228;Dbxref=Genbank:WP_002213344.1;Name=WP_002213344.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NC_014029.1 RefSeq gene 229221 229337 . + . ID=gene229;Name=YPZ3_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01150 NC_014029.1 Protein Homology CDS 229221 229337 . + 0 ID=cds225;Parent=gene229;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NC_014029.1 RefSeq gene 229485 229841 . + . ID=gene230;Name=YPZ3_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01155;old_locus_tag=YPZ3_0196 NC_014029.1 Protein Homology CDS 229485 229841 . + 0 ID=cds226;Parent=gene230;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NC_014029.1 RefSeq gene 229858 230247 . + . ID=gene231;Name=YPZ3_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01160;old_locus_tag=YPZ3_0197 NC_014029.1 Protein Homology CDS 229858 230247 . + 0 ID=cds227;Parent=gene231;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NC_014029.1 RefSeq gene 230278 230898 . + . ID=gene232;Name=YPZ3_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01165;old_locus_tag=YPZ3_0198 NC_014029.1 Protein Homology CDS 230278 230898 . + 0 ID=cds228;Parent=gene232;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NC_014029.1 RefSeq gene 230924 231913 . + . ID=gene233;Name=YPZ3_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01170;old_locus_tag=YPZ3_0199 NC_014029.1 Protein Homology CDS 230924 231913 . + 0 ID=cds229;Parent=gene233;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NC_014029.1 RefSeq gene 231954 232343 . + . ID=gene234;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS01175;old_locus_tag=YPZ3_0200 NC_014029.1 Protein Homology CDS 231954 232343 . + 0 ID=cds230;Parent=gene234;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NC_014029.1 RefSeq gene 232790 233215 . + . ID=gene235;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YPZ3_RS01180;old_locus_tag=YPZ3_0201 NC_014029.1 Protein Homology CDS 232790 233215 . + 0 ID=cds231;Parent=gene235;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NC_014029.1 RefSeq gene 233303 233503 . + . ID=gene236;Name=YPZ3_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01185 NC_014029.1 Protein Homology CDS 233303 233503 . + 0 ID=cds232;Parent=gene236;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11 NC_014029.1 RefSeq gene 233613 234026 . - . ID=gene237;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YPZ3_RS01190;old_locus_tag=YPZ3_0202 NC_014029.1 Protein Homology CDS 233613 234026 . - 0 ID=cds233;Parent=gene237;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11 NC_014029.1 RefSeq gene 234165 235541 . - . ID=gene238;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=YPZ3_RS01195;old_locus_tag=YPZ3_0203 NC_014029.1 Protein Homology CDS 234165 235541 . - 0 ID=cds234;Parent=gene238;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11 NC_014029.1 RefSeq gene 235597 236886 . - . ID=gene239;Name=YPZ3_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01200;old_locus_tag=YPZ3_0204 NC_014029.1 Protein Homology CDS 235597 236886 . - 0 ID=cds235;Parent=gene239;Dbxref=Genbank:WP_002215705.1;Name=WP_002215705.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_002215705.1;transl_table=11 NC_014029.1 RefSeq gene 236980 237927 . - . ID=gene240;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YPZ3_RS01205;old_locus_tag=YPZ3_0205 NC_014029.1 Protein Homology CDS 236980 237927 . - 0 ID=cds236;Parent=gene240;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NC_014029.1 RefSeq gene 237952 238464 . - . ID=gene241;Name=YPZ3_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01210;old_locus_tag=YPZ3_0206 NC_014029.1 Protein Homology CDS 237952 238464 . - 0 ID=cds237;Parent=gene241;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NC_014029.1 RefSeq gene 238599 239720 . + . ID=gene242;Name=YPZ3_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01215;old_locus_tag=YPZ3_0207 NC_014029.1 Protein Homology CDS 238599 239720 . + 0 ID=cds238;Parent=gene242;Dbxref=Genbank:WP_002209022.1;Name=WP_002209022.1;gbkey=CDS;product=DNA processing protein DprA;protein_id=WP_002209022.1;transl_table=11 NC_014029.1 RefSeq gene 239692 240165 . + . ID=gene243;Name=YPZ3_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01220;old_locus_tag=YPZ3_0208 NC_014029.1 Protein Homology CDS 239692 240165 . + 0 ID=cds239;Parent=gene243;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11 NC_014029.1 RefSeq gene 240206 240745 . + . ID=gene244;Name=YPZ3_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01225;old_locus_tag=YPZ3_0209 NC_014029.1 Protein Homology CDS 240206 240745 . + 0 ID=cds240;Parent=gene244;Dbxref=Genbank:WP_002228134.1;Name=WP_002228134.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228134.1;transl_table=11 NC_014029.1 RefSeq gene 240747 241319 . + . ID=gene245;Name=YPZ3_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01230;old_locus_tag=YPZ3_0210 NC_014029.1 Protein Homology CDS 240747 241319 . + 0 ID=cds241;Parent=gene245;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11 NC_014029.1 RefSeq gene 241328 242149 . + . ID=gene246;Name=YPZ3_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01235;old_locus_tag=YPZ3_0211 NC_014029.1 Protein Homology CDS 241328 242149 . + 0 ID=cds242;Parent=gene246;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11 NC_014029.1 RefSeq gene 242204 242689 . - . ID=gene247;Name=YPZ3_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01240;old_locus_tag=YPZ3_0212 NC_014029.1 Protein Homology CDS 242204 242689 . - 0 ID=cds243;Parent=gene247;Dbxref=Genbank:WP_002215709.1;Name=WP_002215709.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002215709.1;transl_table=11 NC_014029.1 RefSeq repeat_region 242733 244689 . + . ID=id14;gbkey=repeat_region NC_014029.1 RefSeq gene 242801 243580 . - . ID=gene248;Name=YPZ3_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01245;old_locus_tag=YPZ3_0213 NC_014029.1 Protein Homology CDS 242801 243580 . - 0 ID=cds244;Parent=gene248;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 243580 244602 . - . ID=gene249;Name=YPZ3_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01250;old_locus_tag=YPZ3_0214 NC_014029.1 Protein Homology CDS 243580 244602 . - 0 ID=cds245;Parent=gene249;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 244661 245647 . + . ID=gene250;Name=YPZ3_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01255;old_locus_tag=YPZ3_0215 NC_014029.1 Protein Homology CDS 244661 245647 . + 0 ID=cds246;Parent=gene250;Dbxref=Genbank:WP_002209028.1;Name=WP_002209028.1;gbkey=CDS;product=hydrolase;protein_id=WP_002209028.1;transl_table=11 NC_014029.1 RefSeq gene 245721 247376 . - . ID=gene251;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YPZ3_RS01260;old_locus_tag=YPZ3_0216 NC_014029.1 Protein Homology CDS 245721 247376 . - 0 ID=cds247;Parent=gene251;Dbxref=Genbank:WP_002209029.1;Name=WP_002209029.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_002209029.1;transl_table=11 NC_014029.1 RefSeq gene 247373 247684 . - . ID=gene252;Name=YPZ3_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01265;old_locus_tag=YPZ3_0217 NC_014029.1 Protein Homology CDS 247373 247684 . - 0 ID=cds248;Parent=gene252;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11 NC_014029.1 RefSeq gene 247741 249699 . - . ID=gene253;Name=YPZ3_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01270;old_locus_tag=YPZ3_0218 NC_014029.1 Protein Homology CDS 247741 249699 . - 0 ID=cds249;Parent=gene253;Dbxref=Genbank:WP_002209031.1;Name=WP_002209031.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_002209031.1;transl_table=11 NC_014029.1 RefSeq gene 250600 251916 . + . ID=gene254;Name=YPZ3_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01275;old_locus_tag=YPZ3_0219 NC_014029.1 Protein Homology CDS 250600 251916 . + 0 ID=cds250;Parent=gene254;Dbxref=Genbank:WP_002209033.1;Name=WP_002209033.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_002209033.1;transl_table=11 NC_014029.1 RefSeq gene 252094 252726 . - . ID=gene255;Name=YPZ3_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01280;old_locus_tag=YPZ3_0220 NC_014029.1 Protein Homology CDS 252094 252726 . - 0 ID=cds251;Parent=gene255;Dbxref=Genbank:WP_002209034.1;Name=WP_002209034.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209034.1;transl_table=11 NC_014029.1 RefSeq gene 252739 255558 . - . ID=gene256;Name=YPZ3_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01285;old_locus_tag=YPZ3_0221 NC_014029.1 Protein Homology CDS 252739 255558 . - 0 ID=cds252;Parent=gene256;Dbxref=Genbank:WP_002209035.1;Name=WP_002209035.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_002209035.1;transl_table=11 NC_014029.1 RefSeq gene 255802 257301 . + . ID=gene257;Name=YPZ3_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01290;old_locus_tag=YPZ3_0222 NC_014029.1 Protein Homology CDS 255802 257301 . + 0 ID=cds253;Parent=gene257;Dbxref=Genbank:WP_002353603.1;Name=WP_002353603.1;gbkey=CDS;product=type II secretory pathway protein;protein_id=WP_002353603.1;transl_table=11 NC_014029.1 RefSeq gene 257303 258517 . + . ID=gene258;Name=YPZ3_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01295;old_locus_tag=YPZ3_0223 NC_014029.1 Protein Homology CDS 257303 258517 . + 0 ID=cds254;Parent=gene258;Dbxref=Genbank:WP_002209037.1;Name=WP_002209037.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_002209037.1;transl_table=11 NC_014029.1 RefSeq gene 258536 258757 . + . ID=gene259;Name=YPZ3_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01300 NC_014029.1 Protein Homology CDS 258536 258757 . + 0 ID=cds255;Parent=gene259;Dbxref=Genbank:WP_002209038.1;Name=WP_002209038.1;gbkey=CDS;product=type III secretion system protein%2C YseE family;protein_id=WP_002209038.1;transl_table=11 NC_014029.1 RefSeq gene 258931 259551 . + . ID=gene260;Name=YPZ3_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01305;old_locus_tag=YPZ3_0224 NC_014029.1 Protein Homology CDS 258931 259551 . + 0 ID=cds256;Parent=gene260;Dbxref=Genbank:WP_002216326.1;Name=WP_002216326.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002216326.1;transl_table=11 NC_014029.1 RefSeq gene 259561 259776 . + . ID=gene261;Name=YPZ3_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01310 NC_014029.1 Protein Homology CDS 259561 259776 . + 0 ID=cds257;Parent=gene261;Dbxref=Genbank:WP_002216328.1;Name=WP_002216328.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002216328.1;transl_table=11 NC_014029.1 RefSeq gene 259773 260021 . + . ID=gene262;Name=YPZ3_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01315 NC_014029.1 Protein Homology CDS 259773 260021 . + 0 ID=cds258;Parent=gene262;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11 NC_014029.1 RefSeq gene 260119 260370 . + . ID=gene263;Name=YPZ3_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01320 NC_014029.1 Protein Homology CDS 260119 260370 . + 0 ID=cds259;Parent=gene263;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11 NC_014029.1 RefSeq gene 260367 261098 . + . ID=gene264;Name=YPZ3_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01325;old_locus_tag=YPZ3_0225 NC_014029.1 Protein Homology CDS 260367 261098 . + 0 ID=cds260;Parent=gene264;Dbxref=Genbank:WP_002209042.1;Name=WP_002209042.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_002209042.1;transl_table=11 NC_014029.1 RefSeq gene 261273 261866 . + . ID=gene265;Name=YPZ3_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01330;old_locus_tag=YPZ3_0226 NC_014029.1 Protein Homology CDS 261273 261866 . + 0 ID=cds261;Parent=gene265;Dbxref=Genbank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209043.1;transl_table=11 NC_014029.1 RefSeq gene 261863 262510 . + . ID=gene266;Name=YPZ3_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01335;old_locus_tag=YPZ3_0227 NC_014029.1 Protein Homology CDS 261863 262510 . + 0 ID=cds262;Parent=gene266;Dbxref=Genbank:WP_002216333.1;Name=WP_002216333.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_002216333.1;transl_table=11 NC_014029.1 RefSeq gene 262497 264551 . + . ID=gene267;Name=YPZ3_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01340;old_locus_tag=YPZ3_0228 NC_014029.1 Protein Homology CDS 262497 264551 . + 0 ID=cds263;Parent=gene267;Dbxref=Genbank:WP_002356788.1;Name=WP_002356788.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_002356788.1;transl_table=11 NC_014029.1 RefSeq gene 264538 265875 . + . ID=gene268;Name=YPZ3_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01345;old_locus_tag=YPZ3_0229 NC_014029.1 Protein Homology CDS 264538 265875 . + 0 ID=cds264;Parent=gene268;Dbxref=Genbank:WP_002209046.1;Name=WP_002209046.1;gbkey=CDS;product=type III secretion system ATPase;protein_id=WP_002209046.1;transl_table=11 NC_014029.1 RefSeq gene 265872 266273 . + . ID=gene269;Name=YPZ3_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01350;old_locus_tag=YPZ3_0230 NC_014029.1 Protein Homology CDS 265872 266273 . + 0 ID=cds265;Parent=gene269;Dbxref=Genbank:WP_002209047.1;Name=WP_002209047.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209047.1;transl_table=11 NC_014029.1 RefSeq gene 266254 266652 . + . ID=gene270;Name=YPZ3_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01355;old_locus_tag=YPZ3_0231 NC_014029.1 Protein Homology CDS 266254 266652 . + 0 ID=cds266;Parent=gene270;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NC_014029.1 RefSeq gene 266630 267592 . + . ID=gene271;Name=YPZ3_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01360;old_locus_tag=YPZ3_0232 NC_014029.1 Protein Homology CDS 266630 267592 . + 0 ID=cds267;Parent=gene271;Dbxref=Genbank:WP_002209049.1;Name=WP_002209049.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_002209049.1;transl_table=11 NC_014029.1 RefSeq gene 267719 268369 . + . ID=gene272;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPZ3_RS01365;old_locus_tag=YPZ3_0233 NC_014029.1 Protein Homology CDS 267719 268369 . + 0 ID=cds268;Parent=gene272;Dbxref=Genbank:WP_002221023.1;Name=WP_002221023.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=flagellar biosynthesis protein FliP;protein_id=WP_002221023.1;transl_table=11 NC_014029.1 RefSeq gene 268366 268659 . + . ID=gene273;Name=YPZ3_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01370 NC_014029.1 Protein Homology CDS 268366 268659 . + 0 ID=cds269;Parent=gene273;Dbxref=Genbank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_002209051.1;transl_table=11 NC_014029.1 RefSeq gene 268661 269455 . + . ID=gene274;Name=YPZ3_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01375;old_locus_tag=YPZ3_0234 NC_014029.1 Protein Homology CDS 268661 269455 . + 0 ID=cds270;Parent=gene274;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11 NC_014029.1 RefSeq gene 269445 270512 . + . ID=gene275;Name=YPZ3_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01380;old_locus_tag=YPZ3_0235 NC_014029.1 Protein Homology CDS 269445 270512 . + 0 ID=cds271;Parent=gene275;Dbxref=Genbank:WP_002209053.1;Name=WP_002209053.1;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_002209053.1;transl_table=11 NC_014029.1 RefSeq repeat_region 270631 270802 . + . ID=id15;gbkey=repeat_region NC_014029.1 RefSeq gene 270895 272109 . + . ID=gene276;Name=YPZ3_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01385;old_locus_tag=YPZ3_0236 NC_014029.1 Protein Homology CDS 270895 272109 . + 0 ID=cds272;Parent=gene276;Dbxref=Genbank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209054.1;transl_table=11 NC_014029.1 RefSeq gene 272106 272375 . + . ID=gene277;Name=YPZ3_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01390 NC_014029.1 Protein Homology CDS 272106 272375 . + 0 ID=cds273;Parent=gene277;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11 NC_014029.1 RefSeq gene 272453 273436 . - . ID=gene278;Name=YPZ3_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01395;old_locus_tag=YPZ3_0237 NC_014029.1 Protein Homology CDS 272453 273436 . - 0 ID=cds274;Parent=gene278;Dbxref=Genbank:WP_002209056.1;Name=WP_002209056.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11 NC_014029.1 RefSeq gene 273606 274892 . + . ID=gene279;Name=YPZ3_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01400;old_locus_tag=YPZ3_0238 NC_014029.1 Protein Homology CDS 273606 274892 . + 0 ID=cds275;Parent=gene279;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11 NC_014029.1 RefSeq gene 274938 276119 . + . ID=gene280;Name=YPZ3_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01405;old_locus_tag=YPZ3_0239 NC_014029.1 Protein Homology CDS 274938 276119 . + 0 ID=cds276;Parent=gene280;Dbxref=Genbank:WP_002215044.1;Name=WP_002215044.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002215044.1;transl_table=11 NC_014029.1 RefSeq gene 276260 277060 . - . ID=gene281;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=YPZ3_RS01410;old_locus_tag=YPZ3_0240 NC_014029.1 Protein Homology CDS 276260 277060 . - 0 ID=cds277;Parent=gene281;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11 NC_014029.1 RefSeq gene 277053 278057 . - . ID=gene282;Name=YPZ3_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01415;old_locus_tag=YPZ3_0241 NC_014029.1 Protein Homology CDS 277053 278057 . - 0 ID=cds278;Parent=gene282;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NC_014029.1 RefSeq gene 278054 278893 . - . ID=gene283;Name=YPZ3_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01420;old_locus_tag=YPZ3_0242 NC_014029.1 Protein Homology CDS 278054 278893 . - 0 ID=cds279;Parent=gene283;Dbxref=Genbank:WP_002209060.1;Name=WP_002209060.1;gbkey=CDS;product=hemin-binding periplasmic protein HmuT;protein_id=WP_002209060.1;transl_table=11 NC_014029.1 RefSeq gene 278890 279927 . - . ID=gene284;Name=YPZ3_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01425;old_locus_tag=YPZ3_0243 NC_014029.1 Protein Homology CDS 278890 279927 . - 0 ID=cds280;Parent=gene284;Dbxref=Genbank:WP_002209061.1;Name=WP_002209061.1;gbkey=CDS;product=hemin transporter HmuS;protein_id=WP_002209061.1;transl_table=11 NC_014029.1 RefSeq gene 280046 282076 . - . ID=gene285;Name=YPZ3_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01430;old_locus_tag=YPZ3_0244 NC_014029.1 Protein Homology CDS 280046 282076 . - 0 ID=cds281;Parent=gene285;Dbxref=Genbank:WP_002209062.1;Name=WP_002209062.1;gbkey=CDS;product=hemin receptor;protein_id=WP_002209062.1;transl_table=11 NC_014029.1 RefSeq gene 282491 283141 . - . ID=gene286;Name=YPZ3_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01435;old_locus_tag=YPZ3_0245 NC_014029.1 Protein Homology CDS 282491 283141 . - 0 ID=cds282;Parent=gene286;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11 NC_014029.1 RefSeq gene 283175 283684 . - . ID=gene287;Name=YPZ3_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01440;old_locus_tag=YPZ3_0246 NC_014029.1 Protein Homology CDS 283175 283684 . - 0 ID=cds283;Parent=gene287;Dbxref=Genbank:WP_002209065.1;Name=WP_002209065.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_002209065.1;transl_table=11 NC_014029.1 RefSeq gene 283717 285030 . - . ID=gene288;Name=YPZ3_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01445;old_locus_tag=YPZ3_0247 NC_014029.1 Protein Homology CDS 283717 285030 . - 0 ID=cds284;Parent=gene288;Dbxref=Genbank:WP_002209066.1;Name=WP_002209066.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=heme utilization radical SAM enzyme HutW;protein_id=WP_002209066.1;transl_table=11 NC_014029.1 RefSeq gene 285371 286171 . - . ID=gene289;Name=YPZ3_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01450;old_locus_tag=YPZ3_0248 NC_014029.1 Protein Homology CDS 285371 286171 . - 0 ID=cds285;Parent=gene289;Dbxref=Genbank:WP_002209067.1;Name=WP_002209067.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NC_014029.1 RefSeq gene 286486 286974 . - . ID=gene290;Name=YPZ3_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01455;old_locus_tag=YPZ3_0249 NC_014029.1 Protein Homology CDS 286486 286974 . - 0 ID=cds286;Parent=gene290;Dbxref=Genbank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NC_014029.1 RefSeq gene 287371 288330 . - . ID=gene291;Name=YPZ3_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01460;old_locus_tag=YPZ3_0250 NC_014029.1 Protein Homology CDS 287371 288330 . - 0 ID=cds287;Parent=gene291;Dbxref=Genbank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209069.1;transl_table=11 NC_014029.1 RefSeq gene 288330 289409 . - . ID=gene292;Name=YPZ3_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01465;old_locus_tag=YPZ3_0251 NC_014029.1 Protein Homology CDS 288330 289409 . - 0 ID=cds288;Parent=gene292;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11 NC_014029.1 RefSeq gene 289402 290214 . - . ID=gene293;Name=YPZ3_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01470;old_locus_tag=YPZ3_0252 NC_014029.1 Protein Homology CDS 289402 290214 . - 0 ID=cds289;Parent=gene293;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11 NC_014029.1 RefSeq gene 290207 291343 . - . ID=gene294;Name=YPZ3_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01475;old_locus_tag=YPZ3_0253 NC_014029.1 Protein Homology CDS 290207 291343 . - 0 ID=cds290;Parent=gene294;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11 NC_014029.1 RefSeq gene 291355 292416 . - . ID=gene295;Name=YPZ3_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01480;old_locus_tag=YPZ3_0254 NC_014029.1 Protein Homology CDS 291355 292416 . - 0 ID=cds291;Parent=gene295;Dbxref=Genbank:WP_002209073.1;Name=WP_002209073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209073.1;transl_table=11 NC_014029.1 RefSeq gene 292692 293285 . + . ID=gene296;Name=YPZ3_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01485;old_locus_tag=YPZ3_0255 NC_014029.1 Protein Homology CDS 292692 293285 . + 0 ID=cds292;Parent=gene296;Dbxref=Genbank:WP_002228131.1;Name=WP_002228131.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_002228131.1;transl_table=11 NC_014029.1 RefSeq gene 293285 294469 . + . ID=gene297;Name=YPZ3_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01490;old_locus_tag=YPZ3_0256 NC_014029.1 Protein Homology CDS 293285 294469 . + 0 ID=cds293;Parent=gene297;Dbxref=Genbank:WP_002209075.1;Name=WP_002209075.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209075.1;transl_table=11 NC_014029.1 RefSeq gene 294502 294957 . + . ID=gene298;Name=YPZ3_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01495;old_locus_tag=YPZ3_0257 NC_014029.1 Protein Homology CDS 294502 294957 . + 0 ID=cds294;Parent=gene298;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11 NC_014029.1 RefSeq gene 294979 296016 . + . ID=gene299;Name=YPZ3_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01500;old_locus_tag=YPZ3_0258 NC_014029.1 Protein Homology CDS 294979 296016 . + 0 ID=cds295;Parent=gene299;Dbxref=Genbank:WP_002209077.1;Name=WP_002209077.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_002209077.1;transl_table=11 NC_014029.1 RefSeq gene 296080 296658 . + . ID=gene300;Name=YPZ3_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01505;old_locus_tag=YPZ3_0259 NC_014029.1 Protein Homology CDS 296080 296658 . + 0 ID=cds296;Parent=gene300;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11 NC_014029.1 RefSeq gene 296842 297417 . + . ID=gene301;Name=YPZ3_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01510;old_locus_tag=YPZ3_0260 NC_014029.1 Protein Homology CDS 296842 297417 . + 0 ID=cds297;Parent=gene301;Dbxref=Genbank:WP_002209079.1;Name=WP_002209079.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_002209079.1;transl_table=11 NC_014029.1 RefSeq gene 298130 298768 . + . ID=gene302;Name=YPZ3_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01515;old_locus_tag=YPZ3_0261 NC_014029.1 Protein Homology CDS 298130 298768 . + 0 ID=cds298;Parent=gene302;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11 NC_014029.1 RefSeq gene 299019 301397 . + . ID=gene303;Name=YPZ3_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01520;old_locus_tag=YPZ3_0262 NC_014029.1 Protein Homology CDS 299019 301397 . + 0 ID=cds299;Parent=gene303;Dbxref=Genbank:WP_002209081.1;Name=WP_002209081.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209081.1;transl_table=11 NC_014029.1 RefSeq gene 301469 302212 . + . ID=gene304;Name=YPZ3_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01525;old_locus_tag=YPZ3_0263 NC_014029.1 Protein Homology CDS 301469 302212 . + 0 ID=cds300;Parent=gene304;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11 NC_014029.1 RefSeq gene 302223 302477 . + . ID=gene305;Name=YPZ3_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01530 NC_014029.1 Protein Homology CDS 302223 302477 . + 0 ID=cds301;Parent=gene305;Dbxref=Genbank:WP_002214631.1;Name=WP_002214631.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214631.1;transl_table=11 NC_014029.1 RefSeq gene 303670 304989 . + . ID=gene306;Name=YPZ3_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01535;old_locus_tag=YPZ3_0264 NC_014029.1 Protein Homology CDS 303670 304989 . + 0 ID=cds302;Parent=gene306;Dbxref=Genbank:WP_002214633.1;Name=WP_002214633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214633.1;transl_table=11 NC_014029.1 RefSeq gene 305506 305709 . + . ID=gene307;Name=YPZ3_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01540 NC_014029.1 Protein Homology CDS 305506 305709 . + 0 ID=cds303;Parent=gene307;Dbxref=Genbank:WP_002228683.1;Name=WP_002228683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228683.1;transl_table=11 NC_014029.1 RefSeq gene 305998 308055 . + . ID=gene308;Name=YPZ3_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01545;old_locus_tag=YPZ3_0265 NC_014029.1 Protein Homology CDS 305998 308055 . + 0 ID=cds304;Parent=gene308;Dbxref=Genbank:WP_002209085.1;Name=WP_002209085.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002209085.1;transl_table=11 NC_014029.1 RefSeq repeat_region 308078 308252 . + . ID=id16;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 308391 310529 . + . ID=id17;gbkey=repeat_region NC_014029.1 RefSeq gene 308399 312208 . - . ID=gene309;Name=YPZ3_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01550;old_locus_tag=YPZ3_0266 NC_014029.1 Protein Homology CDS 308399 312208 . - 0 ID=cds305;Parent=gene309;Dbxref=Genbank:WP_002221634.1;Name=WP_002221634.1;gbkey=CDS;product=autotransporter;protein_id=WP_002221634.1;transl_table=11 NC_014029.1 RefSeq gene 313040 313564 . + . ID=gene310;Name=YPZ3_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01555;old_locus_tag=YPZ3_0267 NC_014029.1 Protein Homology CDS 313040 313564 . + 0 ID=cds306;Parent=gene310;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11 NC_014029.1 RefSeq gene 313730 314596 . + . ID=gene311;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YPZ3_RS01560;old_locus_tag=YPZ3_0268 NC_014029.1 Protein Homology CDS 313730 314596 . + 0 ID=cds307;Parent=gene311;Dbxref=Genbank:WP_002209088.1;Name=WP_002209088.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_002209088.1;transl_table=11 NC_014029.1 RefSeq gene 314777 317254 . - . ID=gene312;Name=YPZ3_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01565;old_locus_tag=YPZ3_0269 NC_014029.1 Protein Homology CDS 314777 317254 . - 0 ID=cds308;Parent=gene312;Dbxref=Genbank:WP_002214644.1;Name=WP_002214644.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002214644.1;transl_table=11 NC_014029.1 RefSeq gene 317382 317753 . + . ID=gene313;Name=YPZ3_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01570;old_locus_tag=YPZ3_0270 NC_014029.1 Protein Homology CDS 317382 317753 . + 0 ID=cds309;Parent=gene313;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NC_014029.1 RefSeq gene 317878 318486 . + . ID=gene314;Name=YPZ3_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01575;old_locus_tag=YPZ3_0271 NC_014029.1 Protein Homology CDS 317878 318486 . + 0 ID=cds310;Parent=gene314;Dbxref=Genbank:WP_002209090.1;Name=WP_002209090.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_002209090.1;transl_table=11 NC_014029.1 RefSeq gene 318688 319197 . - . ID=gene315;Name=YPZ3_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01580;old_locus_tag=YPZ3_0272 NC_014029.1 Protein Homology CDS 318688 319197 . - 0 ID=cds311;Parent=gene315;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11 NC_014029.1 RefSeq gene 319452 320489 . + . ID=gene316;Name=YPZ3_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01585;old_locus_tag=YPZ3_0273 NC_014029.1 Protein Homology CDS 319452 320489 . + 0 ID=cds312;Parent=gene316;Dbxref=Genbank:WP_002209092.1;Name=WP_002209092.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_002209092.1;transl_table=11 NC_014029.1 RefSeq gene 321005 321223 . + . ID=gene317;Name=YPZ3_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01590 NC_014029.1 Protein Homology CDS 321005 321223 . + 0 ID=cds313;Parent=gene317;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11 NC_014029.1 RefSeq gene 321568 322551 . - . ID=gene318;Name=YPZ3_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01595;old_locus_tag=YPZ3_0274 NC_014029.1 Protein Homology CDS 321568 322551 . - 0 ID=cds314;Parent=gene318;Dbxref=Genbank:WP_002209094.1;Name=WP_002209094.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002209094.1;transl_table=11 NC_014029.1 RefSeq gene 322883 324289 . + . ID=gene319;Name=YPZ3_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01600;old_locus_tag=YPZ3_0275 NC_014029.1 Protein Homology CDS 322883 324289 . + 0 ID=cds315;Parent=gene319;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NC_014029.1 RefSeq gene 324386 325465 . + . ID=gene320;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPZ3_RS01605;old_locus_tag=YPZ3_0276 NC_014029.1 Protein Homology CDS 324386 325465 . + 0 ID=cds316;Parent=gene320;Dbxref=Genbank:WP_002209096.1;Name=WP_002209096.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_002209096.1;transl_table=11 NC_014029.1 RefSeq gene 325651 326844 . + . ID=gene321;Name=YPZ3_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01610;old_locus_tag=YPZ3_0277 NC_014029.1 Protein Homology CDS 325651 326844 . + 0 ID=cds317;Parent=gene321;Dbxref=Genbank:WP_002209097.1;Name=WP_002209097.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002209097.1;transl_table=11 NC_014029.1 RefSeq gene 327371 327730 . + . ID=gene322;Name=YPZ3_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01615;old_locus_tag=YPZ3_0278 NC_014029.1 Protein Homology CDS 327371 327730 . + 0 ID=cds318;Parent=gene322;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11 NC_014029.1 RefSeq gene 327823 330666 . - . ID=gene323;Name=YPZ3_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01620;old_locus_tag=YPZ3_0279 NC_014029.1 Protein Homology CDS 327823 330666 . - 0 ID=cds319;Parent=gene323;Dbxref=Genbank:WP_002209099.1;Name=WP_002209099.1;gbkey=CDS;product=UvrABC system protein A;protein_id=WP_002209099.1;transl_table=11 NC_014029.1 RefSeq gene 331124 331672 . + . ID=gene324;Name=YPZ3_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01625;old_locus_tag=YPZ3_0280 NC_014029.1 Protein Homology CDS 331124 331672 . + 0 ID=cds320;Parent=gene324;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11 NC_014029.1 RefSeq gene 331919 332233 . - . ID=gene325;Name=YPZ3_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01630;old_locus_tag=YPZ3_0281 NC_014029.1 Protein Homology CDS 331919 332233 . - 0 ID=cds321;Parent=gene325;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NC_014029.1 RefSeq gene 332247 333395 . - . ID=gene326;Name=YPZ3_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01635;old_locus_tag=YPZ3_0282 NC_014029.1 Protein Homology CDS 332247 333395 . - 0 ID=cds322;Parent=gene326;Dbxref=Genbank:WP_002209102.1;Name=WP_002209102.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002209102.1;transl_table=11 NC_014029.1 RefSeq gene 333462 334286 . - . ID=gene327;Name=YPZ3_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01640;old_locus_tag=YPZ3_0283 NC_014029.1 Protein Homology CDS 333462 334286 . - 0 ID=cds323;Parent=gene327;Dbxref=Genbank:WP_002209103.1;Name=WP_002209103.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_002209103.1;transl_table=11 NC_014029.1 RefSeq gene 334299 335555 . - . ID=gene328;Name=YPZ3_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01645;old_locus_tag=YPZ3_0284 NC_014029.1 Protein Homology CDS 334299 335555 . - 0 ID=cds324;Parent=gene328;Dbxref=Genbank:WP_002209104.1;Name=WP_002209104.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_002209104.1;transl_table=11 NC_014029.1 RefSeq gene 335552 337009 . - . ID=gene329;Name=YPZ3_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01650;old_locus_tag=YPZ3_0285 NC_014029.1 Protein Homology CDS 335552 337009 . - 0 ID=cds325;Parent=gene329;Dbxref=Genbank:WP_002209105.1;Name=WP_002209105.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_002209105.1;transl_table=11 NC_014029.1 RefSeq gene 337008 337214 . + . ID=gene330;Name=YPZ3_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01655 NC_014029.1 Protein Homology CDS 337008 337214 . + 0 ID=cds326;Parent=gene330;Dbxref=Genbank:WP_002209106.1;Name=WP_002209106.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_002209106.1;transl_table=11 NC_014029.1 RefSeq gene 337211 337354 . + . ID=gene331;Name=YPZ3_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01660 NC_014029.1 Protein Homology CDS 337211 337354 . + 0 ID=cds327;Parent=gene331;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11 NC_014029.1 RefSeq gene 337436 338257 . + . ID=gene332;Name=YPZ3_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01665;old_locus_tag=YPZ3_0286 NC_014029.1 Protein Homology CDS 337436 338257 . + 0 ID=cds328;Parent=gene332;Dbxref=Genbank:WP_002209108.1;Name=WP_002209108.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_002209108.1;transl_table=11 NC_014029.1 RefSeq gene 338390 339262 . + . ID=gene333;Name=YPZ3_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01670;old_locus_tag=YPZ3_0287 NC_014029.1 Protein Homology CDS 338390 339262 . + 0 ID=cds329;Parent=gene333;Dbxref=Genbank:WP_002209110.1;Name=WP_002209110.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_002209110.1;transl_table=11 NC_014029.1 RefSeq gene 339411 340445 . - . ID=gene334;Name=YPZ3_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01675;old_locus_tag=YPZ3_0288 NC_014029.1 Protein Homology CDS 339411 340445 . - 0 ID=cds330;Parent=gene334;Dbxref=Genbank:WP_002209111.1;Name=WP_002209111.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_002209111.1;transl_table=11 NC_014029.1 RefSeq gene 340599 340865 . + . ID=gene335;Name=YPZ3_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01680 NC_014029.1 Protein Homology CDS 340599 340865 . + 0 ID=cds331;Parent=gene335;Dbxref=Genbank:WP_002217947.1;Name=WP_002217947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217947.1;transl_table=11 NC_014029.1 RefSeq gene 341301 341726 . - . ID=gene336;Name=YPZ3_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01685;old_locus_tag=YPZ3_0289 NC_014029.1 Protein Homology CDS 341301 341726 . - 0 ID=cds332;Parent=gene336;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11 NC_014029.1 RefSeq gene 341956 342123 . + . ID=gene337;Name=YPZ3_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01690 NC_014029.1 Protein Homology CDS 341956 342123 . + 0 ID=cds333;Parent=gene337;Dbxref=Genbank:WP_002209114.1;Name=WP_002209114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209114.1;transl_table=11 NC_014029.1 RefSeq gene 342153 344708 . + . ID=gene338;Name=YPZ3_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01695;old_locus_tag=YPZ3_0290 NC_014029.1 Protein Homology CDS 342153 344708 . + 0 ID=cds334;Parent=gene338;Dbxref=Genbank:WP_002209115.1;Name=WP_002209115.1;gbkey=CDS;product=viral enhancin protein;protein_id=WP_002209115.1;transl_table=11 NC_014029.1 RefSeq gene 345279 346205 . + . ID=gene339;Name=YPZ3_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01700;old_locus_tag=YPZ3_0291 NC_014029.1 Protein Homology CDS 345279 346205 . + 0 ID=cds335;Parent=gene339;Dbxref=Genbank:WP_016260160.1;Name=WP_016260160.1;gbkey=CDS;product=chromosome partitioning ATPase;protein_id=WP_016260160.1;transl_table=11 NC_014029.1 RefSeq gene 346202 347557 . + . ID=gene340;Name=YPZ3_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01705;old_locus_tag=YPZ3_0292 NC_014029.1 Protein Homology CDS 346202 347557 . + 0 ID=cds336;Parent=gene340;Dbxref=Genbank:WP_013060251.1;Name=WP_013060251.1;Note=unwinds double stranded DNA;gbkey=CDS;product=DNA helicase;protein_id=WP_013060251.1;transl_table=11 NC_014029.1 RefSeq gene 347560 349287 . + . ID=gene341;Name=YPZ3_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01710;old_locus_tag=YPZ3_0293 NC_014029.1 Protein Homology CDS 347560 349287 . + 0 ID=cds337;Parent=gene341;Dbxref=Genbank:WP_013060252.1;Name=WP_013060252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060252.1;transl_table=11 NC_014029.1 RefSeq gene 349287 350003 . + . ID=gene342;Name=YPZ3_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01715;old_locus_tag=YPZ3_0294 NC_014029.1 Protein Homology CDS 349287 350003 . + 0 ID=cds338;Parent=gene342;Dbxref=Genbank:WP_013060253.1;Name=WP_013060253.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060253.1;transl_table=11 NC_014029.1 RefSeq gene 350008 350637 . + . ID=gene343;Name=YPZ3_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01720;old_locus_tag=YPZ3_0295 NC_014029.1 Protein Homology CDS 350008 350637 . + 0 ID=cds339;Parent=gene343;Dbxref=Genbank:WP_013060254.1;Name=WP_013060254.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060254.1;transl_table=11 NC_014029.1 RefSeq gene 350634 350897 . + . ID=gene344;Name=YPZ3_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01725 NC_014029.1 Protein Homology CDS 350634 350897 . + 0 ID=cds340;Parent=gene344;Dbxref=Genbank:WP_016260159.1;Name=WP_016260159.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260159.1;transl_table=11 NC_014029.1 RefSeq gene 351031 352302 . + . ID=gene345;Name=YPZ3_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01730;old_locus_tag=YPZ3_0296 NC_014029.1 Protein Homology CDS 351031 352302 . + 0 ID=cds341;Parent=gene345;Dbxref=Genbank:WP_013060255.1;Name=WP_013060255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060255.1;transl_table=11 NC_014029.1 RefSeq gene 352680 353423 . + . ID=gene346;Name=YPZ3_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01735;old_locus_tag=YPZ3_0297 NC_014029.1 Protein Homology CDS 352680 353423 . + 0 ID=cds342;Parent=gene346;Dbxref=Genbank:WP_013060256.1;Name=WP_013060256.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060256.1;transl_table=11 NC_014029.1 RefSeq gene 353420 353995 . + . ID=gene347;Name=YPZ3_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01740;old_locus_tag=YPZ3_0298 NC_014029.1 Protein Homology CDS 353420 353995 . + 0 ID=cds343;Parent=gene347;Dbxref=Genbank:WP_013060257.1;Name=WP_013060257.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060257.1;transl_table=11 NC_014029.1 RefSeq gene 354010 356049 . + . ID=gene348;Name=YPZ3_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01745;old_locus_tag=YPZ3_0299 NC_014029.1 Protein Homology CDS 354010 356049 . + 0 ID=cds344;Parent=gene348;Dbxref=Genbank:WP_013060258.1;Name=WP_013060258.1;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_013060258.1;transl_table=11 NC_014029.1 RefSeq gene 356718 357185 . + . ID=gene349;Name=YPZ3_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01750;old_locus_tag=YPZ3_0300 NC_014029.1 Protein Homology CDS 356718 357185 . + 0 ID=cds345;Parent=gene349;Dbxref=Genbank:WP_013060259.1;Name=WP_013060259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060259.1;transl_table=11 NC_014029.1 RefSeq gene 357260 357760 . + . ID=gene350;Name=YPZ3_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01755;old_locus_tag=YPZ3_0301 NC_014029.1 Protein Homology CDS 357260 357760 . + 0 ID=cds346;Parent=gene350;Dbxref=Genbank:WP_016260098.1;Name=WP_016260098.1;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_016260098.1;transl_table=11 NC_014029.1 RefSeq gene 357839 358273 . + . ID=gene351;Name=YPZ3_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01760;old_locus_tag=YPZ3_0302 NC_014029.1 Protein Homology CDS 357839 358273 . + 0 ID=cds347;Parent=gene351;Dbxref=Genbank:WP_013060261.1;Name=WP_013060261.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060261.1;transl_table=11 NC_014029.1 RefSeq gene 358410 359042 . + . ID=gene352;Name=YPZ3_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01765;old_locus_tag=YPZ3_0303 NC_014029.1 Protein Homology CDS 358410 359042 . + 0 ID=cds348;Parent=gene352;Dbxref=Genbank:WP_013060262.1;Name=WP_013060262.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060262.1;transl_table=11 NC_014029.1 RefSeq gene 359039 359782 . + . ID=gene353;Name=YPZ3_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01770;old_locus_tag=YPZ3_0304 NC_014029.1 Protein Homology CDS 359039 359782 . + 0 ID=cds349;Parent=gene353;Dbxref=Genbank:WP_013060263.1;Name=WP_013060263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060263.1;transl_table=11 NC_014029.1 RefSeq gene 359793 360503 . + . ID=gene354;Name=YPZ3_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01775;old_locus_tag=YPZ3_0305 NC_014029.1 Protein Homology CDS 359793 360503 . + 0 ID=cds350;Parent=gene354;Dbxref=Genbank:WP_013060264.1;Name=WP_013060264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060264.1;transl_table=11 NC_014029.1 RefSeq gene 360482 361174 . + . ID=gene355;Name=YPZ3_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01780;old_locus_tag=YPZ3_0306 NC_014029.1 Protein Homology CDS 360482 361174 . + 0 ID=cds351;Parent=gene355;Dbxref=Genbank:WP_013060265.1;Name=WP_013060265.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_013060265.1;transl_table=11 NC_014029.1 RefSeq gene 361177 361701 . + . ID=gene356;Name=YPZ3_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01785;old_locus_tag=YPZ3_0307 NC_014029.1 Protein Homology CDS 361177 361701 . + 0 ID=cds352;Parent=gene356;Dbxref=Genbank:WP_013060266.1;Name=WP_013060266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060266.1;transl_table=11 NC_014029.1 RefSeq gene 361698 362324 . + . ID=gene357;Name=YPZ3_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01790;old_locus_tag=YPZ3_0308 NC_014029.1 Protein Homology CDS 361698 362324 . + 0 ID=cds353;Parent=gene357;Dbxref=Genbank:WP_013060267.1;Name=WP_013060267.1;gbkey=CDS;product=restriction endonuclease;protein_id=WP_013060267.1;transl_table=11 NC_014029.1 RefSeq gene 362308 362838 . + . ID=gene358;Name=YPZ3_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01795;old_locus_tag=YPZ3_0309 NC_014029.1 Protein Homology CDS 362308 362838 . + 0 ID=cds354;Parent=gene358;Dbxref=Genbank:WP_013060268.1;Name=WP_013060268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060268.1;transl_table=11 NC_014029.1 RefSeq gene 362831 364945 . + . ID=gene359;Name=YPZ3_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01800;old_locus_tag=YPZ3_0310 NC_014029.1 Protein Homology CDS 362831 364945 . + 0 ID=cds355;Parent=gene359;Dbxref=Genbank:WP_013060269.1;Name=WP_013060269.1;gbkey=CDS;product=conjugal transfer protein TraG;protein_id=WP_013060269.1;transl_table=11 NC_014029.1 RefSeq gene 364926 365684 . + . ID=gene360;Name=YPZ3_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01805;old_locus_tag=YPZ3_0311 NC_014029.1 Protein Homology CDS 364926 365684 . + 0 ID=cds356;Parent=gene360;Dbxref=Genbank:WP_016260099.1;Name=WP_016260099.1;gbkey=CDS;product=membrane protein;protein_id=WP_016260099.1;transl_table=11 NC_014029.1 RefSeq gene 365919 366248 . + . ID=gene361;Name=YPZ3_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01810;old_locus_tag=YPZ3_0312 NC_014029.1 Protein Homology CDS 365919 366248 . + 0 ID=cds357;Parent=gene361;Dbxref=Genbank:WP_013060271.1;Name=WP_013060271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060271.1;transl_table=11 NC_014029.1 RefSeq gene 366248 366490 . + . ID=gene362;Name=YPZ3_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01815 NC_014029.1 Protein Homology CDS 366248 366490 . + 0 ID=cds358;Parent=gene362;Dbxref=Genbank:WP_016260100.1;Name=WP_016260100.1;gbkey=CDS;product=integrating conjugative element protein;protein_id=WP_016260100.1;transl_table=11 NC_014029.1 RefSeq gene 366559 366924 . + . ID=gene363;Name=YPZ3_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01820;old_locus_tag=YPZ3_0313 NC_014029.1 Protein Homology CDS 366559 366924 . + 0 ID=cds359;Parent=gene363;Dbxref=Genbank:WP_013060272.1;Name=WP_013060272.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060272.1;transl_table=11 NC_014029.1 RefSeq gene 366936 367301 . + . ID=gene364;Name=YPZ3_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01825;old_locus_tag=YPZ3_0314 NC_014029.1 Protein Homology CDS 366936 367301 . + 0 ID=cds360;Parent=gene364;Dbxref=Genbank:WP_013060273.1;Name=WP_013060273.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060273.1;transl_table=11 NC_014029.1 RefSeq gene 367298 367969 . + . ID=gene365;Name=YPZ3_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01830;old_locus_tag=YPZ3_0315 NC_014029.1 Protein Homology CDS 367298 367969 . + 0 ID=cds361;Parent=gene365;Dbxref=Genbank:WP_013060274.1;Name=WP_013060274.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060274.1;transl_table=11 NC_014029.1 RefSeq gene 367966 368877 . + . ID=gene366;Name=YPZ3_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01835;old_locus_tag=YPZ3_0316 NC_014029.1 Protein Homology CDS 367966 368877 . + 0 ID=cds362;Parent=gene366;Dbxref=Genbank:WP_013060275.1;Name=WP_013060275.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060275.1;transl_table=11 NC_014029.1 RefSeq gene 368870 370366 . + . ID=gene367;Name=YPZ3_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01840;old_locus_tag=YPZ3_0317 NC_014029.1 Protein Homology CDS 368870 370366 . + 0 ID=cds363;Parent=gene367;Dbxref=Genbank:WP_013060276.1;Name=WP_013060276.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060276.1;transl_table=11 NC_014029.1 RefSeq gene 370523 370948 . + . ID=gene368;Name=YPZ3_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01845 NC_014029.1 Protein Homology CDS 370523 370948 . + 0 ID=cds364;Parent=gene368;Dbxref=Genbank:WP_025476361.1;Name=WP_025476361.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_025476361.1;transl_table=11 NC_014029.1 RefSeq gene 370948 373806 . + . ID=gene369;Name=YPZ3_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01850;old_locus_tag=YPZ3_0319 NC_014029.1 Protein Homology CDS 370948 373806 . + 0 ID=cds365;Parent=gene369;Dbxref=Genbank:WP_013060278.1;Name=WP_013060278.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_013060278.1;transl_table=11 NC_014029.1 RefSeq gene 373803 374207 . + . ID=gene370;Name=YPZ3_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01855 NC_014029.1 Protein Homology CDS 373803 374207 . + 0 ID=cds366;Parent=gene370;Dbxref=Genbank:WP_016191724.1;Name=WP_016191724.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016191724.1;transl_table=11 NC_014029.1 RefSeq gene 374368 374661 . + . ID=gene371;Name=YPZ3_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01860 NC_014029.1 Protein Homology CDS 374368 374661 . + 0 ID=cds367;Parent=gene371;Dbxref=Genbank:WP_016260101.1;Name=WP_016260101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260101.1;transl_table=11 NC_014029.1 RefSeq gene 375097 378357 . + . ID=gene372;Name=YPZ3_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01865;old_locus_tag=YPZ3_0320 NC_014029.1 Protein Homology CDS 375097 378357 . + 0 ID=cds368;Parent=gene372;Dbxref=Genbank:WP_013060279.1;Name=WP_013060279.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060279.1;transl_table=11 NC_014029.1 RefSeq gene 378540 378944 . + . ID=gene373;Name=YPZ3_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01870;old_locus_tag=YPZ3_0321 NC_014029.1 Protein Homology CDS 378540 378944 . + 0 ID=cds369;Parent=gene373;Dbxref=Genbank:WP_013060280.1;Name=WP_013060280.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060280.1;transl_table=11 NC_014029.1 RefSeq gene 378946 379953 . + . ID=gene374;Name=YPZ3_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01875;old_locus_tag=YPZ3_0322 NC_014029.1 Protein Homology CDS 378946 379953 . + 0 ID=cds370;Parent=gene374;Dbxref=Genbank:WP_013060281.1;Name=WP_013060281.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060281.1;transl_table=11 NC_014029.1 RefSeq gene 379964 381445 . + . ID=gene375;Name=YPZ3_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01880;old_locus_tag=YPZ3_0323 NC_014029.1 Protein Homology CDS 379964 381445 . + 0 ID=cds371;Parent=gene375;Dbxref=Genbank:WP_013060282.1;Name=WP_013060282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060282.1;transl_table=11 NC_014029.1 RefSeq gene 381462 381833 . + . ID=gene376;Name=YPZ3_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01885 NC_014029.1 Protein Homology CDS 381462 381833 . + 0 ID=cds372;Parent=gene376;Dbxref=Genbank:WP_016260102.1;Name=WP_016260102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260102.1;transl_table=11 NC_014029.1 RefSeq gene 381830 383368 . + . ID=gene377;Name=YPZ3_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01890;old_locus_tag=YPZ3_0324 NC_014029.1 Protein Homology CDS 381830 383368 . + 0 ID=cds373;Parent=gene377;Dbxref=Genbank:WP_013060283.1;Name=WP_013060283.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060283.1;transl_table=11 NC_014029.1 RefSeq gene 383405 383806 . - . ID=gene378;Name=YPZ3_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01895;old_locus_tag=YPZ3_0325 NC_014029.1 Protein Homology CDS 383405 383806 . - 0 ID=cds374;Parent=gene378;Dbxref=Genbank:WP_013060284.1;Name=WP_013060284.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060284.1;transl_table=11 NC_014029.1 RefSeq gene 384018 384575 . + . ID=gene379;Name=YPZ3_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01900;old_locus_tag=YPZ3_0326 NC_014029.1 Protein Homology CDS 384018 384575 . + 0 ID=cds375;Parent=gene379;Dbxref=Genbank:WP_013060285.1;Name=WP_013060285.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060285.1;transl_table=11 NC_014029.1 RefSeq gene 384591 384935 . + . ID=gene380;Name=YPZ3_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01905;old_locus_tag=YPZ3_0327 NC_014029.1 Protein Homology CDS 384591 384935 . + 0 ID=cds376;Parent=gene380;Dbxref=Genbank:WP_013060286.1;Name=WP_013060286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060286.1;transl_table=11 NC_014029.1 RefSeq gene 384937 385200 . + . ID=gene381;Name=YPZ3_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01910 NC_014029.1 Protein Homology CDS 384937 385200 . + 0 ID=cds377;Parent=gene381;Dbxref=Genbank:WP_016260103.1;Name=WP_016260103.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260103.1;transl_table=11 NC_014029.1 RefSeq gene 386260 387159 . + . ID=gene382;Name=YPZ3_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01915;old_locus_tag=YPZ3_0328 NC_014029.1 Protein Homology CDS 386260 387159 . + 0 ID=cds378;Parent=gene382;Dbxref=Genbank:WP_016260104.1;Name=WP_016260104.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_016260104.1;transl_table=11 NC_014029.1 RefSeq gene 387692 388012 . + . ID=gene383;Name=YPZ3_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01920;old_locus_tag=YPZ3_0329 NC_014029.1 Protein Homology CDS 387692 388012 . + 0 ID=cds379;Parent=gene383;Dbxref=Genbank:WP_013060288.1;Name=WP_013060288.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060288.1;transl_table=11 NC_014029.1 RefSeq gene 388103 388501 . + . ID=gene384;Name=YPZ3_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01925;old_locus_tag=YPZ3_0330 NC_014029.1 Protein Homology CDS 388103 388501 . + 0 ID=cds380;Parent=gene384;Dbxref=Genbank:WP_013060289.1;Name=WP_013060289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060289.1;transl_table=11 NC_014029.1 RefSeq gene 388618 389085 . + . ID=gene385;Name=YPZ3_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01930;old_locus_tag=YPZ3_0331 NC_014029.1 Protein Homology CDS 388618 389085 . + 0 ID=cds381;Parent=gene385;Dbxref=Genbank:WP_013060290.1;Name=WP_013060290.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060290.1;transl_table=11 NC_014029.1 RefSeq gene 389174 389776 . + . ID=gene386;Name=YPZ3_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01935;old_locus_tag=YPZ3_0332 NC_014029.1 Protein Homology CDS 389174 389776 . + 0 ID=cds382;Parent=gene386;Dbxref=Genbank:WP_013060291.1;Name=WP_013060291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060291.1;transl_table=11 NC_014029.1 RefSeq gene 389851 390861 . + . ID=gene387;Name=YPZ3_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01940;old_locus_tag=YPZ3_0333 NC_014029.1 Protein Homology CDS 389851 390861 . + 0 ID=cds383;Parent=gene387;Dbxref=Genbank:WP_013060292.1;Name=WP_013060292.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060292.1;transl_table=11 NC_014029.1 RefSeq gene 390873 391151 . + . ID=gene388;Name=YPZ3_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01945 NC_014029.1 Protein Homology CDS 390873 391151 . + 0 ID=cds384;Parent=gene388;Dbxref=Genbank:WP_016260138.1;Name=WP_016260138.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260138.1;transl_table=11 NC_014029.1 RefSeq gene 391144 391416 . + . ID=gene389;Name=YPZ3_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01950 NC_014029.1 Protein Homology CDS 391144 391416 . + 0 ID=cds385;Parent=gene389;Dbxref=Genbank:WP_016260139.1;Name=WP_016260139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260139.1;transl_table=11 NC_014029.1 RefSeq gene 391532 392455 . + . ID=gene390;Name=YPZ3_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01955;old_locus_tag=YPZ3_0334 NC_014029.1 Protein Homology CDS 391532 392455 . + 0 ID=cds386;Parent=gene390;Dbxref=Genbank:WP_013060293.1;Name=WP_013060293.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060293.1;transl_table=11 NC_014029.1 RefSeq gene 392577 392849 . + . ID=gene391;Name=YPZ3_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01960 NC_014029.1 Protein Homology CDS 392577 392849 . + 0 ID=cds387;Parent=gene391;Dbxref=Genbank:WP_016260140.1;Name=WP_016260140.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260140.1;transl_table=11 NC_014029.1 RefSeq gene 392900 393319 . + . ID=gene392;Name=YPZ3_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01965;old_locus_tag=YPZ3_0335 NC_014029.1 Protein Homology CDS 392900 393319 . + 0 ID=cds388;Parent=gene392;Dbxref=Genbank:WP_016260141.1;Name=WP_016260141.1;gbkey=CDS;product=transposase;protein_id=WP_016260141.1;transl_table=11 NC_014029.1 RefSeq gene 393312 393662 . + . ID=gene393;Name=YPZ3_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01970;old_locus_tag=YPZ3_0336 NC_014029.1 Protein Homology CDS 393312 393662 . + 0 ID=cds389;Parent=gene393;Dbxref=Genbank:WP_013060295.1;Name=WP_013060295.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_013060295.1;transl_table=11 NC_014029.1 RefSeq gene 393693 395285 . + . ID=gene394;Name=YPZ3_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01975;old_locus_tag=YPZ3_0337 NC_014029.1 Protein Homology CDS 393693 395285 . + 0 ID=cds390;Parent=gene394;Dbxref=Genbank:WP_016587989.1;Name=WP_016587989.1;gbkey=CDS;product=transposase;protein_id=WP_016587989.1;transl_table=11 NC_014029.1 RefSeq gene 395332 395763 . + . ID=gene395;Name=YPZ3_RS01980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS01980;partial=true;pseudo=true;start_range=.,395332 NC_014029.1 Protein Homology CDS 395332 395763 . + 0 ID=cds391;Parent=gene395;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=integrase;pseudo=true;start_range=.,395332;transl_table=11 NC_014029.1 RefSeq gene 395912 396157 . + . ID=gene396;Name=YPZ3_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01985 NC_014029.1 Protein Homology CDS 395912 396157 . + 0 ID=cds392;Parent=gene396;Dbxref=Genbank:WP_016260143.1;Name=WP_016260143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016260143.1;transl_table=11 NC_014029.1 RefSeq gene 396478 397227 . + . ID=gene397;Name=YPZ3_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01990;old_locus_tag=YPZ3_0338 NC_014029.1 Protein Homology CDS 396478 397227 . + 0 ID=cds393;Parent=gene397;Dbxref=Genbank:WP_013060297.1;Name=WP_013060297.1;gbkey=CDS;product=MFS transporter;protein_id=WP_013060297.1;transl_table=11 NC_014029.1 RefSeq gene 397467 398144 . + . ID=gene398;Name=YPZ3_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS01995 NC_014029.1 Protein Homology CDS 397467 398144 . + 0 ID=cds394;Parent=gene398;Dbxref=Genbank:WP_016260176.1;Name=WP_016260176.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_016260176.1;transl_table=11 NC_014029.1 RefSeq gene 398542 399987 . + . ID=gene399;Name=YPZ3_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02000;old_locus_tag=YPZ3_0340 NC_014029.1 Protein Homology CDS 398542 399987 . + 0 ID=cds395;Parent=gene399;Dbxref=Genbank:WP_013060299.1;Name=WP_013060299.1;gbkey=CDS;product=DNA helicase;protein_id=WP_013060299.1;transl_table=11 NC_014029.1 RefSeq gene 399981 401690 . + . ID=gene400;Name=YPZ3_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02005;old_locus_tag=YPZ3_0341 NC_014029.1 Protein Homology CDS 399981 401690 . + 0 ID=cds396;Parent=gene400;Dbxref=Genbank:WP_013060300.1;Name=WP_013060300.1;gbkey=CDS;product=relaxase;protein_id=WP_013060300.1;transl_table=11 NC_014029.1 RefSeq gene 401758 402771 . + . ID=gene401;Name=YPZ3_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02010;old_locus_tag=YPZ3_0342 NC_014029.1 Protein Homology CDS 401758 402771 . + 0 ID=cds397;Parent=gene401;Dbxref=Genbank:WP_013060301.1;Name=WP_013060301.1;gbkey=CDS;product=tyrosine recombinase XerD;protein_id=WP_013060301.1;transl_table=11 NC_014029.1 RefSeq repeat_region 402964 403064 . + . ID=id18;gbkey=repeat_region NC_014029.1 RefSeq gene 402965 403041 . - . ID=gene402;Name=YPZ3_RS02015;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS02015;old_locus_tag=YPZ3_t2 NC_014029.1 tRNAscan-SE tRNA 402965 403041 . - . ID=rna4;Parent=gene402;anticodon=(pos:complement(403005..403007));gbkey=tRNA;product=tRNA-Phe NC_014029.1 tRNAscan-SE exon 402965 403041 . - . ID=id19;Parent=rna4;anticodon=(pos:complement(403005..403007));gbkey=tRNA;product=tRNA-Phe NC_014029.1 RefSeq gene 403186 403761 . - . ID=gene403;Name=YPZ3_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02020;old_locus_tag=YPZ3_0343 NC_014029.1 Protein Homology CDS 403186 403761 . - 0 ID=cds398;Parent=gene403;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NC_014029.1 RefSeq gene 404181 406196 . + . ID=gene404;Name=YPZ3_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02025;old_locus_tag=YPZ3_0344 NC_014029.1 Protein Homology CDS 404181 406196 . + 0 ID=cds399;Parent=gene404;Dbxref=Genbank:WP_002209118.1;Name=WP_002209118.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S-binding subunit;protein_id=WP_002209118.1;transl_table=11 NC_014029.1 RefSeq gene 406219 406776 . + . ID=gene405;Name=YPZ3_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02030;old_locus_tag=YPZ3_0345 NC_014029.1 Protein Homology CDS 406219 406776 . + 0 ID=cds400;Parent=gene405;Dbxref=Genbank:WP_002209119.1;Name=WP_002209119.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209119.1;transl_table=11 NC_014029.1 RefSeq gene 406799 408946 . + . ID=gene406;Name=YPZ3_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02035;old_locus_tag=YPZ3_0346 NC_014029.1 Protein Homology CDS 406799 408946 . + 0 ID=cds401;Parent=gene406;Dbxref=Genbank:WP_002209120.1;Name=WP_002209120.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_002209120.1;transl_table=11 NC_014029.1 RefSeq gene 409008 410795 . - . ID=gene407;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=YPZ3_RS02040;old_locus_tag=YPZ3_0347 NC_014029.1 Protein Homology CDS 409008 410795 . - 0 ID=cds402;Parent=gene407;Dbxref=Genbank:WP_002209121.1;Name=WP_002209121.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein DsbD;protein_id=WP_002209121.1;transl_table=11 NC_014029.1 RefSeq gene 410771 411094 . - . ID=gene408;Name=YPZ3_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02045;old_locus_tag=YPZ3_0348 NC_014029.1 Protein Homology CDS 410771 411094 . - 0 ID=cds403;Parent=gene408;Dbxref=Genbank:WP_002353622.1;Name=WP_002353622.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent ion tolerance protein CutA;protein_id=WP_002353622.1;transl_table=11 NC_014029.1 RefSeq gene 411315 412616 . - . ID=gene409;Name=YPZ3_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02050;old_locus_tag=YPZ3_0349 NC_014029.1 Protein Homology CDS 411315 412616 . - 0 ID=cds404;Parent=gene409;Dbxref=Genbank:WP_002209123.1;Name=WP_002209123.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002209123.1;transl_table=11 NC_014029.1 RefSeq gene 412736 414172 . - . ID=gene410;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02055;old_locus_tag=YPZ3_0350 NC_014029.1 Protein Homology CDS 412736 414172 . - 0 ID=cds405;Parent=gene410;Dbxref=Genbank:WP_002209124.1;Name=WP_002209124.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_002209124.1;transl_table=11 NC_014029.1 RefSeq gene 414620 415198 . + . ID=gene411;Name=YPZ3_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02060;old_locus_tag=YPZ3_0351 NC_014029.1 Protein Homology CDS 414620 415198 . + 0 ID=cds406;Parent=gene411;Dbxref=Genbank:WP_002209126.1;Name=WP_002209126.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_002209126.1;transl_table=11 NC_014029.1 RefSeq gene 415453 415746 . + . ID=gene412;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=YPZ3_RS02065 NC_014029.1 Protein Homology CDS 415453 415746 . + 0 ID=cds407;Parent=gene412;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NC_014029.1 RefSeq gene 415793 417439 . + . ID=gene413;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=YPZ3_RS02070;old_locus_tag=YPZ3_0352 NC_014029.1 Protein Homology CDS 415793 417439 . + 0 ID=cds408;Parent=gene413;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11 NC_014029.1 RefSeq gene 418063 418461 . + . ID=gene414;Name=YPZ3_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02075;old_locus_tag=YPZ3_0353 NC_014029.1 Protein Homology CDS 418063 418461 . + 0 ID=cds409;Parent=gene414;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11 NC_014029.1 RefSeq gene 418746 419774 . - . ID=gene415;Name=YPZ3_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02080;old_locus_tag=YPZ3_0354 NC_014029.1 Protein Homology CDS 418746 419774 . - 0 ID=cds410;Parent=gene415;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NC_014029.1 RefSeq gene 419810 420376 . + . ID=gene416;Name=YPZ3_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02085;old_locus_tag=YPZ3_0355 NC_014029.1 Protein Homology CDS 419810 420376 . + 0 ID=cds411;Parent=gene416;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NC_014029.1 RefSeq gene 420623 420937 . + . ID=gene417;Name=YPZ3_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02090 NC_014029.1 Protein Homology CDS 420623 420937 . + 0 ID=cds412;Parent=gene417;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11 NC_014029.1 RefSeq gene 421102 421458 . - . ID=gene418;Name=YPZ3_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02095;old_locus_tag=YPZ3_0357 NC_014029.1 Protein Homology CDS 421102 421458 . - 0 ID=cds413;Parent=gene418;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11 NC_014029.1 RefSeq gene 421475 421867 . - . ID=gene419;Name=YPZ3_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02100;old_locus_tag=YPZ3_0358 NC_014029.1 Protein Homology CDS 421475 421867 . - 0 ID=cds414;Parent=gene419;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11 NC_014029.1 RefSeq gene 421884 422618 . - . ID=gene420;Name=YPZ3_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02105;old_locus_tag=YPZ3_0359 NC_014029.1 Protein Homology CDS 421884 422618 . - 0 ID=cds415;Parent=gene420;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NC_014029.1 RefSeq gene 422611 424434 . - . ID=gene421;Name=YPZ3_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02110;old_locus_tag=YPZ3_0360 NC_014029.1 Protein Homology CDS 422611 424434 . - 0 ID=cds416;Parent=gene421;Dbxref=Genbank:WP_002209137.1;Name=WP_002209137.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11 NC_014029.1 RefSeq gene 424541 424732 . + . ID=gene422;Name=YPZ3_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02115 NC_014029.1 Protein Homology CDS 424541 424732 . + 0 ID=cds417;Parent=gene422;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11 NC_014029.1 RefSeq gene 424892 425869 . + . ID=gene423;Name=YPZ3_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02120;old_locus_tag=YPZ3_0361 NC_014029.1 Protein Homology CDS 424892 425869 . + 0 ID=cds418;Parent=gene423;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NC_014029.1 RefSeq gene 425990 429331 . - . ID=gene424;Name=YPZ3_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02125;old_locus_tag=YPZ3_0362 NC_014029.1 Protein Homology CDS 425990 429331 . - 0 ID=cds419;Parent=gene424;Dbxref=Genbank:WP_002209140.1;Name=WP_002209140.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_002209140.1;transl_table=11 NC_014029.1 RefSeq gene 429373 430254 . - . ID=gene425;Name=YPZ3_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02130;old_locus_tag=YPZ3_0363 NC_014029.1 Protein Homology CDS 429373 430254 . - 0 ID=cds420;Parent=gene425;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11 NC_014029.1 RefSeq gene 430579 431631 . - . ID=gene426;Name=YPZ3_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02135;old_locus_tag=YPZ3_0364 NC_014029.1 Protein Homology CDS 430579 431631 . - 0 ID=cds421;Parent=gene426;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NC_014029.1 RefSeq gene 431638 431832 . - . ID=gene427;Name=YPZ3_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02140 NC_014029.1 Protein Homology CDS 431638 431832 . - 0 ID=cds422;Parent=gene427;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11 NC_014029.1 RefSeq gene 431831 432376 . + . ID=gene428;Name=YPZ3_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02145;old_locus_tag=YPZ3_0365 NC_014029.1 Protein Homology CDS 431831 432376 . + 0 ID=cds423;Parent=gene428;Dbxref=Genbank:WP_002209143.1;Name=WP_002209143.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_002209143.1;transl_table=11 NC_014029.1 RefSeq repeat_region 432388 432730 . + . ID=id20;gbkey=repeat_region NC_014029.1 RefSeq gene 432934 433009 . + . ID=gene429;Name=YPZ3_RS02155;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS02155;old_locus_tag=YPZ3_t3 NC_014029.1 tRNAscan-SE tRNA 432934 433009 . + . ID=rna5;Parent=gene429;anticodon=(pos:432967..432969);gbkey=tRNA;product=tRNA-Gly NC_014029.1 tRNAscan-SE exon 432934 433009 . + . ID=id21;Parent=rna5;anticodon=(pos:432967..432969);gbkey=tRNA;product=tRNA-Gly NC_014029.1 RefSeq gene 433321 434556 . - . ID=gene430;Name=YPZ3_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02160;old_locus_tag=YPZ3_0366 NC_014029.1 Protein Homology CDS 433321 434556 . - 0 ID=cds424;Parent=gene430;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11 NC_014029.1 RefSeq gene 434555 436069 . + . ID=gene431;Name=YPZ3_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02165;old_locus_tag=YPZ3_0367 NC_014029.1 Protein Homology CDS 434555 436069 . + 0 ID=cds425;Parent=gene431;Dbxref=Genbank:WP_002209145.1;Name=WP_002209145.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002209145.1;transl_table=11 NC_014029.1 RefSeq gene 436080 436550 . + . ID=gene432;Name=YPZ3_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02170;old_locus_tag=YPZ3_0368 NC_014029.1 Protein Homology CDS 436080 436550 . + 0 ID=cds426;Parent=gene432;Dbxref=Genbank:WP_002209146.1;Name=WP_002209146.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_002209146.1;transl_table=11 NC_014029.1 RefSeq gene 436558 438471 . + . ID=gene433;Name=YPZ3_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02175;old_locus_tag=YPZ3_0369 NC_014029.1 Protein Homology CDS 436558 438471 . + 0 ID=cds427;Parent=gene433;Dbxref=Genbank:WP_002232017.1;Name=WP_002232017.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002232017.1;transl_table=11 NC_014029.1 RefSeq gene 438487 440394 . + . ID=gene434;Name=YPZ3_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02180;old_locus_tag=YPZ3_0370 NC_014029.1 Protein Homology CDS 438487 440394 . + 0 ID=cds428;Parent=gene434;Dbxref=Genbank:WP_002209148.1;Name=WP_002209148.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_002209148.1;transl_table=11 NC_014029.1 RefSeq gene 440387 441328 . + . ID=gene435;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02185;old_locus_tag=YPZ3_0371 NC_014029.1 Protein Homology CDS 440387 441328 . + 0 ID=cds429;Parent=gene435;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11 NC_014029.1 RefSeq gene 441444 441749 . + . ID=gene436;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YPZ3_RS02190;old_locus_tag=YPZ3_0372 NC_014029.1 Protein Homology CDS 441444 441749 . + 0 ID=cds430;Parent=gene436;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NC_014029.1 RefSeq gene 441848 443134 . + . ID=gene437;Name=YPZ3_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02195;old_locus_tag=YPZ3_0373 NC_014029.1 Protein Homology CDS 441848 443134 . + 0 ID=cds431;Parent=gene437;Dbxref=Genbank:WP_002209152.1;Name=WP_002209152.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_002209152.1;transl_table=11 NC_014029.1 RefSeq gene 443375 444634 . + . ID=gene438;Name=YPZ3_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02200;old_locus_tag=YPZ3_0374 NC_014029.1 Protein Homology CDS 443375 444634 . + 0 ID=cds432;Parent=gene438;Dbxref=Genbank:WP_002209154.1;Name=WP_002209154.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209154.1;transl_table=11 NC_014029.1 RefSeq gene 444638 445642 . + . ID=gene439;Name=YPZ3_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02205;old_locus_tag=YPZ3_0375 NC_014029.1 Protein Homology CDS 444638 445642 . + 0 ID=cds433;Parent=gene439;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11 NC_014029.1 RefSeq gene 445814 446014 . + . ID=gene440;Name=YPZ3_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02210 NC_014029.1 Protein Homology CDS 445814 446014 . + 0 ID=cds434;Parent=gene440;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11 NC_014029.1 RefSeq gene 446114 447412 . + . ID=gene441;Name=YPZ3_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02215;old_locus_tag=YPZ3_0376 NC_014029.1 Protein Homology CDS 446114 447412 . + 0 ID=cds435;Parent=gene441;Dbxref=Genbank:WP_002209157.1;Name=WP_002209157.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_002209157.1;transl_table=11 NC_014029.1 RefSeq gene 447781 448206 . + . ID=gene442;Name=YPZ3_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02220;old_locus_tag=YPZ3_0377 NC_014029.1 Protein Homology CDS 447781 448206 . + 0 ID=cds436;Parent=gene442;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11 NC_014029.1 RefSeq gene 448447 450981 . + . ID=gene443;Name=YPZ3_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02225;old_locus_tag=YPZ3_0378 NC_014029.1 Protein Homology CDS 448447 450981 . + 0 ID=cds437;Parent=gene443;Dbxref=Genbank:WP_002209159.1;Name=WP_002209159.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_002209159.1;transl_table=11 NC_014029.1 RefSeq gene 451100 451840 . + . ID=gene444;Name=YPZ3_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02230;old_locus_tag=YPZ3_0379 NC_014029.1 Protein Homology CDS 451100 451840 . + 0 ID=cds438;Parent=gene444;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NC_014029.1 RefSeq repeat_region 451916 452090 . + . ID=id22;gbkey=repeat_region NC_014029.1 RefSeq gene 452260 453891 . + . ID=gene445;Name=YPZ3_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02235;old_locus_tag=YPZ3_0380 NC_014029.1 Protein Homology CDS 452260 453891 . + 0 ID=cds439;Parent=gene445;Dbxref=Genbank:WP_002353634.1;Name=WP_002353634.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl CoA dehydrogenase;protein_id=WP_002353634.1;transl_table=11 NC_014029.1 RefSeq gene 453963 454274 . - . ID=gene446;Name=YPZ3_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02240;old_locus_tag=YPZ3_0381 NC_014029.1 Protein Homology CDS 453963 454274 . - 0 ID=cds440;Parent=gene446;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11 NC_014029.1 RefSeq gene 454465 454563 . + . ID=gene447;Name=YPZ3_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02245 NC_014029.1 Protein Homology CDS 454465 454563 . + 0 ID=cds441;Parent=gene447;Dbxref=Genbank:WP_002215296.1;Name=WP_002215296.1;gbkey=CDS;product=phospholipase;protein_id=WP_002215296.1;transl_table=11 NC_014029.1 RefSeq repeat_region 454544 456502 . + . ID=id23;gbkey=repeat_region NC_014029.1 RefSeq gene 454614 455393 . - . ID=gene448;Name=YPZ3_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02250;old_locus_tag=YPZ3_0382 NC_014029.1 Protein Homology CDS 454614 455393 . - 0 ID=cds442;Parent=gene448;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 455393 456415 . - . ID=gene449;Name=YPZ3_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02255;old_locus_tag=YPZ3_0383 NC_014029.1 Protein Homology CDS 455393 456415 . - 0 ID=cds443;Parent=gene449;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 456549 458612 . + . ID=gene450;Name=YPZ3_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02260;old_locus_tag=YPZ3_0384 NC_014029.1 Protein Homology CDS 456549 458612 . + 0 ID=cds444;Parent=gene450;Dbxref=Genbank:WP_002209166.1;Name=WP_002209166.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209166.1;transl_table=11 NC_014029.1 RefSeq gene 458609 459925 . + . ID=gene451;Name=YPZ3_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02265;old_locus_tag=YPZ3_0385 NC_014029.1 Protein Homology CDS 458609 459925 . + 0 ID=cds445;Parent=gene451;Dbxref=Genbank:WP_002209167.1;Name=WP_002209167.1;gbkey=CDS;product=mcrBC 5-methylcytosine restriction system component family protein;protein_id=WP_002209167.1;transl_table=11 NC_014029.1 RefSeq gene 459992 460222 . + . ID=gene452;Name=YPZ3_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02270 NC_014029.1 Protein Homology CDS 459992 460222 . + 0 ID=cds446;Parent=gene452;Dbxref=Genbank:WP_002215297.1;Name=WP_002215297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215297.1;transl_table=11 NC_014029.1 RefSeq repeat_region 460116 460328 . + . ID=id24;gbkey=repeat_region NC_014029.1 RefSeq gene 460547 460810 . - . ID=gene453;Name=YPZ3_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02275 NC_014029.1 Protein Homology CDS 460547 460810 . - 0 ID=cds447;Parent=gene453;Dbxref=Genbank:WP_002209168.1;Name=WP_002209168.1;gbkey=CDS;product=transposase;protein_id=WP_002209168.1;transl_table=11 NC_014029.1 RefSeq gene 460949 462274 . + . ID=gene454;Name=YPZ3_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02280;old_locus_tag=YPZ3_0386 NC_014029.1 Protein Homology CDS 460949 462274 . + 0 ID=cds448;Parent=gene454;Dbxref=Genbank:WP_002209169.1;Name=WP_002209169.1;gbkey=CDS;product=restriction endonuclease subunit M;protein_id=WP_002209169.1;transl_table=11 NC_014029.1 RefSeq gene 462324 463046 . + . ID=gene455;Name=YPZ3_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02285;old_locus_tag=YPZ3_0387 NC_014029.1 Protein Homology CDS 462324 463046 . + 0 ID=cds449;Parent=gene455;Dbxref=Genbank:WP_002209170.1;Name=WP_002209170.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209170.1;transl_table=11 NC_014029.1 RefSeq gene 463018 464391 . + . ID=gene456;Name=YPZ3_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02290;old_locus_tag=YPZ3_0388 NC_014029.1 Protein Homology CDS 463018 464391 . + 0 ID=cds450;Parent=gene456;Dbxref=Genbank:WP_002209171.1;Name=WP_002209171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209171.1;transl_table=11 NC_014029.1 RefSeq gene 464735 465022 . - . ID=gene457;Name=YPZ3_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02295 NC_014029.1 Protein Homology CDS 464735 465022 . - 0 ID=cds451;Parent=gene457;Dbxref=Genbank:WP_002215301.1;Name=WP_002215301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215301.1;transl_table=11 NC_014029.1 RefSeq gene 465224 465421 . - . ID=gene458;Name=YPZ3_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02300 NC_014029.1 Protein Homology CDS 465224 465421 . - 0 ID=cds452;Parent=gene458;Dbxref=Genbank:WP_002209172.1;Name=WP_002209172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209172.1;transl_table=11 NC_014029.1 RefSeq repeat_region 465360 465522 . + . ID=id25;gbkey=repeat_region NC_014029.1 RefSeq gene 465462 465557 . + . ID=gene459;Name=YPZ3_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02305 NC_014029.1 Protein Homology CDS 465462 465557 . + 0 ID=cds453;Parent=gene459;Dbxref=Genbank:WP_002215302.1;Name=WP_002215302.1;gbkey=CDS;product=transposase;protein_id=WP_002215302.1;transl_table=11 NC_014029.1 RefSeq repeat_region 465537 465699 . + . ID=id26;gbkey=repeat_region NC_014029.1 RefSeq gene 465663 467051 . + . ID=gene460;Name=YPZ3_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02310;old_locus_tag=YPZ3_0389 NC_014029.1 Protein Homology CDS 465663 467051 . + 0 ID=cds454;Parent=gene460;Dbxref=Genbank:WP_002209173.1;Name=WP_002209173.1;gbkey=CDS;product=ATPase involved in DNA repair;protein_id=WP_002209173.1;transl_table=11 NC_014029.1 RefSeq gene 467048 468202 . + . ID=gene461;Name=YPZ3_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02315;old_locus_tag=YPZ3_0390 NC_014029.1 Protein Homology CDS 467048 468202 . + 0 ID=cds455;Parent=gene461;Dbxref=Genbank:WP_002209174.1;Name=WP_002209174.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209174.1;transl_table=11 NC_014029.1 RefSeq gene 468214 468339 . - . ID=gene462;Name=YPZ3_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02320 NC_014029.1 Protein Homology CDS 468214 468339 . - 0 ID=cds456;Parent=gene462;Dbxref=Genbank:WP_002209175.1;Name=WP_002209175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209175.1;transl_table=11 NC_014029.1 RefSeq gene 468348 469394 . - . ID=gene463;Name=YPZ3_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02325;old_locus_tag=YPZ3_0391 NC_014029.1 Protein Homology CDS 468348 469394 . - 0 ID=cds457;Parent=gene463;Dbxref=Genbank:WP_002209176.1;Name=WP_002209176.1;gbkey=CDS;product=peptidase M48;protein_id=WP_002209176.1;transl_table=11 NC_014029.1 RefSeq gene 469405 470601 . - . ID=gene464;Name=YPZ3_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02330;old_locus_tag=YPZ3_0392 NC_014029.1 Protein Homology CDS 469405 470601 . - 0 ID=cds458;Parent=gene464;Dbxref=Genbank:WP_002209177.1;Name=WP_002209177.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209177.1;transl_table=11 NC_014029.1 RefSeq gene 471307 471843 . + . ID=gene465;Name=YPZ3_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02335;old_locus_tag=YPZ3_0393 NC_014029.1 Protein Homology CDS 471307 471843 . + 0 ID=cds459;Parent=gene465;Dbxref=Genbank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11 NC_014029.1 RefSeq gene 471845 472720 . + . ID=gene466;Name=YPZ3_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02340;old_locus_tag=YPZ3_0394 NC_014029.1 Protein Homology CDS 471845 472720 . + 0 ID=cds460;Parent=gene466;Dbxref=Genbank:WP_002209179.1;Name=WP_002209179.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209179.1;transl_table=11 NC_014029.1 RefSeq gene 472713 473057 . - . ID=gene467;Name=YPZ3_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02345;old_locus_tag=YPZ3_0395 NC_014029.1 Protein Homology CDS 472713 473057 . - 0 ID=cds461;Parent=gene467;Dbxref=Genbank:WP_002209180.1;Name=WP_002209180.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11 NC_014029.1 RefSeq gene 473150 473470 . - . ID=gene468;Name=YPZ3_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02350;old_locus_tag=YPZ3_0396 NC_014029.1 Protein Homology CDS 473150 473470 . - 0 ID=cds462;Parent=gene468;Dbxref=Genbank:WP_002209181.1;Name=WP_002209181.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NC_014029.1 RefSeq gene 473811 474893 . - . ID=gene469;Name=YPZ3_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02355;old_locus_tag=YPZ3_0397 NC_014029.1 Protein Homology CDS 473811 474893 . - 0 ID=cds463;Parent=gene469;Dbxref=Genbank:WP_002209182.1;Name=WP_002209182.1;gbkey=CDS;product=PTS fructose transporter subunit IIC;protein_id=WP_002209182.1;transl_table=11 NC_014029.1 RefSeq gene 475258 477816 . + . ID=gene470;Name=YPZ3_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02360;old_locus_tag=YPZ3_0398 NC_014029.1 Protein Homology CDS 475258 477816 . + 0 ID=cds464;Parent=gene470;Dbxref=Genbank:WP_002228120.1;Name=WP_002228120.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002228120.1;transl_table=11 NC_014029.1 RefSeq gene 477878 478369 . - . ID=gene471;Name=YPZ3_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02365;old_locus_tag=YPZ3_0399 NC_014029.1 Protein Homology CDS 477878 478369 . - 0 ID=cds465;Parent=gene471;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11 NC_014029.1 RefSeq gene 478670 478960 . - . ID=gene472;Name=YPZ3_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02370 NC_014029.1 Protein Homology CDS 478670 478960 . - 0 ID=cds466;Parent=gene472;Dbxref=Genbank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002209186.1;transl_table=11 NC_014029.1 RefSeq gene 479024 479899 . - . ID=gene473;Name=YPZ3_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02375;old_locus_tag=YPZ3_0400 NC_014029.1 Protein Homology CDS 479024 479899 . - 0 ID=cds467;Parent=gene473;Dbxref=Genbank:WP_002209188.1;Name=WP_002209188.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_002209188.1;transl_table=11 NC_014029.1 RefSeq gene 479955 480974 . - . ID=gene474;Name=YPZ3_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02380;old_locus_tag=YPZ3_0401 NC_014029.1 Protein Homology CDS 479955 480974 . - 0 ID=cds468;Parent=gene474;Dbxref=Genbank:WP_002209189.1;Name=WP_002209189.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_002209189.1;transl_table=11 NC_014029.1 RefSeq gene 481033 482034 . - . ID=gene475;Name=YPZ3_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02385;old_locus_tag=YPZ3_0402 NC_014029.1 Protein Homology CDS 481033 482034 . - 0 ID=cds469;Parent=gene475;Dbxref=Genbank:WP_002209190.1;Name=WP_002209190.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_002209190.1;transl_table=11 NC_014029.1 RefSeq gene 482031 483086 . - . ID=gene476;Name=YPZ3_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02390;old_locus_tag=YPZ3_0403 NC_014029.1 Protein Homology CDS 482031 483086 . - 0 ID=cds470;Parent=gene476;Dbxref=Genbank:WP_002209191.1;Name=WP_002209191.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_002209191.1;transl_table=11 NC_014029.1 RefSeq gene 483080 484663 . - . ID=gene477;Name=YPZ3_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02395;old_locus_tag=YPZ3_0404 NC_014029.1 Protein Homology CDS 483080 484663 . - 0 ID=cds471;Parent=gene477;Dbxref=Genbank:WP_002209192.1;Name=WP_002209192.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_002209192.1;transl_table=11 NC_014029.1 RefSeq gene 484773 484979 . - . ID=gene478;Name=YPZ3_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02400 NC_014029.1 Protein Homology CDS 484773 484979 . - 0 ID=cds472;Parent=gene478;Dbxref=Genbank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;product=membrane protein;protein_id=WP_002221620.1;transl_table=11 NC_014029.1 RefSeq gene 485008 485995 . + . ID=gene479;Name=YPZ3_RS02405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS02405;pseudo=true NC_014029.1 Protein Homology CDS 485008 485995 . + 0 ID=cds473;Parent=gene479;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator LsrR;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 486166 487758 . + . ID=gene480;Name=YPZ3_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02410;old_locus_tag=YPZ3_0407 NC_014029.1 Protein Homology CDS 486166 487758 . + 0 ID=cds474;Parent=gene480;Dbxref=Genbank:WP_002209194.1;Name=WP_002209194.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002209194.1;transl_table=11 NC_014029.1 RefSeq gene 488104 489267 . + . ID=gene481;Name=YPZ3_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02415;old_locus_tag=YPZ3_0408 NC_014029.1 Protein Homology CDS 488104 489267 . + 0 ID=cds475;Parent=gene481;Dbxref=Genbank:WP_002209196.1;Name=WP_002209196.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002209196.1;transl_table=11 NC_014029.1 RefSeq gene 489315 490547 . + . ID=gene482;Name=YPZ3_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02420;old_locus_tag=YPZ3_0409 NC_014029.1 Protein Homology CDS 489315 490547 . + 0 ID=cds476;Parent=gene482;Dbxref=Genbank:WP_002209197.1;Name=WP_002209197.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_002209197.1;transl_table=11 NC_014029.1 RefSeq repeat_region 490567 490735 . + . ID=id27;gbkey=repeat_region NC_014029.1 RefSeq gene 491133 491330 . + . ID=gene483;Name=YPZ3_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22145 NC_014029.1 Protein Homology CDS 491133 491330 . + 0 ID=cds477;Parent=gene483;Dbxref=Genbank:WP_002215224.1;Name=WP_002215224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215224.1;transl_table=11 NC_014029.1 RefSeq gene 491357 491590 . + . ID=gene484;Name=YPZ3_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02430 NC_014029.1 Protein Homology CDS 491357 491590 . + 0 ID=cds478;Parent=gene484;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11 NC_014029.1 RefSeq gene 491642 492724 . + . ID=gene485;Name=YPZ3_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02435;old_locus_tag=YPZ3_0410 NC_014029.1 Protein Homology CDS 491642 492724 . + 0 ID=cds479;Parent=gene485;Dbxref=Genbank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209199.1;transl_table=11 NC_014029.1 RefSeq gene 492724 495810 . + . ID=gene486;Name=YPZ3_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02440;old_locus_tag=YPZ3_0411 NC_014029.1 Protein Homology CDS 492724 495810 . + 0 ID=cds480;Parent=gene486;Dbxref=Genbank:WP_002209200.1;Name=WP_002209200.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_002209200.1;transl_table=11 NC_014029.1 RefSeq gene 495846 496037 . - . ID=gene487;Name=YPZ3_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02445 NC_014029.1 Protein Homology CDS 495846 496037 . - 0 ID=cds481;Parent=gene487;Dbxref=Genbank:WP_002215226.1;Name=WP_002215226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215226.1;transl_table=11 NC_014029.1 RefSeq gene 496171 496467 . - . ID=gene488;Name=YPZ3_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02450 NC_014029.1 Protein Homology CDS 496171 496467 . - 0 ID=cds482;Parent=gene488;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NC_014029.1 RefSeq gene 496650 496973 . - . ID=gene489;Name=YPZ3_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02455 NC_014029.1 Protein Homology CDS 496650 496973 . - 0 ID=cds483;Parent=gene489;Dbxref=Genbank:WP_002353658.1;Name=WP_002353658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002353658.1;transl_table=11 NC_014029.1 RefSeq gene 497306 498391 . + . ID=gene490;Name=YPZ3_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02460;old_locus_tag=YPZ3_0412 NC_014029.1 Protein Homology CDS 497306 498391 . + 0 ID=cds484;Parent=gene490;Dbxref=Genbank:WP_002209202.1;Name=WP_002209202.1;gbkey=CDS;product=pectinesterase;protein_id=WP_002209202.1;transl_table=11 NC_014029.1 RefSeq gene 498932 500104 . - . ID=gene491;Name=YPZ3_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02465;old_locus_tag=YPZ3_0413 NC_014029.1 Protein Homology CDS 498932 500104 . - 0 ID=cds485;Parent=gene491;Dbxref=Genbank:WP_002209204.1;Name=WP_002209204.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209204.1;transl_table=11 NC_014029.1 RefSeq gene 500353 500685 . + . ID=gene492;Name=YPZ3_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02470;old_locus_tag=YPZ3_0414 NC_014029.1 Protein Homology CDS 500353 500685 . + 0 ID=cds486;Parent=gene492;Dbxref=Genbank:WP_002215232.1;Name=WP_002215232.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215232.1;transl_table=11 NC_014029.1 RefSeq gene 500855 500941 . - . ID=gene493;Name=YPZ3_RS02475;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS02475;old_locus_tag=YPZ3_t4 NC_014029.1 tRNAscan-SE tRNA 500855 500941 . - . ID=rna6;Parent=gene493;anticodon=(pos:complement(500905..500907));gbkey=tRNA;product=tRNA-Leu NC_014029.1 tRNAscan-SE exon 500855 500941 . - . ID=id28;Parent=rna6;anticodon=(pos:complement(500905..500907));gbkey=tRNA;product=tRNA-Leu NC_014029.1 RefSeq gene 501198 502241 . - . ID=gene494;Name=YPZ3_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02480;old_locus_tag=YPZ3_0415 NC_014029.1 Protein Homology CDS 501198 502241 . - 0 ID=cds487;Parent=gene494;Dbxref=Genbank:WP_002209206.1;Name=WP_002209206.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase C;protein_id=WP_002209206.1;transl_table=11 NC_014029.1 RefSeq gene 502354 502791 . + . ID=gene495;Name=YPZ3_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02485;old_locus_tag=YPZ3_0416 NC_014029.1 Protein Homology CDS 502354 502791 . + 0 ID=cds488;Parent=gene495;Dbxref=Genbank:WP_002209207.1;Name=WP_002209207.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_002209207.1;transl_table=11 NC_014029.1 RefSeq gene 502736 503179 . + . ID=gene496;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YPZ3_RS02490 NC_014029.1 Protein Homology CDS 502736 503179 . + 0 ID=cds489;Parent=gene496;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NC_014029.1 RefSeq gene 503358 504947 . + . ID=gene497;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YPZ3_RS02495;old_locus_tag=YPZ3_0418 NC_014029.1 Protein Homology CDS 503358 504947 . + 0 ID=cds490;Parent=gene497;Dbxref=Genbank:WP_002209209.1;Name=WP_002209209.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_002209209.1;transl_table=11 NC_014029.1 RefSeq gene 505274 505888 . + . ID=gene498;Name=YPZ3_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02500;old_locus_tag=YPZ3_0419 NC_014029.1 Protein Homology CDS 505274 505888 . + 0 ID=cds491;Parent=gene498;Dbxref=Genbank:WP_002209210.1;Name=WP_002209210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209210.1;transl_table=11 NC_014029.1 RefSeq gene 506055 506216 . + . ID=gene499;Name=YPZ3_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02505 NC_014029.1 Protein Homology CDS 506055 506216 . + 0 ID=cds492;Parent=gene499;Dbxref=Genbank:WP_002209211.1;Name=WP_002209211.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209211.1;transl_table=11 NC_014029.1 RefSeq gene 506293 507561 . + . ID=gene500;Name=YPZ3_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02510;old_locus_tag=YPZ3_0420 NC_014029.1 Protein Homology CDS 506293 507561 . + 0 ID=cds493;Parent=gene500;Dbxref=Genbank:WP_002209212.1;Name=WP_002209212.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002209212.1;transl_table=11 NC_014029.1 RefSeq gene 507598 508386 . + . ID=gene501;Name=YPZ3_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02515;old_locus_tag=YPZ3_0421 NC_014029.1 Protein Homology CDS 507598 508386 . + 0 ID=cds494;Parent=gene501;Dbxref=Genbank:WP_002228116.1;Name=WP_002228116.1;gbkey=CDS;product=DNAse;protein_id=WP_002228116.1;transl_table=11 NC_014029.1 RefSeq repeat_region 508578 508749 . + . ID=id29;gbkey=repeat_region NC_014029.1 RefSeq gene 508915 510192 . + . ID=gene502;Name=YPZ3_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02520;old_locus_tag=YPZ3_0422 NC_014029.1 Protein Homology CDS 508915 510192 . + 0 ID=cds495;Parent=gene502;Dbxref=Genbank:WP_032465614.1;Name=WP_032465614.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_032465614.1;transl_table=11 NC_014029.1 RefSeq gene 510768 511565 . + . ID=gene503;Name=YPZ3_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02525;old_locus_tag=YPZ3_0423 NC_014029.1 Protein Homology CDS 510768 511565 . + 0 ID=cds496;Parent=gene503;Dbxref=Genbank:WP_002216078.1;Name=WP_002216078.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase 2;protein_id=WP_002216078.1;transl_table=11 NC_014029.1 RefSeq gene 511686 512228 . + . ID=gene504;Name=YPZ3_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02530;old_locus_tag=YPZ3_0424 NC_014029.1 Protein Homology CDS 511686 512228 . + 0 ID=cds497;Parent=gene504;Dbxref=Genbank:WP_002353659.1;Name=WP_002353659.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002353659.1;transl_table=11 NC_014029.1 RefSeq gene 512225 513004 . + . ID=gene505;Name=YPZ3_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02535;old_locus_tag=YPZ3_0425 NC_014029.1 Protein Homology CDS 512225 513004 . + 0 ID=cds498;Parent=gene505;Dbxref=Genbank:WP_002231521.1;Name=WP_002231521.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002231521.1;transl_table=11 NC_014029.1 RefSeq gene 513136 514359 . + . ID=gene506;Name=YPZ3_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02540;old_locus_tag=YPZ3_0426 NC_014029.1 Protein Homology CDS 513136 514359 . + 0 ID=cds499;Parent=gene506;Dbxref=Genbank:WP_002209216.1;Name=WP_002209216.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_002209216.1;transl_table=11 NC_014029.1 RefSeq gene 514484 515203 . + . ID=gene507;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YPZ3_RS02545;old_locus_tag=YPZ3_0427 NC_014029.1 Protein Homology CDS 514484 515203 . + 0 ID=cds500;Parent=gene507;Dbxref=Genbank:WP_002209217.1;Name=WP_002209217.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_002209217.1;transl_table=11 NC_014029.1 RefSeq gene 515315 516016 . - . ID=gene508;Name=YPZ3_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02550;old_locus_tag=YPZ3_0428 NC_014029.1 Protein Homology CDS 515315 516016 . - 0 ID=cds501;Parent=gene508;Dbxref=Genbank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;product=protein Smp;protein_id=WP_002209218.1;transl_table=11 NC_014029.1 RefSeq gene 516248 517228 . + . ID=gene509;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YPZ3_RS02555;old_locus_tag=YPZ3_0429 NC_014029.1 Protein Homology CDS 516248 517228 . + 0 ID=cds502;Parent=gene509;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NC_014029.1 RefSeq gene 517316 518698 . + . ID=gene510;Name=YPZ3_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02560;old_locus_tag=YPZ3_0430 NC_014029.1 Protein Homology CDS 517316 518698 . + 0 ID=cds503;Parent=gene510;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NC_014029.1 RefSeq gene 518857 520128 . + . ID=gene511;Name=YPZ3_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02565;old_locus_tag=YPZ3_0431 NC_014029.1 Protein Homology CDS 518857 520128 . + 0 ID=cds504;Parent=gene511;Dbxref=Genbank:WP_002209221.1;Name=WP_002209221.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_002209221.1;transl_table=11 NC_014029.1 RefSeq gene 520285 521415 . + . ID=gene512;Name=YPZ3_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02570;old_locus_tag=YPZ3_0432 NC_014029.1 Protein Homology CDS 520285 521415 . + 0 ID=cds505;Parent=gene512;Dbxref=Genbank:WP_002218755.1;Name=WP_002218755.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_002218755.1;transl_table=11 NC_014029.1 RefSeq gene 521561 523203 . - . ID=gene513;Name=YPZ3_RS02575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS02575;pseudo=true NC_014029.1 Protein Homology CDS 521561 523203 . - 0 ID=cds506;Parent=gene513;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 523407 523913 . - . ID=gene514;Name=YPZ3_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02580;old_locus_tag=YPZ3_0435 NC_014029.1 Protein Homology CDS 523407 523913 . - 0 ID=cds507;Parent=gene514;Dbxref=Genbank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215967.1;transl_table=11 NC_014029.1 RefSeq gene 523919 525220 . - . ID=gene515;Name=YPZ3_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02585;old_locus_tag=YPZ3_0436 NC_014029.1 Protein Homology CDS 523919 525220 . - 0 ID=cds508;Parent=gene515;Dbxref=Genbank:WP_002209224.1;Name=WP_002209224.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209224.1;transl_table=11 NC_014029.1 RefSeq gene 525217 525840 . - . ID=gene516;Name=YPZ3_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02590;old_locus_tag=YPZ3_0437 NC_014029.1 Protein Homology CDS 525217 525840 . - 0 ID=cds509;Parent=gene516;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11 NC_014029.1 RefSeq gene 526215 528941 . - . ID=gene517;Name=YPZ3_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02595;old_locus_tag=YPZ3_0438 NC_014029.1 Protein Homology CDS 526215 528941 . - 0 ID=cds510;Parent=gene517;Dbxref=Genbank:WP_002209226.1;Name=WP_002209226.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_002209226.1;transl_table=11 NC_014029.1 RefSeq gene 529511 531430 . + . ID=gene518;Name=YPZ3_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02600;old_locus_tag=YPZ3_0439 NC_014029.1 Protein Homology CDS 529511 531430 . + 0 ID=cds511;Parent=gene518;Dbxref=Genbank:WP_002209227.1;Name=WP_002209227.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002209227.1;transl_table=11 NC_014029.1 RefSeq gene 531666 532058 . + . ID=gene519;Name=YPZ3_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02605;old_locus_tag=YPZ3_0440 NC_014029.1 Protein Homology CDS 531666 532058 . + 0 ID=cds512;Parent=gene519;Dbxref=Genbank:WP_002209228.1;Name=WP_002209228.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NC_014029.1 RefSeq gene 532055 532597 . - . ID=gene520;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YPZ3_RS02610;old_locus_tag=YPZ3_0441 NC_014029.1 Protein Homology CDS 532055 532597 . - 0 ID=cds513;Parent=gene520;Dbxref=Genbank:WP_002209229.1;Name=WP_002209229.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_002209229.1;transl_table=11 NC_014029.1 RefSeq gene 532691 533338 . + . ID=gene521;Name=YPZ3_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02615;old_locus_tag=YPZ3_0442 NC_014029.1 Protein Homology CDS 532691 533338 . + 0 ID=cds514;Parent=gene521;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NC_014029.1 RefSeq gene 533335 534201 . - . ID=gene522;Name=YPZ3_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02620;old_locus_tag=YPZ3_0443 NC_014029.1 Protein Homology CDS 533335 534201 . - 0 ID=cds515;Parent=gene522;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11 NC_014029.1 RefSeq gene 534427 534894 . + . ID=gene523;Name=YPZ3_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02625;old_locus_tag=YPZ3_0444 NC_014029.1 Protein Homology CDS 534427 534894 . + 0 ID=cds516;Parent=gene523;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11 NC_014029.1 RefSeq gene 535068 535784 . - . ID=gene524;Name=YPZ3_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02630;old_locus_tag=YPZ3_0445 NC_014029.1 Protein Homology CDS 535068 535784 . - 0 ID=cds517;Parent=gene524;Dbxref=Genbank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209234.1;transl_table=11 NC_014029.1 RefSeq gene 536888 539347 . + . ID=gene525;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02635;old_locus_tag=YPZ3_0446 NC_014029.1 Protein Homology CDS 536888 539347 . + 0 ID=cds518;Parent=gene525;Dbxref=Genbank:WP_002209237.1;Name=WP_002209237.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=WP_002209237.1;transl_table=11 NC_014029.1 RefSeq gene 539350 540279 . + . ID=gene526;Name=YPZ3_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02640;old_locus_tag=YPZ3_0447 NC_014029.1 Protein Homology CDS 539350 540279 . + 0 ID=cds519;Parent=gene526;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NC_014029.1 RefSeq gene 540283 541572 . + . ID=gene527;Name=YPZ3_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02645;old_locus_tag=YPZ3_0448 NC_014029.1 Protein Homology CDS 540283 541572 . + 0 ID=cds520;Parent=gene527;Dbxref=Genbank:WP_002209239.1;Name=WP_002209239.1;gbkey=CDS;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NC_014029.1 RefSeq gene 542389 543165 . - . ID=gene528;Name=YPZ3_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02650;old_locus_tag=YPZ3_0449 NC_014029.1 Protein Homology CDS 542389 543165 . - 0 ID=cds521;Parent=gene528;Dbxref=Genbank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209240.1;transl_table=11 NC_014029.1 RefSeq gene 543697 544650 . + . ID=gene529;Name=YPZ3_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02655;old_locus_tag=YPZ3_0450 NC_014029.1 Protein Homology CDS 543697 544650 . + 0 ID=cds522;Parent=gene529;Dbxref=Genbank:WP_002209241.1;Name=WP_002209241.1;gbkey=CDS;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NC_014029.1 RefSeq gene 544938 545525 . + . ID=gene530;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02660;old_locus_tag=YPZ3_0451 NC_014029.1 Protein Homology CDS 544938 545525 . + 0 ID=cds523;Parent=gene530;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11 NC_014029.1 RefSeq gene 545653 547041 . + . ID=gene531;Name=YPZ3_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02665;old_locus_tag=YPZ3_0452 NC_014029.1 Protein Homology CDS 545653 547041 . + 0 ID=cds524;Parent=gene531;Dbxref=Genbank:WP_002209244.1;Name=WP_002209244.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209244.1;transl_table=11 NC_014029.1 RefSeq gene 547111 549558 . - . ID=gene532;Name=YPZ3_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02670;old_locus_tag=YPZ3_0453 NC_014029.1 Protein Homology CDS 547111 549558 . - 0 ID=cds525;Parent=gene532;Dbxref=Genbank:WP_002209245.1;Name=WP_002209245.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_002209245.1;transl_table=11 NC_014029.1 RefSeq gene 549847 550458 . - . ID=gene533;Name=YPZ3_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02675;old_locus_tag=YPZ3_0454 NC_014029.1 Protein Homology CDS 549847 550458 . - 0 ID=cds526;Parent=gene533;Dbxref=Genbank:WP_002209246.1;Name=WP_002209246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209246.1;transl_table=11 NC_014029.1 RefSeq gene 550832 552742 . + . ID=gene534;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YPZ3_RS02680;old_locus_tag=YPZ3_0455 NC_014029.1 Protein Homology CDS 550832 552742 . + 0 ID=cds527;Parent=gene534;Dbxref=Genbank:WP_002209248.1;Name=WP_002209248.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11 NC_014029.1 RefSeq gene 552854 553993 . + . ID=gene535;Name=YPZ3_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02685;old_locus_tag=YPZ3_0456 NC_014029.1 Protein Homology CDS 552854 553993 . + 0 ID=cds528;Parent=gene535;Dbxref=Genbank:WP_002209249.1;Name=WP_002209249.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NC_014029.1 RefSeq gene 554236 555420 . + . ID=gene536;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02690;old_locus_tag=YPZ3_0457 NC_014029.1 Protein Homology CDS 554236 555420 . + 0 ID=cds529;Parent=gene536;Dbxref=Genbank:WP_002220711.1;Name=WP_002220711.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_002220711.1;transl_table=11 NC_014029.1 RefSeq gene 555550 556449 . + . ID=gene537;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YPZ3_RS02695;old_locus_tag=YPZ3_0458 NC_014029.1 Protein Homology CDS 555550 556449 . + 0 ID=cds530;Parent=gene537;Dbxref=Genbank:WP_002220713.1;Name=WP_002220713.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_002220713.1;transl_table=11 NC_014029.1 RefSeq gene 556580 556843 . - . ID=gene538;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YPZ3_RS02700 NC_014029.1 Protein Homology CDS 556580 556843 . - 0 ID=cds531;Parent=gene538;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NC_014029.1 RefSeq gene 556865 557041 . - . ID=gene539;Name=YPZ3_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02705 NC_014029.1 Protein Homology CDS 556865 557041 . - 0 ID=cds532;Parent=gene539;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11 NC_014029.1 RefSeq gene 557258 558197 . + . ID=gene540;Name=YPZ3_RS02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS02710;pseudo=true NC_014029.1 Protein Homology CDS 557258 558197 . + 0 ID=cds533;Parent=gene540;exception=annotated by transcript or proteomic data;gbkey=CDS;product=FMN adenylyltransferase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 558229 561045 . + . ID=gene541;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YPZ3_RS02715;old_locus_tag=YPZ3_0461 NC_014029.1 Protein Homology CDS 558229 561045 . + 0 ID=cds534;Parent=gene541;Dbxref=Genbank:WP_002210509.1;Name=WP_002210509.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_002210509.1;transl_table=11 NC_014029.1 RefSeq gene 561045 561554 . + . ID=gene542;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02720;old_locus_tag=YPZ3_0462 NC_014029.1 Protein Homology CDS 561045 561554 . + 0 ID=cds535;Parent=gene542;Dbxref=Genbank:WP_002210508.1;Name=WP_002210508.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_002210508.1;transl_table=11 NC_014029.1 RefSeq gene 561622 562080 . + . ID=gene543;Name=YPZ3_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02725;old_locus_tag=YPZ3_0463 NC_014029.1 Protein Homology CDS 561622 562080 . + 0 ID=cds536;Parent=gene543;Dbxref=Genbank:WP_002228112.1;Name=WP_002228112.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NC_014029.1 RefSeq gene 562061 563014 . + . ID=gene544;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YPZ3_RS02730;old_locus_tag=YPZ3_0464 NC_014029.1 Protein Homology CDS 562061 563014 . + 0 ID=cds537;Parent=gene544;Dbxref=Genbank:WP_002210506.1;Name=WP_002210506.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002210506.1;transl_table=11 NC_014029.1 RefSeq gene 563082 563207 . + . ID=gene545;Name=YPZ3_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02735 NC_014029.1 Protein Homology CDS 563082 563207 . + 0 ID=cds538;Parent=gene545;Dbxref=Genbank:WP_002210505.1;Name=WP_002210505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210505.1;transl_table=11 NC_014029.1 RefSeq repeat_region 563090 563227 . + . ID=id30;gbkey=repeat_region NC_014029.1 RefSeq gene 563236 563406 . + . ID=gene546;Name=YPZ3_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02740 NC_014029.1 Protein Homology CDS 563236 563406 . + 0 ID=cds539;Parent=gene546;Dbxref=Genbank:WP_002216778.1;Name=WP_002216778.1;gbkey=CDS;product=invasin;protein_id=WP_002216778.1;transl_table=11 NC_014029.1 RefSeq repeat_region 563243 563965 . + . ID=id31;gbkey=repeat_region NC_014029.1 RefSeq gene 563396 563854 . + . ID=gene547;Name=YPZ3_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02745;old_locus_tag=YPZ3_0465 NC_014029.1 Protein Homology CDS 563396 563854 . + 0 ID=cds540;Parent=gene547;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 564307 565128 . + . ID=gene548;Name=YPZ3_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02750;old_locus_tag=YPZ3_0466 NC_014029.1 Protein Homology CDS 564307 565128 . + 0 ID=cds541;Parent=gene548;Dbxref=Genbank:WP_002210504.1;Name=WP_002210504.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11 NC_014029.1 RefSeq gene 565601 566776 . + . ID=gene549;Name=YPZ3_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02755;old_locus_tag=YPZ3_0467 NC_014029.1 Protein Homology CDS 565601 566776 . + 0 ID=cds542;Parent=gene549;Dbxref=Genbank:WP_002224759.1;Name=WP_002224759.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_002224759.1;transl_table=11 NC_014029.1 RefSeq gene 566792 570025 . + . ID=gene550;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YPZ3_RS02760;old_locus_tag=YPZ3_0468 NC_014029.1 Protein Homology CDS 566792 570025 . + 0 ID=cds543;Parent=gene550;Dbxref=Genbank:WP_002210502.1;Name=WP_002210502.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large chain;protein_id=WP_002210502.1;transl_table=11 NC_014029.1 RefSeq gene 570253 570867 . - . ID=gene551;Name=YPZ3_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02765;old_locus_tag=YPZ3_0469 NC_014029.1 Protein Homology CDS 570253 570867 . - 0 ID=cds544;Parent=gene551;Dbxref=Genbank:WP_002210501.1;Name=WP_002210501.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_002210501.1;transl_table=11 NC_014029.1 RefSeq gene 571191 571991 . + . ID=gene552;Name=YPZ3_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02770;old_locus_tag=YPZ3_0470 NC_014029.1 Protein Homology CDS 571191 571991 . + 0 ID=cds545;Parent=gene552;Dbxref=Genbank:WP_002210499.1;Name=WP_002210499.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210499.1;transl_table=11 NC_014029.1 RefSeq gene 571988 572443 . + . ID=gene553;Name=YPZ3_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02775;old_locus_tag=YPZ3_0471 NC_014029.1 Protein Homology CDS 571988 572443 . + 0 ID=cds546;Parent=gene553;Dbxref=Genbank:WP_002210498.1;Name=WP_002210498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210498.1;transl_table=11 NC_014029.1 RefSeq gene 572593 573075 . + . ID=gene554;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02780;old_locus_tag=YPZ3_0472 NC_014029.1 Protein Homology CDS 572593 573075 . + 0 ID=cds547;Parent=gene554;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NC_014029.1 RefSeq repeat_region 573137 573857 . + . ID=id32;gbkey=repeat_region NC_014029.1 RefSeq gene 573287 573745 . + . ID=gene555;Name=YPZ3_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02785;old_locus_tag=YPZ3_0473 NC_014029.1 Protein Homology CDS 573287 573745 . + 0 ID=cds548;Parent=gene555;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 574280 574501 . + . ID=gene556;Name=YPZ3_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02790 NC_014029.1 Protein Homology CDS 574280 574501 . + 0 ID=cds549;Parent=gene556;Dbxref=Genbank:WP_002210494.1;Name=WP_002210494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210494.1;transl_table=11 NC_014029.1 RefSeq gene 574628 575092 . + . ID=gene557;Name=YPZ3_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02795;old_locus_tag=YPZ3_0474 NC_014029.1 Protein Homology CDS 574628 575092 . + 0 ID=cds550;Parent=gene557;Dbxref=Genbank:WP_002210493.1;Name=WP_002210493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210493.1;transl_table=11 NC_014029.1 RefSeq gene 575182 576051 . - . ID=gene558;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YPZ3_RS02800;old_locus_tag=YPZ3_0475 NC_014029.1 Protein Homology CDS 575182 576051 . - 0 ID=cds551;Parent=gene558;Dbxref=Genbank:WP_002210492.1;Name=WP_002210492.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_002210492.1;transl_table=11 NC_014029.1 RefSeq gene 576068 576445 . - . ID=gene559;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=YPZ3_RS02805;old_locus_tag=YPZ3_0476 NC_014029.1 Protein Homology CDS 576068 576445 . - 0 ID=cds552;Parent=gene559;Dbxref=Genbank:WP_002210491.1;Name=WP_002210491.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_002210491.1;transl_table=11 NC_014029.1 RefSeq gene 576459 577277 . - . ID=gene560;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02810;old_locus_tag=YPZ3_0477 NC_014029.1 Protein Homology CDS 576459 577277 . - 0 ID=cds553;Parent=gene560;Dbxref=Genbank:WP_002210490.1;Name=WP_002210490.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_002210490.1;transl_table=11 NC_014029.1 RefSeq gene 577270 578265 . - . ID=gene561;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02815;old_locus_tag=YPZ3_0478 NC_014029.1 Protein Homology CDS 577270 578265 . - 0 ID=cds554;Parent=gene561;Dbxref=Genbank:WP_002210489.1;Name=WP_002210489.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_002210489.1;transl_table=11 NC_014029.1 RefSeq gene 578249 579553 . - . ID=gene562;Name=YPZ3_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02820;old_locus_tag=YPZ3_0479 NC_014029.1 Protein Homology CDS 578249 579553 . - 0 ID=cds555;Parent=gene562;Dbxref=Genbank:WP_002210488.1;Name=WP_002210488.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_002210488.1;transl_table=11 NC_014029.1 RefSeq gene 579621 581963 . - . ID=gene563;Name=YPZ3_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02825;old_locus_tag=YPZ3_0480 NC_014029.1 Protein Homology CDS 579621 581963 . - 0 ID=cds556;Parent=gene563;Dbxref=Genbank:WP_002228111.1;Name=WP_002228111.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_002228111.1;transl_table=11 NC_014029.1 RefSeq gene 582148 582981 . + . ID=gene564;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02830;old_locus_tag=YPZ3_0481 NC_014029.1 Protein Homology CDS 582148 582981 . + 0 ID=cds557;Parent=gene564;Dbxref=Genbank:WP_002210486.1;Name=WP_002210486.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_002210486.1;transl_table=11 NC_014029.1 RefSeq gene 583279 583899 . - . ID=gene565;Name=YPZ3_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02835;old_locus_tag=YPZ3_0482 NC_014029.1 Protein Homology CDS 583279 583899 . - 0 ID=cds558;Parent=gene565;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11 NC_014029.1 RefSeq gene 585122 585865 . - . ID=gene566;Name=YPZ3_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02840;old_locus_tag=YPZ3_0483 NC_014029.1 Protein Homology CDS 585122 585865 . - 0 ID=cds559;Parent=gene566;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11 NC_014029.1 RefSeq gene 586195 587208 . + . ID=gene567;Name=YPZ3_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02845;old_locus_tag=YPZ3_0484 NC_014029.1 Protein Homology CDS 586195 587208 . + 0 ID=cds560;Parent=gene567;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11 NC_014029.1 RefSeq gene 587219 587779 . + . ID=gene568;Name=YPZ3_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02850;old_locus_tag=YPZ3_0485 NC_014029.1 Protein Homology CDS 587219 587779 . + 0 ID=cds561;Parent=gene568;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11 NC_014029.1 RefSeq gene 587788 589290 . + . ID=gene569;Name=YPZ3_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02855;old_locus_tag=YPZ3_0486 NC_014029.1 Protein Homology CDS 587788 589290 . + 0 ID=cds562;Parent=gene569;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11 NC_014029.1 RefSeq gene 589453 589971 . + . ID=gene570;Name=YPZ3_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02860;old_locus_tag=YPZ3_0487 NC_014029.1 Protein Homology CDS 589453 589971 . + 0 ID=cds563;Parent=gene570;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11 NC_014029.1 RefSeq gene 590045 590488 . + . ID=gene571;Name=YPZ3_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02865;old_locus_tag=YPZ3_0488 NC_014029.1 Protein Homology CDS 590045 590488 . + 0 ID=cds564;Parent=gene571;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11 NC_014029.1 RefSeq gene 590521 592365 . + . ID=gene572;Name=YPZ3_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02870;old_locus_tag=YPZ3_0489 NC_014029.1 Protein Homology CDS 590521 592365 . + 0 ID=cds565;Parent=gene572;Dbxref=Genbank:WP_002210477.1;Name=WP_002210477.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_002210477.1;transl_table=11 NC_014029.1 RefSeq gene 592358 593341 . + . ID=gene573;Name=YPZ3_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02875;old_locus_tag=YPZ3_0490 NC_014029.1 Protein Homology CDS 592358 593341 . + 0 ID=cds566;Parent=gene573;Dbxref=Genbank:WP_002210476.1;Name=WP_002210476.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210476.1;transl_table=11 NC_014029.1 RefSeq gene 593359 595947 . + . ID=gene574;Name=YPZ3_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02880;old_locus_tag=YPZ3_0491 NC_014029.1 Protein Homology CDS 593359 595947 . + 0 ID=cds567;Parent=gene574;Dbxref=Genbank:WP_002210475.1;Name=WP_002210475.1;gbkey=CDS;product=peptidase;protein_id=WP_002210475.1;transl_table=11 NC_014029.1 RefSeq gene 596051 598399 . + . ID=gene575;Name=YPZ3_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02885;old_locus_tag=YPZ3_0492 NC_014029.1 Protein Homology CDS 596051 598399 . + 0 ID=cds568;Parent=gene575;Dbxref=Genbank:WP_002210474.1;Name=WP_002210474.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210474.1;transl_table=11 NC_014029.1 RefSeq gene 598412 598984 . + . ID=gene576;Name=YPZ3_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02890;old_locus_tag=YPZ3_0493 NC_014029.1 Protein Homology CDS 598412 598984 . + 0 ID=cds569;Parent=gene576;Dbxref=Genbank:WP_002228110.1;Name=WP_002228110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228110.1;transl_table=11 NC_014029.1 RefSeq gene 599009 600631 . + . ID=gene577;Name=YPZ3_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02895;old_locus_tag=YPZ3_0494 NC_014029.1 Protein Homology CDS 599009 600631 . + 0 ID=cds570;Parent=gene577;Dbxref=Genbank:WP_002228109.1;Name=WP_002228109.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228109.1;transl_table=11 NC_014029.1 RefSeq gene 600657 601760 . + . ID=gene578;Name=YPZ3_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02900;old_locus_tag=YPZ3_0495 NC_014029.1 Protein Homology CDS 600657 601760 . + 0 ID=cds571;Parent=gene578;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11 NC_014029.1 RefSeq gene 601753 602370 . + . ID=gene579;Name=YPZ3_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02905;old_locus_tag=YPZ3_0496 NC_014029.1 Protein Homology CDS 601753 602370 . + 0 ID=cds572;Parent=gene579;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11 NC_014029.1 RefSeq gene 602376 602741 . + . ID=gene580;Name=YPZ3_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02910 NC_014029.1 Protein Homology CDS 602376 602741 . + 0 ID=cds573;Parent=gene580;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11 NC_014029.1 RefSeq gene 602734 603225 . + . ID=gene581;Name=YPZ3_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02915;old_locus_tag=YPZ3_0497 NC_014029.1 Protein Homology CDS 602734 603225 . + 0 ID=cds574;Parent=gene581;Dbxref=Genbank:WP_002210471.1;Name=WP_002210471.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210471.1;transl_table=11 NC_014029.1 RefSeq gene 603345 604700 . + . ID=gene582;Name=YPZ3_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02920;old_locus_tag=YPZ3_0498 NC_014029.1 Protein Homology CDS 603345 604700 . + 0 ID=cds575;Parent=gene582;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11 NC_014029.1 RefSeq gene 604697 606307 . + . ID=gene583;Name=YPZ3_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02925;old_locus_tag=YPZ3_0499 NC_014029.1 Protein Homology CDS 604697 606307 . + 0 ID=cds576;Parent=gene583;Dbxref=Genbank:WP_002210469.1;Name=WP_002210469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210469.1;transl_table=11 NC_014029.1 RefSeq gene 606369 609809 . + . ID=gene584;Name=YPZ3_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02930;old_locus_tag=YPZ3_0500 NC_014029.1 Protein Homology CDS 606369 609809 . + 0 ID=cds577;Parent=gene584;Dbxref=Genbank:WP_002214734.1;Name=WP_002214734.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214734.1;transl_table=11 NC_014029.1 RefSeq gene 609831 610184 . + . ID=gene585;Name=YPZ3_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02935;old_locus_tag=YPZ3_0501 NC_014029.1 Protein Homology CDS 609831 610184 . + 0 ID=cds578;Parent=gene585;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11 NC_014029.1 RefSeq repeat_region 610227 610397 . + . ID=id33;gbkey=repeat_region NC_014029.1 RefSeq gene 610440 613346 . - . ID=gene586;Name=YPZ3_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02940;old_locus_tag=YPZ3_0502 NC_014029.1 Protein Homology CDS 610440 613346 . - 0 ID=cds579;Parent=gene586;Dbxref=Genbank:WP_002220588.1;Name=WP_002220588.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_002220588.1;transl_table=11 NC_014029.1 RefSeq gene 613807 616176 . - . ID=gene587;Name=YPZ3_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02945;old_locus_tag=YPZ3_0503 NC_014029.1 Protein Homology CDS 613807 616176 . - 0 ID=cds580;Parent=gene587;Dbxref=Genbank:WP_002210466.1;Name=WP_002210466.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11 NC_014029.1 RefSeq gene 616372 617139 . + . ID=gene588;Name=YPZ3_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02950;old_locus_tag=YPZ3_0504 NC_014029.1 Protein Homology CDS 616372 617139 . + 0 ID=cds581;Parent=gene588;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11 NC_014029.1 RefSeq gene 617208 617918 . - . ID=gene589;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS02955;old_locus_tag=YPZ3_0505 NC_014029.1 Protein Homology CDS 617208 617918 . - 0 ID=cds582;Parent=gene589;Dbxref=Genbank:WP_002210464.1;Name=WP_002210464.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_002210464.1;transl_table=11 NC_014029.1 RefSeq gene 617905 619512 . - . ID=gene590;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YPZ3_RS02960;old_locus_tag=YPZ3_0506 NC_014029.1 Protein Homology CDS 617905 619512 . - 0 ID=cds583;Parent=gene590;Dbxref=Genbank:WP_002214276.1;Name=WP_002214276.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_002214276.1;transl_table=11 NC_014029.1 RefSeq gene 619488 620534 . - . ID=gene591;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=YPZ3_RS02965;old_locus_tag=YPZ3_0507 NC_014029.1 Protein Homology CDS 619488 620534 . - 0 ID=cds584;Parent=gene591;Dbxref=Genbank:WP_002210462.1;Name=WP_002210462.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_002210462.1;transl_table=11 NC_014029.1 RefSeq gene 621035 621319 . + . ID=gene592;Name=YPZ3_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02970 NC_014029.1 Protein Homology CDS 621035 621319 . + 0 ID=cds585;Parent=gene592;Dbxref=Genbank:WP_002214269.1;Name=WP_002214269.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214269.1;transl_table=11 NC_014029.1 RefSeq gene 621420 623081 . - . ID=gene593;Name=YPZ3_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02975;old_locus_tag=YPZ3_0508 NC_014029.1 Protein Homology CDS 621420 623081 . - 0 ID=cds586;Parent=gene593;Dbxref=Genbank:WP_002210461.1;Name=WP_002210461.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210461.1;transl_table=11 NC_014029.1 RefSeq gene 623319 623492 . + . ID=gene594;Name=YPZ3_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02980 NC_014029.1 Protein Homology CDS 623319 623492 . + 0 ID=cds587;Parent=gene594;Dbxref=Genbank:WP_002214268.1;Name=WP_002214268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214268.1;transl_table=11 NC_014029.1 RefSeq gene 623745 624677 . + . ID=gene595;Name=YPZ3_RS02985;end_range=624677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS02985;old_locus_tag=YPZ3_0509;partial=true;pseudo=true NC_014029.1 Protein Homology CDS 623745 624677 . + 0 ID=cds588;Parent=gene595;end_range=624677,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=sugar transporter;pseudo=true;transl_table=11 NC_014029.1 RefSeq repeat_region 624677 626635 . + . ID=id34;gbkey=repeat_region NC_014029.1 RefSeq gene 624745 625524 . - . ID=gene596;Name=YPZ3_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02990;old_locus_tag=YPZ3_0510 NC_014029.1 Protein Homology CDS 624745 625524 . - 0 ID=cds589;Parent=gene596;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 625524 626546 . - . ID=gene597;Name=YPZ3_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS02995;old_locus_tag=YPZ3_0511 NC_014029.1 Protein Homology CDS 625524 626546 . - 0 ID=cds590;Parent=gene597;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 626634 626885 . + . ID=gene598;Name=YPZ3_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03000 NC_014029.1 Protein Homology CDS 626634 626885 . + 0 ID=cds591;Parent=gene598;Dbxref=Genbank:WP_002397472.1;Name=WP_002397472.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002397472.1;transl_table=11 NC_014029.1 RefSeq gene 627126 627728 . - . ID=gene599;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YPZ3_RS03005;old_locus_tag=YPZ3_0512 NC_014029.1 Protein Homology CDS 627126 627728 . - 0 ID=cds592;Parent=gene599;Dbxref=Genbank:WP_002210456.1;Name=WP_002210456.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NC_014029.1 RefSeq gene 627743 629173 . - . ID=gene600;Name=YPZ3_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03010;old_locus_tag=YPZ3_0513 NC_014029.1 Protein Homology CDS 627743 629173 . - 0 ID=cds593;Parent=gene600;Dbxref=Genbank:WP_002210455.1;Name=WP_002210455.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11 NC_014029.1 RefSeq gene 629175 630266 . - . ID=gene601;Name=YPZ3_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03015;old_locus_tag=YPZ3_0514 NC_014029.1 Protein Homology CDS 629175 630266 . - 0 ID=cds594;Parent=gene601;Dbxref=Genbank:WP_002210454.1;Name=WP_002210454.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_002210454.1;transl_table=11 NC_014029.1 RefSeq gene 630269 631831 . - . ID=gene602;Name=YPZ3_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03020;old_locus_tag=YPZ3_0515 NC_014029.1 Protein Homology CDS 630269 631831 . - 0 ID=cds595;Parent=gene602;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NC_014029.1 RefSeq repeat_region 631865 632590 . + . ID=id35;gbkey=repeat_region NC_014029.1 RefSeq gene 631978 632436 . - . ID=gene603;Name=YPZ3_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03025;old_locus_tag=YPZ3_0516 NC_014029.1 Protein Homology CDS 631978 632436 . - 0 ID=cds596;Parent=gene603;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 632426 632596 . - . ID=gene604;Name=YPZ3_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03030 NC_014029.1 Protein Homology CDS 632426 632596 . - 0 ID=cds597;Parent=gene604;Dbxref=Genbank:WP_002216432.1;Name=WP_002216432.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216432.1;transl_table=11 NC_014029.1 RefSeq gene 633758 634714 . + . ID=gene605;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YPZ3_RS03035;old_locus_tag=YPZ3_0517 NC_014029.1 Protein Homology CDS 633758 634714 . + 0 ID=cds598;Parent=gene605;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11 NC_014029.1 RefSeq gene 635048 635254 . + . ID=gene606;Name=YPZ3_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03040 NC_014029.1 Protein Homology CDS 635048 635254 . + 0 ID=cds599;Parent=gene606;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11 NC_014029.1 RefSeq gene 635251 637056 . + . ID=gene607;Name=YPZ3_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03045;old_locus_tag=YPZ3_0518 NC_014029.1 Protein Homology CDS 635251 637056 . + 0 ID=cds600;Parent=gene607;Dbxref=Genbank:WP_002216437.1;Name=WP_002216437.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002216437.1;transl_table=11 NC_014029.1 RefSeq gene 637087 637197 . + . ID=gene608;Name=YPZ3_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03050 NC_014029.1 Protein Homology CDS 637087 637197 . + 0 ID=cds601;Parent=gene608;Dbxref=Genbank:WP_002228104.1;Name=WP_002228104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228104.1;transl_table=11 NC_014029.1 RefSeq gene 637516 639243 . + . ID=gene609;Name=YPZ3_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03055;old_locus_tag=YPZ3_0519 NC_014029.1 Protein Homology CDS 637516 639243 . + 0 ID=cds602;Parent=gene609;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11 NC_014029.1 RefSeq gene 639246 639740 . + . ID=gene610;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YPZ3_RS03060;old_locus_tag=YPZ3_0520 NC_014029.1 Protein Homology CDS 639246 639740 . + 0 ID=cds603;Parent=gene610;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11 NC_014029.1 RefSeq repeat_region 639788 640508 . + . ID=id36;gbkey=repeat_region NC_014029.1 RefSeq gene 639939 640397 . + . ID=gene611;Name=YPZ3_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03065;old_locus_tag=YPZ3_0521 NC_014029.1 Protein Homology CDS 639939 640397 . + 0 ID=cds604;Parent=gene611;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 640719 640835 . - . ID=gene612;Name=YPZ3_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03070 NC_014029.1 Protein Homology CDS 640719 640835 . - 0 ID=cds605;Parent=gene612;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11 NC_014029.1 RefSeq gene 640902 641912 . + . ID=gene613;Name=YPZ3_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03075;old_locus_tag=YPZ3_0522 NC_014029.1 Protein Homology CDS 640902 641912 . + 0 ID=cds606;Parent=gene613;Dbxref=Genbank:WP_002210447.1;Name=WP_002210447.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210447.1;transl_table=11 NC_014029.1 RefSeq gene 642043 642483 . - . ID=gene614;Name=YPZ3_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03080;old_locus_tag=YPZ3_0523 NC_014029.1 Protein Homology CDS 642043 642483 . - 0 ID=cds607;Parent=gene614;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11 NC_014029.1 RefSeq repeat_region 642844 643016 . + . ID=id37;gbkey=repeat_region NC_014029.1 RefSeq gene 643605 644063 . + . ID=gene615;Name=YPZ3_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03085;old_locus_tag=YPZ3_0524 NC_014029.1 Protein Homology CDS 643605 644063 . + 0 ID=cds608;Parent=gene615;Dbxref=Genbank:WP_002210443.1;Name=WP_002210443.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_002210443.1;transl_table=11 NC_014029.1 RefSeq gene 644066 645028 . + . ID=gene616;Name=YPZ3_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03090;old_locus_tag=YPZ3_0525 NC_014029.1 Protein Homology CDS 644066 645028 . + 0 ID=cds609;Parent=gene616;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11 NC_014029.1 RefSeq gene 645025 645342 . + . ID=gene617;Name=YPZ3_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03095;old_locus_tag=YPZ3_0526 NC_014029.1 Protein Homology CDS 645025 645342 . + 0 ID=cds610;Parent=gene617;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NC_014029.1 RefSeq gene 645408 647171 . + . ID=gene618;Name=YPZ3_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03100;old_locus_tag=YPZ3_0527 NC_014029.1 Protein Homology CDS 645408 647171 . + 0 ID=cds611;Parent=gene618;Dbxref=Genbank:WP_002210440.1;Name=WP_002210440.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=penicillin-binding protein 3;protein_id=WP_002210440.1;transl_table=11 NC_014029.1 RefSeq gene 647158 648645 . + . ID=gene619;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YPZ3_RS03105;old_locus_tag=YPZ3_0528 NC_014029.1 Protein Homology CDS 647158 648645 . + 0 ID=cds612;Parent=gene619;Dbxref=Genbank:WP_002210439.1;Name=WP_002210439.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_002210439.1;transl_table=11 NC_014029.1 RefSeq gene 648642 650018 . + . ID=gene620;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YPZ3_RS03110;old_locus_tag=YPZ3_0529 NC_014029.1 Protein Homology CDS 648642 650018 . + 0 ID=cds613;Parent=gene620;Dbxref=Genbank:WP_002210438.1;Name=WP_002210438.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_002210438.1;transl_table=11 NC_014029.1 RefSeq gene 650012 651094 . + . ID=gene621;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YPZ3_RS03115;old_locus_tag=YPZ3_0530 NC_014029.1 Protein Homology CDS 650012 651094 . + 0 ID=cds614;Parent=gene621;Dbxref=Genbank:WP_002210437.1;Name=WP_002210437.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_002210437.1;transl_table=11 NC_014029.1 RefSeq gene 651097 652413 . + . ID=gene622;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YPZ3_RS03120;old_locus_tag=YPZ3_0531 NC_014029.1 Protein Homology CDS 651097 652413 . + 0 ID=cds615;Parent=gene622;Dbxref=Genbank:WP_002210436.1;Name=WP_002210436.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_002210436.1;transl_table=11 NC_014029.1 RefSeq gene 652413 653615 . + . ID=gene623;Name=YPZ3_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03125;old_locus_tag=YPZ3_0532 NC_014029.1 Protein Homology CDS 652413 653615 . + 0 ID=cds616;Parent=gene623;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NC_014029.1 RefSeq gene 653612 654682 . + . ID=gene624;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YPZ3_RS03130;old_locus_tag=YPZ3_0533 NC_014029.1 Protein Homology CDS 653612 654682 . + 0 ID=cds617;Parent=gene624;Dbxref=Genbank:WP_002210434.1;Name=WP_002210434.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_002210434.1;transl_table=11 NC_014029.1 RefSeq gene 654820 656295 . + . ID=gene625;Name=YPZ3_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03135;old_locus_tag=YPZ3_0534 NC_014029.1 Protein Homology CDS 654820 656295 . + 0 ID=cds618;Parent=gene625;Dbxref=Genbank:WP_002216457.1;Name=WP_002216457.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11 NC_014029.1 RefSeq gene 656288 657208 . + . ID=gene626;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=YPZ3_RS03140;old_locus_tag=YPZ3_0535 NC_014029.1 Protein Homology CDS 656288 657208 . + 0 ID=cds619;Parent=gene626;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NC_014029.1 RefSeq gene 657210 658037 . + . ID=gene627;Name=YPZ3_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03145;old_locus_tag=YPZ3_0536 NC_014029.1 Protein Homology CDS 657210 658037 . + 0 ID=cds620;Parent=gene627;Dbxref=Genbank:WP_002228100.1;Name=WP_002228100.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_002228100.1;transl_table=11 NC_014029.1 RefSeq gene 658064 659320 . + . ID=gene628;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YPZ3_RS03150;old_locus_tag=YPZ3_0537 NC_014029.1 Protein Homology CDS 658064 659320 . + 0 ID=cds621;Parent=gene628;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NC_014029.1 RefSeq gene 659393 660544 . + . ID=gene629;Name=YPZ3_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03155;old_locus_tag=YPZ3_0538 NC_014029.1 Protein Homology CDS 659393 660544 . + 0 ID=cds622;Parent=gene629;Dbxref=Genbank:WP_002210430.1;Name=WP_002210430.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NC_014029.1 RefSeq gene 660644 661564 . + . ID=gene630;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YPZ3_RS03160;old_locus_tag=YPZ3_0539 NC_014029.1 Protein Homology CDS 660644 661564 . + 0 ID=cds623;Parent=gene630;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NC_014029.1 RefSeq gene 661731 662255 . - . ID=gene631;Name=YPZ3_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03165;old_locus_tag=YPZ3_0540 NC_014029.1 Protein Homology CDS 661731 662255 . - 0 ID=cds624;Parent=gene631;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11 NC_014029.1 RefSeq gene 662284 662817 . + . ID=gene632;Name=YPZ3_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03170;old_locus_tag=YPZ3_0541 NC_014029.1 Protein Homology CDS 662284 662817 . + 0 ID=cds625;Parent=gene632;Dbxref=Genbank:WP_002210427.1;Name=WP_002210427.1;gbkey=CDS;product=secretion monitor;protein_id=WP_002210427.1;transl_table=11 NC_014029.1 RefSeq gene 662895 665609 . + . ID=gene633;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=YPZ3_RS03175;old_locus_tag=YPZ3_0542 NC_014029.1 Protein Homology CDS 662895 665609 . + 0 ID=cds626;Parent=gene633;Dbxref=Genbank:WP_002210426.1;Name=WP_002210426.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NC_014029.1 RefSeq repeat_region 665652 665827 . + . ID=id38;gbkey=repeat_region NC_014029.1 RefSeq gene 665904 666290 . + . ID=gene634;Name=YPZ3_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03180;old_locus_tag=YPZ3_0543 NC_014029.1 Protein Homology CDS 665904 666290 . + 0 ID=cds627;Parent=gene634;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11 NC_014029.1 RefSeq repeat_region 666356 668441 . + . ID=id39;gbkey=repeat_region NC_014029.1 RefSeq gene 666552 667331 . - . ID=gene635;Name=YPZ3_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03185;old_locus_tag=YPZ3_0544 NC_014029.1 Protein Homology CDS 666552 667331 . - 0 ID=cds628;Parent=gene635;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 667331 668353 . - . ID=gene636;Name=YPZ3_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03190;old_locus_tag=YPZ3_0545 NC_014029.1 Protein Homology CDS 667331 668353 . - 0 ID=cds629;Parent=gene636;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 668367 668546 . - . ID=gene637;Name=YPZ3_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03195 NC_014029.1 Protein Homology CDS 668367 668546 . - 0 ID=cds630;Parent=gene637;Dbxref=Genbank:WP_002210422.1;Name=WP_002210422.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002210422.1;transl_table=11 NC_014029.1 RefSeq gene 668632 669027 . - . ID=gene638;Name=YPZ3_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03200;old_locus_tag=YPZ3_0546 NC_014029.1 Protein Homology CDS 668632 669027 . - 0 ID=cds631;Parent=gene638;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11 NC_014029.1 RefSeq gene 669331 669615 . - . ID=gene639;Name=YPZ3_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03205 NC_014029.1 Protein Homology CDS 669331 669615 . - 0 ID=cds632;Parent=gene639;Dbxref=Genbank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002210420.1;transl_table=11 NC_014029.1 RefSeq gene 669612 670007 . - . ID=gene640;Name=YPZ3_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03210;old_locus_tag=YPZ3_0547 NC_014029.1 Protein Homology CDS 669612 670007 . - 0 ID=cds633;Parent=gene640;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11 NC_014029.1 RefSeq gene 670010 670315 . - . ID=gene641;Name=YPZ3_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03215;old_locus_tag=YPZ3_0548 NC_014029.1 Protein Homology CDS 670010 670315 . - 0 ID=cds634;Parent=gene641;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11 NC_014029.1 RefSeq gene 670320 670466 . - . ID=gene642;Name=YPZ3_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03220 NC_014029.1 Protein Homology CDS 670320 670466 . - 0 ID=cds635;Parent=gene642;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11 NC_014029.1 RefSeq gene 670470 670850 . - . ID=gene643;Name=YPZ3_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03225;old_locus_tag=YPZ3_0549 NC_014029.1 Protein Homology CDS 670470 670850 . - 0 ID=cds636;Parent=gene643;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11 NC_014029.1 RefSeq gene 671076 671465 . - . ID=gene644;Name=YPZ3_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03230;old_locus_tag=YPZ3_0550 NC_014029.1 Protein Homology CDS 671076 671465 . - 0 ID=cds637;Parent=gene644;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11 NC_014029.1 RefSeq gene 671462 672160 . - . ID=gene645;Name=YPZ3_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03235;old_locus_tag=YPZ3_0551 NC_014029.1 Protein Homology CDS 671462 672160 . - 0 ID=cds638;Parent=gene645;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11 NC_014029.1 RefSeq gene 672438 672971 . - . ID=gene646;Name=YPZ3_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03240;old_locus_tag=YPZ3_0552 NC_014029.1 Protein Homology CDS 672438 672971 . - 0 ID=cds639;Parent=gene646;Dbxref=Genbank:WP_002218957.1;Name=WP_002218957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218957.1;transl_table=11 NC_014029.1 RefSeq gene 673220 674014 . - . ID=gene647;Name=YPZ3_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03245;old_locus_tag=YPZ3_0553 NC_014029.1 Protein Homology CDS 673220 674014 . - 0 ID=cds640;Parent=gene647;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11 NC_014029.1 RefSeq gene 674277 675578 . - . ID=gene648;Name=YPZ3_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03250;old_locus_tag=YPZ3_0554 NC_014029.1 Protein Homology CDS 674277 675578 . - 0 ID=cds641;Parent=gene648;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11 NC_014029.1 RefSeq gene 675628 675795 . + . ID=gene649;Name=YPZ3_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03255 NC_014029.1 Protein Homology CDS 675628 675795 . + 0 ID=cds642;Parent=gene649;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11 NC_014029.1 RefSeq gene 676326 677735 . + . ID=gene650;Name=YPZ3_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03260;old_locus_tag=YPZ3_0555 NC_014029.1 Protein Homology CDS 676326 677735 . + 0 ID=cds643;Parent=gene650;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11 NC_014029.1 RefSeq gene 677934 679385 . + . ID=gene651;Name=YPZ3_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03265;old_locus_tag=YPZ3_0556 NC_014029.1 Protein Homology CDS 677934 679385 . + 0 ID=cds644;Parent=gene651;Dbxref=Genbank:WP_002210409.1;Name=WP_002210409.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_002210409.1;transl_table=11 NC_014029.1 RefSeq gene 679396 680886 . + . ID=gene652;Name=YPZ3_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03270;old_locus_tag=YPZ3_0557 NC_014029.1 Protein Homology CDS 679396 680886 . + 0 ID=cds645;Parent=gene652;Dbxref=Genbank:WP_002210408.1;Name=WP_002210408.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_002210408.1;transl_table=11 NC_014029.1 RefSeq gene 681039 681569 . + . ID=gene653;Name=YPZ3_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03275;old_locus_tag=YPZ3_0558 NC_014029.1 Protein Homology CDS 681039 681569 . + 0 ID=cds646;Parent=gene653;Dbxref=Genbank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210407.1;transl_table=11 NC_014029.1 RefSeq repeat_region 681576 682299 . + . ID=id40;gbkey=repeat_region NC_014029.1 RefSeq gene 681687 682145 . - . ID=gene654;Name=YPZ3_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03280;old_locus_tag=YPZ3_0559 NC_014029.1 Protein Homology CDS 681687 682145 . - 0 ID=cds647;Parent=gene654;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 682346 683602 . - . ID=gene655;Name=YPZ3_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03285;old_locus_tag=YPZ3_0560 NC_014029.1 Protein Homology CDS 682346 683602 . - 0 ID=cds648;Parent=gene655;Dbxref=Genbank:WP_002216063.1;Name=WP_002216063.1;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=WP_002216063.1;transl_table=11 NC_014029.1 RefSeq gene 684137 685132 . - . ID=gene656;Name=YPZ3_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03290;old_locus_tag=YPZ3_0561 NC_014029.1 Protein Homology CDS 684137 685132 . - 0 ID=cds649;Parent=gene656;Dbxref=Genbank:WP_002210405.1;Name=WP_002210405.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210405.1;transl_table=11 NC_014029.1 RefSeq gene 685335 685844 . - . ID=gene657;Name=YPZ3_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03295;old_locus_tag=YPZ3_0562 NC_014029.1 Protein Homology CDS 685335 685844 . - 0 ID=cds650;Parent=gene657;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11 NC_014029.1 RefSeq gene 686083 688896 . - . ID=gene658;Name=YPZ3_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03300;old_locus_tag=YPZ3_0563 NC_014029.1 Protein Homology CDS 686083 688896 . - 0 ID=cds651;Parent=gene658;Dbxref=Genbank:WP_002353701.1;Name=WP_002353701.1;gbkey=CDS;product=autotransporter;protein_id=WP_002353701.1;transl_table=11 NC_014029.1 RefSeq repeat_region 687215 687555 . + . ID=id41;gbkey=repeat_region NC_014029.1 RefSeq gene 689536 690723 . + . ID=gene659;Name=YPZ3_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03305;old_locus_tag=YPZ3_0564 NC_014029.1 Protein Homology CDS 689536 690723 . + 0 ID=cds652;Parent=gene659;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11 NC_014029.1 RefSeq gene 690839 692860 . - . ID=gene660;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=YPZ3_RS03310;old_locus_tag=YPZ3_0565 NC_014029.1 Protein Homology CDS 690839 692860 . - 0 ID=cds653;Parent=gene660;Dbxref=Genbank:WP_002210401.1;Name=WP_002210401.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_002210401.1;transl_table=11 NC_014029.1 RefSeq gene 693073 693642 . - . ID=gene661;Name=YPZ3_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03315;old_locus_tag=YPZ3_0566 NC_014029.1 Protein Homology CDS 693073 693642 . - 0 ID=cds654;Parent=gene661;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11 NC_014029.1 RefSeq gene 693738 693971 . + . ID=gene662;Name=YPZ3_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03320 NC_014029.1 Protein Homology CDS 693738 693971 . + 0 ID=cds655;Parent=gene662;Dbxref=Genbank:WP_002214938.1;Name=WP_002214938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214938.1;transl_table=11 NC_014029.1 RefSeq gene 694033 695532 . - . ID=gene663;Name=YPZ3_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03325;old_locus_tag=YPZ3_0567 NC_014029.1 Protein Homology CDS 694033 695532 . - 0 ID=cds656;Parent=gene663;Dbxref=Genbank:WP_002210399.1;Name=WP_002210399.1;gbkey=CDS;product=kinase;protein_id=WP_002210399.1;transl_table=11 NC_014029.1 RefSeq gene 695564 697297 . - . ID=gene664;Name=YPZ3_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03330;old_locus_tag=YPZ3_0568 NC_014029.1 Protein Homology CDS 695564 697297 . - 0 ID=cds657;Parent=gene664;Dbxref=Genbank:WP_002210398.1;Name=WP_002210398.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210398.1;transl_table=11 NC_014029.1 RefSeq gene 697353 698336 . - . ID=gene665;Name=YPZ3_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03335;old_locus_tag=YPZ3_0569 NC_014029.1 Protein Homology CDS 697353 698336 . - 0 ID=cds658;Parent=gene665;Dbxref=Genbank:WP_002228095.1;Name=WP_002228095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228095.1;transl_table=11 NC_014029.1 RefSeq gene 698438 699076 . - . ID=gene666;Name=YPZ3_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03340;old_locus_tag=YPZ3_0570 NC_014029.1 Protein Homology CDS 698438 699076 . - 0 ID=cds659;Parent=gene666;Dbxref=Genbank:WP_002228094.1;Name=WP_002228094.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002228094.1;transl_table=11 NC_014029.1 RefSeq gene 699078 699719 . - . ID=gene667;Name=YPZ3_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03345;old_locus_tag=YPZ3_0571 NC_014029.1 Protein Homology CDS 699078 699719 . - 0 ID=cds660;Parent=gene667;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11 NC_014029.1 RefSeq gene 699752 700390 . - . ID=gene668;Name=YPZ3_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03350;old_locus_tag=YPZ3_0572 NC_014029.1 Protein Homology CDS 699752 700390 . - 0 ID=cds661;Parent=gene668;Dbxref=Genbank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002210395.1;transl_table=11 NC_014029.1 RefSeq gene 701105 702793 . + . ID=gene669;Name=YPZ3_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03355;old_locus_tag=YPZ3_0573 NC_014029.1 Protein Homology CDS 701105 702793 . + 0 ID=cds662;Parent=gene669;Dbxref=Genbank:WP_002210394.1;Name=WP_002210394.1;gbkey=CDS;product=outer membrane transporter CdiB;protein_id=WP_002210394.1;transl_table=11 NC_014029.1 RefSeq gene 702838 712725 . + . ID=gene670;Name=YPZ3_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03360;old_locus_tag=YPZ3_0574 NC_014029.1 Protein Homology CDS 702838 712725 . + 0 ID=cds663;Parent=gene670;Dbxref=Genbank:WP_002214945.1;Name=WP_002214945.1;gbkey=CDS;product=toxin CdiA;protein_id=WP_002214945.1;transl_table=11 NC_014029.1 RefSeq repeat_region 707940 708687 . + . ID=id42;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 709315 709458 . + . ID=id43;gbkey=repeat_region NC_014029.1 RefSeq gene 712722 712955 . + . ID=gene671;Name=YPZ3_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03365 NC_014029.1 Protein Homology CDS 712722 712955 . + 0 ID=cds664;Parent=gene671;Dbxref=Genbank:WP_002214946.1;Name=WP_002214946.1;gbkey=CDS;product=immunity protein CdiI;protein_id=WP_002214946.1;transl_table=11 NC_014029.1 RefSeq gene 713017 713166 . + . ID=gene672;Name=YPZ3_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03370 NC_014029.1 Protein Homology CDS 713017 713166 . + 0 ID=cds665;Parent=gene672;Dbxref=Genbank:WP_002214947.1;Name=WP_002214947.1;gbkey=CDS;product=adhesin;protein_id=WP_002214947.1;transl_table=11 NC_014029.1 RefSeq gene 713221 713448 . + . ID=gene673;Name=YPZ3_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03375 NC_014029.1 Protein Homology CDS 713221 713448 . + 0 ID=cds666;Parent=gene673;Dbxref=Genbank:WP_002214949.1;Name=WP_002214949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214949.1;transl_table=11 NC_014029.1 RefSeq gene 713529 713960 . + . ID=gene674;Name=YPZ3_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03380 NC_014029.1 Protein Homology CDS 713529 713960 . + 0 ID=cds667;Parent=gene674;Dbxref=Genbank:WP_002228093.1;Name=WP_002228093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228093.1;transl_table=11 NC_014029.1 RefSeq gene 713993 714748 . + . ID=gene675;Name=YPZ3_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03385;old_locus_tag=YPZ3_0575 NC_014029.1 Protein Homology CDS 713993 714748 . + 0 ID=cds668;Parent=gene675;Dbxref=Genbank:WP_002214952.1;Name=WP_002214952.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002214952.1;transl_table=11 NC_014029.1 RefSeq repeat_region 713998 714745 . + . ID=id44;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 714782 714925 . + . ID=id45;gbkey=repeat_region NC_014029.1 RefSeq gene 714812 714976 . + . ID=gene676;Name=YPZ3_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03390 NC_014029.1 Protein Homology CDS 714812 714976 . + 0 ID=cds669;Parent=gene676;Dbxref=Genbank:WP_002228290.1;Name=WP_002228290.1;gbkey=CDS;product=adhesin;protein_id=WP_002228290.1;transl_table=11 NC_014029.1 RefSeq gene 715244 717529 . - . ID=gene677;Name=YPZ3_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03395;old_locus_tag=YPZ3_0576 NC_014029.1 Protein Homology CDS 715244 717529 . - 0 ID=cds670;Parent=gene677;Dbxref=Genbank:WP_002210389.1;Name=WP_002210389.1;gbkey=CDS;product=autotransporter;protein_id=WP_002210389.1;transl_table=11 NC_014029.1 RefSeq gene 717589 718585 . - . ID=gene678;Name=YPZ3_RS03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS03400;pseudo=true NC_014029.1 Protein Homology CDS 717589 718585 . - 0 ID=cds671;Parent=gene678;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 718687 720066 . - . ID=gene679;Name=YPZ3_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03405;old_locus_tag=YPZ3_0579 NC_014029.1 Protein Homology CDS 718687 720066 . - 0 ID=cds672;Parent=gene679;Dbxref=Genbank:WP_002210387.1;Name=WP_002210387.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210387.1;transl_table=11 NC_014029.1 RefSeq gene 720392 721507 . + . ID=gene680;Name=YPZ3_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03410;old_locus_tag=YPZ3_0580 NC_014029.1 Protein Homology CDS 720392 721507 . + 0 ID=cds673;Parent=gene680;Dbxref=Genbank:WP_002353714.1;Name=WP_002353714.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002353714.1;transl_table=11 NC_014029.1 RefSeq gene 721590 724943 . + . ID=gene681;Name=YPZ3_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03415;old_locus_tag=YPZ3_0581 NC_014029.1 Protein Homology CDS 721590 724943 . + 0 ID=cds674;Parent=gene681;Dbxref=Genbank:WP_002214212.1;Name=WP_002214212.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214212.1;transl_table=11 NC_014029.1 RefSeq gene 725052 726038 . + . ID=gene682;Name=YPZ3_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03420;old_locus_tag=YPZ3_0582 NC_014029.1 Protein Homology CDS 725052 726038 . + 0 ID=cds675;Parent=gene682;Dbxref=Genbank:WP_002210384.1;Name=WP_002210384.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210384.1;transl_table=11 NC_014029.1 RefSeq gene 726115 727359 . + . ID=gene683;Name=YPZ3_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03425;old_locus_tag=YPZ3_0583 NC_014029.1 Protein Homology CDS 726115 727359 . + 0 ID=cds676;Parent=gene683;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11 NC_014029.1 RefSeq gene 727413 728294 . + . ID=gene684;Name=YPZ3_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03430;old_locus_tag=YPZ3_0584 NC_014029.1 Protein Homology CDS 727413 728294 . + 0 ID=cds677;Parent=gene684;Dbxref=Genbank:WP_002210382.1;Name=WP_002210382.1;gbkey=CDS;product=permease;protein_id=WP_002210382.1;transl_table=11 NC_014029.1 RefSeq gene 728294 729112 . + . ID=gene685;Name=YPZ3_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03435;old_locus_tag=YPZ3_0585 NC_014029.1 Protein Homology CDS 728294 729112 . + 0 ID=cds678;Parent=gene685;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11 NC_014029.1 RefSeq gene 729109 729624 . + . ID=gene686;Name=YPZ3_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03440;old_locus_tag=YPZ3_0586 NC_014029.1 Protein Homology CDS 729109 729624 . + 0 ID=cds679;Parent=gene686;Dbxref=Genbank:WP_002210380.1;Name=WP_002210380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210380.1;transl_table=11 NC_014029.1 RefSeq gene 729675 731858 . + . ID=gene687;Name=YPZ3_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03445;old_locus_tag=YPZ3_0587 NC_014029.1 Protein Homology CDS 729675 731858 . + 0 ID=cds680;Parent=gene687;Dbxref=Genbank:WP_002210379.1;Name=WP_002210379.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210379.1;transl_table=11 NC_014029.1 RefSeq gene 731922 733448 . - . ID=gene688;Name=YPZ3_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03450;old_locus_tag=YPZ3_0588 NC_014029.1 Protein Homology CDS 731922 733448 . - 0 ID=cds681;Parent=gene688;Dbxref=Genbank:WP_002214220.1;Name=WP_002214220.1;gbkey=CDS;product=transporter;protein_id=WP_002214220.1;transl_table=11 NC_014029.1 RefSeq gene 733453 735354 . - . ID=gene689;Name=YPZ3_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03455;old_locus_tag=YPZ3_0589 NC_014029.1 Protein Homology CDS 733453 735354 . - 0 ID=cds682;Parent=gene689;Dbxref=Genbank:WP_002210377.1;Name=WP_002210377.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_002210377.1;transl_table=11 NC_014029.1 RefSeq gene 735338 736387 . - . ID=gene690;Name=YPZ3_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03460;old_locus_tag=YPZ3_0590 NC_014029.1 Protein Homology CDS 735338 736387 . - 0 ID=cds683;Parent=gene690;Dbxref=Genbank:WP_002210376.1;Name=WP_002210376.1;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=WP_002210376.1;transl_table=11 NC_014029.1 RefSeq gene 736397 736732 . - . ID=gene691;Name=YPZ3_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03465 NC_014029.1 Protein Homology CDS 736397 736732 . - 0 ID=cds684;Parent=gene691;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11 NC_014029.1 RefSeq gene 736729 736929 . - . ID=gene692;Name=YPZ3_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03470 NC_014029.1 Protein Homology CDS 736729 736929 . - 0 ID=cds685;Parent=gene692;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NC_014029.1 RefSeq gene 737102 737209 . - . ID=gene693;Name=YPZ3_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03475 NC_014029.1 Protein Homology CDS 737102 737209 . - 0 ID=cds686;Parent=gene693;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11 NC_014029.1 RefSeq gene 737695 738916 . + . ID=gene694;Name=YPZ3_RS03480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS03480;pseudo=true NC_014029.1 Protein Homology CDS 737695 738916 . + 0 ID=cds687;Parent=gene694;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aminotransferase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 738909 740360 . + . ID=gene695;Name=YPZ3_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03485;old_locus_tag=YPZ3_0592 NC_014029.1 Protein Homology CDS 738909 740360 . + 0 ID=cds688;Parent=gene695;Dbxref=Genbank:WP_002214229.1;Name=WP_002214229.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002214229.1;transl_table=11 NC_014029.1 RefSeq gene 740373 740810 . + . ID=gene696;Name=YPZ3_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03490;old_locus_tag=YPZ3_0593 NC_014029.1 Protein Homology CDS 740373 740810 . + 0 ID=cds689;Parent=gene696;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11 NC_014029.1 RefSeq gene 740944 741570 . + . ID=gene697;Name=YPZ3_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03495;old_locus_tag=YPZ3_0594 NC_014029.1 Protein Homology CDS 740944 741570 . + 0 ID=cds690;Parent=gene697;Dbxref=Genbank:WP_002214230.1;Name=WP_002214230.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002214230.1;transl_table=11 NC_014029.1 RefSeq gene 741586 741966 . + . ID=gene698;Name=YPZ3_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03500;old_locus_tag=YPZ3_0595 NC_014029.1 Protein Homology CDS 741586 741966 . + 0 ID=cds691;Parent=gene698;Dbxref=Genbank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210370.1;transl_table=11 NC_014029.1 RefSeq gene 742251 742655 . + . ID=gene699;Name=YPZ3_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03505;old_locus_tag=YPZ3_0596 NC_014029.1 Protein Homology CDS 742251 742655 . + 0 ID=cds692;Parent=gene699;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11 NC_014029.1 RefSeq gene 742870 743172 . - . ID=gene700;Name=YPZ3_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03510;old_locus_tag=YPZ3_0597 NC_014029.1 Protein Homology CDS 742870 743172 . - 0 ID=cds693;Parent=gene700;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NC_014029.1 RefSeq gene 743432 744148 . - . ID=gene701;Name=YPZ3_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03515;old_locus_tag=YPZ3_0598 NC_014029.1 Protein Homology CDS 743432 744148 . - 0 ID=cds694;Parent=gene701;Dbxref=Genbank:WP_002210367.1;Name=WP_002210367.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002210367.1;transl_table=11 NC_014029.1 RefSeq gene 744310 745242 . + . ID=gene702;Name=YPZ3_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03520;old_locus_tag=YPZ3_0599 NC_014029.1 Protein Homology CDS 744310 745242 . + 0 ID=cds695;Parent=gene702;Dbxref=Genbank:WP_002210366.1;Name=WP_002210366.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210366.1;transl_table=11 NC_014029.1 RefSeq gene 745693 745896 . + . ID=gene703;Name=YPZ3_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03525 NC_014029.1 Protein Homology CDS 745693 745896 . + 0 ID=cds696;Parent=gene703;Dbxref=Genbank:WP_002210365.1;Name=WP_002210365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210365.1;transl_table=11 NC_014029.1 RefSeq gene 745992 746204 . + . ID=gene704;Name=YPZ3_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03530 NC_014029.1 Protein Homology CDS 745992 746204 . + 0 ID=cds697;Parent=gene704;Dbxref=Genbank:WP_002218980.1;Name=WP_002218980.1;gbkey=CDS;product=cell filamentation protein Fic;protein_id=WP_002218980.1;transl_table=11 NC_014029.1 RefSeq gene 746201 746359 . - . ID=gene705;Name=YPZ3_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03535 NC_014029.1 Protein Homology CDS 746201 746359 . - 0 ID=cds698;Parent=gene705;Dbxref=Genbank:WP_002210363.1;Name=WP_002210363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210363.1;transl_table=11 NC_014029.1 RefSeq gene 746557 746757 . - . ID=gene706;Name=YPZ3_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03540 NC_014029.1 Protein Homology CDS 746557 746757 . - 0 ID=cds699;Parent=gene706;Dbxref=Genbank:WP_002214239.1;Name=WP_002214239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214239.1;transl_table=11 NC_014029.1 RefSeq gene 746915 747145 . + . ID=gene707;Name=YPZ3_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03545 NC_014029.1 Protein Homology CDS 746915 747145 . + 0 ID=cds700;Parent=gene707;Dbxref=Genbank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11 NC_014029.1 RefSeq repeat_region 747159 747711 . + . ID=id46;gbkey=repeat_region NC_014029.1 RefSeq gene 747278 748660 . + . ID=gene708;Name=YPZ3_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03550;old_locus_tag=YPZ3_0600 NC_014029.1 Protein Homology CDS 747278 748660 . + 0 ID=cds701;Parent=gene708;Dbxref=Genbank:WP_002210362.1;Name=WP_002210362.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002210362.1;transl_table=11 NC_014029.1 RefSeq gene 748669 749139 . + . ID=gene709;Name=YPZ3_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03555;old_locus_tag=YPZ3_0601 NC_014029.1 Protein Homology CDS 748669 749139 . + 0 ID=cds702;Parent=gene709;Dbxref=Genbank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210361.1;transl_table=11 NC_014029.1 RefSeq gene 749166 749621 . + . ID=gene710;Name=YPZ3_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03560;old_locus_tag=YPZ3_0602 NC_014029.1 Protein Homology CDS 749166 749621 . + 0 ID=cds703;Parent=gene710;Dbxref=Genbank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210360.1;transl_table=11 NC_014029.1 RefSeq repeat_region 749626 749846 . + . ID=id47;gbkey=repeat_region NC_014029.1 RefSeq gene 749638 749928 . + . ID=gene711;Name=YPZ3_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03565 NC_014029.1 Protein Homology CDS 749638 749928 . + 0 ID=cds704;Parent=gene711;Dbxref=Genbank:WP_002217366.1;Name=WP_002217366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217366.1;transl_table=11 NC_014029.1 RefSeq gene 749906 750244 . + . ID=gene712;Name=YPZ3_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03570;old_locus_tag=YPZ3_0603 NC_014029.1 Protein Homology CDS 749906 750244 . + 0 ID=cds705;Parent=gene712;Dbxref=Genbank:WP_002217368.1;Name=WP_002217368.1;gbkey=CDS;product=terminase;protein_id=WP_002217368.1;transl_table=11 NC_014029.1 RefSeq gene 750490 750566 . - . ID=gene713;Name=YPZ3_RS03575;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS03575;old_locus_tag=YPZ3_t5 NC_014029.1 tRNAscan-SE tRNA 750490 750566 . - . ID=rna7;Parent=gene713;anticodon=(pos:complement(750530..750532));gbkey=tRNA;product=tRNA-Met NC_014029.1 tRNAscan-SE exon 750490 750566 . - . ID=id48;Parent=rna7;anticodon=(pos:complement(750530..750532));gbkey=tRNA;product=tRNA-Met NC_014029.1 RefSeq gene 750762 752600 . - . ID=gene714;Name=YPZ3_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03580;old_locus_tag=YPZ3_0604 NC_014029.1 Protein Homology CDS 750762 752600 . - 0 ID=cds706;Parent=gene714;Dbxref=Genbank:WP_002210359.1;Name=WP_002210359.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NC_014029.1 RefSeq gene 752758 754506 . - . ID=gene715;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=YPZ3_RS03585;old_locus_tag=YPZ3_0605 NC_014029.1 Protein Homology CDS 752758 754506 . - 0 ID=cds707;Parent=gene715;Dbxref=Genbank:WP_002210358.1;Name=WP_002210358.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NC_014029.1 RefSeq gene 754642 754857 . - . ID=gene716;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YPZ3_RS03590 NC_014029.1 Protein Homology CDS 754642 754857 . - 0 ID=cds708;Parent=gene716;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NC_014029.1 RefSeq gene 755263 756276 . + . ID=gene717;Name=YPZ3_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03595;old_locus_tag=YPZ3_0606 NC_014029.1 Protein Homology CDS 755263 756276 . + 0 ID=cds709;Parent=gene717;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11 NC_014029.1 RefSeq gene 756522 757172 . - . ID=gene718;Name=YPZ3_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03600;old_locus_tag=YPZ3_0607 NC_014029.1 Protein Homology CDS 756522 757172 . - 0 ID=cds710;Parent=gene718;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11 NC_014029.1 RefSeq gene 757280 757639 . + . ID=gene719;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YPZ3_RS03605;old_locus_tag=YPZ3_0608 NC_014029.1 Protein Homology CDS 757280 757639 . + 0 ID=cds711;Parent=gene719;Dbxref=Genbank:WP_002212199.1;Name=WP_002212199.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002212199.1;transl_table=11 NC_014029.1 RefSeq gene 757913 758731 . + . ID=gene720;Name=YPZ3_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03610;old_locus_tag=YPZ3_0609 NC_014029.1 Protein Homology CDS 757913 758731 . + 0 ID=cds712;Parent=gene720;Dbxref=Genbank:WP_002212198.1;Name=WP_002212198.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_002212198.1;transl_table=11 NC_014029.1 RefSeq gene 758967 760205 . - . ID=gene721;Name=YPZ3_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03615;old_locus_tag=YPZ3_0610 NC_014029.1 Protein Homology CDS 758967 760205 . - 0 ID=cds713;Parent=gene721;Dbxref=Genbank:WP_002212197.1;Name=WP_002212197.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_002212197.1;transl_table=11 NC_014029.1 RefSeq gene 760365 760988 . - . ID=gene722;Name=YPZ3_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03620;old_locus_tag=YPZ3_0611 NC_014029.1 Protein Homology CDS 760365 760988 . - 0 ID=cds714;Parent=gene722;Dbxref=Genbank:WP_002212196.1;Name=WP_002212196.1;gbkey=CDS;product=signal transduction protein;protein_id=WP_002212196.1;transl_table=11 NC_014029.1 RefSeq gene 761292 762599 . + . ID=gene723;Name=YPZ3_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03625;old_locus_tag=YPZ3_0612 NC_014029.1 Protein Homology CDS 761292 762599 . + 0 ID=cds715;Parent=gene723;Dbxref=Genbank:WP_002212195.1;Name=WP_002212195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212195.1;transl_table=11 NC_014029.1 RefSeq gene 762770 765625 . + . ID=gene724;Name=YPZ3_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03630;old_locus_tag=YPZ3_0613 NC_014029.1 Protein Homology CDS 762770 765625 . + 0 ID=cds716;Parent=gene724;Dbxref=Genbank:WP_002212194.1;Name=WP_002212194.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_002212194.1;transl_table=11 NC_014029.1 RefSeq gene 765760 767190 . + . ID=gene725;Name=YPZ3_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03635;old_locus_tag=YPZ3_0614 NC_014029.1 Protein Homology CDS 765760 767190 . + 0 ID=cds717;Parent=gene725;Dbxref=Genbank:WP_002212193.1;Name=WP_002212193.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_002212193.1;transl_table=11 NC_014029.1 RefSeq gene 767227 768477 . + . ID=gene726;Name=YPZ3_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03640;old_locus_tag=YPZ3_0615 NC_014029.1 Protein Homology CDS 767227 768477 . + 0 ID=cds718;Parent=gene726;Dbxref=Genbank:WP_002212192.1;Name=WP_002212192.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_002212192.1;transl_table=11 NC_014029.1 RefSeq repeat_region 768514 768688 . + . ID=id49;gbkey=repeat_region NC_014029.1 RefSeq gene 768802 769083 . - . ID=gene727;Name=YPZ3_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03645 NC_014029.1 Protein Homology CDS 768802 769083 . - 0 ID=cds719;Parent=gene727;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11 NC_014029.1 RefSeq gene 769119 769463 . - . ID=gene728;Name=YPZ3_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03650 NC_014029.1 Protein Homology CDS 769119 769463 . - 0 ID=cds720;Parent=gene728;Dbxref=Genbank:WP_014465988.1;Name=WP_014465988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014465988.1;transl_table=11 NC_014029.1 RefSeq gene 769652 770305 . + . ID=gene729;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YPZ3_RS03655;old_locus_tag=YPZ3_0616 NC_014029.1 Protein Homology CDS 769652 770305 . + 0 ID=cds721;Parent=gene729;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NC_014029.1 RefSeq gene 770764 771546 . + . ID=gene730;Name=YPZ3_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03660;old_locus_tag=YPZ3_0617 NC_014029.1 Protein Homology CDS 770764 771546 . + 0 ID=cds722;Parent=gene730;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11 NC_014029.1 RefSeq repeat_region 771547 771917 . + . ID=id50;gbkey=repeat_region NC_014029.1 RefSeq gene 771953 773113 . - . ID=gene731;Name=YPZ3_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03665;old_locus_tag=YPZ3_0618 NC_014029.1 Protein Homology CDS 771953 773113 . - 0 ID=cds723;Parent=gene731;Dbxref=Genbank:WP_002212188.1;Name=WP_002212188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212188.1;transl_table=11 NC_014029.1 RefSeq gene 773123 773806 . - . ID=gene732;Name=YPZ3_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03670;old_locus_tag=YPZ3_0619 NC_014029.1 Protein Homology CDS 773123 773806 . - 0 ID=cds724;Parent=gene732;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11 NC_014029.1 RefSeq gene 773875 774045 . + . ID=gene733;Name=YPZ3_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03675 NC_014029.1 Protein Homology CDS 773875 774045 . + 0 ID=cds725;Parent=gene733;Dbxref=Genbank:WP_002223694.1;Name=WP_002223694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223694.1;transl_table=11 NC_014029.1 RefSeq gene 774110 775507 . - . ID=gene734;Name=YPZ3_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03680;old_locus_tag=YPZ3_0620 NC_014029.1 Protein Homology CDS 774110 775507 . - 0 ID=cds726;Parent=gene734;Dbxref=Genbank:WP_002212186.1;Name=WP_002212186.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_002212186.1;transl_table=11 NC_014029.1 RefSeq gene 775903 776535 . + . ID=gene735;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YPZ3_RS03685;old_locus_tag=YPZ3_0621 NC_014029.1 Protein Homology CDS 775903 776535 . + 0 ID=cds727;Parent=gene735;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11 NC_014029.1 RefSeq gene 776569 776994 . + . ID=gene736;Name=YPZ3_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03690;old_locus_tag=YPZ3_0622 NC_014029.1 Protein Homology CDS 776569 776994 . + 0 ID=cds728;Parent=gene736;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11 NC_014029.1 RefSeq gene 777076 777903 . + . ID=gene737;Name=YPZ3_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03695;old_locus_tag=YPZ3_0623 NC_014029.1 Protein Homology CDS 777076 777903 . + 0 ID=cds729;Parent=gene737;Dbxref=Genbank:WP_002217438.1;Name=WP_002217438.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002217438.1;transl_table=11 NC_014029.1 RefSeq gene 777903 778484 . + . ID=gene738;Name=YPZ3_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03700;old_locus_tag=YPZ3_0624 NC_014029.1 Protein Homology CDS 777903 778484 . + 0 ID=cds730;Parent=gene738;Dbxref=Genbank:WP_002212182.1;Name=WP_002212182.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_002212182.1;transl_table=11 NC_014029.1 RefSeq gene 778586 780481 . + . ID=gene739;Name=YPZ3_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03705;old_locus_tag=YPZ3_0625 NC_014029.1 Protein Homology CDS 778586 780481 . + 0 ID=cds731;Parent=gene739;Dbxref=Genbank:WP_002212181.1;Name=WP_002212181.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NC_014029.1 RefSeq gene 780485 781396 . + . ID=gene740;Name=YPZ3_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03710;old_locus_tag=YPZ3_0626 NC_014029.1 Protein Homology CDS 780485 781396 . + 0 ID=cds732;Parent=gene740;Dbxref=Genbank:WP_002212180.1;Name=WP_002212180.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212180.1;transl_table=11 NC_014029.1 RefSeq gene 781454 782038 . - . ID=gene741;Name=YPZ3_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03715;old_locus_tag=YPZ3_0627 NC_014029.1 Protein Homology CDS 781454 782038 . - 0 ID=cds733;Parent=gene741;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11 NC_014029.1 RefSeq gene 782342 784615 . + . ID=gene742;Name=YPZ3_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03720;old_locus_tag=YPZ3_0628 NC_014029.1 Protein Homology CDS 782342 784615 . + 0 ID=cds734;Parent=gene742;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NC_014029.1 RefSeq gene 784904 785635 . + . ID=gene743;Name=YPZ3_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03725;old_locus_tag=YPZ3_0629 NC_014029.1 Protein Homology CDS 784904 785635 . + 0 ID=cds735;Parent=gene743;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11 NC_014029.1 RefSeq gene 785814 787238 . + . ID=gene744;Name=YPZ3_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03730;old_locus_tag=YPZ3_0630 NC_014029.1 Protein Homology CDS 785814 787238 . + 0 ID=cds736;Parent=gene744;Dbxref=Genbank:WP_002212176.1;Name=WP_002212176.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsP;protein_id=WP_002212176.1;transl_table=11 NC_014029.1 RefSeq gene 787546 789890 . + . ID=gene745;Name=YPZ3_RS03735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS03735;pseudo=true NC_014029.1 Protein Homology CDS 787546 789890 . + 0 ID=cds737;Parent=gene745;exception=annotated by transcript or proteomic data;gbkey=CDS;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 789912 790745 . - . ID=gene746;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YPZ3_RS03740;old_locus_tag=YPZ3_0633 NC_014029.1 Protein Homology CDS 789912 790745 . - 0 ID=cds738;Parent=gene746;Dbxref=Genbank:WP_002212175.1;Name=WP_002212175.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase A;protein_id=WP_002212175.1;transl_table=11 NC_014029.1 RefSeq gene 790892 791101 . + . ID=gene747;Name=YPZ3_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03745 NC_014029.1 Protein Homology CDS 790892 791101 . + 0 ID=cds739;Parent=gene747;Dbxref=Genbank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11 NC_014029.1 RefSeq gene 791164 792321 . - . ID=gene748;Name=YPZ3_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03750;old_locus_tag=YPZ3_0634 NC_014029.1 Protein Homology CDS 791164 792321 . - 0 ID=cds740;Parent=gene748;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11 NC_014029.1 RefSeq gene 792719 793612 . + . ID=gene749;Name=YPZ3_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03755;old_locus_tag=YPZ3_0635 NC_014029.1 Protein Homology CDS 792719 793612 . + 0 ID=cds741;Parent=gene749;Dbxref=Genbank:WP_002213786.1;Name=WP_002213786.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NC_014029.1 RefSeq gene 793704 794366 . - . ID=gene750;Name=YPZ3_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03760;old_locus_tag=YPZ3_0636 NC_014029.1 Protein Homology CDS 793704 794366 . - 0 ID=cds742;Parent=gene750;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11 NC_014029.1 RefSeq gene 794559 795770 . - . ID=gene751;Name=YPZ3_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03765;old_locus_tag=YPZ3_0637 NC_014029.1 Protein Homology CDS 794559 795770 . - 0 ID=cds743;Parent=gene751;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NC_014029.1 RefSeq gene 796567 797280 . + . ID=gene752;Name=YPZ3_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03770 NC_014029.1 Protein Homology CDS 796567 797280 . + 0 ID=cds744;Parent=gene752;Dbxref=Genbank:WP_002353766.1;Name=WP_002353766.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_002353766.1;transl_table=11 NC_014029.1 RefSeq gene 797284 797715 . + . ID=gene753;Name=YPZ3_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03775;old_locus_tag=YPZ3_0639 NC_014029.1 Protein Homology CDS 797284 797715 . + 0 ID=cds745;Parent=gene753;Dbxref=Genbank:WP_002212170.1;Name=WP_002212170.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_002212170.1;transl_table=11 NC_014029.1 RefSeq gene 797812 799368 . - . ID=gene754;Name=YPZ3_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03780;old_locus_tag=YPZ3_0640 NC_014029.1 Protein Homology CDS 797812 799368 . - 0 ID=cds746;Parent=gene754;Dbxref=Genbank:WP_002212169.1;Name=WP_002212169.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212169.1;transl_table=11 NC_014029.1 RefSeq gene 799393 799965 . - . ID=gene755;Name=YPZ3_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03785;old_locus_tag=YPZ3_0641 NC_014029.1 Protein Homology CDS 799393 799965 . - 0 ID=cds747;Parent=gene755;Dbxref=Genbank:WP_002212168.1;Name=WP_002212168.1;gbkey=CDS;product=pseudopilin;protein_id=WP_002212168.1;transl_table=11 NC_014029.1 RefSeq gene 799949 800422 . - . ID=gene756;Name=YPZ3_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03790;old_locus_tag=YPZ3_0642 NC_014029.1 Protein Homology CDS 799949 800422 . - 0 ID=cds748;Parent=gene756;Dbxref=Genbank:WP_002357277.1;Name=WP_002357277.1;gbkey=CDS;product=pilus biosynthesis protein TadE;protein_id=WP_002357277.1;transl_table=11 NC_014029.1 RefSeq gene 800419 801189 . - . ID=gene757;Name=YPZ3_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03795;old_locus_tag=YPZ3_0643 NC_014029.1 Protein Homology CDS 800419 801189 . - 0 ID=cds749;Parent=gene757;Dbxref=Genbank:WP_002212166.1;Name=WP_002212166.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212166.1;transl_table=11 NC_014029.1 RefSeq gene 801173 802006 . - . ID=gene758;Name=YPZ3_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03800;old_locus_tag=YPZ3_0644 NC_014029.1 Protein Homology CDS 801173 802006 . - 0 ID=cds750;Parent=gene758;Dbxref=Genbank:WP_002212165.1;Name=WP_002212165.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212165.1;transl_table=11 NC_014029.1 RefSeq gene 802003 802878 . - . ID=gene759;Name=YPZ3_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03805;old_locus_tag=YPZ3_0645 NC_014029.1 Protein Homology CDS 802003 802878 . - 0 ID=cds751;Parent=gene759;Dbxref=Genbank:WP_002212164.1;Name=WP_002212164.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212164.1;transl_table=11 NC_014029.1 RefSeq gene 802875 804161 . - . ID=gene760;Name=YPZ3_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03810;old_locus_tag=YPZ3_0646 NC_014029.1 Protein Homology CDS 802875 804161 . - 0 ID=cds752;Parent=gene760;Dbxref=Genbank:WP_002213785.1;Name=WP_002213785.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002213785.1;transl_table=11 NC_014029.1 RefSeq gene 804173 805300 . - . ID=gene761;Name=YPZ3_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03815;old_locus_tag=YPZ3_0647 NC_014029.1 Protein Homology CDS 804173 805300 . - 0 ID=cds753;Parent=gene761;Dbxref=Genbank:WP_002213784.1;Name=WP_002213784.1;gbkey=CDS;product=pilus assembly protein CpaE;protein_id=WP_002213784.1;transl_table=11 NC_014029.1 RefSeq gene 805311 805601 . - . ID=gene762;Name=YPZ3_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03820 NC_014029.1 Protein Homology CDS 805311 805601 . - 0 ID=cds754;Parent=gene762;Dbxref=Genbank:WP_002213782.1;Name=WP_002213782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213782.1;transl_table=11 NC_014029.1 RefSeq gene 805598 806047 . - . ID=gene763;Name=YPZ3_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03825;old_locus_tag=YPZ3_0648 NC_014029.1 Protein Homology CDS 805598 806047 . - 0 ID=cds755;Parent=gene763;Dbxref=Genbank:WP_002228297.1;Name=WP_002228297.1;gbkey=CDS;product=secretion protein;protein_id=WP_002228297.1;transl_table=11 NC_014029.1 RefSeq gene 806062 806916 . - . ID=gene764;Name=YPZ3_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03830;old_locus_tag=YPZ3_0649 NC_014029.1 Protein Homology CDS 806062 806916 . - 0 ID=cds756;Parent=gene764;Dbxref=Genbank:WP_002213778.1;Name=WP_002213778.1;gbkey=CDS;product=pilus assembly protein CpaC;protein_id=WP_002213778.1;transl_table=11 NC_014029.1 RefSeq gene 806913 807779 . - . ID=gene765;Name=YPZ3_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03835;old_locus_tag=YPZ3_0650 NC_014029.1 Protein Homology CDS 806913 807779 . - 0 ID=cds757;Parent=gene765;Dbxref=Genbank:WP_002211460.1;Name=WP_002211460.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211460.1;transl_table=11 NC_014029.1 RefSeq gene 807831 808253 . - . ID=gene766;Name=YPZ3_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03840;old_locus_tag=YPZ3_0651 NC_014029.1 Protein Homology CDS 807831 808253 . - 0 ID=cds758;Parent=gene766;Dbxref=Genbank:WP_002211459.1;Name=WP_002211459.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211459.1;transl_table=11 NC_014029.1 RefSeq repeat_region 808304 809732 . + . ID=id51;gbkey=repeat_region NC_014029.1 RefSeq gene 808453 808911 . + . ID=gene767;Name=YPZ3_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03845;old_locus_tag=YPZ3_0652 NC_014029.1 Protein Homology CDS 808453 808911 . + 0 ID=cds759;Parent=gene767;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 809001 809174 . + . ID=gene768;Name=YPZ3_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03850 NC_014029.1 Protein Homology CDS 809001 809174 . + 0 ID=cds760;Parent=gene768;Dbxref=Genbank:WP_002216755.1;Name=WP_002216755.1;gbkey=CDS;product=invasin;protein_id=WP_002216755.1;transl_table=11 NC_014029.1 RefSeq gene 809164 809622 . + . ID=gene769;Name=YPZ3_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03855;old_locus_tag=YPZ3_0653 NC_014029.1 Protein Homology CDS 809164 809622 . + 0 ID=cds761;Parent=gene769;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 809975 812455 . + . ID=gene770;Name=YPZ3_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03860;old_locus_tag=YPZ3_0654 NC_014029.1 Protein Homology CDS 809975 812455 . + 0 ID=cds762;Parent=gene770;Dbxref=Genbank:WP_002211458.1;Name=WP_002211458.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211458.1;transl_table=11 NC_014029.1 RefSeq gene 812473 813192 . + . ID=gene771;Name=YPZ3_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03865;old_locus_tag=YPZ3_0655 NC_014029.1 Protein Homology CDS 812473 813192 . + 0 ID=cds763;Parent=gene771;Dbxref=Genbank:WP_002211457.1;Name=WP_002211457.1;gbkey=CDS;product=fimbrial chaperone protein;protein_id=WP_002211457.1;transl_table=11 NC_014029.1 RefSeq gene 813217 814323 . + . ID=gene772;Name=YPZ3_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03870;old_locus_tag=YPZ3_0656 NC_014029.1 Protein Homology CDS 813217 814323 . + 0 ID=cds764;Parent=gene772;Dbxref=Genbank:WP_002211456.1;Name=WP_002211456.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211456.1;transl_table=11 NC_014029.1 RefSeq repeat_region 814370 814507 . + . ID=id52;gbkey=repeat_region NC_014029.1 RefSeq gene 814535 815614 . - . ID=gene773;Name=YPZ3_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03875;old_locus_tag=YPZ3_0657 NC_014029.1 Protein Homology CDS 814535 815614 . - 0 ID=cds765;Parent=gene773;Dbxref=Genbank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11 NC_014029.1 RefSeq gene 816470 817465 . + . ID=gene774;Name=YPZ3_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03880;old_locus_tag=YPZ3_0658 NC_014029.1 Protein Homology CDS 816470 817465 . + 0 ID=cds766;Parent=gene774;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11 NC_014029.1 RefSeq gene 817557 818126 . - . ID=gene775;Name=YPZ3_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03885 NC_014029.1 Protein Homology CDS 817557 818126 . - 0 ID=cds767;Parent=gene775;Dbxref=Genbank:WP_002228082.1;Name=WP_002228082.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002228082.1;transl_table=11 NC_014029.1 RefSeq gene 818338 820435 . - . ID=gene776;Name=YPZ3_RS03890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS03890;pseudo=true NC_014029.1 Protein Homology CDS 818338 820435 . - 0 ID=cds768;Parent=gene776;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 820422 821555 . - . ID=gene777;Name=YPZ3_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03895;old_locus_tag=YPZ3_0661 NC_014029.1 Protein Homology CDS 820422 821555 . - 0 ID=cds769;Parent=gene777;Dbxref=Genbank:WP_002211451.1;Name=WP_002211451.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211451.1;transl_table=11 NC_014029.1 RefSeq gene 821555 822328 . - . ID=gene778;Name=YPZ3_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03900;old_locus_tag=YPZ3_0662 NC_014029.1 Protein Homology CDS 821555 822328 . - 0 ID=cds770;Parent=gene778;Dbxref=Genbank:WP_002213766.1;Name=WP_002213766.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_002213766.1;transl_table=11 NC_014029.1 RefSeq gene 822335 822607 . - . ID=gene779;Name=YPZ3_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03905 NC_014029.1 Protein Homology CDS 822335 822607 . - 0 ID=cds771;Parent=gene779;Dbxref=Genbank:WP_002211449.1;Name=WP_002211449.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11 NC_014029.1 RefSeq gene 822609 823379 . - . ID=gene780;Name=YPZ3_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03910;old_locus_tag=YPZ3_0663 NC_014029.1 Protein Homology CDS 822609 823379 . - 0 ID=cds772;Parent=gene780;Dbxref=Genbank:WP_002211448.1;Name=WP_002211448.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_002211448.1;transl_table=11 NC_014029.1 RefSeq gene 823376 823789 . - . ID=gene781;Name=YPZ3_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03915;old_locus_tag=YPZ3_0664 NC_014029.1 Protein Homology CDS 823376 823789 . - 0 ID=cds773;Parent=gene781;Dbxref=Genbank:WP_002211447.1;Name=WP_002211447.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11 NC_014029.1 RefSeq gene 823782 824681 . - . ID=gene782;Name=YPZ3_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03920;old_locus_tag=YPZ3_0665 NC_014029.1 Protein Homology CDS 823782 824681 . - 0 ID=cds774;Parent=gene782;Dbxref=Genbank:WP_002211446.1;Name=WP_002211446.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_002211446.1;transl_table=11 NC_014029.1 RefSeq gene 825204 826232 . + . ID=gene783;Name=YPZ3_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03925;old_locus_tag=YPZ3_0666 NC_014029.1 Protein Homology CDS 825204 826232 . + 0 ID=cds775;Parent=gene783;Dbxref=Genbank:WP_002211445.1;Name=WP_002211445.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002211445.1;transl_table=11 NC_014029.1 RefSeq gene 826249 826629 . + . ID=gene784;Name=YPZ3_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03930;old_locus_tag=YPZ3_0667 NC_014029.1 Protein Homology CDS 826249 826629 . + 0 ID=cds776;Parent=gene784;Dbxref=Genbank:WP_002211444.1;Name=WP_002211444.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_002211444.1;transl_table=11 NC_014029.1 RefSeq gene 826639 828279 . + . ID=gene785;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPZ3_RS03935;old_locus_tag=YPZ3_0668 NC_014029.1 Protein Homology CDS 826639 828279 . + 0 ID=cds777;Parent=gene785;Dbxref=Genbank:WP_002211443.1;Name=WP_002211443.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=WP_002211443.1;transl_table=11 NC_014029.1 RefSeq gene 828251 829294 . + . ID=gene786;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPZ3_RS03940;old_locus_tag=YPZ3_0669 NC_014029.1 Protein Homology CDS 828251 829294 . + 0 ID=cds778;Parent=gene786;Dbxref=Genbank:WP_002211442.1;Name=WP_002211442.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11 NC_014029.1 RefSeq gene 829299 830015 . + . ID=gene787;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPZ3_RS03945;old_locus_tag=YPZ3_0670 NC_014029.1 Protein Homology CDS 829299 830015 . + 0 ID=cds779;Parent=gene787;Dbxref=Genbank:WP_002213763.1;Name=WP_002213763.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_002213763.1;transl_table=11 NC_014029.1 RefSeq gene 830008 831348 . + . ID=gene788;Name=YPZ3_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03950;old_locus_tag=YPZ3_0671 NC_014029.1 Protein Homology CDS 830008 831348 . + 0 ID=cds780;Parent=gene788;Dbxref=Genbank:WP_002211440.1;Name=WP_002211440.1;gbkey=CDS;product=flagellum-specific ATP synthase;protein_id=WP_002211440.1;transl_table=11 NC_014029.1 RefSeq gene 831352 831789 . + . ID=gene789;Name=YPZ3_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03955;old_locus_tag=YPZ3_0672 NC_014029.1 Protein Homology CDS 831352 831789 . + 0 ID=cds781;Parent=gene789;Dbxref=Genbank:WP_002223686.1;Name=WP_002223686.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_002223686.1;transl_table=11 NC_014029.1 RefSeq gene 832117 832542 . - . ID=gene790;Name=YPZ3_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03960;old_locus_tag=YPZ3_0673 NC_014029.1 Protein Homology CDS 832117 832542 . - 0 ID=cds782;Parent=gene790;Dbxref=Genbank:WP_002211438.1;Name=WP_002211438.1;gbkey=CDS;product=flagellar protein FlgN;protein_id=WP_002211438.1;transl_table=11 NC_014029.1 RefSeq gene 832549 832815 . - . ID=gene791;Name=YPZ3_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03965 NC_014029.1 Protein Homology CDS 832549 832815 . - 0 ID=cds783;Parent=gene791;Dbxref=Genbank:WP_002211437.1;Name=WP_002211437.1;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211437.1;transl_table=11 NC_014029.1 RefSeq gene 833044 833892 . - . ID=gene792;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPZ3_RS03970;old_locus_tag=YPZ3_0674 NC_014029.1 Protein Homology CDS 833044 833892 . - 0 ID=cds784;Parent=gene792;Dbxref=Genbank:WP_002211436.1;Name=WP_002211436.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002211436.1;transl_table=11 NC_014029.1 RefSeq gene 833950 834396 . + . ID=gene793;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPZ3_RS03975;old_locus_tag=YPZ3_0675 NC_014029.1 Protein Homology CDS 833950 834396 . + 0 ID=cds785;Parent=gene793;Dbxref=Genbank:WP_002211435.1;Name=WP_002211435.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211435.1;transl_table=11 NC_014029.1 RefSeq gene 834399 834824 . + . ID=gene794;Name=YPZ3_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03980;old_locus_tag=YPZ3_0676 NC_014029.1 Protein Homology CDS 834399 834824 . + 0 ID=cds786;Parent=gene794;Dbxref=Genbank:WP_002211434.1;Name=WP_002211434.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11 NC_014029.1 RefSeq gene 834827 835483 . + . ID=gene795;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPZ3_RS03985;old_locus_tag=YPZ3_0677 NC_014029.1 Protein Homology CDS 834827 835483 . + 0 ID=cds787;Parent=gene795;Dbxref=Genbank:WP_002211433.1;Name=WP_002211433.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_002211433.1;transl_table=11 NC_014029.1 RefSeq gene 835538 836779 . + . ID=gene796;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPZ3_RS03990;old_locus_tag=YPZ3_0678 NC_014029.1 Protein Homology CDS 835538 836779 . + 0 ID=cds788;Parent=gene796;Dbxref=Genbank:WP_002211432.1;Name=WP_002211432.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211432.1;transl_table=11 NC_014029.1 RefSeq gene 836779 836967 . + . ID=gene797;Name=YPZ3_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS03995 NC_014029.1 Protein Homology CDS 836779 836967 . + 0 ID=cds789;Parent=gene797;Dbxref=Genbank:WP_002213760.1;Name=WP_002213760.1;gbkey=CDS;product=flagellar basal-body rod protein FlgF;protein_id=WP_002213760.1;transl_table=11 NC_014029.1 RefSeq repeat_region 836892 837610 . + . ID=id53;gbkey=repeat_region NC_014029.1 RefSeq gene 837003 837461 . - . ID=gene798;Name=YPZ3_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04000;old_locus_tag=YPZ3_0679 NC_014029.1 Protein Homology CDS 837003 837461 . - 0 ID=cds790;Parent=gene798;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 837451 837624 . - . ID=gene799;Name=YPZ3_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04005 NC_014029.1 Protein Homology CDS 837451 837624 . - 0 ID=cds791;Parent=gene799;Dbxref=Genbank:WP_025470745.1;Name=WP_025470745.1;gbkey=CDS;product=transposase;protein_id=WP_025470745.1;transl_table=11 NC_014029.1 RefSeq gene 837628 838221 . + . ID=gene800;Name=YPZ3_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04010;old_locus_tag=YPZ3_0680 NC_014029.1 Protein Homology CDS 837628 838221 . + 0 ID=cds792;Parent=gene800;Dbxref=Genbank:WP_002211431.1;Name=WP_002211431.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_002211431.1;transl_table=11 NC_014029.1 RefSeq gene 838289 839074 . + . ID=gene801;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPZ3_RS04015;old_locus_tag=YPZ3_0681 NC_014029.1 Protein Homology CDS 838289 839074 . + 0 ID=cds793;Parent=gene801;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NC_014029.1 RefSeq gene 839109 839774 . + . ID=gene802;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPZ3_RS04020;old_locus_tag=YPZ3_0682 NC_014029.1 Protein Homology CDS 839109 839774 . + 0 ID=cds794;Parent=gene802;Dbxref=Genbank:WP_002211429.1;Name=WP_002211429.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein FlgH;protein_id=WP_002211429.1;transl_table=11 NC_014029.1 RefSeq gene 839821 840964 . + . ID=gene803;Name=YPZ3_RS04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS04025;old_locus_tag=YPZ3_0683;pseudo=true NC_014029.1 Protein Homology CDS 839821 840964 . + 0 ID=cds795;Parent=gene803;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar biosynthesis protein FlgI;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 840974 841267 . + . ID=gene804;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS04030 NC_014029.1 Protein Homology CDS 840974 841267 . + 0 ID=cds796;Parent=gene804;Dbxref=Genbank:WP_002211427.1;Name=WP_002211427.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_002211427.1;transl_table=11 NC_014029.1 RefSeq gene 841380 842741 . + . ID=gene805;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPZ3_RS04035;old_locus_tag=YPZ3_0684 NC_014029.1 Protein Homology CDS 841380 842741 . + 0 ID=cds797;Parent=gene805;Dbxref=Genbank:WP_002211426.1;Name=WP_002211426.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211426.1;transl_table=11 NC_014029.1 RefSeq gene 842770 843693 . + . ID=gene806;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPZ3_RS04040;old_locus_tag=YPZ3_0685 NC_014029.1 Protein Homology CDS 842770 843693 . + 0 ID=cds798;Parent=gene806;Dbxref=Genbank:WP_002211425.1;Name=WP_002211425.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211425.1;transl_table=11 NC_014029.1 RefSeq gene 843705 844718 . + . ID=gene807;Name=YPZ3_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04045;old_locus_tag=YPZ3_0686 NC_014029.1 Protein Homology CDS 843705 844718 . + 0 ID=cds799;Parent=gene807;Dbxref=Genbank:WP_002211424.1;Name=WP_002211424.1;gbkey=CDS;product=flagellar hook associated protein lafW;protein_id=WP_002211424.1;transl_table=11 NC_014029.1 RefSeq gene 844882 845328 . - . ID=gene808;Name=YPZ3_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04050;old_locus_tag=YPZ3_0687 NC_014029.1 Protein Homology CDS 844882 845328 . - 0 ID=cds800;Parent=gene808;Dbxref=Genbank:WP_002211423.1;Name=WP_002211423.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211423.1;transl_table=11 NC_014029.1 RefSeq gene 845309 846355 . - . ID=gene809;Name=YPZ3_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04055;old_locus_tag=YPZ3_0688 NC_014029.1 Protein Homology CDS 845309 846355 . - 0 ID=cds801;Parent=gene809;Dbxref=Genbank:WP_002211422.1;Name=WP_002211422.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211422.1;transl_table=11 NC_014029.1 RefSeq repeat_region 846979 847510 . + . ID=id54;gbkey=repeat_region NC_014029.1 RefSeq gene 846981 848195 . + . ID=gene810;Name=YPZ3_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04060;old_locus_tag=YPZ3_0689 NC_014029.1 Protein Homology CDS 846981 848195 . + 0 ID=cds802;Parent=gene810;Dbxref=Genbank:WP_002213753.1;Name=WP_002213753.1;gbkey=CDS;product=flagellin;protein_id=WP_002213753.1;transl_table=11 NC_014029.1 RefSeq repeat_region 847887 848264 . + . ID=id55;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 848465 849236 . + . ID=id56;gbkey=repeat_region NC_014029.1 RefSeq gene 848710 849909 . + . ID=gene811;Name=YPZ3_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04065;old_locus_tag=YPZ3_0690 NC_014029.1 Protein Homology CDS 848710 849909 . + 0 ID=cds803;Parent=gene811;Dbxref=Genbank:WP_002211420.1;Name=WP_002211420.1;gbkey=CDS;product=flagellin;protein_id=WP_002211420.1;transl_table=11 NC_014029.1 RefSeq repeat_region 849342 850721 . + . ID=id57;gbkey=repeat_region NC_014029.1 RefSeq gene 850192 851397 . + . ID=gene812;Name=YPZ3_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04070;old_locus_tag=YPZ3_0691 NC_014029.1 Protein Homology CDS 850192 851397 . + 0 ID=cds804;Parent=gene812;Dbxref=Genbank:WP_002211419.1;Name=WP_002211419.1;gbkey=CDS;product=flagellin;protein_id=WP_002211419.1;transl_table=11 NC_014029.1 RefSeq repeat_region 850830 851405 . + . ID=id58;gbkey=repeat_region NC_014029.1 RefSeq gene 851617 852894 . + . ID=gene813;Name=YPZ3_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04075;old_locus_tag=YPZ3_0692 NC_014029.1 Protein Homology CDS 851617 852894 . + 0 ID=cds805;Parent=gene813;Dbxref=Genbank:WP_002211418.1;Name=WP_002211418.1;gbkey=CDS;product=flagellar hook-associated protein;protein_id=WP_002211418.1;transl_table=11 NC_014029.1 RefSeq gene 852904 853284 . + . ID=gene814;Name=YPZ3_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04080;old_locus_tag=YPZ3_0693 NC_014029.1 Protein Homology CDS 852904 853284 . + 0 ID=cds806;Parent=gene814;Dbxref=Genbank:WP_002211417.1;Name=WP_002211417.1;gbkey=CDS;product=flagellar export chaperone FliS;protein_id=WP_002211417.1;transl_table=11 NC_014029.1 RefSeq gene 853286 853612 . + . ID=gene815;Name=YPZ3_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04085;old_locus_tag=YPZ3_0694 NC_014029.1 Protein Homology CDS 853286 853612 . + 0 ID=cds807;Parent=gene815;Dbxref=Genbank:WP_002211416.1;Name=WP_002211416.1;gbkey=CDS;product=flagellar protein lafD;protein_id=WP_002211416.1;transl_table=11 NC_014029.1 RefSeq gene 853614 854795 . + . ID=gene816;Name=YPZ3_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04090;old_locus_tag=YPZ3_0695 NC_014029.1 Protein Homology CDS 853614 854795 . + 0 ID=cds808;Parent=gene816;Dbxref=Genbank:WP_002211415.1;Name=WP_002211415.1;gbkey=CDS;product=flagellar hook-length control protein;protein_id=WP_002211415.1;transl_table=11 NC_014029.1 RefSeq repeat_region 854132 854269 . + . ID=id59;gbkey=repeat_region NC_014029.1 RefSeq gene 854834 855304 . + . ID=gene817;Name=YPZ3_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04095;old_locus_tag=YPZ3_0696 NC_014029.1 Protein Homology CDS 854834 855304 . + 0 ID=cds809;Parent=gene817;Dbxref=Genbank:WP_002211414.1;Name=WP_002211414.1;gbkey=CDS;product=flagellar protein;protein_id=WP_002211414.1;transl_table=11 NC_014029.1 RefSeq gene 855310 856005 . + . ID=gene818;Name=YPZ3_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04100;old_locus_tag=YPZ3_0697 NC_014029.1 Protein Homology CDS 855310 856005 . + 0 ID=cds810;Parent=gene818;Dbxref=Genbank:WP_002211413.1;Name=WP_002211413.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;product=DNA-directed RNA polymerase sigma-70 factor;protein_id=WP_002211413.1;transl_table=11 NC_014029.1 RefSeq gene 856021 856887 . + . ID=gene819;Name=YPZ3_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04105;old_locus_tag=YPZ3_0698 NC_014029.1 Protein Homology CDS 856021 856887 . + 0 ID=cds811;Parent=gene819;Dbxref=Genbank:WP_002213750.1;Name=WP_002213750.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_002213750.1;transl_table=11 NC_014029.1 RefSeq gene 856887 857798 . + . ID=gene820;Name=YPZ3_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04110;old_locus_tag=YPZ3_0699 NC_014029.1 Protein Homology CDS 856887 857798 . + 0 ID=cds812;Parent=gene820;Dbxref=Genbank:WP_002211411.1;Name=WP_002211411.1;gbkey=CDS;product=flagellar motor protein B;protein_id=WP_002211411.1;transl_table=11 NC_014029.1 RefSeq gene 857867 858055 . + . ID=gene821;Name=YPZ3_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04115 NC_014029.1 Protein Homology CDS 857867 858055 . + 0 ID=cds813;Parent=gene821;Dbxref=Genbank:WP_002213749.1;Name=WP_002213749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213749.1;transl_table=11 NC_014029.1 RefSeq gene 858258 858854 . + . ID=gene822;Name=YPZ3_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04120;old_locus_tag=YPZ3_0700 NC_014029.1 Protein Homology CDS 858258 858854 . + 0 ID=cds814;Parent=gene822;Dbxref=Genbank:WP_002211410.1;Name=WP_002211410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211410.1;transl_table=11 NC_014029.1 RefSeq gene 858851 859306 . + . ID=gene823;Name=YPZ3_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04125;old_locus_tag=YPZ3_0701 NC_014029.1 Protein Homology CDS 858851 859306 . + 0 ID=cds815;Parent=gene823;Dbxref=Genbank:WP_002211409.1;Name=WP_002211409.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211409.1;transl_table=11 NC_014029.1 RefSeq gene 859404 859661 . + . ID=gene824;Name=YPZ3_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04130 NC_014029.1 Protein Homology CDS 859404 859661 . + 0 ID=cds816;Parent=gene824;Dbxref=Genbank:WP_002353780.1;Name=WP_002353780.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353780.1;transl_table=11 NC_014029.1 RefSeq gene 859814 860282 . - . ID=gene825;Name=YPZ3_RS04135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS04135;pseudo=true NC_014029.1 Protein Homology CDS 859814 860282 . - 0 ID=cds817;Parent=gene825;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 860532 860834 . - . ID=gene826;Name=YPZ3_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04140 NC_014029.1 Protein Homology CDS 860532 860834 . - 0 ID=cds818;Parent=gene826;Dbxref=Genbank:WP_002213746.1;Name=WP_002213746.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213746.1;transl_table=11 NC_014029.1 RefSeq repeat_region 861380 862822 . + . ID=id60;gbkey=repeat_region NC_014029.1 RefSeq gene 861435 861950 . + . ID=gene827;Name=YPZ3_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04145;old_locus_tag=YPZ3_0702 NC_014029.1 Protein Homology CDS 861435 861950 . + 0 ID=cds819;Parent=gene827;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_014029.1 RefSeq gene 862004 862789 . + . ID=gene828;Name=YPZ3_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04150;old_locus_tag=YPZ3_0703 NC_014029.1 Protein Homology CDS 862004 862789 . + 0 ID=cds820;Parent=gene828;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_014029.1 RefSeq gene 862985 865351 . - . ID=gene829;Name=YPZ3_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04155;old_locus_tag=YPZ3_0704 NC_014029.1 Protein Homology CDS 862985 865351 . - 0 ID=cds821;Parent=gene829;Dbxref=Genbank:WP_002214014.1;Name=WP_002214014.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002214014.1;transl_table=11 NC_014029.1 RefSeq gene 865355 865552 . - . ID=gene830;Name=YPZ3_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04160 NC_014029.1 Protein Homology CDS 865355 865552 . - 0 ID=cds822;Parent=gene830;Dbxref=Genbank:WP_002214016.1;Name=WP_002214016.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214016.1;transl_table=11 NC_014029.1 RefSeq gene 865991 867268 . + . ID=gene831;Name=YPZ3_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04165;old_locus_tag=YPZ3_0705 NC_014029.1 Protein Homology CDS 865991 867268 . + 0 ID=cds823;Parent=gene831;Dbxref=Genbank:WP_002211643.1;Name=WP_002211643.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002211643.1;transl_table=11 NC_014029.1 RefSeq gene 867281 870400 . + . ID=gene832;Name=YPZ3_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04170;old_locus_tag=YPZ3_0706 NC_014029.1 Protein Homology CDS 867281 870400 . + 0 ID=cds824;Parent=gene832;Dbxref=Genbank:WP_002211642.1;Name=WP_002211642.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_002211642.1;transl_table=11 NC_014029.1 RefSeq gene 870535 872025 . - . ID=gene833;Name=YPZ3_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04175;old_locus_tag=YPZ3_0707 NC_014029.1 Protein Homology CDS 870535 872025 . - 0 ID=cds825;Parent=gene833;Dbxref=Genbank:WP_002211641.1;Name=WP_002211641.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002211641.1;transl_table=11 NC_014029.1 RefSeq gene 872303 872890 . + . ID=gene834;Name=YPZ3_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04180;old_locus_tag=YPZ3_0708 NC_014029.1 Protein Homology CDS 872303 872890 . + 0 ID=cds826;Parent=gene834;Dbxref=Genbank:WP_002211640.1;Name=WP_002211640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211640.1;transl_table=11 NC_014029.1 RefSeq gene 873744 884861 . + . ID=gene835;Name=YPZ3_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04185;old_locus_tag=YPZ3_0709 NC_014029.1 Protein Homology CDS 873744 884861 . + 0 ID=cds827;Parent=gene835;Dbxref=Genbank:WP_002211638.1;Name=WP_002211638.1;gbkey=CDS;product=autotransporter;protein_id=WP_002211638.1;transl_table=11 NC_014029.1 RefSeq repeat_region 876975 877303 . + . ID=id61;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 877633 878261 . + . ID=id62;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 878782 879167 . + . ID=id63;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 879492 879947 . + . ID=id64;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 880591 880976 . + . ID=id65;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 881281 881909 . + . ID=id66;gbkey=repeat_region NC_014029.1 RefSeq gene 884964 886844 . - . ID=gene836;Name=YPZ3_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04190;old_locus_tag=YPZ3_0710 NC_014029.1 Protein Homology CDS 884964 886844 . - 0 ID=cds828;Parent=gene836;Dbxref=Genbank:WP_002211637.1;Name=WP_002211637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211637.1;transl_table=11 NC_014029.1 RefSeq repeat_region 886712 886936 . + . ID=id67;gbkey=repeat_region NC_014029.1 RefSeq gene 887407 888282 . - . ID=gene837;Name=YPZ3_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04195;old_locus_tag=YPZ3_0711 NC_014029.1 Protein Homology CDS 887407 888282 . - 0 ID=cds829;Parent=gene837;Dbxref=Genbank:WP_002214025.1;Name=WP_002214025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214025.1;transl_table=11 NC_014029.1 RefSeq gene 888490 890307 . - . ID=gene838;Name=YPZ3_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04200;old_locus_tag=YPZ3_0712 NC_014029.1 Protein Homology CDS 888490 890307 . - 0 ID=cds830;Parent=gene838;Dbxref=Genbank:WP_002211636.1;Name=WP_002211636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211636.1;transl_table=11 NC_014029.1 RefSeq repeat_region 890175 890399 . + . ID=id68;gbkey=repeat_region NC_014029.1 RefSeq gene 891026 892582 . + . ID=gene839;Name=YPZ3_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04205;old_locus_tag=YPZ3_0713 NC_014029.1 Protein Homology CDS 891026 892582 . + 0 ID=cds831;Parent=gene839;Dbxref=Genbank:WP_002211634.1;Name=WP_002211634.1;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=WP_002211634.1;transl_table=11 NC_014029.1 RefSeq gene 892660 893892 . + . ID=gene840;Name=YPZ3_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04210;old_locus_tag=YPZ3_0714 NC_014029.1 Protein Homology CDS 892660 893892 . + 0 ID=cds832;Parent=gene840;Dbxref=Genbank:WP_002211633.1;Name=WP_002211633.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_002211633.1;transl_table=11 NC_014029.1 RefSeq gene 894280 896352 . + . ID=gene841;Name=YPZ3_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04215;old_locus_tag=YPZ3_0715 NC_014029.1 Protein Homology CDS 894280 896352 . + 0 ID=cds833;Parent=gene841;Dbxref=Genbank:WP_002211632.1;Name=WP_002211632.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_002211632.1;transl_table=11 NC_014029.1 RefSeq gene 896503 899915 . + . ID=gene842;Name=YPZ3_RS04220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS04220;old_locus_tag=YPZ3_0716;pseudo=true NC_014029.1 Protein Homology CDS 896503 899915 . + 0 ID=cds834;Parent=gene842;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide synthetase;pseudo=true;transl_table=11 NC_014029.1 RefSeq repeat_region 899841 901800 . + . ID=id69;gbkey=repeat_region NC_014029.1 RefSeq gene 899929 900951 . + . ID=gene843;Name=YPZ3_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04225;old_locus_tag=YPZ3_0718 NC_014029.1 Protein Homology CDS 899929 900951 . + 0 ID=cds835;Parent=gene843;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 900951 901730 . + . ID=gene844;Name=YPZ3_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04230;old_locus_tag=YPZ3_0719 NC_014029.1 Protein Homology CDS 900951 901730 . + 0 ID=cds836;Parent=gene844;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 901938 908396 . + . ID=gene845;Name=YPZ3_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04235;old_locus_tag=YPZ3_0720 NC_014029.1 Protein Homology CDS 901938 908396 . + 0 ID=cds837;Parent=gene845;Dbxref=Genbank:WP_002211387.1;Name=WP_002211387.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002211387.1;transl_table=11 NC_014029.1 RefSeq gene 908404 910092 . + . ID=gene846;Name=YPZ3_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04240;old_locus_tag=YPZ3_0721 NC_014029.1 Protein Homology CDS 908404 910092 . + 0 ID=cds838;Parent=gene846;Dbxref=Genbank:WP_002214915.1;Name=WP_002214915.1;gbkey=CDS;product=high molecular weight siderophore biosynthesis protein;protein_id=WP_002214915.1;transl_table=11 NC_014029.1 RefSeq gene 910105 915924 . + . ID=gene847;Name=YPZ3_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04245;old_locus_tag=YPZ3_0722 NC_014029.1 Protein Homology CDS 910105 915924 . + 0 ID=cds839;Parent=gene847;Dbxref=Genbank:WP_002211388.1;Name=WP_002211388.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002211388.1;transl_table=11 NC_014029.1 RefSeq gene 915921 916997 . + . ID=gene848;Name=YPZ3_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04250;old_locus_tag=YPZ3_0723 NC_014029.1 Protein Homology CDS 915921 916997 . + 0 ID=cds840;Parent=gene848;Dbxref=Genbank:WP_002211389.1;Name=WP_002211389.1;gbkey=CDS;product=saccharopine dehydrogenase;protein_id=WP_002211389.1;transl_table=11 NC_014029.1 RefSeq gene 916994 918121 . + . ID=gene849;Name=YPZ3_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04255;old_locus_tag=YPZ3_0724 NC_014029.1 Protein Homology CDS 916994 918121 . + 0 ID=cds841;Parent=gene849;Dbxref=Genbank:WP_002211390.1;Name=WP_002211390.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_002211390.1;transl_table=11 NC_014029.1 RefSeq gene 918114 918878 . + . ID=gene850;Name=YPZ3_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04260;old_locus_tag=YPZ3_0725 NC_014029.1 Protein Homology CDS 918114 918878 . + 0 ID=cds842;Parent=gene850;Dbxref=Genbank:WP_002214925.1;Name=WP_002214925.1;gbkey=CDS;product=thioesterase;protein_id=WP_002214925.1;transl_table=11 NC_014029.1 RefSeq gene 918868 920172 . + . ID=gene851;Name=YPZ3_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04265;old_locus_tag=YPZ3_0726 NC_014029.1 Protein Homology CDS 918868 920172 . + 0 ID=cds843;Parent=gene851;Dbxref=Genbank:WP_002211392.1;Name=WP_002211392.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211392.1;transl_table=11 NC_014029.1 RefSeq gene 920172 921944 . + . ID=gene852;Name=YPZ3_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04270;old_locus_tag=YPZ3_0727 NC_014029.1 Protein Homology CDS 920172 921944 . + 0 ID=cds844;Parent=gene852;Dbxref=Genbank:WP_002214927.1;Name=WP_002214927.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_002214927.1;transl_table=11 NC_014029.1 RefSeq gene 921937 923694 . + . ID=gene853;Name=YPZ3_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04275;old_locus_tag=YPZ3_0728 NC_014029.1 Protein Homology CDS 921937 923694 . + 0 ID=cds845;Parent=gene853;Dbxref=Genbank:WP_002211394.1;Name=WP_002211394.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_002211394.1;transl_table=11 NC_014029.1 RefSeq gene 924017 924892 . - . ID=gene854;Name=YPZ3_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04280;old_locus_tag=YPZ3_0729 NC_014029.1 Protein Homology CDS 924017 924892 . - 0 ID=cds846;Parent=gene854;Dbxref=Genbank:WP_002211395.1;Name=WP_002211395.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211395.1;transl_table=11 NC_014029.1 RefSeq gene 925328 925726 . - . ID=gene855;Name=YPZ3_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04285;old_locus_tag=YPZ3_0730 NC_014029.1 Protein Homology CDS 925328 925726 . - 0 ID=cds847;Parent=gene855;Dbxref=Genbank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11 NC_014029.1 RefSeq gene 927266 928609 . + . ID=gene856;Name=YPZ3_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04290;old_locus_tag=YPZ3_0731 NC_014029.1 Protein Homology CDS 927266 928609 . + 0 ID=cds848;Parent=gene856;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11 NC_014029.1 RefSeq gene 929610 931268 . + . ID=gene857;Name=YPZ3_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04295;old_locus_tag=YPZ3_0732 NC_014029.1 Protein Homology CDS 929610 931268 . + 0 ID=cds849;Parent=gene857;Dbxref=Genbank:WP_002213742.1;Name=WP_002213742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213742.1;transl_table=11 NC_014029.1 RefSeq repeat_region 931262 933423 . + . ID=id70;gbkey=repeat_region NC_014029.1 RefSeq gene 931373 933373 . + . ID=gene858;Name=YPZ3_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04300;old_locus_tag=YPZ3_0733 NC_014029.1 Protein Homology CDS 931373 933373 . + 0 ID=cds850;Parent=gene858;Dbxref=Genbank:WP_002228666.1;Name=WP_002228666.1;gbkey=CDS;product=adhesin;protein_id=WP_002228666.1;transl_table=11 NC_014029.1 RefSeq gene 934029 937799 . + . ID=gene859;Name=YPZ3_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04305;old_locus_tag=YPZ3_0734 NC_014029.1 Protein Homology CDS 934029 937799 . + 0 ID=cds851;Parent=gene859;Dbxref=Genbank:WP_002211399.1;Name=WP_002211399.1;gbkey=CDS;product=autotransporter;protein_id=WP_002211399.1;transl_table=11 NC_014029.1 RefSeq repeat_region 935688 937849 . + . ID=id71;gbkey=repeat_region NC_014029.1 RefSeq gene 938385 940610 . + . ID=gene860;Name=YPZ3_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04310;old_locus_tag=YPZ3_0735 NC_014029.1 Protein Homology CDS 938385 940610 . + 0 ID=cds852;Parent=gene860;Dbxref=Genbank:WP_002211400.1;Name=WP_002211400.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002211400.1;transl_table=11 NC_014029.1 RefSeq gene 940636 941955 . + . ID=gene861;Name=YPZ3_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04315;old_locus_tag=YPZ3_0736 NC_014029.1 Protein Homology CDS 940636 941955 . + 0 ID=cds853;Parent=gene861;Dbxref=Genbank:WP_002211401.1;Name=WP_002211401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211401.1;transl_table=11 NC_014029.1 RefSeq gene 941969 946285 . + . ID=gene862;Name=YPZ3_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04320;old_locus_tag=YPZ3_0737 NC_014029.1 Protein Homology CDS 941969 946285 . + 0 ID=cds854;Parent=gene862;Dbxref=Genbank:WP_002211402.1;Name=WP_002211402.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002211402.1;transl_table=11 NC_014029.1 RefSeq gene 946560 946802 . + . ID=gene863;Name=YPZ3_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04325 NC_014029.1 Protein Homology CDS 946560 946802 . + 0 ID=cds855;Parent=gene863;Dbxref=Genbank:WP_002211403.1;Name=WP_002211403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211403.1;transl_table=11 NC_014029.1 RefSeq gene 947346 947759 . + . ID=gene864;Name=YPZ3_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04330;old_locus_tag=YPZ3_0738 NC_014029.1 Protein Homology CDS 947346 947759 . + 0 ID=cds856;Parent=gene864;Dbxref=Genbank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211404.1;transl_table=11 NC_014029.1 RefSeq gene 947939 949309 . - . ID=gene865;Name=YPZ3_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04335;old_locus_tag=YPZ3_0739 NC_014029.1 Protein Homology CDS 947939 949309 . - 0 ID=cds857;Parent=gene865;Dbxref=Genbank:WP_002211405.1;Name=WP_002211405.1;gbkey=CDS;product=transporter divalent anion:Na+ symporter (DASS) family;protein_id=WP_002211405.1;transl_table=11 NC_014029.1 RefSeq gene 949591 950610 . - . ID=gene866;Name=YPZ3_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04340;old_locus_tag=YPZ3_0740 NC_014029.1 Protein Homology CDS 949591 950610 . - 0 ID=cds858;Parent=gene866;Dbxref=Genbank:WP_002211406.1;Name=WP_002211406.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211406.1;transl_table=11 NC_014029.1 RefSeq gene 950904 952067 . + . ID=gene867;Name=YPZ3_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04345 NC_014029.1 Protein Homology CDS 950904 952067 . + 0 ID=cds859;Parent=gene867;Dbxref=Genbank:WP_002211407.1;Name=WP_002211407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211407.1;transl_table=11 NC_014029.1 RefSeq repeat_region 951920 953366 . + . ID=id72;gbkey=repeat_region NC_014029.1 RefSeq gene 952144 952742 . - . ID=gene868;Name=YPZ3_RS04350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS04350;pseudo=true NC_014029.1 Protein Homology CDS 952144 952742 . - 0 ID=cds860;Parent=gene868;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 952796 953419 . - . ID=gene869;Name=YPZ3_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04355 NC_014029.1 Protein Homology CDS 952796 953419 . - 0 ID=cds861;Parent=gene869;Dbxref=Genbank:WP_042468771.1;Name=WP_042468771.1;gbkey=CDS;product=transposase;protein_id=WP_042468771.1;transl_table=11 NC_014029.1 RefSeq gene 953583 955007 . + . ID=gene870;Name=YPZ3_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04360;old_locus_tag=YPZ3_0743 NC_014029.1 Protein Homology CDS 953583 955007 . + 0 ID=cds862;Parent=gene870;Dbxref=Genbank:WP_002211645.1;Name=WP_002211645.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_002211645.1;transl_table=11 NC_014029.1 RefSeq gene 955266 957446 . - . ID=gene871;Name=YPZ3_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04365;old_locus_tag=YPZ3_0744 NC_014029.1 Protein Homology CDS 955266 957446 . - 0 ID=cds863;Parent=gene871;Dbxref=Genbank:WP_002211646.1;Name=WP_002211646.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002211646.1;transl_table=11 NC_014029.1 RefSeq gene 957518 958846 . - . ID=gene872;Name=YPZ3_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04370;old_locus_tag=YPZ3_0745 NC_014029.1 Protein Homology CDS 957518 958846 . - 0 ID=cds864;Parent=gene872;Dbxref=Genbank:WP_002211647.1;Name=WP_002211647.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_002211647.1;transl_table=11 NC_014029.1 RefSeq gene 958843 960591 . - . ID=gene873;Name=YPZ3_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04375;old_locus_tag=YPZ3_0746 NC_014029.1 Protein Homology CDS 958843 960591 . - 0 ID=cds865;Parent=gene873;Dbxref=Genbank:WP_002211648.1;Name=WP_002211648.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_002211648.1;transl_table=11 NC_014029.1 RefSeq gene 960588 961538 . - . ID=gene874;Name=YPZ3_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04380;old_locus_tag=YPZ3_0747 NC_014029.1 Protein Homology CDS 960588 961538 . - 0 ID=cds866;Parent=gene874;Dbxref=Genbank:WP_002211649.1;Name=WP_002211649.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_002211649.1;transl_table=11 NC_014029.1 RefSeq gene 961522 962592 . - . ID=gene875;Name=YPZ3_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04385;old_locus_tag=YPZ3_0748 NC_014029.1 Protein Homology CDS 961522 962592 . - 0 ID=cds867;Parent=gene875;Dbxref=Genbank:WP_002228662.1;Name=WP_002228662.1;gbkey=CDS;product=aerobactin siderophore biosynthesis proteiniucA;protein_id=WP_002228662.1;transl_table=11 NC_014029.1 RefSeq gene 962685 963293 . - . ID=gene876;Name=YPZ3_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04390;old_locus_tag=YPZ3_0749 NC_014029.1 Protein Homology CDS 962685 963293 . - 0 ID=cds868;Parent=gene876;Dbxref=Genbank:WP_002214005.1;Name=WP_002214005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214005.1;transl_table=11 NC_014029.1 RefSeq gene 963433 964656 . + . ID=gene877;Name=YPZ3_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04395;old_locus_tag=YPZ3_0750 NC_014029.1 Protein Homology CDS 963433 964656 . + 0 ID=cds869;Parent=gene877;Dbxref=Genbank:WP_002211651.1;Name=WP_002211651.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211651.1;transl_table=11 NC_014029.1 RefSeq gene 964946 965779 . - . ID=gene878;Name=YPZ3_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04400;old_locus_tag=YPZ3_0751 NC_014029.1 Protein Homology CDS 964946 965779 . - 0 ID=cds870;Parent=gene878;Dbxref=Genbank:WP_002211652.1;Name=WP_002211652.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002211652.1;transl_table=11 NC_014029.1 RefSeq gene 966156 967532 . - . ID=gene879;Name=YPZ3_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04405;old_locus_tag=YPZ3_0752 NC_014029.1 Protein Homology CDS 966156 967532 . - 0 ID=cds871;Parent=gene879;Dbxref=Genbank:WP_002211654.1;Name=WP_002211654.1;gbkey=CDS;product=peptidase;protein_id=WP_002211654.1;transl_table=11 NC_014029.1 RefSeq gene 968094 968837 . + . ID=gene880;Name=YPZ3_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04410;old_locus_tag=YPZ3_0753 NC_014029.1 Protein Homology CDS 968094 968837 . + 0 ID=cds872;Parent=gene880;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NC_014029.1 RefSeq gene 968818 969468 . - . ID=gene881;Name=YPZ3_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04415;old_locus_tag=YPZ3_0754 NC_014029.1 Protein Homology CDS 968818 969468 . - 0 ID=cds873;Parent=gene881;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NC_014029.1 RefSeq gene 970643 971293 . + . ID=gene882;Name=YPZ3_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04420 NC_014029.1 Protein Homology CDS 970643 971293 . + 0 ID=cds874;Parent=gene882;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11 NC_014029.1 RefSeq gene 971744 972139 . + . ID=gene883;Name=YPZ3_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04425 NC_014029.1 Protein Homology CDS 971744 972139 . + 0 ID=cds875;Parent=gene883;Dbxref=Genbank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11 NC_014029.1 RefSeq gene 972207 972470 . + . ID=gene884;Name=YPZ3_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04430 NC_014029.1 Protein Homology CDS 972207 972470 . + 0 ID=cds876;Parent=gene884;Dbxref=Genbank:WP_002215899.1;Name=WP_002215899.1;gbkey=CDS;product=transposase;protein_id=WP_002215899.1;transl_table=11 NC_014029.1 RefSeq gene 972644 973015 . + . ID=gene885;Name=YPZ3_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04435 NC_014029.1 Protein Homology CDS 972644 973015 . + 0 ID=cds877;Parent=gene885;Dbxref=Genbank:WP_002215898.1;Name=WP_002215898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215898.1;transl_table=11 NC_014029.1 RefSeq gene 973058 973213 . + . ID=gene886;Name=YPZ3_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04440 NC_014029.1 Protein Homology CDS 973058 973213 . + 0 ID=cds878;Parent=gene886;Dbxref=Genbank:WP_002211661.1;Name=WP_002211661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211661.1;transl_table=11 NC_014029.1 RefSeq repeat_region 973988 980862 . + . ID=id73;gbkey=repeat_region NC_014029.1 RefSeq gene 974415 974915 . + . ID=gene887;Name=YPZ3_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04445;old_locus_tag=YPZ3_0756 NC_014029.1 Protein Homology CDS 974415 974915 . + 0 ID=cds879;Parent=gene887;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_014029.1 RefSeq gene 974958 976508 . + . ID=gene888;Name=YPZ3_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04450;old_locus_tag=YPZ3_0757 NC_014029.1 Protein Homology CDS 974958 976508 . + 0 ID=cds880;Parent=gene888;Dbxref=Genbank:WP_002214707.1;Name=WP_002214707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214707.1;transl_table=11 NC_014029.1 RefSeq gene 976520 977872 . + . ID=gene889;Name=YPZ3_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04455;old_locus_tag=YPZ3_0758 NC_014029.1 Protein Homology CDS 976520 977872 . + 0 ID=cds881;Parent=gene889;Dbxref=Genbank:WP_002213011.1;Name=WP_002213011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213011.1;transl_table=11 NC_014029.1 RefSeq gene 977869 978555 . + . ID=gene890;Name=YPZ3_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04460;old_locus_tag=YPZ3_0759 NC_014029.1 Protein Homology CDS 977869 978555 . + 0 ID=cds882;Parent=gene890;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_014029.1 RefSeq gene 978555 980291 . + . ID=gene891;Name=YPZ3_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04465;old_locus_tag=YPZ3_0760 NC_014029.1 Protein Homology CDS 978555 980291 . + 0 ID=cds883;Parent=gene891;Dbxref=Genbank:WP_002228049.1;Name=WP_002228049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228049.1;transl_table=11 NC_014029.1 RefSeq gene 980295 980786 . + . ID=gene892;Name=YPZ3_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04470;old_locus_tag=YPZ3_0761 NC_014029.1 Protein Homology CDS 980295 980786 . + 0 ID=cds884;Parent=gene892;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_014029.1 RefSeq repeat_region 981155 982859 . + . ID=id74;gbkey=repeat_region NC_014029.1 RefSeq gene 981174 983816 . + . ID=gene893;Name=YPZ3_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04475;old_locus_tag=YPZ3_0762 NC_014029.1 Protein Homology CDS 981174 983816 . + 0 ID=cds885;Parent=gene893;Dbxref=Genbank:WP_002211927.1;Name=WP_002211927.1;gbkey=CDS;product=ATPase;protein_id=WP_002211927.1;transl_table=11 NC_014029.1 RefSeq gene 983819 986167 . + . ID=gene894;Name=YPZ3_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04480;old_locus_tag=YPZ3_0763 NC_014029.1 Protein Homology CDS 983819 986167 . + 0 ID=cds886;Parent=gene894;Dbxref=Genbank:WP_002211928.1;Name=WP_002211928.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002211928.1;transl_table=11 NC_014029.1 RefSeq repeat_region 985526 987649 . + . ID=id75;gbkey=repeat_region NC_014029.1 RefSeq gene 986183 988480 . + . ID=gene895;Name=YPZ3_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04485;old_locus_tag=YPZ3_0764 NC_014029.1 Protein Homology CDS 986183 988480 . + 0 ID=cds887;Parent=gene895;Dbxref=Genbank:WP_013060315.1;Name=WP_013060315.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060315.1;transl_table=11 NC_014029.1 RefSeq gene 988467 989234 . + . ID=gene896;Name=YPZ3_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04490;old_locus_tag=YPZ3_0765 NC_014029.1 Protein Homology CDS 988467 989234 . + 0 ID=cds888;Parent=gene896;Dbxref=Genbank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11 NC_014029.1 RefSeq repeat_region 989269 989903 . + . ID=id76;gbkey=repeat_region NC_014029.1 RefSeq gene 989483 989605 . + . ID=gene897;Name=YPZ3_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04495 NC_014029.1 Protein Homology CDS 989483 989605 . + 0 ID=cds889;Parent=gene897;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NC_014029.1 RefSeq gene 989659 990027 . + . ID=gene898;Name=YPZ3_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04500;old_locus_tag=YPZ3_0766 NC_014029.1 Protein Homology CDS 989659 990027 . + 0 ID=cds890;Parent=gene898;Dbxref=Genbank:WP_002263919.1;Name=WP_002263919.1;gbkey=CDS;product=transposase;protein_id=WP_002263919.1;transl_table=11 NC_014029.1 RefSeq repeat_region 990025 991234 . + . ID=id77;gbkey=repeat_region NC_014029.1 RefSeq gene 990635 991270 . + . ID=gene899;Name=YPZ3_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04505;old_locus_tag=YPZ3_0767 NC_014029.1 Protein Homology CDS 990635 991270 . + 0 ID=cds891;Parent=gene899;Dbxref=Genbank:WP_002210005.1;Name=WP_002210005.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210005.1;transl_table=11 NC_014029.1 RefSeq gene 991456 991602 . + . ID=gene900;Name=YPZ3_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04510 NC_014029.1 Protein Homology CDS 991456 991602 . + 0 ID=cds892;Parent=gene900;Dbxref=Genbank:WP_002210004.1;Name=WP_002210004.1;gbkey=CDS;product=integrase;protein_id=WP_002210004.1;transl_table=11 NC_014029.1 RefSeq repeat_region 991854 991953 . + . ID=id78;gbkey=repeat_region NC_014029.1 RefSeq gene 991855 991930 . - . ID=gene901;Name=YPZ3_RS04515;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS04515;old_locus_tag=YPZ3_t6 NC_014029.1 tRNAscan-SE tRNA 991855 991930 . - . ID=rna8;Parent=gene901;anticodon=(pos:complement(991895..991897));gbkey=tRNA;product=tRNA-Phe NC_014029.1 tRNAscan-SE exon 991855 991930 . - . ID=id79;Parent=rna8;anticodon=(pos:complement(991895..991897));gbkey=tRNA;product=tRNA-Phe NC_014029.1 RefSeq gene 992599 994761 . + . ID=gene902;Name=YPZ3_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04520;old_locus_tag=YPZ3_0768 NC_014029.1 Protein Homology CDS 992599 994761 . + 0 ID=cds893;Parent=gene902;Dbxref=Genbank:WP_002210002.1;Name=WP_002210002.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_002210002.1;transl_table=11 NC_014029.1 RefSeq gene 995317 996276 . + . ID=gene903;Name=YPZ3_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04525;old_locus_tag=YPZ3_0769 NC_014029.1 Protein Homology CDS 995317 996276 . + 0 ID=cds894;Parent=gene903;Dbxref=Genbank:WP_002210001.1;Name=WP_002210001.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210001.1;transl_table=11 NC_014029.1 RefSeq gene 996322 997821 . + . ID=gene904;Name=YPZ3_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04530;old_locus_tag=YPZ3_0770 NC_014029.1 Protein Homology CDS 996322 997821 . + 0 ID=cds895;Parent=gene904;Dbxref=Genbank:WP_002210000.1;Name=WP_002210000.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_002210000.1;transl_table=11 NC_014029.1 RefSeq gene 997902 998837 . + . ID=gene905;Name=YPZ3_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04535;old_locus_tag=YPZ3_0771 NC_014029.1 Protein Homology CDS 997902 998837 . + 0 ID=cds896;Parent=gene905;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11 NC_014029.1 RefSeq gene 998920 1000953 . - . ID=gene906;Name=YPZ3_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04540;old_locus_tag=YPZ3_0772 NC_014029.1 Protein Homology CDS 998920 1000953 . - 0 ID=cds897;Parent=gene906;Dbxref=Genbank:WP_002209998.1;Name=WP_002209998.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209998.1;transl_table=11 NC_014029.1 RefSeq gene 1001057 1002157 . - . ID=gene907;Name=YPZ3_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04545;old_locus_tag=YPZ3_0773 NC_014029.1 Protein Homology CDS 1001057 1002157 . - 0 ID=cds898;Parent=gene907;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NC_014029.1 RefSeq gene 1002457 1003533 . - . ID=gene908;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YPZ3_RS04550;old_locus_tag=YPZ3_0774 NC_014029.1 Protein Homology CDS 1002457 1003533 . - 0 ID=cds899;Parent=gene908;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11 NC_014029.1 RefSeq gene 1003716 1003988 . - . ID=gene909;Name=YPZ3_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04555 NC_014029.1 Protein Homology CDS 1003716 1003988 . - 0 ID=cds900;Parent=gene909;Dbxref=Genbank:WP_002209994.1;Name=WP_002209994.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002209994.1;transl_table=11 NC_014029.1 RefSeq gene 1004166 1005281 . - . ID=gene910;Name=YPZ3_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04560;old_locus_tag=YPZ3_0775 NC_014029.1 Protein Homology CDS 1004166 1005281 . - 0 ID=cds901;Parent=gene910;Dbxref=Genbank:WP_002228057.1;Name=WP_002228057.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_002228057.1;transl_table=11 NC_014029.1 RefSeq gene 1005619 1006338 . + . ID=gene911;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=YPZ3_RS04565;old_locus_tag=YPZ3_0776 NC_014029.1 Protein Homology CDS 1005619 1006338 . + 0 ID=cds902;Parent=gene911;Dbxref=Genbank:WP_002209991.1;Name=WP_002209991.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_002209991.1;transl_table=11 NC_014029.1 RefSeq gene 1006338 1006664 . + . ID=gene912;Name=YPZ3_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04570;old_locus_tag=YPZ3_0777 NC_014029.1 Protein Homology CDS 1006338 1006664 . + 0 ID=cds903;Parent=gene912;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11 NC_014029.1 RefSeq gene 1006775 1007701 . + . ID=gene913;Name=YPZ3_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04575;old_locus_tag=YPZ3_0778 NC_014029.1 Protein Homology CDS 1006775 1007701 . + 0 ID=cds904;Parent=gene913;Dbxref=Genbank:WP_002209989.1;Name=WP_002209989.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002209989.1;transl_table=11 NC_014029.1 RefSeq gene 1007813 1008343 . + . ID=gene914;Name=YPZ3_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04580;old_locus_tag=YPZ3_0779 NC_014029.1 Protein Homology CDS 1007813 1008343 . + 0 ID=cds905;Parent=gene914;Dbxref=Genbank:WP_002228656.1;Name=WP_002228656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228656.1;transl_table=11 NC_014029.1 RefSeq gene 1008316 1008546 . + . ID=gene915;Name=YPZ3_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04585 NC_014029.1 Protein Homology CDS 1008316 1008546 . + 0 ID=cds906;Parent=gene915;Dbxref=Genbank:WP_002228655.1;Name=WP_002228655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228655.1;transl_table=11 NC_014029.1 RefSeq gene 1009046 1018378 . + . ID=gene916;Name=YPZ3_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04590;old_locus_tag=YPZ3_0780 NC_014029.1 Protein Homology CDS 1009046 1018378 . + 0 ID=cds907;Parent=gene916;Dbxref=Genbank:WP_002224905.1;Name=WP_002224905.1;gbkey=CDS;product=phage minor structural protein;protein_id=WP_002224905.1;transl_table=11 NC_014029.1 RefSeq gene 1018568 1019698 . - . ID=gene917;Name=YPZ3_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04595;old_locus_tag=YPZ3_0781 NC_014029.1 Protein Homology CDS 1018568 1019698 . - 0 ID=cds908;Parent=gene917;Dbxref=Genbank:WP_002209987.1;Name=WP_002209987.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002209987.1;transl_table=11 NC_014029.1 RefSeq gene 1019691 1020284 . - . ID=gene918;Name=YPZ3_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04600;old_locus_tag=YPZ3_0782 NC_014029.1 Protein Homology CDS 1019691 1020284 . - 0 ID=cds909;Parent=gene918;Dbxref=Genbank:WP_002215614.1;Name=WP_002215614.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_002215614.1;transl_table=11 NC_014029.1 RefSeq gene 1020384 1020674 . - . ID=gene919;Name=YPZ3_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04605;old_locus_tag=YPZ3_0783 NC_014029.1 Protein Homology CDS 1020384 1020674 . - 0 ID=cds910;Parent=gene919;Dbxref=Genbank:WP_002215612.1;Name=WP_002215612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215612.1;transl_table=11 NC_014029.1 RefSeq gene 1020671 1021225 . - . ID=gene920;Name=YPZ3_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04610;old_locus_tag=YPZ3_0784 NC_014029.1 Protein Homology CDS 1020671 1021225 . - 0 ID=cds911;Parent=gene920;Dbxref=Genbank:WP_002209984.1;Name=WP_002209984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209984.1;transl_table=11 NC_014029.1 RefSeq gene 1021513 1022334 . - . ID=gene921;Name=YPZ3_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04615;old_locus_tag=YPZ3_0785 NC_014029.1 Protein Homology CDS 1021513 1022334 . - 0 ID=cds912;Parent=gene921;Dbxref=Genbank:WP_002209983.1;Name=WP_002209983.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_002209983.1;transl_table=11 NC_014029.1 RefSeq gene 1022467 1023165 . - . ID=gene922;Name=YPZ3_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04620;old_locus_tag=YPZ3_0786 NC_014029.1 Protein Homology CDS 1022467 1023165 . - 0 ID=cds913;Parent=gene922;Dbxref=Genbank:WP_002215609.1;Name=WP_002215609.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_002215609.1;transl_table=11 NC_014029.1 RefSeq gene 1023185 1024309 . + . ID=gene923;Name=YPZ3_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04625;old_locus_tag=YPZ3_0787 NC_014029.1 Protein Homology CDS 1023185 1024309 . + 0 ID=cds914;Parent=gene923;Dbxref=Genbank:WP_002209981.1;Name=WP_002209981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209981.1;transl_table=11 NC_014029.1 RefSeq gene 1024418 1025533 . - . ID=gene924;Name=YPZ3_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04630;old_locus_tag=YPZ3_0788 NC_014029.1 Protein Homology CDS 1024418 1025533 . - 0 ID=cds915;Parent=gene924;Dbxref=Genbank:WP_002209980.1;Name=WP_002209980.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11 NC_014029.1 RefSeq gene 1025537 1026421 . - . ID=gene925;Name=YPZ3_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04635;old_locus_tag=YPZ3_0789 NC_014029.1 Protein Homology CDS 1025537 1026421 . - 0 ID=cds916;Parent=gene925;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NC_014029.1 RefSeq gene 1026601 1027023 . - . ID=gene926;Name=YPZ3_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04640;old_locus_tag=YPZ3_0790 NC_014029.1 Protein Homology CDS 1026601 1027023 . - 0 ID=cds917;Parent=gene926;Dbxref=Genbank:WP_002209978.1;Name=WP_002209978.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_002209978.1;transl_table=11 NC_014029.1 RefSeq gene 1027023 1027586 . - . ID=gene927;Name=YPZ3_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04645;old_locus_tag=YPZ3_0791 NC_014029.1 Protein Homology CDS 1027023 1027586 . - 0 ID=cds918;Parent=gene927;Dbxref=Genbank:WP_002209977.1;Name=WP_002209977.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209977.1;transl_table=11 NC_014029.1 RefSeq gene 1027702 1028661 . - . ID=gene928;Name=YPZ3_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04650;old_locus_tag=YPZ3_0792 NC_014029.1 Protein Homology CDS 1027702 1028661 . - 0 ID=cds919;Parent=gene928;Dbxref=Genbank:WP_002209976.1;Name=WP_002209976.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_002209976.1;transl_table=11 NC_014029.1 RefSeq gene 1028687 1029418 . - . ID=gene929;Name=YPZ3_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04655;old_locus_tag=YPZ3_0793 NC_014029.1 Protein Homology CDS 1028687 1029418 . - 0 ID=cds920;Parent=gene929;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11 NC_014029.1 RefSeq gene 1029670 1030377 . - . ID=gene930;Name=YPZ3_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04660;old_locus_tag=YPZ3_0794 NC_014029.1 Protein Homology CDS 1029670 1030377 . - 0 ID=cds921;Parent=gene930;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11 NC_014029.1 RefSeq gene 1030475 1030987 . - . ID=gene931;Name=YPZ3_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04665;old_locus_tag=YPZ3_0795 NC_014029.1 Protein Homology CDS 1030475 1030987 . - 0 ID=cds922;Parent=gene931;Dbxref=Genbank:WP_002228653.1;Name=WP_002228653.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_002228653.1;transl_table=11 NC_014029.1 RefSeq gene 1031180 1032334 . - . ID=gene932;Name=YPZ3_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04670;old_locus_tag=YPZ3_0796 NC_014029.1 Protein Homology CDS 1031180 1032334 . - 0 ID=cds923;Parent=gene932;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11 NC_014029.1 RefSeq gene 1033541 1035520 . + . ID=gene933;Name=YPZ3_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04675;old_locus_tag=YPZ3_0797 NC_014029.1 Protein Homology CDS 1033541 1035520 . + 0 ID=cds924;Parent=gene933;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NC_014029.1 RefSeq gene 1035680 1036000 . + . ID=gene934;Name=YPZ3_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04680;old_locus_tag=YPZ3_0798 NC_014029.1 Protein Homology CDS 1035680 1036000 . + 0 ID=cds925;Parent=gene934;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1036073 1036243 . + . ID=id80;gbkey=repeat_region NC_014029.1 RefSeq gene 1036290 1037042 . - . ID=gene935;Name=YPZ3_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04685;old_locus_tag=YPZ3_0799 NC_014029.1 Protein Homology CDS 1036290 1037042 . - 0 ID=cds926;Parent=gene935;Dbxref=Genbank:WP_002209967.1;Name=WP_002209967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209967.1;transl_table=11 NC_014029.1 RefSeq gene 1037533 1039527 . + . ID=gene936;Name=YPZ3_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04690;old_locus_tag=YPZ3_0800 NC_014029.1 Protein Homology CDS 1037533 1039527 . + 0 ID=cds927;Parent=gene936;Dbxref=Genbank:WP_002209965.1;Name=WP_002209965.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_002209965.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1039683 1040404 . + . ID=id81;gbkey=repeat_region NC_014029.1 RefSeq gene 1039835 1040293 . + . ID=gene937;Name=YPZ3_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04695;old_locus_tag=YPZ3_0801 NC_014029.1 Protein Homology CDS 1039835 1040293 . + 0 ID=cds928;Parent=gene937;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1040634 1041650 . + . ID=gene938;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YPZ3_RS04700;old_locus_tag=YPZ3_0802 NC_014029.1 Protein Homology CDS 1040634 1041650 . + 0 ID=cds929;Parent=gene938;Dbxref=Genbank:WP_002209964.1;Name=WP_002209964.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NC_014029.1 RefSeq gene 1041753 1042916 . + . ID=gene939;Name=YPZ3_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04705;old_locus_tag=YPZ3_0803 NC_014029.1 Protein Homology CDS 1041753 1042916 . + 0 ID=cds930;Parent=gene939;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NC_014029.1 RefSeq gene 1043036 1044115 . + . ID=gene940;Name=YPZ3_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04710;old_locus_tag=YPZ3_0804 NC_014029.1 Protein Homology CDS 1043036 1044115 . + 0 ID=cds931;Parent=gene940;Dbxref=Genbank:WP_002209962.1;Name=WP_002209962.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NC_014029.1 RefSeq gene 1044147 1044437 . - . ID=gene941;Name=YPZ3_RS04715;gbkey=Gene;gene_biotype=other;locus_tag=YPZ3_RS04715 NC_014029.1 RefSeq repeat_region 1044155 1044329 . + . ID=id82;gbkey=repeat_region NC_014029.1 RefSeq gene 1044553 1045422 . + . ID=gene942;Name=YPZ3_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04720;old_locus_tag=YPZ3_0805 NC_014029.1 Protein Homology CDS 1044553 1045422 . + 0 ID=cds932;Parent=gene942;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11 NC_014029.1 RefSeq gene 1045685 1046302 . + . ID=gene943;Name=YPZ3_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04725;old_locus_tag=YPZ3_0806 NC_014029.1 Protein Homology CDS 1045685 1046302 . + 0 ID=cds933;Parent=gene943;Dbxref=Genbank:WP_002209960.1;Name=WP_002209960.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein ArgO;protein_id=WP_002209960.1;transl_table=11 NC_014029.1 RefSeq gene 1046492 1047271 . + . ID=gene944;Name=YPZ3_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04730;old_locus_tag=YPZ3_0807 NC_014029.1 Protein Homology CDS 1046492 1047271 . + 0 ID=cds934;Parent=gene944;Dbxref=Genbank:WP_002209959.1;Name=WP_002209959.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209959.1;transl_table=11 NC_014029.1 RefSeq gene 1047282 1048190 . - . ID=gene945;Name=YPZ3_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04735;old_locus_tag=YPZ3_0808 NC_014029.1 Protein Homology CDS 1047282 1048190 . - 0 ID=cds935;Parent=gene945;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11 NC_014029.1 RefSeq gene 1048532 1049188 . + . ID=gene946;Name=YPZ3_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04740;old_locus_tag=YPZ3_0809 NC_014029.1 Protein Homology CDS 1048532 1049188 . + 0 ID=cds936;Parent=gene946;Dbxref=Genbank:WP_002209957.1;Name=WP_002209957.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A 1;protein_id=WP_002209957.1;transl_table=11 NC_014029.1 RefSeq gene 1049495 1050736 . + . ID=gene947;Name=YPZ3_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04745;old_locus_tag=YPZ3_0810 NC_014029.1 Protein Homology CDS 1049495 1050736 . + 0 ID=cds937;Parent=gene947;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1050778 1050950 . + . ID=id83;gbkey=repeat_region NC_014029.1 RefSeq gene 1051001 1051597 . - . ID=gene948;Name=YPZ3_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04750;old_locus_tag=YPZ3_0811 NC_014029.1 Protein Homology CDS 1051001 1051597 . - 0 ID=cds938;Parent=gene948;Dbxref=Genbank:WP_002209955.1;Name=WP_002209955.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002209955.1;transl_table=11 NC_014029.1 RefSeq gene 1051961 1052290 . - . ID=gene949;Name=YPZ3_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04755;old_locus_tag=YPZ3_0812 NC_014029.1 Protein Homology CDS 1051961 1052290 . - 0 ID=cds939;Parent=gene949;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NC_014029.1 RefSeq gene 1052627 1053205 . + . ID=gene950;Name=YPZ3_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04760;old_locus_tag=YPZ3_0813 NC_014029.1 Protein Homology CDS 1052627 1053205 . + 0 ID=cds940;Parent=gene950;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11 NC_014029.1 RefSeq gene 1053293 1054606 . + . ID=gene951;Name=YPZ3_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04765;old_locus_tag=YPZ3_0814 NC_014029.1 Protein Homology CDS 1053293 1054606 . + 0 ID=cds941;Parent=gene951;Dbxref=Genbank:WP_002209952.1;Name=WP_002209952.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_002209952.1;transl_table=11 NC_014029.1 RefSeq gene 1054675 1055853 . + . ID=gene952;Name=YPZ3_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04770;old_locus_tag=YPZ3_0815 NC_014029.1 Protein Homology CDS 1054675 1055853 . + 0 ID=cds942;Parent=gene952;Dbxref=Genbank:WP_002209951.1;Name=WP_002209951.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209951.1;transl_table=11 NC_014029.1 RefSeq gene 1056026 1057246 . + . ID=gene953;Name=YPZ3_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04775;old_locus_tag=YPZ3_0816 NC_014029.1 Protein Homology CDS 1056026 1057246 . + 0 ID=cds943;Parent=gene953;Dbxref=Genbank:WP_002209950.1;Name=WP_002209950.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209950.1;transl_table=11 NC_014029.1 RefSeq gene 1057967 1059064 . + . ID=gene954;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YPZ3_RS04780;old_locus_tag=YPZ3_0817 NC_014029.1 Protein Homology CDS 1057967 1059064 . + 0 ID=cds944;Parent=gene954;Dbxref=Genbank:WP_002209949.1;Name=WP_002209949.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_002209949.1;transl_table=11 NC_014029.1 RefSeq gene 1059133 1059519 . + . ID=gene955;Name=YPZ3_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04785;old_locus_tag=YPZ3_0818 NC_014029.1 Protein Homology CDS 1059133 1059519 . + 0 ID=cds945;Parent=gene955;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11 NC_014029.1 RefSeq gene 1059731 1062610 . + . ID=gene956;Name=YPZ3_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04790;old_locus_tag=YPZ3_0819 NC_014029.1 Protein Homology CDS 1059731 1062610 . + 0 ID=cds946;Parent=gene956;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1062644 1062817 . + . ID=id84;gbkey=repeat_region NC_014029.1 RefSeq gene 1062988 1063425 . + . ID=gene957;Name=YPZ3_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04795;old_locus_tag=YPZ3_0820 NC_014029.1 Protein Homology CDS 1062988 1063425 . + 0 ID=cds947;Parent=gene957;Dbxref=Genbank:WP_002209946.1;Name=WP_002209946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209946.1;transl_table=11 NC_014029.1 RefSeq gene 1064486 1064638 . + . ID=gene958;Name=YPZ3_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04800 NC_014029.1 Protein Homology CDS 1064486 1064638 . + 0 ID=cds948;Parent=gene958;Dbxref=Genbank:WP_002209944.1;Name=WP_002209944.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002209944.1;transl_table=11 NC_014029.1 RefSeq gene 1064635 1066611 . + . ID=gene959;Name=YPZ3_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04805;old_locus_tag=YPZ3_0821 NC_014029.1 Protein Homology CDS 1064635 1066611 . + 0 ID=cds949;Parent=gene959;Dbxref=Genbank:WP_002215142.1;Name=WP_002215142.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215142.1;transl_table=11 NC_014029.1 RefSeq gene 1066715 1067818 . + . ID=gene960;Name=YPZ3_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04810;old_locus_tag=YPZ3_0822 NC_014029.1 Protein Homology CDS 1066715 1067818 . + 0 ID=cds950;Parent=gene960;Dbxref=Genbank:WP_002209943.1;Name=WP_002209943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209943.1;transl_table=11 NC_014029.1 RefSeq gene 1068020 1068721 . + . ID=gene961;Name=YPZ3_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04815;old_locus_tag=YPZ3_0823 NC_014029.1 Protein Homology CDS 1068020 1068721 . + 0 ID=cds951;Parent=gene961;Dbxref=Genbank:WP_002209942.1;Name=WP_002209942.1;gbkey=CDS;product=hemolysin III;protein_id=WP_002209942.1;transl_table=11 NC_014029.1 RefSeq gene 1068979 1069476 . + . ID=gene962;Name=YPZ3_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04820;old_locus_tag=YPZ3_0824 NC_014029.1 Protein Homology CDS 1068979 1069476 . + 0 ID=cds952;Parent=gene962;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11 NC_014029.1 RefSeq gene 1069549 1070541 . - . ID=gene963;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YPZ3_RS04825;old_locus_tag=YPZ3_0825 NC_014029.1 Protein Homology CDS 1069549 1070541 . - 0 ID=cds953;Parent=gene963;Dbxref=Genbank:WP_002209940.1;Name=WP_002209940.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_002209940.1;transl_table=11 NC_014029.1 RefSeq gene 1070858 1071124 . + . ID=gene964;Name=YPZ3_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04830 NC_014029.1 Protein Homology CDS 1070858 1071124 . + 0 ID=cds954;Parent=gene964;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11 NC_014029.1 RefSeq gene 1071105 1071530 . + . ID=gene965;Name=YPZ3_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04835;old_locus_tag=YPZ3_0826 NC_014029.1 Protein Homology CDS 1071105 1071530 . + 0 ID=cds955;Parent=gene965;Dbxref=Genbank:WP_002215144.1;Name=WP_002215144.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215144.1;transl_table=11 NC_014029.1 RefSeq gene 1071530 1072228 . + . ID=gene966;Name=YPZ3_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04840;old_locus_tag=YPZ3_0827 NC_014029.1 Protein Homology CDS 1071530 1072228 . + 0 ID=cds956;Parent=gene966;Dbxref=Genbank:WP_002209937.1;Name=WP_002209937.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209937.1;transl_table=11 NC_014029.1 RefSeq gene 1072253 1073671 . + . ID=gene967;Name=YPZ3_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04845;old_locus_tag=YPZ3_0828 NC_014029.1 Protein Homology CDS 1072253 1073671 . + 0 ID=cds957;Parent=gene967;Dbxref=Genbank:WP_002209936.1;Name=WP_002209936.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002209936.1;transl_table=11 NC_014029.1 RefSeq gene 1073792 1075249 . + . ID=gene968;Name=YPZ3_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04850;old_locus_tag=YPZ3_0829 NC_014029.1 Protein Homology CDS 1073792 1075249 . + 0 ID=cds958;Parent=gene968;Dbxref=Genbank:WP_002220113.1;Name=WP_002220113.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220113.1;transl_table=11 NC_014029.1 RefSeq gene 1075339 1075857 . - . ID=gene969;Name=YPZ3_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04855;old_locus_tag=YPZ3_0830 NC_014029.1 Protein Homology CDS 1075339 1075857 . - 0 ID=cds959;Parent=gene969;Dbxref=Genbank:WP_002209934.1;Name=WP_002209934.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_002209934.1;transl_table=11 NC_014029.1 RefSeq gene 1075964 1076863 . + . ID=gene970;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YPZ3_RS04860;old_locus_tag=YPZ3_0831 NC_014029.1 Protein Homology CDS 1075964 1076863 . + 0 ID=cds960;Parent=gene970;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NC_014029.1 RefSeq gene 1076894 1077610 . + . ID=gene971;Name=YPZ3_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04865;old_locus_tag=YPZ3_0832 NC_014029.1 Protein Homology CDS 1076894 1077610 . + 0 ID=cds961;Parent=gene971;Dbxref=Genbank:WP_002209932.1;Name=WP_002209932.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_002209932.1;transl_table=11 NC_014029.1 RefSeq gene 1077617 1079350 . + . ID=gene972;Name=YPZ3_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04870;old_locus_tag=YPZ3_0833 NC_014029.1 Protein Homology CDS 1077617 1079350 . + 0 ID=cds962;Parent=gene972;Dbxref=Genbank:WP_002209931.1;Name=WP_002209931.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NC_014029.1 RefSeq gene 1079695 1080627 . + . ID=gene973;Name=YPZ3_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04875;old_locus_tag=YPZ3_0834 NC_014029.1 Protein Homology CDS 1079695 1080627 . + 0 ID=cds963;Parent=gene973;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11 NC_014029.1 RefSeq gene 1080637 1082154 . + . ID=gene974;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YPZ3_RS04880;old_locus_tag=YPZ3_0835 NC_014029.1 Protein Homology CDS 1080637 1082154 . + 0 ID=cds964;Parent=gene974;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NC_014029.1 RefSeq gene 1082348 1082421 . + . ID=gene975;Name=YPZ3_RS04885;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS04885;old_locus_tag=YPZ3_t7 NC_014029.1 tRNAscan-SE tRNA 1082348 1082421 . + . ID=rna9;Parent=gene975;anticodon=(pos:1082380..1082382);gbkey=tRNA;product=tRNA-Gly NC_014029.1 tRNAscan-SE exon 1082348 1082421 . + . ID=id85;Parent=rna9;anticodon=(pos:1082380..1082382);gbkey=tRNA;product=tRNA-Gly NC_014029.1 RefSeq gene 1082587 1083801 . + . ID=gene976;Name=YPZ3_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04890;old_locus_tag=YPZ3_0836 NC_014029.1 Protein Homology CDS 1082587 1083801 . + 0 ID=cds965;Parent=gene976;Dbxref=Genbank:WP_002209929.1;Name=WP_002209929.1;gbkey=CDS;product=integrase;protein_id=WP_002209929.1;transl_table=11 NC_014029.1 RefSeq gene 1083883 1084068 . - . ID=gene977;Name=YPZ3_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04895 NC_014029.1 Protein Homology CDS 1083883 1084068 . - 0 ID=cds966;Parent=gene977;Dbxref=Genbank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11 NC_014029.1 RefSeq gene 1084169 1084294 . - . ID=gene978;Name=YPZ3_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04900 NC_014029.1 Protein Homology CDS 1084169 1084294 . - 0 ID=cds967;Parent=gene978;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11 NC_014029.1 RefSeq gene 1084666 1084926 . + . ID=gene979;Name=YPZ3_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04905 NC_014029.1 Protein Homology CDS 1084666 1084926 . + 0 ID=cds968;Parent=gene979;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11 NC_014029.1 RefSeq gene 1084989 1085351 . + . ID=gene980;Name=YPZ3_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04910;old_locus_tag=YPZ3_0837 NC_014029.1 Protein Homology CDS 1084989 1085351 . + 0 ID=cds969;Parent=gene980;Dbxref=Genbank:WP_002209925.1;Name=WP_002209925.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209925.1;transl_table=11 NC_014029.1 RefSeq gene 1085515 1085811 . + . ID=gene981;Name=YPZ3_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04915 NC_014029.1 Protein Homology CDS 1085515 1085811 . + 0 ID=cds970;Parent=gene981;Dbxref=Genbank:WP_002214787.1;Name=WP_002214787.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214787.1;transl_table=11 NC_014029.1 RefSeq gene 1085811 1086209 . + . ID=gene982;Name=YPZ3_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04920;old_locus_tag=YPZ3_0838 NC_014029.1 Protein Homology CDS 1085811 1086209 . + 0 ID=cds971;Parent=gene982;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11 NC_014029.1 RefSeq gene 1086609 1088900 . - . ID=gene983;Name=YPZ3_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04925;old_locus_tag=YPZ3_0839 NC_014029.1 Protein Homology CDS 1086609 1088900 . - 0 ID=cds972;Parent=gene983;Dbxref=Genbank:WP_002209923.1;Name=WP_002209923.1;gbkey=CDS;product=DNA primase;protein_id=WP_002209923.1;transl_table=11 NC_014029.1 RefSeq gene 1089200 1089526 . + . ID=gene984;Name=YPZ3_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04930;old_locus_tag=YPZ3_0840 NC_014029.1 Protein Homology CDS 1089200 1089526 . + 0 ID=cds973;Parent=gene984;Dbxref=Genbank:WP_002209922.1;Name=WP_002209922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209922.1;transl_table=11 NC_014029.1 RefSeq gene 1089519 1089671 . + . ID=gene985;Name=YPZ3_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04935 NC_014029.1 Protein Homology CDS 1089519 1089671 . + 0 ID=cds974;Parent=gene985;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NC_014029.1 RefSeq gene 1089685 1089885 . - . ID=gene986;Name=YPZ3_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04940 NC_014029.1 Protein Homology CDS 1089685 1089885 . - 0 ID=cds975;Parent=gene986;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11 NC_014029.1 RefSeq gene 1090067 1090399 . - . ID=gene987;Name=YPZ3_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04945;old_locus_tag=YPZ3_0841 NC_014029.1 Protein Homology CDS 1090067 1090399 . - 0 ID=cds976;Parent=gene987;Dbxref=Genbank:WP_002214791.1;Name=WP_002214791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214791.1;transl_table=11 NC_014029.1 RefSeq gene 1090405 1090641 . - . ID=gene988;Name=YPZ3_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04950 NC_014029.1 Protein Homology CDS 1090405 1090641 . - 0 ID=cds977;Parent=gene988;Dbxref=Genbank:WP_002214792.1;Name=WP_002214792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214792.1;transl_table=11 NC_014029.1 RefSeq gene 1090654 1091019 . - . ID=gene989;Name=YPZ3_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04955;old_locus_tag=YPZ3_0842 NC_014029.1 Protein Homology CDS 1090654 1091019 . - 0 ID=cds978;Parent=gene989;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NC_014029.1 RefSeq gene 1091288 1092430 . + . ID=gene990;Name=YPZ3_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04960;old_locus_tag=YPZ3_0843 NC_014029.1 Protein Homology CDS 1091288 1092430 . + 0 ID=cds979;Parent=gene990;Dbxref=Genbank:WP_002209918.1;Name=WP_002209918.1;gbkey=CDS;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11 NC_014029.1 RefSeq gene 1092937 1094475 . + . ID=gene991;Name=YPZ3_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04965;old_locus_tag=YPZ3_0844 NC_014029.1 Protein Homology CDS 1092937 1094475 . + 0 ID=cds980;Parent=gene991;Dbxref=Genbank:WP_002214794.1;Name=WP_002214794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214794.1;transl_table=11 NC_014029.1 RefSeq gene 1094472 1094666 . + . ID=gene992;Name=YPZ3_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04970 NC_014029.1 Protein Homology CDS 1094472 1094666 . + 0 ID=cds981;Parent=gene992;Dbxref=Genbank:WP_002214795.1;Name=WP_002214795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214795.1;transl_table=11 NC_014029.1 RefSeq gene 1095039 1095242 . + . ID=gene993;Name=YPZ3_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04975 NC_014029.1 Protein Homology CDS 1095039 1095242 . + 0 ID=cds982;Parent=gene993;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NC_014029.1 RefSeq gene 1095289 1095573 . + . ID=gene994;Name=YPZ3_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04980 NC_014029.1 Protein Homology CDS 1095289 1095573 . + 0 ID=cds983;Parent=gene994;Dbxref=Genbank:WP_002214798.1;Name=WP_002214798.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_002214798.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1095383 1095746 . + . ID=id86;gbkey=repeat_region NC_014029.1 RefSeq gene 1095983 1098142 . + . ID=gene995;Name=YPZ3_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04985;old_locus_tag=YPZ3_0845 NC_014029.1 Protein Homology CDS 1095983 1098142 . + 0 ID=cds984;Parent=gene995;Dbxref=Genbank:WP_002209914.1;Name=WP_002209914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209914.1;transl_table=11 NC_014029.1 RefSeq gene 1098112 1098879 . + . ID=gene996;Name=YPZ3_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04990;old_locus_tag=YPZ3_0846 NC_014029.1 Protein Homology CDS 1098112 1098879 . + 0 ID=cds985;Parent=gene996;Dbxref=Genbank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209913.1;transl_table=11 NC_014029.1 RefSeq gene 1099191 1099403 . + . ID=gene997;Name=YPZ3_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS04995 NC_014029.1 Protein Homology CDS 1099191 1099403 . + 0 ID=cds986;Parent=gene997;Dbxref=Genbank:WP_002214799.1;Name=WP_002214799.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214799.1;transl_table=11 NC_014029.1 RefSeq gene 1099484 1100263 . + . ID=gene998;Name=YPZ3_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05000;old_locus_tag=YPZ3_0847 NC_014029.1 Protein Homology CDS 1099484 1100263 . + 0 ID=cds987;Parent=gene998;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11 NC_014029.1 RefSeq gene 1100519 1100785 . + . ID=gene999;Name=YPZ3_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05005;old_locus_tag=YPZ3_0848 NC_014029.1 Protein Homology CDS 1100519 1100785 . + 0 ID=cds988;Parent=gene999;Dbxref=Genbank:WP_002209911.1;Name=WP_002209911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209911.1;transl_table=11 NC_014029.1 RefSeq gene 1100868 1101188 . - . ID=gene1000;Name=YPZ3_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05010;old_locus_tag=YPZ3_0849 NC_014029.1 Protein Homology CDS 1100868 1101188 . - 0 ID=cds989;Parent=gene1000;Dbxref=Genbank:WP_002209910.1;Name=WP_002209910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209910.1;transl_table=11 NC_014029.1 RefSeq gene 1101188 1101868 . - . ID=gene1001;Name=YPZ3_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05015;old_locus_tag=YPZ3_0850 NC_014029.1 Protein Homology CDS 1101188 1101868 . - 0 ID=cds990;Parent=gene1001;Dbxref=Genbank:WP_002209909.1;Name=WP_002209909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_002209909.1;transl_table=11 NC_014029.1 RefSeq gene 1102292 1103149 . - . ID=gene1002;Name=YPZ3_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05020;old_locus_tag=YPZ3_0851 NC_014029.1 Protein Homology CDS 1102292 1103149 . - 0 ID=cds991;Parent=gene1002;Dbxref=Genbank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209908.1;transl_table=11 NC_014029.1 RefSeq gene 1103525 1104043 . - . ID=gene1003;Name=YPZ3_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05025;old_locus_tag=YPZ3_0852 NC_014029.1 Protein Homology CDS 1103525 1104043 . - 0 ID=cds992;Parent=gene1003;Dbxref=Genbank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11 NC_014029.1 RefSeq gene 1104822 1105823 . - . ID=gene1004;Name=YPZ3_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05030;old_locus_tag=YPZ3_0853 NC_014029.1 Protein Homology CDS 1104822 1105823 . - 0 ID=cds993;Parent=gene1004;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11 NC_014029.1 RefSeq gene 1106258 1107262 . - . ID=gene1005;Name=YPZ3_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05035;old_locus_tag=YPZ3_0854 NC_014029.1 Protein Homology CDS 1106258 1107262 . - 0 ID=cds994;Parent=gene1005;Dbxref=Genbank:WP_002209904.1;Name=WP_002209904.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209904.1;transl_table=11 NC_014029.1 RefSeq gene 1107334 1108842 . - . ID=gene1006;Name=YPZ3_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05040;old_locus_tag=YPZ3_0855 NC_014029.1 Protein Homology CDS 1107334 1108842 . - 0 ID=cds995;Parent=gene1006;Dbxref=Genbank:WP_002209903.1;Name=WP_002209903.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=enolase;protein_id=WP_002209903.1;transl_table=11 NC_014029.1 RefSeq gene 1109391 1110491 . - . ID=gene1007;Name=YPZ3_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05045;old_locus_tag=YPZ3_0856 NC_014029.1 Protein Homology CDS 1109391 1110491 . - 0 ID=cds996;Parent=gene1007;Dbxref=Genbank:WP_002209902.1;Name=WP_002209902.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209902.1;transl_table=11 NC_014029.1 RefSeq gene 1110854 1112089 . + . ID=gene1008;Name=YPZ3_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05050;old_locus_tag=YPZ3_0857 NC_014029.1 Protein Homology CDS 1110854 1112089 . + 0 ID=cds997;Parent=gene1008;Dbxref=Genbank:WP_002209901.1;Name=WP_002209901.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_002209901.1;transl_table=11 NC_014029.1 RefSeq gene 1112249 1113556 . + . ID=gene1009;Name=YPZ3_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05055;old_locus_tag=YPZ3_0858 NC_014029.1 Protein Homology CDS 1112249 1113556 . + 0 ID=cds998;Parent=gene1009;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NC_014029.1 RefSeq gene 1113568 1114419 . + . ID=gene1010;Name=YPZ3_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05060;old_locus_tag=YPZ3_0859 NC_014029.1 Protein Homology CDS 1113568 1114419 . + 0 ID=cds999;Parent=gene1010;Dbxref=Genbank:WP_002209899.1;Name=WP_002209899.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NC_014029.1 RefSeq gene 1114424 1115626 . + . ID=gene1011;Name=YPZ3_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05065;old_locus_tag=YPZ3_0860 NC_014029.1 Protein Homology CDS 1114424 1115626 . + 0 ID=cds1000;Parent=gene1011;Dbxref=Genbank:WP_002209898.1;Name=WP_002209898.1;gbkey=CDS;product=galactosidase;protein_id=WP_002209898.1;transl_table=11 NC_014029.1 RefSeq gene 1115677 1117737 . + . ID=gene1012;Name=YPZ3_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05070;old_locus_tag=YPZ3_0861 NC_014029.1 Protein Homology CDS 1115677 1117737 . + 0 ID=cds1001;Parent=gene1012;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NC_014029.1 RefSeq gene 1117849 1118160 . + . ID=gene1013;Name=YPZ3_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05075;old_locus_tag=YPZ3_0862 NC_014029.1 Protein Homology CDS 1117849 1118160 . + 0 ID=cds1002;Parent=gene1013;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11 NC_014029.1 RefSeq gene 1118533 1119792 . - . ID=gene1014;Name=YPZ3_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05080;old_locus_tag=YPZ3_0863 NC_014029.1 Protein Homology CDS 1118533 1119792 . - 0 ID=cds1003;Parent=gene1014;Dbxref=Genbank:WP_002215759.1;Name=WP_002215759.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_002215759.1;transl_table=11 NC_014029.1 RefSeq gene 1120064 1121137 . + . ID=gene1015;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YPZ3_RS05085;old_locus_tag=YPZ3_0864 NC_014029.1 Protein Homology CDS 1120064 1121137 . + 0 ID=cds1004;Parent=gene1015;Dbxref=Genbank:WP_002209894.1;Name=WP_002209894.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_002209894.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1121268 1121439 . + . ID=id87;gbkey=repeat_region NC_014029.1 RefSeq gene 1121482 1123857 . - . ID=gene1016;Name=YPZ3_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05090;old_locus_tag=YPZ3_0865 NC_014029.1 Protein Homology CDS 1121482 1123857 . - 0 ID=cds1005;Parent=gene1016;Dbxref=Genbank:WP_002209892.1;Name=WP_002209892.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_002209892.1;transl_table=11 NC_014029.1 RefSeq gene 1124008 1125315 . - . ID=gene1017;Name=YPZ3_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05095;old_locus_tag=YPZ3_0866 NC_014029.1 Protein Homology CDS 1124008 1125315 . - 0 ID=cds1006;Parent=gene1017;Dbxref=Genbank:WP_002209891.1;Name=WP_002209891.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=sugar transporter;protein_id=WP_002209891.1;transl_table=11 NC_014029.1 RefSeq gene 1125709 1126791 . + . ID=gene1018;Name=YPZ3_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05100;old_locus_tag=YPZ3_0867 NC_014029.1 Protein Homology CDS 1125709 1126791 . + 0 ID=cds1007;Parent=gene1018;Dbxref=Genbank:WP_002209890.1;Name=WP_002209890.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209890.1;transl_table=11 NC_014029.1 RefSeq gene 1126781 1127062 . + . ID=gene1019;Name=YPZ3_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05105 NC_014029.1 Protein Homology CDS 1126781 1127062 . + 0 ID=cds1008;Parent=gene1019;Dbxref=Genbank:WP_002215765.1;Name=WP_002215765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215765.1;transl_table=11 NC_014029.1 RefSeq gene 1127032 1127610 . - . ID=gene1020;Name=YPZ3_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05110;old_locus_tag=YPZ3_0868 NC_014029.1 Protein Homology CDS 1127032 1127610 . - 0 ID=cds1009;Parent=gene1020;Dbxref=Genbank:WP_002209889.1;Name=WP_002209889.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_002209889.1;transl_table=11 NC_014029.1 RefSeq gene 1127634 1128488 . - . ID=gene1021;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=YPZ3_RS05115;old_locus_tag=YPZ3_0869 NC_014029.1 Protein Homology CDS 1127634 1128488 . - 0 ID=cds1010;Parent=gene1021;Dbxref=Genbank:WP_002209888.1;Name=WP_002209888.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_002209888.1;transl_table=11 NC_014029.1 RefSeq gene 1128597 1130084 . - . ID=gene1022;Name=YPZ3_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05120;old_locus_tag=YPZ3_0870 NC_014029.1 Protein Homology CDS 1128597 1130084 . - 0 ID=cds1011;Parent=gene1022;Dbxref=Genbank:WP_002209887.1;Name=WP_002209887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209887.1;transl_table=11 NC_014029.1 RefSeq gene 1130207 1131814 . - . ID=gene1023;Name=YPZ3_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05125;old_locus_tag=YPZ3_0871 NC_014029.1 Protein Homology CDS 1130207 1131814 . - 0 ID=cds1012;Parent=gene1023;Dbxref=Genbank:WP_002209886.1;Name=WP_002209886.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209886.1;transl_table=11 NC_014029.1 RefSeq gene 1131835 1133061 . - . ID=gene1024;Name=YPZ3_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05130;old_locus_tag=YPZ3_0872 NC_014029.1 Protein Homology CDS 1131835 1133061 . - 0 ID=cds1013;Parent=gene1024;Dbxref=Genbank:WP_002209885.1;Name=WP_002209885.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002209885.1;transl_table=11 NC_014029.1 RefSeq gene 1133305 1134363 . - . ID=gene1025;Name=YPZ3_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05135;old_locus_tag=YPZ3_0873 NC_014029.1 Protein Homology CDS 1133305 1134363 . - 0 ID=cds1014;Parent=gene1025;Dbxref=Genbank:WP_002209884.1;Name=WP_002209884.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_002209884.1;transl_table=11 NC_014029.1 RefSeq gene 1134379 1135134 . - . ID=gene1026;Name=YPZ3_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05140;old_locus_tag=YPZ3_0874 NC_014029.1 Protein Homology CDS 1134379 1135134 . - 0 ID=cds1015;Parent=gene1026;Dbxref=Genbank:WP_002209883.1;Name=WP_002209883.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002209883.1;transl_table=11 NC_014029.1 RefSeq gene 1135330 1136496 . - . ID=gene1027;Name=YPZ3_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05145;old_locus_tag=YPZ3_0875 NC_014029.1 Protein Homology CDS 1135330 1136496 . - 0 ID=cds1016;Parent=gene1027;Dbxref=Genbank:WP_002209882.1;Name=WP_002209882.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002209882.1;transl_table=11 NC_014029.1 RefSeq gene 1136499 1136939 . - . ID=gene1028;Name=YPZ3_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05150;old_locus_tag=YPZ3_0876 NC_014029.1 Protein Homology CDS 1136499 1136939 . - 0 ID=cds1017;Parent=gene1028;Dbxref=Genbank:WP_002209881.1;Name=WP_002209881.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_002209881.1;transl_table=11 NC_014029.1 RefSeq gene 1137025 1137915 . - . ID=gene1029;Name=YPZ3_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05155;old_locus_tag=YPZ3_0877 NC_014029.1 Protein Homology CDS 1137025 1137915 . - 0 ID=cds1018;Parent=gene1029;Dbxref=Genbank:WP_002209880.1;Name=WP_002209880.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NC_014029.1 RefSeq gene 1137905 1138693 . - . ID=gene1030;Name=YPZ3_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05160;old_locus_tag=YPZ3_0878 NC_014029.1 Protein Homology CDS 1137905 1138693 . - 0 ID=cds1019;Parent=gene1030;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NC_014029.1 RefSeq gene 1138740 1139237 . - . ID=gene1031;Name=YPZ3_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05165;old_locus_tag=YPZ3_0879 NC_014029.1 Protein Homology CDS 1138740 1139237 . - 0 ID=cds1020;Parent=gene1031;Dbxref=Genbank:WP_002209878.1;Name=WP_002209878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NC_014029.1 RefSeq gene 1139255 1140421 . - . ID=gene1032;Name=YPZ3_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05170;old_locus_tag=YPZ3_0880 NC_014029.1 Protein Homology CDS 1139255 1140421 . - 0 ID=cds1021;Parent=gene1032;Dbxref=Genbank:WP_002209877.1;Name=WP_002209877.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_002209877.1;transl_table=11 NC_014029.1 RefSeq gene 1140418 1141716 . - . ID=gene1033;Name=YPZ3_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05175;old_locus_tag=YPZ3_0881 NC_014029.1 Protein Homology CDS 1140418 1141716 . - 0 ID=cds1022;Parent=gene1033;Dbxref=Genbank:WP_002209876.1;Name=WP_002209876.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose 6-phosphate kinase;protein_id=WP_002209876.1;transl_table=11 NC_014029.1 RefSeq gene 1141766 1142542 . - . ID=gene1034;Name=YPZ3_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05180;old_locus_tag=YPZ3_0882 NC_014029.1 Protein Homology CDS 1141766 1142542 . - 0 ID=cds1023;Parent=gene1034;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11 NC_014029.1 RefSeq gene 1143382 1144935 . + . ID=gene1035;Name=YPZ3_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05185;old_locus_tag=YPZ3_0883 NC_014029.1 Protein Homology CDS 1143382 1144935 . + 0 ID=cds1024;Parent=gene1035;Dbxref=Genbank:WP_002209873.1;Name=WP_002209873.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209873.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1145115 1147953 . + . ID=id88;gbkey=repeat_region NC_014029.1 RefSeq gene 1145387 1145821 . - . ID=gene1036;Name=YPZ3_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05190;old_locus_tag=YPZ3_0884 NC_014029.1 Protein Homology CDS 1145387 1145821 . - 0 ID=cds1025;Parent=gene1036;Dbxref=Genbank:WP_002209872.1;Name=WP_002209872.1;gbkey=CDS;product=transposase;protein_id=WP_002209872.1;transl_table=11 NC_014029.1 RefSeq gene 1145878 1146900 . + . ID=gene1037;Name=YPZ3_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05195;old_locus_tag=YPZ3_0885 NC_014029.1 Protein Homology CDS 1145878 1146900 . + 0 ID=cds1026;Parent=gene1037;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 1146900 1147679 . + . ID=gene1038;Name=YPZ3_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05200;old_locus_tag=YPZ3_0886 NC_014029.1 Protein Homology CDS 1146900 1147679 . + 0 ID=cds1027;Parent=gene1038;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 1148024 1151137 . - . ID=gene1039;Name=YPZ3_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05205;old_locus_tag=YPZ3_0887 NC_014029.1 Protein Homology CDS 1148024 1151137 . - 0 ID=cds1028;Parent=gene1039;Dbxref=Genbank:WP_002214081.1;Name=WP_002214081.1;gbkey=CDS;product=chondroitin ABC lyase;protein_id=WP_002214081.1;transl_table=11 NC_014029.1 RefSeq gene 1151207 1153393 . - . ID=gene1040;Name=YPZ3_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05210;old_locus_tag=YPZ3_0888 NC_014029.1 Protein Homology CDS 1151207 1153393 . - 0 ID=cds1029;Parent=gene1040;Dbxref=Genbank:WP_002209869.1;Name=WP_002209869.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209869.1;transl_table=11 NC_014029.1 RefSeq gene 1153508 1154458 . - . ID=gene1041;Name=YPZ3_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05215;old_locus_tag=YPZ3_0889 NC_014029.1 Protein Homology CDS 1153508 1154458 . - 0 ID=cds1030;Parent=gene1041;Dbxref=Genbank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209868.1;transl_table=11 NC_014029.1 RefSeq gene 1154480 1154674 . - . ID=gene1042;Name=YPZ3_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05220 NC_014029.1 Protein Homology CDS 1154480 1154674 . - 0 ID=cds1031;Parent=gene1042;Dbxref=Genbank:WP_002214083.1;Name=WP_002214083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214083.1;transl_table=11 NC_014029.1 RefSeq gene 1155061 1155249 . - . ID=gene1043;Name=YPZ3_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05225 NC_014029.1 Protein Homology CDS 1155061 1155249 . - 0 ID=cds1032;Parent=gene1043;Dbxref=Genbank:WP_002214085.1;Name=WP_002214085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214085.1;transl_table=11 NC_014029.1 RefSeq gene 1155745 1156500 . + . ID=gene1044;Name=YPZ3_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05230;old_locus_tag=YPZ3_0890 NC_014029.1 Protein Homology CDS 1155745 1156500 . + 0 ID=cds1033;Parent=gene1044;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NC_014029.1 RefSeq gene 1157243 1157659 . + . ID=gene1045;Name=YPZ3_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05235;old_locus_tag=YPZ3_0891 NC_014029.1 Protein Homology CDS 1157243 1157659 . + 0 ID=cds1034;Parent=gene1045;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11 NC_014029.1 RefSeq gene 1157829 1158230 . + . ID=gene1046;Name=YPZ3_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05240;old_locus_tag=YPZ3_0892 NC_014029.1 Protein Homology CDS 1157829 1158230 . + 0 ID=cds1035;Parent=gene1046;Dbxref=Genbank:WP_002209865.1;Name=WP_002209865.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_002209865.1;transl_table=11 NC_014029.1 RefSeq gene 1158311 1160233 . + . ID=gene1047;Name=YPZ3_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05245;old_locus_tag=YPZ3_0893 NC_014029.1 Protein Homology CDS 1158311 1160233 . + 0 ID=cds1036;Parent=gene1047;Dbxref=Genbank:WP_002220086.1;Name=WP_002220086.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_002220086.1;transl_table=11 NC_014029.1 RefSeq gene 1160230 1161741 . + . ID=gene1048;Name=YPZ3_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05250;old_locus_tag=YPZ3_0894 NC_014029.1 Protein Homology CDS 1160230 1161741 . + 0 ID=cds1037;Parent=gene1048;Dbxref=Genbank:WP_002209863.1;Name=WP_002209863.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_002209863.1;transl_table=11 NC_014029.1 RefSeq gene 1161728 1161922 . + . ID=gene1049;Name=YPZ3_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05255 NC_014029.1 Protein Homology CDS 1161728 1161922 . + 0 ID=cds1038;Parent=gene1049;Dbxref=Genbank:WP_002214090.1;Name=WP_002214090.1;gbkey=CDS;product=general secretion pathway protein GspF;protein_id=WP_002214090.1;transl_table=11 NC_014029.1 RefSeq gene 1161883 1162929 . + . ID=gene1050;Name=YPZ3_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05260;old_locus_tag=YPZ3_0895 NC_014029.1 Protein Homology CDS 1161883 1162929 . + 0 ID=cds1039;Parent=gene1050;Dbxref=Genbank:WP_002229014.1;Name=WP_002229014.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_002229014.1;transl_table=11 NC_014029.1 RefSeq gene 1162949 1163386 . + . ID=gene1051;Name=YPZ3_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05265;old_locus_tag=YPZ3_0896 NC_014029.1 Protein Homology CDS 1162949 1163386 . + 0 ID=cds1040;Parent=gene1051;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11 NC_014029.1 RefSeq gene 1163391 1163933 . + . ID=gene1052;Name=YPZ3_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05270 NC_014029.1 Protein Homology CDS 1163391 1163933 . + 0 ID=cds1041;Parent=gene1052;Dbxref=Genbank:WP_002214092.1;Name=WP_002214092.1;gbkey=CDS;product=general secretion pathway protein GspH;protein_id=WP_002214092.1;transl_table=11 NC_014029.1 RefSeq gene 1164025 1164315 . + . ID=gene1053;Name=YPZ3_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05275 NC_014029.1 Protein Homology CDS 1164025 1164315 . + 0 ID=cds1042;Parent=gene1053;Dbxref=Genbank:WP_002214093.1;Name=WP_002214093.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_002214093.1;transl_table=11 NC_014029.1 RefSeq gene 1164308 1164904 . + . ID=gene1054;Name=YPZ3_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05280 NC_014029.1 Protein Homology CDS 1164308 1164904 . + 0 ID=cds1043;Parent=gene1054;Dbxref=Genbank:WP_002209860.1;Name=WP_002209860.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_002209860.1;transl_table=11 NC_014029.1 RefSeq gene 1164973 1165869 . + . ID=gene1055;Name=YPZ3_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05285;old_locus_tag=YPZ3_0898 NC_014029.1 Protein Homology CDS 1164973 1165869 . + 0 ID=cds1044;Parent=gene1055;Dbxref=Genbank:WP_002209859.1;Name=WP_002209859.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_002209859.1;transl_table=11 NC_014029.1 RefSeq gene 1165853 1167043 . + . ID=gene1056;Name=YPZ3_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05290;old_locus_tag=YPZ3_0899 NC_014029.1 Protein Homology CDS 1165853 1167043 . + 0 ID=cds1045;Parent=gene1056;Dbxref=Genbank:WP_002209858.1;Name=WP_002209858.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_002209858.1;transl_table=11 NC_014029.1 RefSeq gene 1167052 1167501 . + . ID=gene1057;Name=YPZ3_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05295 NC_014029.1 Protein Homology CDS 1167052 1167501 . + 0 ID=cds1046;Parent=gene1057;Dbxref=Genbank:WP_002226092.1;Name=WP_002226092.1;gbkey=CDS;product=membrane protein;protein_id=WP_002226092.1;transl_table=11 NC_014029.1 RefSeq gene 1167530 1168369 . + . ID=gene1058;Name=YPZ3_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05300;old_locus_tag=YPZ3_0900 NC_014029.1 Protein Homology CDS 1167530 1168369 . + 0 ID=cds1047;Parent=gene1058;Dbxref=Genbank:WP_002209856.1;Name=WP_002209856.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11 NC_014029.1 RefSeq gene 1168421 1168726 . - . ID=gene1059;Name=YPZ3_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05305;old_locus_tag=YPZ3_0901 NC_014029.1 Protein Homology CDS 1168421 1168726 . - 0 ID=cds1048;Parent=gene1059;Dbxref=Genbank:WP_002214097.1;Name=WP_002214097.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002214097.1;transl_table=11 NC_014029.1 RefSeq gene 1169010 1169726 . + . ID=gene1060;Name=YPZ3_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05310;old_locus_tag=YPZ3_0902 NC_014029.1 Protein Homology CDS 1169010 1169726 . + 0 ID=cds1049;Parent=gene1060;Dbxref=Genbank:WP_002214099.1;Name=WP_002214099.1;gbkey=CDS;product=regulatory membrane protein;protein_id=WP_002214099.1;transl_table=11 NC_014029.1 RefSeq gene 1169723 1170124 . + . ID=gene1061;Name=YPZ3_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05315 NC_014029.1 Protein Homology CDS 1169723 1170124 . + 0 ID=cds1050;Parent=gene1061;Dbxref=Genbank:WP_002214100.1;Name=WP_002214100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214100.1;transl_table=11 NC_014029.1 RefSeq gene 1170279 1171970 . + . ID=gene1062;Name=YPZ3_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05320;old_locus_tag=YPZ3_0903 NC_014029.1 Protein Homology CDS 1170279 1171970 . + 0 ID=cds1051;Parent=gene1062;Dbxref=Genbank:WP_002209853.1;Name=WP_002209853.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209853.1;transl_table=11 NC_014029.1 RefSeq gene 1171956 1172591 . - . ID=gene1063;Name=YPZ3_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05325;old_locus_tag=YPZ3_0904 NC_014029.1 Protein Homology CDS 1171956 1172591 . - 0 ID=cds1052;Parent=gene1063;Dbxref=Genbank:WP_002209852.1;Name=WP_002209852.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002209852.1;transl_table=11 NC_014029.1 RefSeq gene 1172704 1173591 . - . ID=gene1064;Name=YPZ3_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05330;old_locus_tag=YPZ3_0905 NC_014029.1 Protein Homology CDS 1172704 1173591 . - 0 ID=cds1053;Parent=gene1064;Dbxref=Genbank:WP_002209850.1;Name=WP_002209850.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002209850.1;transl_table=11 NC_014029.1 RefSeq gene 1173698 1174606 . + . ID=gene1065;Name=YPZ3_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05335;old_locus_tag=YPZ3_0906 NC_014029.1 Protein Homology CDS 1173698 1174606 . + 0 ID=cds1054;Parent=gene1065;Dbxref=Genbank:WP_002209849.1;Name=WP_002209849.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NC_014029.1 RefSeq gene 1174975 1176135 . + . ID=gene1066;Name=YPZ3_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05340;old_locus_tag=YPZ3_0907 NC_014029.1 Protein Homology CDS 1174975 1176135 . + 0 ID=cds1055;Parent=gene1066;Dbxref=Genbank:WP_002209848.1;Name=WP_002209848.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11 NC_014029.1 RefSeq gene 1176132 1177073 . - . ID=gene1067;Name=YPZ3_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05345;old_locus_tag=YPZ3_0908 NC_014029.1 Protein Homology CDS 1176132 1177073 . - 0 ID=cds1056;Parent=gene1067;Dbxref=Genbank:WP_002209847.1;Name=WP_002209847.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209847.1;transl_table=11 NC_014029.1 RefSeq gene 1177288 1178550 . + . ID=gene1068;Name=YPZ3_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05350;old_locus_tag=YPZ3_0909 NC_014029.1 Protein Homology CDS 1177288 1178550 . + 0 ID=cds1057;Parent=gene1068;Dbxref=Genbank:WP_002209846.1;Name=WP_002209846.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_002209846.1;transl_table=11 NC_014029.1 RefSeq gene 1178547 1179569 . - . ID=gene1069;Name=YPZ3_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05355;old_locus_tag=YPZ3_0910 NC_014029.1 Protein Homology CDS 1178547 1179569 . - 0 ID=cds1058;Parent=gene1069;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11 NC_014029.1 RefSeq gene 1179879 1182140 . + . ID=gene1070;Name=YPZ3_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05360;old_locus_tag=YPZ3_0911 NC_014029.1 Protein Homology CDS 1179879 1182140 . + 0 ID=cds1059;Parent=gene1070;Dbxref=Genbank:WP_002209844.1;Name=WP_002209844.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_002209844.1;transl_table=11 NC_014029.1 RefSeq gene 1182589 1184745 . + . ID=gene1071;Name=YPZ3_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05365;old_locus_tag=YPZ3_0912 NC_014029.1 Protein Homology CDS 1182589 1184745 . + 0 ID=cds1060;Parent=gene1071;Dbxref=Genbank:WP_002209843.1;Name=WP_002209843.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=bifunctional protein Aas;protein_id=WP_002209843.1;transl_table=11 NC_014029.1 RefSeq gene 1184742 1185962 . + . ID=gene1072;Name=YPZ3_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05370;old_locus_tag=YPZ3_0913 NC_014029.1 Protein Homology CDS 1184742 1185962 . + 0 ID=cds1061;Parent=gene1072;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NC_014029.1 RefSeq gene 1185991 1186224 . - . ID=gene1073;Name=YPZ3_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05375 NC_014029.1 Protein Homology CDS 1185991 1186224 . - 0 ID=cds1062;Parent=gene1073;Dbxref=Genbank:WP_002228641.1;Name=WP_002228641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228641.1;transl_table=11 NC_014029.1 RefSeq gene 1186303 1186554 . + . ID=gene1074;Name=YPZ3_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05380 NC_014029.1 Protein Homology CDS 1186303 1186554 . + 0 ID=cds1063;Parent=gene1074;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1186707 1186875 . + . ID=id89;gbkey=repeat_region NC_014029.1 RefSeq gene 1186931 1187971 . - . ID=gene1075;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YPZ3_RS05385;old_locus_tag=YPZ3_0914 NC_014029.1 Protein Homology CDS 1186931 1187971 . - 0 ID=cds1064;Parent=gene1075;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NC_014029.1 RefSeq gene 1188360 1189046 . - . ID=gene1076;Name=YPZ3_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05390;old_locus_tag=YPZ3_0915 NC_014029.1 Protein Homology CDS 1188360 1189046 . - 0 ID=cds1065;Parent=gene1076;Dbxref=Genbank:WP_002209838.1;Name=WP_002209838.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_002209838.1;transl_table=11 NC_014029.1 RefSeq gene 1189279 1189470 . + . ID=gene1077;Name=YPZ3_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05395 NC_014029.1 Protein Homology CDS 1189279 1189470 . + 0 ID=cds1066;Parent=gene1077;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11 NC_014029.1 RefSeq gene 1189467 1189718 . + . ID=gene1078;Name=YPZ3_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05400 NC_014029.1 Protein Homology CDS 1189467 1189718 . + 0 ID=cds1067;Parent=gene1078;Dbxref=Genbank:WP_002228075.1;Name=WP_002228075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228075.1;transl_table=11 NC_014029.1 RefSeq gene 1189744 1190271 . + . ID=gene1079;Name=YPZ3_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05405;old_locus_tag=YPZ3_0916 NC_014029.1 Protein Homology CDS 1189744 1190271 . + 0 ID=cds1068;Parent=gene1079;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NC_014029.1 RefSeq gene 1190284 1192530 . + . ID=gene1080;Name=YPZ3_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05410;old_locus_tag=YPZ3_0917 NC_014029.1 Protein Homology CDS 1190284 1192530 . + 0 ID=cds1069;Parent=gene1080;Dbxref=Genbank:WP_002228076.1;Name=WP_002228076.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002228076.1;transl_table=11 NC_014029.1 RefSeq gene 1192781 1193653 . + . ID=gene1081;Name=YPZ3_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05415;old_locus_tag=YPZ3_0918 NC_014029.1 Protein Homology CDS 1192781 1193653 . + 0 ID=cds1070;Parent=gene1081;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NC_014029.1 RefSeq gene 1193660 1194454 . + . ID=gene1082;Name=YPZ3_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05420;old_locus_tag=YPZ3_0919 NC_014029.1 Protein Homology CDS 1193660 1194454 . + 0 ID=cds1071;Parent=gene1082;Dbxref=Genbank:WP_002211384.1;Name=WP_002211384.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_002211384.1;transl_table=11 NC_014029.1 RefSeq gene 1194485 1194703 . + . ID=gene1083;Name=YPZ3_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05425 NC_014029.1 Protein Homology CDS 1194485 1194703 . + 0 ID=cds1072;Parent=gene1083;Dbxref=Genbank:WP_002217548.1;Name=WP_002217548.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217548.1;transl_table=11 NC_014029.1 RefSeq gene 1194690 1195091 . + . ID=gene1084;Name=YPZ3_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05430 NC_014029.1 Protein Homology CDS 1194690 1195091 . + 0 ID=cds1073;Parent=gene1084;Dbxref=Genbank:WP_002217547.1;Name=WP_002217547.1;gbkey=CDS;product=prepilin cleavage protein;protein_id=WP_002217547.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1195084 1197043 . + . ID=id90;gbkey=repeat_region NC_014029.1 RefSeq gene 1195173 1195727 . + . ID=gene1085;Name=YPZ3_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05435;old_locus_tag=YPZ3_0920 NC_014029.1 Protein Homology CDS 1195173 1195727 . + 0 ID=cds1074;Parent=gene1085;Dbxref=Genbank:WP_013060316.1;Name=WP_013060316.1;gbkey=CDS;product=transposase;protein_id=WP_013060316.1;transl_table=11 NC_014029.1 RefSeq gene 1195717 1196196 . + . ID=gene1086;Name=YPZ3_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05440;old_locus_tag=YPZ3_0921 NC_014029.1 Protein Homology CDS 1195717 1196196 . + 0 ID=cds1075;Parent=gene1086;Dbxref=Genbank:WP_001386557.1;Name=WP_001386557.1;gbkey=CDS;product=transposase;protein_id=WP_001386557.1;transl_table=11 NC_014029.1 RefSeq gene 1196196 1196975 . + . ID=gene1087;Name=YPZ3_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05445;old_locus_tag=YPZ3_0922 NC_014029.1 Protein Homology CDS 1196196 1196975 . + 0 ID=cds1076;Parent=gene1087;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 1197210 1197818 . + . ID=gene1088;Name=YPZ3_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05450;old_locus_tag=YPZ3_0923 NC_014029.1 Protein Homology CDS 1197210 1197818 . + 0 ID=cds1077;Parent=gene1088;Dbxref=Genbank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002211630.1;transl_table=11 NC_014029.1 RefSeq gene 1197815 1198285 . + . ID=gene1089;Name=YPZ3_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05455;old_locus_tag=YPZ3_0924 NC_014029.1 Protein Homology CDS 1197815 1198285 . + 0 ID=cds1078;Parent=gene1089;Dbxref=Genbank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211629.1;transl_table=11 NC_014029.1 RefSeq gene 1198318 1198683 . + . ID=gene1090;Name=YPZ3_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05460;old_locus_tag=YPZ3_0925 NC_014029.1 Protein Homology CDS 1198318 1198683 . + 0 ID=cds1079;Parent=gene1090;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11 NC_014029.1 RefSeq gene 1198818 1202189 . + . ID=gene1091;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YPZ3_RS05465;old_locus_tag=YPZ3_0926 NC_014029.1 Protein Homology CDS 1198818 1202189 . + 0 ID=cds1080;Parent=gene1091;Dbxref=Genbank:WP_002211627.1;Name=WP_002211627.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_002211627.1;transl_table=11 NC_014029.1 RefSeq gene 1202271 1205159 . + . ID=gene1092;Name=YPZ3_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05470;old_locus_tag=YPZ3_0927 NC_014029.1 Protein Homology CDS 1202271 1205159 . + 0 ID=cds1081;Parent=gene1092;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11 NC_014029.1 RefSeq gene 1205156 1208818 . + . ID=gene1093;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=YPZ3_RS05475;old_locus_tag=YPZ3_0928 NC_014029.1 Protein Homology CDS 1205156 1208818 . + 0 ID=cds1082;Parent=gene1093;Dbxref=Genbank:WP_002215833.1;Name=WP_002215833.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_002215833.1;transl_table=11 NC_014029.1 RefSeq gene 1208815 1210773 . + . ID=gene1094;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YPZ3_RS05480;old_locus_tag=YPZ3_0929 NC_014029.1 Protein Homology CDS 1208815 1210773 . + 0 ID=cds1083;Parent=gene1094;Dbxref=Genbank:WP_002215834.1;Name=WP_002215834.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_002215834.1;transl_table=11 NC_014029.1 RefSeq gene 1210928 1212253 . - . ID=gene1095;Name=YPZ3_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05485;old_locus_tag=YPZ3_0930 NC_014029.1 Protein Homology CDS 1210928 1212253 . - 0 ID=cds1084;Parent=gene1095;Dbxref=Genbank:WP_002211624.1;Name=WP_002211624.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=amino-acid acetyltransferase;protein_id=WP_002211624.1;transl_table=11 NC_014029.1 RefSeq gene 1212489 1213739 . + . ID=gene1096;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YPZ3_RS05490;old_locus_tag=YPZ3_0931 NC_014029.1 Protein Homology CDS 1212489 1213739 . + 0 ID=cds1085;Parent=gene1096;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11 NC_014029.1 RefSeq gene 1213969 1214045 . - . ID=gene1097;Name=YPZ3_RS05495;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS05495;old_locus_tag=YPZ3_t8 NC_014029.1 tRNAscan-SE tRNA 1213969 1214045 . - . ID=rna10;Parent=gene1097;anticodon=(pos:complement(1214009..1214011));gbkey=tRNA;product=tRNA-Met NC_014029.1 tRNAscan-SE exon 1213969 1214045 . - . ID=id91;Parent=rna10;anticodon=(pos:complement(1214009..1214011));gbkey=tRNA;product=tRNA-Met NC_014029.1 RefSeq gene 1214169 1214245 . - . ID=gene1098;Name=YPZ3_RS05500;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS05500;old_locus_tag=YPZ3_t9 NC_014029.1 tRNAscan-SE tRNA 1214169 1214245 . - . ID=rna11;Parent=gene1098;anticodon=(pos:complement(1214209..1214211));gbkey=tRNA;product=tRNA-Met NC_014029.1 tRNAscan-SE exon 1214169 1214245 . - . ID=id92;Parent=rna11;anticodon=(pos:complement(1214209..1214211));gbkey=tRNA;product=tRNA-Met NC_014029.1 RefSeq gene 1214461 1215633 . + . ID=gene1099;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YPZ3_RS05505;old_locus_tag=YPZ3_0932 NC_014029.1 Protein Homology CDS 1214461 1215633 . + 0 ID=cds1086;Parent=gene1099;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11 NC_014029.1 RefSeq gene 1215776 1216603 . + . ID=gene1100;Name=YPZ3_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05510;old_locus_tag=YPZ3_0933 NC_014029.1 Protein Homology CDS 1215776 1216603 . + 0 ID=cds1087;Parent=gene1100;Dbxref=Genbank:WP_002212114.1;Name=WP_002212114.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_002212114.1;transl_table=11 NC_014029.1 RefSeq gene 1216639 1217082 . - . ID=gene1101;Name=YPZ3_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05515;old_locus_tag=YPZ3_0934 NC_014029.1 Protein Homology CDS 1216639 1217082 . - 0 ID=cds1088;Parent=gene1101;Dbxref=Genbank:WP_002212115.1;Name=WP_002212115.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_002212115.1;transl_table=11 NC_014029.1 RefSeq gene 1217217 1218422 . - . ID=gene1102;Name=YPZ3_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05520;old_locus_tag=YPZ3_0935 NC_014029.1 Protein Homology CDS 1217217 1218422 . - 0 ID=cds1089;Parent=gene1102;Dbxref=Genbank:WP_002212116.1;Name=WP_002212116.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_002212116.1;transl_table=11 NC_014029.1 RefSeq gene 1219082 1219999 . + . ID=gene1103;Name=YPZ3_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05525;old_locus_tag=YPZ3_0936 NC_014029.1 Protein Homology CDS 1219082 1219999 . + 0 ID=cds1090;Parent=gene1103;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11 NC_014029.1 RefSeq gene 1220180 1220560 . + . ID=gene1104;Name=YPZ3_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05530;old_locus_tag=YPZ3_0937 NC_014029.1 Protein Homology CDS 1220180 1220560 . + 0 ID=cds1091;Parent=gene1104;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11 NC_014029.1 RefSeq gene 1220553 1221659 . + . ID=gene1105;Name=YPZ3_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05535;old_locus_tag=YPZ3_0938 NC_014029.1 Protein Homology CDS 1220553 1221659 . + 0 ID=cds1092;Parent=gene1105;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1221700 1221878 . + . ID=id93;gbkey=repeat_region NC_014029.1 RefSeq gene 1221910 1222665 . - . ID=gene1106;Name=YPZ3_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05540;old_locus_tag=YPZ3_0939 NC_014029.1 Protein Homology CDS 1221910 1222665 . - 0 ID=cds1093;Parent=gene1106;Dbxref=Genbank:WP_002215970.1;Name=WP_002215970.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_002215970.1;transl_table=11 NC_014029.1 RefSeq gene 1222925 1224289 . - . ID=gene1107;Name=YPZ3_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05545;old_locus_tag=YPZ3_0940 NC_014029.1 Protein Homology CDS 1222925 1224289 . - 0 ID=cds1094;Parent=gene1107;Dbxref=Genbank:WP_013060317.1;Name=WP_013060317.1;gbkey=CDS;product=LOG family protein;protein_id=WP_013060317.1;transl_table=11 NC_014029.1 RefSeq gene 1224442 1225287 . - . ID=gene1108;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YPZ3_RS05550;old_locus_tag=YPZ3_0941 NC_014029.1 Protein Homology CDS 1224442 1225287 . - 0 ID=cds1095;Parent=gene1108;Dbxref=Genbank:WP_002212122.1;Name=WP_002212122.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_002212122.1;transl_table=11 NC_014029.1 RefSeq gene 1225419 1225970 . + . ID=gene1109;Name=YPZ3_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05555;old_locus_tag=YPZ3_0942 NC_014029.1 Protein Homology CDS 1225419 1225970 . + 0 ID=cds1096;Parent=gene1109;Dbxref=Genbank:WP_002212123.1;Name=WP_002212123.1;gbkey=CDS;product=protein Syd;protein_id=WP_002212123.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1226508 1227229 . + . ID=id94;gbkey=repeat_region NC_014029.1 RefSeq gene 1226660 1227118 . + . ID=gene1110;Name=YPZ3_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05560;old_locus_tag=YPZ3_0943 NC_014029.1 Protein Homology CDS 1226660 1227118 . + 0 ID=cds1097;Parent=gene1110;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1227372 1227704 . + . ID=gene1111;Name=YPZ3_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05565;old_locus_tag=YPZ3_0944 NC_014029.1 Protein Homology CDS 1227372 1227704 . + 0 ID=cds1098;Parent=gene1111;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11 NC_014029.1 RefSeq gene 1227704 1228477 . + . ID=gene1112;Name=YPZ3_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05570;old_locus_tag=YPZ3_0945 NC_014029.1 Protein Homology CDS 1227704 1228477 . + 0 ID=cds1099;Parent=gene1112;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11 NC_014029.1 RefSeq gene 1228505 1228954 . + . ID=gene1113;Name=YPZ3_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05575;old_locus_tag=YPZ3_0946 NC_014029.1 Protein Homology CDS 1228505 1228954 . + 0 ID=cds1100;Parent=gene1113;Dbxref=Genbank:WP_002212126.1;Name=WP_002212126.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002212126.1;transl_table=11 NC_014029.1 RefSeq gene 1229044 1229433 . - . ID=gene1114;Name=YPZ3_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05580;old_locus_tag=YPZ3_0947 NC_014029.1 Protein Homology CDS 1229044 1229433 . - 0 ID=cds1101;Parent=gene1114;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11 NC_014029.1 RefSeq gene 1229557 1230381 . - . ID=gene1115;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YPZ3_RS05585;old_locus_tag=YPZ3_0948 NC_014029.1 Protein Homology CDS 1229557 1230381 . - 0 ID=cds1102;Parent=gene1115;Dbxref=Genbank:WP_002212128.1;Name=WP_002212128.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NC_014029.1 RefSeq gene 1230556 1233237 . - . ID=gene1116;Name=YPZ3_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05590;old_locus_tag=YPZ3_0949 NC_014029.1 Protein Homology CDS 1230556 1233237 . - 0 ID=cds1103;Parent=gene1116;Dbxref=Genbank:WP_002212129.1;Name=WP_002212129.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_002212129.1;transl_table=11 NC_014029.1 RefSeq gene 1233297 1234088 . - . ID=gene1117;Name=YPZ3_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05595;old_locus_tag=YPZ3_0950 NC_014029.1 Protein Homology CDS 1233297 1234088 . - 0 ID=cds1104;Parent=gene1117;Dbxref=Genbank:WP_002212130.1;Name=WP_002212130.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_002212130.1;transl_table=11 NC_014029.1 RefSeq gene 1234523 1235248 . + . ID=gene1118;Name=YPZ3_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05600;old_locus_tag=YPZ3_0951 NC_014029.1 Protein Homology CDS 1234523 1235248 . + 0 ID=cds1105;Parent=gene1118;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NC_014029.1 RefSeq gene 1235376 1236233 . + . ID=gene1119;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YPZ3_RS05605;old_locus_tag=YPZ3_0952 NC_014029.1 Protein Homology CDS 1235376 1236233 . + 0 ID=cds1106;Parent=gene1119;Dbxref=Genbank:WP_002212132.1;Name=WP_002212132.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NC_014029.1 RefSeq gene 1236442 1237167 . + . ID=gene1120;Name=YPZ3_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05610;old_locus_tag=YPZ3_0953 NC_014029.1 Protein Homology CDS 1236442 1237167 . + 0 ID=cds1107;Parent=gene1120;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11 NC_014029.1 RefSeq gene 1237303 1237860 . + . ID=gene1121;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YPZ3_RS05615;old_locus_tag=YPZ3_0954 NC_014029.1 Protein Homology CDS 1237303 1237860 . + 0 ID=cds1108;Parent=gene1121;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11 NC_014029.1 RefSeq gene 1238074 1239270 . + . ID=gene1122;Name=YPZ3_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05620;old_locus_tag=YPZ3_0955 NC_014029.1 Protein Homology CDS 1238074 1239270 . + 0 ID=cds1109;Parent=gene1122;Dbxref=Genbank:WP_002212135.1;Name=WP_002212135.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11 NC_014029.1 RefSeq gene 1239494 1240252 . + . ID=gene1123;Name=YPZ3_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05625;old_locus_tag=YPZ3_0956 NC_014029.1 Protein Homology CDS 1239494 1240252 . + 0 ID=cds1110;Parent=gene1123;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11 NC_014029.1 RefSeq gene 1240262 1241110 . + . ID=gene1124;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YPZ3_RS05630;old_locus_tag=YPZ3_0957 NC_014029.1 Protein Homology CDS 1240262 1241110 . + 0 ID=cds1111;Parent=gene1124;Dbxref=Genbank:WP_002212137.1;Name=WP_002212137.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_002212137.1;transl_table=11 NC_014029.1 RefSeq gene 1241139 1242494 . + . ID=gene1125;Name=YPZ3_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05635;old_locus_tag=YPZ3_0958 NC_014029.1 Protein Homology CDS 1241139 1242494 . + 0 ID=cds1112;Parent=gene1125;Dbxref=Genbank:WP_002212138.1;Name=WP_002212138.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=protease RseP;protein_id=WP_002212138.1;transl_table=11 NC_014029.1 RefSeq gene 1242531 1244918 . + . ID=gene1126;Name=YPZ3_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05640;old_locus_tag=YPZ3_0959 NC_014029.1 Protein Homology CDS 1242531 1244918 . + 0 ID=cds1113;Parent=gene1126;Dbxref=Genbank:WP_002212139.1;Name=WP_002212139.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NC_014029.1 RefSeq gene 1245076 1245573 . + . ID=gene1127;Name=YPZ3_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05645;old_locus_tag=YPZ3_0960 NC_014029.1 Protein Homology CDS 1245076 1245573 . + 0 ID=cds1114;Parent=gene1127;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11 NC_014029.1 RefSeq gene 1245577 1246599 . + . ID=gene1128;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YPZ3_RS05650;old_locus_tag=YPZ3_0961 NC_014029.1 Protein Homology CDS 1245577 1246599 . + 0 ID=cds1115;Parent=gene1128;Dbxref=Genbank:WP_002212141.1;Name=WP_002212141.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002212141.1;transl_table=11 NC_014029.1 RefSeq gene 1246757 1247302 . + . ID=gene1129;Name=YPZ3_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05655;old_locus_tag=YPZ3_0962 NC_014029.1 Protein Homology CDS 1246757 1247302 . + 0 ID=cds1116;Parent=gene1129;Dbxref=Genbank:WP_002212142.1;Name=WP_002212142.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002212142.1;transl_table=11 NC_014029.1 RefSeq gene 1247306 1248094 . + . ID=gene1130;Name=YPZ3_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05660;old_locus_tag=YPZ3_0963 NC_014029.1 Protein Homology CDS 1247306 1248094 . + 0 ID=cds1117;Parent=gene1130;Dbxref=Genbank:WP_002212143.1;Name=WP_002212143.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NC_014029.1 RefSeq gene 1248098 1249282 . + . ID=gene1131;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YPZ3_RS05665;old_locus_tag=YPZ3_0964 NC_014029.1 Protein Homology CDS 1248098 1249282 . + 0 ID=cds1118;Parent=gene1131;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NC_014029.1 RefSeq gene 1249279 1249875 . + . ID=gene1132;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YPZ3_RS05670;old_locus_tag=YPZ3_0965 NC_014029.1 Protein Homology CDS 1249279 1249875 . + 0 ID=cds1119;Parent=gene1132;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NC_014029.1 RefSeq gene 1250038 1253520 . + . ID=gene1133;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPZ3_RS05675;old_locus_tag=YPZ3_0966 NC_014029.1 Protein Homology CDS 1250038 1253520 . + 0 ID=cds1120;Parent=gene1133;Dbxref=Genbank:WP_002228634.1;Name=WP_002228634.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_002228634.1;transl_table=11 NC_014029.1 RefSeq gene 1253533 1254492 . + . ID=gene1134;Name=YPZ3_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05680;old_locus_tag=YPZ3_0967 NC_014029.1 Protein Homology CDS 1253533 1254492 . + 0 ID=cds1121;Parent=gene1134;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NC_014029.1 RefSeq gene 1254676 1255074 . + . ID=gene1135;Name=YPZ3_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05685;old_locus_tag=YPZ3_0968 NC_014029.1 Protein Homology CDS 1254676 1255074 . + 0 ID=cds1122;Parent=gene1135;Dbxref=Genbank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;product=lyase;protein_id=WP_002212148.1;transl_table=11 NC_014029.1 RefSeq gene 1255076 1256458 . + . ID=gene1136;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YPZ3_RS05690;old_locus_tag=YPZ3_0969 NC_014029.1 Protein Homology CDS 1255076 1256458 . + 0 ID=cds1123;Parent=gene1136;Dbxref=Genbank:WP_002212149.1;Name=WP_002212149.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_002212149.1;transl_table=11 NC_014029.1 RefSeq gene 1256695 1257012 . + . ID=gene1137;Name=YPZ3_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05695;old_locus_tag=YPZ3_0970 NC_014029.1 Protein Homology CDS 1256695 1257012 . + 0 ID=cds1124;Parent=gene1137;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11 NC_014029.1 RefSeq gene 1257277 1257537 . - . ID=gene1138;Name=YPZ3_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05700 NC_014029.1 Protein Homology CDS 1257277 1257537 . - 0 ID=cds1125;Parent=gene1138;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NC_014029.1 RefSeq gene 1257524 1257724 . - . ID=gene1139;Name=YPZ3_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05705 NC_014029.1 Protein Homology CDS 1257524 1257724 . - 0 ID=cds1126;Parent=gene1139;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11 NC_014029.1 RefSeq gene 1257966 1258514 . + . ID=gene1140;Name=YPZ3_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05710;old_locus_tag=YPZ3_0971 NC_014029.1 Protein Homology CDS 1257966 1258514 . + 0 ID=cds1127;Parent=gene1140;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11 NC_014029.1 RefSeq gene 1258517 1258933 . + . ID=gene1141;Name=YPZ3_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05715;old_locus_tag=YPZ3_0972 NC_014029.1 Protein Homology CDS 1258517 1258933 . + 0 ID=cds1128;Parent=gene1141;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11 NC_014029.1 RefSeq gene 1259018 1259701 . + . ID=gene1142;Name=YPZ3_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05720;old_locus_tag=YPZ3_0973 NC_014029.1 Protein Homology CDS 1259018 1259701 . + 0 ID=cds1129;Parent=gene1142;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11 NC_014029.1 RefSeq gene 1259835 1261553 . - . ID=gene1143;Name=YPZ3_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05725;old_locus_tag=YPZ3_0974 NC_014029.1 Protein Homology CDS 1259835 1261553 . - 0 ID=cds1130;Parent=gene1143;Dbxref=Genbank:WP_002212156.1;Name=WP_002212156.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_002212156.1;transl_table=11 NC_014029.1 RefSeq gene 1261657 1262364 . - . ID=gene1144;Name=YPZ3_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05730;old_locus_tag=YPZ3_0975 NC_014029.1 Protein Homology CDS 1261657 1262364 . - 0 ID=cds1131;Parent=gene1144;Dbxref=Genbank:WP_002212157.1;Name=WP_002212157.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_002212157.1;transl_table=11 NC_014029.1 RefSeq gene 1262361 1262768 . - . ID=gene1145;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YPZ3_RS05735;old_locus_tag=YPZ3_0976 NC_014029.1 Protein Homology CDS 1262361 1262768 . - 0 ID=cds1132;Parent=gene1145;Dbxref=Genbank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_002212158.1;transl_table=11 NC_014029.1 RefSeq gene 1262886 1263701 . - . ID=gene1146;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS05740;old_locus_tag=YPZ3_0977 NC_014029.1 Protein Homology CDS 1262886 1263701 . - 0 ID=cds1133;Parent=gene1146;Dbxref=Genbank:WP_002212159.1;Name=WP_002212159.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_002212159.1;transl_table=11 NC_014029.1 RefSeq gene 1263765 1264418 . - . ID=gene1147;Name=YPZ3_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05745;old_locus_tag=YPZ3_0978 NC_014029.1 Protein Homology CDS 1263765 1264418 . - 0 ID=cds1134;Parent=gene1147;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11 NC_014029.1 RefSeq gene 1264411 1265442 . - . ID=gene1148;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=YPZ3_RS05750;old_locus_tag=YPZ3_0979 NC_014029.1 Protein Homology CDS 1264411 1265442 . - 0 ID=cds1135;Parent=gene1148;Dbxref=Genbank:WP_002212161.1;Name=WP_002212161.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002212161.1;transl_table=11 NC_014029.1 RefSeq gene 1265629 1266195 . + . ID=gene1149;Name=YPZ3_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05755;old_locus_tag=YPZ3_0980 NC_014029.1 Protein Homology CDS 1265629 1266195 . + 0 ID=cds1136;Parent=gene1149;Dbxref=Genbank:WP_002220062.1;Name=WP_002220062.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1266361 1271978 . + . ID=id95;gbkey=repeat_region NC_014029.1 RefSeq gene 1266634 1268182 . + . ID=gene1150;Name=YPZ3_RS05765;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS05765;old_locus_tag=YPZ3_r4 NC_014029.1 RefSeq rRNA 1266634 1268182 . + . ID=rna12;Parent=gene1150;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq exon 1266634 1268182 . + . ID=id96;Parent=rna12;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq gene 1268316 1268391 . + . ID=gene1151;Name=YPZ3_RS05770;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS05770;old_locus_tag=YPZ3_t10 NC_014029.1 tRNAscan-SE tRNA 1268316 1268391 . + . ID=rna13;Parent=gene1151;anticodon=(pos:1268350..1268352);gbkey=tRNA;product=tRNA-Glu NC_014029.1 tRNAscan-SE exon 1268316 1268391 . + . ID=id97;Parent=rna13;anticodon=(pos:1268350..1268352);gbkey=tRNA;product=tRNA-Glu NC_014029.1 RefSeq gene 1268635 1271568 . + . ID=gene1152;Name=YPZ3_RS05775;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS05775;old_locus_tag=YPZ3_r5 NC_014029.1 RefSeq rRNA 1268635 1271568 . + . ID=rna14;Parent=gene1152;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq exon 1268635 1271568 . + . ID=id98;Parent=rna14;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq gene 1271660 1271775 . + . ID=gene1153;Name=YPZ3_RS05780;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS05780;old_locus_tag=YPZ3_r6 NC_014029.1 cmsearch rRNA 1271660 1271775 . + . ID=rna15;Parent=gene1153;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 cmsearch exon 1271660 1271775 . + . ID=id99;Parent=rna15;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 RefSeq gene 1271901 1271977 . + . ID=gene1154;Name=YPZ3_RS05785;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS05785;old_locus_tag=YPZ3_t11 NC_014029.1 tRNAscan-SE tRNA 1271901 1271977 . + . ID=rna16;Parent=gene1154;anticodon=(pos:1271935..1271937);gbkey=tRNA;product=tRNA-Asp NC_014029.1 tRNAscan-SE exon 1271901 1271977 . + . ID=id100;Parent=rna16;anticodon=(pos:1271935..1271937);gbkey=tRNA;product=tRNA-Asp NC_014029.1 RefSeq gene 1272336 1273139 . + . ID=gene1155;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YPZ3_RS05790;old_locus_tag=YPZ3_0981 NC_014029.1 Protein Homology CDS 1272336 1273139 . + 0 ID=cds1137;Parent=gene1155;Dbxref=Genbank:WP_002210693.1;Name=WP_002210693.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase B;protein_id=WP_002210693.1;transl_table=11 NC_014029.1 RefSeq gene 1273192 1273638 . + . ID=gene1156;Name=YPZ3_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05795;old_locus_tag=YPZ3_0982 NC_014029.1 Protein Homology CDS 1273192 1273638 . + 0 ID=cds1138;Parent=gene1156;Dbxref=Genbank:WP_002210694.1;Name=WP_002210694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210694.1;transl_table=11 NC_014029.1 RefSeq gene 1274020 1274781 . + . ID=gene1157;Name=YPZ3_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05800;old_locus_tag=YPZ3_0983 NC_014029.1 Protein Homology CDS 1274020 1274781 . + 0 ID=cds1139;Parent=gene1157;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11 NC_014029.1 RefSeq gene 1274823 1276211 . - . ID=gene1158;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=YPZ3_RS05805;old_locus_tag=YPZ3_0984 NC_014029.1 Protein Homology CDS 1274823 1276211 . - 0 ID=cds1140;Parent=gene1158;Dbxref=Genbank:WP_002228041.1;Name=WP_002228041.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_002228041.1;transl_table=11 NC_014029.1 RefSeq gene 1276283 1277038 . - . ID=gene1159;Name=YPZ3_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05810;old_locus_tag=YPZ3_0985 NC_014029.1 Protein Homology CDS 1276283 1277038 . - 0 ID=cds1141;Parent=gene1159;Dbxref=Genbank:WP_002210697.1;Name=WP_002210697.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_002210697.1;transl_table=11 NC_014029.1 RefSeq gene 1277083 1277803 . + . ID=gene1160;Name=YPZ3_RS05815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS05815;old_locus_tag=YPZ3_0986;pseudo=true NC_014029.1 Protein Homology CDS 1277083 1277803 . + 0 ID=cds1142;Parent=gene1160;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 1277858 1278322 . - . ID=gene1161;Name=YPZ3_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05820;old_locus_tag=YPZ3_0987 NC_014029.1 Protein Homology CDS 1277858 1278322 . - 0 ID=cds1143;Parent=gene1161;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NC_014029.1 RefSeq gene 1278392 1279156 . + . ID=gene1162;Name=YPZ3_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05825;old_locus_tag=YPZ3_0988 NC_014029.1 Protein Homology CDS 1278392 1279156 . + 0 ID=cds1144;Parent=gene1162;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NC_014029.1 RefSeq gene 1279269 1279345 . + . ID=gene1163;Name=YPZ3_RS05830;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS05830;old_locus_tag=YPZ3_t12 NC_014029.1 tRNAscan-SE tRNA 1279269 1279345 . + . ID=rna17;Parent=gene1163;anticodon=(pos:1279303..1279305);gbkey=tRNA;product=tRNA-Asp NC_014029.1 tRNAscan-SE exon 1279269 1279345 . + . ID=id101;Parent=rna17;anticodon=(pos:1279303..1279305);gbkey=tRNA;product=tRNA-Asp NC_014029.1 RefSeq gene 1279402 1280886 . - . ID=gene1164;Name=YPZ3_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05835;old_locus_tag=YPZ3_0989 NC_014029.1 Protein Homology CDS 1279402 1280886 . - 0 ID=cds1145;Parent=gene1164;Dbxref=Genbank:WP_002210701.1;Name=WP_002210701.1;gbkey=CDS;product=permease;protein_id=WP_002210701.1;transl_table=11 NC_014029.1 RefSeq gene 1281146 1281268 . + . ID=gene1165;Name=YPZ3_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05840 NC_014029.1 Protein Homology CDS 1281146 1281268 . + 0 ID=cds1146;Parent=gene1165;Dbxref=Genbank:WP_002210702.1;Name=WP_002210702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210702.1;transl_table=11 NC_014029.1 RefSeq gene 1281261 1281494 . + . ID=gene1166;Name=YPZ3_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05845 NC_014029.1 Protein Homology CDS 1281261 1281494 . + 0 ID=cds1147;Parent=gene1166;Dbxref=Genbank:WP_002210703.1;Name=WP_002210703.1;gbkey=CDS;product=polysaccharide deacetylase;protein_id=WP_002210703.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1281476 1283436 . + . ID=id102;gbkey=repeat_region NC_014029.1 RefSeq gene 1281545 1282324 . - . ID=gene1167;Name=YPZ3_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05850;old_locus_tag=YPZ3_0990 NC_014029.1 Protein Homology CDS 1281545 1282324 . - 0 ID=cds1148;Parent=gene1167;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 1282324 1283346 . - . ID=gene1168;Name=YPZ3_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05855;old_locus_tag=YPZ3_0991 NC_014029.1 Protein Homology CDS 1282324 1283346 . - 0 ID=cds1149;Parent=gene1168;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 1283360 1283536 . - . ID=gene1169;Name=YPZ3_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05860 NC_014029.1 Protein Homology CDS 1283360 1283536 . - 0 ID=cds1150;Parent=gene1169;Dbxref=Genbank:WP_002210704.1;Name=WP_002210704.1;gbkey=CDS;product=integrase;protein_id=WP_002210704.1;transl_table=11 NC_014029.1 RefSeq gene 1283951 1284268 . + . ID=gene1170;Name=YPZ3_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05865 NC_014029.1 Protein Homology CDS 1283951 1284268 . + 0 ID=cds1151;Parent=gene1170;Dbxref=Genbank:WP_002215951.1;Name=WP_002215951.1;gbkey=CDS;product=addiction module protein;protein_id=WP_002215951.1;transl_table=11 NC_014029.1 RefSeq gene 1284274 1284588 . + . ID=gene1171;Name=YPZ3_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05870;old_locus_tag=YPZ3_0992 NC_014029.1 Protein Homology CDS 1284274 1284588 . + 0 ID=cds1152;Parent=gene1171;Dbxref=Genbank:WP_002210705.1;Name=WP_002210705.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210705.1;transl_table=11 NC_014029.1 RefSeq gene 1284937 1286025 . - . ID=gene1172;Name=YPZ3_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05875;old_locus_tag=YPZ3_0993 NC_014029.1 Protein Homology CDS 1284937 1286025 . - 0 ID=cds1153;Parent=gene1172;Dbxref=Genbank:WP_002210707.1;Name=WP_002210707.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210707.1;transl_table=11 NC_014029.1 RefSeq gene 1286022 1286981 . - . ID=gene1173;Name=YPZ3_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05880 NC_014029.1 Protein Homology CDS 1286022 1286981 . - 0 ID=cds1154;Parent=gene1173;Dbxref=Genbank:WP_002215950.1;Name=WP_002215950.1;gbkey=CDS;product=DNA primase;protein_id=WP_002215950.1;transl_table=11 NC_014029.1 RefSeq gene 1286974 1287516 . - . ID=gene1174;Name=YPZ3_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05885 NC_014029.1 Protein Homology CDS 1286974 1287516 . - 0 ID=cds1155;Parent=gene1174;Dbxref=Genbank:WP_002215949.1;Name=WP_002215949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215949.1;transl_table=11 NC_014029.1 RefSeq gene 1287516 1287716 . - . ID=gene1175;Name=YPZ3_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05890 NC_014029.1 Protein Homology CDS 1287516 1287716 . - 0 ID=cds1156;Parent=gene1175;Dbxref=Genbank:WP_002210709.1;Name=WP_002210709.1;gbkey=CDS;product=dipicolinate synthase;protein_id=WP_002210709.1;transl_table=11 NC_014029.1 RefSeq gene 1287709 1288596 . - . ID=gene1176;Name=YPZ3_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05895;old_locus_tag=YPZ3_0995 NC_014029.1 Protein Homology CDS 1287709 1288596 . - 0 ID=cds1157;Parent=gene1176;Dbxref=Genbank:WP_002210710.1;Name=WP_002210710.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210710.1;transl_table=11 NC_014029.1 RefSeq gene 1288618 1288941 . - . ID=gene1177;Name=YPZ3_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05900 NC_014029.1 Protein Homology CDS 1288618 1288941 . - 0 ID=cds1158;Parent=gene1177;Dbxref=Genbank:WP_011566205.1;Name=WP_011566205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011566205.1;transl_table=11 NC_014029.1 RefSeq gene 1289000 1289173 . - . ID=gene1178;Name=YPZ3_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05905 NC_014029.1 Protein Homology CDS 1289000 1289173 . - 0 ID=cds1159;Parent=gene1178;Dbxref=Genbank:WP_002215947.1;Name=WP_002215947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215947.1;transl_table=11 NC_014029.1 RefSeq gene 1289404 1289631 . + . ID=gene1179;Name=YPZ3_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05910 NC_014029.1 Protein Homology CDS 1289404 1289631 . + 0 ID=cds1160;Parent=gene1179;Dbxref=Genbank:WP_002215946.1;Name=WP_002215946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215946.1;transl_table=11 NC_014029.1 RefSeq gene 1289793 1291463 . - . ID=gene1180;Name=YPZ3_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05915;old_locus_tag=YPZ3_0996 NC_014029.1 Protein Homology CDS 1289793 1291463 . - 0 ID=cds1161;Parent=gene1180;Dbxref=Genbank:WP_002215945.1;Name=WP_002215945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215945.1;transl_table=11 NC_014029.1 RefSeq gene 1291514 1292602 . - . ID=gene1181;Name=YPZ3_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05920;old_locus_tag=YPZ3_0997 NC_014029.1 Protein Homology CDS 1291514 1292602 . - 0 ID=cds1162;Parent=gene1181;Dbxref=Genbank:WP_002210712.1;Name=WP_002210712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210712.1;transl_table=11 NC_014029.1 RefSeq gene 1292681 1293880 . - . ID=gene1182;Name=YPZ3_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05925;old_locus_tag=YPZ3_0998 NC_014029.1 Protein Homology CDS 1292681 1293880 . - 0 ID=cds1163;Parent=gene1182;Dbxref=Genbank:WP_002210713.1;Name=WP_002210713.1;gbkey=CDS;product=integrase;protein_id=WP_002210713.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1293992 1294714 . + . ID=id103;gbkey=repeat_region NC_014029.1 RefSeq gene 1294104 1294562 . - . ID=gene1183;Name=YPZ3_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05930;old_locus_tag=YPZ3_0999 NC_014029.1 Protein Homology CDS 1294104 1294562 . - 0 ID=cds1164;Parent=gene1183;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1294552 1294752 . - . ID=gene1184;Name=YPZ3_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05935 NC_014029.1 Protein Homology CDS 1294552 1294752 . - 0 ID=cds1165;Parent=gene1184;Dbxref=Genbank:WP_002215944.1;Name=WP_002215944.1;gbkey=CDS;product=invasin;protein_id=WP_002215944.1;transl_table=11 NC_014029.1 RefSeq gene 1295197 1295679 . - . ID=gene1185;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YPZ3_RS05940;old_locus_tag=YPZ3_1000 NC_014029.1 Protein Homology CDS 1295197 1295679 . - 0 ID=cds1166;Parent=gene1185;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11 NC_014029.1 RefSeq gene 1295840 1296274 . + . ID=gene1186;Name=YPZ3_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05945;old_locus_tag=YPZ3_1001 NC_014029.1 Protein Homology CDS 1295840 1296274 . + 0 ID=cds1167;Parent=gene1186;Dbxref=Genbank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210715.1;transl_table=11 NC_014029.1 RefSeq gene 1296267 1296551 . + . ID=gene1187;Name=YPZ3_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05950 NC_014029.1 Protein Homology CDS 1296267 1296551 . + 0 ID=cds1168;Parent=gene1187;Dbxref=Genbank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;product=protein RnfH;protein_id=WP_002210716.1;transl_table=11 NC_014029.1 RefSeq gene 1296701 1297042 . - . ID=gene1188;Name=YPZ3_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05955;old_locus_tag=YPZ3_1002 NC_014029.1 Protein Homology CDS 1296701 1297042 . - 0 ID=cds1169;Parent=gene1188;Dbxref=Genbank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_002210717.1;transl_table=11 NC_014029.1 RefSeq gene 1297156 1298817 . - . ID=gene1189;Name=YPZ3_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05960;old_locus_tag=YPZ3_1003 NC_014029.1 Protein Homology CDS 1297156 1298817 . - 0 ID=cds1170;Parent=gene1189;Dbxref=Genbank:WP_002210718.1;Name=WP_002210718.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_002210718.1;transl_table=11 NC_014029.1 RefSeq gene 1298904 1299785 . - . ID=gene1190;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=YPZ3_RS05965;old_locus_tag=YPZ3_1004 NC_014029.1 Protein Homology CDS 1298904 1299785 . - 0 ID=cds1171;Parent=gene1190;Dbxref=Genbank:WP_002210719.1;Name=WP_002210719.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_002210719.1;transl_table=11 NC_014029.1 RefSeq gene 1299909 1300487 . + . ID=gene1191;Name=YPZ3_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05970;old_locus_tag=YPZ3_1005 NC_014029.1 Protein Homology CDS 1299909 1300487 . + 0 ID=cds1172;Parent=gene1191;Dbxref=Genbank:WP_002210720.1;Name=WP_002210720.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002210720.1;transl_table=11 NC_014029.1 RefSeq gene 1300595 1301875 . - . ID=gene1192;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=YPZ3_RS05975;old_locus_tag=YPZ3_1006 NC_014029.1 Protein Homology CDS 1300595 1301875 . - 0 ID=cds1173;Parent=gene1192;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11 NC_014029.1 RefSeq gene 1302585 1302974 . + . ID=gene1193;Name=YPZ3_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS05980 NC_014029.1 Protein Homology CDS 1302585 1302974 . + 0 ID=cds1174;Parent=gene1193;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11 NC_014029.1 RefSeq gene 1302968 1303315 . + . ID=gene1194;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YPZ3_RS05985;old_locus_tag=YPZ3_1007 NC_014029.1 Protein Homology CDS 1302968 1303315 . + 0 ID=cds1175;Parent=gene1194;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11 NC_014029.1 RefSeq gene 1303316 1305082 . + . ID=gene1195;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YPZ3_RS05990;old_locus_tag=YPZ3_1008 NC_014029.1 Protein Homology CDS 1303316 1305082 . + 0 ID=cds1176;Parent=gene1195;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NC_014029.1 RefSeq gene 1305132 1305848 . + . ID=gene1196;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YPZ3_RS05995;old_locus_tag=YPZ3_1009 NC_014029.1 Protein Homology CDS 1305132 1305848 . + 0 ID=cds1177;Parent=gene1196;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NC_014029.1 RefSeq gene 1306204 1309011 . + . ID=gene1197;Name=YPZ3_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06000;old_locus_tag=YPZ3_1010 NC_014029.1 Protein Homology CDS 1306204 1309011 . + 0 ID=cds1178;Parent=gene1197;Dbxref=Genbank:WP_002210726.1;Name=WP_002210726.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=WP_002210726.1;transl_table=11 NC_014029.1 RefSeq gene 1309041 1310264 . + . ID=gene1198;Name=YPZ3_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06005;old_locus_tag=YPZ3_1011 NC_014029.1 Protein Homology CDS 1309041 1310264 . + 0 ID=cds1179;Parent=gene1198;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NC_014029.1 RefSeq gene 1310377 1311543 . + . ID=gene1199;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YPZ3_RS06010;old_locus_tag=YPZ3_1012 NC_014029.1 Protein Homology CDS 1310377 1311543 . + 0 ID=cds1180;Parent=gene1199;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NC_014029.1 RefSeq gene 1311543 1312415 . + . ID=gene1200;Name=YPZ3_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06015;old_locus_tag=YPZ3_1013 NC_014029.1 Protein Homology CDS 1311543 1312415 . + 0 ID=cds1181;Parent=gene1200;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NC_014029.1 RefSeq gene 1313182 1314750 . + . ID=gene1201;Name=YPZ3_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06020;old_locus_tag=YPZ3_1014 NC_014029.1 Protein Homology CDS 1313182 1314750 . + 0 ID=cds1182;Parent=gene1201;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NC_014029.1 RefSeq gene 1314765 1315904 . + . ID=gene1202;Name=YPZ3_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06025;old_locus_tag=YPZ3_1015 NC_014029.1 Protein Homology CDS 1314765 1315904 . + 0 ID=cds1183;Parent=gene1202;Dbxref=Genbank:WP_002210731.1;Name=WP_002210731.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NC_014029.1 RefSeq gene 1315917 1316051 . + . ID=gene1203;Name=YPZ3_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06030 NC_014029.1 Protein Homology CDS 1315917 1316051 . + 0 ID=cds1184;Parent=gene1203;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11 NC_014029.1 RefSeq gene 1316041 1316328 . + . ID=gene1204;Name=YPZ3_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06035 NC_014029.1 Protein Homology CDS 1316041 1316328 . + 0 ID=cds1185;Parent=gene1204;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11 NC_014029.1 RefSeq gene 1316460 1316861 . + . ID=gene1205;Name=YPZ3_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06040 NC_014029.1 Protein Homology CDS 1316460 1316861 . + 0 ID=cds1186;Parent=gene1205;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11 NC_014029.1 RefSeq gene 1316861 1317547 . + . ID=gene1206;Name=YPZ3_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06045;old_locus_tag=YPZ3_1016 NC_014029.1 Protein Homology CDS 1316861 1317547 . + 0 ID=cds1187;Parent=gene1206;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11 NC_014029.1 RefSeq gene 1317560 1317988 . + . ID=gene1207;Name=YPZ3_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06050;old_locus_tag=YPZ3_1017 NC_014029.1 Protein Homology CDS 1317560 1317988 . + 0 ID=cds1188;Parent=gene1207;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11 NC_014029.1 RefSeq gene 1318100 1319266 . + . ID=gene1208;Name=YPZ3_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06055;old_locus_tag=YPZ3_1018 NC_014029.1 Protein Homology CDS 1318100 1319266 . + 0 ID=cds1189;Parent=gene1208;Dbxref=Genbank:WP_002210737.1;Name=WP_002210737.1;gbkey=CDS;product=cell envelope integrity/translocation protein TolA;protein_id=WP_002210737.1;transl_table=11 NC_014029.1 RefSeq gene 1319386 1320678 . + . ID=gene1209;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YPZ3_RS06060;old_locus_tag=YPZ3_1019 NC_014029.1 Protein Homology CDS 1319386 1320678 . + 0 ID=cds1190;Parent=gene1209;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11 NC_014029.1 RefSeq gene 1320729 1321235 . + . ID=gene1210;Name=YPZ3_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06065;old_locus_tag=YPZ3_1020 NC_014029.1 Protein Homology CDS 1320729 1321235 . + 0 ID=cds1191;Parent=gene1210;Dbxref=Genbank:WP_002210739.1;Name=WP_002210739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210739.1;transl_table=11 NC_014029.1 RefSeq gene 1321245 1322054 . + . ID=gene1211;Name=YPZ3_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06070;old_locus_tag=YPZ3_1021 NC_014029.1 Protein Homology CDS 1321245 1322054 . + 0 ID=cds1192;Parent=gene1211;Dbxref=Genbank:WP_002210740.1;Name=WP_002210740.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=WP_002210740.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1322245 1322508 . + . ID=id104;gbkey=repeat_region NC_014029.1 RefSeq gene 1322245 1322320 . + . ID=gene1212;Name=YPZ3_RS06075;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS06075;old_locus_tag=YPZ3_t13 NC_014029.1 tRNAscan-SE tRNA 1322245 1322320 . + . ID=rna18;Parent=gene1212;anticodon=(pos:1322278..1322280);gbkey=tRNA;product=tRNA-Lys NC_014029.1 tRNAscan-SE exon 1322245 1322320 . + . ID=id105;Parent=rna18;anticodon=(pos:1322278..1322280);gbkey=tRNA;product=tRNA-Lys NC_014029.1 RefSeq gene 1322348 1322423 . + . ID=gene1213;Name=YPZ3_RS06080;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS06080;old_locus_tag=YPZ3_t14 NC_014029.1 tRNAscan-SE tRNA 1322348 1322423 . + . ID=rna19;Parent=gene1213;anticodon=(pos:1322381..1322383);gbkey=tRNA;product=tRNA-Lys NC_014029.1 tRNAscan-SE exon 1322348 1322423 . + . ID=id106;Parent=rna19;anticodon=(pos:1322381..1322383);gbkey=tRNA;product=tRNA-Lys NC_014029.1 RefSeq gene 1322571 1322813 . - . ID=gene1214;Name=YPZ3_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06085 NC_014029.1 Protein Homology CDS 1322571 1322813 . - 0 ID=cds1193;Parent=gene1214;Dbxref=Genbank:WP_002217022.1;Name=WP_002217022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217022.1;transl_table=11 NC_014029.1 RefSeq gene 1322890 1323951 . + . ID=gene1215;Name=YPZ3_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06090;old_locus_tag=YPZ3_1022 NC_014029.1 Protein Homology CDS 1322890 1323951 . + 0 ID=cds1194;Parent=gene1215;Dbxref=Genbank:WP_002210741.1;Name=WP_002210741.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002210741.1;transl_table=11 NC_014029.1 RefSeq gene 1324073 1324798 . + . ID=gene1216;Name=YPZ3_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06095;old_locus_tag=YPZ3_1023 NC_014029.1 Protein Homology CDS 1324073 1324798 . + 0 ID=cds1195;Parent=gene1216;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NC_014029.1 RefSeq gene 1324913 1325851 . - . ID=gene1217;Name=YPZ3_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06100;old_locus_tag=YPZ3_1024 NC_014029.1 Protein Homology CDS 1324913 1325851 . - 0 ID=cds1196;Parent=gene1217;Dbxref=Genbank:WP_002210743.1;Name=WP_002210743.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_002210743.1;transl_table=11 NC_014029.1 RefSeq gene 1326300 1327316 . + . ID=gene1218;Name=YPZ3_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06105;old_locus_tag=YPZ3_1025 NC_014029.1 Protein Homology CDS 1326300 1327316 . + 0 ID=cds1197;Parent=gene1218;Dbxref=Genbank:WP_002210744.1;Name=WP_002210744.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002210744.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1327257 1329217 . + . ID=id107;gbkey=repeat_region NC_014029.1 RefSeq gene 1327326 1328105 . - . ID=gene1219;Name=YPZ3_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06110;old_locus_tag=YPZ3_1026 NC_014029.1 Protein Homology CDS 1327326 1328105 . - 0 ID=cds1198;Parent=gene1219;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 1328105 1329127 . - . ID=gene1220;Name=YPZ3_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06115;old_locus_tag=YPZ3_1027 NC_014029.1 Protein Homology CDS 1328105 1329127 . - 0 ID=cds1199;Parent=gene1220;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 1329186 1329311 . + . ID=gene1221;Name=YPZ3_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06120 NC_014029.1 Protein Homology CDS 1329186 1329311 . + 0 ID=cds1200;Parent=gene1221;Dbxref=Genbank:WP_002210745.1;Name=WP_002210745.1;gbkey=CDS;product=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase;protein_id=WP_002210745.1;transl_table=11 NC_014029.1 RefSeq gene 1329493 1330245 . - . ID=gene1222;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YPZ3_RS06125;old_locus_tag=YPZ3_1028 NC_014029.1 Protein Homology CDS 1329493 1330245 . - 0 ID=cds1201;Parent=gene1222;Dbxref=Genbank:WP_002210746.1;Name=WP_002210746.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NC_014029.1 RefSeq gene 1330592 1330927 . - . ID=gene1223;Name=YPZ3_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06130;old_locus_tag=YPZ3_1029 NC_014029.1 Protein Homology CDS 1330592 1330927 . - 0 ID=cds1202;Parent=gene1223;Dbxref=Genbank:WP_002210747.1;Name=WP_002210747.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_002210747.1;transl_table=11 NC_014029.1 RefSeq gene 1331220 1332116 . - . ID=gene1224;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YPZ3_RS06135;old_locus_tag=YPZ3_1030 NC_014029.1 Protein Homology CDS 1331220 1332116 . - 0 ID=cds1203;Parent=gene1224;Dbxref=Genbank:WP_002216812.1;Name=WP_002216812.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_002216812.1;transl_table=11 NC_014029.1 RefSeq gene 1332137 1332289 . - . ID=gene1225;Name=YPZ3_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06140 NC_014029.1 Protein Homology CDS 1332137 1332289 . - 0 ID=cds1204;Parent=gene1225;Dbxref=Genbank:WP_002216814.1;Name=WP_002216814.1;gbkey=CDS;product=aldose 1-epimerase;protein_id=WP_002216814.1;transl_table=11 NC_014029.1 RefSeq gene 1332283 1333434 . - . ID=gene1226;Name=YPZ3_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06145;old_locus_tag=YPZ3_1031 NC_014029.1 Protein Homology CDS 1332283 1333434 . - 0 ID=cds1205;Parent=gene1226;Dbxref=Genbank:WP_002210748.1;Name=WP_002210748.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NC_014029.1 RefSeq gene 1333431 1334483 . - . ID=gene1227;Name=YPZ3_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06150;old_locus_tag=YPZ3_1032 NC_014029.1 Protein Homology CDS 1333431 1334483 . - 0 ID=cds1206;Parent=gene1227;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NC_014029.1 RefSeq gene 1334493 1335509 . - . ID=gene1228;Name=YPZ3_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06155;old_locus_tag=YPZ3_1033 NC_014029.1 Protein Homology CDS 1334493 1335509 . - 0 ID=cds1207;Parent=gene1228;Dbxref=Genbank:WP_002210750.1;Name=WP_002210750.1;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=WP_002210750.1;transl_table=11 NC_014029.1 RefSeq gene 1335869 1336687 . - . ID=gene1229;Name=YPZ3_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06160;old_locus_tag=YPZ3_1034 NC_014029.1 Protein Homology CDS 1335869 1336687 . - 0 ID=cds1208;Parent=gene1229;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11 NC_014029.1 RefSeq gene 1336742 1336870 . - . ID=gene1230;Name=YPZ3_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06165 NC_014029.1 Protein Homology CDS 1336742 1336870 . - 0 ID=cds1209;Parent=gene1230;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11 NC_014029.1 RefSeq gene 1336904 1338394 . - . ID=gene1231;Name=YPZ3_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06170;old_locus_tag=YPZ3_1035 NC_014029.1 Protein Homology CDS 1336904 1338394 . - 0 ID=cds1210;Parent=gene1231;Dbxref=Genbank:WP_002210753.1;Name=WP_002210753.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_002210753.1;transl_table=11 NC_014029.1 RefSeq gene 1338504 1339295 . - . ID=gene1232;Name=YPZ3_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06175;old_locus_tag=YPZ3_1036 NC_014029.1 Protein Homology CDS 1338504 1339295 . - 0 ID=cds1211;Parent=gene1232;Dbxref=Genbank:WP_002210754.1;Name=WP_002210754.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_002210754.1;transl_table=11 NC_014029.1 RefSeq gene 1339612 1339764 . + . ID=gene1233;Name=YPZ3_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06180 NC_014029.1 Protein Homology CDS 1339612 1339764 . + 0 ID=cds1212;Parent=gene1233;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11 NC_014029.1 RefSeq gene 1339999 1340778 . + . ID=gene1234;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YPZ3_RS06185;old_locus_tag=YPZ3_1037 NC_014029.1 Protein Homology CDS 1339999 1340778 . + 0 ID=cds1213;Parent=gene1234;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NC_014029.1 RefSeq gene 1340778 1341473 . + . ID=gene1235;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YPZ3_RS06190;old_locus_tag=YPZ3_1038 NC_014029.1 Protein Homology CDS 1340778 1341473 . + 0 ID=cds1214;Parent=gene1235;Dbxref=Genbank:WP_002210757.1;Name=WP_002210757.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_002210757.1;transl_table=11 NC_014029.1 RefSeq gene 1341467 1342546 . + . ID=gene1236;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YPZ3_RS06195;old_locus_tag=YPZ3_1039 NC_014029.1 Protein Homology CDS 1341467 1342546 . + 0 ID=cds1215;Parent=gene1236;Dbxref=Genbank:WP_002210758.1;Name=WP_002210758.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_002210758.1;transl_table=11 NC_014029.1 RefSeq gene 1342602 1343423 . - . ID=gene1237;Name=YPZ3_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06200;old_locus_tag=YPZ3_1040 NC_014029.1 Protein Homology CDS 1342602 1343423 . - 0 ID=cds1216;Parent=gene1237;Dbxref=Genbank:WP_002210759.1;Name=WP_002210759.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_002210759.1;transl_table=11 NC_014029.1 RefSeq gene 1343714 1344718 . + . ID=gene1238;Name=YPZ3_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06205;old_locus_tag=YPZ3_1041 NC_014029.1 Protein Homology CDS 1343714 1344718 . + 0 ID=cds1217;Parent=gene1238;Dbxref=Genbank:WP_002210760.1;Name=WP_002210760.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_002210760.1;transl_table=11 NC_014029.1 RefSeq gene 1344903 1346183 . - . ID=gene1239;Name=YPZ3_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06210;old_locus_tag=YPZ3_1042 NC_014029.1 Protein Homology CDS 1344903 1346183 . - 0 ID=cds1218;Parent=gene1239;Dbxref=Genbank:WP_002220188.1;Name=WP_002220188.1;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_002220188.1;transl_table=11 NC_014029.1 RefSeq gene 1346282 1347319 . + . ID=gene1240;Name=YPZ3_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06215;old_locus_tag=YPZ3_1043 NC_014029.1 Protein Homology CDS 1346282 1347319 . + 0 ID=cds1219;Parent=gene1240;Dbxref=Genbank:WP_002210762.1;Name=WP_002210762.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_002210762.1;transl_table=11 NC_014029.1 RefSeq gene 1347319 1348470 . + . ID=gene1241;Name=YPZ3_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06220;old_locus_tag=YPZ3_1044 NC_014029.1 Protein Homology CDS 1347319 1348470 . + 0 ID=cds1220;Parent=gene1241;Dbxref=Genbank:WP_002210763.1;Name=WP_002210763.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_002210763.1;transl_table=11 NC_014029.1 RefSeq gene 1348454 1349257 . + . ID=gene1242;Name=YPZ3_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06225;old_locus_tag=YPZ3_1045 NC_014029.1 Protein Homology CDS 1348454 1349257 . + 0 ID=cds1221;Parent=gene1242;Dbxref=Genbank:WP_002210764.1;Name=WP_002210764.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_002210764.1;transl_table=11 NC_014029.1 RefSeq gene 1349250 1349972 . + . ID=gene1243;Name=YPZ3_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06230;old_locus_tag=YPZ3_1046 NC_014029.1 Protein Homology CDS 1349250 1349972 . + 0 ID=cds1222;Parent=gene1243;Dbxref=Genbank:WP_002216554.1;Name=WP_002216554.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002216554.1;transl_table=11 NC_014029.1 RefSeq gene 1350124 1350834 . - . ID=gene1244;Name=YPZ3_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06235;old_locus_tag=YPZ3_1047 NC_014029.1 Protein Homology CDS 1350124 1350834 . - 0 ID=cds1223;Parent=gene1244;Dbxref=Genbank:WP_002210766.1;Name=WP_002210766.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210766.1;transl_table=11 NC_014029.1 RefSeq gene 1351924 1353939 . + . ID=gene1245;Name=YPZ3_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06240;old_locus_tag=YPZ3_1048 NC_014029.1 Protein Homology CDS 1351924 1353939 . + 0 ID=cds1224;Parent=gene1245;Dbxref=Genbank:WP_002210767.1;Name=WP_002210767.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_002210767.1;transl_table=11 NC_014029.1 RefSeq gene 1354231 1354476 . + . ID=gene1246;Name=YPZ3_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06245 NC_014029.1 Protein Homology CDS 1354231 1354476 . + 0 ID=cds1225;Parent=gene1246;Dbxref=Genbank:WP_002210768.1;Name=WP_002210768.1;gbkey=CDS;product=transporter;protein_id=WP_002210768.1;transl_table=11 NC_014029.1 RefSeq gene 1354607 1355530 . - . ID=gene1247;Name=YPZ3_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06250;old_locus_tag=YPZ3_1049 NC_014029.1 Protein Homology CDS 1354607 1355530 . - 0 ID=cds1226;Parent=gene1247;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11 NC_014029.1 RefSeq gene 1355664 1355810 . - . ID=gene1248;Name=YPZ3_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06255 NC_014029.1 Protein Homology CDS 1355664 1355810 . - 0 ID=cds1227;Parent=gene1248;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11 NC_014029.1 RefSeq gene 1356062 1357042 . + . ID=gene1249;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YPZ3_RS06260;old_locus_tag=YPZ3_1050 NC_014029.1 Protein Homology CDS 1356062 1357042 . + 0 ID=cds1228;Parent=gene1249;Dbxref=Genbank:WP_002210771.1;Name=WP_002210771.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_002210771.1;transl_table=11 NC_014029.1 RefSeq gene 1357143 1357622 . + . ID=gene1250;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YPZ3_RS06265;old_locus_tag=YPZ3_1051 NC_014029.1 Protein Homology CDS 1357143 1357622 . + 0 ID=cds1229;Parent=gene1250;Dbxref=Genbank:WP_002210772.1;Name=WP_002210772.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_002210772.1;transl_table=11 NC_014029.1 RefSeq gene 1357619 1357864 . + . ID=gene1251;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YPZ3_RS06270 NC_014029.1 Protein Homology CDS 1357619 1357864 . + 0 ID=cds1230;Parent=gene1251;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11 NC_014029.1 RefSeq gene 1357867 1358319 . + . ID=gene1252;Name=YPZ3_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06275;old_locus_tag=YPZ3_1052 NC_014029.1 Protein Homology CDS 1357867 1358319 . + 0 ID=cds1231;Parent=gene1252;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11 NC_014029.1 RefSeq gene 1358463 1359173 . + . ID=gene1253;Name=YPZ3_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06280;old_locus_tag=YPZ3_1053 NC_014029.1 Protein Homology CDS 1358463 1359173 . + 0 ID=cds1232;Parent=gene1253;Dbxref=Genbank:WP_002210775.1;Name=WP_002210775.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210775.1;transl_table=11 NC_014029.1 RefSeq gene 1359248 1359418 . + . ID=gene1254;Name=YPZ3_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06285 NC_014029.1 Protein Homology CDS 1359248 1359418 . + 0 ID=cds1233;Parent=gene1254;Dbxref=Genbank:WP_025470755.1;Name=WP_025470755.1;gbkey=CDS;product=transposase;protein_id=WP_025470755.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1359255 1359978 . + . ID=id108;gbkey=repeat_region NC_014029.1 RefSeq gene 1359408 1359866 . + . ID=gene1255;Name=YPZ3_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06290;old_locus_tag=YPZ3_1054 NC_014029.1 Protein Homology CDS 1359408 1359866 . + 0 ID=cds1234;Parent=gene1255;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1360095 1361798 . - . ID=gene1256;Name=YPZ3_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06295;old_locus_tag=YPZ3_1055 NC_014029.1 Protein Homology CDS 1360095 1361798 . - 0 ID=cds1235;Parent=gene1256;Dbxref=Genbank:WP_002220180.1;Name=WP_002220180.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=oxygen-dependent choline dehydrogenase;protein_id=WP_002220180.1;transl_table=11 NC_014029.1 RefSeq gene 1361821 1363293 . - . ID=gene1257;Name=YPZ3_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06300;old_locus_tag=YPZ3_1056 NC_014029.1 Protein Homology CDS 1361821 1363293 . - 0 ID=cds1236;Parent=gene1257;Dbxref=Genbank:WP_002218281.1;Name=WP_002218281.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_002218281.1;transl_table=11 NC_014029.1 RefSeq gene 1363351 1363947 . - . ID=gene1258;Name=YPZ3_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06305;old_locus_tag=YPZ3_1057 NC_014029.1 Protein Homology CDS 1363351 1363947 . - 0 ID=cds1237;Parent=gene1258;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11 NC_014029.1 RefSeq gene 1364312 1366360 . + . ID=gene1259;Name=YPZ3_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06310;old_locus_tag=YPZ3_1058 NC_014029.1 Protein Homology CDS 1364312 1366360 . + 0 ID=cds1238;Parent=gene1259;Dbxref=Genbank:WP_002228035.1;Name=WP_002228035.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_002228035.1;transl_table=11 NC_014029.1 RefSeq gene 1366592 1367485 . + . ID=gene1260;Name=YPZ3_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06315;old_locus_tag=YPZ3_1059 NC_014029.1 Protein Homology CDS 1366592 1367485 . + 0 ID=cds1239;Parent=gene1260;Dbxref=Genbank:WP_002214199.1;Name=WP_002214199.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214199.1;transl_table=11 NC_014029.1 RefSeq gene 1367523 1368371 . - . ID=gene1261;Name=YPZ3_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06320;old_locus_tag=YPZ3_1060 NC_014029.1 Protein Homology CDS 1367523 1368371 . - 0 ID=cds1240;Parent=gene1261;Dbxref=Genbank:WP_002214197.1;Name=WP_002214197.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002214197.1;transl_table=11 NC_014029.1 RefSeq gene 1368717 1369580 . + . ID=gene1262;Name=YPZ3_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06325;old_locus_tag=YPZ3_1061 NC_014029.1 Protein Homology CDS 1368717 1369580 . + 0 ID=cds1241;Parent=gene1262;Dbxref=Genbank:WP_002214195.1;Name=WP_002214195.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_002214195.1;transl_table=11 NC_014029.1 RefSeq gene 1369719 1370363 . + . ID=gene1263;Name=YPZ3_RS06330;end_range=1370363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS06330;old_locus_tag=YPZ3_1062;partial=true;pseudo=true NC_014029.1 Protein Homology CDS 1369719 1370363 . + 0 ID=cds1242;Parent=gene1263;end_range=1370363,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;transl_table=11 NC_014029.1 RefSeq repeat_region 1370358 1371079 . + . ID=id109;gbkey=repeat_region NC_014029.1 RefSeq gene 1370509 1370967 . + . ID=gene1264;Name=YPZ3_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06335;old_locus_tag=YPZ3_1063 NC_014029.1 Protein Homology CDS 1370509 1370967 . + 0 ID=cds1243;Parent=gene1264;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1371068 1371685 . + . ID=gene1265;Name=YPZ3_RS06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS06340;old_locus_tag=YPZ3_1064;partial=true;pseudo=true;start_range=.,1371068 NC_014029.1 Protein Homology CDS 1371068 1371685 . + 0 ID=cds1244;Parent=gene1265;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;start_range=.,1371068;transl_table=11 NC_014029.1 RefSeq gene 1371773 1372246 . - . ID=gene1266;Name=YPZ3_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06345;old_locus_tag=YPZ3_1065 NC_014029.1 Protein Homology CDS 1371773 1372246 . - 0 ID=cds1245;Parent=gene1266;Dbxref=Genbank:WP_002220173.1;Name=WP_002220173.1;gbkey=CDS;product=zinc resistance protein;protein_id=WP_002220173.1;transl_table=11 NC_014029.1 RefSeq gene 1372604 1374418 . + . ID=gene1267;Name=YPZ3_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06350;old_locus_tag=YPZ3_1066 NC_014029.1 Protein Homology CDS 1372604 1374418 . + 0 ID=cds1246;Parent=gene1267;Dbxref=Genbank:WP_002220171.1;Name=WP_002220171.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_002220171.1;transl_table=11 NC_014029.1 RefSeq gene 1374405 1375769 . + . ID=gene1268;Name=YPZ3_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06355;old_locus_tag=YPZ3_1067 NC_014029.1 Protein Homology CDS 1374405 1375769 . + 0 ID=cds1247;Parent=gene1268;Dbxref=Genbank:WP_002220170.1;Name=WP_002220170.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_002220170.1;transl_table=11 NC_014029.1 RefSeq gene 1376117 1377226 . + . ID=gene1269;Name=YPZ3_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06360;old_locus_tag=YPZ3_1068 NC_014029.1 Protein Homology CDS 1376117 1377226 . + 0 ID=cds1248;Parent=gene1269;Dbxref=Genbank:WP_002220169.1;Name=WP_002220169.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_002220169.1;transl_table=11 NC_014029.1 RefSeq gene 1377227 1378138 . - . ID=gene1270;Name=YPZ3_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06365;old_locus_tag=YPZ3_1069 NC_014029.1 Protein Homology CDS 1377227 1378138 . - 0 ID=cds1249;Parent=gene1270;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11 NC_014029.1 RefSeq gene 1378693 1378920 . + . ID=gene1271;Name=YPZ3_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06370 NC_014029.1 Protein Homology CDS 1378693 1378920 . + 0 ID=cds1250;Parent=gene1271;Dbxref=Genbank:WP_002220165.1;Name=WP_002220165.1;gbkey=CDS;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_002220165.1;transl_table=11 NC_014029.1 RefSeq gene 1378931 1379257 . + . ID=gene1272;Name=YPZ3_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06375;old_locus_tag=YPZ3_1070 NC_014029.1 Protein Homology CDS 1378931 1379257 . + 0 ID=cds1251;Parent=gene1272;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11 NC_014029.1 RefSeq gene 1379296 1380402 . - . ID=gene1273;Name=YPZ3_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06380;old_locus_tag=YPZ3_1071 NC_014029.1 Protein Homology CDS 1379296 1380402 . - 0 ID=cds1252;Parent=gene1273;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11 NC_014029.1 RefSeq gene 1380415 1381590 . - . ID=gene1274;Name=YPZ3_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06385;old_locus_tag=YPZ3_1072 NC_014029.1 Protein Homology CDS 1380415 1381590 . - 0 ID=cds1253;Parent=gene1274;Dbxref=Genbank:WP_002220159.1;Name=WP_002220159.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220159.1;transl_table=11 NC_014029.1 RefSeq gene 1381595 1383337 . - . ID=gene1275;Name=YPZ3_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06390;old_locus_tag=YPZ3_1073 NC_014029.1 Protein Homology CDS 1381595 1383337 . - 0 ID=cds1254;Parent=gene1275;Dbxref=Genbank:WP_002220158.1;Name=WP_002220158.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002220158.1;transl_table=11 NC_014029.1 RefSeq gene 1383351 1384337 . - . ID=gene1276;Name=YPZ3_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06395;old_locus_tag=YPZ3_1074 NC_014029.1 Protein Homology CDS 1383351 1384337 . - 0 ID=cds1255;Parent=gene1276;Dbxref=Genbank:WP_002220156.1;Name=WP_002220156.1;gbkey=CDS;product=transporter;protein_id=WP_002220156.1;transl_table=11 NC_014029.1 RefSeq gene 1384389 1385099 . - . ID=gene1277;Name=YPZ3_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06400;old_locus_tag=YPZ3_1075 NC_014029.1 Protein Homology CDS 1384389 1385099 . - 0 ID=cds1256;Parent=gene1277;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NC_014029.1 RefSeq gene 1385490 1386845 . + . ID=gene1278;Name=YPZ3_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06405;old_locus_tag=YPZ3_1076 NC_014029.1 Protein Homology CDS 1385490 1386845 . + 0 ID=cds1257;Parent=gene1278;Dbxref=Genbank:WP_002220152.1;Name=WP_002220152.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_002220152.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1385852 1386907 . + . ID=id110;gbkey=repeat_region NC_014029.1 RefSeq gene 1386975 1387241 . + . ID=gene1279;Name=YPZ3_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06410 NC_014029.1 Protein Homology CDS 1386975 1387241 . + 0 ID=cds1258;Parent=gene1279;Dbxref=Genbank:WP_002228622.1;Name=WP_002228622.1;gbkey=CDS;product=transposase;protein_id=WP_002228622.1;transl_table=11 NC_014029.1 RefSeq gene 1387297 1387530 . + . ID=gene1280;Name=YPZ3_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06415 NC_014029.1 Protein Homology CDS 1387297 1387530 . + 0 ID=cds1259;Parent=gene1280;Dbxref=Genbank:WP_002228621.1;Name=WP_002228621.1;gbkey=CDS;product=transposase;protein_id=WP_002228621.1;transl_table=11 NC_014029.1 RefSeq gene 1388059 1388259 . + . ID=gene1281;Name=YPZ3_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22150 NC_014029.1 Protein Homology CDS 1388059 1388259 . + 0 ID=cds1260;Parent=gene1281;Dbxref=Genbank:WP_011566265.1;Name=WP_011566265.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011566265.1;transl_table=11 NC_014029.1 RefSeq gene 1388293 1388619 . + . ID=gene1282;Name=YPZ3_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22155 NC_014029.1 Protein Homology CDS 1388293 1388619 . + 0 ID=cds1261;Parent=gene1282;Dbxref=Genbank:WP_016256670.1;Name=WP_016256670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256670.1;transl_table=11 NC_014029.1 RefSeq gene 1388760 1388996 . + . ID=gene1283;Name=YPZ3_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22160 NC_014029.1 Protein Homology CDS 1388760 1388996 . + 0 ID=cds1262;Parent=gene1283;Dbxref=Genbank:WP_002228617.1;Name=WP_002228617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228617.1;transl_table=11 NC_014029.1 RefSeq gene 1389080 1389394 . + . ID=gene1284;Name=YPZ3_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06425 NC_014029.1 Protein Homology CDS 1389080 1389394 . + 0 ID=cds1263;Parent=gene1284;Dbxref=Genbank:WP_002223532.1;Name=WP_002223532.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223532.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1389495 1390816 . + . ID=id111;gbkey=repeat_region NC_014029.1 RefSeq gene 1389569 1390777 . + . ID=gene1285;Name=YPZ3_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06430;old_locus_tag=YPZ3_1078 NC_014029.1 Protein Homology CDS 1389569 1390777 . + 0 ID=cds1264;Parent=gene1285;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 1390869 1391459 . + . ID=gene1286;Name=YPZ3_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06435;old_locus_tag=YPZ3_1079 NC_014029.1 Protein Homology CDS 1390869 1391459 . + 0 ID=cds1265;Parent=gene1286;Dbxref=Genbank:WP_002228614.1;Name=WP_002228614.1;gbkey=CDS;product=transposase;protein_id=WP_002228614.1;transl_table=11 NC_014029.1 RefSeq gene 1391377 1392378 . + . ID=gene1287;Name=YPZ3_RS06440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS06440;old_locus_tag=YPZ3_1080;partial=true;pseudo=true;start_range=.,1391377 NC_014029.1 Protein Homology CDS 1391377 1392378 . + 0 ID=cds1266;Parent=gene1287;Note=this helicase is not essential cell growth;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-dependent RNA helicase RhlE;pseudo=true;start_range=.,1391377;transl_table=11 NC_014029.1 RefSeq repeat_region 1391385 1393159 . + . ID=id112;gbkey=repeat_region NC_014029.1 RefSeq gene 1392444 1392599 . + . ID=gene1288;Name=YPZ3_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06445 NC_014029.1 Protein Homology CDS 1392444 1392599 . + 0 ID=cds1267;Parent=gene1288;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 1392589 1393047 . + . ID=gene1289;Name=YPZ3_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06450;old_locus_tag=YPZ3_1081 NC_014029.1 Protein Homology CDS 1392589 1393047 . + 0 ID=cds1268;Parent=gene1289;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1393462 1394391 . + . ID=gene1290;Name=YPZ3_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06455;old_locus_tag=YPZ3_1082 NC_014029.1 Protein Homology CDS 1393462 1394391 . + 0 ID=cds1269;Parent=gene1290;Dbxref=Genbank:WP_002210776.1;Name=WP_002210776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210776.1;transl_table=11 NC_014029.1 RefSeq gene 1394691 1395629 . + . ID=gene1291;Name=YPZ3_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06460;old_locus_tag=YPZ3_1083 NC_014029.1 Protein Homology CDS 1394691 1395629 . + 0 ID=cds1270;Parent=gene1291;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11 NC_014029.1 RefSeq gene 1395703 1395882 . - . ID=gene1292;Name=YPZ3_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06465 NC_014029.1 Protein Homology CDS 1395703 1395882 . - 0 ID=cds1271;Parent=gene1292;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11 NC_014029.1 RefSeq gene 1396221 1397156 . + . ID=gene1293;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YPZ3_RS06470;old_locus_tag=YPZ3_1084 NC_014029.1 Protein Homology CDS 1396221 1397156 . + 0 ID=cds1272;Parent=gene1293;Dbxref=Genbank:WP_002210780.1;Name=WP_002210780.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_002210780.1;transl_table=11 NC_014029.1 RefSeq gene 1397277 1398989 . - . ID=gene1294;Name=YPZ3_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06475;old_locus_tag=YPZ3_1085 NC_014029.1 Protein Homology CDS 1397277 1398989 . - 0 ID=cds1273;Parent=gene1294;Dbxref=Genbank:WP_002210781.1;Name=WP_002210781.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210781.1;transl_table=11 NC_014029.1 RefSeq gene 1399199 1399738 . + . ID=gene1295;Name=YPZ3_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06480;old_locus_tag=YPZ3_1086 NC_014029.1 Protein Homology CDS 1399199 1399738 . + 0 ID=cds1274;Parent=gene1295;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NC_014029.1 RefSeq gene 1399764 1400105 . - . ID=gene1296;Name=YPZ3_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06485;old_locus_tag=YPZ3_1087 NC_014029.1 Protein Homology CDS 1399764 1400105 . - 0 ID=cds1275;Parent=gene1296;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11 NC_014029.1 RefSeq gene 1400418 1401521 . + . ID=gene1297;Name=YPZ3_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06490;old_locus_tag=YPZ3_1088 NC_014029.1 Protein Homology CDS 1400418 1401521 . + 0 ID=cds1276;Parent=gene1297;Dbxref=Genbank:WP_002210785.1;Name=WP_002210785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210785.1;transl_table=11 NC_014029.1 RefSeq gene 1401706 1401954 . + . ID=gene1298;Name=YPZ3_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06495 NC_014029.1 Protein Homology CDS 1401706 1401954 . + 0 ID=cds1277;Parent=gene1298;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11 NC_014029.1 RefSeq gene 1402162 1402998 . + . ID=gene1299;Name=YPZ3_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06500;old_locus_tag=YPZ3_1089 NC_014029.1 Protein Homology CDS 1402162 1402998 . + 0 ID=cds1278;Parent=gene1299;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11 NC_014029.1 RefSeq gene 1403035 1403964 . + . ID=gene1300;Name=YPZ3_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06505;old_locus_tag=YPZ3_1090 NC_014029.1 Protein Homology CDS 1403035 1403964 . + 0 ID=cds1279;Parent=gene1300;Dbxref=Genbank:WP_002210788.1;Name=WP_002210788.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_002210788.1;transl_table=11 NC_014029.1 RefSeq gene 1404067 1404927 . + . ID=gene1301;Name=YPZ3_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06510;old_locus_tag=YPZ3_1091 NC_014029.1 Protein Homology CDS 1404067 1404927 . + 0 ID=cds1280;Parent=gene1301;Dbxref=Genbank:WP_002210789.1;Name=WP_002210789.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210789.1;transl_table=11 NC_014029.1 RefSeq gene 1404930 1405811 . + . ID=gene1302;Name=YPZ3_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06515;old_locus_tag=YPZ3_1092 NC_014029.1 Protein Homology CDS 1404930 1405811 . + 0 ID=cds1281;Parent=gene1302;Dbxref=Genbank:WP_002210790.1;Name=WP_002210790.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210790.1;transl_table=11 NC_014029.1 RefSeq gene 1406057 1406530 . + . ID=gene1303;Name=YPZ3_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06520;old_locus_tag=YPZ3_1093 NC_014029.1 Protein Homology CDS 1406057 1406530 . + 0 ID=cds1282;Parent=gene1303;Dbxref=Genbank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210791.1;transl_table=11 NC_014029.1 RefSeq gene 1406965 1408233 . + . ID=gene1304;Name=YPZ3_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06525;old_locus_tag=YPZ3_1094 NC_014029.1 Protein Homology CDS 1406965 1408233 . + 0 ID=cds1283;Parent=gene1304;Dbxref=Genbank:WP_002210792.1;Name=WP_002210792.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11 NC_014029.1 RefSeq gene 1408357 1409958 . + . ID=gene1305;Name=YPZ3_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06530;old_locus_tag=YPZ3_1095 NC_014029.1 Protein Homology CDS 1408357 1409958 . + 0 ID=cds1284;Parent=gene1305;Dbxref=Genbank:WP_002210793.1;Name=WP_002210793.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_002210793.1;transl_table=11 NC_014029.1 RefSeq gene 1409958 1411034 . + . ID=gene1306;Name=YPZ3_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06535;old_locus_tag=YPZ3_1096 NC_014029.1 Protein Homology CDS 1409958 1411034 . + 0 ID=cds1285;Parent=gene1306;Dbxref=Genbank:WP_002210794.1;Name=WP_002210794.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002210794.1;transl_table=11 NC_014029.1 RefSeq gene 1411031 1411867 . + . ID=gene1307;Name=YPZ3_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06540;old_locus_tag=YPZ3_1097 NC_014029.1 Protein Homology CDS 1411031 1411867 . + 0 ID=cds1286;Parent=gene1307;Dbxref=Genbank:WP_002210795.1;Name=WP_002210795.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210795.1;transl_table=11 NC_014029.1 RefSeq gene 1411961 1412659 . + . ID=gene1308;Name=YPZ3_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06545;old_locus_tag=YPZ3_1098 NC_014029.1 Protein Homology CDS 1411961 1412659 . + 0 ID=cds1287;Parent=gene1308;Dbxref=Genbank:WP_002223523.1;Name=WP_002223523.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002223523.1;transl_table=11 NC_014029.1 RefSeq gene 1412774 1413631 . + . ID=gene1309;Name=YPZ3_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06550;old_locus_tag=YPZ3_1099 NC_014029.1 Protein Homology CDS 1412774 1413631 . + 0 ID=cds1288;Parent=gene1309;Dbxref=Genbank:WP_002210797.1;Name=WP_002210797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210797.1;transl_table=11 NC_014029.1 RefSeq gene 1413655 1415070 . + . ID=gene1310;Name=YPZ3_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06555;old_locus_tag=YPZ3_1100 NC_014029.1 Protein Homology CDS 1413655 1415070 . + 0 ID=cds1289;Parent=gene1310;Dbxref=Genbank:WP_002210798.1;Name=WP_002210798.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_002210798.1;transl_table=11 NC_014029.1 RefSeq gene 1415267 1416121 . - . ID=gene1311;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YPZ3_RS06560;old_locus_tag=YPZ3_1101 NC_014029.1 Protein Homology CDS 1415267 1416121 . - 0 ID=cds1290;Parent=gene1311;Dbxref=Genbank:WP_002210799.1;Name=WP_002210799.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002210799.1;transl_table=11 NC_014029.1 RefSeq gene 1416857 1417324 . + . ID=gene1312;Name=YPZ3_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06565;old_locus_tag=YPZ3_1102 NC_014029.1 Protein Homology CDS 1416857 1417324 . + 0 ID=cds1291;Parent=gene1312;Dbxref=Genbank:WP_002214183.1;Name=WP_002214183.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214183.1;transl_table=11 NC_014029.1 RefSeq gene 1417469 1417789 . + . ID=gene1313;Name=YPZ3_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06570;old_locus_tag=YPZ3_1103 NC_014029.1 Protein Homology CDS 1417469 1417789 . + 0 ID=cds1292;Parent=gene1313;Dbxref=Genbank:WP_002214181.1;Name=WP_002214181.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214181.1;transl_table=11 NC_014029.1 RefSeq gene 1418050 1419204 . + . ID=gene1314;Name=YPZ3_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06575;old_locus_tag=YPZ3_1104 NC_014029.1 Protein Homology CDS 1418050 1419204 . + 0 ID=cds1293;Parent=gene1314;Dbxref=Genbank:WP_002210801.1;Name=WP_002210801.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210801.1;transl_table=11 NC_014029.1 RefSeq gene 1419201 1420139 . + . ID=gene1315;Name=YPZ3_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06580;old_locus_tag=YPZ3_1105 NC_014029.1 Protein Homology CDS 1419201 1420139 . + 0 ID=cds1294;Parent=gene1315;Dbxref=Genbank:WP_002210802.1;Name=WP_002210802.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210802.1;transl_table=11 NC_014029.1 RefSeq gene 1420136 1420972 . + . ID=gene1316;Name=YPZ3_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06585;old_locus_tag=YPZ3_1106 NC_014029.1 Protein Homology CDS 1420136 1420972 . + 0 ID=cds1295;Parent=gene1316;Dbxref=Genbank:WP_002210803.1;Name=WP_002210803.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210803.1;transl_table=11 NC_014029.1 RefSeq gene 1421450 1422784 . + . ID=gene1317;Name=YPZ3_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06590;old_locus_tag=YPZ3_1107 NC_014029.1 Protein Homology CDS 1421450 1422784 . + 0 ID=cds1296;Parent=gene1317;Dbxref=Genbank:WP_002210804.1;Name=WP_002210804.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_002210804.1;transl_table=11 NC_014029.1 RefSeq gene 1422854 1425160 . + . ID=gene1318;Name=YPZ3_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06595;old_locus_tag=YPZ3_1108 NC_014029.1 Protein Homology CDS 1422854 1425160 . + 0 ID=cds1297;Parent=gene1318;Dbxref=Genbank:WP_002210805.1;Name=WP_002210805.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_002210805.1;transl_table=11 NC_014029.1 RefSeq gene 1425278 1425481 . - . ID=gene1319;Name=YPZ3_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06600 NC_014029.1 Protein Homology CDS 1425278 1425481 . - 0 ID=cds1298;Parent=gene1319;Dbxref=Genbank:WP_002210806.1;Name=WP_002210806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210806.1;transl_table=11 NC_014029.1 RefSeq gene 1425606 1426496 . - . ID=gene1320;Name=YPZ3_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06605;old_locus_tag=YPZ3_1109 NC_014029.1 Protein Homology CDS 1425606 1426496 . - 0 ID=cds1299;Parent=gene1320;Dbxref=Genbank:WP_002210807.1;Name=WP_002210807.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002210807.1;transl_table=11 NC_014029.1 RefSeq gene 1426908 1428023 . - . ID=gene1321;Name=YPZ3_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06610;old_locus_tag=YPZ3_1110 NC_014029.1 Protein Homology CDS 1426908 1428023 . - 0 ID=cds1300;Parent=gene1321;Dbxref=Genbank:WP_002210809.1;Name=WP_002210809.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_002210809.1;transl_table=11 NC_014029.1 RefSeq gene 1428293 1430473 . + . ID=gene1322;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YPZ3_RS06615;old_locus_tag=YPZ3_1111 NC_014029.1 Protein Homology CDS 1428293 1430473 . + 0 ID=cds1301;Parent=gene1322;Dbxref=Genbank:WP_002210810.1;Name=WP_002210810.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_002210810.1;transl_table=11 NC_014029.1 RefSeq gene 1430541 1431983 . - . ID=gene1323;Name=YPZ3_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06620;old_locus_tag=YPZ3_1112 NC_014029.1 Protein Homology CDS 1430541 1431983 . - 0 ID=cds1302;Parent=gene1323;Dbxref=Genbank:WP_002228030.1;Name=WP_002228030.1;gbkey=CDS;product=catalase;protein_id=WP_002228030.1;transl_table=11 NC_014029.1 RefSeq gene 1432341 1432883 . + . ID=gene1324;Name=YPZ3_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06625;old_locus_tag=YPZ3_1113 NC_014029.1 Protein Homology CDS 1432341 1432883 . + 0 ID=cds1303;Parent=gene1324;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11 NC_014029.1 RefSeq gene 1433140 1434348 . - . ID=gene1325;Name=YPZ3_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06630;old_locus_tag=YPZ3_1114 NC_014029.1 Protein Homology CDS 1433140 1434348 . - 0 ID=cds1304;Parent=gene1325;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NC_014029.1 RefSeq gene 1434967 1436160 . + . ID=gene1326;Name=YPZ3_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06635;old_locus_tag=YPZ3_1115 NC_014029.1 Protein Homology CDS 1434967 1436160 . + 0 ID=cds1305;Parent=gene1326;Dbxref=Genbank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210814.1;transl_table=11 NC_014029.1 RefSeq gene 1436218 1436727 . - . ID=gene1327;Name=YPZ3_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06640;old_locus_tag=YPZ3_1116 NC_014029.1 Protein Homology CDS 1436218 1436727 . - 0 ID=cds1306;Parent=gene1327;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11 NC_014029.1 RefSeq gene 1436762 1437019 . - . ID=gene1328;Name=YPZ3_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06645 NC_014029.1 Protein Homology CDS 1436762 1437019 . - 0 ID=cds1307;Parent=gene1328;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11 NC_014029.1 RefSeq gene 1437023 1438153 . - . ID=gene1329;Name=YPZ3_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06650;old_locus_tag=YPZ3_1117 NC_014029.1 Protein Homology CDS 1437023 1438153 . - 0 ID=cds1308;Parent=gene1329;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NC_014029.1 RefSeq gene 1438316 1440604 . - . ID=gene1330;Name=YPZ3_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06655;old_locus_tag=YPZ3_1118 NC_014029.1 Protein Homology CDS 1438316 1440604 . - 0 ID=cds1309;Parent=gene1330;Dbxref=Genbank:WP_002210818.1;Name=WP_002210818.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NC_014029.1 RefSeq gene 1441098 1441826 . - . ID=gene1331;Name=YPZ3_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06660;old_locus_tag=YPZ3_1119 NC_014029.1 Protein Homology CDS 1441098 1441826 . - 0 ID=cds1310;Parent=gene1331;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11 NC_014029.1 RefSeq gene 1442088 1444763 . + . ID=gene1332;Name=YPZ3_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06665;old_locus_tag=YPZ3_1120 NC_014029.1 Protein Homology CDS 1442088 1444763 . + 0 ID=cds1311;Parent=gene1332;Dbxref=Genbank:WP_002210821.1;Name=WP_002210821.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_002210821.1;transl_table=11 NC_014029.1 RefSeq gene 1444766 1444891 . + . ID=gene1333;Name=YPZ3_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06670 NC_014029.1 Protein Homology CDS 1444766 1444891 . + 0 ID=cds1312;Parent=gene1333;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11 NC_014029.1 RefSeq gene 1445044 1447824 . + . ID=gene1334;Name=YPZ3_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06675;old_locus_tag=YPZ3_1121 NC_014029.1 Protein Homology CDS 1445044 1447824 . + 0 ID=cds1313;Parent=gene1334;Dbxref=Genbank:WP_002210823.1;Name=WP_002210823.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002210823.1;transl_table=11 NC_014029.1 RefSeq gene 1447892 1448545 . - . ID=gene1335;Name=YPZ3_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06680;old_locus_tag=YPZ3_1122 NC_014029.1 Protein Homology CDS 1447892 1448545 . - 0 ID=cds1314;Parent=gene1335;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11 NC_014029.1 RefSeq gene 1448548 1449120 . - . ID=gene1336;Name=YPZ3_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06685;old_locus_tag=YPZ3_1123 NC_014029.1 Protein Homology CDS 1448548 1449120 . - 0 ID=cds1315;Parent=gene1336;Dbxref=Genbank:WP_002216094.1;Name=WP_002216094.1;gbkey=CDS;product=histidine phosphotransferase;protein_id=WP_002216094.1;transl_table=11 NC_014029.1 RefSeq gene 1449288 1451165 . - . ID=gene1337;Name=YPZ3_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06690;old_locus_tag=YPZ3_1124 NC_014029.1 Protein Homology CDS 1449288 1451165 . - 0 ID=cds1316;Parent=gene1337;Dbxref=Genbank:WP_002231290.1;Name=WP_002231290.1;gbkey=CDS;product=ATPase;protein_id=WP_002231290.1;transl_table=11 NC_014029.1 RefSeq gene 1451264 1452418 . - . ID=gene1338;Name=YPZ3_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06695;old_locus_tag=YPZ3_1125 NC_014029.1 Protein Homology CDS 1451264 1452418 . - 0 ID=cds1317;Parent=gene1338;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NC_014029.1 RefSeq gene 1453521 1454636 . + . ID=gene1339;Name=YPZ3_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06705;old_locus_tag=YPZ3_1126 NC_014029.1 Protein Homology CDS 1453521 1454636 . + 0 ID=cds1318;Parent=gene1339;Dbxref=Genbank:WP_002210826.1;Name=WP_002210826.1;gbkey=CDS;product=porin;protein_id=WP_002210826.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1454683 1455406 . + . ID=id113;gbkey=repeat_region NC_014029.1 RefSeq gene 1454838 1455296 . + . ID=gene1340;Name=YPZ3_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06710;old_locus_tag=YPZ3_1127 NC_014029.1 Protein Homology CDS 1454838 1455296 . + 0 ID=cds1319;Parent=gene1340;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1455730 1455817 . + . ID=gene1341;Name=YPZ3_RS06715;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS06715;old_locus_tag=YPZ3_t15 NC_014029.1 tRNAscan-SE tRNA 1455730 1455817 . + . ID=rna20;Parent=gene1341;anticodon=(pos:1455764..1455766);gbkey=tRNA;product=tRNA-Ser NC_014029.1 tRNAscan-SE exon 1455730 1455817 . + . ID=id114;Parent=rna20;anticodon=(pos:1455764..1455766);gbkey=tRNA;product=tRNA-Ser NC_014029.1 RefSeq gene 1455823 1455898 . + . ID=gene1342;Name=YPZ3_RS06720;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS06720;old_locus_tag=YPZ3_t16 NC_014029.1 tRNAscan-SE tRNA 1455823 1455898 . + . ID=rna21;Parent=gene1342;anticodon=(pos:1455856..1455858);gbkey=tRNA;product=tRNA-Thr NC_014029.1 tRNAscan-SE exon 1455823 1455898 . + . ID=id115;Parent=rna21;anticodon=(pos:1455856..1455858);gbkey=tRNA;product=tRNA-Thr NC_014029.1 RefSeq gene 1456086 1457252 . - . ID=gene1343;Name=YPZ3_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06725;old_locus_tag=YPZ3_1128 NC_014029.1 Protein Homology CDS 1456086 1457252 . - 0 ID=cds1320;Parent=gene1343;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11 NC_014029.1 RefSeq gene 1457370 1457540 . + . ID=gene1344;Name=YPZ3_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06730 NC_014029.1 Protein Homology CDS 1457370 1457540 . + 0 ID=cds1321;Parent=gene1344;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11 NC_014029.1 RefSeq gene 1457527 1459053 . - . ID=gene1345;Name=YPZ3_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06735;old_locus_tag=YPZ3_1129 NC_014029.1 Protein Homology CDS 1457527 1459053 . - 0 ID=cds1322;Parent=gene1345;Dbxref=Genbank:WP_002208870.1;Name=WP_002208870.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002208870.1;transl_table=11 NC_014029.1 RefSeq gene 1459469 1460458 . + . ID=gene1346;Name=YPZ3_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06740;old_locus_tag=YPZ3_1130 NC_014029.1 Protein Homology CDS 1459469 1460458 . + 0 ID=cds1323;Parent=gene1346;Dbxref=Genbank:WP_002363585.1;Name=WP_002363585.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002363585.1;transl_table=11 NC_014029.1 RefSeq gene 1460532 1462319 . - . ID=gene1347;Name=YPZ3_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06745;old_locus_tag=YPZ3_1131 NC_014029.1 Protein Homology CDS 1460532 1462319 . - 0 ID=cds1324;Parent=gene1347;Dbxref=Genbank:WP_002208868.1;Name=WP_002208868.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NC_014029.1 RefSeq gene 1462741 1463676 . - . ID=gene1348;Name=YPZ3_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06750;old_locus_tag=YPZ3_1132 NC_014029.1 Protein Homology CDS 1462741 1463676 . - 0 ID=cds1325;Parent=gene1348;Dbxref=Genbank:WP_002208867.1;Name=WP_002208867.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_002208867.1;transl_table=11 NC_014029.1 RefSeq gene 1463848 1464090 . - . ID=gene1349;Name=YPZ3_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06755 NC_014029.1 Protein Homology CDS 1463848 1464090 . - 0 ID=cds1326;Parent=gene1349;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11 NC_014029.1 RefSeq gene 1464296 1465018 . - . ID=gene1350;Name=YPZ3_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06760;old_locus_tag=YPZ3_1133 NC_014029.1 Protein Homology CDS 1464296 1465018 . - 0 ID=cds1327;Parent=gene1350;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11 NC_014029.1 RefSeq gene 1465292 1465771 . + . ID=gene1351;Name=YPZ3_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06765;old_locus_tag=YPZ3_1134 NC_014029.1 Protein Homology CDS 1465292 1465771 . + 0 ID=cds1328;Parent=gene1351;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11 NC_014029.1 RefSeq gene 1465982 1467286 . + . ID=gene1352;Name=YPZ3_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06770;old_locus_tag=YPZ3_1135 NC_014029.1 Protein Homology CDS 1465982 1467286 . + 0 ID=cds1329;Parent=gene1352;Dbxref=Genbank:WP_002208862.1;Name=WP_002208862.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_002208862.1;transl_table=11 NC_014029.1 RefSeq gene 1467343 1467992 . + . ID=gene1353;Name=YPZ3_RS06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS06775;old_locus_tag=YPZ3_1136;pseudo=true NC_014029.1 Protein Homology CDS 1467343 1467992 . + 0 ID=cds1330;Parent=gene1353;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aldolase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 1467998 1468807 . + . ID=gene1354;Name=YPZ3_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06780;old_locus_tag=YPZ3_1137 NC_014029.1 Protein Homology CDS 1467998 1468807 . + 0 ID=cds1331;Parent=gene1354;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11 NC_014029.1 RefSeq gene 1468783 1469577 . + . ID=gene1355;Name=YPZ3_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06785;old_locus_tag=YPZ3_1138 NC_014029.1 Protein Homology CDS 1468783 1469577 . + 0 ID=cds1332;Parent=gene1355;Dbxref=Genbank:WP_002208860.1;Name=WP_002208860.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002208860.1;transl_table=11 NC_014029.1 RefSeq gene 1470208 1470498 . + . ID=gene1356;Name=YPZ3_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06790 NC_014029.1 Protein Homology CDS 1470208 1470498 . + 0 ID=cds1333;Parent=gene1356;Dbxref=Genbank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NC_014029.1 RefSeq gene 1470592 1471161 . + . ID=gene1357;Name=YPZ3_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06795;old_locus_tag=YPZ3_1139 NC_014029.1 Protein Homology CDS 1470592 1471161 . + 0 ID=cds1334;Parent=gene1357;Dbxref=Genbank:WP_002363609.1;Name=WP_002363609.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002363609.1;transl_table=11 NC_014029.1 RefSeq gene 1471166 1471360 . + . ID=gene1358;Name=YPZ3_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06800 NC_014029.1 Protein Homology CDS 1471166 1471360 . + 0 ID=cds1335;Parent=gene1358;Dbxref=Genbank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208857.1;transl_table=11 NC_014029.1 RefSeq gene 1471357 1472865 . + . ID=gene1359;Name=YPZ3_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06805;old_locus_tag=YPZ3_1140 NC_014029.1 Protein Homology CDS 1471357 1472865 . + 0 ID=cds1336;Parent=gene1359;Dbxref=Genbank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;product=tail protein;protein_id=WP_002208856.1;transl_table=11 NC_014029.1 RefSeq gene 1472887 1473255 . + . ID=gene1360;Name=YPZ3_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06810;old_locus_tag=YPZ3_1141 NC_014029.1 Protein Homology CDS 1472887 1473255 . + 0 ID=cds1337;Parent=gene1360;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11 NC_014029.1 RefSeq gene 1473257 1473556 . + . ID=gene1361;Name=YPZ3_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06815 NC_014029.1 Protein Homology CDS 1473257 1473556 . + 0 ID=cds1338;Parent=gene1361;Dbxref=Genbank:WP_002208854.1;Name=WP_002208854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208854.1;transl_table=11 NC_014029.1 RefSeq gene 1473677 1475170 . + . ID=gene1362;Name=YPZ3_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06820;old_locus_tag=YPZ3_1142 NC_014029.1 Protein Homology CDS 1473677 1475170 . + 0 ID=cds1339;Parent=gene1362;Dbxref=Genbank:WP_002208853.1;Name=WP_002208853.1;gbkey=CDS;product=coat protein;protein_id=WP_002208853.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1475210 1475379 . + . ID=id116;gbkey=repeat_region NC_014029.1 RefSeq gene 1475437 1476843 . + . ID=gene1363;Name=YPZ3_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06825;old_locus_tag=YPZ3_1143 NC_014029.1 Protein Homology CDS 1475437 1476843 . + 0 ID=cds1340;Parent=gene1363;Dbxref=Genbank:WP_002208852.1;Name=WP_002208852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208852.1;transl_table=11 NC_014029.1 RefSeq gene 1476840 1477895 . + . ID=gene1364;Name=YPZ3_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06830;old_locus_tag=YPZ3_1144 NC_014029.1 Protein Homology CDS 1476840 1477895 . + 0 ID=cds1341;Parent=gene1364;Dbxref=Genbank:WP_002208850.1;Name=WP_002208850.1;gbkey=CDS;product=tail protein;protein_id=WP_002208850.1;transl_table=11 NC_014029.1 RefSeq gene 1477911 1478507 . + . ID=gene1365;Name=YPZ3_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06835;old_locus_tag=YPZ3_1145 NC_014029.1 Protein Homology CDS 1477911 1478507 . + 0 ID=cds1342;Parent=gene1365;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11 NC_014029.1 RefSeq gene 1478504 1478959 . + . ID=gene1366;Name=YPZ3_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06840;old_locus_tag=YPZ3_1146 NC_014029.1 Protein Homology CDS 1478504 1478959 . + 0 ID=cds1343;Parent=gene1366;Dbxref=Genbank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208848.1;transl_table=11 NC_014029.1 RefSeq gene 1478963 1480099 . + . ID=gene1367;Name=YPZ3_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06845;old_locus_tag=YPZ3_1147 NC_014029.1 Protein Homology CDS 1478963 1480099 . + 0 ID=cds1344;Parent=gene1367;Dbxref=Genbank:WP_002208847.1;Name=WP_002208847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208847.1;transl_table=11 NC_014029.1 RefSeq gene 1480096 1480356 . + . ID=gene1368;Name=YPZ3_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06850 NC_014029.1 Protein Homology CDS 1480096 1480356 . + 0 ID=cds1345;Parent=gene1368;Dbxref=Genbank:WP_002215458.1;Name=WP_002215458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215458.1;transl_table=11 NC_014029.1 RefSeq gene 1480353 1480700 . + . ID=gene1369;Name=YPZ3_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06855;old_locus_tag=YPZ3_1148 NC_014029.1 Protein Homology CDS 1480353 1480700 . + 0 ID=cds1346;Parent=gene1369;Dbxref=Genbank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208846.1;transl_table=11 NC_014029.1 RefSeq gene 1480797 1481576 . + . ID=gene1370;Name=YPZ3_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06860;old_locus_tag=YPZ3_1149 NC_014029.1 Protein Homology CDS 1480797 1481576 . + 0 ID=cds1347;Parent=gene1370;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11 NC_014029.1 RefSeq gene 1481874 1482614 . + . ID=gene1371;Name=YPZ3_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06865;old_locus_tag=YPZ3_1150 NC_014029.1 Protein Homology CDS 1481874 1482614 . + 0 ID=cds1348;Parent=gene1371;Dbxref=Genbank:WP_002208843.1;Name=WP_002208843.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NC_014029.1 RefSeq gene 1482905 1484341 . + . ID=gene1372;Name=YPZ3_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06870;old_locus_tag=YPZ3_1151 NC_014029.1 Protein Homology CDS 1482905 1484341 . + 0 ID=cds1349;Parent=gene1372;Dbxref=Genbank:WP_002208842.1;Name=WP_002208842.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NC_014029.1 RefSeq gene 1484467 1484829 . - . ID=gene1373;Name=YPZ3_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06875;old_locus_tag=YPZ3_1152 NC_014029.1 Protein Homology CDS 1484467 1484829 . - 0 ID=cds1350;Parent=gene1373;Dbxref=Genbank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1485150 1485270 . + . ID=id117;gbkey=repeat_region NC_014029.1 RefSeq gene 1485529 1486017 . - . ID=gene1374;Name=YPZ3_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06885;old_locus_tag=YPZ3_1153 NC_014029.1 Protein Homology CDS 1485529 1486017 . - 0 ID=cds1351;Parent=gene1374;Dbxref=Genbank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208840.1;transl_table=11 NC_014029.1 RefSeq gene 1486030 1487178 . - . ID=gene1375;Name=YPZ3_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06890;old_locus_tag=YPZ3_1154 NC_014029.1 Protein Homology CDS 1486030 1487178 . - 0 ID=cds1352;Parent=gene1375;Dbxref=Genbank:WP_002208839.1;Name=WP_002208839.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002208839.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1486745 1487297 . + . ID=id118;gbkey=repeat_region NC_014029.1 RefSeq gene 1487968 1488044 . - . ID=gene1376;Name=YPZ3_RS06900;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS06900;old_locus_tag=YPZ3_t17 NC_014029.1 tRNAscan-SE tRNA 1487968 1488044 . - . ID=rna22;Parent=gene1376;anticodon=(pos:complement(1488008..1488010));gbkey=tRNA;product=tRNA-Pro NC_014029.1 tRNAscan-SE exon 1487968 1488044 . - . ID=id119;Parent=rna22;anticodon=(pos:complement(1488008..1488010));gbkey=tRNA;product=tRNA-Pro NC_014029.1 RefSeq gene 1488149 1489945 . - . ID=gene1377;Name=YPZ3_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06905;old_locus_tag=YPZ3_1156 NC_014029.1 Protein Homology CDS 1488149 1489945 . - 0 ID=cds1353;Parent=gene1377;Dbxref=Genbank:WP_002208837.1;Name=WP_002208837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208837.1;transl_table=11 NC_014029.1 RefSeq gene 1489973 1490200 . - . ID=gene1378;Name=YPZ3_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06910 NC_014029.1 Protein Homology CDS 1489973 1490200 . - 0 ID=cds1354;Parent=gene1378;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11 NC_014029.1 RefSeq gene 1490378 1491382 . + . ID=gene1379;Name=YPZ3_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06915;old_locus_tag=YPZ3_1157 NC_014029.1 Protein Homology CDS 1490378 1491382 . + 0 ID=cds1355;Parent=gene1379;Dbxref=Genbank:WP_002208835.1;Name=WP_002208835.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_002208835.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1491428 1492151 . + . ID=id120;gbkey=repeat_region NC_014029.1 RefSeq gene 1491438 1491593 . + . ID=gene1380;Name=YPZ3_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06920 NC_014029.1 Protein Homology CDS 1491438 1491593 . + 0 ID=cds1356;Parent=gene1380;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 1491583 1492041 . + . ID=gene1381;Name=YPZ3_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06925;old_locus_tag=YPZ3_1158 NC_014029.1 Protein Homology CDS 1491583 1492041 . + 0 ID=cds1357;Parent=gene1381;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1492180 1492464 . - . ID=gene1382;Name=YPZ3_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06930 NC_014029.1 Protein Homology CDS 1492180 1492464 . - 0 ID=cds1358;Parent=gene1382;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NC_014029.1 RefSeq gene 1492626 1494383 . - . ID=gene1383;Name=YPZ3_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06935;old_locus_tag=YPZ3_1159 NC_014029.1 Protein Homology CDS 1492626 1494383 . - 0 ID=cds1359;Parent=gene1383;Dbxref=Genbank:WP_002208833.1;Name=WP_002208833.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208833.1;transl_table=11 NC_014029.1 RefSeq gene 1494897 1495604 . + . ID=gene1384;Name=YPZ3_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06940;old_locus_tag=YPZ3_1160 NC_014029.1 Protein Homology CDS 1494897 1495604 . + 0 ID=cds1360;Parent=gene1384;Dbxref=Genbank:WP_002208832.1;Name=WP_002208832.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=WP_002208832.1;transl_table=11 NC_014029.1 RefSeq gene 1495723 1496922 . + . ID=gene1385;Name=YPZ3_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06945;old_locus_tag=YPZ3_1161 NC_014029.1 Protein Homology CDS 1495723 1496922 . + 0 ID=cds1361;Parent=gene1385;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11 NC_014029.1 RefSeq gene 1497889 1498233 . + . ID=gene1386;Name=YPZ3_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06950;old_locus_tag=YPZ3_1162 NC_014029.1 Protein Homology CDS 1497889 1498233 . + 0 ID=cds1362;Parent=gene1386;Dbxref=Genbank:WP_002208829.1;Name=WP_002208829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208829.1;transl_table=11 NC_014029.1 RefSeq gene 1498294 1499886 . - . ID=gene1387;Name=YPZ3_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06955;old_locus_tag=YPZ3_1163 NC_014029.1 Protein Homology CDS 1498294 1499886 . - 0 ID=cds1363;Parent=gene1387;Dbxref=Genbank:WP_002208828.1;Name=WP_002208828.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208828.1;transl_table=11 NC_014029.1 RefSeq gene 1499888 1500913 . - . ID=gene1388;Name=YPZ3_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06960;old_locus_tag=YPZ3_1164 NC_014029.1 Protein Homology CDS 1499888 1500913 . - 0 ID=cds1364;Parent=gene1388;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NC_014029.1 RefSeq gene 1500916 1502016 . - . ID=gene1389;Name=YPZ3_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06965;old_locus_tag=YPZ3_1165 NC_014029.1 Protein Homology CDS 1500916 1502016 . - 0 ID=cds1365;Parent=gene1389;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NC_014029.1 RefSeq gene 1502026 1503834 . - . ID=gene1390;Name=YPZ3_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06970;old_locus_tag=YPZ3_1166 NC_014029.1 Protein Homology CDS 1502026 1503834 . - 0 ID=cds1366;Parent=gene1390;Dbxref=Genbank:WP_002208825.1;Name=WP_002208825.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002208825.1;transl_table=11 NC_014029.1 RefSeq gene 1503916 1505388 . - . ID=gene1391;Name=YPZ3_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06975;old_locus_tag=YPZ3_1167 NC_014029.1 Protein Homology CDS 1503916 1505388 . - 0 ID=cds1367;Parent=gene1391;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11 NC_014029.1 RefSeq gene 1506084 1506668 . - . ID=gene1392;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=YPZ3_RS06980;old_locus_tag=YPZ3_1168 NC_014029.1 Protein Homology CDS 1506084 1506668 . - 0 ID=cds1368;Parent=gene1392;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11 NC_014029.1 RefSeq gene 1507110 1507811 . - . ID=gene1393;Name=YPZ3_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06985;old_locus_tag=YPZ3_1169 NC_014029.1 Protein Homology CDS 1507110 1507811 . - 0 ID=cds1369;Parent=gene1393;Dbxref=Genbank:WP_002208820.1;Name=WP_002208820.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208820.1;transl_table=11 NC_014029.1 RefSeq gene 1507870 1508853 . - . ID=gene1394;Name=YPZ3_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06990;old_locus_tag=YPZ3_1170 NC_014029.1 Protein Homology CDS 1507870 1508853 . - 0 ID=cds1370;Parent=gene1394;Dbxref=Genbank:WP_002208819.1;Name=WP_002208819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208819.1;transl_table=11 NC_014029.1 RefSeq gene 1509177 1509290 . - . ID=gene1395;Name=YPZ3_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS06995 NC_014029.1 Protein Homology CDS 1509177 1509290 . - 0 ID=cds1371;Parent=gene1395;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11 NC_014029.1 RefSeq gene 1509661 1510404 . + . ID=gene1396;Name=YPZ3_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07000;old_locus_tag=YPZ3_1171 NC_014029.1 Protein Homology CDS 1509661 1510404 . + 0 ID=cds1372;Parent=gene1396;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NC_014029.1 RefSeq gene 1510548 1512020 . - . ID=gene1397;Name=YPZ3_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07005;old_locus_tag=YPZ3_1172 NC_014029.1 Protein Homology CDS 1510548 1512020 . - 0 ID=cds1373;Parent=gene1397;Dbxref=Genbank:WP_002208815.1;Name=WP_002208815.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_002208815.1;transl_table=11 NC_014029.1 RefSeq gene 1512605 1513798 . + . ID=gene1398;Name=YPZ3_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07010;old_locus_tag=YPZ3_1173 NC_014029.1 Protein Homology CDS 1512605 1513798 . + 0 ID=cds1374;Parent=gene1398;Dbxref=Genbank:WP_002208813.1;Name=WP_002208813.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_002208813.1;transl_table=11 NC_014029.1 RefSeq gene 1513938 1514510 . - . ID=gene1399;Name=YPZ3_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07015;old_locus_tag=YPZ3_1174 NC_014029.1 Protein Homology CDS 1513938 1514510 . - 0 ID=cds1375;Parent=gene1399;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11 NC_014029.1 RefSeq gene 1514614 1515858 . - . ID=gene1400;Name=YPZ3_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07020;old_locus_tag=YPZ3_1175 NC_014029.1 Protein Homology CDS 1514614 1515858 . - 0 ID=cds1376;Parent=gene1400;Dbxref=Genbank:WP_002208812.1;Name=WP_002208812.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11 NC_014029.1 RefSeq gene 1516233 1516487 . + . ID=gene1401;Name=YPZ3_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07025 NC_014029.1 Protein Homology CDS 1516233 1516487 . + 0 ID=cds1377;Parent=gene1401;Dbxref=Genbank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208811.1;transl_table=11 NC_014029.1 RefSeq gene 1516556 1517371 . - . ID=gene1402;Name=YPZ3_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07030;old_locus_tag=YPZ3_1176 NC_014029.1 Protein Homology CDS 1516556 1517371 . - 0 ID=cds1378;Parent=gene1402;Dbxref=Genbank:WP_002208810.1;Name=WP_002208810.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002208810.1;transl_table=11 NC_014029.1 RefSeq gene 1517382 1518332 . - . ID=gene1403;Name=YPZ3_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07035;old_locus_tag=YPZ3_1177 NC_014029.1 Protein Homology CDS 1517382 1518332 . - 0 ID=cds1379;Parent=gene1403;Dbxref=Genbank:WP_002264752.1;Name=WP_002264752.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002264752.1;transl_table=11 NC_014029.1 RefSeq gene 1518344 1519486 . - . ID=gene1404;Name=YPZ3_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07040;old_locus_tag=YPZ3_1178 NC_014029.1 Protein Homology CDS 1518344 1519486 . - 0 ID=cds1380;Parent=gene1404;Dbxref=Genbank:WP_002208808.1;Name=WP_002208808.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_002208808.1;transl_table=11 NC_014029.1 RefSeq gene 1519838 1521334 . + . ID=gene1405;Name=YPZ3_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07045;old_locus_tag=YPZ3_1179 NC_014029.1 Protein Homology CDS 1519838 1521334 . + 0 ID=cds1381;Parent=gene1405;Dbxref=Genbank:WP_002208807.1;Name=WP_002208807.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002208807.1;transl_table=11 NC_014029.1 RefSeq gene 1521338 1522891 . + . ID=gene1406;Name=YPZ3_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07050;old_locus_tag=YPZ3_1180 NC_014029.1 Protein Homology CDS 1521338 1522891 . + 0 ID=cds1382;Parent=gene1406;Dbxref=Genbank:WP_002208806.1;Name=WP_002208806.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002208806.1;transl_table=11 NC_014029.1 RefSeq gene 1522911 1523621 . + . ID=gene1407;Name=YPZ3_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07055;old_locus_tag=YPZ3_1181 NC_014029.1 Protein Homology CDS 1522911 1523621 . + 0 ID=cds1383;Parent=gene1407;Dbxref=Genbank:WP_002208805.1;Name=WP_002208805.1;gbkey=CDS;product=ribose-5-phosphate isomerase A 2;protein_id=WP_002208805.1;transl_table=11 NC_014029.1 RefSeq gene 1523745 1524833 . + . ID=gene1408;Name=YPZ3_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07060;old_locus_tag=YPZ3_1182 NC_014029.1 Protein Homology CDS 1523745 1524833 . + 0 ID=cds1384;Parent=gene1408;Dbxref=Genbank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11 NC_014029.1 RefSeq gene 1525002 1526516 . + . ID=gene1409;Name=YPZ3_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07065;old_locus_tag=YPZ3_1183 NC_014029.1 Protein Homology CDS 1525002 1526516 . + 0 ID=cds1385;Parent=gene1409;Dbxref=Genbank:WP_002363696.1;Name=WP_002363696.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002363696.1;transl_table=11 NC_014029.1 RefSeq gene 1526552 1527550 . + . ID=gene1410;Name=YPZ3_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07070;old_locus_tag=YPZ3_1184 NC_014029.1 Protein Homology CDS 1526552 1527550 . + 0 ID=cds1386;Parent=gene1410;Dbxref=Genbank:WP_002208802.1;Name=WP_002208802.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002208802.1;transl_table=11 NC_014029.1 RefSeq gene 1527663 1528118 . - . ID=gene1411;Name=YPZ3_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07075;old_locus_tag=YPZ3_1185 NC_014029.1 Protein Homology CDS 1527663 1528118 . - 0 ID=cds1387;Parent=gene1411;Dbxref=Genbank:WP_002208801.1;Name=WP_002208801.1;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=WP_002208801.1;transl_table=11 NC_014029.1 RefSeq gene 1528380 1529513 . + . ID=gene1412;Name=YPZ3_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07080;old_locus_tag=YPZ3_1186 NC_014029.1 Protein Homology CDS 1528380 1529513 . + 0 ID=cds1388;Parent=gene1412;Dbxref=Genbank:WP_002208799.1;Name=WP_002208799.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002208799.1;transl_table=11 NC_014029.1 RefSeq gene 1529510 1530448 . + . ID=gene1413;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YPZ3_RS07085;old_locus_tag=YPZ3_1187 NC_014029.1 Protein Homology CDS 1529510 1530448 . + 0 ID=cds1389;Parent=gene1413;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NC_014029.1 RefSeq gene 1530463 1532163 . + . ID=gene1414;Name=YPZ3_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07090;old_locus_tag=YPZ3_1188 NC_014029.1 Protein Homology CDS 1530463 1532163 . + 0 ID=cds1390;Parent=gene1414;Dbxref=Genbank:WP_002208797.1;Name=WP_002208797.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_002208797.1;transl_table=11 NC_014029.1 RefSeq gene 1532488 1533132 . + . ID=gene1415;Name=YPZ3_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07095;old_locus_tag=YPZ3_1189 NC_014029.1 Protein Homology CDS 1532488 1533132 . + 0 ID=cds1391;Parent=gene1415;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11 NC_014029.1 RefSeq gene 1533129 1533617 . + . ID=gene1416;Name=YPZ3_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07100;old_locus_tag=YPZ3_1190 NC_014029.1 Protein Homology CDS 1533129 1533617 . + 0 ID=cds1392;Parent=gene1416;Dbxref=Genbank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;product=protein PsaF;protein_id=WP_002216523.1;transl_table=11 NC_014029.1 RefSeq gene 1534162 1534638 . + . ID=gene1417;Name=YPZ3_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07105;old_locus_tag=YPZ3_1191 NC_014029.1 Protein Homology CDS 1534162 1534638 . + 0 ID=cds1393;Parent=gene1417;Dbxref=Genbank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_002208794.1;transl_table=11 NC_014029.1 RefSeq gene 1534765 1535586 . + . ID=gene1418;Name=YPZ3_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07110;old_locus_tag=YPZ3_1192 NC_014029.1 Protein Homology CDS 1534765 1535586 . + 0 ID=cds1394;Parent=gene1418;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NC_014029.1 RefSeq gene 1535670 1538141 . + . ID=gene1419;Name=YPZ3_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07115;old_locus_tag=YPZ3_1193 NC_014029.1 Protein Homology CDS 1535670 1538141 . + 0 ID=cds1395;Parent=gene1419;Dbxref=Genbank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;product=usher protein;protein_id=WP_002208792.1;transl_table=11 NC_014029.1 RefSeq gene 1538228 1539085 . - . ID=gene1420;Name=YPZ3_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07120;old_locus_tag=YPZ3_1194 NC_014029.1 Protein Homology CDS 1538228 1539085 . - 0 ID=cds1396;Parent=gene1420;Dbxref=Genbank:WP_002208791.1;Name=WP_002208791.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_002208791.1;transl_table=11 NC_014029.1 RefSeq gene 1539249 1540337 . - . ID=gene1421;Name=YPZ3_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07125;old_locus_tag=YPZ3_1195 NC_014029.1 Protein Homology CDS 1539249 1540337 . - 0 ID=cds1397;Parent=gene1421;Dbxref=Genbank:WP_002208790.1;Name=WP_002208790.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208790.1;transl_table=11 NC_014029.1 RefSeq gene 1540995 1541867 . + . ID=gene1422;Name=YPZ3_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07130;old_locus_tag=YPZ3_1196 NC_014029.1 Protein Homology CDS 1540995 1541867 . + 0 ID=cds1398;Parent=gene1422;Dbxref=Genbank:WP_002208788.1;Name=WP_002208788.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208788.1;transl_table=11 NC_014029.1 RefSeq gene 1542125 1543636 . + . ID=gene1423;Name=YPZ3_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07135;old_locus_tag=YPZ3_1197 NC_014029.1 Protein Homology CDS 1542125 1543636 . + 0 ID=cds1399;Parent=gene1423;Dbxref=Genbank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;product=lysine transporter;protein_id=WP_002208786.1;transl_table=11 NC_014029.1 RefSeq gene 1543922 1545067 . + . ID=gene1424;Name=YPZ3_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07140;old_locus_tag=YPZ3_1198 NC_014029.1 Protein Homology CDS 1543922 1545067 . + 0 ID=cds1400;Parent=gene1424;Dbxref=Genbank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208785.1;transl_table=11 NC_014029.1 RefSeq gene 1545262 1546344 . + . ID=gene1425;Name=YPZ3_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07145;old_locus_tag=YPZ3_1199 NC_014029.1 Protein Homology CDS 1545262 1546344 . + 0 ID=cds1401;Parent=gene1425;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NC_014029.1 RefSeq gene 1546341 1547129 . + . ID=gene1426;Name=YPZ3_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07150;old_locus_tag=YPZ3_1200 NC_014029.1 Protein Homology CDS 1546341 1547129 . + 0 ID=cds1402;Parent=gene1426;Dbxref=Genbank:WP_002208783.1;Name=WP_002208783.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002208783.1;transl_table=11 NC_014029.1 RefSeq gene 1547389 1549386 . + . ID=gene1427;Name=YPZ3_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07155;old_locus_tag=YPZ3_1201 NC_014029.1 Protein Homology CDS 1547389 1549386 . + 0 ID=cds1403;Parent=gene1427;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NC_014029.1 RefSeq gene 1549656 1550276 . - . ID=gene1428;Name=YPZ3_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07160;old_locus_tag=YPZ3_1202 NC_014029.1 Protein Homology CDS 1549656 1550276 . - 0 ID=cds1404;Parent=gene1428;Dbxref=Genbank:WP_002208781.1;Name=WP_002208781.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002208781.1;transl_table=11 NC_014029.1 RefSeq gene 1550430 1551080 . - . ID=gene1429;Name=YPZ3_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07165;old_locus_tag=YPZ3_1203 NC_014029.1 Protein Homology CDS 1550430 1551080 . - 0 ID=cds1405;Parent=gene1429;Dbxref=Genbank:WP_002215448.1;Name=WP_002215448.1;gbkey=CDS;product=hydrolase;protein_id=WP_002215448.1;transl_table=11 NC_014029.1 RefSeq gene 1551567 1552634 . + . ID=gene1430;Name=YPZ3_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07170;old_locus_tag=YPZ3_1204 NC_014029.1 Protein Homology CDS 1551567 1552634 . + 0 ID=cds1406;Parent=gene1430;Dbxref=Genbank:WP_002208778.1;Name=WP_002208778.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_002208778.1;transl_table=11 NC_014029.1 RefSeq gene 1552862 1553686 . + . ID=gene1431;Name=YPZ3_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07175;old_locus_tag=YPZ3_1205 NC_014029.1 Protein Homology CDS 1552862 1553686 . + 0 ID=cds1407;Parent=gene1431;Dbxref=Genbank:WP_002208777.1;Name=WP_002208777.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_002208777.1;transl_table=11 NC_014029.1 RefSeq gene 1553683 1554669 . + . ID=gene1432;Name=YPZ3_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07180;old_locus_tag=YPZ3_1206 NC_014029.1 Protein Homology CDS 1553683 1554669 . + 0 ID=cds1408;Parent=gene1432;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NC_014029.1 RefSeq gene 1554666 1555337 . + . ID=gene1433;Name=YPZ3_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07185;old_locus_tag=YPZ3_1207 NC_014029.1 Protein Homology CDS 1554666 1555337 . + 0 ID=cds1409;Parent=gene1433;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NC_014029.1 RefSeq gene 1555672 1556877 . + . ID=gene1434;Name=YPZ3_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07190;old_locus_tag=YPZ3_1208 NC_014029.1 Protein Homology CDS 1555672 1556877 . + 0 ID=cds1410;Parent=gene1434;Dbxref=Genbank:WP_002208774.1;Name=WP_002208774.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002208774.1;transl_table=11 NC_014029.1 RefSeq gene 1557168 1557320 . + . ID=gene1435;Name=YPZ3_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07195 NC_014029.1 Protein Homology CDS 1557168 1557320 . + 0 ID=cds1411;Parent=gene1435;Dbxref=Genbank:WP_002215444.1;Name=WP_002215444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215444.1;transl_table=11 NC_014029.1 RefSeq gene 1557317 1558618 . - . ID=gene1436;Name=YPZ3_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07200;old_locus_tag=YPZ3_1209 NC_014029.1 Protein Homology CDS 1557317 1558618 . - 0 ID=cds1412;Parent=gene1436;Dbxref=Genbank:WP_002215443.1;Name=WP_002215443.1;gbkey=CDS;product=serine transporter;protein_id=WP_002215443.1;transl_table=11 NC_014029.1 RefSeq gene 1559718 1560482 . - . ID=gene1437;Name=YPZ3_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07205;old_locus_tag=YPZ3_1210 NC_014029.1 Protein Homology CDS 1559718 1560482 . - 0 ID=cds1413;Parent=gene1437;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11 NC_014029.1 RefSeq gene 1560712 1561383 . - . ID=gene1438;Name=YPZ3_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07210;old_locus_tag=YPZ3_1211 NC_014029.1 Protein Homology CDS 1560712 1561383 . - 0 ID=cds1414;Parent=gene1438;Dbxref=Genbank:WP_002208769.1;Name=WP_002208769.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NC_014029.1 RefSeq gene 1561641 1562246 . - . ID=gene1439;Name=YPZ3_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07215;old_locus_tag=YPZ3_1212 NC_014029.1 Protein Homology CDS 1561641 1562246 . - 0 ID=cds1415;Parent=gene1439;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11 NC_014029.1 RefSeq gene 1562246 1562918 . - . ID=gene1440;Name=YPZ3_RS07220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS07220;old_locus_tag=YPZ3_1213;pseudo=true NC_014029.1 Protein Homology CDS 1562246 1562918 . - 0 ID=cds1416;Parent=gene1440;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoesterase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 1563395 1565083 . - . ID=gene1441;Name=YPZ3_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07225;old_locus_tag=YPZ3_1214 NC_014029.1 Protein Homology CDS 1563395 1565083 . - 0 ID=cds1417;Parent=gene1441;Dbxref=Genbank:WP_002208766.1;Name=WP_002208766.1;gbkey=CDS;product=transporter;protein_id=WP_002208766.1;transl_table=11 NC_014029.1 RefSeq gene 1565493 1565756 . - . ID=gene1442;Name=YPZ3_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07230 NC_014029.1 Protein Homology CDS 1565493 1565756 . - 0 ID=cds1418;Parent=gene1442;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NC_014029.1 RefSeq gene 1566219 1566533 . + . ID=gene1443;Name=YPZ3_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07235 NC_014029.1 Protein Homology CDS 1566219 1566533 . + 0 ID=cds1419;Parent=gene1443;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11 NC_014029.1 RefSeq gene 1566549 1566668 . + . ID=gene1444;Name=YPZ3_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07240 NC_014029.1 Protein Homology CDS 1566549 1566668 . + 0 ID=cds1420;Parent=gene1444;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11 NC_014029.1 RefSeq gene 1566675 1567160 . + . ID=gene1445;Name=YPZ3_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07245;old_locus_tag=YPZ3_1215 NC_014029.1 Protein Homology CDS 1566675 1567160 . + 0 ID=cds1421;Parent=gene1445;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11 NC_014029.1 RefSeq gene 1567678 1568787 . + . ID=gene1446;Name=YPZ3_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07250;old_locus_tag=YPZ3_1216 NC_014029.1 Protein Homology CDS 1567678 1568787 . + 0 ID=cds1422;Parent=gene1446;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11 NC_014029.1 RefSeq gene 1568958 1570091 . + . ID=gene1447;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YPZ3_RS07255;old_locus_tag=YPZ3_1217 NC_014029.1 Protein Homology CDS 1568958 1570091 . + 0 ID=cds1423;Parent=gene1447;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11 NC_014029.1 RefSeq gene 1570116 1571081 . + . ID=gene1448;Name=YPZ3_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07260;old_locus_tag=YPZ3_1218 NC_014029.1 Protein Homology CDS 1570116 1571081 . + 0 ID=cds1424;Parent=gene1448;Dbxref=Genbank:WP_002208759.1;Name=WP_002208759.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208759.1;transl_table=11 NC_014029.1 RefSeq gene 1571078 1571923 . + . ID=gene1449;Name=YPZ3_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07265;old_locus_tag=YPZ3_1219 NC_014029.1 Protein Homology CDS 1571078 1571923 . + 0 ID=cds1425;Parent=gene1449;Dbxref=Genbank:WP_002208758.1;Name=WP_002208758.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208758.1;transl_table=11 NC_014029.1 RefSeq gene 1572048 1572512 . + . ID=gene1450;Name=YPZ3_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07270;old_locus_tag=YPZ3_1220 NC_014029.1 Protein Homology CDS 1572048 1572512 . + 0 ID=cds1426;Parent=gene1450;Dbxref=Genbank:WP_002208757.1;Name=WP_002208757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208757.1;transl_table=11 NC_014029.1 RefSeq gene 1572596 1573726 . + . ID=gene1451;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=YPZ3_RS07275;old_locus_tag=YPZ3_1221 NC_014029.1 Protein Homology CDS 1572596 1573726 . + 0 ID=cds1427;Parent=gene1451;Dbxref=Genbank:WP_002208756.1;Name=WP_002208756.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_002208756.1;transl_table=11 NC_014029.1 RefSeq gene 1573853 1574584 . - . ID=gene1452;Name=YPZ3_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07280;old_locus_tag=YPZ3_1222 NC_014029.1 Protein Homology CDS 1573853 1574584 . - 0 ID=cds1428;Parent=gene1452;Dbxref=Genbank:WP_002220045.1;Name=WP_002220045.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11 NC_014029.1 RefSeq gene 1574704 1574820 . + . ID=gene1453;Name=YPZ3_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07285 NC_014029.1 Protein Homology CDS 1574704 1574820 . + 0 ID=cds1429;Parent=gene1453;Dbxref=Genbank:WP_002211379.1;Name=WP_002211379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211379.1;transl_table=11 NC_014029.1 RefSeq gene 1574832 1575062 . + . ID=gene1454;Name=YPZ3_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07290 NC_014029.1 Protein Homology CDS 1574832 1575062 . + 0 ID=cds1430;Parent=gene1454;Dbxref=Genbank:WP_002228004.1;Name=WP_002228004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228004.1;transl_table=11 NC_014029.1 RefSeq gene 1575403 1576329 . + . ID=gene1455;Name=YPZ3_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07295;old_locus_tag=YPZ3_1223 NC_014029.1 Protein Homology CDS 1575403 1576329 . + 0 ID=cds1431;Parent=gene1455;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11 NC_014029.1 RefSeq gene 1576741 1577832 . + . ID=gene1456;Name=YPZ3_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07300;old_locus_tag=YPZ3_1224 NC_014029.1 Protein Homology CDS 1576741 1577832 . + 0 ID=cds1432;Parent=gene1456;Dbxref=Genbank:WP_002211377.1;Name=WP_002211377.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002211377.1;transl_table=11 NC_014029.1 RefSeq gene 1577832 1578888 . + . ID=gene1457;Name=YPZ3_RS07305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS07305;pseudo=true NC_014029.1 Protein Homology CDS 1577832 1578888 . + 0 ID=cds1433;Parent=gene1457;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron-siderophore ABC transporter permease;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 1578885 1579670 . + . ID=gene1458;Name=YPZ3_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07310;old_locus_tag=YPZ3_1227 NC_014029.1 Protein Homology CDS 1578885 1579670 . + 0 ID=cds1434;Parent=gene1458;Dbxref=Genbank:WP_002211375.1;Name=WP_002211375.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002211375.1;transl_table=11 NC_014029.1 RefSeq gene 1579658 1580455 . + . ID=gene1459;Name=YPZ3_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07315;old_locus_tag=YPZ3_1228 NC_014029.1 Protein Homology CDS 1579658 1580455 . + 0 ID=cds1435;Parent=gene1459;Dbxref=Genbank:WP_002211374.1;Name=WP_002211374.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_002211374.1;transl_table=11 NC_014029.1 RefSeq gene 1580448 1581818 . + . ID=gene1460;Name=YPZ3_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07320;old_locus_tag=YPZ3_1229 NC_014029.1 Protein Homology CDS 1580448 1581818 . + 0 ID=cds1436;Parent=gene1460;Dbxref=Genbank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211373.1;transl_table=11 NC_014029.1 RefSeq gene 1581815 1582660 . + . ID=gene1461;Name=YPZ3_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07325;old_locus_tag=YPZ3_1230 NC_014029.1 Protein Homology CDS 1581815 1582660 . + 0 ID=cds1437;Parent=gene1461;Dbxref=Genbank:WP_002211372.1;Name=WP_002211372.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211372.1;transl_table=11 NC_014029.1 RefSeq gene 1582850 1583518 . - . ID=gene1462;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YPZ3_RS07335;old_locus_tag=YPZ3_1231 NC_014029.1 Protein Homology CDS 1582850 1583518 . - 0 ID=cds1438;Parent=gene1462;Dbxref=Genbank:WP_002211370.1;Name=WP_002211370.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_002211370.1;transl_table=11 NC_014029.1 RefSeq gene 1583518 1584234 . - . ID=gene1463;Name=YPZ3_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07340;old_locus_tag=YPZ3_1232 NC_014029.1 Protein Homology CDS 1583518 1584234 . - 0 ID=cds1439;Parent=gene1463;Dbxref=Genbank:WP_002211369.1;Name=WP_002211369.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_002211369.1;transl_table=11 NC_014029.1 RefSeq gene 1584246 1584977 . - . ID=gene1464;Name=YPZ3_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07345;old_locus_tag=YPZ3_1233 NC_014029.1 Protein Homology CDS 1584246 1584977 . - 0 ID=cds1440;Parent=gene1464;Dbxref=Genbank:WP_002211368.1;Name=WP_002211368.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NC_014029.1 RefSeq gene 1584998 1585726 . - . ID=gene1465;Name=YPZ3_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07350;old_locus_tag=YPZ3_1234 NC_014029.1 Protein Homology CDS 1584998 1585726 . - 0 ID=cds1441;Parent=gene1465;Dbxref=Genbank:WP_002228008.1;Name=WP_002228008.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002228008.1;transl_table=11 NC_014029.1 RefSeq gene 1586021 1586581 . - . ID=gene1466;Name=YPZ3_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07355;old_locus_tag=YPZ3_1235 NC_014029.1 Protein Homology CDS 1586021 1586581 . - 0 ID=cds1442;Parent=gene1466;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NC_014029.1 RefSeq gene 1586751 1587326 . - . ID=gene1467;Name=YPZ3_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07360;old_locus_tag=YPZ3_1236 NC_014029.1 Protein Homology CDS 1586751 1587326 . - 0 ID=cds1443;Parent=gene1467;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NC_014029.1 RefSeq gene 1587423 1588430 . - . ID=gene1468;Name=YPZ3_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07365;old_locus_tag=YPZ3_1237 NC_014029.1 Protein Homology CDS 1587423 1588430 . - 0 ID=cds1444;Parent=gene1468;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11 NC_014029.1 RefSeq gene 1588530 1590020 . - . ID=gene1469;Name=YPZ3_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07370;old_locus_tag=YPZ3_1238 NC_014029.1 Protein Homology CDS 1588530 1590020 . - 0 ID=cds1445;Parent=gene1469;Dbxref=Genbank:WP_002211363.1;Name=WP_002211363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211363.1;transl_table=11 NC_014029.1 RefSeq gene 1590017 1591036 . - . ID=gene1470;Name=YPZ3_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07375;old_locus_tag=YPZ3_1239 NC_014029.1 Protein Homology CDS 1590017 1591036 . - 0 ID=cds1446;Parent=gene1470;Dbxref=Genbank:WP_002211362.1;Name=WP_002211362.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_002211362.1;transl_table=11 NC_014029.1 RefSeq gene 1591385 1593106 . - . ID=gene1471;Name=YPZ3_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07380;old_locus_tag=YPZ3_1240 NC_014029.1 Protein Homology CDS 1591385 1593106 . - 0 ID=cds1447;Parent=gene1471;Dbxref=Genbank:WP_002211361.1;Name=WP_002211361.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_002211361.1;transl_table=11 NC_014029.1 RefSeq gene 1593250 1594272 . - . ID=gene1472;Name=YPZ3_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07385;old_locus_tag=YPZ3_1241 NC_014029.1 Protein Homology CDS 1593250 1594272 . - 0 ID=cds1448;Parent=gene1472;Dbxref=Genbank:WP_002211360.1;Name=WP_002211360.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211360.1;transl_table=11 NC_014029.1 RefSeq gene 1594386 1596038 . - . ID=gene1473;Name=YPZ3_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07390;old_locus_tag=YPZ3_1242 NC_014029.1 Protein Homology CDS 1594386 1596038 . - 0 ID=cds1449;Parent=gene1473;Dbxref=Genbank:WP_002211359.1;Name=WP_002211359.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_002211359.1;transl_table=11 NC_014029.1 RefSeq gene 1596240 1597136 . - . ID=gene1474;Name=YPZ3_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07395;old_locus_tag=YPZ3_1243 NC_014029.1 Protein Homology CDS 1596240 1597136 . - 0 ID=cds1450;Parent=gene1474;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11 NC_014029.1 RefSeq gene 1597489 1599156 . + . ID=gene1475;Name=YPZ3_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07400;old_locus_tag=YPZ3_1244 NC_014029.1 Protein Homology CDS 1597489 1599156 . + 0 ID=cds1451;Parent=gene1475;Dbxref=Genbank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211356.1;transl_table=11 NC_014029.1 RefSeq gene 1599293 1600240 . - . ID=gene1476;Name=YPZ3_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07405;old_locus_tag=YPZ3_1245 NC_014029.1 Protein Homology CDS 1599293 1600240 . - 0 ID=cds1452;Parent=gene1476;Dbxref=Genbank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211355.1;transl_table=11 NC_014029.1 RefSeq gene 1600477 1601589 . + . ID=gene1477;Name=YPZ3_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07410;old_locus_tag=YPZ3_1246 NC_014029.1 Protein Homology CDS 1600477 1601589 . + 0 ID=cds1453;Parent=gene1477;Dbxref=Genbank:WP_002216705.1;Name=WP_002216705.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11 NC_014029.1 RefSeq gene 1601589 1603538 . + . ID=gene1478;Name=YPZ3_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07415;old_locus_tag=YPZ3_1247 NC_014029.1 Protein Homology CDS 1601589 1603538 . + 0 ID=cds1454;Parent=gene1478;Dbxref=Genbank:WP_002211351.1;Name=WP_002211351.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002211351.1;transl_table=11 NC_014029.1 RefSeq gene 1603819 1604082 . - . ID=gene1479;Name=YPZ3_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07420 NC_014029.1 Protein Homology CDS 1603819 1604082 . - 0 ID=cds1455;Parent=gene1479;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11 NC_014029.1 RefSeq gene 1604443 1604763 . + . ID=gene1480;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YPZ3_RS07425;old_locus_tag=YPZ3_1248 NC_014029.1 Protein Homology CDS 1604443 1604763 . + 0 ID=cds1456;Parent=gene1480;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11 NC_014029.1 RefSeq gene 1604789 1607065 . + . ID=gene1481;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=YPZ3_RS07430;old_locus_tag=YPZ3_1249 NC_014029.1 Protein Homology CDS 1604789 1607065 . + 0 ID=cds1457;Parent=gene1481;Dbxref=Genbank:WP_002211348.1;Name=WP_002211348.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_002211348.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1607205 1607927 . + . ID=id121;gbkey=repeat_region NC_014029.1 RefSeq gene 1607358 1607816 . + . ID=gene1482;Name=YPZ3_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07435;old_locus_tag=YPZ3_1250 NC_014029.1 Protein Homology CDS 1607358 1607816 . + 0 ID=cds1458;Parent=gene1482;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1608188 1608406 . - . ID=gene1483;Name=YPZ3_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07440 NC_014029.1 Protein Homology CDS 1608188 1608406 . - 0 ID=cds1459;Parent=gene1483;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NC_014029.1 RefSeq gene 1608572 1609282 . - . ID=gene1484;Name=YPZ3_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07445;old_locus_tag=YPZ3_1251 NC_014029.1 Protein Homology CDS 1608572 1609282 . - 0 ID=cds1460;Parent=gene1484;Dbxref=Genbank:WP_002211346.1;Name=WP_002211346.1;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NC_014029.1 RefSeq gene 1609501 1611225 . - . ID=gene1485;Name=YPZ3_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07450;old_locus_tag=YPZ3_1252 NC_014029.1 Protein Homology CDS 1609501 1611225 . - 0 ID=cds1461;Parent=gene1485;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11 NC_014029.1 RefSeq gene 1611228 1612994 . - . ID=gene1486;Name=YPZ3_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07455;old_locus_tag=YPZ3_1253 NC_014029.1 Protein Homology CDS 1611228 1612994 . - 0 ID=cds1462;Parent=gene1486;Dbxref=Genbank:WP_002217690.1;Name=WP_002217690.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002217690.1;transl_table=11 NC_014029.1 RefSeq gene 1613211 1613348 . + . ID=gene1487;Name=YPZ3_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07460 NC_014029.1 Protein Homology CDS 1613211 1613348 . + 0 ID=cds1463;Parent=gene1487;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11 NC_014029.1 RefSeq gene 1613453 1614415 . - . ID=gene1488;Name=YPZ3_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07465;old_locus_tag=YPZ3_1254 NC_014029.1 Protein Homology CDS 1613453 1614415 . - 0 ID=cds1464;Parent=gene1488;Dbxref=Genbank:WP_002211341.1;Name=WP_002211341.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_002211341.1;transl_table=11 NC_014029.1 RefSeq gene 1615182 1615676 . + . ID=gene1489;Name=YPZ3_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07470;old_locus_tag=YPZ3_1255 NC_014029.1 Protein Homology CDS 1615182 1615676 . + 0 ID=cds1465;Parent=gene1489;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11 NC_014029.1 RefSeq gene 1615799 1619716 . + . ID=gene1490;Name=YPZ3_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07475;old_locus_tag=YPZ3_1256 NC_014029.1 Protein Homology CDS 1615799 1619716 . + 0 ID=cds1466;Parent=gene1490;Dbxref=Genbank:WP_002211339.1;Name=WP_002211339.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_002211339.1;transl_table=11 NC_014029.1 RefSeq gene 1619909 1620517 . + . ID=gene1491;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YPZ3_RS07480;old_locus_tag=YPZ3_1257 NC_014029.1 Protein Homology CDS 1619909 1620517 . + 0 ID=cds1467;Parent=gene1491;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11 NC_014029.1 RefSeq gene 1620528 1621871 . + . ID=gene1492;Name=YPZ3_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07485;old_locus_tag=YPZ3_1258 NC_014029.1 Protein Homology CDS 1620528 1621871 . + 0 ID=cds1468;Parent=gene1492;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11 NC_014029.1 RefSeq gene 1622113 1623405 . + . ID=gene1493;Name=YPZ3_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07490;old_locus_tag=YPZ3_1259 NC_014029.1 Protein Homology CDS 1622113 1623405 . + 0 ID=cds1469;Parent=gene1493;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NC_014029.1 RefSeq gene 1623660 1624808 . + . ID=gene1494;Name=YPZ3_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07495;old_locus_tag=YPZ3_1260 NC_014029.1 Protein Homology CDS 1623660 1624808 . + 0 ID=cds1470;Parent=gene1494;Dbxref=Genbank:WP_002211335.1;Name=WP_002211335.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211335.1;transl_table=11 NC_014029.1 RefSeq gene 1624962 1625696 . - . ID=gene1495;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YPZ3_RS07500;old_locus_tag=YPZ3_1261 NC_014029.1 Protein Homology CDS 1624962 1625696 . - 0 ID=cds1471;Parent=gene1495;Dbxref=Genbank:WP_002211334.1;Name=WP_002211334.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating protein;protein_id=WP_002211334.1;transl_table=11 NC_014029.1 RefSeq gene 1626683 1627357 . + . ID=gene1496;Name=YPZ3_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07505;old_locus_tag=YPZ3_1262 NC_014029.1 Protein Homology CDS 1626683 1627357 . + 0 ID=cds1472;Parent=gene1496;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11 NC_014029.1 RefSeq gene 1627475 1629757 . - . ID=gene1497;Name=YPZ3_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07510;old_locus_tag=YPZ3_1263 NC_014029.1 Protein Homology CDS 1627475 1629757 . - 0 ID=cds1473;Parent=gene1497;Dbxref=Genbank:WP_002211332.1;Name=WP_002211332.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=keto-acid formate acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NC_014029.1 RefSeq gene 1629813 1630670 . - . ID=gene1498;Name=YPZ3_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07515;old_locus_tag=YPZ3_1264 NC_014029.1 Protein Homology CDS 1629813 1630670 . - 0 ID=cds1474;Parent=gene1498;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NC_014029.1 RefSeq gene 1631367 1633133 . - . ID=gene1499;Name=YPZ3_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07520;old_locus_tag=YPZ3_1265 NC_014029.1 Protein Homology CDS 1631367 1633133 . - 0 ID=cds1475;Parent=gene1499;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11 NC_014029.1 RefSeq gene 1633282 1634319 . + . ID=gene1500;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YPZ3_RS07525;old_locus_tag=YPZ3_1266 NC_014029.1 Protein Homology CDS 1633282 1634319 . + 0 ID=cds1476;Parent=gene1500;Dbxref=Genbank:WP_002211329.1;Name=WP_002211329.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=WP_002211329.1;transl_table=11 NC_014029.1 RefSeq gene 1634588 1635682 . + . ID=gene1501;Name=YPZ3_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07530;old_locus_tag=YPZ3_1267 NC_014029.1 Protein Homology CDS 1634588 1635682 . + 0 ID=cds1477;Parent=gene1501;Dbxref=Genbank:WP_002211328.1;Name=WP_002211328.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002211328.1;transl_table=11 NC_014029.1 RefSeq gene 1635703 1637550 . + . ID=gene1502;Name=YPZ3_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07535;old_locus_tag=YPZ3_1268 NC_014029.1 Protein Homology CDS 1635703 1637550 . + 0 ID=cds1478;Parent=gene1502;Dbxref=Genbank:WP_002211327.1;Name=WP_002211327.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211327.1;transl_table=11 NC_014029.1 RefSeq gene 1637917 1639002 . + . ID=gene1503;Name=YPZ3_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07540;old_locus_tag=YPZ3_1269 NC_014029.1 Protein Homology CDS 1637917 1639002 . + 0 ID=cds1479;Parent=gene1503;Dbxref=Genbank:WP_002211326.1;Name=WP_002211326.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_002211326.1;transl_table=11 NC_014029.1 RefSeq gene 1639165 1640451 . + . ID=gene1504;Name=YPZ3_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07545;old_locus_tag=YPZ3_1270 NC_014029.1 Protein Homology CDS 1639165 1640451 . + 0 ID=cds1480;Parent=gene1504;Dbxref=Genbank:WP_002211325.1;Name=WP_002211325.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002211325.1;transl_table=11 NC_014029.1 RefSeq gene 1640764 1641456 . + . ID=gene1505;Name=YPZ3_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07550;old_locus_tag=YPZ3_1271 NC_014029.1 Protein Homology CDS 1640764 1641456 . + 0 ID=cds1481;Parent=gene1505;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11 NC_014029.1 RefSeq gene 1641630 1643303 . + . ID=gene1506;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YPZ3_RS07555;old_locus_tag=YPZ3_1272 NC_014029.1 Protein Homology CDS 1641630 1643303 . + 0 ID=cds1482;Parent=gene1506;Dbxref=Genbank:WP_002211323.1;Name=WP_002211323.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_002211323.1;transl_table=11 NC_014029.1 RefSeq gene 1643364 1643648 . + . ID=gene1507;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YPZ3_RS07560 NC_014029.1 Protein Homology CDS 1643364 1643648 . + 0 ID=cds1483;Parent=gene1507;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NC_014029.1 RefSeq gene 1643632 1643934 . - . ID=gene1508;Name=YPZ3_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07565 NC_014029.1 Protein Homology CDS 1643632 1643934 . - 0 ID=cds1484;Parent=gene1508;Dbxref=Genbank:WP_002430095.1;Name=WP_002430095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430095.1;transl_table=11 NC_014029.1 RefSeq gene 1644195 1646486 . + . ID=gene1509;Name=YPZ3_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07570;old_locus_tag=YPZ3_1273 NC_014029.1 Protein Homology CDS 1644195 1646486 . + 0 ID=cds1485;Parent=gene1509;Dbxref=Genbank:WP_002211321.1;Name=WP_002211321.1;gbkey=CDS;product=competence protein ComEC;protein_id=WP_002211321.1;transl_table=11 NC_014029.1 RefSeq gene 1646522 1648270 . + . ID=gene1510;Name=YPZ3_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07575;old_locus_tag=YPZ3_1274 NC_014029.1 Protein Homology CDS 1646522 1648270 . + 0 ID=cds1486;Parent=gene1510;Dbxref=Genbank:WP_002211320.1;Name=WP_002211320.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_002211320.1;transl_table=11 NC_014029.1 RefSeq gene 1648267 1649253 . + . ID=gene1511;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YPZ3_RS07580;old_locus_tag=YPZ3_1275 NC_014029.1 Protein Homology CDS 1648267 1649253 . + 0 ID=cds1487;Parent=gene1511;Dbxref=Genbank:WP_002211319.1;Name=WP_002211319.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NC_014029.1 RefSeq gene 1649261 1650688 . - . ID=gene1512;Name=YPZ3_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07585;old_locus_tag=YPZ3_1276 NC_014029.1 Protein Homology CDS 1649261 1650688 . - 0 ID=cds1488;Parent=gene1512;Dbxref=Genbank:WP_002226050.1;Name=WP_002226050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002226050.1;transl_table=11 NC_014029.1 RefSeq gene 1650972 1651169 . - . ID=gene1513;Name=YPZ3_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07590 NC_014029.1 Protein Homology CDS 1650972 1651169 . - 0 ID=cds1489;Parent=gene1513;Dbxref=Genbank:WP_015683832.1;Name=WP_015683832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683832.1;transl_table=11 NC_014029.1 RefSeq gene 1651407 1651616 . + . ID=gene1514;Name=YPZ3_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07595 NC_014029.1 Protein Homology CDS 1651407 1651616 . + 0 ID=cds1490;Parent=gene1514;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NC_014029.1 RefSeq gene 1652164 1652346 . + . ID=gene1515;Name=YPZ3_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07600 NC_014029.1 Protein Homology CDS 1652164 1652346 . + 0 ID=cds1491;Parent=gene1515;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11 NC_014029.1 RefSeq gene 1652343 1653095 . + . ID=gene1516;Name=YPZ3_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07605;old_locus_tag=YPZ3_1277 NC_014029.1 Protein Homology CDS 1652343 1653095 . + 0 ID=cds1492;Parent=gene1516;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NC_014029.1 RefSeq gene 1653458 1654351 . + . ID=gene1517;Name=YPZ3_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07610;old_locus_tag=YPZ3_1278 NC_014029.1 Protein Homology CDS 1653458 1654351 . + 0 ID=cds1493;Parent=gene1517;Dbxref=Genbank:WP_002211313.1;Name=WP_002211313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211313.1;transl_table=11 NC_014029.1 RefSeq gene 1654727 1654879 . - . ID=gene1518;Name=YPZ3_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07615 NC_014029.1 Protein Homology CDS 1654727 1654879 . - 0 ID=cds1494;Parent=gene1518;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11 NC_014029.1 RefSeq gene 1655124 1655909 . + . ID=gene1519;Name=YPZ3_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07620;old_locus_tag=YPZ3_1279 NC_014029.1 Protein Homology CDS 1655124 1655909 . + 0 ID=cds1495;Parent=gene1519;Dbxref=Genbank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_002211311.1;transl_table=11 NC_014029.1 RefSeq gene 1655906 1657228 . + . ID=gene1520;Name=YPZ3_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07625;old_locus_tag=YPZ3_1280 NC_014029.1 Protein Homology CDS 1655906 1657228 . + 0 ID=cds1496;Parent=gene1520;Dbxref=Genbank:WP_002211310.1;Name=WP_002211310.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NC_014029.1 RefSeq gene 1657209 1657937 . + . ID=gene1521;Name=YPZ3_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07630;old_locus_tag=YPZ3_1281 NC_014029.1 Protein Homology CDS 1657209 1657937 . + 0 ID=cds1497;Parent=gene1521;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11 NC_014029.1 RefSeq gene 1657934 1662391 . + . ID=gene1522;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YPZ3_RS07635;old_locus_tag=YPZ3_1282 NC_014029.1 Protein Homology CDS 1657934 1662391 . + 0 ID=cds1498;Parent=gene1522;Dbxref=Genbank:WP_002211308.1;Name=WP_002211308.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_002211308.1;transl_table=11 NC_014029.1 RefSeq gene 1662435 1662617 . + . ID=gene1523;Name=YPZ3_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07640 NC_014029.1 Protein Homology CDS 1662435 1662617 . + 0 ID=cds1499;Parent=gene1523;Dbxref=Genbank:WP_002217988.1;Name=WP_002217988.1;gbkey=CDS;product=invasin;protein_id=WP_002217988.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1662456 1663177 . + . ID=id122;gbkey=repeat_region NC_014029.1 RefSeq gene 1662607 1663065 . + . ID=gene1524;Name=YPZ3_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07645;old_locus_tag=YPZ3_1283 NC_014029.1 Protein Homology CDS 1662607 1663065 . + 0 ID=cds1500;Parent=gene1524;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1663349 1665205 . + . ID=gene1525;Name=YPZ3_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07650;old_locus_tag=YPZ3_1284 NC_014029.1 Protein Homology CDS 1663349 1665205 . + 0 ID=cds1501;Parent=gene1525;Dbxref=Genbank:WP_002217987.1;Name=WP_002217987.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002217987.1;transl_table=11 NC_014029.1 RefSeq gene 1665429 1665977 . + . ID=gene1526;Name=YPZ3_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07655;old_locus_tag=YPZ3_1285 NC_014029.1 Protein Homology CDS 1665429 1665977 . + 0 ID=cds1502;Parent=gene1526;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11 NC_014029.1 RefSeq gene 1666038 1666685 . + . ID=gene1527;Name=YPZ3_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07660;old_locus_tag=YPZ3_1286 NC_014029.1 Protein Homology CDS 1666038 1666685 . + 0 ID=cds1503;Parent=gene1527;Dbxref=Genbank:WP_002211304.1;Name=WP_002211304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211304.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1666884 1667055 . + . ID=id123;gbkey=repeat_region NC_014029.1 RefSeq gene 1667109 1668299 . - . ID=gene1528;Name=YPZ3_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07665;old_locus_tag=YPZ3_1287 NC_014029.1 Protein Homology CDS 1667109 1668299 . - 0 ID=cds1504;Parent=gene1528;Dbxref=Genbank:WP_002211303.1;Name=WP_002211303.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NC_014029.1 RefSeq gene 1668556 1669635 . - . ID=gene1529;Name=YPZ3_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07670;old_locus_tag=YPZ3_1288 NC_014029.1 Protein Homology CDS 1668556 1669635 . - 0 ID=cds1505;Parent=gene1529;Dbxref=Genbank:WP_002354007.1;Name=WP_002354007.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_002354007.1;transl_table=11 NC_014029.1 RefSeq gene 1669936 1671336 . - . ID=gene1530;Name=YPZ3_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07675;old_locus_tag=YPZ3_1289 NC_014029.1 Protein Homology CDS 1669936 1671336 . - 0 ID=cds1506;Parent=gene1530;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NC_014029.1 RefSeq gene 1671835 1673040 . - . ID=gene1531;Name=YPZ3_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07680;old_locus_tag=YPZ3_1290 NC_014029.1 Protein Homology CDS 1671835 1673040 . - 0 ID=cds1507;Parent=gene1531;Dbxref=Genbank:WP_002228013.1;Name=WP_002228013.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NC_014029.1 RefSeq gene 1673756 1676371 . + . ID=gene1532;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YPZ3_RS07685;old_locus_tag=YPZ3_1291 NC_014029.1 Protein Homology CDS 1673756 1676371 . + 0 ID=cds1508;Parent=gene1532;Dbxref=Genbank:WP_002220013.1;Name=WP_002220013.1;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=WP_002220013.1;transl_table=11 NC_014029.1 RefSeq gene 1677025 1678035 . + . ID=gene1533;Name=YPZ3_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07690;old_locus_tag=YPZ3_1292 NC_014029.1 Protein Homology CDS 1677025 1678035 . + 0 ID=cds1509;Parent=gene1533;Dbxref=Genbank:WP_002211296.1;Name=WP_002211296.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11 NC_014029.1 RefSeq gene 1678218 1678769 . + . ID=gene1534;Name=YPZ3_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07695;old_locus_tag=YPZ3_1293 NC_014029.1 Protein Homology CDS 1678218 1678769 . + 0 ID=cds1510;Parent=gene1534;Dbxref=Genbank:WP_002211295.1;Name=WP_002211295.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_002211295.1;transl_table=11 NC_014029.1 RefSeq gene 1678795 1679904 . - . ID=gene1535;Name=YPZ3_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07700;old_locus_tag=YPZ3_1294 NC_014029.1 Protein Homology CDS 1678795 1679904 . - 0 ID=cds1511;Parent=gene1535;Dbxref=Genbank:WP_002363919.1;Name=WP_002363919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002363919.1;transl_table=11 NC_014029.1 RefSeq gene 1680007 1682127 . + . ID=gene1536;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=YPZ3_RS07705;old_locus_tag=YPZ3_1295 NC_014029.1 Protein Homology CDS 1680007 1682127 . + 0 ID=cds1512;Parent=gene1536;Dbxref=Genbank:WP_002211293.1;Name=WP_002211293.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_002211293.1;transl_table=11 NC_014029.1 RefSeq gene 1682133 1684046 . + . ID=gene1537;Name=YPZ3_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07710;old_locus_tag=YPZ3_1296 NC_014029.1 Protein Homology CDS 1682133 1684046 . + 0 ID=cds1513;Parent=gene1537;Dbxref=Genbank:WP_002211292.1;Name=WP_002211292.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=heme ABC transporter ATPase;protein_id=WP_002211292.1;transl_table=11 NC_014029.1 RefSeq gene 1684244 1685461 . + . ID=gene1538;Name=YPZ3_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07715;old_locus_tag=YPZ3_1297 NC_014029.1 Protein Homology CDS 1684244 1685461 . + 0 ID=cds1514;Parent=gene1538;Dbxref=Genbank:WP_002354008.1;Name=WP_002354008.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_002354008.1;transl_table=11 NC_014029.1 RefSeq gene 1685448 1687100 . + . ID=gene1539;Name=YPZ3_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07720;old_locus_tag=YPZ3_1298 NC_014029.1 Protein Homology CDS 1685448 1687100 . + 0 ID=cds1515;Parent=gene1539;Dbxref=Genbank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_002211290.1;transl_table=11 NC_014029.1 RefSeq gene 1687097 1687675 . + . ID=gene1540;Name=YPZ3_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07725;old_locus_tag=YPZ3_1299 NC_014029.1 Protein Homology CDS 1687097 1687675 . + 0 ID=cds1516;Parent=gene1540;Dbxref=Genbank:WP_002211289.1;Name=WP_002211289.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211289.1;transl_table=11 NC_014029.1 RefSeq gene 1687724 1687864 . + . ID=gene1541;Name=YPZ3_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07730 NC_014029.1 Protein Homology CDS 1687724 1687864 . + 0 ID=cds1517;Parent=gene1541;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11 NC_014029.1 RefSeq gene 1687945 1688112 . + . ID=gene1542;Name=YPZ3_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07735 NC_014029.1 Protein Homology CDS 1687945 1688112 . + 0 ID=cds1518;Parent=gene1542;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1688160 1688880 . + . ID=id124;gbkey=repeat_region NC_014029.1 RefSeq gene 1688165 1688320 . + . ID=gene1543;Name=YPZ3_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07740 NC_014029.1 Protein Homology CDS 1688165 1688320 . + 0 ID=cds1519;Parent=gene1543;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 1688310 1688768 . + . ID=gene1544;Name=YPZ3_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07745;old_locus_tag=YPZ3_1300 NC_014029.1 Protein Homology CDS 1688310 1688768 . + 0 ID=cds1520;Parent=gene1544;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1688885 1689859 . - . ID=gene1545;Name=YPZ3_RS07750;end_range=1689859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS07750;old_locus_tag=YPZ3_1301;partial=true;pseudo=true NC_014029.1 Protein Homology CDS 1688885 1689859 . - 0 ID=cds1521;Parent=gene1545;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;end_range=1689859,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=3-oxoacyl-ACP synthase;pseudo=true;transl_table=11 NC_014029.1 RefSeq repeat_region 1689854 1691820 . + . ID=id125;gbkey=repeat_region NC_014029.1 RefSeq gene 1689929 1690708 . - . ID=gene1546;Name=YPZ3_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07755;old_locus_tag=YPZ3_1302 NC_014029.1 Protein Homology CDS 1689929 1690708 . - 0 ID=cds1522;Parent=gene1546;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 1690708 1691730 . - . ID=gene1547;Name=YPZ3_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07760;old_locus_tag=YPZ3_1303 NC_014029.1 Protein Homology CDS 1690708 1691730 . - 0 ID=cds1523;Parent=gene1547;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 1691744 1692118 . - . ID=gene1548;Name=YPZ3_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07765;old_locus_tag=YPZ3_1304 NC_014029.1 Protein Homology CDS 1691744 1692118 . - 0 ID=cds1524;Parent=gene1548;Dbxref=Genbank:WP_002211287.1;Name=WP_002211287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211287.1;transl_table=11 NC_014029.1 RefSeq gene 1692364 1692552 . + . ID=gene1549;Name=YPZ3_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07770 NC_014029.1 Protein Homology CDS 1692364 1692552 . + 0 ID=cds1525;Parent=gene1549;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11 NC_014029.1 RefSeq gene 1692818 1693336 . - . ID=gene1550;Name=YPZ3_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07775;old_locus_tag=YPZ3_1305 NC_014029.1 Protein Homology CDS 1692818 1693336 . - 0 ID=cds1526;Parent=gene1550;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11 NC_014029.1 RefSeq gene 1693405 1695156 . - . ID=gene1551;Name=YPZ3_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07780;old_locus_tag=YPZ3_1306 NC_014029.1 Protein Homology CDS 1693405 1695156 . - 0 ID=cds1527;Parent=gene1551;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11 NC_014029.1 RefSeq gene 1695367 1695822 . + . ID=gene1552;Name=YPZ3_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07785;old_locus_tag=YPZ3_1307 NC_014029.1 Protein Homology CDS 1695367 1695822 . + 0 ID=cds1528;Parent=gene1552;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1695879 1696603 . + . ID=id126;gbkey=repeat_region NC_014029.1 RefSeq gene 1695991 1696449 . - . ID=gene1553;Name=YPZ3_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07790;old_locus_tag=YPZ3_1308 NC_014029.1 Protein Homology CDS 1695991 1696449 . - 0 ID=cds1529;Parent=gene1553;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1696439 1696594 . - . ID=gene1554;Name=YPZ3_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07795 NC_014029.1 Protein Homology CDS 1696439 1696594 . - 0 ID=cds1530;Parent=gene1554;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 1696639 1697700 . - . ID=gene1555;Name=YPZ3_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07800;old_locus_tag=YPZ3_1309 NC_014029.1 Protein Homology CDS 1696639 1697700 . - 0 ID=cds1531;Parent=gene1555;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11 NC_014029.1 RefSeq gene 1698058 1698564 . - . ID=gene1556;Name=YPZ3_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07805;old_locus_tag=YPZ3_1310 NC_014029.1 Protein Homology CDS 1698058 1698564 . - 0 ID=cds1532;Parent=gene1556;Dbxref=Genbank:WP_002213065.1;Name=WP_002213065.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_002213065.1;transl_table=11 NC_014029.1 RefSeq gene 1698793 1699428 . + . ID=gene1557;Name=YPZ3_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07810;old_locus_tag=YPZ3_1311 NC_014029.1 Protein Homology CDS 1698793 1699428 . + 0 ID=cds1533;Parent=gene1557;Dbxref=Genbank:WP_002213064.1;Name=WP_002213064.1;gbkey=CDS;product=DNA transformation protein tfoX;protein_id=WP_002213064.1;transl_table=11 NC_014029.1 RefSeq gene 1699530 1701668 . - . ID=gene1558;Name=YPZ3_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07815;old_locus_tag=YPZ3_1312 NC_014029.1 Protein Homology CDS 1699530 1701668 . - 0 ID=cds1534;Parent=gene1558;Dbxref=Genbank:WP_002213063.1;Name=WP_002213063.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213063.1;transl_table=11 NC_014029.1 RefSeq gene 1701698 1702144 . - . ID=gene1559;Name=YPZ3_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07820;old_locus_tag=YPZ3_1313 NC_014029.1 Protein Homology CDS 1701698 1702144 . - 0 ID=cds1535;Parent=gene1559;Dbxref=Genbank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213062.1;transl_table=11 NC_014029.1 RefSeq gene 1702338 1704392 . + . ID=gene1560;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YPZ3_RS07825;old_locus_tag=YPZ3_1314 NC_014029.1 Protein Homology CDS 1702338 1704392 . + 0 ID=cds1536;Parent=gene1560;Dbxref=Genbank:WP_002221095.1;Name=WP_002221095.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_002221095.1;transl_table=11 NC_014029.1 RefSeq gene 1704453 1704917 . - . ID=gene1561;Name=YPZ3_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07830;old_locus_tag=YPZ3_1315 NC_014029.1 Protein Homology CDS 1704453 1704917 . - 0 ID=cds1537;Parent=gene1561;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NC_014029.1 RefSeq gene 1705096 1705776 . - . ID=gene1562;Name=YPZ3_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07835;old_locus_tag=YPZ3_1316 NC_014029.1 Protein Homology CDS 1705096 1705776 . - 0 ID=cds1538;Parent=gene1562;Dbxref=Genbank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213058.1;transl_table=11 NC_014029.1 RefSeq gene 1706092 1706508 . + . ID=gene1563;Name=YPZ3_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07840;old_locus_tag=YPZ3_1317 NC_014029.1 Protein Homology CDS 1706092 1706508 . + 0 ID=cds1539;Parent=gene1563;Dbxref=Genbank:WP_002213056.1;Name=WP_002213056.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213056.1;transl_table=11 NC_014029.1 RefSeq gene 1706617 1706934 . - . ID=gene1564;Name=YPZ3_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07845;old_locus_tag=YPZ3_1318 NC_014029.1 Protein Homology CDS 1706617 1706934 . - 0 ID=cds1540;Parent=gene1564;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NC_014029.1 RefSeq gene 1706995 1708185 . - . ID=gene1565;Name=YPZ3_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07850;old_locus_tag=YPZ3_1319 NC_014029.1 Protein Homology CDS 1706995 1708185 . - 0 ID=cds1541;Parent=gene1565;Dbxref=Genbank:WP_002213052.1;Name=WP_002213052.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_002213052.1;transl_table=11 NC_014029.1 RefSeq gene 1708279 1708557 . + . ID=gene1566;Name=YPZ3_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07855 NC_014029.1 Protein Homology CDS 1708279 1708557 . + 0 ID=cds1542;Parent=gene1566;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NC_014029.1 RefSeq gene 1708609 1708938 . - . ID=gene1567;Name=YPZ3_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07860;old_locus_tag=YPZ3_1320 NC_014029.1 Protein Homology CDS 1708609 1708938 . - 0 ID=cds1543;Parent=gene1567;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NC_014029.1 RefSeq gene 1709179 1709266 . + . ID=gene1568;Name=YPZ3_RS07865;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS07865;old_locus_tag=YPZ3_t18 NC_014029.1 tRNAscan-SE tRNA 1709179 1709266 . + . ID=rna23;Parent=gene1568;anticodon=(pos:1709213..1709215);gbkey=tRNA;product=tRNA-Ser NC_014029.1 tRNAscan-SE exon 1709179 1709266 . + . ID=id127;Parent=rna23;anticodon=(pos:1709213..1709215);gbkey=tRNA;product=tRNA-Ser NC_014029.1 RefSeq gene 1709686 1709973 . + . ID=gene1569;Name=YPZ3_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07870 NC_014029.1 Protein Homology CDS 1709686 1709973 . + 0 ID=cds1544;Parent=gene1569;Dbxref=Genbank:WP_002228572.1;Name=WP_002228572.1;gbkey=CDS;product=integrase;protein_id=WP_002228572.1;transl_table=11 NC_014029.1 RefSeq gene 1710343 1710699 . + . ID=gene1570;Name=YPZ3_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07875;old_locus_tag=YPZ3_1321 NC_014029.1 Protein Homology CDS 1710343 1710699 . + 0 ID=cds1545;Parent=gene1570;Dbxref=Genbank:WP_002214713.1;Name=WP_002214713.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002214713.1;transl_table=11 NC_014029.1 RefSeq gene 1710733 1710984 . + . ID=gene1571;Name=YPZ3_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07880 NC_014029.1 Protein Homology CDS 1710733 1710984 . + 0 ID=cds1546;Parent=gene1571;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11 NC_014029.1 RefSeq gene 1710999 1712150 . + . ID=gene1572;Name=YPZ3_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07885;old_locus_tag=YPZ3_1322 NC_014029.1 Protein Homology CDS 1710999 1712150 . + 0 ID=cds1547;Parent=gene1572;Dbxref=Genbank:WP_002358281.1;Name=WP_002358281.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002358281.1;transl_table=11 NC_014029.1 RefSeq gene 1712584 1715001 . - . ID=gene1573;Name=YPZ3_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07890;old_locus_tag=YPZ3_1323 NC_014029.1 Protein Homology CDS 1712584 1715001 . - 0 ID=cds1548;Parent=gene1573;Dbxref=Genbank:WP_002213039.1;Name=WP_002213039.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213039.1;transl_table=11 NC_014029.1 RefSeq gene 1715155 1715901 . - . ID=gene1574;Name=YPZ3_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07895;old_locus_tag=YPZ3_1324 NC_014029.1 Protein Homology CDS 1715155 1715901 . - 0 ID=cds1549;Parent=gene1574;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11 NC_014029.1 RefSeq gene 1716632 1716850 . + . ID=gene1575;Name=YPZ3_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07900 NC_014029.1 Protein Homology CDS 1716632 1716850 . + 0 ID=cds1550;Parent=gene1575;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NC_014029.1 RefSeq gene 1717114 1717638 . + . ID=gene1576;Name=YPZ3_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07905;old_locus_tag=YPZ3_1325 NC_014029.1 Protein Homology CDS 1717114 1717638 . + 0 ID=cds1551;Parent=gene1576;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11 NC_014029.1 RefSeq gene 1717628 1718911 . + . ID=gene1577;Name=YPZ3_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07910;old_locus_tag=YPZ3_1326 NC_014029.1 Protein Homology CDS 1717628 1718911 . + 0 ID=cds1552;Parent=gene1577;Dbxref=Genbank:WP_002213032.1;Name=WP_002213032.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_002213032.1;transl_table=11 NC_014029.1 RefSeq gene 1718913 1719650 . + . ID=gene1578;Name=YPZ3_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07915;old_locus_tag=YPZ3_1327 NC_014029.1 Protein Homology CDS 1718913 1719650 . + 0 ID=cds1553;Parent=gene1578;Dbxref=Genbank:WP_002213030.1;Name=WP_002213030.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_002213030.1;transl_table=11 NC_014029.1 RefSeq gene 1719666 1720904 . + . ID=gene1579;Name=YPZ3_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07920;old_locus_tag=YPZ3_1328 NC_014029.1 Protein Homology CDS 1719666 1720904 . + 0 ID=cds1554;Parent=gene1579;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11 NC_014029.1 RefSeq gene 1720897 1721616 . + . ID=gene1580;Name=YPZ3_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07925;old_locus_tag=YPZ3_1329 NC_014029.1 Protein Homology CDS 1720897 1721616 . + 0 ID=cds1555;Parent=gene1580;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11 NC_014029.1 RefSeq gene 1721618 1722370 . + . ID=gene1581;Name=YPZ3_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07930;old_locus_tag=YPZ3_1330 NC_014029.1 Protein Homology CDS 1721618 1722370 . + 0 ID=cds1556;Parent=gene1581;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11 NC_014029.1 RefSeq gene 1722373 1723161 . + . ID=gene1582;Name=YPZ3_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07935;old_locus_tag=YPZ3_1331 NC_014029.1 Protein Homology CDS 1722373 1723161 . + 0 ID=cds1557;Parent=gene1582;Dbxref=Genbank:WP_002213024.1;Name=WP_002213024.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002213024.1;transl_table=11 NC_014029.1 RefSeq gene 1723356 1723688 . + . ID=gene1583;Name=YPZ3_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07940;old_locus_tag=YPZ3_1332 NC_014029.1 Protein Homology CDS 1723356 1723688 . + 0 ID=cds1558;Parent=gene1583;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11 NC_014029.1 RefSeq gene 1723726 1723974 . + . ID=gene1584;Name=YPZ3_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07945 NC_014029.1 Protein Homology CDS 1723726 1723974 . + 0 ID=cds1559;Parent=gene1584;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11 NC_014029.1 RefSeq gene 1724073 1724921 . + . ID=gene1585;Name=YPZ3_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07950;old_locus_tag=YPZ3_1333 NC_014029.1 Protein Homology CDS 1724073 1724921 . + 0 ID=cds1560;Parent=gene1585;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11 NC_014029.1 RefSeq gene 1725078 1725245 . + . ID=gene1586;Name=YPZ3_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07955 NC_014029.1 Protein Homology CDS 1725078 1725245 . + 0 ID=cds1561;Parent=gene1586;Dbxref=Genbank:WP_002214708.1;Name=WP_002214708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214708.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1725483 1732351 . + . ID=id128;gbkey=repeat_region NC_014029.1 RefSeq gene 1725910 1726410 . + . ID=gene1587;Name=YPZ3_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07960;old_locus_tag=YPZ3_1334 NC_014029.1 Protein Homology CDS 1725910 1726410 . + 0 ID=cds1562;Parent=gene1587;Dbxref=Genbank:WP_002213014.1;Name=WP_002213014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213014.1;transl_table=11 NC_014029.1 RefSeq gene 1726453 1727997 . + . ID=gene1588;Name=YPZ3_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07965;old_locus_tag=YPZ3_1335 NC_014029.1 Protein Homology CDS 1726453 1727997 . + 0 ID=cds1563;Parent=gene1588;Dbxref=Genbank:WP_002215896.1;Name=WP_002215896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215896.1;transl_table=11 NC_014029.1 RefSeq gene 1728009 1729361 . + . ID=gene1589;Name=YPZ3_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07970;old_locus_tag=YPZ3_1336 NC_014029.1 Protein Homology CDS 1728009 1729361 . + 0 ID=cds1564;Parent=gene1589;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11 NC_014029.1 RefSeq gene 1729358 1730044 . + . ID=gene1590;Name=YPZ3_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07975;old_locus_tag=YPZ3_1337 NC_014029.1 Protein Homology CDS 1729358 1730044 . + 0 ID=cds1565;Parent=gene1590;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_014029.1 RefSeq gene 1730044 1731780 . + . ID=gene1591;Name=YPZ3_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07980;old_locus_tag=YPZ3_1338 NC_014029.1 Protein Homology CDS 1730044 1731780 . + 0 ID=cds1566;Parent=gene1591;Dbxref=Genbank:WP_002214568.1;Name=WP_002214568.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214568.1;transl_table=11 NC_014029.1 RefSeq gene 1731784 1732275 . + . ID=gene1592;Name=YPZ3_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07985;old_locus_tag=YPZ3_1339 NC_014029.1 Protein Homology CDS 1731784 1732275 . + 0 ID=cds1567;Parent=gene1592;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1732674 1734378 . + . ID=id129;gbkey=repeat_region NC_014029.1 RefSeq gene 1732693 1735341 . + . ID=gene1593;Name=YPZ3_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07990;old_locus_tag=YPZ3_1340 NC_014029.1 Protein Homology CDS 1732693 1735341 . + 0 ID=cds1568;Parent=gene1593;Dbxref=Genbank:WP_002210013.1;Name=WP_002210013.1;gbkey=CDS;product=ATPase;protein_id=WP_002210013.1;transl_table=11 NC_014029.1 RefSeq gene 1735338 1737686 . + . ID=gene1594;Name=YPZ3_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS07995;old_locus_tag=YPZ3_1341 NC_014029.1 Protein Homology CDS 1735338 1737686 . + 0 ID=cds1569;Parent=gene1594;Dbxref=Genbank:WP_002210012.1;Name=WP_002210012.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210012.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1737045 1737601 . + . ID=id130;gbkey=repeat_region NC_014029.1 RefSeq gene 1737701 1739923 . + . ID=gene1595;Name=YPZ3_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08000;old_locus_tag=YPZ3_1342 NC_014029.1 Protein Homology CDS 1737701 1739923 . + 0 ID=cds1570;Parent=gene1595;Dbxref=Genbank:WP_002210011.1;Name=WP_002210011.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_002210011.1;transl_table=11 NC_014029.1 RefSeq gene 1740067 1740423 . + . ID=gene1596;Name=YPZ3_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08005 NC_014029.1 Protein Homology CDS 1740067 1740423 . + 0 ID=cds1571;Parent=gene1596;Dbxref=Genbank:WP_016257642.1;Name=WP_016257642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257642.1;transl_table=11 NC_014029.1 RefSeq gene 1740597 1740791 . + . ID=gene1597;Name=YPZ3_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08010 NC_014029.1 Protein Homology CDS 1740597 1740791 . + 0 ID=cds1572;Parent=gene1597;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1740759 1741392 . + . ID=id131;gbkey=repeat_region NC_014029.1 RefSeq gene 1740820 1741095 . + . ID=gene1598;Name=YPZ3_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08015 NC_014029.1 Protein Homology CDS 1740820 1741095 . + 0 ID=cds1573;Parent=gene1598;Dbxref=Genbank:WP_002216108.1;Name=WP_002216108.1;gbkey=CDS;product=transposase;protein_id=WP_002216108.1;transl_table=11 NC_014029.1 RefSeq gene 1741149 1741484 . + . ID=gene1599;Name=YPZ3_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08020 NC_014029.1 Protein Homology CDS 1741149 1741484 . + 0 ID=cds1574;Parent=gene1599;Dbxref=Genbank:WP_002216107.1;Name=WP_002216107.1;gbkey=CDS;product=transposase;protein_id=WP_002216107.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1741406 1744133 . + . ID=id132;gbkey=repeat_region NC_014029.1 RefSeq gene 1742016 1742651 . + . ID=gene1600;Name=YPZ3_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08025;old_locus_tag=YPZ3_1343 NC_014029.1 Protein Homology CDS 1742016 1742651 . + 0 ID=cds1575;Parent=gene1600;Dbxref=Genbank:WP_002210010.1;Name=WP_002210010.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210010.1;transl_table=11 NC_014029.1 RefSeq gene 1742667 1744967 . + . ID=gene1601;Name=YPZ3_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08030;old_locus_tag=YPZ3_1344 NC_014029.1 Protein Homology CDS 1742667 1744967 . + 0 ID=cds1576;Parent=gene1601;Dbxref=Genbank:WP_013060322.1;Name=WP_013060322.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060322.1;transl_table=11 NC_014029.1 RefSeq gene 1744964 1745737 . + . ID=gene1602;Name=YPZ3_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08035;old_locus_tag=YPZ3_1345 NC_014029.1 Protein Homology CDS 1744964 1745737 . + 0 ID=cds1577;Parent=gene1602;Dbxref=Genbank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11 NC_014029.1 RefSeq gene 1745891 1746151 . + . ID=gene1603;Name=YPZ3_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08040 NC_014029.1 Protein Homology CDS 1745891 1746151 . + 0 ID=cds1578;Parent=gene1603;Dbxref=Genbank:WP_002211931.1;Name=WP_002211931.1;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=WP_002211931.1;transl_table=11 NC_014029.1 RefSeq gene 1746167 1748350 . + . ID=gene1604;Name=YPZ3_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08045;old_locus_tag=YPZ3_1346 NC_014029.1 Protein Homology CDS 1746167 1748350 . + 0 ID=cds1579;Parent=gene1604;Dbxref=Genbank:WP_002211932.1;Name=WP_002211932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211932.1;transl_table=11 NC_014029.1 RefSeq gene 1748523 1748993 . + . ID=gene1605;Name=YPZ3_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08050 NC_014029.1 Protein Homology CDS 1748523 1748993 . + 0 ID=cds1580;Parent=gene1605;Dbxref=Genbank:WP_002214564.1;Name=WP_002214564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214564.1;transl_table=11 NC_014029.1 RefSeq gene 1749726 1750046 . - . ID=gene1606;Name=YPZ3_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08055;old_locus_tag=YPZ3_1347 NC_014029.1 Protein Homology CDS 1749726 1750046 . - 0 ID=cds1581;Parent=gene1606;Dbxref=Genbank:WP_002214561.1;Name=WP_002214561.1;gbkey=CDS;product=transposase;protein_id=WP_002214561.1;transl_table=11 NC_014029.1 RefSeq gene 1751158 1752390 . + . ID=gene1607;Name=YPZ3_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08060;old_locus_tag=YPZ3_1348 NC_014029.1 Protein Homology CDS 1751158 1752390 . + 0 ID=cds1582;Parent=gene1607;Dbxref=Genbank:WP_002211935.1;Name=WP_002211935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211935.1;transl_table=11 NC_014029.1 RefSeq gene 1752387 1755809 . + . ID=gene1608;Name=YPZ3_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08065;old_locus_tag=YPZ3_1349 NC_014029.1 Protein Homology CDS 1752387 1755809 . + 0 ID=cds1583;Parent=gene1608;Dbxref=Genbank:WP_002211936.1;Name=WP_002211936.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_002211936.1;transl_table=11 NC_014029.1 RefSeq gene 1755853 1757454 . + . ID=gene1609;Name=YPZ3_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08070;old_locus_tag=YPZ3_1350 NC_014029.1 Protein Homology CDS 1755853 1757454 . + 0 ID=cds1584;Parent=gene1609;Dbxref=Genbank:WP_002211937.1;Name=WP_002211937.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211937.1;transl_table=11 NC_014029.1 RefSeq gene 1757472 1758530 . + . ID=gene1610;Name=YPZ3_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08075;old_locus_tag=YPZ3_1351 NC_014029.1 Protein Homology CDS 1757472 1758530 . + 0 ID=cds1585;Parent=gene1610;Dbxref=Genbank:WP_002211938.1;Name=WP_002211938.1;gbkey=CDS;product=PAAR domain protein;protein_id=WP_002211938.1;transl_table=11 NC_014029.1 RefSeq gene 1758545 1759000 . + . ID=gene1611;Name=YPZ3_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08080;old_locus_tag=YPZ3_1352 NC_014029.1 Protein Homology CDS 1758545 1759000 . + 0 ID=cds1586;Parent=gene1611;Dbxref=Genbank:WP_002211939.1;Name=WP_002211939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211939.1;transl_table=11 NC_014029.1 RefSeq gene 1759221 1760984 . + . ID=gene1612;Name=YPZ3_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08085;old_locus_tag=YPZ3_1353 NC_014029.1 Protein Homology CDS 1759221 1760984 . + 0 ID=cds1587;Parent=gene1612;Dbxref=Genbank:WP_002211940.1;Name=WP_002211940.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002211940.1;transl_table=11 NC_014029.1 RefSeq gene 1760948 1762033 . + . ID=gene1613;Name=YPZ3_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08090;old_locus_tag=YPZ3_1354 NC_014029.1 Protein Homology CDS 1760948 1762033 . + 0 ID=cds1588;Parent=gene1613;Dbxref=Genbank:WP_002211941.1;Name=WP_002211941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211941.1;transl_table=11 NC_014029.1 RefSeq gene 1762008 1762589 . + . ID=gene1614;Name=YPZ3_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08095;old_locus_tag=YPZ3_1355 NC_014029.1 Protein Homology CDS 1762008 1762589 . + 0 ID=cds1589;Parent=gene1614;Dbxref=Genbank:WP_002214552.1;Name=WP_002214552.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214552.1;transl_table=11 NC_014029.1 RefSeq gene 1762589 1763041 . + . ID=gene1615;Name=YPZ3_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08100;old_locus_tag=YPZ3_1356 NC_014029.1 Protein Homology CDS 1762589 1763041 . + 0 ID=cds1590;Parent=gene1615;Dbxref=Genbank:WP_002211943.1;Name=WP_002211943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211943.1;transl_table=11 NC_014029.1 RefSeq gene 1763066 1764433 . + . ID=gene1616;Name=YPZ3_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08105;old_locus_tag=YPZ3_1357 NC_014029.1 Protein Homology CDS 1763066 1764433 . + 0 ID=cds1591;Parent=gene1616;Dbxref=Genbank:WP_002211944.1;Name=WP_002211944.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211944.1;transl_table=11 NC_014029.1 RefSeq gene 1764645 1765268 . - . ID=gene1617;Name=YPZ3_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08110;old_locus_tag=YPZ3_1358 NC_014029.1 Protein Homology CDS 1764645 1765268 . - 0 ID=cds1592;Parent=gene1617;Dbxref=Genbank:WP_002211945.1;Name=WP_002211945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211945.1;transl_table=11 NC_014029.1 RefSeq gene 1765975 1767546 . + . ID=gene1618;Name=YPZ3_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08115;old_locus_tag=YPZ3_1359 NC_014029.1 Protein Homology CDS 1765975 1767546 . + 0 ID=cds1593;Parent=gene1618;Dbxref=Genbank:WP_002354043.1;Name=WP_002354043.1;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_002354043.1;transl_table=11 NC_014029.1 RefSeq gene 1767774 1768427 . + . ID=gene1619;Name=YPZ3_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08120;old_locus_tag=YPZ3_1360 NC_014029.1 Protein Homology CDS 1767774 1768427 . + 0 ID=cds1594;Parent=gene1619;Dbxref=Genbank:WP_002211947.1;Name=WP_002211947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211947.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1768434 1769754 . + . ID=id133;gbkey=repeat_region NC_014029.1 RefSeq gene 1768471 1769679 . - . ID=gene1620;Name=YPZ3_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08125;old_locus_tag=YPZ3_1361 NC_014029.1 Protein Homology CDS 1768471 1769679 . - 0 ID=cds1595;Parent=gene1620;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 1769815 1770585 . - . ID=gene1621;Name=YPZ3_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08130;old_locus_tag=YPZ3_1362 NC_014029.1 Protein Homology CDS 1769815 1770585 . - 0 ID=cds1596;Parent=gene1621;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11 NC_014029.1 RefSeq gene 1770587 1771861 . - . ID=gene1622;Name=YPZ3_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08135;old_locus_tag=YPZ3_1363 NC_014029.1 Protein Homology CDS 1770587 1771861 . - 0 ID=cds1597;Parent=gene1622;Dbxref=Genbank:WP_002211949.1;Name=WP_002211949.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_002211949.1;transl_table=11 NC_014029.1 RefSeq gene 1772396 1773706 . - . ID=gene1623;Name=YPZ3_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08140;old_locus_tag=YPZ3_1364 NC_014029.1 Protein Homology CDS 1772396 1773706 . - 0 ID=cds1598;Parent=gene1623;Dbxref=Genbank:WP_002211950.1;Name=WP_002211950.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002211950.1;transl_table=11 NC_014029.1 RefSeq gene 1773716 1774384 . - . ID=gene1624;Name=YPZ3_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08145;old_locus_tag=YPZ3_1365 NC_014029.1 Protein Homology CDS 1773716 1774384 . - 0 ID=cds1599;Parent=gene1624;Dbxref=Genbank:WP_002211951.1;Name=WP_002211951.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211951.1;transl_table=11 NC_014029.1 RefSeq gene 1774386 1775648 . - . ID=gene1625;Name=YPZ3_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08150;old_locus_tag=YPZ3_1366 NC_014029.1 Protein Homology CDS 1774386 1775648 . - 0 ID=cds1600;Parent=gene1625;Dbxref=Genbank:WP_002211952.1;Name=WP_002211952.1;gbkey=CDS;product=RND transporter;protein_id=WP_002211952.1;transl_table=11 NC_014029.1 RefSeq gene 1775650 1778010 . - . ID=gene1626;Name=YPZ3_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08155;old_locus_tag=YPZ3_1367 NC_014029.1 Protein Homology CDS 1775650 1778010 . - 0 ID=cds1601;Parent=gene1626;Dbxref=Genbank:WP_002215886.1;Name=WP_002215886.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215886.1;transl_table=11 NC_014029.1 RefSeq gene 1778094 1778294 . - . ID=gene1627;Name=YPZ3_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08160 NC_014029.1 Protein Homology CDS 1778094 1778294 . - 0 ID=cds1602;Parent=gene1627;Dbxref=Genbank:WP_002211954.1;Name=WP_002211954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211954.1;transl_table=11 NC_014029.1 RefSeq gene 1778563 1779405 . - . ID=gene1628;Name=YPZ3_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08170;old_locus_tag=YPZ3_1368 NC_014029.1 Protein Homology CDS 1778563 1779405 . - 0 ID=cds1603;Parent=gene1628;Dbxref=Genbank:WP_002211956.1;Name=WP_002211956.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_002211956.1;transl_table=11 NC_014029.1 RefSeq gene 1779426 1780565 . - . ID=gene1629;Name=YPZ3_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08175;old_locus_tag=YPZ3_1369 NC_014029.1 Protein Homology CDS 1779426 1780565 . - 0 ID=cds1604;Parent=gene1629;Dbxref=Genbank:WP_002211957.1;Name=WP_002211957.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002211957.1;transl_table=11 NC_014029.1 RefSeq gene 1780839 1781708 . - . ID=gene1630;Name=YPZ3_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08180;old_locus_tag=YPZ3_1370 NC_014029.1 Protein Homology CDS 1780839 1781708 . - 0 ID=cds1605;Parent=gene1630;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11 NC_014029.1 RefSeq gene 1781844 1782995 . + . ID=gene1631;Name=YPZ3_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08185;old_locus_tag=YPZ3_1371 NC_014029.1 Protein Homology CDS 1781844 1782995 . + 0 ID=cds1606;Parent=gene1631;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11 NC_014029.1 RefSeq gene 1783179 1783841 . + . ID=gene1632;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YPZ3_RS08190;old_locus_tag=YPZ3_1372 NC_014029.1 Protein Homology CDS 1783179 1783841 . + 0 ID=cds1607;Parent=gene1632;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11 NC_014029.1 RefSeq gene 1783896 1785062 . + . ID=gene1633;Name=YPZ3_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08195;old_locus_tag=YPZ3_1373 NC_014029.1 Protein Homology CDS 1783896 1785062 . + 0 ID=cds1608;Parent=gene1633;Dbxref=Genbank:WP_002211961.1;Name=WP_002211961.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211961.1;transl_table=11 NC_014029.1 RefSeq gene 1785810 1786802 . + . ID=gene1634;Name=YPZ3_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08200;old_locus_tag=YPZ3_1374 NC_014029.1 Protein Homology CDS 1785810 1786802 . + 0 ID=cds1609;Parent=gene1634;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11 NC_014029.1 RefSeq gene 1787032 1788552 . + . ID=gene1635;Name=YPZ3_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08205;old_locus_tag=YPZ3_1375 NC_014029.1 Protein Homology CDS 1787032 1788552 . + 0 ID=cds1610;Parent=gene1635;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NC_014029.1 RefSeq gene 1788573 1789583 . + . ID=gene1636;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YPZ3_RS08210;old_locus_tag=YPZ3_1376 NC_014029.1 Protein Homology CDS 1788573 1789583 . + 0 ID=cds1611;Parent=gene1636;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11 NC_014029.1 RefSeq gene 1790028 1790765 . - . ID=gene1637;Name=YPZ3_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08215;old_locus_tag=YPZ3_1377 NC_014029.1 Protein Homology CDS 1790028 1790765 . - 0 ID=cds1612;Parent=gene1637;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11 NC_014029.1 RefSeq gene 1791046 1792743 . - . ID=gene1638;Name=YPZ3_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08220;old_locus_tag=YPZ3_1378 NC_014029.1 Protein Homology CDS 1791046 1792743 . - 0 ID=cds1613;Parent=gene1638;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NC_014029.1 RefSeq gene 1793099 1793983 . - . ID=gene1639;Name=YPZ3_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08225;old_locus_tag=YPZ3_1379 NC_014029.1 Protein Homology CDS 1793099 1793983 . - 0 ID=cds1614;Parent=gene1639;Dbxref=Genbank:WP_002211969.1;Name=WP_002211969.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NC_014029.1 RefSeq gene 1794309 1795004 . - . ID=gene1640;Name=YPZ3_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08230;old_locus_tag=YPZ3_1380 NC_014029.1 Protein Homology CDS 1794309 1795004 . - 0 ID=cds1615;Parent=gene1640;Dbxref=Genbank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211970.1;transl_table=11 NC_014029.1 RefSeq gene 1795001 1795408 . - . ID=gene1641;Name=YPZ3_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08235;old_locus_tag=YPZ3_1381 NC_014029.1 Protein Homology CDS 1795001 1795408 . - 0 ID=cds1616;Parent=gene1641;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11 NC_014029.1 RefSeq gene 1795650 1796831 . - . ID=gene1642;Name=YPZ3_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08240;old_locus_tag=YPZ3_1382 NC_014029.1 Protein Homology CDS 1795650 1796831 . - 0 ID=cds1617;Parent=gene1642;Dbxref=Genbank:WP_002211973.1;Name=WP_002211973.1;gbkey=CDS;product=multidrug resistance protein;protein_id=WP_002211973.1;transl_table=11 NC_014029.1 RefSeq gene 1797164 1798417 . - . ID=gene1643;Name=YPZ3_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08245;old_locus_tag=YPZ3_1383 NC_014029.1 Protein Homology CDS 1797164 1798417 . - 0 ID=cds1618;Parent=gene1643;Dbxref=Genbank:WP_002211974.1;Name=WP_002211974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211974.1;transl_table=11 NC_014029.1 RefSeq gene 1798435 1799511 . - . ID=gene1644;Name=YPZ3_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08250;old_locus_tag=YPZ3_1384 NC_014029.1 Protein Homology CDS 1798435 1799511 . - 0 ID=cds1619;Parent=gene1644;Dbxref=Genbank:WP_002211975.1;Name=WP_002211975.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002211975.1;transl_table=11 NC_014029.1 RefSeq gene 1800209 1800871 . + . ID=gene1645;Name=YPZ3_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08255;old_locus_tag=YPZ3_1385 NC_014029.1 Protein Homology CDS 1800209 1800871 . + 0 ID=cds1620;Parent=gene1645;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11 NC_014029.1 RefSeq gene 1800911 1801099 . + . ID=gene1646;Name=YPZ3_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08260 NC_014029.1 Protein Homology CDS 1800911 1801099 . + 0 ID=cds1621;Parent=gene1646;Dbxref=Genbank:WP_011171814.1;Name=WP_011171814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171814.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1800935 1801658 . + . ID=id134;gbkey=repeat_region NC_014029.1 RefSeq gene 1801089 1801547 . + . ID=gene1647;Name=YPZ3_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08265;old_locus_tag=YPZ3_1386 NC_014029.1 Protein Homology CDS 1801089 1801547 . + 0 ID=cds1622;Parent=gene1647;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1801711 1803738 . - . ID=gene1648;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YPZ3_RS08270;old_locus_tag=YPZ3_1387 NC_014029.1 Protein Homology CDS 1801711 1803738 . - 0 ID=cds1623;Parent=gene1648;Dbxref=Genbank:WP_002211870.1;Name=WP_002211870.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_002211870.1;transl_table=11 NC_014029.1 RefSeq gene 1804003 1805115 . + . ID=gene1649;Name=YPZ3_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08275;old_locus_tag=YPZ3_1388 NC_014029.1 Protein Homology CDS 1804003 1805115 . + 0 ID=cds1624;Parent=gene1649;Dbxref=Genbank:WP_002211871.1;Name=WP_002211871.1;gbkey=CDS;product=ATPase;protein_id=WP_002211871.1;transl_table=11 NC_014029.1 RefSeq gene 1805360 1806001 . + . ID=gene1650;Name=YPZ3_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08280;old_locus_tag=YPZ3_1389 NC_014029.1 Protein Homology CDS 1805360 1806001 . + 0 ID=cds1625;Parent=gene1650;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NC_014029.1 RefSeq gene 1806106 1806687 . + . ID=gene1651;Name=YPZ3_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08285;old_locus_tag=YPZ3_1390 NC_014029.1 Protein Homology CDS 1806106 1806687 . + 0 ID=cds1626;Parent=gene1651;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11 NC_014029.1 RefSeq gene 1806874 1808730 . + . ID=gene1652;Name=YPZ3_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08290;old_locus_tag=YPZ3_1391 NC_014029.1 Protein Homology CDS 1806874 1808730 . + 0 ID=cds1627;Parent=gene1652;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NC_014029.1 RefSeq gene 1808875 1810488 . - . ID=gene1653;Name=YPZ3_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08295;old_locus_tag=YPZ3_1392 NC_014029.1 Protein Homology CDS 1808875 1810488 . - 0 ID=cds1628;Parent=gene1653;Dbxref=Genbank:WP_002223436.1;Name=WP_002223436.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223436.1;transl_table=11 NC_014029.1 RefSeq gene 1810930 1811709 . + . ID=gene1654;Name=YPZ3_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08300;old_locus_tag=YPZ3_1393 NC_014029.1 Protein Homology CDS 1810930 1811709 . + 0 ID=cds1629;Parent=gene1654;Dbxref=Genbank:WP_002211876.1;Name=WP_002211876.1;gbkey=CDS;product=iron reductase;protein_id=WP_002211876.1;transl_table=11 NC_014029.1 RefSeq gene 1811861 1813408 . + . ID=gene1655;Name=YPZ3_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08305;old_locus_tag=YPZ3_1394 NC_014029.1 Protein Homology CDS 1811861 1813408 . + 0 ID=cds1630;Parent=gene1655;Dbxref=Genbank:WP_002211877.1;Name=WP_002211877.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_002211877.1;transl_table=11 NC_014029.1 RefSeq gene 1813443 1814741 . + . ID=gene1656;Name=YPZ3_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08310;old_locus_tag=YPZ3_1395 NC_014029.1 Protein Homology CDS 1813443 1814741 . + 0 ID=cds1631;Parent=gene1656;Dbxref=Genbank:WP_002211878.1;Name=WP_002211878.1;gbkey=CDS;product=lysine N6-hydroxylase/L-ornithine N5-oxygenase family;protein_id=WP_002211878.1;transl_table=11 NC_014029.1 RefSeq gene 1814741 1815319 . + . ID=gene1657;Name=YPZ3_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08315;old_locus_tag=YPZ3_1396 NC_014029.1 Protein Homology CDS 1814741 1815319 . + 0 ID=cds1632;Parent=gene1657;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11 NC_014029.1 RefSeq gene 1815316 1817160 . + . ID=gene1658;Name=YPZ3_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08320;old_locus_tag=YPZ3_1397 NC_014029.1 Protein Homology CDS 1815316 1817160 . + 0 ID=cds1633;Parent=gene1658;Dbxref=Genbank:WP_002215001.1;Name=WP_002215001.1;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=WP_002215001.1;transl_table=11 NC_014029.1 RefSeq gene 1817269 1818087 . - . ID=gene1659;Name=YPZ3_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08325;old_locus_tag=YPZ3_1398 NC_014029.1 Protein Homology CDS 1817269 1818087 . - 0 ID=cds1634;Parent=gene1659;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11 NC_014029.1 RefSeq gene 1818114 1819154 . - . ID=gene1660;Name=YPZ3_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08330;old_locus_tag=YPZ3_1399 NC_014029.1 Protein Homology CDS 1818114 1819154 . - 0 ID=cds1635;Parent=gene1660;Dbxref=Genbank:WP_002211880.1;Name=WP_002211880.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211880.1;transl_table=11 NC_014029.1 RefSeq gene 1819141 1820181 . - . ID=gene1661;Name=YPZ3_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08335;old_locus_tag=YPZ3_1400 NC_014029.1 Protein Homology CDS 1819141 1820181 . - 0 ID=cds1636;Parent=gene1661;Dbxref=Genbank:WP_002211881.1;Name=WP_002211881.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211881.1;transl_table=11 NC_014029.1 RefSeq gene 1820178 1821257 . - . ID=gene1662;Name=YPZ3_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08340;old_locus_tag=YPZ3_1401 NC_014029.1 Protein Homology CDS 1820178 1821257 . - 0 ID=cds1637;Parent=gene1662;Dbxref=Genbank:WP_002211882.1;Name=WP_002211882.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_002211882.1;transl_table=11 NC_014029.1 RefSeq gene 1821347 1823608 . - . ID=gene1663;Name=YPZ3_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08345;old_locus_tag=YPZ3_1402 NC_014029.1 Protein Homology CDS 1821347 1823608 . - 0 ID=cds1638;Parent=gene1663;Dbxref=Genbank:WP_002211883.1;Name=WP_002211883.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211883.1;transl_table=11 NC_014029.1 RefSeq gene 1823821 1825635 . - . ID=gene1664;Name=YPZ3_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08350;old_locus_tag=YPZ3_1403 NC_014029.1 Protein Homology CDS 1823821 1825635 . - 0 ID=cds1639;Parent=gene1664;Dbxref=Genbank:WP_002211884.1;Name=WP_002211884.1;gbkey=CDS;product=siderophore biosynthesis protein%2C IucA/IucC family;protein_id=WP_002211884.1;transl_table=11 NC_014029.1 RefSeq gene 1826581 1827471 . + . ID=gene1665;Name=YPZ3_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08355;old_locus_tag=YPZ3_1404 NC_014029.1 Protein Homology CDS 1826581 1827471 . + 0 ID=cds1640;Parent=gene1665;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11 NC_014029.1 RefSeq gene 1827555 1828448 . + . ID=gene1666;Name=YPZ3_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08360;old_locus_tag=YPZ3_1405 NC_014029.1 Protein Homology CDS 1827555 1828448 . + 0 ID=cds1641;Parent=gene1666;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11 NC_014029.1 RefSeq gene 1828834 1830243 . + . ID=gene1667;Name=YPZ3_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08365;old_locus_tag=YPZ3_1406 NC_014029.1 Protein Homology CDS 1828834 1830243 . + 0 ID=cds1642;Parent=gene1667;Dbxref=Genbank:WP_002211888.1;Name=WP_002211888.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11 NC_014029.1 RefSeq gene 1830443 1831057 . - . ID=gene1668;Name=YPZ3_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08370;old_locus_tag=YPZ3_1407 NC_014029.1 Protein Homology CDS 1830443 1831057 . - 0 ID=cds1643;Parent=gene1668;Dbxref=Genbank:WP_002211889.1;Name=WP_002211889.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisIE;protein_id=WP_002211889.1;transl_table=11 NC_014029.1 RefSeq gene 1831051 1831827 . - . ID=gene1669;Name=YPZ3_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08375;old_locus_tag=YPZ3_1408 NC_014029.1 Protein Homology CDS 1831051 1831827 . - 0 ID=cds1644;Parent=gene1669;Dbxref=Genbank:WP_002211890.1;Name=WP_002211890.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11 NC_014029.1 RefSeq gene 1831809 1832546 . - . ID=gene1670;Name=YPZ3_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08380;old_locus_tag=YPZ3_1409 NC_014029.1 Protein Homology CDS 1831809 1832546 . - 0 ID=cds1645;Parent=gene1670;Dbxref=Genbank:WP_002211891.1;Name=WP_002211891.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NC_014029.1 RefSeq gene 1832552 1833142 . - . ID=gene1671;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YPZ3_RS08385;old_locus_tag=YPZ3_1410 NC_014029.1 Protein Homology CDS 1832552 1833142 . - 0 ID=cds1646;Parent=gene1671;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NC_014029.1 RefSeq gene 1833142 1834209 . - . ID=gene1672;Name=YPZ3_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08390;old_locus_tag=YPZ3_1411 NC_014029.1 Protein Homology CDS 1833142 1834209 . - 0 ID=cds1647;Parent=gene1672;Dbxref=Genbank:WP_002211893.1;Name=WP_002211893.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisB;protein_id=WP_002211893.1;transl_table=11 NC_014029.1 RefSeq gene 1834206 1835354 . - . ID=gene1673;Name=YPZ3_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08395;old_locus_tag=YPZ3_1412 NC_014029.1 Protein Homology CDS 1834206 1835354 . - 0 ID=cds1648;Parent=gene1673;Dbxref=Genbank:WP_002211894.1;Name=WP_002211894.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_002211894.1;transl_table=11 NC_014029.1 RefSeq gene 1835357 1836688 . - . ID=gene1674;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YPZ3_RS08400;old_locus_tag=YPZ3_1413 NC_014029.1 Protein Homology CDS 1835357 1836688 . - 0 ID=cds1649;Parent=gene1674;Dbxref=Genbank:WP_002211895.1;Name=WP_002211895.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NC_014029.1 RefSeq gene 1836692 1837591 . - . ID=gene1675;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YPZ3_RS08405;old_locus_tag=YPZ3_1414 NC_014029.1 Protein Homology CDS 1836692 1837591 . - 0 ID=cds1650;Parent=gene1675;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NC_014029.1 RefSeq gene 1838297 1839124 . + . ID=gene1676;Name=YPZ3_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08410;old_locus_tag=YPZ3_1415 NC_014029.1 Protein Homology CDS 1838297 1839124 . + 0 ID=cds1651;Parent=gene1676;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11 NC_014029.1 RefSeq gene 1839279 1839713 . - . ID=gene1677;Name=YPZ3_RS08415;gbkey=Gene;gene_biotype=other;locus_tag=YPZ3_RS08415;old_locus_tag=YPZ3_1416 NC_014029.1 RefSeq repeat_region 1839622 1839728 . + . ID=id135;gbkey=repeat_region NC_014029.1 RefSeq gene 1839958 1840953 . - . ID=gene1678;Name=YPZ3_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08420;old_locus_tag=YPZ3_1417 NC_014029.1 Protein Homology CDS 1839958 1840953 . - 0 ID=cds1652;Parent=gene1678;Dbxref=Genbank:WP_002211900.1;Name=WP_002211900.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211900.1;transl_table=11 NC_014029.1 RefSeq gene 1840950 1841639 . - . ID=gene1679;Name=YPZ3_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08425;old_locus_tag=YPZ3_1418 NC_014029.1 Protein Homology CDS 1840950 1841639 . - 0 ID=cds1653;Parent=gene1679;Dbxref=Genbank:WP_002216310.1;Name=WP_002216310.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216310.1;transl_table=11 NC_014029.1 RefSeq gene 1841597 1842490 . - . ID=gene1680;Name=YPZ3_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08430;old_locus_tag=YPZ3_1419 NC_014029.1 Protein Homology CDS 1841597 1842490 . - 0 ID=cds1654;Parent=gene1680;Dbxref=Genbank:WP_002216311.1;Name=WP_002216311.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216311.1;transl_table=11 NC_014029.1 RefSeq gene 1842776 1843867 . + . ID=gene1681;Name=YPZ3_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08435;old_locus_tag=YPZ3_1420 NC_014029.1 Protein Homology CDS 1842776 1843867 . + 0 ID=cds1655;Parent=gene1681;Dbxref=Genbank:WP_002216312.1;Name=WP_002216312.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11 NC_014029.1 RefSeq gene 1844122 1844337 . + . ID=gene1682;Name=YPZ3_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08440 NC_014029.1 Protein Homology CDS 1844122 1844337 . + 0 ID=cds1656;Parent=gene1682;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NC_014029.1 RefSeq gene 1844327 1845718 . + . ID=gene1683;Name=YPZ3_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08445;old_locus_tag=YPZ3_1421 NC_014029.1 Protein Homology CDS 1844327 1845718 . + 0 ID=cds1657;Parent=gene1683;Dbxref=Genbank:WP_002211902.1;Name=WP_002211902.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_002211902.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1846213 1846420 . + . ID=id136;gbkey=repeat_region NC_014029.1 RefSeq gene 1846455 1847885 . - . ID=gene1684;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YPZ3_RS08450;old_locus_tag=YPZ3_1422 NC_014029.1 Protein Homology CDS 1846455 1847885 . - 0 ID=cds1658;Parent=gene1684;Dbxref=Genbank:WP_002211904.1;Name=WP_002211904.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_002211904.1;transl_table=11 NC_014029.1 RefSeq gene 1848178 1849287 . + . ID=gene1685;Name=YPZ3_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08455;old_locus_tag=YPZ3_1423 NC_014029.1 Protein Homology CDS 1848178 1849287 . + 0 ID=cds1659;Parent=gene1685;Dbxref=Genbank:WP_002211905.1;Name=WP_002211905.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_002211905.1;transl_table=11 NC_014029.1 RefSeq gene 1849721 1850038 . + . ID=gene1686;Name=YPZ3_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08460;old_locus_tag=YPZ3_1424 NC_014029.1 Protein Homology CDS 1849721 1850038 . + 0 ID=cds1660;Parent=gene1686;Dbxref=Genbank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217522.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1850336 1851655 . + . ID=id137;gbkey=repeat_region NC_014029.1 RefSeq gene 1850409 1851617 . + . ID=gene1687;Name=YPZ3_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08465;old_locus_tag=YPZ3_1425 NC_014029.1 Protein Homology CDS 1850409 1851617 . + 0 ID=cds1661;Parent=gene1687;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 1851580 1854732 . - . ID=gene1688;Name=YPZ3_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08470;old_locus_tag=YPZ3_1426 NC_014029.1 Protein Homology CDS 1851580 1854732 . - 0 ID=cds1662;Parent=gene1688;Dbxref=Genbank:WP_002216388.1;Name=WP_002216388.1;gbkey=CDS;product=adhesin;protein_id=WP_002216388.1;transl_table=11 NC_014029.1 RefSeq gene 1855757 1857061 . + . ID=gene1689;Name=YPZ3_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08475;old_locus_tag=YPZ3_1427 NC_014029.1 Protein Homology CDS 1855757 1857061 . + 0 ID=cds1663;Parent=gene1689;Dbxref=Genbank:WP_002211911.1;Name=WP_002211911.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211911.1;transl_table=11 NC_014029.1 RefSeq gene 1857070 1857492 . - . ID=gene1690;Name=YPZ3_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08480;old_locus_tag=YPZ3_1428 NC_014029.1 Protein Homology CDS 1857070 1857492 . - 0 ID=cds1664;Parent=gene1690;Dbxref=Genbank:WP_002211912.1;Name=WP_002211912.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_002211912.1;transl_table=11 NC_014029.1 RefSeq gene 1857920 1858660 . + . ID=gene1691;Name=YPZ3_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08485;old_locus_tag=YPZ3_1429 NC_014029.1 Protein Homology CDS 1857920 1858660 . + 0 ID=cds1665;Parent=gene1691;Dbxref=Genbank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216393.1;transl_table=11 NC_014029.1 RefSeq gene 1858708 1859550 . + . ID=gene1692;Name=YPZ3_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08490;old_locus_tag=YPZ3_1430 NC_014029.1 Protein Homology CDS 1858708 1859550 . + 0 ID=cds1666;Parent=gene1692;Dbxref=Genbank:WP_002211916.1;Name=WP_002211916.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211916.1;transl_table=11 NC_014029.1 RefSeq gene 1859582 1860859 . + . ID=gene1693;Name=YPZ3_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08495;old_locus_tag=YPZ3_1431 NC_014029.1 Protein Homology CDS 1859582 1860859 . + 0 ID=cds1667;Parent=gene1693;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NC_014029.1 RefSeq gene 1861156 1862301 . + . ID=gene1694;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YPZ3_RS08500;old_locus_tag=YPZ3_1432 NC_014029.1 Protein Homology CDS 1861156 1862301 . + 0 ID=cds1668;Parent=gene1694;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11 NC_014029.1 RefSeq gene 1862506 1863873 . - . ID=gene1695;Name=YPZ3_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08505;old_locus_tag=YPZ3_1433 NC_014029.1 Protein Homology CDS 1862506 1863873 . - 0 ID=cds1669;Parent=gene1695;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NC_014029.1 RefSeq gene 1864200 1865597 . + . ID=gene1696;Name=YPZ3_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08510;old_locus_tag=YPZ3_1434 NC_014029.1 Protein Homology CDS 1864200 1865597 . + 0 ID=cds1670;Parent=gene1696;Dbxref=Genbank:WP_002354070.1;Name=WP_002354070.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_002354070.1;transl_table=11 NC_014029.1 RefSeq gene 1865625 1866965 . - . ID=gene1697;Name=YPZ3_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08515;old_locus_tag=YPZ3_1435 NC_014029.1 Protein Homology CDS 1865625 1866965 . - 0 ID=cds1671;Parent=gene1697;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11 NC_014029.1 RefSeq gene 1867001 1867882 . - . ID=gene1698;Name=YPZ3_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08520;old_locus_tag=YPZ3_1436 NC_014029.1 Protein Homology CDS 1867001 1867882 . - 0 ID=cds1672;Parent=gene1698;Dbxref=Genbank:WP_002211923.1;Name=WP_002211923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211923.1;transl_table=11 NC_014029.1 RefSeq gene 1868459 1869154 . + . ID=gene1699;Name=YPZ3_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08525;old_locus_tag=YPZ3_1437 NC_014029.1 Protein Homology CDS 1868459 1869154 . + 0 ID=cds1673;Parent=gene1699;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NC_014029.1 RefSeq gene 1869244 1869783 . + . ID=gene1700;Name=YPZ3_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08530;old_locus_tag=YPZ3_1438 NC_014029.1 Protein Homology CDS 1869244 1869783 . + 0 ID=cds1674;Parent=gene1700;Dbxref=Genbank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211926.1;transl_table=11 NC_014029.1 RefSeq gene 1870129 1870204 . - . ID=gene1701;Name=YPZ3_RS08535;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS08535;old_locus_tag=YPZ3_t19 NC_014029.1 tRNAscan-SE tRNA 1870129 1870204 . - . ID=rna24;Parent=gene1701;anticodon=(pos:complement(1870169..1870171));gbkey=tRNA;product=tRNA-Asn NC_014029.1 tRNAscan-SE exon 1870129 1870204 . - . ID=id138;Parent=rna24;anticodon=(pos:complement(1870169..1870171));gbkey=tRNA;product=tRNA-Asn NC_014029.1 RefSeq gene 1870650 1871279 . - . ID=gene1702;Name=YPZ3_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08540;old_locus_tag=YPZ3_1439 NC_014029.1 Protein Homology CDS 1870650 1871279 . - 0 ID=cds1675;Parent=gene1702;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11 NC_014029.1 RefSeq gene 1871537 1872829 . - . ID=gene1703;Name=YPZ3_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08545;old_locus_tag=YPZ3_1440 NC_014029.1 Protein Homology CDS 1871537 1872829 . - 0 ID=cds1676;Parent=gene1703;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11 NC_014029.1 RefSeq gene 1872849 1873355 . - . ID=gene1704;Name=YPZ3_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08550;old_locus_tag=YPZ3_1441 NC_014029.1 Protein Homology CDS 1872849 1873355 . - 0 ID=cds1677;Parent=gene1704;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11 NC_014029.1 RefSeq gene 1873479 1874471 . - . ID=gene1705;Name=YPZ3_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08555;old_locus_tag=YPZ3_1442 NC_014029.1 Protein Homology CDS 1873479 1874471 . - 0 ID=cds1678;Parent=gene1705;Dbxref=Genbank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213121.1;transl_table=11 NC_014029.1 RefSeq gene 1874994 1875734 . + . ID=gene1706;Name=YPZ3_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08560;old_locus_tag=YPZ3_1443 NC_014029.1 Protein Homology CDS 1874994 1875734 . + 0 ID=cds1679;Parent=gene1706;Dbxref=Genbank:WP_002213120.1;Name=WP_002213120.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_002213120.1;transl_table=11 NC_014029.1 RefSeq gene 1875940 1876104 . - . ID=gene1707;Name=YPZ3_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08565 NC_014029.1 Protein Homology CDS 1875940 1876104 . - 0 ID=cds1680;Parent=gene1707;Dbxref=Genbank:WP_002216586.1;Name=WP_002216586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216586.1;transl_table=11 NC_014029.1 RefSeq gene 1876121 1878247 . - . ID=gene1708;Name=YPZ3_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08570;old_locus_tag=YPZ3_1444 NC_014029.1 Protein Homology CDS 1876121 1878247 . - 0 ID=cds1681;Parent=gene1708;Dbxref=Genbank:WP_002213113.1;Name=WP_002213113.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_002213113.1;transl_table=11 NC_014029.1 RefSeq gene 1878325 1879602 . - . ID=gene1709;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=YPZ3_RS08575;old_locus_tag=YPZ3_1445 NC_014029.1 Protein Homology CDS 1878325 1879602 . - 0 ID=cds1682;Parent=gene1709;Dbxref=Genbank:WP_042468818.1;Name=WP_042468818.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_042468818.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1879549 1880872 . + . ID=id139;gbkey=repeat_region;gene=lacY NC_014029.1 RefSeq gene 1879627 1880835 . + . ID=gene1710;Name=YPZ3_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08580;old_locus_tag=YPZ3_1446 NC_014029.1 Protein Homology CDS 1879627 1880835 . + 0 ID=cds1683;Parent=gene1710;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 1881086 1881751 . - . ID=gene1711;Name=YPZ3_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08585;old_locus_tag=YPZ3_1447 NC_014029.1 Protein Homology CDS 1881086 1881751 . - 0 ID=cds1684;Parent=gene1711;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11 NC_014029.1 RefSeq gene 1882162 1882716 . + . ID=gene1712;Name=YPZ3_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08590;old_locus_tag=YPZ3_1448 NC_014029.1 Protein Homology CDS 1882162 1882716 . + 0 ID=cds1685;Parent=gene1712;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11 NC_014029.1 RefSeq gene 1882845 1883720 . - . ID=gene1713;Name=YPZ3_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08595;old_locus_tag=YPZ3_1449 NC_014029.1 Protein Homology CDS 1882845 1883720 . - 0 ID=cds1686;Parent=gene1713;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11 NC_014029.1 RefSeq gene 1883745 1883957 . - . ID=gene1714;Name=YPZ3_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08600 NC_014029.1 Protein Homology CDS 1883745 1883957 . - 0 ID=cds1687;Parent=gene1714;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11 NC_014029.1 RefSeq gene 1884025 1884918 . - . ID=gene1715;Name=YPZ3_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08605;old_locus_tag=YPZ3_1450 NC_014029.1 Protein Homology CDS 1884025 1884918 . - 0 ID=cds1688;Parent=gene1715;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11 NC_014029.1 RefSeq gene 1884915 1885799 . - . ID=gene1716;Name=YPZ3_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08610;old_locus_tag=YPZ3_1451 NC_014029.1 Protein Homology CDS 1884915 1885799 . - 0 ID=cds1689;Parent=gene1716;Dbxref=Genbank:WP_002211844.1;Name=WP_002211844.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeC;protein_id=WP_002211844.1;transl_table=11 NC_014029.1 RefSeq gene 1885799 1886689 . - . ID=gene1717;Name=YPZ3_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08615;old_locus_tag=YPZ3_1452 NC_014029.1 Protein Homology CDS 1885799 1886689 . - 0 ID=cds1690;Parent=gene1717;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11 NC_014029.1 RefSeq gene 1886686 1887654 . - . ID=gene1718;Name=YPZ3_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08620;old_locus_tag=YPZ3_1453 NC_014029.1 Protein Homology CDS 1886686 1887654 . - 0 ID=cds1691;Parent=gene1718;Dbxref=Genbank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_002211842.1;transl_table=11 NC_014029.1 RefSeq gene 1887866 1888528 . + . ID=gene1719;Name=YPZ3_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08625;old_locus_tag=YPZ3_1454 NC_014029.1 Protein Homology CDS 1887866 1888528 . + 0 ID=cds1692;Parent=gene1719;Dbxref=Genbank:WP_002216686.1;Name=WP_002216686.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_002216686.1;transl_table=11 NC_014029.1 RefSeq gene 1888650 1889333 . - . ID=gene1720;Name=YPZ3_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08630;old_locus_tag=YPZ3_1455 NC_014029.1 Protein Homology CDS 1888650 1889333 . - 0 ID=cds1693;Parent=gene1720;Dbxref=Genbank:WP_002211840.1;Name=WP_002211840.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211840.1;transl_table=11 NC_014029.1 RefSeq gene 1889652 1889903 . + . ID=gene1721;Name=YPZ3_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08635 NC_014029.1 Protein Homology CDS 1889652 1889903 . + 0 ID=cds1694;Parent=gene1721;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NC_014029.1 RefSeq gene 1889975 1890352 . - . ID=gene1722;Name=YPZ3_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08640 NC_014029.1 Protein Homology CDS 1889975 1890352 . - 0 ID=cds1695;Parent=gene1722;Dbxref=Genbank:WP_002216692.1;Name=WP_002216692.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216692.1;transl_table=11 NC_014029.1 RefSeq gene 1890662 1890874 . - . ID=gene1723;Name=YPZ3_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08645 NC_014029.1 Protein Homology CDS 1890662 1890874 . - 0 ID=cds1696;Parent=gene1723;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11 NC_014029.1 RefSeq gene 1891265 1893193 . + . ID=gene1724;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YPZ3_RS08650;old_locus_tag=YPZ3_1456 NC_014029.1 Protein Homology CDS 1891265 1893193 . + 0 ID=cds1697;Parent=gene1724;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NC_014029.1 RefSeq gene 1893398 1893748 . + . ID=gene1725;Name=YPZ3_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08655;old_locus_tag=YPZ3_1457 NC_014029.1 Protein Homology CDS 1893398 1893748 . + 0 ID=cds1698;Parent=gene1725;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11 NC_014029.1 RefSeq gene 1893845 1894042 . + . ID=gene1726;Name=YPZ3_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08660 NC_014029.1 Protein Homology CDS 1893845 1894042 . + 0 ID=cds1699;Parent=gene1726;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NC_014029.1 RefSeq gene 1894080 1894436 . + . ID=gene1727;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YPZ3_RS08665;old_locus_tag=YPZ3_1458 NC_014029.1 Protein Homology CDS 1894080 1894436 . + 0 ID=cds1700;Parent=gene1727;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NC_014029.1 RefSeq gene 1894935 1895918 . + . ID=gene1728;Name=YPZ3_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08670;old_locus_tag=YPZ3_1459 NC_014029.1 Protein Homology CDS 1894935 1895918 . + 0 ID=cds1701;Parent=gene1728;Dbxref=Genbank:WP_002211832.1;Name=WP_002211832.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002211832.1;transl_table=11 NC_014029.1 RefSeq gene 1895932 1898319 . + . ID=gene1729;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YPZ3_RS08675;old_locus_tag=YPZ3_1460 NC_014029.1 Protein Homology CDS 1895932 1898319 . + 0 ID=cds1702;Parent=gene1729;Dbxref=Genbank:WP_002211831.1;Name=WP_002211831.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002211831.1;transl_table=11 NC_014029.1 RefSeq gene 1898324 1898620 . + . ID=gene1730;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YPZ3_RS08680 NC_014029.1 Protein Homology CDS 1898324 1898620 . + 0 ID=cds1703;Parent=gene1730;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NC_014029.1 RefSeq gene 1898954 1899412 . + . ID=gene1731;Name=YPZ3_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08685;old_locus_tag=YPZ3_1461 NC_014029.1 Protein Homology CDS 1898954 1899412 . + 0 ID=cds1704;Parent=gene1731;Dbxref=Genbank:WP_002211829.1;Name=WP_002211829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211829.1;transl_table=11 NC_014029.1 RefSeq gene 1899639 1900646 . + . ID=gene1732;Name=YPZ3_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08690;old_locus_tag=YPZ3_1462 NC_014029.1 Protein Homology CDS 1899639 1900646 . + 0 ID=cds1705;Parent=gene1732;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11 NC_014029.1 RefSeq gene 1900716 1901270 . + . ID=gene1733;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YPZ3_RS08695;old_locus_tag=YPZ3_1463 NC_014029.1 Protein Homology CDS 1900716 1901270 . + 0 ID=cds1706;Parent=gene1733;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NC_014029.1 RefSeq gene 1901295 1902053 . + . ID=gene1734;Name=YPZ3_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08700;old_locus_tag=YPZ3_1464 NC_014029.1 Protein Homology CDS 1901295 1902053 . + 0 ID=cds1707;Parent=gene1734;Dbxref=Genbank:WP_002211826.1;Name=WP_002211826.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_002211826.1;transl_table=11 NC_014029.1 RefSeq gene 1902403 1903557 . + . ID=gene1735;Name=YPZ3_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08705;old_locus_tag=YPZ3_1465 NC_014029.1 Protein Homology CDS 1902403 1903557 . + 0 ID=cds1708;Parent=gene1735;Dbxref=Genbank:WP_002211825.1;Name=WP_002211825.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_002211825.1;transl_table=11 NC_014029.1 RefSeq gene 1903544 1904527 . + . ID=gene1736;Name=YPZ3_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08710;old_locus_tag=YPZ3_1466 NC_014029.1 Protein Homology CDS 1903544 1904527 . + 0 ID=cds1709;Parent=gene1736;Dbxref=Genbank:WP_002211824.1;Name=WP_002211824.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002211824.1;transl_table=11 NC_014029.1 RefSeq gene 1904524 1906527 . + . ID=gene1737;Name=YPZ3_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08715;old_locus_tag=YPZ3_1467 NC_014029.1 Protein Homology CDS 1904524 1906527 . + 0 ID=cds1710;Parent=gene1737;Dbxref=Genbank:WP_002211823.1;Name=WP_002211823.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_002211823.1;transl_table=11 NC_014029.1 RefSeq gene 1906524 1907429 . + . ID=gene1738;Name=YPZ3_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08720;old_locus_tag=YPZ3_1468 NC_014029.1 Protein Homology CDS 1906524 1907429 . + 0 ID=cds1711;Parent=gene1738;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11 NC_014029.1 RefSeq gene 1907426 1909090 . + . ID=gene1739;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YPZ3_RS08725;old_locus_tag=YPZ3_1469 NC_014029.1 Protein Homology CDS 1907426 1909090 . + 0 ID=cds1712;Parent=gene1739;Dbxref=Genbank:WP_002211821.1;Name=WP_002211821.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_002211821.1;transl_table=11 NC_014029.1 RefSeq gene 1909087 1909431 . + . ID=gene1740;Name=YPZ3_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08730;old_locus_tag=YPZ3_1470 NC_014029.1 Protein Homology CDS 1909087 1909431 . + 0 ID=cds1713;Parent=gene1740;Dbxref=Genbank:WP_002211820.1;Name=WP_002211820.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002211820.1;transl_table=11 NC_014029.1 RefSeq gene 1909428 1909814 . + . ID=gene1741;Name=YPZ3_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08735;old_locus_tag=YPZ3_1471 NC_014029.1 Protein Homology CDS 1909428 1909814 . + 0 ID=cds1714;Parent=gene1741;Dbxref=Genbank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11 NC_014029.1 RefSeq gene 1910094 1910558 . + . ID=gene1742;Name=YPZ3_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08740;old_locus_tag=YPZ3_1472 NC_014029.1 Protein Homology CDS 1910094 1910558 . + 0 ID=cds1715;Parent=gene1742;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11 NC_014029.1 RefSeq gene 1910683 1911699 . + . ID=gene1743;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YPZ3_RS08745;old_locus_tag=YPZ3_1473 NC_014029.1 Protein Homology CDS 1910683 1911699 . + 0 ID=cds1716;Parent=gene1743;Dbxref=Genbank:WP_002211816.1;Name=WP_002211816.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_002211816.1;transl_table=11 NC_014029.1 RefSeq gene 1911751 1913214 . + . ID=gene1744;Name=YPZ3_RS08750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS08750;pseudo=true NC_014029.1 Protein Homology CDS 1911751 1913214 . + 0 ID=cds1717;Parent=gene1744;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1912471..1912473%2Caa:Other);transl_table=11 NC_014029.1 RefSeq gene 1913383 1914429 . - . ID=gene1745;Name=YPZ3_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08755;old_locus_tag=YPZ3_1476 NC_014029.1 Protein Homology CDS 1913383 1914429 . - 0 ID=cds1718;Parent=gene1745;Dbxref=Genbank:WP_002211815.1;Name=WP_002211815.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002211815.1;transl_table=11 NC_014029.1 RefSeq gene 1914586 1915407 . - . ID=gene1746;Name=YPZ3_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08760;old_locus_tag=YPZ3_1477 NC_014029.1 Protein Homology CDS 1914586 1915407 . - 0 ID=cds1719;Parent=gene1746;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11 NC_014029.1 RefSeq gene 1915744 1918128 . + . ID=gene1747;Name=YPZ3_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08765;old_locus_tag=YPZ3_1478 NC_014029.1 Protein Homology CDS 1915744 1918128 . + 0 ID=cds1720;Parent=gene1747;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NC_014029.1 RefSeq gene 1918727 1919830 . - . ID=gene1748;Name=YPZ3_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08770;old_locus_tag=YPZ3_1479 NC_014029.1 Protein Homology CDS 1918727 1919830 . - 0 ID=cds1721;Parent=gene1748;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11 NC_014029.1 RefSeq gene 1920451 1923507 . + . ID=gene1749;Name=YPZ3_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08775;old_locus_tag=YPZ3_1480 NC_014029.1 Protein Homology CDS 1920451 1923507 . + 0 ID=cds1722;Parent=gene1749;Dbxref=Genbank:WP_002211811.1;Name=WP_002211811.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211811.1;transl_table=11 NC_014029.1 RefSeq gene 1923629 1924045 . + . ID=gene1750;Name=YPZ3_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08780;old_locus_tag=YPZ3_1481 NC_014029.1 Protein Homology CDS 1923629 1924045 . + 0 ID=cds1723;Parent=gene1750;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11 NC_014029.1 RefSeq gene 1924304 1924462 . + . ID=gene1751;Name=YPZ3_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08785 NC_014029.1 Protein Homology CDS 1924304 1924462 . + 0 ID=cds1724;Parent=gene1751;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11 NC_014029.1 RefSeq gene 1924640 1925011 . + . ID=gene1752;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YPZ3_RS08790;old_locus_tag=YPZ3_1482 NC_014029.1 Protein Homology CDS 1924640 1925011 . + 0 ID=cds1725;Parent=gene1752;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11 NC_014029.1 RefSeq gene 1925026 1926537 . + . ID=gene1753;Name=YPZ3_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08795;old_locus_tag=YPZ3_1483 NC_014029.1 Protein Homology CDS 1925026 1926537 . + 0 ID=cds1726;Parent=gene1753;Dbxref=Genbank:WP_002211808.1;Name=WP_002211808.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=Fe-S cluster assembly protein SufB;protein_id=WP_002211808.1;transl_table=11 NC_014029.1 RefSeq gene 1926723 1927469 . + . ID=gene1754;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YPZ3_RS08800;old_locus_tag=YPZ3_1484 NC_014029.1 Protein Homology CDS 1926723 1927469 . + 0 ID=cds1727;Parent=gene1754;Dbxref=Genbank:WP_002211807.1;Name=WP_002211807.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002211807.1;transl_table=11 NC_014029.1 RefSeq gene 1927444 1928769 . + . ID=gene1755;Name=YPZ3_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08805;old_locus_tag=YPZ3_1485 NC_014029.1 Protein Homology CDS 1927444 1928769 . + 0 ID=cds1728;Parent=gene1755;Dbxref=Genbank:WP_002211806.1;Name=WP_002211806.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_002211806.1;transl_table=11 NC_014029.1 RefSeq gene 1928766 1929986 . + . ID=gene1756;Name=YPZ3_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08810;old_locus_tag=YPZ3_1486 NC_014029.1 Protein Homology CDS 1928766 1929986 . + 0 ID=cds1729;Parent=gene1756;Dbxref=Genbank:WP_002211805.1;Name=WP_002211805.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002211805.1;transl_table=11 NC_014029.1 RefSeq gene 1930075 1930497 . + . ID=gene1757;Name=YPZ3_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08815;old_locus_tag=YPZ3_1487 NC_014029.1 Protein Homology CDS 1930075 1930497 . + 0 ID=cds1730;Parent=gene1757;Dbxref=Genbank:WP_002211804.1;Name=WP_002211804.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NC_014029.1 RefSeq gene 1930768 1931787 . + . ID=gene1758;Name=YPZ3_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08820;old_locus_tag=YPZ3_1488 NC_014029.1 Protein Homology CDS 1930768 1931787 . + 0 ID=cds1731;Parent=gene1758;Dbxref=Genbank:WP_002211803.1;Name=WP_002211803.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002211803.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1931761 1933725 . + . ID=id140;gbkey=repeat_region NC_014029.1 RefSeq gene 1931831 1932610 . - . ID=gene1759;Name=YPZ3_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08825;old_locus_tag=YPZ3_1489 NC_014029.1 Protein Homology CDS 1931831 1932610 . - 0 ID=cds1732;Parent=gene1759;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 1932610 1933632 . - . ID=gene1760;Name=YPZ3_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08830;old_locus_tag=YPZ3_1490 NC_014029.1 Protein Homology CDS 1932610 1933632 . - 0 ID=cds1733;Parent=gene1760;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1934102 1934824 . + . ID=id141;gbkey=repeat_region NC_014029.1 RefSeq gene 1934214 1934672 . - . ID=gene1761;Name=YPZ3_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08835;old_locus_tag=YPZ3_1491 NC_014029.1 Protein Homology CDS 1934214 1934672 . - 0 ID=cds1734;Parent=gene1761;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1934662 1934832 . - . ID=gene1762;Name=YPZ3_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08840 NC_014029.1 Protein Homology CDS 1934662 1934832 . - 0 ID=cds1735;Parent=gene1762;Dbxref=Genbank:WP_002430115.1;Name=WP_002430115.1;gbkey=CDS;product=invasin;protein_id=WP_002430115.1;transl_table=11 NC_014029.1 RefSeq gene 1934863 1935099 . - . ID=gene1763;Name=YPZ3_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08845 NC_014029.1 Protein Homology CDS 1934863 1935099 . - 0 ID=cds1736;Parent=gene1763;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11 NC_014029.1 RefSeq gene 1935420 1936832 . - . ID=gene1764;Name=YPZ3_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08850;old_locus_tag=YPZ3_1492 NC_014029.1 Protein Homology CDS 1935420 1936832 . - 0 ID=cds1737;Parent=gene1764;Dbxref=Genbank:WP_002210936.1;Name=WP_002210936.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002210936.1;transl_table=11 NC_014029.1 RefSeq gene 1937408 1937484 . - . ID=gene1765;Name=YPZ3_RS08855;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS08855;old_locus_tag=YPZ3_t20 NC_014029.1 tRNAscan-SE tRNA 1937408 1937484 . - . ID=rna25;Parent=gene1765;anticodon=(pos:complement(1937448..1937450));gbkey=tRNA;product=tRNA-Val NC_014029.1 tRNAscan-SE exon 1937408 1937484 . - . ID=id142;Parent=rna25;anticodon=(pos:complement(1937448..1937450));gbkey=tRNA;product=tRNA-Val NC_014029.1 RefSeq gene 1937544 1937620 . - . ID=gene1766;Name=YPZ3_RS08860;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS08860;old_locus_tag=YPZ3_t21 NC_014029.1 tRNAscan-SE tRNA 1937544 1937620 . - . ID=rna26;Parent=gene1766;anticodon=(pos:complement(1937584..1937586));gbkey=tRNA;product=tRNA-Val NC_014029.1 tRNAscan-SE exon 1937544 1937620 . - . ID=id143;Parent=rna26;anticodon=(pos:complement(1937584..1937586));gbkey=tRNA;product=tRNA-Val NC_014029.1 RefSeq gene 1937863 1939236 . - . ID=gene1767;Name=YPZ3_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08865;old_locus_tag=YPZ3_1493 NC_014029.1 Protein Homology CDS 1937863 1939236 . - 0 ID=cds1738;Parent=gene1767;Dbxref=Genbank:WP_002210937.1;Name=WP_002210937.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_002210937.1;transl_table=11 NC_014029.1 RefSeq gene 1939485 1940141 . + . ID=gene1768;Name=YPZ3_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08870;old_locus_tag=YPZ3_1494 NC_014029.1 Protein Homology CDS 1939485 1940141 . + 0 ID=cds1739;Parent=gene1768;Dbxref=Genbank:WP_002210939.1;Name=WP_002210939.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_002210939.1;transl_table=11 NC_014029.1 RefSeq gene 1940192 1941343 . - . ID=gene1769;Name=YPZ3_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08875;old_locus_tag=YPZ3_1495 NC_014029.1 Protein Homology CDS 1940192 1941343 . - 0 ID=cds1740;Parent=gene1769;Dbxref=Genbank:WP_002210940.1;Name=WP_002210940.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11 NC_014029.1 RefSeq gene 1941823 1943025 . - . ID=gene1770;Name=YPZ3_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08880;old_locus_tag=YPZ3_1496 NC_014029.1 Protein Homology CDS 1941823 1943025 . - 0 ID=cds1741;Parent=gene1770;Dbxref=Genbank:WP_002210941.1;Name=WP_002210941.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002210941.1;transl_table=11 NC_014029.1 RefSeq gene 1943315 1944247 . + . ID=gene1771;Name=YPZ3_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08885;old_locus_tag=YPZ3_1497 NC_014029.1 Protein Homology CDS 1943315 1944247 . + 0 ID=cds1742;Parent=gene1771;Dbxref=Genbank:WP_002210942.1;Name=WP_002210942.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210942.1;transl_table=11 NC_014029.1 RefSeq gene 1944336 1945361 . - . ID=gene1772;Name=YPZ3_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08890;old_locus_tag=YPZ3_1498 NC_014029.1 Protein Homology CDS 1944336 1945361 . - 0 ID=cds1743;Parent=gene1772;Dbxref=Genbank:WP_002210943.1;Name=WP_002210943.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_002210943.1;transl_table=11 NC_014029.1 RefSeq gene 1945888 1946466 . - . ID=gene1773;Name=YPZ3_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08895;old_locus_tag=YPZ3_1499 NC_014029.1 Protein Homology CDS 1945888 1946466 . - 0 ID=cds1744;Parent=gene1773;Dbxref=Genbank:WP_002210944.1;Name=WP_002210944.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002210944.1;transl_table=11 NC_014029.1 RefSeq gene 1946844 1947695 . - . ID=gene1774;Name=YPZ3_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08900;old_locus_tag=YPZ3_1500 NC_014029.1 Protein Homology CDS 1946844 1947695 . - 0 ID=cds1745;Parent=gene1774;Dbxref=Genbank:WP_002210945.1;Name=WP_002210945.1;gbkey=CDS;product=hydrolase;protein_id=WP_002210945.1;transl_table=11 NC_014029.1 RefSeq gene 1947814 1948035 . + . ID=gene1775;Name=YPZ3_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08905 NC_014029.1 Protein Homology CDS 1947814 1948035 . + 0 ID=cds1746;Parent=gene1775;Dbxref=Genbank:WP_002216283.1;Name=WP_002216283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216283.1;transl_table=11 NC_014029.1 RefSeq gene 1948135 1948485 . + . ID=gene1776;Name=YPZ3_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08910;old_locus_tag=YPZ3_1501 NC_014029.1 Protein Homology CDS 1948135 1948485 . + 0 ID=cds1747;Parent=gene1776;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1948583 1948757 . + . ID=id144;gbkey=repeat_region NC_014029.1 RefSeq gene 1948794 1949474 . - . ID=gene1777;Name=YPZ3_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08915;old_locus_tag=YPZ3_1502 NC_014029.1 Protein Homology CDS 1948794 1949474 . - 0 ID=cds1748;Parent=gene1777;Dbxref=Genbank:WP_002210947.1;Name=WP_002210947.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_002210947.1;transl_table=11 NC_014029.1 RefSeq gene 1949553 1949960 . - . ID=gene1778;Name=YPZ3_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08920;old_locus_tag=YPZ3_1503 NC_014029.1 Protein Homology CDS 1949553 1949960 . - 0 ID=cds1749;Parent=gene1778;Dbxref=Genbank:WP_002210948.1;Name=WP_002210948.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=lactoylglutathione lyase;protein_id=WP_002210948.1;transl_table=11 NC_014029.1 RefSeq gene 1950233 1953187 . + . ID=gene1779;Name=YPZ3_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08925;old_locus_tag=YPZ3_1504 NC_014029.1 Protein Homology CDS 1950233 1953187 . + 0 ID=cds1750;Parent=gene1779;Dbxref=Genbank:WP_002210949.1;Name=WP_002210949.1;gbkey=CDS;product=toxin;protein_id=WP_002210949.1;transl_table=11 NC_014029.1 RefSeq gene 1953408 1954505 . - . ID=gene1780;Name=YPZ3_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08930;old_locus_tag=YPZ3_1505 NC_014029.1 Protein Homology CDS 1953408 1954505 . - 0 ID=cds1751;Parent=gene1780;Dbxref=Genbank:WP_002210950.1;Name=WP_002210950.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_002210950.1;transl_table=11 NC_014029.1 RefSeq gene 1954593 1955192 . - . ID=gene1781;Name=YPZ3_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08935;old_locus_tag=YPZ3_1506 NC_014029.1 Protein Homology CDS 1954593 1955192 . - 0 ID=cds1752;Parent=gene1781;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NC_014029.1 RefSeq gene 1955415 1957052 . - . ID=gene1782;Name=YPZ3_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08940;old_locus_tag=YPZ3_1507 NC_014029.1 Protein Homology CDS 1955415 1957052 . - 0 ID=cds1753;Parent=gene1782;Dbxref=Genbank:WP_002210952.1;Name=WP_002210952.1;gbkey=CDS;product=metal dependent hydrolase;protein_id=WP_002210952.1;transl_table=11 NC_014029.1 RefSeq gene 1957226 1957465 . + . ID=gene1783;Name=YPZ3_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08945 NC_014029.1 Protein Homology CDS 1957226 1957465 . + 0 ID=cds1754;Parent=gene1783;Dbxref=Genbank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210953.1;transl_table=11 NC_014029.1 RefSeq gene 1957597 1958493 . + . ID=gene1784;Name=YPZ3_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08950;old_locus_tag=YPZ3_1508 NC_014029.1 Protein Homology CDS 1957597 1958493 . + 0 ID=cds1755;Parent=gene1784;Dbxref=Genbank:WP_002210954.1;Name=WP_002210954.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210954.1;transl_table=11 NC_014029.1 RefSeq gene 1959291 1959722 . + . ID=gene1785;Name=YPZ3_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08955;old_locus_tag=YPZ3_1509 NC_014029.1 Protein Homology CDS 1959291 1959722 . + 0 ID=cds1756;Parent=gene1785;Dbxref=Genbank:WP_002210955.1;Name=WP_002210955.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_002210955.1;transl_table=11 NC_014029.1 RefSeq gene 1959866 1960333 . - . ID=gene1786;Name=YPZ3_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08960;old_locus_tag=YPZ3_1510 NC_014029.1 Protein Homology CDS 1959866 1960333 . - 0 ID=cds1757;Parent=gene1786;Dbxref=Genbank:WP_002210956.1;Name=WP_002210956.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210956.1;transl_table=11 NC_014029.1 RefSeq gene 1960889 1962001 . + . ID=gene1787;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=YPZ3_RS08965;old_locus_tag=YPZ3_1511 NC_014029.1 Protein Homology CDS 1960889 1962001 . + 0 ID=cds1758;Parent=gene1787;Dbxref=Genbank:WP_002218322.1;Name=WP_002218322.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NC_014029.1 RefSeq gene 1962059 1962373 . + . ID=gene1788;Name=YPZ3_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08970;old_locus_tag=YPZ3_1512 NC_014029.1 Protein Homology CDS 1962059 1962373 . + 0 ID=cds1759;Parent=gene1788;Dbxref=Genbank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002218323.1;transl_table=11 NC_014029.1 RefSeq gene 1962464 1963117 . + . ID=gene1789;Name=YPZ3_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08975;old_locus_tag=YPZ3_1513 NC_014029.1 Protein Homology CDS 1962464 1963117 . + 0 ID=cds1760;Parent=gene1789;Dbxref=Genbank:WP_002210959.1;Name=WP_002210959.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NC_014029.1 RefSeq gene 1963299 1964573 . + . ID=gene1790;Name=YPZ3_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08980;old_locus_tag=YPZ3_1514 NC_014029.1 Protein Homology CDS 1963299 1964573 . + 0 ID=cds1761;Parent=gene1790;Dbxref=Genbank:WP_002210960.1;Name=WP_002210960.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_002210960.1;transl_table=11 NC_014029.1 RefSeq gene 1964728 1965588 . + . ID=gene1791;Name=YPZ3_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08985;old_locus_tag=YPZ3_1515 NC_014029.1 Protein Homology CDS 1964728 1965588 . + 0 ID=cds1762;Parent=gene1791;Dbxref=Genbank:WP_002210961.1;Name=WP_002210961.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_002210961.1;transl_table=11 NC_014029.1 RefSeq gene 1965648 1966253 . - . ID=gene1792;Name=YPZ3_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08990;old_locus_tag=YPZ3_1516 NC_014029.1 Protein Homology CDS 1965648 1966253 . - 0 ID=cds1763;Parent=gene1792;Dbxref=Genbank:WP_002210962.1;Name=WP_002210962.1;gbkey=CDS;product=glutathionine S-transferase;protein_id=WP_002210962.1;transl_table=11 NC_014029.1 RefSeq gene 1966498 1966761 . - . ID=gene1793;Name=YPZ3_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS08995 NC_014029.1 Protein Homology CDS 1966498 1966761 . - 0 ID=cds1764;Parent=gene1793;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11 NC_014029.1 RefSeq gene 1967007 1967597 . - . ID=gene1794;Name=YPZ3_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09000;old_locus_tag=YPZ3_1517 NC_014029.1 Protein Homology CDS 1967007 1967597 . - 0 ID=cds1765;Parent=gene1794;Dbxref=Genbank:WP_002210965.1;Name=WP_002210965.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210965.1;transl_table=11 NC_014029.1 RefSeq gene 1967852 1969357 . - . ID=gene1795;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=YPZ3_RS09005;old_locus_tag=YPZ3_1518 NC_014029.1 Protein Homology CDS 1967852 1969357 . - 0 ID=cds1766;Parent=gene1795;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11 NC_014029.1 RefSeq gene 1970000 1971280 . - . ID=gene1796;Name=YPZ3_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09010;old_locus_tag=YPZ3_1519 NC_014029.1 Protein Homology CDS 1970000 1971280 . - 0 ID=cds1767;Parent=gene1796;Dbxref=Genbank:WP_002210967.1;Name=WP_002210967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210967.1;transl_table=11 NC_014029.1 RefSeq gene 1971670 1972485 . - . ID=gene1797;Name=YPZ3_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09015;old_locus_tag=YPZ3_1520 NC_014029.1 Protein Homology CDS 1971670 1972485 . - 0 ID=cds1768;Parent=gene1797;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11 NC_014029.1 RefSeq gene 1972485 1973477 . - . ID=gene1798;Name=YPZ3_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09020;old_locus_tag=YPZ3_1521 NC_014029.1 Protein Homology CDS 1972485 1973477 . - 0 ID=cds1769;Parent=gene1798;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11 NC_014029.1 RefSeq gene 1973477 1974367 . - . ID=gene1799;Name=YPZ3_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09025;old_locus_tag=YPZ3_1522 NC_014029.1 Protein Homology CDS 1973477 1974367 . - 0 ID=cds1770;Parent=gene1799;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11 NC_014029.1 RefSeq gene 1974354 1975319 . - . ID=gene1800;Name=YPZ3_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09030;old_locus_tag=YPZ3_1523 NC_014029.1 Protein Homology CDS 1974354 1975319 . - 0 ID=cds1771;Parent=gene1800;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11 NC_014029.1 RefSeq gene 1975316 1976962 . - . ID=gene1801;Name=YPZ3_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09035;old_locus_tag=YPZ3_1524 NC_014029.1 Protein Homology CDS 1975316 1976962 . - 0 ID=cds1772;Parent=gene1801;Dbxref=Genbank:WP_002210973.1;Name=WP_002210973.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210973.1;transl_table=11 NC_014029.1 RefSeq gene 1977098 1977276 . - . ID=gene1802;Name=YPZ3_RS09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS09040;pseudo=true NC_014029.1 Protein Homology CDS 1977098 1977276 . - 0 ID=cds1773;Parent=gene1802;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 1977463 1977630 . + . ID=gene1803;Name=YPZ3_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09045 NC_014029.1 Protein Homology CDS 1977463 1977630 . + 0 ID=cds1774;Parent=gene1803;Dbxref=Genbank:WP_002430114.1;Name=WP_002430114.1;gbkey=CDS;product=invasin;protein_id=WP_002430114.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1977466 1978189 . + . ID=id145;gbkey=repeat_region NC_014029.1 RefSeq gene 1977620 1978078 . + . ID=gene1804;Name=YPZ3_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09050;old_locus_tag=YPZ3_1525 NC_014029.1 Protein Homology CDS 1977620 1978078 . + 0 ID=cds1775;Parent=gene1804;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 1978243 1979271 . - . ID=gene1805;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YPZ3_RS09055;old_locus_tag=YPZ3_1526 NC_014029.1 Protein Homology CDS 1978243 1979271 . - 0 ID=cds1776;Parent=gene1805;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11 NC_014029.1 RefSeq gene 1979516 1980181 . + . ID=gene1806;Name=YPZ3_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09060;old_locus_tag=YPZ3_1527 NC_014029.1 Protein Homology CDS 1979516 1980181 . + 0 ID=cds1777;Parent=gene1806;Dbxref=Genbank:WP_002210975.1;Name=WP_002210975.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_002210975.1;transl_table=11 NC_014029.1 RefSeq gene 1980343 1980570 . + . ID=gene1807;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YPZ3_RS09065 NC_014029.1 Protein Homology CDS 1980343 1980570 . + 0 ID=cds1778;Parent=gene1807;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11 NC_014029.1 RefSeq gene 1980570 1980929 . + . ID=gene1808;Name=YPZ3_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09070;old_locus_tag=YPZ3_1528 NC_014029.1 Protein Homology CDS 1980570 1980929 . + 0 ID=cds1779;Parent=gene1808;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11 NC_014029.1 RefSeq gene 1981017 1981256 . + . ID=gene1809;Name=YPZ3_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09075 NC_014029.1 Protein Homology CDS 1981017 1981256 . + 0 ID=cds1780;Parent=gene1809;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11 NC_014029.1 RefSeq gene 1981237 1982634 . + . ID=gene1810;Name=YPZ3_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09080;old_locus_tag=YPZ3_1529 NC_014029.1 Protein Homology CDS 1981237 1982634 . + 0 ID=cds1781;Parent=gene1810;Dbxref=Genbank:WP_002210979.1;Name=WP_002210979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210979.1;transl_table=11 NC_014029.1 RefSeq gene 1982631 1983692 . + . ID=gene1811;Name=YPZ3_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09085;old_locus_tag=YPZ3_1530 NC_014029.1 Protein Homology CDS 1982631 1983692 . + 0 ID=cds1782;Parent=gene1811;Dbxref=Genbank:WP_002210980.1;Name=WP_002210980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210980.1;transl_table=11 NC_014029.1 RefSeq gene 1983702 1984160 . - . ID=gene1812;Name=YPZ3_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09090;old_locus_tag=YPZ3_1531 NC_014029.1 Protein Homology CDS 1983702 1984160 . - 0 ID=cds1783;Parent=gene1812;Dbxref=Genbank:WP_002210981.1;Name=WP_002210981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210981.1;transl_table=11 NC_014029.1 RefSeq gene 1984222 1984668 . - . ID=gene1813;Name=YPZ3_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09095;old_locus_tag=YPZ3_1532 NC_014029.1 Protein Homology CDS 1984222 1984668 . - 0 ID=cds1784;Parent=gene1813;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11 NC_014029.1 RefSeq gene 1985003 1986580 . + . ID=gene1814;Name=YPZ3_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09100;old_locus_tag=YPZ3_1533 NC_014029.1 Protein Homology CDS 1985003 1986580 . + 0 ID=cds1785;Parent=gene1814;Dbxref=Genbank:WP_002210983.1;Name=WP_002210983.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210983.1;transl_table=11 NC_014029.1 RefSeq repeat_region 1986617 1987339 . + . ID=id146;gbkey=repeat_region NC_014029.1 RefSeq gene 1986727 1987185 . - . ID=gene1815;Name=YPZ3_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09105;old_locus_tag=YPZ3_1534 NC_014029.1 Protein Homology CDS 1986727 1987185 . - 0 ID=cds1786;Parent=gene1815;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 1987438 1987941 . - . ID=gene1816;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YPZ3_RS09110;old_locus_tag=YPZ3_1535 NC_014029.1 Protein Homology CDS 1987438 1987941 . - 0 ID=cds1787;Parent=gene1816;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NC_014029.1 RefSeq gene 1988104 1989078 . + . ID=gene1817;Name=YPZ3_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09115;old_locus_tag=YPZ3_1536 NC_014029.1 Protein Homology CDS 1988104 1989078 . + 0 ID=cds1788;Parent=gene1817;Dbxref=Genbank:WP_002210985.1;Name=WP_002210985.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=mandelate racemase;protein_id=WP_002210985.1;transl_table=11 NC_014029.1 RefSeq gene 1989120 1989827 . - . ID=gene1818;Name=YPZ3_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09120;old_locus_tag=YPZ3_1537 NC_014029.1 Protein Homology CDS 1989120 1989827 . - 0 ID=cds1789;Parent=gene1818;Dbxref=Genbank:WP_002220315.1;Name=WP_002220315.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_002220315.1;transl_table=11 NC_014029.1 RefSeq gene 1990268 1991884 . + . ID=gene1819;Name=YPZ3_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09125;old_locus_tag=YPZ3_1538 NC_014029.1 Protein Homology CDS 1990268 1991884 . + 0 ID=cds1790;Parent=gene1819;Dbxref=Genbank:WP_002210987.1;Name=WP_002210987.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11 NC_014029.1 RefSeq gene 1992127 1993110 . + . ID=gene1820;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YPZ3_RS09130;old_locus_tag=YPZ3_1539 NC_014029.1 Protein Homology CDS 1992127 1993110 . + 0 ID=cds1791;Parent=gene1820;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NC_014029.1 RefSeq gene 1993484 1994323 . - . ID=gene1821;Name=YPZ3_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09135;old_locus_tag=YPZ3_1540 NC_014029.1 Protein Homology CDS 1993484 1994323 . - 0 ID=cds1792;Parent=gene1821;Dbxref=Genbank:WP_002210990.1;Name=WP_002210990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210990.1;transl_table=11 NC_014029.1 RefSeq gene 1994635 1995639 . - . ID=gene1822;Name=YPZ3_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09140;old_locus_tag=YPZ3_1541 NC_014029.1 Protein Homology CDS 1994635 1995639 . - 0 ID=cds1793;Parent=gene1822;Dbxref=Genbank:WP_002210991.1;Name=WP_002210991.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002210991.1;transl_table=11 NC_014029.1 RefSeq gene 1995910 1996851 . - . ID=gene1823;Name=YPZ3_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09145;old_locus_tag=YPZ3_1542 NC_014029.1 Protein Homology CDS 1995910 1996851 . - 0 ID=cds1794;Parent=gene1823;Dbxref=Genbank:WP_002210992.1;Name=WP_002210992.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_002210992.1;transl_table=11 NC_014029.1 RefSeq gene 1997126 2000659 . - . ID=gene1824;Name=YPZ3_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09150;old_locus_tag=YPZ3_1543 NC_014029.1 Protein Homology CDS 1997126 2000659 . - 0 ID=cds1795;Parent=gene1824;Dbxref=Genbank:WP_002210993.1;Name=WP_002210993.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_002210993.1;transl_table=11 NC_014029.1 RefSeq gene 2001138 2001470 . + . ID=gene1825;Name=YPZ3_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09155;old_locus_tag=YPZ3_1544 NC_014029.1 Protein Homology CDS 2001138 2001470 . + 0 ID=cds1796;Parent=gene1825;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11 NC_014029.1 RefSeq gene 2001530 2002189 . - . ID=gene1826;Name=YPZ3_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09160;old_locus_tag=YPZ3_1545 NC_014029.1 Protein Homology CDS 2001530 2002189 . - 0 ID=cds1797;Parent=gene1826;Dbxref=Genbank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002210995.1;transl_table=11 NC_014029.1 RefSeq gene 2002504 2002815 . + . ID=gene1827;Name=YPZ3_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09165;old_locus_tag=YPZ3_1546 NC_014029.1 Protein Homology CDS 2002504 2002815 . + 0 ID=cds1798;Parent=gene1827;Dbxref=Genbank:WP_002210996.1;Name=WP_002210996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210996.1;transl_table=11 NC_014029.1 RefSeq gene 2002873 2003325 . - . ID=gene1828;Name=YPZ3_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09170;old_locus_tag=YPZ3_1547 NC_014029.1 Protein Homology CDS 2002873 2003325 . - 0 ID=cds1799;Parent=gene1828;Dbxref=Genbank:WP_002214605.1;Name=WP_002214605.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_002214605.1;transl_table=11 NC_014029.1 RefSeq gene 2003395 2004387 . - . ID=gene1829;Name=YPZ3_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09175;old_locus_tag=YPZ3_1548 NC_014029.1 Protein Homology CDS 2003395 2004387 . - 0 ID=cds1800;Parent=gene1829;Dbxref=Genbank:WP_002210998.1;Name=WP_002210998.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210998.1;transl_table=11 NC_014029.1 RefSeq gene 2004653 2007349 . + . ID=gene1830;Name=YPZ3_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09180;old_locus_tag=YPZ3_1549 NC_014029.1 Protein Homology CDS 2004653 2007349 . + 0 ID=cds1801;Parent=gene1830;Dbxref=Genbank:WP_002210999.1;Name=WP_002210999.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210999.1;transl_table=11 NC_014029.1 RefSeq gene 2007346 2007540 . + . ID=gene1831;Name=YPZ3_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09185 NC_014029.1 Protein Homology CDS 2007346 2007540 . + 0 ID=cds1802;Parent=gene1831;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11 NC_014029.1 RefSeq gene 2007550 2007921 . + . ID=gene1832;Name=YPZ3_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09190;old_locus_tag=YPZ3_1550 NC_014029.1 Protein Homology CDS 2007550 2007921 . + 0 ID=cds1803;Parent=gene1832;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11 NC_014029.1 RefSeq gene 2008140 2009531 . - . ID=gene1833;Name=YPZ3_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09195;old_locus_tag=YPZ3_1551 NC_014029.1 Protein Homology CDS 2008140 2009531 . - 0 ID=cds1804;Parent=gene1833;Dbxref=Genbank:WP_002211002.1;Name=WP_002211002.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_002211002.1;transl_table=11 NC_014029.1 RefSeq gene 2009741 2010697 . + . ID=gene1834;Name=YPZ3_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09200;old_locus_tag=YPZ3_1552 NC_014029.1 Protein Homology CDS 2009741 2010697 . + 0 ID=cds1805;Parent=gene1834;Dbxref=Genbank:WP_002211003.1;Name=WP_002211003.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211003.1;transl_table=11 NC_014029.1 RefSeq gene 2010818 2011423 . - . ID=gene1835;Name=YPZ3_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09205;old_locus_tag=YPZ3_1553 NC_014029.1 Protein Homology CDS 2010818 2011423 . - 0 ID=cds1806;Parent=gene1835;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NC_014029.1 RefSeq gene 2011891 2015733 . + . ID=gene1836;Name=YPZ3_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09210;old_locus_tag=YPZ3_1554 NC_014029.1 Protein Homology CDS 2011891 2015733 . + 0 ID=cds1807;Parent=gene1836;Dbxref=Genbank:WP_002214608.1;Name=WP_002214608.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_002214608.1;transl_table=11 NC_014029.1 RefSeq gene 2016072 2016401 . + . ID=gene1837;Name=YPZ3_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09215 NC_014029.1 Protein Homology CDS 2016072 2016401 . + 0 ID=cds1808;Parent=gene1837;Dbxref=Genbank:WP_002214609.1;Name=WP_002214609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214609.1;transl_table=11 NC_014029.1 RefSeq gene 2016398 2016721 . + . ID=gene1838;Name=YPZ3_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09220;old_locus_tag=YPZ3_1555 NC_014029.1 Protein Homology CDS 2016398 2016721 . + 0 ID=cds1809;Parent=gene1838;Dbxref=Genbank:WP_002211007.1;Name=WP_002211007.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211007.1;transl_table=11 NC_014029.1 RefSeq gene 2016777 2017613 . - . ID=gene1839;Name=YPZ3_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09225;old_locus_tag=YPZ3_1556 NC_014029.1 Protein Homology CDS 2016777 2017613 . - 0 ID=cds1810;Parent=gene1839;Dbxref=Genbank:WP_002211008.1;Name=WP_002211008.1;gbkey=CDS;product=peptidase;protein_id=WP_002211008.1;transl_table=11 NC_014029.1 RefSeq gene 2017947 2018243 . - . ID=gene1840;Name=YPZ3_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09230 NC_014029.1 Protein Homology CDS 2017947 2018243 . - 0 ID=cds1811;Parent=gene1840;Dbxref=Genbank:WP_011171867.1;Name=WP_011171867.1;gbkey=CDS;product=acid-shock protein;protein_id=WP_011171867.1;transl_table=11 NC_014029.1 RefSeq gene 2018240 2018452 . - . ID=gene1841;Name=YPZ3_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09235 NC_014029.1 Protein Homology CDS 2018240 2018452 . - 0 ID=cds1812;Parent=gene1841;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11 NC_014029.1 RefSeq gene 2018847 2019401 . + . ID=gene1842;Name=YPZ3_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09240;old_locus_tag=YPZ3_1557 NC_014029.1 Protein Homology CDS 2018847 2019401 . + 0 ID=cds1813;Parent=gene1842;Dbxref=Genbank:WP_002211010.1;Name=WP_002211010.1;gbkey=CDS;product=cytochrome B561;protein_id=WP_002211010.1;transl_table=11 NC_014029.1 RefSeq gene 2019427 2020005 . + . ID=gene1843;Name=YPZ3_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09245;old_locus_tag=YPZ3_1558 NC_014029.1 Protein Homology CDS 2019427 2020005 . + 0 ID=cds1814;Parent=gene1843;Dbxref=Genbank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211011.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2020042 2020216 . + . ID=id147;gbkey=repeat_region NC_014029.1 RefSeq gene 2020570 2020728 . + . ID=gene1844;Name=YPZ3_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09250 NC_014029.1 Protein Homology CDS 2020570 2020728 . + 0 ID=cds1815;Parent=gene1844;Dbxref=Genbank:WP_002214618.1;Name=WP_002214618.1;gbkey=CDS;product=invertase;protein_id=WP_002214618.1;transl_table=11 NC_014029.1 RefSeq gene 2020832 2021188 . - . ID=gene1845;Name=YPZ3_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09255;old_locus_tag=YPZ3_1559 NC_014029.1 Protein Homology CDS 2020832 2021188 . - 0 ID=cds1816;Parent=gene1845;Dbxref=Genbank:WP_002227910.1;Name=WP_002227910.1;gbkey=CDS;product=DNA gyrase;protein_id=WP_002227910.1;transl_table=11 NC_014029.1 RefSeq gene 2021191 2023815 . - . ID=gene1846;Name=YPZ3_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09260;old_locus_tag=YPZ3_1560 NC_014029.1 Protein Homology CDS 2021191 2023815 . - 0 ID=cds1817;Parent=gene1846;Dbxref=Genbank:WP_002211013.1;Name=WP_002211013.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_002211013.1;transl_table=11 NC_014029.1 RefSeq gene 2024625 2024795 . + . ID=gene1847;Name=YPZ3_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09265 NC_014029.1 Protein Homology CDS 2024625 2024795 . + 0 ID=cds1818;Parent=gene1847;Dbxref=Genbank:WP_025470768.1;Name=WP_025470768.1;gbkey=CDS;product=transposase;protein_id=WP_025470768.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2024636 2025354 . + . ID=id148;gbkey=repeat_region NC_014029.1 RefSeq gene 2024785 2025243 . + . ID=gene1848;Name=YPZ3_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09270;old_locus_tag=YPZ3_1561 NC_014029.1 Protein Homology CDS 2024785 2025243 . + 0 ID=cds1819;Parent=gene1848;Dbxref=Genbank:WP_041176127.1;Name=WP_041176127.1;gbkey=CDS;product=transposase;protein_id=WP_041176127.1;transl_table=11 NC_014029.1 RefSeq gene 2025365 2026864 . - . ID=gene1849;Name=YPZ3_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09275;old_locus_tag=YPZ3_1562 NC_014029.1 Protein Homology CDS 2025365 2026864 . - 0 ID=cds1820;Parent=gene1849;Dbxref=Genbank:WP_002211014.1;Name=WP_002211014.1;gbkey=CDS;product=peptidase M32;protein_id=WP_002211014.1;transl_table=11 NC_014029.1 RefSeq gene 2026958 2028214 . - . ID=gene1850;Name=YPZ3_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09280;old_locus_tag=YPZ3_1563 NC_014029.1 Protein Homology CDS 2026958 2028214 . - 0 ID=cds1821;Parent=gene1850;Dbxref=Genbank:WP_002354278.1;Name=WP_002354278.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002354278.1;transl_table=11 NC_014029.1 RefSeq gene 2028263 2029009 . - . ID=gene1851;Name=YPZ3_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09285;old_locus_tag=YPZ3_1564 NC_014029.1 Protein Homology CDS 2028263 2029009 . - 0 ID=cds1822;Parent=gene1851;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11 NC_014029.1 RefSeq gene 2029306 2029722 . + . ID=gene1852;Name=YPZ3_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09290;old_locus_tag=YPZ3_1565 NC_014029.1 Protein Homology CDS 2029306 2029722 . + 0 ID=cds1823;Parent=gene1852;Dbxref=Genbank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NC_014029.1 RefSeq gene 2029746 2031137 . - . ID=gene1853;Name=YPZ3_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09295;old_locus_tag=YPZ3_1566 NC_014029.1 Protein Homology CDS 2029746 2031137 . - 0 ID=cds1824;Parent=gene1853;Dbxref=Genbank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_002211017.1;transl_table=11 NC_014029.1 RefSeq gene 2031407 2032360 . - . ID=gene1854;Name=YPZ3_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09300;old_locus_tag=YPZ3_1567 NC_014029.1 Protein Homology CDS 2031407 2032360 . - 0 ID=cds1825;Parent=gene1854;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11 NC_014029.1 RefSeq gene 2032566 2032769 . + . ID=gene1855;Name=YPZ3_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09305 NC_014029.1 Protein Homology CDS 2032566 2032769 . + 0 ID=cds1826;Parent=gene1855;Dbxref=Genbank:WP_002227912.1;Name=WP_002227912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227912.1;transl_table=11 NC_014029.1 RefSeq gene 2032890 2034416 . + . ID=gene1856;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YPZ3_RS09310;old_locus_tag=YPZ3_1568 NC_014029.1 Protein Homology CDS 2032890 2034416 . + 0 ID=cds1827;Parent=gene1856;Dbxref=Genbank:WP_002211019.1;Name=WP_002211019.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_002211019.1;transl_table=11 NC_014029.1 RefSeq gene 2034489 2035883 . + . ID=gene1857;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YPZ3_RS09315;old_locus_tag=YPZ3_1569 NC_014029.1 Protein Homology CDS 2034489 2035883 . + 0 ID=cds1828;Parent=gene1857;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2035929 2036103 . + . ID=id149;gbkey=repeat_region NC_014029.1 RefSeq gene 2036158 2037114 . - . ID=gene1858;Name=YPZ3_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09320;old_locus_tag=YPZ3_1570 NC_014029.1 Protein Homology CDS 2036158 2037114 . - 0 ID=cds1829;Parent=gene1858;Dbxref=Genbank:WP_002211021.1;Name=WP_002211021.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein E;protein_id=WP_002211021.1;transl_table=11 NC_014029.1 RefSeq gene 2037249 2038001 . - . ID=gene1859;Name=YPZ3_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09325;old_locus_tag=YPZ3_1571 NC_014029.1 Protein Homology CDS 2037249 2038001 . - 0 ID=cds1830;Parent=gene1859;Dbxref=Genbank:WP_002211022.1;Name=WP_002211022.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate and nitrate reduction regulatory protein;protein_id=WP_002211022.1;transl_table=11 NC_014029.1 RefSeq gene 2038074 2038592 . - . ID=gene1860;Name=YPZ3_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09330;old_locus_tag=YPZ3_1572 NC_014029.1 Protein Homology CDS 2038074 2038592 . - 0 ID=cds1831;Parent=gene1860;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11 NC_014029.1 RefSeq gene 2038833 2040278 . + . ID=gene1861;Name=YPZ3_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09335;old_locus_tag=YPZ3_1573 NC_014029.1 Protein Homology CDS 2038833 2040278 . + 0 ID=cds1832;Parent=gene1861;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NC_014029.1 RefSeq gene 2040824 2041834 . + . ID=gene1862;Name=YPZ3_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09340;old_locus_tag=YPZ3_1574 NC_014029.1 Protein Homology CDS 2040824 2041834 . + 0 ID=cds1833;Parent=gene1862;Dbxref=Genbank:WP_002227913.1;Name=WP_002227913.1;gbkey=CDS;product=membrane protein;protein_id=WP_002227913.1;transl_table=11 NC_014029.1 RefSeq gene 2041834 2043219 . + . ID=gene1863;Name=YPZ3_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09345;old_locus_tag=YPZ3_1575 NC_014029.1 Protein Homology CDS 2041834 2043219 . + 0 ID=cds1834;Parent=gene1863;Dbxref=Genbank:WP_002227914.1;Name=WP_002227914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227914.1;transl_table=11 NC_014029.1 RefSeq gene 2043350 2044024 . + . ID=gene1864;Name=YPZ3_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09350;old_locus_tag=YPZ3_1576 NC_014029.1 Protein Homology CDS 2043350 2044024 . + 0 ID=cds1835;Parent=gene1864;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11 NC_014029.1 RefSeq gene 2044091 2044393 . - . ID=gene1865;Name=YPZ3_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09355;old_locus_tag=YPZ3_1577 NC_014029.1 Protein Homology CDS 2044091 2044393 . - 0 ID=cds1836;Parent=gene1865;Dbxref=Genbank:WP_002211026.1;Name=WP_002211026.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211026.1;transl_table=11 NC_014029.1 RefSeq gene 2044395 2046062 . - . ID=gene1866;Name=YPZ3_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09360;old_locus_tag=YPZ3_1578 NC_014029.1 Protein Homology CDS 2044395 2046062 . - 0 ID=cds1837;Parent=gene1866;Dbxref=Genbank:WP_002211027.1;Name=WP_002211027.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211027.1;transl_table=11 NC_014029.1 RefSeq gene 2046664 2047458 . + . ID=gene1867;Name=YPZ3_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09365;old_locus_tag=YPZ3_1579 NC_014029.1 Protein Homology CDS 2046664 2047458 . + 0 ID=cds1838;Parent=gene1867;Dbxref=Genbank:WP_002220345.1;Name=WP_002220345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220345.1;transl_table=11 NC_014029.1 RefSeq gene 2047627 2050167 . - . ID=gene1868;Name=YPZ3_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09370;old_locus_tag=YPZ3_1580 NC_014029.1 Protein Homology CDS 2047627 2050167 . - 0 ID=cds1839;Parent=gene1868;Dbxref=Genbank:WP_002211029.1;Name=WP_002211029.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211029.1;transl_table=11 NC_014029.1 RefSeq gene 2050164 2053236 . - . ID=gene1869;Name=YPZ3_RS09375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS09375;pseudo=true NC_014029.1 Protein Homology CDS 2050164 2053236 . - 0 ID=cds1840;Parent=gene1869;exception=annotated by transcript or proteomic data;gbkey=CDS;product=virulence factor SrfB;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2053241 2054674 . - . ID=gene1870;Name=YPZ3_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09380;old_locus_tag=YPZ3_1583 NC_014029.1 Protein Homology CDS 2053241 2054674 . - 0 ID=cds1841;Parent=gene1870;Dbxref=Genbank:WP_002211031.1;Name=WP_002211031.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211031.1;transl_table=11 NC_014029.1 RefSeq gene 2054880 2056295 . + . ID=gene1871;Name=YPZ3_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09385;old_locus_tag=YPZ3_1584 NC_014029.1 Protein Homology CDS 2054880 2056295 . + 0 ID=cds1842;Parent=gene1871;Dbxref=Genbank:WP_013060327.1;Name=WP_013060327.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_013060327.1;transl_table=11 NC_014029.1 RefSeq gene 2056905 2057255 . + . ID=gene1872;Name=YPZ3_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09390;old_locus_tag=YPZ3_1585 NC_014029.1 Protein Homology CDS 2056905 2057255 . + 0 ID=cds1843;Parent=gene1872;Dbxref=Genbank:WP_002211036.1;Name=WP_002211036.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211036.1;transl_table=11 NC_014029.1 RefSeq gene 2057399 2057869 . + . ID=gene1873;Name=YPZ3_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09395;old_locus_tag=YPZ3_1586 NC_014029.1 Protein Homology CDS 2057399 2057869 . + 0 ID=cds1844;Parent=gene1873;Dbxref=Genbank:WP_002211037.1;Name=WP_002211037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211037.1;transl_table=11 NC_014029.1 RefSeq gene 2057933 2058949 . + . ID=gene1874;Name=YPZ3_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09400;old_locus_tag=YPZ3_1587 NC_014029.1 Protein Homology CDS 2057933 2058949 . + 0 ID=cds1845;Parent=gene1874;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NC_014029.1 RefSeq gene 2059071 2059181 . + . ID=gene1875;Name=YPZ3_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09405 NC_014029.1 Protein Homology CDS 2059071 2059181 . + 0 ID=cds1846;Parent=gene1875;Dbxref=Genbank:WP_002214514.1;Name=WP_002214514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214514.1;transl_table=11 NC_014029.1 RefSeq gene 2059549 2060829 . + . ID=gene1876;Name=YPZ3_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09410;old_locus_tag=YPZ3_1588 NC_014029.1 Protein Homology CDS 2059549 2060829 . + 0 ID=cds1847;Parent=gene1876;Dbxref=Genbank:WP_002210574.1;Name=WP_002210574.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_002210574.1;transl_table=11 NC_014029.1 RefSeq gene 2060933 2061601 . - . ID=gene1877;Name=YPZ3_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09415;old_locus_tag=YPZ3_1589 NC_014029.1 Protein Homology CDS 2060933 2061601 . - 0 ID=cds1848;Parent=gene1877;Dbxref=Genbank:WP_002210575.1;Name=WP_002210575.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002210575.1;transl_table=11 NC_014029.1 RefSeq gene 2061825 2063042 . - . ID=gene1878;Name=YPZ3_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09420;old_locus_tag=YPZ3_1590 NC_014029.1 Protein Homology CDS 2061825 2063042 . - 0 ID=cds1849;Parent=gene1878;Dbxref=Genbank:WP_002210576.1;Name=WP_002210576.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210576.1;transl_table=11 NC_014029.1 RefSeq gene 2063256 2064134 . - . ID=gene1879;Name=YPZ3_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09425;old_locus_tag=YPZ3_1591 NC_014029.1 Protein Homology CDS 2063256 2064134 . - 0 ID=cds1850;Parent=gene1879;Dbxref=Genbank:WP_002220360.1;Name=WP_002220360.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220360.1;transl_table=11 NC_014029.1 RefSeq gene 2064347 2065645 . + . ID=gene1880;Name=YPZ3_RS09430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS09430;pseudo=true NC_014029.1 Protein Homology CDS 2064347 2065645 . + 0 ID=cds1851;Parent=gene1880;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2065463..2065465%2Caa:Other);transl_table=11 NC_014029.1 RefSeq gene 2065850 2066785 . + . ID=gene1881;Name=YPZ3_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09435;old_locus_tag=YPZ3_1593 NC_014029.1 Protein Homology CDS 2065850 2066785 . + 0 ID=cds1852;Parent=gene1881;Dbxref=Genbank:WP_002227921.1;Name=WP_002227921.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_002227921.1;transl_table=11 NC_014029.1 RefSeq gene 2066865 2068262 . - . ID=gene1882;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YPZ3_RS09440;old_locus_tag=YPZ3_1594 NC_014029.1 Protein Homology CDS 2066865 2068262 . - 0 ID=cds1853;Parent=gene1882;Dbxref=Genbank:WP_002210578.1;Name=WP_002210578.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase class II;protein_id=WP_002210578.1;transl_table=11 NC_014029.1 RefSeq gene 2068546 2069721 . + . ID=gene1883;Name=YPZ3_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09445;old_locus_tag=YPZ3_1595 NC_014029.1 Protein Homology CDS 2068546 2069721 . + 0 ID=cds1854;Parent=gene1883;Dbxref=Genbank:WP_002210579.1;Name=WP_002210579.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_002210579.1;transl_table=11 NC_014029.1 RefSeq gene 2069961 2071505 . + . ID=gene1884;Name=YPZ3_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09450;old_locus_tag=YPZ3_1596 NC_014029.1 Protein Homology CDS 2069961 2071505 . + 0 ID=cds1855;Parent=gene1884;Dbxref=Genbank:WP_002216605.1;Name=WP_002216605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216605.1;transl_table=11 NC_014029.1 RefSeq gene 2071554 2072153 . - . ID=gene1885;Name=YPZ3_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09455;old_locus_tag=YPZ3_1597 NC_014029.1 Protein Homology CDS 2071554 2072153 . - 0 ID=cds1856;Parent=gene1885;Dbxref=Genbank:WP_002210583.1;Name=WP_002210583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210583.1;transl_table=11 NC_014029.1 RefSeq gene 2072359 2073387 . - . ID=gene1886;Name=YPZ3_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09460;old_locus_tag=YPZ3_1598 NC_014029.1 Protein Homology CDS 2072359 2073387 . - 0 ID=cds1857;Parent=gene1886;Dbxref=Genbank:WP_013060328.1;Name=WP_013060328.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060328.1;transl_table=11 NC_014029.1 RefSeq gene 2073581 2074630 . - . ID=gene1887;Name=YPZ3_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09465;old_locus_tag=YPZ3_1599 NC_014029.1 Protein Homology CDS 2073581 2074630 . - 0 ID=cds1858;Parent=gene1887;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NC_014029.1 RefSeq gene 2074758 2075690 . - . ID=gene1888;Name=YPZ3_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09470;old_locus_tag=YPZ3_1600 NC_014029.1 Protein Homology CDS 2074758 2075690 . - 0 ID=cds1859;Parent=gene1888;Dbxref=Genbank:WP_002210586.1;Name=WP_002210586.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210586.1;transl_table=11 NC_014029.1 RefSeq gene 2075911 2076960 . - . ID=gene1889;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YPZ3_RS09475;old_locus_tag=YPZ3_1601 NC_014029.1 Protein Homology CDS 2075911 2076960 . - 0 ID=cds1860;Parent=gene1889;Dbxref=Genbank:WP_002210587.1;Name=WP_002210587.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_002210587.1;transl_table=11 NC_014029.1 RefSeq gene 2076978 2078549 . - . ID=gene1890;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YPZ3_RS09480;old_locus_tag=YPZ3_1602 NC_014029.1 Protein Homology CDS 2076978 2078549 . - 0 ID=cds1861;Parent=gene1890;Dbxref=Genbank:WP_002210588.1;Name=WP_002210588.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_002210588.1;transl_table=11 NC_014029.1 RefSeq gene 2078647 2079630 . - . ID=gene1891;Name=YPZ3_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09485;old_locus_tag=YPZ3_1603 NC_014029.1 Protein Homology CDS 2078647 2079630 . - 0 ID=cds1862;Parent=gene1891;Dbxref=Genbank:WP_002210589.1;Name=WP_002210589.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NC_014029.1 RefSeq gene 2080038 2081741 . + . ID=gene1892;Name=YPZ3_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09490;old_locus_tag=YPZ3_1604 NC_014029.1 Protein Homology CDS 2080038 2081741 . + 0 ID=cds1863;Parent=gene1892;Dbxref=Genbank:WP_002210590.1;Name=WP_002210590.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_002210590.1;transl_table=11 NC_014029.1 RefSeq gene 2081825 2083327 . + . ID=gene1893;Name=YPZ3_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09495;old_locus_tag=YPZ3_1605 NC_014029.1 Protein Homology CDS 2081825 2083327 . + 0 ID=cds1864;Parent=gene1893;Dbxref=Genbank:WP_002210591.1;Name=WP_002210591.1;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_002210591.1;transl_table=11 NC_014029.1 RefSeq gene 2083517 2085655 . - . ID=gene1894;Name=YPZ3_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09500;old_locus_tag=YPZ3_1606 NC_014029.1 Protein Homology CDS 2083517 2085655 . - 0 ID=cds1865;Parent=gene1894;Dbxref=Genbank:WP_002210593.1;Name=WP_002210593.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002210593.1;transl_table=11 NC_014029.1 RefSeq gene 2085657 2086025 . - . ID=gene1895;Name=YPZ3_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09505;old_locus_tag=YPZ3_1607 NC_014029.1 Protein Homology CDS 2085657 2086025 . - 0 ID=cds1866;Parent=gene1895;Dbxref=Genbank:WP_002215882.1;Name=WP_002215882.1;gbkey=CDS;product=hemolysin D;protein_id=WP_002215882.1;transl_table=11 NC_014029.1 RefSeq gene 2086025 2087026 . - . ID=gene1896;Name=YPZ3_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09510;old_locus_tag=YPZ3_1608 NC_014029.1 Protein Homology CDS 2086025 2087026 . - 0 ID=cds1867;Parent=gene1896;Dbxref=Genbank:WP_002215881.1;Name=WP_002215881.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002215881.1;transl_table=11 NC_014029.1 RefSeq gene 2087051 2087272 . - . ID=gene1897;Name=YPZ3_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09515 NC_014029.1 GeneMarkS+ CDS 2087051 2087272 . - 0 ID=cds1868;Parent=gene1897;Dbxref=Genbank:WP_002215880.1;Name=WP_002215880.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215880.1;transl_table=11 NC_014029.1 RefSeq gene 2087325 2089109 . - . ID=gene1898;Name=YPZ3_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09520;old_locus_tag=YPZ3_1609 NC_014029.1 Protein Homology CDS 2087325 2089109 . - 0 ID=cds1869;Parent=gene1898;Dbxref=Genbank:WP_002215879.1;Name=WP_002215879.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002215879.1;transl_table=11 NC_014029.1 RefSeq gene 2089584 2090027 . + . ID=gene1899;Name=YPZ3_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09525;old_locus_tag=YPZ3_1610 NC_014029.1 Protein Homology CDS 2089584 2090027 . + 0 ID=cds1870;Parent=gene1899;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11 NC_014029.1 RefSeq gene 2090155 2090736 . + . ID=gene1900;Name=YPZ3_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09530;old_locus_tag=YPZ3_1611 NC_014029.1 Protein Homology CDS 2090155 2090736 . + 0 ID=cds1871;Parent=gene1900;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11 NC_014029.1 RefSeq gene 2090736 2091302 . + . ID=gene1901;Name=YPZ3_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09535;old_locus_tag=YPZ3_1612 NC_014029.1 Protein Homology CDS 2090736 2091302 . + 0 ID=cds1872;Parent=gene1901;Dbxref=Genbank:WP_002210596.1;Name=WP_002210596.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit B;protein_id=WP_002210596.1;transl_table=11 NC_014029.1 RefSeq gene 2091352 2093214 . + . ID=gene1902;Name=YPZ3_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09540;old_locus_tag=YPZ3_1613 NC_014029.1 Protein Homology CDS 2091352 2093214 . + 0 ID=cds1873;Parent=gene1902;Dbxref=Genbank:WP_002210597.1;Name=WP_002210597.1;gbkey=CDS;product=electron transport complex subunit C;protein_id=WP_002210597.1;transl_table=11 NC_014029.1 RefSeq gene 2093319 2094212 . - . ID=gene1903;Name=YPZ3_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09545;old_locus_tag=YPZ3_1614 NC_014029.1 Protein Homology CDS 2093319 2094212 . - 0 ID=cds1874;Parent=gene1903;Dbxref=Genbank:WP_002210598.1;Name=WP_002210598.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210598.1;transl_table=11 NC_014029.1 RefSeq gene 2094701 2095795 . + . ID=gene1904;Name=YPZ3_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09550;old_locus_tag=YPZ3_1615 NC_014029.1 Protein Homology CDS 2094701 2095795 . + 0 ID=cds1875;Parent=gene1904;Dbxref=Genbank:WP_002210599.1;Name=WP_002210599.1;gbkey=CDS;product=electron transporter RnfG;protein_id=WP_002210599.1;transl_table=11 NC_014029.1 RefSeq gene 2095805 2096434 . + . ID=gene1905;Name=YPZ3_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09555;old_locus_tag=YPZ3_1616 NC_014029.1 Protein Homology CDS 2095805 2096434 . + 0 ID=cds1876;Parent=gene1905;Dbxref=Genbank:WP_002210600.1;Name=WP_002210600.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit G;protein_id=WP_002210600.1;transl_table=11 NC_014029.1 RefSeq gene 2096431 2097132 . + . ID=gene1906;Name=YPZ3_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09560;old_locus_tag=YPZ3_1617 NC_014029.1 Protein Homology CDS 2096431 2097132 . + 0 ID=cds1877;Parent=gene1906;Dbxref=Genbank:WP_002210601.1;Name=WP_002210601.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_002210601.1;transl_table=11 NC_014029.1 RefSeq gene 2097129 2097770 . + . ID=gene1907;Name=YPZ3_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09565;old_locus_tag=YPZ3_1618 NC_014029.1 Protein Homology CDS 2097129 2097770 . + 0 ID=cds1878;Parent=gene1907;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NC_014029.1 RefSeq gene 2097953 2098951 . - . ID=gene1908;Name=YPZ3_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09570;old_locus_tag=YPZ3_1619 NC_014029.1 Protein Homology CDS 2097953 2098951 . - 0 ID=cds1879;Parent=gene1908;Dbxref=Genbank:WP_002210603.1;Name=WP_002210603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210603.1;transl_table=11 NC_014029.1 RefSeq gene 2098989 2100299 . - . ID=gene1909;Name=YPZ3_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09575;old_locus_tag=YPZ3_1620 NC_014029.1 Protein Homology CDS 2098989 2100299 . - 0 ID=cds1880;Parent=gene1909;Dbxref=Genbank:WP_002210604.1;Name=WP_002210604.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210604.1;transl_table=11 NC_014029.1 RefSeq gene 2100958 2102892 . + . ID=gene1910;Name=YPZ3_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09580;old_locus_tag=YPZ3_1621 NC_014029.1 Protein Homology CDS 2100958 2102892 . + 0 ID=cds1881;Parent=gene1910;Dbxref=Genbank:WP_002210605.1;Name=WP_002210605.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_002210605.1;transl_table=11 NC_014029.1 RefSeq gene 2103242 2105308 . + . ID=gene1911;Name=YPZ3_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09585;old_locus_tag=YPZ3_1622 NC_014029.1 Protein Homology CDS 2103242 2105308 . + 0 ID=cds1882;Parent=gene1911;Dbxref=Genbank:WP_002220371.1;Name=WP_002220371.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_002220371.1;transl_table=11 NC_014029.1 RefSeq gene 2105301 2105606 . + . ID=gene1912;Name=YPZ3_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09590;old_locus_tag=YPZ3_1623 NC_014029.1 Protein Homology CDS 2105301 2105606 . + 0 ID=cds1883;Parent=gene1912;Dbxref=Genbank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210607.1;transl_table=11 NC_014029.1 RefSeq gene 2105723 2106388 . - . ID=gene1913;Name=YPZ3_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09595;old_locus_tag=YPZ3_1624 NC_014029.1 Protein Homology CDS 2105723 2106388 . - 0 ID=cds1884;Parent=gene1913;Dbxref=Genbank:WP_002215192.1;Name=WP_002215192.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11 NC_014029.1 RefSeq gene 2106722 2106970 . + . ID=gene1914;Name=YPZ3_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09600 NC_014029.1 Protein Homology CDS 2106722 2106970 . + 0 ID=cds1885;Parent=gene1914;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11 NC_014029.1 RefSeq gene 2106999 2107694 . - . ID=gene1915;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPZ3_RS09605;old_locus_tag=YPZ3_1625 NC_014029.1 Protein Homology CDS 2106999 2107694 . - 0 ID=cds1886;Parent=gene1915;Dbxref=Genbank:WP_002210610.1;Name=WP_002210610.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NC_014029.1 RefSeq gene 2108174 2108389 . + . ID=gene1916;Name=YPZ3_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09610 NC_014029.1 Protein Homology CDS 2108174 2108389 . + 0 ID=cds1887;Parent=gene1916;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11 NC_014029.1 RefSeq gene 2108627 2108953 . - . ID=gene1917;Name=YPZ3_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09615;old_locus_tag=YPZ3_1626 NC_014029.1 Protein Homology CDS 2108627 2108953 . - 0 ID=cds1888;Parent=gene1917;Dbxref=Genbank:WP_002210612.1;Name=WP_002210612.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_002210612.1;transl_table=11 NC_014029.1 RefSeq gene 2108953 2109690 . - . ID=gene1918;Name=YPZ3_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09620;old_locus_tag=YPZ3_1627 NC_014029.1 Protein Homology CDS 2108953 2109690 . - 0 ID=cds1889;Parent=gene1918;Dbxref=Genbank:WP_002210613.1;Name=WP_002210613.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_002210613.1;transl_table=11 NC_014029.1 RefSeq gene 2110160 2110459 . + . ID=gene1919;Name=YPZ3_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09625 NC_014029.1 Protein Homology CDS 2110160 2110459 . + 0 ID=cds1890;Parent=gene1919;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NC_014029.1 RefSeq gene 2110581 2111750 . - . ID=gene1920;Name=YPZ3_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09630;old_locus_tag=YPZ3_1628 NC_014029.1 Protein Homology CDS 2110581 2111750 . - 0 ID=cds1891;Parent=gene1920;Dbxref=Genbank:WP_002210615.1;Name=WP_002210615.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210615.1;transl_table=11 NC_014029.1 RefSeq gene 2111757 2112068 . - . ID=gene1921;Name=YPZ3_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09635;old_locus_tag=YPZ3_1629 NC_014029.1 Protein Homology CDS 2111757 2112068 . - 0 ID=cds1892;Parent=gene1921;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11 NC_014029.1 RefSeq gene 2112237 2112998 . - . ID=gene1922;Name=YPZ3_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09640;old_locus_tag=YPZ3_1630 NC_014029.1 Protein Homology CDS 2112237 2112998 . - 0 ID=cds1893;Parent=gene1922;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NC_014029.1 RefSeq gene 2113504 2114094 . + . ID=gene1923;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YPZ3_RS09645;old_locus_tag=YPZ3_1631 NC_014029.1 Protein Homology CDS 2113504 2114094 . + 0 ID=cds1894;Parent=gene1923;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11 NC_014029.1 RefSeq gene 2114258 2116930 . - . ID=gene1924;Name=YPZ3_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09650;old_locus_tag=YPZ3_1632 NC_014029.1 Protein Homology CDS 2114258 2116930 . - 0 ID=cds1895;Parent=gene1924;Dbxref=Genbank:WP_002215187.1;Name=WP_002215187.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_002215187.1;transl_table=11 NC_014029.1 RefSeq gene 2117294 2118151 . - . ID=gene1925;Name=YPZ3_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09655;old_locus_tag=YPZ3_1633 NC_014029.1 Protein Homology CDS 2117294 2118151 . - 0 ID=cds1896;Parent=gene1925;Dbxref=Genbank:WP_002210620.1;Name=WP_002210620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210620.1;transl_table=11 NC_014029.1 RefSeq gene 2118487 2119461 . - . ID=gene1926;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YPZ3_RS09660;old_locus_tag=YPZ3_1634 NC_014029.1 Protein Homology CDS 2118487 2119461 . - 0 ID=cds1897;Parent=gene1926;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11 NC_014029.1 RefSeq gene 2119858 2122473 . - . ID=gene1927;Name=YPZ3_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09665;old_locus_tag=YPZ3_1635 NC_014029.1 Protein Homology CDS 2119858 2122473 . - 0 ID=cds1898;Parent=gene1927;Dbxref=Genbank:WP_002210622.1;Name=WP_002210622.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_002210622.1;transl_table=11 NC_014029.1 RefSeq gene 2122500 2122799 . - . ID=gene1928;Name=YPZ3_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09670 NC_014029.1 Protein Homology CDS 2122500 2122799 . - 0 ID=cds1899;Parent=gene1928;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NC_014029.1 RefSeq gene 2122892 2123143 . + . ID=gene1929;Name=YPZ3_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09675 NC_014029.1 Protein Homology CDS 2122892 2123143 . + 0 ID=cds1900;Parent=gene1929;Dbxref=Genbank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210623.1;transl_table=11 NC_014029.1 RefSeq gene 2123262 2124308 . - . ID=gene1930;Name=YPZ3_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09680;old_locus_tag=YPZ3_1636 NC_014029.1 Protein Homology CDS 2123262 2124308 . - 0 ID=cds1901;Parent=gene1930;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11 NC_014029.1 RefSeq gene 2124480 2125241 . + . ID=gene1931;Name=YPZ3_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09685;old_locus_tag=YPZ3_1637 NC_014029.1 Protein Homology CDS 2124480 2125241 . + 0 ID=cds1902;Parent=gene1931;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11 NC_014029.1 RefSeq gene 2125258 2125848 . + . ID=gene1932;Name=YPZ3_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09690;old_locus_tag=YPZ3_1638 NC_014029.1 Protein Homology CDS 2125258 2125848 . + 0 ID=cds1903;Parent=gene1932;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11 NC_014029.1 RefSeq gene 2125971 2127005 . - . ID=gene1933;Name=YPZ3_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09695;old_locus_tag=YPZ3_1639 NC_014029.1 Protein Homology CDS 2125971 2127005 . - 0 ID=cds1904;Parent=gene1933;Dbxref=Genbank:WP_002210627.1;Name=WP_002210627.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_002210627.1;transl_table=11 NC_014029.1 RefSeq gene 2127352 2127972 . - . ID=gene1934;Name=YPZ3_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09700;old_locus_tag=YPZ3_1640 NC_014029.1 Protein Homology CDS 2127352 2127972 . - 0 ID=cds1905;Parent=gene1934;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11 NC_014029.1 RefSeq gene 2127989 2128924 . - . ID=gene1935;Name=YPZ3_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09705;old_locus_tag=YPZ3_1641 NC_014029.1 Protein Homology CDS 2127989 2128924 . - 0 ID=cds1906;Parent=gene1935;Dbxref=Genbank:WP_002210629.1;Name=WP_002210629.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_002210629.1;transl_table=11 NC_014029.1 RefSeq gene 2129005 2129133 . + . ID=gene1936;Name=YPZ3_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09710 NC_014029.1 Protein Homology CDS 2129005 2129133 . + 0 ID=cds1907;Parent=gene1936;Dbxref=Genbank:WP_002215982.1;Name=WP_002215982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215982.1;transl_table=11 NC_014029.1 RefSeq gene 2129162 2129224 . + . ID=gene1937;Name=YPZ3_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09715 NC_014029.1 Protein Homology CDS 2129162 2129224 . + 0 ID=cds1908;Parent=gene1937;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11 NC_014029.1 RefSeq gene 2129343 2130905 . + . ID=gene1938;Name=YPZ3_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09720;old_locus_tag=YPZ3_1642 NC_014029.1 Protein Homology CDS 2129343 2130905 . + 0 ID=cds1909;Parent=gene1938;Dbxref=Genbank:WP_002228454.1;Name=WP_002228454.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase subunit I;protein_id=WP_002228454.1;transl_table=11 NC_014029.1 RefSeq gene 2130905 2131483 . + . ID=gene1939;Name=YPZ3_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09725;old_locus_tag=YPZ3_1643 NC_014029.1 Protein Homology CDS 2130905 2131483 . + 0 ID=cds1910;Parent=gene1939;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11 NC_014029.1 RefSeq gene 2131498 2132496 . + . ID=gene1940;Name=YPZ3_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09730;old_locus_tag=YPZ3_1644 NC_014029.1 Protein Homology CDS 2131498 2132496 . + 0 ID=cds1911;Parent=gene1940;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11 NC_014029.1 RefSeq gene 2132500 2133927 . + . ID=gene1941;Name=YPZ3_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09735;old_locus_tag=YPZ3_1645 NC_014029.1 Protein Homology CDS 2132500 2133927 . + 0 ID=cds1912;Parent=gene1941;Dbxref=Genbank:WP_002210632.1;Name=WP_002210632.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=tryptophan biosynthesis protein TrpCF;protein_id=WP_002210632.1;transl_table=11 NC_014029.1 RefSeq gene 2134084 2135274 . + . ID=gene1942;Name=YPZ3_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09740;old_locus_tag=YPZ3_1646 NC_014029.1 Protein Homology CDS 2134084 2135274 . + 0 ID=cds1913;Parent=gene1942;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NC_014029.1 RefSeq gene 2135274 2136080 . + . ID=gene1943;Name=YPZ3_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09745;old_locus_tag=YPZ3_1647 NC_014029.1 Protein Homology CDS 2135274 2136080 . + 0 ID=cds1914;Parent=gene1943;Dbxref=Genbank:WP_002210634.1;Name=WP_002210634.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_002210634.1;transl_table=11 NC_014029.1 RefSeq gene 2136423 2136737 . + . ID=gene1944;Name=YPZ3_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09750;old_locus_tag=YPZ3_1648 NC_014029.1 Protein Homology CDS 2136423 2136737 . + 0 ID=cds1915;Parent=gene1944;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11 NC_014029.1 RefSeq gene 2136884 2137531 . - . ID=gene1945;Name=YPZ3_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09755;old_locus_tag=YPZ3_1649 NC_014029.1 Protein Homology CDS 2136884 2137531 . - 0 ID=cds1916;Parent=gene1945;Dbxref=Genbank:WP_011055515.1;Name=WP_011055515.1;Note=receptor for colicin S4;gbkey=CDS;product=outer membrane protein W;protein_id=WP_011055515.1;transl_table=11 NC_014029.1 RefSeq gene 2137628 2137843 . - . ID=gene1946;Name=YPZ3_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09760 NC_014029.1 Protein Homology CDS 2137628 2137843 . - 0 ID=cds1917;Parent=gene1946;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NC_014029.1 RefSeq gene 2138005 2138775 . + . ID=gene1947;Name=YPZ3_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09765;old_locus_tag=YPZ3_1650 NC_014029.1 Protein Homology CDS 2138005 2138775 . + 0 ID=cds1918;Parent=gene1947;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11 NC_014029.1 RefSeq gene 2138896 2139516 . - . ID=gene1948;Name=YPZ3_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09770;old_locus_tag=YPZ3_1651 NC_014029.1 Protein Homology CDS 2138896 2139516 . - 0 ID=cds1919;Parent=gene1948;Dbxref=Genbank:WP_002215979.1;Name=WP_002215979.1;gbkey=CDS;product=sulfate permease;protein_id=WP_002215979.1;transl_table=11 NC_014029.1 RefSeq gene 2139548 2140630 . - . ID=gene1949;Name=YPZ3_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09775;old_locus_tag=YPZ3_1652 NC_014029.1 Protein Homology CDS 2139548 2140630 . - 0 ID=cds1920;Parent=gene1949;Dbxref=Genbank:WP_002215978.1;Name=WP_002215978.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_002215978.1;transl_table=11 NC_014029.1 RefSeq gene 2140861 2141403 . + . ID=gene1950;Name=YPZ3_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09780;old_locus_tag=YPZ3_1653 NC_014029.1 Protein Homology CDS 2140861 2141403 . + 0 ID=cds1921;Parent=gene1950;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11 NC_014029.1 RefSeq gene 2141483 2141932 . + . ID=gene1951;Name=YPZ3_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09785;old_locus_tag=YPZ3_1654 NC_014029.1 Protein Homology CDS 2141483 2141932 . + 0 ID=cds1922;Parent=gene1951;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2142006 2143325 . + . ID=id150;gbkey=repeat_region NC_014029.1 RefSeq gene 2142080 2143288 . + . ID=gene1952;Name=YPZ3_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09790;old_locus_tag=YPZ3_1655 NC_014029.1 Protein Homology CDS 2142080 2143288 . + 0 ID=cds1923;Parent=gene1952;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2143324 2144082 . - . ID=gene1953;Name=YPZ3_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09795;old_locus_tag=YPZ3_1656 NC_014029.1 Protein Homology CDS 2143324 2144082 . - 0 ID=cds1924;Parent=gene1953;Dbxref=Genbank:WP_002210642.1;Name=WP_002210642.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002210642.1;transl_table=11 NC_014029.1 RefSeq gene 2144383 2144679 . + . ID=gene1954;Name=YPZ3_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09800 NC_014029.1 Protein Homology CDS 2144383 2144679 . + 0 ID=cds1925;Parent=gene1954;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11 NC_014029.1 RefSeq gene 2144902 2145147 . + . ID=gene1955;Name=YPZ3_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09805 NC_014029.1 Protein Homology CDS 2144902 2145147 . + 0 ID=cds1926;Parent=gene1955;Dbxref=Genbank:WP_002217646.1;Name=WP_002217646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217646.1;transl_table=11 NC_014029.1 RefSeq gene 2145263 2145526 . - . ID=gene1956;Name=YPZ3_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09810 NC_014029.1 Protein Homology CDS 2145263 2145526 . - 0 ID=cds1927;Parent=gene1956;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NC_014029.1 RefSeq gene 2145747 2146286 . - . ID=gene1957;Name=YPZ3_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09815;old_locus_tag=YPZ3_1657 NC_014029.1 Protein Homology CDS 2145747 2146286 . - 0 ID=cds1928;Parent=gene1957;Dbxref=Genbank:WP_002210646.1;Name=WP_002210646.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002210646.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2147024 2147198 . + . ID=id151;gbkey=repeat_region NC_014029.1 RefSeq gene 2147333 2148793 . + . ID=gene1958;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YPZ3_RS09820;old_locus_tag=YPZ3_1658 NC_014029.1 Protein Homology CDS 2147333 2148793 . + 0 ID=cds1929;Parent=gene1958;Dbxref=Genbank:WP_002210648.1;Name=WP_002210648.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_002210648.1;transl_table=11 NC_014029.1 RefSeq gene 2148958 2149281 . + . ID=gene1959;Name=YPZ3_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09825;old_locus_tag=YPZ3_1659 NC_014029.1 Protein Homology CDS 2148958 2149281 . + 0 ID=cds1930;Parent=gene1959;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NC_014029.1 RefSeq gene 2149580 2149795 . - . ID=gene1960;Name=YPZ3_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09830 NC_014029.1 Protein Homology CDS 2149580 2149795 . - 0 ID=cds1931;Parent=gene1960;Dbxref=Genbank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NC_014029.1 RefSeq gene 2150092 2150307 . + . ID=gene1961;Name=YPZ3_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09835 NC_014029.1 GeneMarkS+ CDS 2150092 2150307 . + 0 ID=cds1932;Parent=gene1961;Dbxref=Genbank:WP_015683825.1;Name=WP_015683825.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683825.1;transl_table=11 NC_014029.1 RefSeq gene 2150356 2151357 . - . ID=gene1962;Name=YPZ3_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09840;old_locus_tag=YPZ3_1660 NC_014029.1 Protein Homology CDS 2150356 2151357 . - 0 ID=cds1933;Parent=gene1962;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11 NC_014029.1 RefSeq gene 2151354 2152355 . - . ID=gene1963;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YPZ3_RS09845;old_locus_tag=YPZ3_1661 NC_014029.1 Protein Homology CDS 2151354 2152355 . - 0 ID=cds1934;Parent=gene1963;Dbxref=Genbank:WP_002210652.1;Name=WP_002210652.1;gbkey=CDS;gene=oppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210652.1;transl_table=11 NC_014029.1 RefSeq gene 2152367 2153275 . - . ID=gene1964;Name=YPZ3_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09850;old_locus_tag=YPZ3_1662 NC_014029.1 Protein Homology CDS 2152367 2153275 . - 0 ID=cds1935;Parent=gene1964;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11 NC_014029.1 RefSeq gene 2153291 2154211 . - . ID=gene1965;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YPZ3_RS09855;old_locus_tag=YPZ3_1663 NC_014029.1 Protein Homology CDS 2153291 2154211 . - 0 ID=cds1936;Parent=gene1965;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11 NC_014029.1 RefSeq gene 2154298 2155935 . - . ID=gene1966;Name=YPZ3_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09860;old_locus_tag=YPZ3_1664 NC_014029.1 Protein Homology CDS 2154298 2155935 . - 0 ID=cds1937;Parent=gene1966;Dbxref=Genbank:WP_002218177.1;Name=WP_002218177.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002218177.1;transl_table=11 NC_014029.1 RefSeq gene 2156773 2157417 . - . ID=gene1967;Name=YPZ3_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09865;old_locus_tag=YPZ3_1665 NC_014029.1 Protein Homology CDS 2156773 2157417 . - 0 ID=cds1938;Parent=gene1967;Dbxref=Genbank:WP_002210656.1;Name=WP_002210656.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210656.1;transl_table=11 NC_014029.1 RefSeq gene 2158224 2160899 . + . ID=gene1968;Name=YPZ3_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09870;old_locus_tag=YPZ3_1666 NC_014029.1 Protein Homology CDS 2158224 2160899 . + 0 ID=cds1939;Parent=gene1968;Dbxref=Genbank:WP_002210657.1;Name=WP_002210657.1;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_002210657.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2161346 2163310 . + . ID=id152;gbkey=repeat_region NC_014029.1 RefSeq gene 2161439 2162461 . + . ID=gene1969;Name=YPZ3_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09875;old_locus_tag=YPZ3_1667 NC_014029.1 Protein Homology CDS 2161439 2162461 . + 0 ID=cds1940;Parent=gene1969;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 2162461 2163240 . + . ID=gene1970;Name=YPZ3_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09880;old_locus_tag=YPZ3_1668 NC_014029.1 Protein Homology CDS 2162461 2163240 . + 0 ID=cds1941;Parent=gene1970;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 2163609 2164199 . - . ID=gene1971;Name=YPZ3_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09885;old_locus_tag=YPZ3_1669 NC_014029.1 Protein Homology CDS 2163609 2164199 . - 0 ID=cds1942;Parent=gene1971;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NC_014029.1 RefSeq gene 2164949 2165347 . + . ID=gene1972;Name=YPZ3_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09890;old_locus_tag=YPZ3_1670 NC_014029.1 Protein Homology CDS 2164949 2165347 . + 0 ID=cds1943;Parent=gene1972;Dbxref=Genbank:WP_002210661.1;Name=WP_002210661.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210661.1;transl_table=11 NC_014029.1 RefSeq gene 2165782 2167128 . - . ID=gene1973;Name=YPZ3_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09895;old_locus_tag=YPZ3_1671 NC_014029.1 Protein Homology CDS 2165782 2167128 . - 0 ID=cds1944;Parent=gene1973;Dbxref=Genbank:WP_002210664.1;Name=WP_002210664.1;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_002210664.1;transl_table=11 NC_014029.1 RefSeq gene 2167435 2168451 . - . ID=gene1974;Name=YPZ3_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09900;old_locus_tag=YPZ3_1672 NC_014029.1 Protein Homology CDS 2167435 2168451 . - 0 ID=cds1945;Parent=gene1974;Dbxref=Genbank:WP_002210665.1;Name=WP_002210665.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210665.1;transl_table=11 NC_014029.1 RefSeq gene 2169785 2170249 . + . ID=gene1975;Name=YPZ3_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09905;old_locus_tag=YPZ3_1673 NC_014029.1 Protein Homology CDS 2169785 2170249 . + 0 ID=cds1946;Parent=gene1975;Dbxref=Genbank:WP_002210666.1;Name=WP_002210666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210666.1;transl_table=11 NC_014029.1 RefSeq gene 2170333 2171202 . + . ID=gene1976;Name=YPZ3_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09910;old_locus_tag=YPZ3_1674 NC_014029.1 Protein Homology CDS 2170333 2171202 . + 0 ID=cds1947;Parent=gene1976;Dbxref=Genbank:WP_002210667.1;Name=WP_002210667.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_002210667.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2171127 2172446 . + . ID=id153;gbkey=repeat_region NC_014029.1 RefSeq gene 2171165 2172373 . - . ID=gene1977;Name=YPZ3_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09915;old_locus_tag=YPZ3_1675 NC_014029.1 Protein Homology CDS 2171165 2172373 . - 0 ID=cds1948;Parent=gene1977;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2172653 2172737 . + . ID=gene1978;Name=YPZ3_RS09920;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS09920;old_locus_tag=YPZ3_t22 NC_014029.1 tRNAscan-SE tRNA 2172653 2172737 . + . ID=rna27;Parent=gene1978;anticodon=(pos:2172687..2172689);gbkey=tRNA;product=tRNA-Tyr NC_014029.1 tRNAscan-SE exon 2172653 2172737 . + . ID=id154;Parent=rna27;anticodon=(pos:2172687..2172689);gbkey=tRNA;product=tRNA-Tyr NC_014029.1 RefSeq repeat_region 2172719 2173183 . + . ID=id155;gbkey=repeat_region NC_014029.1 RefSeq gene 2173245 2174105 . - . ID=gene1979;Name=YPZ3_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09925;old_locus_tag=YPZ3_1676 NC_014029.1 Protein Homology CDS 2173245 2174105 . - 0 ID=cds1949;Parent=gene1979;Dbxref=Genbank:WP_002211665.1;Name=WP_002211665.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211665.1;transl_table=11 NC_014029.1 RefSeq gene 2174915 2175721 . + . ID=gene1980;Name=YPZ3_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09930;old_locus_tag=YPZ3_1677 NC_014029.1 Protein Homology CDS 2174915 2175721 . + 0 ID=cds1950;Parent=gene1980;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11 NC_014029.1 RefSeq gene 2175819 2176205 . + . ID=gene1981;Name=YPZ3_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09935;old_locus_tag=YPZ3_1678 NC_014029.1 Protein Homology CDS 2175819 2176205 . + 0 ID=cds1951;Parent=gene1981;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11 NC_014029.1 RefSeq gene 2176218 2176508 . - . ID=gene1982;Name=YPZ3_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09940 NC_014029.1 Protein Homology CDS 2176218 2176508 . - 0 ID=cds1952;Parent=gene1982;Dbxref=Genbank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211669.1;transl_table=11 NC_014029.1 RefSeq gene 2176505 2178430 . - . ID=gene1983;Name=YPZ3_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09945;old_locus_tag=YPZ3_1679 NC_014029.1 Protein Homology CDS 2176505 2178430 . - 0 ID=cds1953;Parent=gene1983;Dbxref=Genbank:WP_002211670.1;Name=WP_002211670.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_002211670.1;transl_table=11 NC_014029.1 RefSeq gene 2178492 2179538 . - . ID=gene1984;Name=YPZ3_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09950;old_locus_tag=YPZ3_1680 NC_014029.1 Protein Homology CDS 2178492 2179538 . - 0 ID=cds1954;Parent=gene1984;Dbxref=Genbank:WP_002211671.1;Name=WP_002211671.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_002211671.1;transl_table=11 NC_014029.1 RefSeq gene 2179763 2180314 . - . ID=gene1985;Name=YPZ3_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09955;old_locus_tag=YPZ3_1681 NC_014029.1 Protein Homology CDS 2179763 2180314 . - 0 ID=cds1955;Parent=gene1985;Dbxref=Genbank:WP_002211673.1;Name=WP_002211673.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211673.1;transl_table=11 NC_014029.1 RefSeq gene 2180477 2182327 . + . ID=gene1986;Name=YPZ3_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09960;old_locus_tag=YPZ3_1682 NC_014029.1 Protein Homology CDS 2180477 2182327 . + 0 ID=cds1956;Parent=gene1986;Dbxref=Genbank:WP_002211674.1;Name=WP_002211674.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_002211674.1;transl_table=11 NC_014029.1 RefSeq gene 2182444 2183460 . + . ID=gene1987;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YPZ3_RS09965;old_locus_tag=YPZ3_1683 NC_014029.1 Protein Homology CDS 2182444 2183460 . + 0 ID=cds1957;Parent=gene1987;Dbxref=Genbank:WP_002211675.1;Name=WP_002211675.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_002211675.1;transl_table=11 NC_014029.1 RefSeq gene 2183475 2184122 . + . ID=gene1988;Name=YPZ3_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09970;old_locus_tag=YPZ3_1684 NC_014029.1 Protein Homology CDS 2183475 2184122 . + 0 ID=cds1958;Parent=gene1988;Dbxref=Genbank:WP_002211676.1;Name=WP_002211676.1;gbkey=CDS;product=nicotinamidase/pyrazinamidase;protein_id=WP_002211676.1;transl_table=11 NC_014029.1 RefSeq gene 2184256 2184528 . - . ID=gene1989;Name=YPZ3_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09975 NC_014029.1 Protein Homology CDS 2184256 2184528 . - 0 ID=cds1959;Parent=gene1989;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11 NC_014029.1 RefSeq gene 2184599 2185012 . - . ID=gene1990;Name=YPZ3_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09980;old_locus_tag=YPZ3_1686 NC_014029.1 Protein Homology CDS 2184599 2185012 . - 0 ID=cds1960;Parent=gene1990;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NC_014029.1 RefSeq gene 2185360 2186355 . + . ID=gene1991;Name=YPZ3_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09985;old_locus_tag=YPZ3_1687 NC_014029.1 Protein Homology CDS 2185360 2186355 . + 0 ID=cds1961;Parent=gene1991;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NC_014029.1 RefSeq gene 2186669 2187544 . + . ID=gene1992;Name=YPZ3_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09990;old_locus_tag=YPZ3_1688 NC_014029.1 Protein Homology CDS 2186669 2187544 . + 0 ID=cds1962;Parent=gene1992;Dbxref=Genbank:WP_002211679.1;Name=WP_002211679.1;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;protein_id=WP_002211679.1;transl_table=11 NC_014029.1 RefSeq gene 2187617 2188387 . - . ID=gene1993;Name=YPZ3_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS09995;old_locus_tag=YPZ3_1689 NC_014029.1 Protein Homology CDS 2187617 2188387 . - 0 ID=cds1963;Parent=gene1993;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11 NC_014029.1 RefSeq gene 2188810 2190744 . + . ID=gene1994;Name=YPZ3_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10000;old_locus_tag=YPZ3_1690 NC_014029.1 Protein Homology CDS 2188810 2190744 . + 0 ID=cds1964;Parent=gene1994;Dbxref=Genbank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_002211681.1;transl_table=11 NC_014029.1 RefSeq gene 2190894 2192168 . + . ID=gene1995;Name=YPZ3_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10005;old_locus_tag=YPZ3_1691 NC_014029.1 Protein Homology CDS 2190894 2192168 . + 0 ID=cds1965;Parent=gene1995;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11 NC_014029.1 RefSeq gene 2192276 2193394 . + . ID=gene1996;Name=YPZ3_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10010;old_locus_tag=YPZ3_1692 NC_014029.1 Protein Homology CDS 2192276 2193394 . + 0 ID=cds1966;Parent=gene1996;Dbxref=Genbank:WP_002211683.1;Name=WP_002211683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211683.1;transl_table=11 NC_014029.1 RefSeq gene 2193429 2194334 . - . ID=gene1997;Name=YPZ3_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10015;old_locus_tag=YPZ3_1693 NC_014029.1 Protein Homology CDS 2193429 2194334 . - 0 ID=cds1967;Parent=gene1997;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NC_014029.1 RefSeq gene 2194532 2195401 . + . ID=gene1998;Name=YPZ3_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10020;old_locus_tag=YPZ3_1694 NC_014029.1 Protein Homology CDS 2194532 2195401 . + 0 ID=cds1968;Parent=gene1998;Dbxref=Genbank:WP_002211685.1;Name=WP_002211685.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002211685.1;transl_table=11 NC_014029.1 RefSeq gene 2195666 2196868 . + . ID=gene1999;Name=YPZ3_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10025;old_locus_tag=YPZ3_1695 NC_014029.1 Protein Homology CDS 2195666 2196868 . + 0 ID=cds1969;Parent=gene1999;Dbxref=Genbank:WP_002216508.1;Name=WP_002216508.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002216508.1;transl_table=11 NC_014029.1 RefSeq gene 2196884 2198188 . - . ID=gene2000;Name=YPZ3_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10030;old_locus_tag=YPZ3_1696 NC_014029.1 Protein Homology CDS 2196884 2198188 . - 0 ID=cds1970;Parent=gene2000;Dbxref=Genbank:WP_002211686.1;Name=WP_002211686.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NC_014029.1 RefSeq gene 2198653 2200188 . + . ID=gene2001;Name=YPZ3_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10035;old_locus_tag=YPZ3_1697 NC_014029.1 Protein Homology CDS 2198653 2200188 . + 0 ID=cds1971;Parent=gene2001;Dbxref=Genbank:WP_002211687.1;Name=WP_002211687.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_002211687.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2200235 2200367 . + . ID=id156;gbkey=repeat_region NC_014029.1 RefSeq gene 2200406 2201125 . - . ID=gene2002;Name=YPZ3_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10040;old_locus_tag=YPZ3_1698 NC_014029.1 Protein Homology CDS 2200406 2201125 . - 0 ID=cds1972;Parent=gene2002;Dbxref=Genbank:WP_002211688.1;Name=WP_002211688.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_002211688.1;transl_table=11 NC_014029.1 RefSeq gene 2201369 2202943 . + . ID=gene2003;Name=YPZ3_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10045;old_locus_tag=YPZ3_1699 NC_014029.1 Protein Homology CDS 2201369 2202943 . + 0 ID=cds1973;Parent=gene2003;Dbxref=Genbank:WP_002211689.1;Name=WP_002211689.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_002211689.1;transl_table=11 NC_014029.1 RefSeq gene 2203179 2203709 . + . ID=gene2004;Name=YPZ3_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10050;old_locus_tag=YPZ3_1700 NC_014029.1 Protein Homology CDS 2203179 2203709 . + 0 ID=cds1974;Parent=gene2004;Dbxref=Genbank:WP_002227934.1;Name=WP_002227934.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_002227934.1;transl_table=11 NC_014029.1 RefSeq gene 2204126 2204482 . - . ID=gene2005;Name=YPZ3_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10055;old_locus_tag=YPZ3_1701 NC_014029.1 Protein Homology CDS 2204126 2204482 . - 0 ID=cds1975;Parent=gene2005;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NC_014029.1 RefSeq gene 2205574 2206314 . + . ID=gene2006;Name=YPZ3_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10060;old_locus_tag=YPZ3_1702 NC_014029.1 Protein Homology CDS 2205574 2206314 . + 0 ID=cds1976;Parent=gene2006;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NC_014029.1 RefSeq gene 2206331 2207530 . + . ID=gene2007;Name=YPZ3_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10065;old_locus_tag=YPZ3_1703 NC_014029.1 Protein Homology CDS 2206331 2207530 . + 0 ID=cds1977;Parent=gene2007;Dbxref=Genbank:WP_002211693.1;Name=WP_002211693.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=aminotransferase;protein_id=WP_002211693.1;transl_table=11 NC_014029.1 RefSeq gene 2207534 2208706 . + . ID=gene2008;Name=YPZ3_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10070;old_locus_tag=YPZ3_1704 NC_014029.1 Protein Homology CDS 2207534 2208706 . + 0 ID=cds1978;Parent=gene2008;Dbxref=Genbank:WP_002214492.1;Name=WP_002214492.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2208936 2210257 . + . ID=id157;gbkey=repeat_region NC_014029.1 RefSeq gene 2209011 2210219 . + . ID=gene2009;Name=YPZ3_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10075;old_locus_tag=YPZ3_1705 NC_014029.1 Protein Homology CDS 2209011 2210219 . + 0 ID=cds1979;Parent=gene2009;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2210288 2210443 . - . ID=gene2010;Name=YPZ3_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10080 NC_014029.1 Protein Homology CDS 2210288 2210443 . - 0 ID=cds1980;Parent=gene2010;Dbxref=Genbank:WP_002211694.1;Name=WP_002211694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211694.1;transl_table=11 NC_014029.1 RefSeq gene 2210440 2210859 . - . ID=gene2011;Name=YPZ3_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10085;old_locus_tag=YPZ3_1706 NC_014029.1 Protein Homology CDS 2210440 2210859 . - 0 ID=cds1981;Parent=gene2011;Dbxref=Genbank:WP_002211695.1;Name=WP_002211695.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211695.1;transl_table=11 NC_014029.1 RefSeq gene 2210870 2211787 . - . ID=gene2012;Name=YPZ3_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10090;old_locus_tag=YPZ3_1707 NC_014029.1 Protein Homology CDS 2210870 2211787 . - 0 ID=cds1982;Parent=gene2012;Dbxref=Genbank:WP_002211696.1;Name=WP_002211696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211696.1;transl_table=11 NC_014029.1 RefSeq gene 2211804 2212802 . - . ID=gene2013;Name=YPZ3_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10095;old_locus_tag=YPZ3_1708 NC_014029.1 Protein Homology CDS 2211804 2212802 . - 0 ID=cds1983;Parent=gene2013;Dbxref=Genbank:WP_002211697.1;Name=WP_002211697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211697.1;transl_table=11 NC_014029.1 RefSeq gene 2212802 2216005 . - . ID=gene2014;Name=YPZ3_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10100;old_locus_tag=YPZ3_1709 NC_014029.1 Protein Homology CDS 2212802 2216005 . - 0 ID=cds1984;Parent=gene2014;Dbxref=Genbank:WP_002211698.1;Name=WP_002211698.1;gbkey=CDS;product=host specificity protein;protein_id=WP_002211698.1;transl_table=11 NC_014029.1 RefSeq gene 2216181 2216402 . + . ID=gene2015;Name=YPZ3_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10105 NC_014029.1 Protein Homology CDS 2216181 2216402 . + 0 ID=cds1985;Parent=gene2015;Dbxref=Genbank:WP_002359202.1;Name=WP_002359202.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002359202.1;transl_table=11 NC_014029.1 RefSeq gene 2216371 2216535 . - . ID=gene2016;Name=YPZ3_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10110 NC_014029.1 Protein Homology CDS 2216371 2216535 . - 0 ID=cds1986;Parent=gene2016;Dbxref=Genbank:WP_002211699.1;Name=WP_002211699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211699.1;transl_table=11 NC_014029.1 RefSeq gene 2216577 2217197 . - . ID=gene2017;Name=YPZ3_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10115;old_locus_tag=YPZ3_1710 NC_014029.1 Protein Homology CDS 2216577 2217197 . - 0 ID=cds1987;Parent=gene2017;Dbxref=Genbank:WP_002211700.1;Name=WP_002211700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211700.1;transl_table=11 NC_014029.1 RefSeq gene 2217253 2217468 . - . ID=gene2018;Name=YPZ3_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10120 NC_014029.1 Protein Homology CDS 2217253 2217468 . - 0 ID=cds1988;Parent=gene2018;Dbxref=Genbank:WP_002211701.1;Name=WP_002211701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211701.1;transl_table=11 NC_014029.1 RefSeq gene 2217611 2218162 . - . ID=gene2019;Name=YPZ3_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10125 NC_014029.1 Protein Homology CDS 2217611 2218162 . - 0 ID=cds1989;Parent=gene2019;Dbxref=Genbank:WP_002214482.1;Name=WP_002214482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214482.1;transl_table=11 NC_014029.1 RefSeq gene 2218261 2219268 . - . ID=gene2020;Name=YPZ3_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10130;old_locus_tag=YPZ3_1711 NC_014029.1 Protein Homology CDS 2218261 2219268 . - 0 ID=cds1990;Parent=gene2020;Dbxref=Genbank:WP_002211704.1;Name=WP_002211704.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211704.1;transl_table=11 NC_014029.1 RefSeq gene 2219342 2219509 . - . ID=gene2021;Name=YPZ3_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10135 NC_014029.1 Protein Homology CDS 2219342 2219509 . - 0 ID=cds1991;Parent=gene2021;Dbxref=Genbank:WP_002211705.1;Name=WP_002211705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211705.1;transl_table=11 NC_014029.1 RefSeq gene 2219633 2220064 . + . ID=gene2022;Name=YPZ3_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10140 NC_014029.1 Protein Homology CDS 2219633 2220064 . + 0 ID=cds1992;Parent=gene2022;Dbxref=Genbank:WP_002211706.1;Name=WP_002211706.1;gbkey=CDS;product=Rha family transcriptional regulator;protein_id=WP_002211706.1;transl_table=11 NC_014029.1 RefSeq gene 2220143 2220775 . - . ID=gene2023;Name=YPZ3_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10145;old_locus_tag=YPZ3_1712 NC_014029.1 Protein Homology CDS 2220143 2220775 . - 0 ID=cds1993;Parent=gene2023;Dbxref=Genbank:WP_002211707.1;Name=WP_002211707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211707.1;transl_table=11 NC_014029.1 RefSeq gene 2221036 2221746 . - . ID=gene2024;Name=YPZ3_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10150;old_locus_tag=YPZ3_1713 NC_014029.1 Protein Homology CDS 2221036 2221746 . - 0 ID=cds1994;Parent=gene2024;Dbxref=Genbank:WP_002211708.1;Name=WP_002211708.1;gbkey=CDS;product=peptidase P60;protein_id=WP_002211708.1;transl_table=11 NC_014029.1 RefSeq gene 2221749 2222501 . - . ID=gene2025;Name=YPZ3_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10155;old_locus_tag=YPZ3_1714 NC_014029.1 Protein Homology CDS 2221749 2222501 . - 0 ID=cds1995;Parent=gene2025;Dbxref=Genbank:WP_002211709.1;Name=WP_002211709.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211709.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2222508 2223232 . + . ID=id158;gbkey=repeat_region NC_014029.1 RefSeq gene 2222622 2223080 . - . ID=gene2026;Name=YPZ3_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10160;old_locus_tag=YPZ3_1715 NC_014029.1 Protein Homology CDS 2222622 2223080 . - 0 ID=cds1996;Parent=gene2026;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 2223070 2223225 . - . ID=gene2027;Name=YPZ3_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10165 NC_014029.1 Protein Homology CDS 2223070 2223225 . - 0 ID=cds1997;Parent=gene2027;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 2223385 2223726 . - . ID=gene2028;Name=YPZ3_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10170;old_locus_tag=YPZ3_1716 NC_014029.1 Protein Homology CDS 2223385 2223726 . - 0 ID=cds1998;Parent=gene2028;Dbxref=Genbank:WP_002211710.1;Name=WP_002211710.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211710.1;transl_table=11 NC_014029.1 RefSeq gene 2223729 2227232 . - . ID=gene2029;Name=YPZ3_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10175;old_locus_tag=YPZ3_1717 NC_014029.1 Protein Homology CDS 2223729 2227232 . - 0 ID=cds1999;Parent=gene2029;Dbxref=Genbank:WP_002211711.1;Name=WP_002211711.1;gbkey=CDS;product=tail protein;protein_id=WP_002211711.1;transl_table=11 NC_014029.1 RefSeq gene 2227233 2227454 . - . ID=gene2030;Name=YPZ3_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10180 NC_014029.1 Protein Homology CDS 2227233 2227454 . - 0 ID=cds2000;Parent=gene2030;Dbxref=Genbank:WP_002214476.1;Name=WP_002214476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214476.1;transl_table=11 NC_014029.1 RefSeq gene 2227541 2227852 . - . ID=gene2031;Name=YPZ3_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10185;old_locus_tag=YPZ3_1718 NC_014029.1 Protein Homology CDS 2227541 2227852 . - 0 ID=cds2001;Parent=gene2031;Dbxref=Genbank:WP_002211712.1;Name=WP_002211712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211712.1;transl_table=11 NC_014029.1 RefSeq gene 2227865 2228785 . - . ID=gene2032;Name=YPZ3_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10190;old_locus_tag=YPZ3_1719 NC_014029.1 Protein Homology CDS 2227865 2228785 . - 0 ID=cds2002;Parent=gene2032;Dbxref=Genbank:WP_002211713.1;Name=WP_002211713.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211713.1;transl_table=11 NC_014029.1 RefSeq gene 2228851 2229258 . - . ID=gene2033;Name=YPZ3_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10195;old_locus_tag=YPZ3_1720 NC_014029.1 Protein Homology CDS 2228851 2229258 . - 0 ID=cds2003;Parent=gene2033;Dbxref=Genbank:WP_002211714.1;Name=WP_002211714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211714.1;transl_table=11 NC_014029.1 RefSeq gene 2229255 2229839 . - . ID=gene2034;Name=YPZ3_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10200;old_locus_tag=YPZ3_1721 NC_014029.1 Protein Homology CDS 2229255 2229839 . - 0 ID=cds2004;Parent=gene2034;Dbxref=Genbank:WP_002211715.1;Name=WP_002211715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211715.1;transl_table=11 NC_014029.1 RefSeq gene 2229841 2230191 . - . ID=gene2035;Name=YPZ3_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10205;old_locus_tag=YPZ3_1722 NC_014029.1 Protein Homology CDS 2229841 2230191 . - 0 ID=cds2005;Parent=gene2035;Dbxref=Genbank:WP_002211716.1;Name=WP_002211716.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211716.1;transl_table=11 NC_014029.1 RefSeq gene 2230193 2230447 . - . ID=gene2036;Name=YPZ3_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10210 NC_014029.1 Protein Homology CDS 2230193 2230447 . - 0 ID=cds2006;Parent=gene2036;Dbxref=Genbank:WP_002211717.1;Name=WP_002211717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211717.1;transl_table=11 NC_014029.1 RefSeq gene 2230444 2230926 . - . ID=gene2037;Name=YPZ3_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10215;old_locus_tag=YPZ3_1723 NC_014029.1 Protein Homology CDS 2230444 2230926 . - 0 ID=cds2007;Parent=gene2037;Dbxref=Genbank:WP_002211718.1;Name=WP_002211718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211718.1;transl_table=11 NC_014029.1 RefSeq gene 2230974 2232179 . - . ID=gene2038;Name=YPZ3_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10220;old_locus_tag=YPZ3_1724 NC_014029.1 Protein Homology CDS 2230974 2232179 . - 0 ID=cds2008;Parent=gene2038;Dbxref=Genbank:WP_002211719.1;Name=WP_002211719.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211719.1;transl_table=11 NC_014029.1 RefSeq gene 2232193 2232966 . - . ID=gene2039;Name=YPZ3_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10225;old_locus_tag=YPZ3_1725 NC_014029.1 Protein Homology CDS 2232193 2232966 . - 0 ID=cds2009;Parent=gene2039;Dbxref=Genbank:WP_002211720.1;Name=WP_002211720.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211720.1;transl_table=11 NC_014029.1 RefSeq gene 2233088 2234200 . - . ID=gene2040;Name=YPZ3_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10230;old_locus_tag=YPZ3_1726 NC_014029.1 Protein Homology CDS 2233088 2234200 . - 0 ID=cds2010;Parent=gene2040;Dbxref=Genbank:WP_002211721.1;Name=WP_002211721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211721.1;transl_table=11 NC_014029.1 RefSeq gene 2234201 2234842 . - . ID=gene2041;Name=YPZ3_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10235;old_locus_tag=YPZ3_1727 NC_014029.1 Protein Homology CDS 2234201 2234842 . - 0 ID=cds2011;Parent=gene2041;Dbxref=Genbank:WP_002228446.1;Name=WP_002228446.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228446.1;transl_table=11 NC_014029.1 RefSeq gene 2234861 2235589 . - . ID=gene2042;Name=YPZ3_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10240;old_locus_tag=YPZ3_1728 NC_014029.1 Protein Homology CDS 2234861 2235589 . - 0 ID=cds2012;Parent=gene2042;Dbxref=Genbank:WP_002228445.1;Name=WP_002228445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228445.1;transl_table=11 NC_014029.1 RefSeq gene 2235589 2236563 . - . ID=gene2043;Name=YPZ3_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10245;old_locus_tag=YPZ3_1729 NC_014029.1 Protein Homology CDS 2235589 2236563 . - 0 ID=cds2013;Parent=gene2043;Dbxref=Genbank:WP_002211722.1;Name=WP_002211722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211722.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2236530 2237849 . + . ID=id159;gbkey=repeat_region NC_014029.1 RefSeq gene 2236568 2237776 . - . ID=gene2044;Name=YPZ3_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10250;old_locus_tag=YPZ3_1730 NC_014029.1 Protein Homology CDS 2236568 2237776 . - 0 ID=cds2014;Parent=gene2044;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2237824 2238402 . - . ID=gene2045;Name=YPZ3_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10255 NC_014029.1 Protein Homology CDS 2237824 2238402 . - 0 ID=cds2015;Parent=gene2045;Dbxref=Genbank:WP_002215656.1;Name=WP_002215656.1;gbkey=CDS;product=terminase large subunit;protein_id=WP_002215656.1;transl_table=11 NC_014029.1 RefSeq gene 2238412 2238861 . - . ID=gene2046;Name=YPZ3_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10260;old_locus_tag=YPZ3_1732 NC_014029.1 Protein Homology CDS 2238412 2238861 . - 0 ID=cds2016;Parent=gene2046;Dbxref=Genbank:WP_002211724.1;Name=WP_002211724.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211724.1;transl_table=11 NC_014029.1 RefSeq gene 2238892 2239527 . - . ID=gene2047;Name=YPZ3_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10265;old_locus_tag=YPZ3_1733 NC_014029.1 Protein Homology CDS 2238892 2239527 . - 0 ID=cds2017;Parent=gene2047;Dbxref=Genbank:WP_002211725.1;Name=WP_002211725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211725.1;transl_table=11 NC_014029.1 RefSeq gene 2239984 2240697 . - . ID=gene2048;Name=YPZ3_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10270;old_locus_tag=YPZ3_1734 NC_014029.1 Protein Homology CDS 2239984 2240697 . - 0 ID=cds2018;Parent=gene2048;Dbxref=Genbank:WP_002211727.1;Name=WP_002211727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211727.1;transl_table=11 NC_014029.1 RefSeq gene 2241243 2241701 . - . ID=gene2049;Name=YPZ3_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10275;old_locus_tag=YPZ3_1735 NC_014029.1 Protein Homology CDS 2241243 2241701 . - 0 ID=cds2019;Parent=gene2049;Dbxref=Genbank:WP_002211729.1;Name=WP_002211729.1;gbkey=CDS;product=endopeptidase;protein_id=WP_002211729.1;transl_table=11 NC_014029.1 RefSeq gene 2241686 2242198 . - . ID=gene2050;Name=YPZ3_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10280;old_locus_tag=YPZ3_1736 NC_014029.1 Protein Homology CDS 2241686 2242198 . - 0 ID=cds2020;Parent=gene2050;Dbxref=Genbank:WP_002211730.1;Name=WP_002211730.1;gbkey=CDS;product=glycoside hydrolase;protein_id=WP_002211730.1;transl_table=11 NC_014029.1 RefSeq gene 2242229 2242426 . - . ID=gene2051;Name=YPZ3_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10285 NC_014029.1 Protein Homology CDS 2242229 2242426 . - 0 ID=cds2021;Parent=gene2051;Dbxref=Genbank:WP_002430108.1;Name=WP_002430108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430108.1;transl_table=11 NC_014029.1 RefSeq gene 2242672 2242947 . + . ID=gene2052;Name=YPZ3_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10290 NC_014029.1 Protein Homology CDS 2242672 2242947 . + 0 ID=cds2022;Parent=gene2052;Dbxref=Genbank:WP_002215644.1;Name=WP_002215644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215644.1;transl_table=11 NC_014029.1 RefSeq gene 2242944 2243153 . - . ID=gene2053;Name=YPZ3_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10295 NC_014029.1 Protein Homology CDS 2242944 2243153 . - 0 ID=cds2023;Parent=gene2053;Dbxref=Genbank:WP_002211731.1;Name=WP_002211731.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211731.1;transl_table=11 NC_014029.1 RefSeq gene 2243316 2243492 . + . ID=gene2054;Name=YPZ3_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10300 NC_014029.1 Protein Homology CDS 2243316 2243492 . + 0 ID=cds2024;Parent=gene2054;Dbxref=Genbank:WP_002393183.1;Name=WP_002393183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002393183.1;transl_table=11 NC_014029.1 RefSeq gene 2243577 2244140 . - . ID=gene2055;Name=YPZ3_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10305;old_locus_tag=YPZ3_1737 NC_014029.1 Protein Homology CDS 2243577 2244140 . - 0 ID=cds2025;Parent=gene2055;Dbxref=Genbank:WP_002211732.1;Name=WP_002211732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211732.1;transl_table=11 NC_014029.1 RefSeq gene 2244189 2244407 . - . ID=gene2056;Name=YPZ3_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10310 NC_014029.1 Protein Homology CDS 2244189 2244407 . - 0 ID=cds2026;Parent=gene2056;Dbxref=Genbank:WP_002215638.1;Name=WP_002215638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215638.1;transl_table=11 NC_014029.1 RefSeq gene 2244411 2244800 . - . ID=gene2057;Name=YPZ3_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10315 NC_014029.1 Protein Homology CDS 2244411 2244800 . - 0 ID=cds2027;Parent=gene2057;Dbxref=Genbank:WP_002215636.1;Name=WP_002215636.1;gbkey=CDS;product=antitermination protein;protein_id=WP_002215636.1;transl_table=11 NC_014029.1 RefSeq gene 2244801 2245406 . - . ID=gene2058;Name=YPZ3_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10320;old_locus_tag=YPZ3_1738 NC_014029.1 Protein Homology CDS 2244801 2245406 . - 0 ID=cds2028;Parent=gene2058;Dbxref=Genbank:WP_002211735.1;Name=WP_002211735.1;gbkey=CDS;product=protein ninG;protein_id=WP_002211735.1;transl_table=11 NC_014029.1 RefSeq gene 2245480 2245926 . - . ID=gene2059;Name=YPZ3_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10325;old_locus_tag=YPZ3_1739 NC_014029.1 Protein Homology CDS 2245480 2245926 . - 0 ID=cds2029;Parent=gene2059;Dbxref=Genbank:WP_002211736.1;Name=WP_002211736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211736.1;transl_table=11 NC_014029.1 RefSeq gene 2245953 2246651 . + . ID=gene2060;Name=YPZ3_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10330;old_locus_tag=YPZ3_1740 NC_014029.1 Protein Homology CDS 2245953 2246651 . + 0 ID=cds2030;Parent=gene2060;Dbxref=Genbank:WP_002211737.1;Name=WP_002211737.1;gbkey=CDS;product=DNA methyltransferase;protein_id=WP_002211737.1;transl_table=11 NC_014029.1 RefSeq gene 2246951 2247211 . + . ID=gene2061;Name=YPZ3_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10335 NC_014029.1 Protein Homology CDS 2246951 2247211 . + 0 ID=cds2031;Parent=gene2061;Dbxref=Genbank:WP_002215632.1;Name=WP_002215632.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002215632.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2247311 2249268 . + . ID=id160;gbkey=repeat_region NC_014029.1 RefSeq gene 2247379 2248158 . - . ID=gene2062;Name=YPZ3_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10340;old_locus_tag=YPZ3_1741 NC_014029.1 Protein Homology CDS 2247379 2248158 . - 0 ID=cds2032;Parent=gene2062;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 2248158 2249180 . - . ID=gene2063;Name=YPZ3_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10345;old_locus_tag=YPZ3_1742 NC_014029.1 Protein Homology CDS 2248158 2249180 . - 0 ID=cds2033;Parent=gene2063;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 2249250 2250488 . + . ID=gene2064;Name=YPZ3_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10350;old_locus_tag=YPZ3_1743 NC_014029.1 Protein Homology CDS 2249250 2250488 . + 0 ID=cds2034;Parent=gene2064;Dbxref=Genbank:WP_002211738.1;Name=WP_002211738.1;gbkey=CDS;product=integrase;protein_id=WP_002211738.1;transl_table=11 NC_014029.1 RefSeq gene 2250515 2250961 . - . ID=gene2065;Name=YPZ3_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10355;old_locus_tag=YPZ3_1744 NC_014029.1 Protein Homology CDS 2250515 2250961 . - 0 ID=cds2035;Parent=gene2065;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11 NC_014029.1 RefSeq gene 2251064 2251720 . - . ID=gene2066;Name=YPZ3_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10360;old_locus_tag=YPZ3_1745 NC_014029.1 Protein Homology CDS 2251064 2251720 . - 0 ID=cds2036;Parent=gene2066;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11 NC_014029.1 RefSeq gene 2251791 2252876 . - . ID=gene2067;Name=YPZ3_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10365;old_locus_tag=YPZ3_1746 NC_014029.1 Protein Homology CDS 2251791 2252876 . - 0 ID=cds2037;Parent=gene2067;Dbxref=Genbank:WP_002215627.1;Name=WP_002215627.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215627.1;transl_table=11 NC_014029.1 RefSeq gene 2253017 2253289 . - . ID=gene2068;Name=YPZ3_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10370 NC_014029.1 Protein Homology CDS 2253017 2253289 . - 0 ID=cds2038;Parent=gene2068;Dbxref=Genbank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211743.1;transl_table=11 NC_014029.1 RefSeq gene 2254010 2254696 . + . ID=gene2069;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YPZ3_RS10375;old_locus_tag=YPZ3_1747 NC_014029.1 Protein Homology CDS 2254010 2254696 . + 0 ID=cds2039;Parent=gene2069;Dbxref=Genbank:WP_002220631.1;Name=WP_002220631.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11 NC_014029.1 RefSeq gene 2254721 2255533 . + . ID=gene2070;Name=YPZ3_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10380;old_locus_tag=YPZ3_1748 NC_014029.1 Protein Homology CDS 2254721 2255533 . + 0 ID=cds2040;Parent=gene2070;Dbxref=Genbank:WP_002211179.1;Name=WP_002211179.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_002211179.1;transl_table=11 NC_014029.1 RefSeq gene 2255537 2255806 . + . ID=gene2071;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YPZ3_RS10385 NC_014029.1 Protein Homology CDS 2255537 2255806 . + 0 ID=cds2041;Parent=gene2071;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11 NC_014029.1 RefSeq gene 2256043 2257164 . - . ID=gene2072;Name=YPZ3_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10390;old_locus_tag=YPZ3_1749 NC_014029.1 Protein Homology CDS 2256043 2257164 . - 0 ID=cds2042;Parent=gene2072;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NC_014029.1 RefSeq gene 2257324 2259012 . - . ID=gene2073;Name=YPZ3_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10395;old_locus_tag=YPZ3_1750 NC_014029.1 Protein Homology CDS 2257324 2259012 . - 0 ID=cds2043;Parent=gene2073;Dbxref=Genbank:WP_002211182.1;Name=WP_002211182.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain-fatty-acid--CoA ligase;protein_id=WP_002211182.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2259503 2259618 . + . ID=id161;gbkey=repeat_region NC_014029.1 RefSeq gene 2259655 2260260 . - . ID=gene2074;Name=YPZ3_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10400;old_locus_tag=YPZ3_1751 NC_014029.1 Protein Homology CDS 2259655 2260260 . - 0 ID=cds2044;Parent=gene2074;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11 NC_014029.1 RefSeq gene 2260397 2261095 . - . ID=gene2075;Name=YPZ3_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10405;old_locus_tag=YPZ3_1752 NC_014029.1 Protein Homology CDS 2260397 2261095 . - 0 ID=cds2045;Parent=gene2075;Dbxref=Genbank:WP_002211184.1;Name=WP_002211184.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_002211184.1;transl_table=11 NC_014029.1 RefSeq gene 2261167 2263071 . - . ID=gene2076;Name=YPZ3_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10410;old_locus_tag=YPZ3_1753 NC_014029.1 Protein Homology CDS 2261167 2263071 . - 0 ID=cds2046;Parent=gene2076;Dbxref=Genbank:WP_002211185.1;Name=WP_002211185.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_002211185.1;transl_table=11 NC_014029.1 RefSeq gene 2263202 2263546 . + . ID=gene2077;Name=YPZ3_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10415;old_locus_tag=YPZ3_1754 NC_014029.1 Protein Homology CDS 2263202 2263546 . + 0 ID=cds2047;Parent=gene2077;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11 NC_014029.1 RefSeq gene 2263678 2264007 . - . ID=gene2078;Name=YPZ3_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10420;old_locus_tag=YPZ3_1755 NC_014029.1 Protein Homology CDS 2263678 2264007 . - 0 ID=cds2048;Parent=gene2078;Dbxref=Genbank:WP_002211187.1;Name=WP_002211187.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_002211187.1;transl_table=11 NC_014029.1 RefSeq gene 2263994 2264437 . - . ID=gene2079;Name=YPZ3_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10425;old_locus_tag=YPZ3_1756 NC_014029.1 Protein Homology CDS 2263994 2264437 . - 0 ID=cds2049;Parent=gene2079;Dbxref=Genbank:WP_002211188.1;Name=WP_002211188.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_002211188.1;transl_table=11 NC_014029.1 RefSeq gene 2265152 2265793 . - . ID=gene2080;Name=YPZ3_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10430;old_locus_tag=YPZ3_1757 NC_014029.1 Protein Homology CDS 2265152 2265793 . - 0 ID=cds2050;Parent=gene2080;Dbxref=Genbank:WP_002211190.1;Name=WP_002211190.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_002211190.1;transl_table=11 NC_014029.1 RefSeq gene 2266035 2267519 . - . ID=gene2081;Name=YPZ3_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10435;old_locus_tag=YPZ3_1758 NC_014029.1 Protein Homology CDS 2266035 2267519 . - 0 ID=cds2051;Parent=gene2081;Dbxref=Genbank:WP_002211191.1;Name=WP_002211191.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_002211191.1;transl_table=11 NC_014029.1 RefSeq gene 2267872 2268741 . + . ID=gene2082;Name=YPZ3_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10440;old_locus_tag=YPZ3_1759 NC_014029.1 Protein Homology CDS 2267872 2268741 . + 0 ID=cds2052;Parent=gene2082;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NC_014029.1 RefSeq gene 2269071 2270513 . + . ID=gene2083;Name=YPZ3_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10445;old_locus_tag=YPZ3_1760 NC_014029.1 Protein Homology CDS 2269071 2270513 . + 0 ID=cds2053;Parent=gene2083;Dbxref=Genbank:WP_002211193.1;Name=WP_002211193.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2270562 2270738 . + . ID=id162;gbkey=repeat_region NC_014029.1 RefSeq gene 2270858 2271820 . - . ID=gene2084;Name=YPZ3_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10450;old_locus_tag=YPZ3_1761 NC_014029.1 Protein Homology CDS 2270858 2271820 . - 0 ID=cds2054;Parent=gene2084;Dbxref=Genbank:WP_002211194.1;Name=WP_002211194.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_002211194.1;transl_table=11 NC_014029.1 RefSeq gene 2272087 2273403 . - . ID=gene2085;Name=YPZ3_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10455;old_locus_tag=YPZ3_1762 NC_014029.1 Protein Homology CDS 2272087 2273403 . - 0 ID=cds2055;Parent=gene2085;Dbxref=Genbank:WP_002228437.1;Name=WP_002228437.1;gbkey=CDS;product=peptidase;protein_id=WP_002228437.1;transl_table=11 NC_014029.1 RefSeq gene 2273424 2274380 . - . ID=gene2086;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=YPZ3_RS10460;old_locus_tag=YPZ3_1763 NC_014029.1 Protein Homology CDS 2273424 2274380 . - 0 ID=cds2056;Parent=gene2086;Dbxref=Genbank:WP_002227944.1;Name=WP_002227944.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_002227944.1;transl_table=11 NC_014029.1 RefSeq gene 2274456 2275214 . + . ID=gene2087;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=YPZ3_RS10465;old_locus_tag=YPZ3_1764 NC_014029.1 Protein Homology CDS 2274456 2275214 . + 0 ID=cds2057;Parent=gene2087;Dbxref=Genbank:WP_002228434.1;Name=WP_002228434.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_002228434.1;transl_table=11 NC_014029.1 RefSeq gene 2275211 2275996 . + . ID=gene2088;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=YPZ3_RS10470;old_locus_tag=YPZ3_1765 NC_014029.1 Protein Homology CDS 2275211 2275996 . + 0 ID=cds2058;Parent=gene2088;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11 NC_014029.1 RefSeq gene 2276051 2277055 . - . ID=gene2089;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YPZ3_RS10475;old_locus_tag=YPZ3_1766 NC_014029.1 Protein Homology CDS 2276051 2277055 . - 0 ID=cds2059;Parent=gene2089;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NC_014029.1 RefSeq gene 2277217 2277831 . - . ID=gene2090;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YPZ3_RS10480;old_locus_tag=YPZ3_1767 NC_014029.1 Protein Homology CDS 2277217 2277831 . - 0 ID=cds2060;Parent=gene2090;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11 NC_014029.1 RefSeq gene 2278114 2278635 . - . ID=gene2091;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YPZ3_RS10485;old_locus_tag=YPZ3_1768 NC_014029.1 Protein Homology CDS 2278114 2278635 . - 0 ID=cds2061;Parent=gene2091;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NC_014029.1 RefSeq gene 2278844 2279587 . - . ID=gene2092;Name=YPZ3_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10490;old_locus_tag=YPZ3_1769 NC_014029.1 Protein Homology CDS 2278844 2279587 . - 0 ID=cds2062;Parent=gene2092;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NC_014029.1 RefSeq gene 2279645 2280088 . - . ID=gene2093;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YPZ3_RS10495;old_locus_tag=YPZ3_1770 NC_014029.1 Protein Homology CDS 2279645 2280088 . - 0 ID=cds2063;Parent=gene2093;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11 NC_014029.1 RefSeq gene 2280088 2281884 . - . ID=gene2094;Name=YPZ3_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10500;old_locus_tag=YPZ3_1771 NC_014029.1 Protein Homology CDS 2280088 2281884 . - 0 ID=cds2064;Parent=gene2094;Dbxref=Genbank:WP_002211204.1;Name=WP_002211204.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2282470 2282935 . + . ID=id163;gbkey=repeat_region NC_014029.1 RefSeq gene 2282942 2283757 . + . ID=gene2095;Name=YPZ3_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10505;old_locus_tag=YPZ3_1772 NC_014029.1 Protein Homology CDS 2282942 2283757 . + 0 ID=cds2065;Parent=gene2095;Dbxref=Genbank:WP_002211205.1;Name=WP_002211205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211205.1;transl_table=11 NC_014029.1 RefSeq gene 2283937 2284332 . + . ID=gene2096;Name=YPZ3_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10510;old_locus_tag=YPZ3_1773 NC_014029.1 Protein Homology CDS 2283937 2284332 . + 0 ID=cds2066;Parent=gene2096;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11 NC_014029.1 RefSeq gene 2284523 2285326 . + . ID=gene2097;Name=YPZ3_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10515;old_locus_tag=YPZ3_1774 NC_014029.1 Protein Homology CDS 2284523 2285326 . + 0 ID=cds2067;Parent=gene2097;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11 NC_014029.1 RefSeq gene 2285323 2286294 . + . ID=gene2098;Name=YPZ3_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10520;old_locus_tag=YPZ3_1775 NC_014029.1 Protein Homology CDS 2285323 2286294 . + 0 ID=cds2068;Parent=gene2098;Dbxref=Genbank:WP_002211208.1;Name=WP_002211208.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_002211208.1;transl_table=11 NC_014029.1 RefSeq gene 2286487 2287251 . - . ID=gene2099;Name=YPZ3_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10525;old_locus_tag=YPZ3_1776 NC_014029.1 Protein Homology CDS 2286487 2287251 . - 0 ID=cds2069;Parent=gene2099;Dbxref=Genbank:WP_002211209.1;Name=WP_002211209.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_002211209.1;transl_table=11 NC_014029.1 RefSeq gene 2287483 2288058 . - . ID=gene2100;Name=YPZ3_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10530;old_locus_tag=YPZ3_1777 NC_014029.1 Protein Homology CDS 2287483 2288058 . - 0 ID=cds2070;Parent=gene2100;Dbxref=Genbank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211210.1;transl_table=11 NC_014029.1 RefSeq gene 2288685 2290415 . + . ID=gene2101;Name=YPZ3_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10535;old_locus_tag=YPZ3_1778 NC_014029.1 Protein Homology CDS 2288685 2290415 . + 0 ID=cds2071;Parent=gene2101;Dbxref=Genbank:WP_002211212.1;Name=WP_002211212.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_002211212.1;transl_table=11 NC_014029.1 RefSeq gene 2290646 2295121 . - . ID=gene2102;Name=YPZ3_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10540;old_locus_tag=YPZ3_1779 NC_014029.1 Protein Homology CDS 2290646 2295121 . - 0 ID=cds2072;Parent=gene2102;Dbxref=Genbank:WP_002369860.1;Name=WP_002369860.1;gbkey=CDS;product=hemolysin;protein_id=WP_002369860.1;transl_table=11 NC_014029.1 RefSeq gene 2295406 2297067 . - . ID=gene2103;Name=YPZ3_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10545;old_locus_tag=YPZ3_1780 NC_014029.1 Protein Homology CDS 2295406 2297067 . - 0 ID=cds2073;Parent=gene2103;Dbxref=Genbank:WP_002211213.1;Name=WP_002211213.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002211213.1;transl_table=11 NC_014029.1 RefSeq gene 2297547 2299082 . - . ID=gene2104;Name=YPZ3_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10550;old_locus_tag=YPZ3_1781 NC_014029.1 Protein Homology CDS 2297547 2299082 . - 0 ID=cds2074;Parent=gene2104;Dbxref=Genbank:WP_002211214.1;Name=WP_002211214.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211214.1;transl_table=11 NC_014029.1 RefSeq gene 2299349 2300260 . - . ID=gene2105;Name=YPZ3_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10555 NC_014029.1 Protein Homology CDS 2299349 2300260 . - 0 ID=cds2075;Parent=gene2105;Dbxref=Genbank:WP_002354211.1;Name=WP_002354211.1;gbkey=CDS;product=virulence factor MviM;protein_id=WP_002354211.1;transl_table=11 NC_014029.1 RefSeq gene 2300967 2301551 . - . ID=gene2106;Name=YPZ3_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10560;old_locus_tag=YPZ3_1783 NC_014029.1 Protein Homology CDS 2300967 2301551 . - 0 ID=cds2076;Parent=gene2106;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NC_014029.1 RefSeq gene 2301845 2303050 . + . ID=gene2107;Name=YPZ3_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10565;old_locus_tag=YPZ3_1784 NC_014029.1 Protein Homology CDS 2301845 2303050 . + 0 ID=cds2077;Parent=gene2107;Dbxref=Genbank:WP_002211217.1;Name=WP_002211217.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_002211217.1;transl_table=11 NC_014029.1 RefSeq gene 2303445 2304008 . + . ID=gene2108;Name=YPZ3_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10570;old_locus_tag=YPZ3_1785 NC_014029.1 Protein Homology CDS 2303445 2304008 . + 0 ID=cds2078;Parent=gene2108;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2304070 2304408 . + . ID=id164;gbkey=repeat_region NC_014029.1 RefSeq gene 2304462 2305022 . - . ID=gene2109;Name=YPZ3_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10575;old_locus_tag=YPZ3_1786 NC_014029.1 Protein Homology CDS 2304462 2305022 . - 0 ID=cds2079;Parent=gene2109;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NC_014029.1 RefSeq gene 2305059 2305796 . - . ID=gene2110;Name=YPZ3_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10580;old_locus_tag=YPZ3_1787 NC_014029.1 Protein Homology CDS 2305059 2305796 . - 0 ID=cds2080;Parent=gene2110;Dbxref=Genbank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NC_014029.1 RefSeq gene 2306085 2306174 . + . ID=gene2111;Name=YPZ3_RS10585;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS10585;old_locus_tag=YPZ3_t23 NC_014029.1 tRNAscan-SE tRNA 2306085 2306174 . + . ID=rna28;Parent=gene2111;anticodon=(pos:2306119..2306121);gbkey=tRNA;product=tRNA-Ser NC_014029.1 tRNAscan-SE exon 2306085 2306174 . + . ID=id165;Parent=rna28;anticodon=(pos:2306119..2306121);gbkey=tRNA;product=tRNA-Ser NC_014029.1 RefSeq gene 2306431 2307543 . - . ID=gene2112;Name=YPZ3_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10590;old_locus_tag=YPZ3_1788 NC_014029.1 Protein Homology CDS 2306431 2307543 . - 0 ID=cds2081;Parent=gene2112;Dbxref=Genbank:WP_002211222.1;Name=WP_002211222.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NC_014029.1 RefSeq gene 2307557 2308387 . - . ID=gene2113;Name=YPZ3_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10595;old_locus_tag=YPZ3_1789 NC_014029.1 Protein Homology CDS 2307557 2308387 . - 0 ID=cds2082;Parent=gene2113;Dbxref=Genbank:WP_002211223.1;Name=WP_002211223.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11 NC_014029.1 RefSeq gene 2308602 2308928 . + . ID=gene2114;Name=YPZ3_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10600;old_locus_tag=YPZ3_1790 NC_014029.1 Protein Homology CDS 2308602 2308928 . + 0 ID=cds2083;Parent=gene2114;Dbxref=Genbank:WP_002211224.1;Name=WP_002211224.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211224.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2308906 2309624 . + . ID=id166;gbkey=repeat_region NC_014029.1 RefSeq gene 2309016 2309474 . - . ID=gene2115;Name=YPZ3_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10605;old_locus_tag=YPZ3_1791 NC_014029.1 Protein Homology CDS 2309016 2309474 . - 0 ID=cds2084;Parent=gene2115;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 2309642 2310379 . + . ID=gene2116;Name=YPZ3_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10610;old_locus_tag=YPZ3_1792 NC_014029.1 Protein Homology CDS 2309642 2310379 . + 0 ID=cds2085;Parent=gene2116;Dbxref=Genbank:WP_002211225.1;Name=WP_002211225.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211225.1;transl_table=11 NC_014029.1 RefSeq gene 2310376 2311242 . + . ID=gene2117;Name=YPZ3_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10615;old_locus_tag=YPZ3_1793 NC_014029.1 Protein Homology CDS 2310376 2311242 . + 0 ID=cds2086;Parent=gene2117;Dbxref=Genbank:WP_002211226.1;Name=WP_002211226.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211226.1;transl_table=11 NC_014029.1 RefSeq gene 2311239 2312075 . + . ID=gene2118;Name=YPZ3_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10620;old_locus_tag=YPZ3_1794 NC_014029.1 Protein Homology CDS 2311239 2312075 . + 0 ID=cds2087;Parent=gene2118;Dbxref=Genbank:WP_002211227.1;Name=WP_002211227.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NC_014029.1 RefSeq gene 2312095 2313177 . + . ID=gene2119;Name=YPZ3_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10625;old_locus_tag=YPZ3_1795 NC_014029.1 Protein Homology CDS 2312095 2313177 . + 0 ID=cds2088;Parent=gene2119;Dbxref=Genbank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211228.1;transl_table=11 NC_014029.1 RefSeq gene 2313478 2314353 . + . ID=gene2120;Name=YPZ3_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10630;old_locus_tag=YPZ3_1796 NC_014029.1 Protein Homology CDS 2313478 2314353 . + 0 ID=cds2089;Parent=gene2120;Dbxref=Genbank:WP_002211229.1;Name=WP_002211229.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211229.1;transl_table=11 NC_014029.1 RefSeq gene 2314495 2314584 . + . ID=gene2121;Name=YPZ3_RS10635;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS10635;old_locus_tag=YPZ3_t24 NC_014029.1 tRNAscan-SE tRNA 2314495 2314584 . + . ID=rna29;Parent=gene2121;anticodon=(pos:2314529..2314531);gbkey=tRNA;product=tRNA-Ser NC_014029.1 tRNAscan-SE exon 2314495 2314584 . + . ID=id167;Parent=rna29;anticodon=(pos:2314529..2314531);gbkey=tRNA;product=tRNA-Ser NC_014029.1 RefSeq gene 2314885 2315181 . + . ID=gene2122;Name=YPZ3_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10640 NC_014029.1 Protein Homology CDS 2314885 2315181 . + 0 ID=cds2090;Parent=gene2122;Dbxref=Genbank:WP_002217150.1;Name=WP_002217150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217150.1;transl_table=11 NC_014029.1 RefSeq gene 2315420 2317117 . + . ID=gene2123;Name=YPZ3_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10645;old_locus_tag=YPZ3_1797 NC_014029.1 Protein Homology CDS 2315420 2317117 . + 0 ID=cds2091;Parent=gene2123;Dbxref=Genbank:WP_002224472.1;Name=WP_002224472.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_002224472.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2317160 2317331 . + . ID=id168;gbkey=repeat_region NC_014029.1 RefSeq gene 2317471 2318325 . - . ID=gene2124;Name=YPZ3_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10650;old_locus_tag=YPZ3_1798 NC_014029.1 Protein Homology CDS 2317471 2318325 . - 0 ID=cds2092;Parent=gene2124;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11 NC_014029.1 RefSeq gene 2318421 2319230 . - . ID=gene2125;Name=YPZ3_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10655;old_locus_tag=YPZ3_1799 NC_014029.1 Protein Homology CDS 2318421 2319230 . - 0 ID=cds2093;Parent=gene2125;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11 NC_014029.1 RefSeq gene 2319227 2319628 . - . ID=gene2126;Name=YPZ3_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10660;old_locus_tag=YPZ3_1800 NC_014029.1 Protein Homology CDS 2319227 2319628 . - 0 ID=cds2094;Parent=gene2126;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11 NC_014029.1 RefSeq gene 2319692 2320522 . - . ID=gene2127;Name=YPZ3_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10665;old_locus_tag=YPZ3_1801 NC_014029.1 Protein Homology CDS 2319692 2320522 . - 0 ID=cds2095;Parent=gene2127;Dbxref=Genbank:WP_002211235.1;Name=WP_002211235.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=release factor glutamine methyltransferase;protein_id=WP_002211235.1;transl_table=11 NC_014029.1 RefSeq gene 2320522 2321604 . - . ID=gene2128;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YPZ3_RS10670;old_locus_tag=YPZ3_1802 NC_014029.1 Protein Homology CDS 2320522 2321604 . - 0 ID=cds2096;Parent=gene2128;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NC_014029.1 RefSeq gene 2321637 2322899 . - . ID=gene2129;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YPZ3_RS10675;old_locus_tag=YPZ3_1803 NC_014029.1 Protein Homology CDS 2321637 2322899 . - 0 ID=cds2097;Parent=gene2129;Dbxref=Genbank:WP_002211237.1;Name=WP_002211237.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NC_014029.1 RefSeq gene 2323205 2323828 . + . ID=gene2130;Name=YPZ3_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10680;old_locus_tag=YPZ3_1804 NC_014029.1 Protein Homology CDS 2323205 2323828 . + 0 ID=cds2098;Parent=gene2130;Dbxref=Genbank:WP_002224468.1;Name=WP_002224468.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_002224468.1;transl_table=11 NC_014029.1 RefSeq gene 2323830 2324729 . + . ID=gene2131;Name=YPZ3_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10685;old_locus_tag=YPZ3_1805 NC_014029.1 Protein Homology CDS 2323830 2324729 . + 0 ID=cds2099;Parent=gene2131;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NC_014029.1 RefSeq gene 2324910 2325020 . + . ID=gene2132;Name=YPZ3_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10690 NC_014029.1 Protein Homology CDS 2324910 2325020 . + 0 ID=cds2100;Parent=gene2132;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11 NC_014029.1 RefSeq gene 2325070 2326017 . + . ID=gene2133;Name=YPZ3_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10695;old_locus_tag=YPZ3_1806 NC_014029.1 Protein Homology CDS 2325070 2326017 . + 0 ID=cds2101;Parent=gene2133;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11 NC_014029.1 RefSeq gene 2326115 2326228 . + . ID=gene2134;Name=YPZ3_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10700 NC_014029.1 Protein Homology CDS 2326115 2326228 . + 0 ID=cds2102;Parent=gene2134;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11 NC_014029.1 RefSeq gene 2326219 2326491 . - . ID=gene2135;Name=YPZ3_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10705 NC_014029.1 Protein Homology CDS 2326219 2326491 . - 0 ID=cds2103;Parent=gene2135;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11 NC_014029.1 RefSeq gene 2326853 2327443 . + . ID=gene2136;Name=YPZ3_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10710;old_locus_tag=YPZ3_1807 NC_014029.1 Protein Homology CDS 2326853 2327443 . + 0 ID=cds2104;Parent=gene2136;Dbxref=Genbank:WP_002218168.1;Name=WP_002218168.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_002218168.1;transl_table=11 NC_014029.1 RefSeq gene 2327607 2328698 . + . ID=gene2137;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YPZ3_RS10715;old_locus_tag=YPZ3_1808 NC_014029.1 Protein Homology CDS 2327607 2328698 . + 0 ID=cds2105;Parent=gene2137;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11 NC_014029.1 RefSeq gene 2329121 2329309 . + . ID=gene2138;Name=YPZ3_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10720 NC_014029.1 Protein Homology CDS 2329121 2329309 . + 0 ID=cds2106;Parent=gene2138;Dbxref=Genbank:WP_002354205.1;Name=WP_002354205.1;gbkey=CDS;product=transposase;protein_id=WP_002354205.1;transl_table=11 NC_014029.1 RefSeq gene 2329327 2329836 . + . ID=gene2139;Name=YPZ3_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10725 NC_014029.1 Protein Homology CDS 2329327 2329836 . + 0 ID=cds2107;Parent=gene2139;Dbxref=Genbank:WP_002211246.1;Name=WP_002211246.1;gbkey=CDS;product=integrase;protein_id=WP_002211246.1;transl_table=11 NC_014029.1 RefSeq gene 2329884 2330282 . - . ID=gene2140;Name=YPZ3_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10730;old_locus_tag=YPZ3_1810 NC_014029.1 Protein Homology CDS 2329884 2330282 . - 0 ID=cds2108;Parent=gene2140;Dbxref=Genbank:WP_002211247.1;Name=WP_002211247.1;gbkey=CDS;product=rhodanese;protein_id=WP_002211247.1;transl_table=11 NC_014029.1 RefSeq gene 2330290 2331120 . - . ID=gene2141;Name=YPZ3_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10735;old_locus_tag=YPZ3_1811 NC_014029.1 Protein Homology CDS 2330290 2331120 . - 0 ID=cds2109;Parent=gene2141;Dbxref=Genbank:WP_002211248.1;Name=WP_002211248.1;gbkey=CDS;product=esterase;protein_id=WP_002211248.1;transl_table=11 NC_014029.1 RefSeq gene 2331117 2331773 . - . ID=gene2142;Name=YPZ3_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10740;old_locus_tag=YPZ3_1812 NC_014029.1 Protein Homology CDS 2331117 2331773 . - 0 ID=cds2110;Parent=gene2142;Dbxref=Genbank:WP_002216887.1;Name=WP_002216887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216887.1;transl_table=11 NC_014029.1 RefSeq gene 2332404 2333246 . + . ID=gene2143;Name=YPZ3_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10745;old_locus_tag=YPZ3_1813 NC_014029.1 Protein Homology CDS 2332404 2333246 . + 0 ID=cds2111;Parent=gene2143;Dbxref=Genbank:WP_002211249.1;Name=WP_002211249.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211249.1;transl_table=11 NC_014029.1 RefSeq gene 2333455 2334150 . - . ID=gene2144;Name=YPZ3_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10750;old_locus_tag=YPZ3_1814 NC_014029.1 Protein Homology CDS 2333455 2334150 . - 0 ID=cds2112;Parent=gene2144;Dbxref=Genbank:WP_002211250.1;Name=WP_002211250.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211250.1;transl_table=11 NC_014029.1 RefSeq gene 2334165 2334830 . - . ID=gene2145;Name=YPZ3_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10755;old_locus_tag=YPZ3_1815 NC_014029.1 Protein Homology CDS 2334165 2334830 . - 0 ID=cds2113;Parent=gene2145;Dbxref=Genbank:WP_002211251.1;Name=WP_002211251.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11 NC_014029.1 RefSeq gene 2335021 2336112 . - . ID=gene2146;Name=YPZ3_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10760;old_locus_tag=YPZ3_1816 NC_014029.1 Protein Homology CDS 2335021 2336112 . - 0 ID=cds2114;Parent=gene2146;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11 NC_014029.1 RefSeq gene 2336377 2337069 . + . ID=gene2147;Name=YPZ3_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10765;old_locus_tag=YPZ3_1817 NC_014029.1 Protein Homology CDS 2336377 2337069 . + 0 ID=cds2115;Parent=gene2147;Dbxref=Genbank:WP_002211253.1;Name=WP_002211253.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211253.1;transl_table=11 NC_014029.1 RefSeq gene 2337081 2338466 . + . ID=gene2148;Name=YPZ3_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10770;old_locus_tag=YPZ3_1818 NC_014029.1 Protein Homology CDS 2337081 2338466 . + 0 ID=cds2116;Parent=gene2148;Dbxref=Genbank:WP_002211254.1;Name=WP_002211254.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11 NC_014029.1 RefSeq gene 2338743 2339165 . + . ID=gene2149;Name=YPZ3_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10775;old_locus_tag=YPZ3_1819 NC_014029.1 Protein Homology CDS 2338743 2339165 . + 0 ID=cds2117;Parent=gene2149;Dbxref=Genbank:WP_002211255.1;Name=WP_002211255.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002211255.1;transl_table=11 NC_014029.1 RefSeq gene 2339220 2339690 . + . ID=gene2150;Name=YPZ3_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10780;old_locus_tag=YPZ3_1820 NC_014029.1 Protein Homology CDS 2339220 2339690 . + 0 ID=cds2118;Parent=gene2150;Dbxref=Genbank:WP_002211256.1;Name=WP_002211256.1;gbkey=CDS;product=cupin;protein_id=WP_002211256.1;transl_table=11 NC_014029.1 RefSeq gene 2339903 2340976 . + . ID=gene2151;Name=YPZ3_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10785;old_locus_tag=YPZ3_1821 NC_014029.1 Protein Homology CDS 2339903 2340976 . + 0 ID=cds2119;Parent=gene2151;Dbxref=Genbank:WP_002211257.1;Name=WP_002211257.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11 NC_014029.1 RefSeq gene 2341767 2342672 . + . ID=gene2152;Name=YPZ3_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10790;old_locus_tag=YPZ3_1822 NC_014029.1 Protein Homology CDS 2341767 2342672 . + 0 ID=cds2120;Parent=gene2152;Dbxref=Genbank:WP_002211258.1;Name=WP_002211258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211258.1;transl_table=11 NC_014029.1 RefSeq gene 2342678 2343610 . + . ID=gene2153;Name=YPZ3_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10795;old_locus_tag=YPZ3_1823 NC_014029.1 Protein Homology CDS 2342678 2343610 . + 0 ID=cds2121;Parent=gene2153;Dbxref=Genbank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NC_014029.1 RefSeq gene 2343597 2344547 . + . ID=gene2154;Name=YPZ3_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10800;old_locus_tag=YPZ3_1824 NC_014029.1 Protein Homology CDS 2343597 2344547 . + 0 ID=cds2122;Parent=gene2154;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NC_014029.1 RefSeq gene 2344888 2345568 . + . ID=gene2155;Name=YPZ3_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10805;old_locus_tag=YPZ3_1825 NC_014029.1 Protein Homology CDS 2344888 2345568 . + 0 ID=cds2123;Parent=gene2155;Dbxref=Genbank:WP_002211261.1;Name=WP_002211261.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211261.1;transl_table=11 NC_014029.1 RefSeq gene 2345673 2346332 . + . ID=gene2156;Name=YPZ3_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10810;old_locus_tag=YPZ3_1826 NC_014029.1 Protein Homology CDS 2345673 2346332 . + 0 ID=cds2124;Parent=gene2156;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11 NC_014029.1 RefSeq gene 2346467 2347105 . - . ID=gene2157;Name=YPZ3_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10815;old_locus_tag=YPZ3_1827 NC_014029.1 Protein Homology CDS 2346467 2347105 . - 0 ID=cds2125;Parent=gene2157;Dbxref=Genbank:WP_002211263.1;Name=WP_002211263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211263.1;transl_table=11 NC_014029.1 RefSeq gene 2347161 2347349 . + . ID=gene2158;Name=YPZ3_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10820 NC_014029.1 Protein Homology CDS 2347161 2347349 . + 0 ID=cds2126;Parent=gene2158;Dbxref=Genbank:WP_002211264.1;Name=WP_002211264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211264.1;transl_table=11 NC_014029.1 RefSeq gene 2347352 2349463 . - . ID=gene2159;Name=YPZ3_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10825;old_locus_tag=YPZ3_1828 NC_014029.1 Protein Homology CDS 2347352 2349463 . - 0 ID=cds2127;Parent=gene2159;Dbxref=Genbank:WP_002211265.1;Name=WP_002211265.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211265.1;transl_table=11 NC_014029.1 RefSeq gene 2350041 2352203 . + . ID=gene2160;Name=YPZ3_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10830;old_locus_tag=YPZ3_1829 NC_014029.1 Protein Homology CDS 2350041 2352203 . + 0 ID=cds2128;Parent=gene2160;Dbxref=Genbank:WP_002211266.1;Name=WP_002211266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211266.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2352285 2353604 . + . ID=id169;gbkey=repeat_region NC_014029.1 RefSeq gene 2352323 2353531 . - . ID=gene2161;Name=YPZ3_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10835;old_locus_tag=YPZ3_1830 NC_014029.1 Protein Homology CDS 2352323 2353531 . - 0 ID=cds2129;Parent=gene2161;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2353650 2355308 . + . ID=gene2162;Name=YPZ3_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10840;old_locus_tag=YPZ3_1831 NC_014029.1 Protein Homology CDS 2353650 2355308 . + 0 ID=cds2130;Parent=gene2162;Dbxref=Genbank:WP_002211267.1;Name=WP_002211267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211267.1;transl_table=11 NC_014029.1 RefSeq gene 2355478 2355942 . + . ID=gene2163;Name=YPZ3_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10845;old_locus_tag=YPZ3_1832 NC_014029.1 Protein Homology CDS 2355478 2355942 . + 0 ID=cds2131;Parent=gene2163;Dbxref=Genbank:WP_002211268.1;Name=WP_002211268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211268.1;transl_table=11 NC_014029.1 RefSeq gene 2356103 2357290 . - . ID=gene2164;Name=YPZ3_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10850;old_locus_tag=YPZ3_1833 NC_014029.1 Protein Homology CDS 2356103 2357290 . - 0 ID=cds2132;Parent=gene2164;Dbxref=Genbank:WP_002211269.1;Name=WP_002211269.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002211269.1;transl_table=11 NC_014029.1 RefSeq gene 2357287 2357871 . - . ID=gene2165;Name=YPZ3_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10855;old_locus_tag=YPZ3_1834 NC_014029.1 Protein Homology CDS 2357287 2357871 . - 0 ID=cds2133;Parent=gene2165;Dbxref=Genbank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11 NC_014029.1 RefSeq gene 2357868 2359022 . - . ID=gene2166;Name=YPZ3_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10860;old_locus_tag=YPZ3_1835 NC_014029.1 Protein Homology CDS 2357868 2359022 . - 0 ID=cds2134;Parent=gene2166;Dbxref=Genbank:WP_002214329.1;Name=WP_002214329.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002214329.1;transl_table=11 NC_014029.1 RefSeq gene 2359022 2359984 . - . ID=gene2167;Name=YPZ3_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10865;old_locus_tag=YPZ3_1836 NC_014029.1 Protein Homology CDS 2359022 2359984 . - 0 ID=cds2135;Parent=gene2167;Dbxref=Genbank:WP_002211271.1;Name=WP_002211271.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211271.1;transl_table=11 NC_014029.1 RefSeq gene 2360118 2361404 . - . ID=gene2168;Name=YPZ3_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10870;old_locus_tag=YPZ3_1837 NC_014029.1 Protein Homology CDS 2360118 2361404 . - 0 ID=cds2136;Parent=gene2168;Dbxref=Genbank:WP_002211273.1;Name=WP_002211273.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_002211273.1;transl_table=11 NC_014029.1 RefSeq gene 2361401 2362207 . - . ID=gene2169;Name=YPZ3_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10875;old_locus_tag=YPZ3_1838 NC_014029.1 Protein Homology CDS 2361401 2362207 . - 0 ID=cds2137;Parent=gene2169;Dbxref=Genbank:WP_002214335.1;Name=WP_002214335.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002214335.1;transl_table=11 NC_014029.1 RefSeq gene 2362200 2363216 . - . ID=gene2170;Name=YPZ3_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10880;old_locus_tag=YPZ3_1839 NC_014029.1 Protein Homology CDS 2362200 2363216 . - 0 ID=cds2138;Parent=gene2170;Dbxref=Genbank:WP_002211275.1;Name=WP_002211275.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211275.1;transl_table=11 NC_014029.1 RefSeq gene 2363230 2363760 . - . ID=gene2171;Name=YPZ3_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10885 NC_014029.1 Protein Homology CDS 2363230 2363760 . - 0 ID=cds2139;Parent=gene2171;Dbxref=Genbank:WP_002214337.1;Name=WP_002214337.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002214337.1;transl_table=11 NC_014029.1 RefSeq gene 2363729 2364238 . - . ID=gene2172;Name=YPZ3_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10890;old_locus_tag=YPZ3_1841 NC_014029.1 Protein Homology CDS 2363729 2364238 . - 0 ID=cds2140;Parent=gene2172;Dbxref=Genbank:WP_002214339.1;Name=WP_002214339.1;gbkey=CDS;product=thiolase;protein_id=WP_002214339.1;transl_table=11 NC_014029.1 RefSeq gene 2365247 2366851 . + . ID=gene2173;Name=YPZ3_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10895;old_locus_tag=YPZ3_1842 NC_014029.1 Protein Homology CDS 2365247 2366851 . + 0 ID=cds2141;Parent=gene2173;Dbxref=Genbank:WP_002211277.1;Name=WP_002211277.1;gbkey=CDS;product=chorismate-binding enzyme domain protein;protein_id=WP_002211277.1;transl_table=11 NC_014029.1 RefSeq gene 2367029 2367601 . - . ID=gene2174;Name=YPZ3_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10900;old_locus_tag=YPZ3_1843 NC_014029.1 Protein Homology CDS 2367029 2367601 . - 0 ID=cds2142;Parent=gene2174;Dbxref=Genbank:WP_002211278.1;Name=WP_002211278.1;gbkey=CDS;product=cold inducible protein Ves;protein_id=WP_002211278.1;transl_table=11 NC_014029.1 RefSeq gene 2367601 2368971 . - . ID=gene2175;Name=YPZ3_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10905;old_locus_tag=YPZ3_1844 NC_014029.1 Protein Homology CDS 2367601 2368971 . - 0 ID=cds2143;Parent=gene2175;Dbxref=Genbank:WP_002211279.1;Name=WP_002211279.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_002211279.1;transl_table=11 NC_014029.1 RefSeq gene 2369119 2369886 . + . ID=gene2176;Name=YPZ3_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10910;old_locus_tag=YPZ3_1845 NC_014029.1 Protein Homology CDS 2369119 2369886 . + 0 ID=cds2144;Parent=gene2176;Dbxref=Genbank:WP_002211280.1;Name=WP_002211280.1;gbkey=CDS;product=histidine utilization repressor;protein_id=WP_002211280.1;transl_table=11 NC_014029.1 RefSeq gene 2370090 2371310 . + . ID=gene2177;Name=YPZ3_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10915;old_locus_tag=YPZ3_1846 NC_014029.1 Protein Homology CDS 2370090 2371310 . + 0 ID=cds2145;Parent=gene2177;Dbxref=Genbank:WP_002211281.1;Name=WP_002211281.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_002211281.1;transl_table=11 NC_014029.1 RefSeq gene 2371307 2372113 . + . ID=gene2178;Name=YPZ3_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10920;old_locus_tag=YPZ3_1847 NC_014029.1 Protein Homology CDS 2371307 2372113 . + 0 ID=cds2146;Parent=gene2178;Dbxref=Genbank:WP_002211282.1;Name=WP_002211282.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_002211282.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2372614 2374572 . + . ID=id170;gbkey=repeat_region NC_014029.1 RefSeq gene 2372682 2373461 . - . ID=gene2179;Name=YPZ3_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10925;old_locus_tag=YPZ3_1848 NC_014029.1 Protein Homology CDS 2372682 2373461 . - 0 ID=cds2147;Parent=gene2179;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 2373461 2374483 . - . ID=gene2180;Name=YPZ3_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10930;old_locus_tag=YPZ3_1849 NC_014029.1 Protein Homology CDS 2373461 2374483 . - 0 ID=cds2148;Parent=gene2180;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 2374540 2374767 . + . ID=gene2181;Name=YPZ3_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10935 NC_014029.1 Protein Homology CDS 2374540 2374767 . + 0 ID=cds2149;Parent=gene2181;Dbxref=Genbank:WP_002215429.1;Name=WP_002215429.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215429.1;transl_table=11 NC_014029.1 RefSeq gene 2374751 2374873 . - . ID=gene2182;Name=YPZ3_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10940 NC_014029.1 Protein Homology CDS 2374751 2374873 . - 0 ID=cds2150;Parent=gene2182;Dbxref=Genbank:WP_002213181.1;Name=WP_002213181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213181.1;transl_table=11 NC_014029.1 RefSeq gene 2374961 2375146 . + . ID=gene2183;Name=YPZ3_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10945 NC_014029.1 Protein Homology CDS 2374961 2375146 . + 0 ID=cds2151;Parent=gene2183;Dbxref=Genbank:WP_002215428.1;Name=WP_002215428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215428.1;transl_table=11 NC_014029.1 RefSeq gene 2375162 2375386 . + . ID=gene2184;Name=YPZ3_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10950 NC_014029.1 Protein Homology CDS 2375162 2375386 . + 0 ID=cds2152;Parent=gene2184;Dbxref=Genbank:WP_002213183.1;Name=WP_002213183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213183.1;transl_table=11 NC_014029.1 RefSeq gene 2375396 2375548 . - . ID=gene2185;Name=YPZ3_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10955 NC_014029.1 Protein Homology CDS 2375396 2375548 . - 0 ID=cds2153;Parent=gene2185;Dbxref=Genbank:WP_002231175.1;Name=WP_002231175.1;gbkey=CDS;product=sugar ABC transporter ATPase;protein_id=WP_002231175.1;transl_table=11 NC_014029.1 RefSeq gene 2375623 2376513 . - . ID=gene2186;Name=YPZ3_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10960;old_locus_tag=YPZ3_1850 NC_014029.1 Protein Homology CDS 2375623 2376513 . - 0 ID=cds2154;Parent=gene2186;Dbxref=Genbank:WP_002215425.1;Name=WP_002215425.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002215425.1;transl_table=11 NC_014029.1 RefSeq gene 2376538 2377365 . - . ID=gene2187;Name=YPZ3_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10965;old_locus_tag=YPZ3_1851 NC_014029.1 Protein Homology CDS 2376538 2377365 . - 0 ID=cds2155;Parent=gene2187;Dbxref=Genbank:WP_002213186.1;Name=WP_002213186.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213186.1;transl_table=11 NC_014029.1 RefSeq gene 2377358 2378218 . - . ID=gene2188;Name=YPZ3_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10970;old_locus_tag=YPZ3_1852 NC_014029.1 Protein Homology CDS 2377358 2378218 . - 0 ID=cds2156;Parent=gene2188;Dbxref=Genbank:WP_002213188.1;Name=WP_002213188.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NC_014029.1 RefSeq gene 2378285 2379553 . - . ID=gene2189;Name=YPZ3_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10975;old_locus_tag=YPZ3_1853 NC_014029.1 Protein Homology CDS 2378285 2379553 . - 0 ID=cds2157;Parent=gene2189;Dbxref=Genbank:WP_002213190.1;Name=WP_002213190.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002213190.1;transl_table=11 NC_014029.1 RefSeq gene 2379583 2380596 . - . ID=gene2190;Name=YPZ3_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10980;old_locus_tag=YPZ3_1854 NC_014029.1 Protein Homology CDS 2379583 2380596 . - 0 ID=cds2158;Parent=gene2190;Dbxref=Genbank:WP_002213192.1;Name=WP_002213192.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213192.1;transl_table=11 NC_014029.1 RefSeq gene 2381004 2381294 . + . ID=gene2191;Name=YPZ3_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10985 NC_014029.1 Protein Homology CDS 2381004 2381294 . + 0 ID=cds2159;Parent=gene2191;Dbxref=Genbank:WP_002215421.1;Name=WP_002215421.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215421.1;transl_table=11 NC_014029.1 RefSeq gene 2381264 2382061 . - . ID=gene2192;Name=YPZ3_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10990;old_locus_tag=YPZ3_1855 NC_014029.1 Protein Homology CDS 2381264 2382061 . - 0 ID=cds2160;Parent=gene2192;Dbxref=Genbank:WP_002213201.1;Name=WP_002213201.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NC_014029.1 RefSeq gene 2382248 2382352 . - . ID=gene2193;Name=YPZ3_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS10995 NC_014029.1 Protein Homology CDS 2382248 2382352 . - 0 ID=cds2161;Parent=gene2193;Dbxref=Genbank:WP_002215419.1;Name=WP_002215419.1;gbkey=CDS;product=transposase;protein_id=WP_002215419.1;transl_table=11 NC_014029.1 RefSeq gene 2383030 2383464 . + . ID=gene2194;Name=YPZ3_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11000 NC_014029.1 Protein Homology CDS 2383030 2383464 . + 0 ID=cds2162;Parent=gene2194;Dbxref=Genbank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NC_014029.1 RefSeq gene 2383476 2384045 . + . ID=gene2195;Name=YPZ3_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11005;old_locus_tag=YPZ3_1857 NC_014029.1 Protein Homology CDS 2383476 2384045 . + 0 ID=cds2163;Parent=gene2195;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NC_014029.1 RefSeq gene 2384463 2385661 . - . ID=gene2196;Name=YPZ3_RS11010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS11010;pseudo=true NC_014029.1 Protein Homology CDS 2384463 2385661 . - 0 ID=cds2164;Parent=gene2196;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2385709 2386785 . - . ID=gene2197;Name=YPZ3_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11015;old_locus_tag=YPZ3_1860 NC_014029.1 Protein Homology CDS 2385709 2386785 . - 0 ID=cds2165;Parent=gene2197;Dbxref=Genbank:WP_002213208.1;Name=WP_002213208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213208.1;transl_table=11 NC_014029.1 RefSeq gene 2386851 2387141 . - . ID=gene2198;Name=YPZ3_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11020 NC_014029.1 Protein Homology CDS 2386851 2387141 . - 0 ID=cds2166;Parent=gene2198;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11 NC_014029.1 RefSeq gene 2387122 2387394 . - . ID=gene2199;Name=YPZ3_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11025 NC_014029.1 Protein Homology CDS 2387122 2387394 . - 0 ID=cds2167;Parent=gene2199;Dbxref=Genbank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;product=toxin;protein_id=WP_002213210.1;transl_table=11 NC_014029.1 RefSeq gene 2387530 2387784 . + . ID=gene2200;Name=YPZ3_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11030 NC_014029.1 Protein Homology CDS 2387530 2387784 . + 0 ID=cds2168;Parent=gene2200;Dbxref=Genbank:WP_002213211.1;Name=WP_002213211.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_002213211.1;transl_table=11 NC_014029.1 RefSeq gene 2387781 2388080 . + . ID=gene2201;Name=YPZ3_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11035 NC_014029.1 Protein Homology CDS 2387781 2388080 . + 0 ID=cds2169;Parent=gene2201;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11 NC_014029.1 RefSeq gene 2388097 2388384 . + . ID=gene2202;Name=YPZ3_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11040 NC_014029.1 Protein Homology CDS 2388097 2388384 . + 0 ID=cds2170;Parent=gene2202;Dbxref=Genbank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215413.1;transl_table=11 NC_014029.1 RefSeq gene 2388819 2389034 . + . ID=gene2203;Name=YPZ3_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11045 NC_014029.1 Protein Homology CDS 2388819 2389034 . + 0 ID=cds2171;Parent=gene2203;Dbxref=Genbank:WP_002215412.1;Name=WP_002215412.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215412.1;transl_table=11 NC_014029.1 RefSeq gene 2389031 2389336 . + . ID=gene2204;Name=YPZ3_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11050;old_locus_tag=YPZ3_1861 NC_014029.1 Protein Homology CDS 2389031 2389336 . + 0 ID=cds2172;Parent=gene2204;Dbxref=Genbank:WP_002215411.1;Name=WP_002215411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215411.1;transl_table=11 NC_014029.1 RefSeq gene 2389317 2389595 . + . ID=gene2205;Name=YPZ3_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11055 NC_014029.1 Protein Homology CDS 2389317 2389595 . + 0 ID=cds2173;Parent=gene2205;Dbxref=Genbank:WP_002215410.1;Name=WP_002215410.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215410.1;transl_table=11 NC_014029.1 RefSeq gene 2389760 2389900 . + . ID=gene2206;Name=YPZ3_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11060 NC_014029.1 Protein Homology CDS 2389760 2389900 . + 0 ID=cds2174;Parent=gene2206;Dbxref=Genbank:WP_002213214.1;Name=WP_002213214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213214.1;transl_table=11 NC_014029.1 RefSeq gene 2389948 2390430 . + . ID=gene2207;Name=YPZ3_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11065;old_locus_tag=YPZ3_1862 NC_014029.1 Protein Homology CDS 2389948 2390430 . + 0 ID=cds2175;Parent=gene2207;Dbxref=Genbank:WP_032465626.1;Name=WP_032465626.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_032465626.1;transl_table=11 NC_014029.1 RefSeq gene 2390502 2391461 . + . ID=gene2208;Name=YPZ3_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11070;old_locus_tag=YPZ3_1863 NC_014029.1 Protein Homology CDS 2390502 2391461 . + 0 ID=cds2176;Parent=gene2208;Dbxref=Genbank:WP_002213218.1;Name=WP_002213218.1;gbkey=CDS;product=transposase;protein_id=WP_002213218.1;transl_table=11 NC_014029.1 RefSeq gene 2391681 2392025 . + . ID=gene2209;Name=YPZ3_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11075;old_locus_tag=YPZ3_1864 NC_014029.1 Protein Homology CDS 2391681 2392025 . + 0 ID=cds2177;Parent=gene2209;Dbxref=Genbank:WP_002215406.1;Name=WP_002215406.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215406.1;transl_table=11 NC_014029.1 RefSeq gene 2392051 2392248 . + . ID=gene2210;Name=YPZ3_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11080 NC_014029.1 Protein Homology CDS 2392051 2392248 . + 0 ID=cds2178;Parent=gene2210;Dbxref=Genbank:WP_002231182.1;Name=WP_002231182.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231182.1;transl_table=11 NC_014029.1 RefSeq gene 2392278 2392460 . - . ID=gene2211;Name=YPZ3_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11085 NC_014029.1 Protein Homology CDS 2392278 2392460 . - 0 ID=cds2179;Parent=gene2211;Dbxref=Genbank:WP_002213223.1;Name=WP_002213223.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213223.1;transl_table=11 NC_014029.1 RefSeq gene 2393070 2393192 . - . ID=gene2212;Name=YPZ3_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11090 NC_014029.1 Protein Homology CDS 2393070 2393192 . - 0 ID=cds2180;Parent=gene2212;Dbxref=Genbank:WP_002213228.1;Name=WP_002213228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213228.1;transl_table=11 NC_014029.1 RefSeq gene 2393585 2393812 . - . ID=gene2213;Name=YPZ3_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11095 NC_014029.1 Protein Homology CDS 2393585 2393812 . - 0 ID=cds2181;Parent=gene2213;Dbxref=Genbank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002215401.1;transl_table=11 NC_014029.1 RefSeq gene 2393923 2394438 . + . ID=gene2214;Name=YPZ3_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11100 NC_014029.1 Protein Homology CDS 2393923 2394438 . + 0 ID=cds2182;Parent=gene2214;Dbxref=Genbank:WP_002215399.1;Name=WP_002215399.1;gbkey=CDS;product=integrase;protein_id=WP_002215399.1;transl_table=11 NC_014029.1 RefSeq gene 2394736 2394821 . - . ID=gene2215;Name=YPZ3_RS11105;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS11105;old_locus_tag=YPZ3_t25 NC_014029.1 tRNAscan-SE tRNA 2394736 2394821 . - . ID=rna30;Parent=gene2215;anticodon=(pos:complement(2394785..2394787));gbkey=tRNA;product=tRNA-Leu NC_014029.1 tRNAscan-SE exon 2394736 2394821 . - . ID=id171;Parent=rna30;anticodon=(pos:complement(2394785..2394787));gbkey=tRNA;product=tRNA-Leu NC_014029.1 RefSeq gene 2394832 2394905 . - . ID=gene2216;Name=YPZ3_RS11110;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS11110;old_locus_tag=YPZ3_t26 NC_014029.1 tRNAscan-SE tRNA 2394832 2394905 . - . ID=rna31;Parent=gene2216;anticodon=(pos:complement(2394871..2394873));gbkey=tRNA;product=tRNA-Cys NC_014029.1 tRNAscan-SE exon 2394832 2394905 . - . ID=id172;Parent=rna31;anticodon=(pos:complement(2394871..2394873));gbkey=tRNA;product=tRNA-Cys NC_014029.1 RefSeq gene 2394958 2395033 . - . ID=gene2217;Name=YPZ3_RS11115;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS11115;old_locus_tag=YPZ3_t27 NC_014029.1 tRNAscan-SE tRNA 2394958 2395033 . - . ID=rna32;Parent=gene2217;anticodon=(pos:complement(2394998..2395000));gbkey=tRNA;product=tRNA-Gly NC_014029.1 tRNAscan-SE exon 2394958 2395033 . - . ID=id173;Parent=rna32;anticodon=(pos:complement(2394998..2395000));gbkey=tRNA;product=tRNA-Gly NC_014029.1 RefSeq gene 2395178 2395726 . - . ID=gene2218;Name=YPZ3_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11120;old_locus_tag=YPZ3_1865 NC_014029.1 Protein Homology CDS 2395178 2395726 . - 0 ID=cds2183;Parent=gene2218;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NC_014029.1 RefSeq gene 2395785 2397617 . - . ID=gene2219;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YPZ3_RS11125;old_locus_tag=YPZ3_1866 NC_014029.1 Protein Homology CDS 2395785 2397617 . - 0 ID=cds2184;Parent=gene2219;Dbxref=Genbank:WP_002220477.1;Name=WP_002220477.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_002220477.1;transl_table=11 NC_014029.1 RefSeq gene 2397610 2398266 . - . ID=gene2220;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=YPZ3_RS11130;old_locus_tag=YPZ3_1867 NC_014029.1 Protein Homology CDS 2397610 2398266 . - 0 ID=cds2185;Parent=gene2220;Dbxref=Genbank:WP_002211176.1;Name=WP_002211176.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_002211176.1;transl_table=11 NC_014029.1 RefSeq gene 2398929 2399153 . + . ID=gene2221;Name=YPZ3_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11135 NC_014029.1 Protein Homology CDS 2398929 2399153 . + 0 ID=cds2186;Parent=gene2221;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11 NC_014029.1 RefSeq gene 2399281 2399622 . + . ID=gene2222;Name=YPZ3_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11140;old_locus_tag=YPZ3_1868 NC_014029.1 Protein Homology CDS 2399281 2399622 . + 0 ID=cds2187;Parent=gene2222;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11 NC_014029.1 RefSeq gene 2399650 2399904 . - . ID=gene2223;Name=YPZ3_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11145 NC_014029.1 Protein Homology CDS 2399650 2399904 . - 0 ID=cds2188;Parent=gene2223;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11 NC_014029.1 RefSeq gene 2400244 2400795 . - . ID=gene2224;Name=YPZ3_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11150;old_locus_tag=YPZ3_1869 NC_014029.1 Protein Homology CDS 2400244 2400795 . - 0 ID=cds2189;Parent=gene2224;Dbxref=Genbank:WP_002211172.1;Name=WP_002211172.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002211172.1;transl_table=11 NC_014029.1 RefSeq gene 2401482 2401557 . - . ID=gene2225;Name=YPZ3_RS11155;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS11155;old_locus_tag=YPZ3_t28 NC_014029.1 tRNAscan-SE tRNA 2401482 2401557 . - . ID=rna33;Parent=gene2225;anticodon=(pos:complement(2401522..2401524));gbkey=tRNA;product=tRNA-Lys NC_014029.1 tRNAscan-SE exon 2401482 2401557 . - . ID=id174;Parent=rna33;anticodon=(pos:complement(2401522..2401524));gbkey=tRNA;product=tRNA-Lys NC_014029.1 RefSeq gene 2401910 2403334 . + . ID=gene2226;Name=YPZ3_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11160;old_locus_tag=YPZ3_1870 NC_014029.1 Protein Homology CDS 2401910 2403334 . + 0 ID=cds2190;Parent=gene2226;Dbxref=Genbank:WP_002220481.1;Name=WP_002220481.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220481.1;transl_table=11 NC_014029.1 RefSeq gene 2403460 2404638 . - . ID=gene2227;Name=YPZ3_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11165;old_locus_tag=YPZ3_1871 NC_014029.1 Protein Homology CDS 2403460 2404638 . - 0 ID=cds2191;Parent=gene2227;Dbxref=Genbank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11 NC_014029.1 RefSeq gene 2405032 2405631 . + . ID=gene2228;Name=YPZ3_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11170;old_locus_tag=YPZ3_1872 NC_014029.1 Protein Homology CDS 2405032 2405631 . + 0 ID=cds2192;Parent=gene2228;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11 NC_014029.1 RefSeq gene 2405717 2407021 . - . ID=gene2229;Name=YPZ3_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11175;old_locus_tag=YPZ3_1873 NC_014029.1 Protein Homology CDS 2405717 2407021 . - 0 ID=cds2193;Parent=gene2229;Dbxref=Genbank:WP_002211167.1;Name=WP_002211167.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_002211167.1;transl_table=11 NC_014029.1 RefSeq gene 2407032 2408162 . - . ID=gene2230;Name=YPZ3_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11180;old_locus_tag=YPZ3_1874 NC_014029.1 Protein Homology CDS 2407032 2408162 . - 0 ID=cds2194;Parent=gene2230;Dbxref=Genbank:WP_002211166.1;Name=WP_002211166.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron uptake system component EfeO;protein_id=WP_002211166.1;transl_table=11 NC_014029.1 RefSeq gene 2408192 2409040 . - . ID=gene2231;Name=YPZ3_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11185;old_locus_tag=YPZ3_1875 NC_014029.1 Protein Homology CDS 2408192 2409040 . - 0 ID=cds2195;Parent=gene2231;Dbxref=Genbank:WP_002211165.1;Name=WP_002211165.1;gbkey=CDS;product=ferrous iron permease EfeU;protein_id=WP_002211165.1;transl_table=11 NC_014029.1 RefSeq gene 2409373 2410857 . - . ID=gene2232;Name=YPZ3_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11190;old_locus_tag=YPZ3_1876 NC_014029.1 Protein Homology CDS 2409373 2410857 . - 0 ID=cds2196;Parent=gene2232;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11 NC_014029.1 RefSeq gene 2410887 2411084 . - . ID=gene2233;Name=YPZ3_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11195 NC_014029.1 Protein Homology CDS 2410887 2411084 . - 0 ID=cds2197;Parent=gene2233;Dbxref=Genbank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211163.1;transl_table=11 NC_014029.1 RefSeq gene 2411429 2415400 . + . ID=gene2234;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YPZ3_RS11200;old_locus_tag=YPZ3_1877 NC_014029.1 Protein Homology CDS 2411429 2415400 . + 0 ID=cds2198;Parent=gene2234;Dbxref=Genbank:WP_002211162.1;Name=WP_002211162.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=WP_002211162.1;transl_table=11 NC_014029.1 RefSeq gene 2415906 2416199 . + . ID=gene2235;Name=YPZ3_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11205 NC_014029.1 Protein Homology CDS 2415906 2416199 . + 0 ID=cds2199;Parent=gene2235;Dbxref=Genbank:WP_002211161.1;Name=WP_002211161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211161.1;transl_table=11 NC_014029.1 RefSeq gene 2416233 2416571 . + . ID=gene2236;Name=YPZ3_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11210;old_locus_tag=YPZ3_1878 NC_014029.1 Protein Homology CDS 2416233 2416571 . + 0 ID=cds2200;Parent=gene2236;Dbxref=Genbank:WP_002216048.1;Name=WP_002216048.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216048.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2416707 2416875 . + . ID=id175;gbkey=repeat_region NC_014029.1 RefSeq gene 2416863 2417624 . - . ID=gene2237;Name=YPZ3_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11215;old_locus_tag=YPZ3_1879 NC_014029.1 Protein Homology CDS 2416863 2417624 . - 0 ID=cds2201;Parent=gene2237;Dbxref=Genbank:WP_013060329.1;Name=WP_013060329.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_013060329.1;transl_table=11 NC_014029.1 RefSeq gene 2417627 2418289 . - . ID=gene2238;Name=YPZ3_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11220;old_locus_tag=YPZ3_1880 NC_014029.1 Protein Homology CDS 2417627 2418289 . - 0 ID=cds2202;Parent=gene2238;Dbxref=Genbank:WP_002211158.1;Name=WP_002211158.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002211158.1;transl_table=11 NC_014029.1 RefSeq gene 2418289 2419089 . - . ID=gene2239;Name=YPZ3_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11225;old_locus_tag=YPZ3_1881 NC_014029.1 Protein Homology CDS 2418289 2419089 . - 0 ID=cds2203;Parent=gene2239;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11 NC_014029.1 RefSeq gene 2419213 2420205 . - . ID=gene2240;Name=YPZ3_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11230;old_locus_tag=YPZ3_1882 NC_014029.1 Protein Homology CDS 2419213 2420205 . - 0 ID=cds2204;Parent=gene2240;Dbxref=Genbank:WP_002227959.1;Name=WP_002227959.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_002227959.1;transl_table=11 NC_014029.1 RefSeq gene 2420494 2421003 . - . ID=gene2241;Name=YPZ3_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11235;old_locus_tag=YPZ3_1883 NC_014029.1 Protein Homology CDS 2420494 2421003 . - 0 ID=cds2205;Parent=gene2241;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11 NC_014029.1 RefSeq gene 2421225 2421947 . - . ID=gene2242;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=YPZ3_RS11240;old_locus_tag=YPZ3_1884 NC_014029.1 Protein Homology CDS 2421225 2421947 . - 0 ID=cds2206;Parent=gene2242;Dbxref=Genbank:WP_002211153.1;Name=WP_002211153.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_002211153.1;transl_table=11 NC_014029.1 RefSeq gene 2422294 2423403 . - . ID=gene2243;Name=YPZ3_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11245;old_locus_tag=YPZ3_1885 NC_014029.1 Protein Homology CDS 2422294 2423403 . - 0 ID=cds2207;Parent=gene2243;Dbxref=Genbank:WP_002211152.1;Name=WP_002211152.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002211152.1;transl_table=11 NC_014029.1 RefSeq gene 2423700 2425100 . + . ID=gene2244;Name=YPZ3_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11250;old_locus_tag=YPZ3_1886 NC_014029.1 Protein Homology CDS 2423700 2425100 . + 0 ID=cds2208;Parent=gene2244;Dbxref=Genbank:WP_002211150.1;Name=WP_002211150.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_002211150.1;transl_table=11 NC_014029.1 RefSeq gene 2425111 2425509 . + . ID=gene2245;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPZ3_RS11255;old_locus_tag=YPZ3_1887 NC_014029.1 Protein Homology CDS 2425111 2425509 . + 0 ID=cds2209;Parent=gene2245;Dbxref=Genbank:WP_002211149.1;Name=WP_002211149.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_002211149.1;transl_table=11 NC_014029.1 RefSeq gene 2425520 2425882 . + . ID=gene2246;Name=YPZ3_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11260 NC_014029.1 Protein Homology CDS 2425520 2425882 . + 0 ID=cds2210;Parent=gene2246;Dbxref=Genbank:WP_002211148.1;Name=WP_002211148.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_002211148.1;transl_table=11 NC_014029.1 RefSeq gene 2425937 2426176 . + . ID=gene2247;Name=YPZ3_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11265 NC_014029.1 Protein Homology CDS 2425937 2426176 . + 0 ID=cds2211;Parent=gene2247;Dbxref=Genbank:WP_002215994.1;Name=WP_002215994.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215994.1;transl_table=11 NC_014029.1 RefSeq gene 2426183 2427058 . + . ID=gene2248;Name=YPZ3_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11270;old_locus_tag=YPZ3_1888 NC_014029.1 Protein Homology CDS 2426183 2427058 . + 0 ID=cds2212;Parent=gene2248;Dbxref=Genbank:WP_002211147.1;Name=WP_002211147.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NC_014029.1 RefSeq gene 2427412 2429325 . + . ID=gene2249;Name=YPZ3_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11275;old_locus_tag=YPZ3_1889 NC_014029.1 Protein Homology CDS 2427412 2429325 . + 0 ID=cds2213;Parent=gene2249;Dbxref=Genbank:WP_002229284.1;Name=WP_002229284.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002229284.1;transl_table=11 NC_014029.1 RefSeq gene 2429462 2430367 . + . ID=gene2250;Name=YPZ3_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11280;old_locus_tag=YPZ3_1890 NC_014029.1 Protein Homology CDS 2429462 2430367 . + 0 ID=cds2214;Parent=gene2250;Dbxref=Genbank:WP_002228542.1;Name=WP_002228542.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002228542.1;transl_table=11 NC_014029.1 RefSeq gene 2430528 2431139 . + . ID=gene2251;Name=YPZ3_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11285;old_locus_tag=YPZ3_1891 NC_014029.1 Protein Homology CDS 2430528 2431139 . + 0 ID=cds2215;Parent=gene2251;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11 NC_014029.1 RefSeq gene 2431325 2431801 . - . ID=gene2252;Name=YPZ3_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11290 NC_014029.1 Protein Homology CDS 2431325 2431801 . - 0 ID=cds2216;Parent=gene2252;Dbxref=Genbank:WP_002215992.1;Name=WP_002215992.1;gbkey=CDS;product=death-on-curing family protein;protein_id=WP_002215992.1;transl_table=11 NC_014029.1 RefSeq gene 2431812 2431991 . - . ID=gene2253;Name=YPZ3_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11295 NC_014029.1 Protein Homology CDS 2431812 2431991 . - 0 ID=cds2217;Parent=gene2253;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NC_014029.1 RefSeq gene 2432411 2432722 . - . ID=gene2254;Name=YPZ3_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11300;old_locus_tag=YPZ3_1892 NC_014029.1 Protein Homology CDS 2432411 2432722 . - 0 ID=cds2218;Parent=gene2254;Dbxref=Genbank:WP_002211144.1;Name=WP_002211144.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NC_014029.1 RefSeq gene 2433075 2434787 . + . ID=gene2255;Name=YPZ3_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11305;old_locus_tag=YPZ3_1893 NC_014029.1 Protein Homology CDS 2433075 2434787 . + 0 ID=cds2219;Parent=gene2255;Dbxref=Genbank:WP_002211143.1;Name=WP_002211143.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_002211143.1;transl_table=11 NC_014029.1 RefSeq gene 2434784 2435776 . + . ID=gene2256;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPZ3_RS11310;old_locus_tag=YPZ3_1894 NC_014029.1 Protein Homology CDS 2434784 2435776 . + 0 ID=cds2220;Parent=gene2256;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NC_014029.1 RefSeq gene 2435769 2436485 . + . ID=gene2257;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPZ3_RS11315;old_locus_tag=YPZ3_1895 NC_014029.1 Protein Homology CDS 2435769 2436485 . + 0 ID=cds2221;Parent=gene2257;Dbxref=Genbank:WP_002211141.1;Name=WP_002211141.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_002211141.1;transl_table=11 NC_014029.1 RefSeq gene 2436448 2437902 . + . ID=gene2258;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPZ3_RS11320;old_locus_tag=YPZ3_1896 NC_014029.1 Protein Homology CDS 2436448 2437902 . + 0 ID=cds2222;Parent=gene2258;Dbxref=Genbank:WP_002211140.1;Name=WP_002211140.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=WP_002211140.1;transl_table=11 NC_014029.1 RefSeq gene 2438002 2438448 . + . ID=gene2259;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS11325;old_locus_tag=YPZ3_1897 NC_014029.1 Protein Homology CDS 2438002 2438448 . + 0 ID=cds2223;Parent=gene2259;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11 NC_014029.1 RefSeq gene 2438445 2439797 . + . ID=gene2260;Name=YPZ3_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11330;old_locus_tag=YPZ3_1898 NC_014029.1 Protein Homology CDS 2438445 2439797 . + 0 ID=cds2224;Parent=gene2260;Dbxref=Genbank:WP_002211138.1;Name=WP_002211138.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_002211138.1;transl_table=11 NC_014029.1 RefSeq gene 2440064 2440534 . + . ID=gene2261;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YPZ3_RS11335;old_locus_tag=YPZ3_1899 NC_014029.1 Protein Homology CDS 2440064 2440534 . + 0 ID=cds2225;Parent=gene2261;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11 NC_014029.1 RefSeq gene 2440540 2441541 . + . ID=gene2262;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YPZ3_RS11340;old_locus_tag=YPZ3_1900 NC_014029.1 Protein Homology CDS 2440540 2441541 . + 0 ID=cds2226;Parent=gene2262;Dbxref=Genbank:WP_002211135.1;Name=WP_002211135.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11 NC_014029.1 RefSeq gene 2441538 2441954 . + . ID=gene2263;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPZ3_RS11345;old_locus_tag=YPZ3_1901 NC_014029.1 Protein Homology CDS 2441538 2441954 . + 0 ID=cds2227;Parent=gene2263;Dbxref=Genbank:WP_002211134.1;Name=WP_002211134.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_002211134.1;transl_table=11 NC_014029.1 RefSeq gene 2441954 2442490 . + . ID=gene2264;Name=YPZ3_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11350;old_locus_tag=YPZ3_1902 NC_014029.1 Protein Homology CDS 2441954 2442490 . + 0 ID=cds2228;Parent=gene2264;Dbxref=Genbank:WP_002211133.1;Name=WP_002211133.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_002211133.1;transl_table=11 NC_014029.1 RefSeq gene 2442571 2443311 . + . ID=gene2265;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPZ3_RS11355;old_locus_tag=YPZ3_1903 NC_014029.1 Protein Homology CDS 2442571 2443311 . + 0 ID=cds2229;Parent=gene2265;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11 NC_014029.1 RefSeq gene 2443417 2443687 . + . ID=gene2266;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=pseudogene;locus_tag=YPZ3_RS11360;pseudo=true NC_014029.1 Protein Homology CDS 2443417 2443687 . + 0 ID=cds2230;Parent=gene2266;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2443690 2444472 . + . ID=gene2267;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YPZ3_RS11365;old_locus_tag=YPZ3_1904 NC_014029.1 Protein Homology CDS 2443690 2444472 . + 0 ID=cds2231;Parent=gene2267;Dbxref=Genbank:WP_002211130.1;Name=WP_002211130.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_002211130.1;transl_table=11 NC_014029.1 RefSeq gene 2444679 2444861 . + . ID=gene2268;Name=YPZ3_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11370 NC_014029.1 Protein Homology CDS 2444679 2444861 . + 0 ID=cds2232;Parent=gene2268;Dbxref=Genbank:WP_002214976.1;Name=WP_002214976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214976.1;transl_table=11 NC_014029.1 RefSeq gene 2444906 2445325 . + . ID=gene2269;Name=YPZ3_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11375;old_locus_tag=YPZ3_1905 NC_014029.1 Protein Homology CDS 2444906 2445325 . + 0 ID=cds2233;Parent=gene2269;Dbxref=Genbank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211129.1;transl_table=11 NC_014029.1 RefSeq gene 2445583 2446542 . - . ID=gene2270;Name=YPZ3_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11380;old_locus_tag=YPZ3_1906 NC_014029.1 Protein Homology CDS 2445583 2446542 . - 0 ID=cds2234;Parent=gene2270;Dbxref=Genbank:WP_002211128.1;Name=WP_002211128.1;gbkey=CDS;product=kinase pfkB family;protein_id=WP_002211128.1;transl_table=11 NC_014029.1 RefSeq gene 2446591 2447613 . - . ID=gene2271;Name=YPZ3_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11385;old_locus_tag=YPZ3_1907 NC_014029.1 Protein Homology CDS 2446591 2447613 . - 0 ID=cds2235;Parent=gene2271;Dbxref=Genbank:WP_002214974.1;Name=WP_002214974.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002214974.1;transl_table=11 NC_014029.1 RefSeq gene 2447616 2449193 . - . ID=gene2272;Name=YPZ3_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11390;old_locus_tag=YPZ3_1908 NC_014029.1 Protein Homology CDS 2447616 2449193 . - 0 ID=cds2236;Parent=gene2272;Dbxref=Genbank:WP_002211126.1;Name=WP_002211126.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002211126.1;transl_table=11 NC_014029.1 RefSeq gene 2449259 2450254 . - . ID=gene2273;Name=YPZ3_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11395;old_locus_tag=YPZ3_1909 NC_014029.1 Protein Homology CDS 2449259 2450254 . - 0 ID=cds2237;Parent=gene2273;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11 NC_014029.1 RefSeq gene 2450297 2451376 . - . ID=gene2274;Name=YPZ3_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11400;old_locus_tag=YPZ3_1910 NC_014029.1 Protein Homology CDS 2450297 2451376 . - 0 ID=cds2238;Parent=gene2274;Dbxref=Genbank:WP_002211124.1;Name=WP_002211124.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211124.1;transl_table=11 NC_014029.1 RefSeq gene 2451506 2453572 . - . ID=gene2275;Name=YPZ3_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11405;old_locus_tag=YPZ3_1911 NC_014029.1 Protein Homology CDS 2451506 2453572 . - 0 ID=cds2239;Parent=gene2275;Dbxref=Genbank:WP_002211122.1;Name=WP_002211122.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002211122.1;transl_table=11 NC_014029.1 RefSeq gene 2453790 2454791 . + . ID=gene2276;Name=YPZ3_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11410;old_locus_tag=YPZ3_1912 NC_014029.1 Protein Homology CDS 2453790 2454791 . + 0 ID=cds2240;Parent=gene2276;Dbxref=Genbank:WP_002211121.1;Name=WP_002211121.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NC_014029.1 RefSeq gene 2454820 2455800 . - . ID=gene2277;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPZ3_RS11415;old_locus_tag=YPZ3_1913 NC_014029.1 Protein Homology CDS 2454820 2455800 . - 0 ID=cds2241;Parent=gene2277;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NC_014029.1 RefSeq gene 2455939 2457603 . - . ID=gene2278;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPZ3_RS11420;old_locus_tag=YPZ3_1914 NC_014029.1 Protein Homology CDS 2455939 2457603 . - 0 ID=cds2242;Parent=gene2278;Dbxref=Genbank:WP_002211119.1;Name=WP_002211119.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211119.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2457771 2458465 . + . ID=id176;gbkey=repeat_region NC_014029.1 RefSeq gene 2458474 2459418 . - . ID=gene2279;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS11425;old_locus_tag=YPZ3_1915 NC_014029.1 Protein Homology CDS 2458474 2459418 . - 0 ID=cds2243;Parent=gene2279;Dbxref=Genbank:WP_002211118.1;Name=WP_002211118.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_002211118.1;transl_table=11 NC_014029.1 RefSeq gene 2459418 2460527 . - . ID=gene2280;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=YPZ3_RS11430;old_locus_tag=YPZ3_1916 NC_014029.1 Protein Homology CDS 2459418 2460527 . - 0 ID=cds2244;Parent=gene2280;Dbxref=Genbank:WP_002211117.1;Name=WP_002211117.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=WP_002211117.1;transl_table=11 NC_014029.1 RefSeq gene 2460542 2461273 . - . ID=gene2281;Name=YPZ3_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11435;old_locus_tag=YPZ3_1917 NC_014029.1 Protein Homology CDS 2460542 2461273 . - 0 ID=cds2245;Parent=gene2281;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11 NC_014029.1 RefSeq gene 2461375 2462100 . - . ID=gene2282;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=YPZ3_RS11440;old_locus_tag=YPZ3_1918;pseudo=true NC_014029.1 Protein Homology CDS 2461375 2462100 . - 0 ID=cds2246;Parent=gene2282;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar biosynthesis protein FlgG;pseudo=true;transl_except=(pos:complement(2462086..2462088)%2Caa:Other);transl_table=11 NC_014029.1 RefSeq gene 2462054 2462683 . - . ID=gene2283;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=YPZ3_RS11445;old_locus_tag=YPZ3_1919 NC_014029.1 Protein Homology CDS 2462054 2462683 . - 0 ID=cds2247;Parent=gene2283;Dbxref=Genbank:WP_002211114.1;Name=WP_002211114.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_002211114.1;transl_table=11 NC_014029.1 RefSeq gene 2462705 2463991 . - . ID=gene2284;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPZ3_RS11450;old_locus_tag=YPZ3_1920 NC_014029.1 Protein Homology CDS 2462705 2463991 . - 0 ID=cds2248;Parent=gene2284;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NC_014029.1 RefSeq gene 2464193 2464870 . - . ID=gene2285;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPZ3_RS11455;old_locus_tag=YPZ3_1921 NC_014029.1 Protein Homology CDS 2464193 2464870 . - 0 ID=cds2249;Parent=gene2285;Dbxref=Genbank:WP_002211112.1;Name=WP_002211112.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_002211112.1;transl_table=11 NC_014029.1 RefSeq gene 2464885 2465289 . - . ID=gene2286;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPZ3_RS11460;old_locus_tag=YPZ3_1922 NC_014029.1 Protein Homology CDS 2464885 2465289 . - 0 ID=cds2250;Parent=gene2286;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NC_014029.1 RefSeq gene 2465295 2465708 . - . ID=gene2287;Name=YPZ3_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11465;old_locus_tag=YPZ3_1923 NC_014029.1 Protein Homology CDS 2465295 2465708 . - 0 ID=cds2251;Parent=gene2287;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11 NC_014029.1 RefSeq gene 2465947 2466645 . + . ID=gene2288;Name=YPZ3_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11470;old_locus_tag=YPZ3_1924 NC_014029.1 Protein Homology CDS 2465947 2466645 . + 0 ID=cds2252;Parent=gene2288;Dbxref=Genbank:WP_002227966.1;Name=WP_002227966.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002227966.1;transl_table=11 NC_014029.1 RefSeq gene 2466796 2467098 . + . ID=gene2289;Name=YPZ3_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11475;old_locus_tag=YPZ3_1925 NC_014029.1 Protein Homology CDS 2466796 2467098 . + 0 ID=cds2253;Parent=gene2289;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11 NC_014029.1 RefSeq gene 2467117 2467557 . + . ID=gene2290;Name=YPZ3_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11480;old_locus_tag=YPZ3_1926 NC_014029.1 Protein Homology CDS 2467117 2467557 . + 0 ID=cds2254;Parent=gene2290;Dbxref=Genbank:WP_002211107.1;Name=WP_002211107.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagellar synthesis protein FlgN;protein_id=WP_002211107.1;transl_table=11 NC_014029.1 RefSeq gene 2467747 2469819 . - . ID=gene2291;Name=YPZ3_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11485;old_locus_tag=YPZ3_1927 NC_014029.1 Protein Homology CDS 2467747 2469819 . - 0 ID=cds2255;Parent=gene2291;Dbxref=Genbank:WP_002211106.1;Name=WP_002211106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211106.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2469796 2470517 . + . ID=id177;gbkey=repeat_region NC_014029.1 RefSeq gene 2469909 2470367 . - . ID=gene2292;Name=YPZ3_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11490;old_locus_tag=YPZ3_1928 NC_014029.1 Protein Homology CDS 2469909 2470367 . - 0 ID=cds2256;Parent=gene2292;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 2470357 2471361 . - . ID=gene2293;Name=YPZ3_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11495 NC_014029.1 Protein Homology CDS 2470357 2471361 . - 0 ID=cds2257;Parent=gene2293;Dbxref=Genbank:WP_011566188.1;Name=WP_011566188.1;gbkey=CDS;product=invasin;protein_id=WP_011566188.1;transl_table=11 NC_014029.1 RefSeq gene 2472025 2472447 . - . ID=gene2294;Name=YPZ3_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11500;old_locus_tag=YPZ3_1929 NC_014029.1 Protein Homology CDS 2472025 2472447 . - 0 ID=cds2258;Parent=gene2294;Dbxref=Genbank:WP_002211101.1;Name=WP_002211101.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_002211101.1;transl_table=11 NC_014029.1 RefSeq gene 2472447 2474525 . - . ID=gene2295;Name=YPZ3_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11505;old_locus_tag=YPZ3_1930 NC_014029.1 Protein Homology CDS 2472447 2474525 . - 0 ID=cds2259;Parent=gene2295;Dbxref=Genbank:WP_002211100.1;Name=WP_002211100.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_002211100.1;transl_table=11 NC_014029.1 RefSeq gene 2474525 2475685 . - . ID=gene2296;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YPZ3_RS11510;old_locus_tag=YPZ3_1931 NC_014029.1 Protein Homology CDS 2474525 2475685 . - 0 ID=cds2260;Parent=gene2296;Dbxref=Genbank:WP_002211099.1;Name=WP_002211099.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11 NC_014029.1 RefSeq gene 2476217 2476675 . + . ID=gene2297;Name=YPZ3_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11515;old_locus_tag=YPZ3_1932 NC_014029.1 Protein Homology CDS 2476217 2476675 . + 0 ID=cds2261;Parent=gene2297;Dbxref=Genbank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211098.1;transl_table=11 NC_014029.1 RefSeq gene 2476669 2476995 . + . ID=gene2298;Name=YPZ3_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11520;old_locus_tag=YPZ3_1933 NC_014029.1 Protein Homology CDS 2476669 2476995 . + 0 ID=cds2262;Parent=gene2298;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11 NC_014029.1 RefSeq gene 2477008 2477238 . - . ID=gene2299;Name=YPZ3_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11525 NC_014029.1 Protein Homology CDS 2477008 2477238 . - 0 ID=cds2263;Parent=gene2299;Dbxref=Genbank:WP_002218131.1;Name=WP_002218131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218131.1;transl_table=11 NC_014029.1 RefSeq gene 2477518 2477859 . - . ID=gene2300;Name=YPZ3_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11530;old_locus_tag=YPZ3_1934 NC_014029.1 Protein Homology CDS 2477518 2477859 . - 0 ID=cds2264;Parent=gene2300;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11 NC_014029.1 RefSeq gene 2477956 2478840 . - . ID=gene2301;Name=YPZ3_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11535;old_locus_tag=YPZ3_1935 NC_014029.1 Protein Homology CDS 2477956 2478840 . - 0 ID=cds2265;Parent=gene2301;Dbxref=Genbank:WP_002211094.1;Name=WP_002211094.1;gbkey=CDS;product=copper resistance protein D;protein_id=WP_002211094.1;transl_table=11 NC_014029.1 RefSeq gene 2478843 2479229 . - . ID=gene2302;Name=YPZ3_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11540;old_locus_tag=YPZ3_1936 NC_014029.1 Protein Homology CDS 2478843 2479229 . - 0 ID=cds2266;Parent=gene2302;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11 NC_014029.1 RefSeq gene 2479626 2480135 . - . ID=gene2303;Name=YPZ3_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11545;old_locus_tag=YPZ3_1937 NC_014029.1 Protein Homology CDS 2479626 2480135 . - 0 ID=cds2267;Parent=gene2303;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11 NC_014029.1 RefSeq gene 2480536 2480766 . + . ID=gene2304;Name=YPZ3_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11550 NC_014029.1 Protein Homology CDS 2480536 2480766 . + 0 ID=cds2268;Parent=gene2304;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NC_014029.1 RefSeq gene 2480826 2481776 . - . ID=gene2305;Name=YPZ3_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11555;old_locus_tag=YPZ3_1938 NC_014029.1 Protein Homology CDS 2480826 2481776 . - 0 ID=cds2269;Parent=gene2305;Dbxref=Genbank:WP_002211090.1;Name=WP_002211090.1;gbkey=CDS;product=proline iminopeptidase;protein_id=WP_002211090.1;transl_table=11 NC_014029.1 RefSeq gene 2482498 2484549 . - . ID=gene2306;Name=YPZ3_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11560;old_locus_tag=YPZ3_1939 NC_014029.1 Protein Homology CDS 2482498 2484549 . - 0 ID=cds2270;Parent=gene2306;Dbxref=Genbank:WP_002211088.1;Name=WP_002211088.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=oligopeptidase B;protein_id=WP_002211088.1;transl_table=11 NC_014029.1 RefSeq gene 2484859 2485284 . - . ID=gene2307;Name=YPZ3_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11565;old_locus_tag=YPZ3_1940 NC_014029.1 Protein Homology CDS 2484859 2485284 . - 0 ID=cds2271;Parent=gene2307;Dbxref=Genbank:WP_002211087.1;Name=WP_002211087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211087.1;transl_table=11 NC_014029.1 RefSeq gene 2485376 2485684 . - . ID=gene2308;Name=YPZ3_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11570;old_locus_tag=YPZ3_1941 NC_014029.1 Protein Homology CDS 2485376 2485684 . - 0 ID=cds2272;Parent=gene2308;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11 NC_014029.1 RefSeq gene 2485724 2486044 . - . ID=gene2309;Name=YPZ3_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11575;old_locus_tag=YPZ3_1942 NC_014029.1 Protein Homology CDS 2485724 2486044 . - 0 ID=cds2273;Parent=gene2309;Dbxref=Genbank:WP_002211085.1;Name=WP_002211085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211085.1;transl_table=11 NC_014029.1 RefSeq gene 2486138 2487520 . - . ID=gene2310;Name=YPZ3_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11580;old_locus_tag=YPZ3_1943 NC_014029.1 Protein Homology CDS 2486138 2487520 . - 0 ID=cds2274;Parent=gene2310;Dbxref=Genbank:WP_002211084.1;Name=WP_002211084.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_002211084.1;transl_table=11 NC_014029.1 RefSeq gene 2487833 2489014 . + . ID=gene2311;Name=YPZ3_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11585;old_locus_tag=YPZ3_1944 NC_014029.1 Protein Homology CDS 2487833 2489014 . + 0 ID=cds2275;Parent=gene2311;Dbxref=Genbank:WP_002211083.1;Name=WP_002211083.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_002211083.1;transl_table=11 NC_014029.1 RefSeq gene 2489140 2489397 . - . ID=gene2312;Name=YPZ3_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11590 NC_014029.1 Protein Homology CDS 2489140 2489397 . - 0 ID=cds2276;Parent=gene2312;Dbxref=Genbank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211082.1;transl_table=11 NC_014029.1 RefSeq gene 2489562 2490938 . + . ID=gene2313;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YPZ3_RS11595;old_locus_tag=YPZ3_1945 NC_014029.1 Protein Homology CDS 2489562 2490938 . + 0 ID=cds2277;Parent=gene2313;Dbxref=Genbank:WP_002211081.1;Name=WP_002211081.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase subunit I;protein_id=WP_002211081.1;transl_table=11 NC_014029.1 RefSeq gene 2490935 2491534 . + . ID=gene2314;Name=YPZ3_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11600;old_locus_tag=YPZ3_1946 NC_014029.1 Protein Homology CDS 2490935 2491534 . + 0 ID=cds2278;Parent=gene2314;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11 NC_014029.1 RefSeq gene 2492242 2493606 . + . ID=gene2315;Name=YPZ3_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11605;old_locus_tag=YPZ3_1947 NC_014029.1 Protein Homology CDS 2492242 2493606 . + 0 ID=cds2279;Parent=gene2315;Dbxref=Genbank:WP_002211079.1;Name=WP_002211079.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_002211079.1;transl_table=11 NC_014029.1 RefSeq gene 2493886 2494383 . - . ID=gene2316;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YPZ3_RS11610;old_locus_tag=YPZ3_1948 NC_014029.1 Protein Homology CDS 2493886 2494383 . - 0 ID=cds2280;Parent=gene2316;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11 NC_014029.1 RefSeq gene 2494404 2495966 . - . ID=gene2317;Name=YPZ3_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11615;old_locus_tag=YPZ3_1949 NC_014029.1 Protein Homology CDS 2494404 2495966 . - 0 ID=cds2281;Parent=gene2317;Dbxref=Genbank:WP_002211077.1;Name=WP_002211077.1;gbkey=CDS;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211077.1;transl_table=11 NC_014029.1 RefSeq gene 2496034 2497401 . - . ID=gene2318;Name=YPZ3_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11620;old_locus_tag=YPZ3_1950 NC_014029.1 Protein Homology CDS 2496034 2497401 . - 0 ID=cds2282;Parent=gene2318;Dbxref=Genbank:WP_002211076.1;Name=WP_002211076.1;gbkey=CDS;product=4-hydroxyphenylacetate permease;protein_id=WP_002211076.1;transl_table=11 NC_014029.1 RefSeq gene 2497427 2498233 . - . ID=gene2319;Name=YPZ3_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11625;old_locus_tag=YPZ3_1951 NC_014029.1 Protein Homology CDS 2497427 2498233 . - 0 ID=cds2283;Parent=gene2319;Dbxref=Genbank:WP_002211075.1;Name=WP_002211075.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002211075.1;transl_table=11 NC_014029.1 RefSeq gene 2498244 2499047 . - . ID=gene2320;Name=YPZ3_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11630;old_locus_tag=YPZ3_1952 NC_014029.1 Protein Homology CDS 2498244 2499047 . - 0 ID=cds2284;Parent=gene2320;Dbxref=Genbank:WP_002211074.1;Name=WP_002211074.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_002211074.1;transl_table=11 NC_014029.1 RefSeq gene 2499041 2499439 . - . ID=gene2321;Name=YPZ3_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11635;old_locus_tag=YPZ3_1953 NC_014029.1 Protein Homology CDS 2499041 2499439 . - 0 ID=cds2285;Parent=gene2321;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11 NC_014029.1 RefSeq gene 2499464 2500321 . - . ID=gene2322;Name=YPZ3_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11640;old_locus_tag=YPZ3_1954 NC_014029.1 Protein Homology CDS 2499464 2500321 . - 0 ID=cds2286;Parent=gene2322;Dbxref=Genbank:WP_002211072.1;Name=WP_002211072.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11 NC_014029.1 RefSeq gene 2500440 2501837 . - . ID=gene2323;Name=YPZ3_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11645;old_locus_tag=YPZ3_1955 NC_014029.1 Protein Homology CDS 2500440 2501837 . - 0 ID=cds2287;Parent=gene2323;Dbxref=Genbank:WP_002211071.1;Name=WP_002211071.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_002211071.1;transl_table=11 NC_014029.1 RefSeq gene 2501834 2502598 . - . ID=gene2324;Name=YPZ3_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11650;old_locus_tag=YPZ3_1956 NC_014029.1 Protein Homology CDS 2501834 2502598 . - 0 ID=cds2288;Parent=gene2324;Dbxref=Genbank:WP_002214882.1;Name=WP_002214882.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214882.1;transl_table=11 NC_014029.1 RefSeq gene 2502595 2503227 . - . ID=gene2325;Name=YPZ3_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11655;old_locus_tag=YPZ3_1957 NC_014029.1 Protein Homology CDS 2502595 2503227 . - 0 ID=cds2289;Parent=gene2325;Dbxref=Genbank:WP_002214880.1;Name=WP_002214880.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214880.1;transl_table=11 NC_014029.1 RefSeq gene 2503611 2504078 . + . ID=gene2326;Name=YPZ3_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11660;old_locus_tag=YPZ3_1958 NC_014029.1 Protein Homology CDS 2503611 2504078 . + 0 ID=cds2290;Parent=gene2326;Dbxref=Genbank:WP_002211070.1;Name=WP_002211070.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_002211070.1;transl_table=11 NC_014029.1 RefSeq gene 2504180 2505556 . - . ID=gene2327;Name=YPZ3_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11665;old_locus_tag=YPZ3_1959 NC_014029.1 Protein Homology CDS 2504180 2505556 . - 0 ID=cds2291;Parent=gene2327;Dbxref=Genbank:WP_002358805.1;Name=WP_002358805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002358805.1;transl_table=11 NC_014029.1 RefSeq gene 2506345 2507319 . + . ID=gene2328;Name=YPZ3_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11670;old_locus_tag=YPZ3_1960 NC_014029.1 Protein Homology CDS 2506345 2507319 . + 0 ID=cds2292;Parent=gene2328;Dbxref=Genbank:WP_002211069.1;Name=WP_002211069.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NC_014029.1 RefSeq gene 2507411 2508208 . + . ID=gene2329;Name=YPZ3_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11675;old_locus_tag=YPZ3_1961 NC_014029.1 Protein Homology CDS 2507411 2508208 . + 0 ID=cds2293;Parent=gene2329;Dbxref=Genbank:WP_002211068.1;Name=WP_002211068.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NC_014029.1 RefSeq gene 2508224 2509102 . + . ID=gene2330;Name=YPZ3_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11680;old_locus_tag=YPZ3_1962 NC_014029.1 Protein Homology CDS 2508224 2509102 . + 0 ID=cds2294;Parent=gene2330;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NC_014029.1 RefSeq gene 2509302 2509763 . + . ID=gene2331;Name=YPZ3_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11685;old_locus_tag=YPZ3_1963 NC_014029.1 Protein Homology CDS 2509302 2509763 . + 0 ID=cds2295;Parent=gene2331;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11 NC_014029.1 RefSeq gene 2510192 2510761 . + . ID=gene2332;Name=YPZ3_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11690;old_locus_tag=YPZ3_1964 NC_014029.1 Protein Homology CDS 2510192 2510761 . + 0 ID=cds2296;Parent=gene2332;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11 NC_014029.1 RefSeq gene 2510922 2513135 . - . ID=gene2333;Name=YPZ3_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11695;old_locus_tag=YPZ3_1965 NC_014029.1 Protein Homology CDS 2510922 2513135 . - 0 ID=cds2297;Parent=gene2333;Dbxref=Genbank:WP_002211064.1;Name=WP_002211064.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211064.1;transl_table=11 NC_014029.1 RefSeq gene 2513557 2515638 . + . ID=gene2334;Name=YPZ3_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11700;old_locus_tag=YPZ3_1966 NC_014029.1 Protein Homology CDS 2513557 2515638 . + 0 ID=cds2298;Parent=gene2334;Dbxref=Genbank:WP_002211063.1;Name=WP_002211063.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211063.1;transl_table=11 NC_014029.1 RefSeq gene 2515860 2516138 . + . ID=gene2335;Name=YPZ3_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11705 NC_014029.1 Protein Homology CDS 2515860 2516138 . + 0 ID=cds2299;Parent=gene2335;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NC_014029.1 RefSeq gene 2516360 2517199 . - . ID=gene2336;Name=YPZ3_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11710;old_locus_tag=YPZ3_1967 NC_014029.1 Protein Homology CDS 2516360 2517199 . - 0 ID=cds2300;Parent=gene2336;Dbxref=Genbank:WP_002211061.1;Name=WP_002211061.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_002211061.1;transl_table=11 NC_014029.1 RefSeq gene 2517594 2518349 . + . ID=gene2337;Name=YPZ3_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11715;old_locus_tag=YPZ3_1968 NC_014029.1 Protein Homology CDS 2517594 2518349 . + 0 ID=cds2301;Parent=gene2337;Dbxref=Genbank:WP_002211060.1;Name=WP_002211060.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_002211060.1;transl_table=11 NC_014029.1 cmsearch region 2518397 2518825 . - . ID=id178;Note=cspA;gbkey=misc_feature NC_014029.1 RefSeq gene 2518440 2518649 . - . ID=gene2338;Name=YPZ3_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11720 NC_014029.1 Protein Homology CDS 2518440 2518649 . - 0 ID=cds2302;Parent=gene2338;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11 NC_014029.1 RefSeq gene 2518692 2518808 . - . ID=gene2339;Name=YPZ3_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11725 NC_014029.1 Protein Homology CDS 2518692 2518808 . - 0 ID=cds2303;Parent=gene2339;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11 NC_014029.1 RefSeq gene 2519574 2519795 . - . ID=gene2340;Name=YPZ3_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11730 NC_014029.1 Protein Homology CDS 2519574 2519795 . - 0 ID=cds2304;Parent=gene2340;Dbxref=Genbank:WP_002430102.1;Name=WP_002430102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430102.1;transl_table=11 NC_014029.1 RefSeq gene 2519810 2520409 . + . ID=gene2341;Name=YPZ3_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11735;old_locus_tag=YPZ3_1969 NC_014029.1 Protein Homology CDS 2519810 2520409 . + 0 ID=cds2305;Parent=gene2341;Dbxref=Genbank:WP_002221007.1;Name=WP_002221007.1;gbkey=CDS;product=lipid A palmitoyltransferase PagP;protein_id=WP_002221007.1;transl_table=11 NC_014029.1 RefSeq gene 2520714 2522087 . - . ID=gene2342;Name=YPZ3_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11740;old_locus_tag=YPZ3_1970 NC_014029.1 Protein Homology CDS 2520714 2522087 . - 0 ID=cds2306;Parent=gene2342;Dbxref=Genbank:WP_002211055.1;Name=WP_002211055.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002211055.1;transl_table=11 NC_014029.1 RefSeq gene 2522324 2522569 . - . ID=gene2343;Name=YPZ3_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11745 NC_014029.1 Protein Homology CDS 2522324 2522569 . - 0 ID=cds2307;Parent=gene2343;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11 NC_014029.1 RefSeq gene 2522678 2522977 . - . ID=gene2344;Name=YPZ3_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11750 NC_014029.1 Protein Homology CDS 2522678 2522977 . - 0 ID=cds2308;Parent=gene2344;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11 NC_014029.1 RefSeq gene 2523240 2523515 . - . ID=gene2345;Name=YPZ3_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11755 NC_014029.1 Protein Homology CDS 2523240 2523515 . - 0 ID=cds2309;Parent=gene2345;Dbxref=Genbank:WP_002216495.1;Name=WP_002216495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216495.1;transl_table=11 NC_014029.1 RefSeq gene 2524098 2524331 . + . ID=gene2346;Name=YPZ3_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11760 NC_014029.1 Protein Homology CDS 2524098 2524331 . + 0 ID=cds2310;Parent=gene2346;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11 NC_014029.1 RefSeq gene 2524422 2524661 . - . ID=gene2347;Name=YPZ3_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11765 NC_014029.1 Protein Homology CDS 2524422 2524661 . - 0 ID=cds2311;Parent=gene2347;Dbxref=Genbank:WP_002211050.1;Name=WP_002211050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211050.1;transl_table=11 NC_014029.1 RefSeq gene 2524873 2524986 . - . ID=gene2348;Name=YPZ3_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11770 NC_014029.1 Protein Homology CDS 2524873 2524986 . - 0 ID=cds2312;Parent=gene2348;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11 NC_014029.1 RefSeq gene 2525217 2525603 . + . ID=gene2349;Name=YPZ3_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11775;old_locus_tag=YPZ3_1971 NC_014029.1 Protein Homology CDS 2525217 2525603 . + 0 ID=cds2313;Parent=gene2349;Dbxref=Genbank:WP_002211048.1;Name=WP_002211048.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211048.1;transl_table=11 NC_014029.1 RefSeq gene 2525685 2525849 . - . ID=gene2350;Name=YPZ3_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11780 NC_014029.1 Protein Homology CDS 2525685 2525849 . - 0 ID=cds2314;Parent=gene2350;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11 NC_014029.1 RefSeq gene 2526505 2528223 . + . ID=gene2351;Name=YPZ3_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11785;old_locus_tag=YPZ3_1972 NC_014029.1 Protein Homology CDS 2526505 2528223 . + 0 ID=cds2315;Parent=gene2351;Dbxref=Genbank:WP_002211045.1;Name=WP_002211045.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11 NC_014029.1 RefSeq gene 2528326 2529177 . + . ID=gene2352;Name=YPZ3_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11790;old_locus_tag=YPZ3_1973 NC_014029.1 Protein Homology CDS 2528326 2529177 . + 0 ID=cds2316;Parent=gene2352;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11 NC_014029.1 RefSeq gene 2529414 2529698 . + . ID=gene2353;Name=YPZ3_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11795 NC_014029.1 Protein Homology CDS 2529414 2529698 . + 0 ID=cds2317;Parent=gene2353;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11 NC_014029.1 RefSeq gene 2530088 2530900 . + . ID=gene2354;Name=YPZ3_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11800;old_locus_tag=YPZ3_1974 NC_014029.1 Protein Homology CDS 2530088 2530900 . + 0 ID=cds2318;Parent=gene2354;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11 NC_014029.1 RefSeq gene 2531078 2531153 . + . ID=gene2355;Name=YPZ3_RS11805;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS11805;old_locus_tag=YPZ3_t29 NC_014029.1 tRNAscan-SE tRNA 2531078 2531153 . + . ID=rna34;Parent=gene2355;anticodon=(pos:2531111..2531113);gbkey=tRNA;product=tRNA-Asn NC_014029.1 tRNAscan-SE exon 2531078 2531153 . + . ID=id179;Parent=rna34;anticodon=(pos:2531111..2531113);gbkey=tRNA;product=tRNA-Asn NC_014029.1 RefSeq gene 2531296 2531553 . - . ID=gene2356;Name=YPZ3_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11810 NC_014029.1 Protein Homology CDS 2531296 2531553 . - 0 ID=cds2319;Parent=gene2356;Dbxref=Genbank:WP_002224323.1;Name=WP_002224323.1;gbkey=CDS;product=ThuR%2C regulatory protein for trehalosemaltose transport;protein_id=WP_002224323.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2531500 2533459 . + . ID=id180;gbkey=repeat_region NC_014029.1 RefSeq gene 2531569 2532348 . - . ID=gene2357;Name=YPZ3_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11815;old_locus_tag=YPZ3_1975 NC_014029.1 Protein Homology CDS 2531569 2532348 . - 0 ID=cds2320;Parent=gene2357;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 2532348 2533370 . - . ID=gene2358;Name=YPZ3_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11820;old_locus_tag=YPZ3_1976 NC_014029.1 Protein Homology CDS 2532348 2533370 . - 0 ID=cds2321;Parent=gene2358;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 2533384 2534271 . - . ID=gene2359;Name=YPZ3_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11825;old_locus_tag=YPZ3_1977 NC_014029.1 Protein Homology CDS 2533384 2534271 . - 0 ID=cds2322;Parent=gene2359;Dbxref=Genbank:WP_002216469.1;Name=WP_002216469.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216469.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2534704 2536029 . + . ID=id181;gbkey=repeat_region NC_014029.1 RefSeq gene 2534746 2535954 . - . ID=gene2360;Name=YPZ3_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11830;old_locus_tag=YPZ3_1978 NC_014029.1 Protein Homology CDS 2534746 2535954 . - 0 ID=cds2323;Parent=gene2360;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2536002 2536352 . - . ID=gene2361;Name=YPZ3_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11835;old_locus_tag=YPZ3_1979 NC_014029.1 Protein Homology CDS 2536002 2536352 . - 0 ID=cds2324;Parent=gene2361;Dbxref=Genbank:WP_002210828.1;Name=WP_002210828.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_002210828.1;transl_table=11 NC_014029.1 RefSeq gene 2536688 2537524 . + . ID=gene2362;Name=YPZ3_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11840;old_locus_tag=YPZ3_1980 NC_014029.1 Protein Homology CDS 2536688 2537524 . + 0 ID=cds2325;Parent=gene2362;Dbxref=Genbank:WP_002210829.1;Name=WP_002210829.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_002210829.1;transl_table=11 NC_014029.1 RefSeq gene 2537616 2538377 . + . ID=gene2363;Name=YPZ3_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11845;old_locus_tag=YPZ3_1981 NC_014029.1 Protein Homology CDS 2537616 2538377 . + 0 ID=cds2326;Parent=gene2363;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11 NC_014029.1 RefSeq gene 2538713 2540380 . + . ID=gene2364;Name=YPZ3_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11850;old_locus_tag=YPZ3_1982 NC_014029.1 Protein Homology CDS 2538713 2540380 . + 0 ID=cds2327;Parent=gene2364;Dbxref=Genbank:WP_002210831.1;Name=WP_002210831.1;gbkey=CDS;product=pectate disaccharide-lyase;protein_id=WP_002210831.1;transl_table=11 NC_014029.1 RefSeq gene 2540421 2541311 . + . ID=gene2365;Name=YPZ3_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11855;old_locus_tag=YPZ3_1983 NC_014029.1 Protein Homology CDS 2540421 2541311 . + 0 ID=cds2328;Parent=gene2365;Dbxref=Genbank:WP_002210832.1;Name=WP_002210832.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NC_014029.1 RefSeq gene 2541304 2542224 . + . ID=gene2366;Name=YPZ3_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11860;old_locus_tag=YPZ3_1984 NC_014029.1 Protein Homology CDS 2541304 2542224 . + 0 ID=cds2329;Parent=gene2366;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NC_014029.1 RefSeq gene 2542238 2543365 . + . ID=gene2367;Name=YPZ3_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11865;old_locus_tag=YPZ3_1985 NC_014029.1 Protein Homology CDS 2542238 2543365 . + 0 ID=cds2330;Parent=gene2367;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NC_014029.1 RefSeq gene 2543381 2544673 . + . ID=gene2368;Name=YPZ3_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11870;old_locus_tag=YPZ3_1986 NC_014029.1 Protein Homology CDS 2543381 2544673 . + 0 ID=cds2331;Parent=gene2368;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NC_014029.1 RefSeq gene 2544971 2545681 . + . ID=gene2369;Name=YPZ3_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11875;old_locus_tag=YPZ3_1987 NC_014029.1 Protein Homology CDS 2544971 2545681 . + 0 ID=cds2332;Parent=gene2369;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11 NC_014029.1 RefSeq gene 2546161 2546709 . + . ID=gene2370;Name=YPZ3_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11880;old_locus_tag=YPZ3_1988 NC_014029.1 Protein Homology CDS 2546161 2546709 . + 0 ID=cds2333;Parent=gene2370;Dbxref=Genbank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210837.1;transl_table=11 NC_014029.1 RefSeq gene 2546913 2548304 . + . ID=gene2371;Name=YPZ3_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11885;old_locus_tag=YPZ3_1989 NC_014029.1 Protein Homology CDS 2546913 2548304 . + 0 ID=cds2334;Parent=gene2371;Dbxref=Genbank:WP_002210838.1;Name=WP_002210838.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_002210838.1;transl_table=11 NC_014029.1 RefSeq gene 2548519 2549370 . - . ID=gene2372;Name=YPZ3_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11890;old_locus_tag=YPZ3_1990 NC_014029.1 Protein Homology CDS 2548519 2549370 . - 0 ID=cds2335;Parent=gene2372;Dbxref=Genbank:WP_002210839.1;Name=WP_002210839.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11 NC_014029.1 RefSeq gene 2549755 2550546 . - . ID=gene2373;Name=YPZ3_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11895;old_locus_tag=YPZ3_1991 NC_014029.1 Protein Homology CDS 2549755 2550546 . - 0 ID=cds2336;Parent=gene2373;Dbxref=Genbank:WP_002210840.1;Name=WP_002210840.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002210840.1;transl_table=11 NC_014029.1 RefSeq gene 2550733 2551899 . - . ID=gene2374;Name=YPZ3_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11900;old_locus_tag=YPZ3_1992 NC_014029.1 Protein Homology CDS 2550733 2551899 . - 0 ID=cds2337;Parent=gene2374;Dbxref=Genbank:WP_002210841.1;Name=WP_002210841.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_002210841.1;transl_table=11 NC_014029.1 RefSeq gene 2552226 2553593 . + . ID=gene2375;Name=YPZ3_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11905;old_locus_tag=YPZ3_1993 NC_014029.1 Protein Homology CDS 2552226 2553593 . + 0 ID=cds2338;Parent=gene2375;Dbxref=Genbank:WP_002210842.1;Name=WP_002210842.1;gbkey=CDS;product=multidrug MFS transporter;protein_id=WP_002210842.1;transl_table=11 NC_014029.1 RefSeq gene 2553647 2554450 . - . ID=gene2376;Name=YPZ3_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11910;old_locus_tag=YPZ3_1994 NC_014029.1 Protein Homology CDS 2553647 2554450 . - 0 ID=cds2339;Parent=gene2376;Dbxref=Genbank:WP_002210843.1;Name=WP_002210843.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210843.1;transl_table=11 NC_014029.1 RefSeq gene 2554447 2555610 . - . ID=gene2377;Name=YPZ3_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11915;old_locus_tag=YPZ3_1995 NC_014029.1 Protein Homology CDS 2554447 2555610 . - 0 ID=cds2340;Parent=gene2377;Dbxref=Genbank:WP_002215120.1;Name=WP_002215120.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11 NC_014029.1 RefSeq gene 2555607 2558219 . - . ID=gene2378;Name=YPZ3_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11920;old_locus_tag=YPZ3_1996 NC_014029.1 Protein Homology CDS 2555607 2558219 . - 0 ID=cds2341;Parent=gene2378;Dbxref=Genbank:WP_002210844.1;Name=WP_002210844.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210844.1;transl_table=11 NC_014029.1 RefSeq gene 2558301 2558987 . - . ID=gene2379;Name=YPZ3_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11925;old_locus_tag=YPZ3_1997 NC_014029.1 Protein Homology CDS 2558301 2558987 . - 0 ID=cds2342;Parent=gene2379;Dbxref=Genbank:WP_002354110.1;Name=WP_002354110.1;gbkey=CDS;product=fimbrial assembly protein StbE;protein_id=WP_002354110.1;transl_table=11 NC_014029.1 RefSeq gene 2559233 2559775 . - . ID=gene2380;Name=YPZ3_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11930;old_locus_tag=YPZ3_1998 NC_014029.1 Protein Homology CDS 2559233 2559775 . - 0 ID=cds2343;Parent=gene2380;Dbxref=Genbank:WP_002210846.1;Name=WP_002210846.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002210846.1;transl_table=11 NC_014029.1 RefSeq gene 2560433 2561314 . - . ID=gene2381;Name=YPZ3_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11935;old_locus_tag=YPZ3_1999 NC_014029.1 Protein Homology CDS 2560433 2561314 . - 0 ID=cds2344;Parent=gene2381;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NC_014029.1 RefSeq gene 2561788 2563860 . - . ID=gene2382;Name=YPZ3_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11940;old_locus_tag=YPZ3_2000 NC_014029.1 Protein Homology CDS 2561788 2563860 . - 0 ID=cds2345;Parent=gene2382;Dbxref=Genbank:WP_002210848.1;Name=WP_002210848.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_002210848.1;transl_table=11 NC_014029.1 RefSeq gene 2563880 2564593 . - . ID=gene2383;Name=YPZ3_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11945;old_locus_tag=YPZ3_2001 NC_014029.1 Protein Homology CDS 2563880 2564593 . - 0 ID=cds2346;Parent=gene2383;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NC_014029.1 RefSeq gene 2564689 2565186 . - . ID=gene2384;Name=YPZ3_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11950;old_locus_tag=YPZ3_2002 NC_014029.1 Protein Homology CDS 2564689 2565186 . - 0 ID=cds2347;Parent=gene2384;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11 NC_014029.1 RefSeq gene 2565418 2566665 . + . ID=gene2385;Name=YPZ3_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11955;old_locus_tag=YPZ3_2003 NC_014029.1 Protein Homology CDS 2565418 2566665 . + 0 ID=cds2348;Parent=gene2385;Dbxref=Genbank:WP_002367629.1;Name=WP_002367629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002367629.1;transl_table=11 NC_014029.1 RefSeq gene 2566634 2569285 . + . ID=gene2386;Name=YPZ3_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11960;old_locus_tag=YPZ3_2004 NC_014029.1 Protein Homology CDS 2566634 2569285 . + 0 ID=cds2349;Parent=gene2386;Dbxref=Genbank:WP_002216616.1;Name=WP_002216616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216616.1;transl_table=11 NC_014029.1 RefSeq gene 2569764 2570318 . + . ID=gene2387;Name=YPZ3_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11965;old_locus_tag=YPZ3_2005 NC_014029.1 Protein Homology CDS 2569764 2570318 . + 0 ID=cds2350;Parent=gene2387;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11 NC_014029.1 RefSeq gene 2570363 2570854 . + . ID=gene2388;Name=YPZ3_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11970;old_locus_tag=YPZ3_2006 NC_014029.1 Protein Homology CDS 2570363 2570854 . + 0 ID=cds2351;Parent=gene2388;Dbxref=Genbank:WP_002210853.1;Name=WP_002210853.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210853.1;transl_table=11 NC_014029.1 RefSeq gene 2570875 2571432 . + . ID=gene2389;Name=YPZ3_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11975 NC_014029.1 Protein Homology CDS 2570875 2571432 . + 0 ID=cds2352;Parent=gene2389;Dbxref=Genbank:WP_002216611.1;Name=WP_002216611.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002216611.1;transl_table=11 NC_014029.1 RefSeq gene 2571463 2572215 . + . ID=gene2390;Name=YPZ3_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11980;old_locus_tag=YPZ3_2007 NC_014029.1 Protein Homology CDS 2571463 2572215 . + 0 ID=cds2353;Parent=gene2390;Dbxref=Genbank:WP_002210856.1;Name=WP_002210856.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210856.1;transl_table=11 NC_014029.1 RefSeq gene 2572386 2574833 . + . ID=gene2391;Name=YPZ3_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11985;old_locus_tag=YPZ3_2008 NC_014029.1 Protein Homology CDS 2572386 2574833 . + 0 ID=cds2354;Parent=gene2391;Dbxref=Genbank:WP_002210857.1;Name=WP_002210857.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210857.1;transl_table=11 NC_014029.1 RefSeq gene 2575039 2576028 . + . ID=gene2392;Name=YPZ3_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11990;old_locus_tag=YPZ3_2009 NC_014029.1 Protein Homology CDS 2575039 2576028 . + 0 ID=cds2355;Parent=gene2392;Dbxref=Genbank:WP_002210858.1;Name=WP_002210858.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210858.1;transl_table=11 NC_014029.1 RefSeq gene 2576236 2576475 . + . ID=gene2393;Name=YPZ3_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS11995 NC_014029.1 Protein Homology CDS 2576236 2576475 . + 0 ID=cds2356;Parent=gene2393;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11 NC_014029.1 RefSeq gene 2576585 2576974 . - . ID=gene2394;Name=YPZ3_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12000;old_locus_tag=YPZ3_2010 NC_014029.1 Protein Homology CDS 2576585 2576974 . - 0 ID=cds2357;Parent=gene2394;Dbxref=Genbank:WP_002215943.1;Name=WP_002215943.1;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002215943.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2577293 2579250 . + . ID=id182;gbkey=repeat_region NC_014029.1 RefSeq gene 2577381 2578403 . + . ID=gene2395;Name=YPZ3_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12005;old_locus_tag=YPZ3_2011 NC_014029.1 Protein Homology CDS 2577381 2578403 . + 0 ID=cds2358;Parent=gene2395;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 2578403 2579182 . + . ID=gene2396;Name=YPZ3_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12010;old_locus_tag=YPZ3_2012 NC_014029.1 Protein Homology CDS 2578403 2579182 . + 0 ID=cds2359;Parent=gene2396;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 2579757 2579990 . - . ID=gene2397;Name=YPZ3_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12015 NC_014029.1 Protein Homology CDS 2579757 2579990 . - 0 ID=cds2360;Parent=gene2397;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11 NC_014029.1 RefSeq gene 2580145 2581401 . - . ID=gene2398;Name=YPZ3_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12020;old_locus_tag=YPZ3_2013 NC_014029.1 Protein Homology CDS 2580145 2581401 . - 0 ID=cds2361;Parent=gene2398;Dbxref=Genbank:WP_002210864.1;Name=WP_002210864.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210864.1;transl_table=11 NC_014029.1 RefSeq gene 2581794 2582042 . - . ID=gene2399;Name=YPZ3_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12025 NC_014029.1 Protein Homology CDS 2581794 2582042 . - 0 ID=cds2362;Parent=gene2399;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NC_014029.1 RefSeq gene 2582607 2582801 . + . ID=gene2400;Name=YPZ3_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12030 NC_014029.1 Protein Homology CDS 2582607 2582801 . + 0 ID=cds2363;Parent=gene2400;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NC_014029.1 RefSeq gene 2583203 2584432 . + . ID=gene2401;Name=YPZ3_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12035;old_locus_tag=YPZ3_2014 NC_014029.1 Protein Homology CDS 2583203 2584432 . + 0 ID=cds2364;Parent=gene2401;Dbxref=Genbank:WP_002210868.1;Name=WP_002210868.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_002210868.1;transl_table=11 NC_014029.1 RefSeq gene 2585051 2586004 . - . ID=gene2402;Name=YPZ3_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12040;old_locus_tag=YPZ3_2015 NC_014029.1 Protein Homology CDS 2585051 2586004 . - 0 ID=cds2365;Parent=gene2402;Dbxref=Genbank:WP_002210869.1;Name=WP_002210869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210869.1;transl_table=11 NC_014029.1 RefSeq gene 2586104 2586538 . - . ID=gene2403;Name=YPZ3_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12045;old_locus_tag=YPZ3_2016 NC_014029.1 Protein Homology CDS 2586104 2586538 . - 0 ID=cds2366;Parent=gene2403;Dbxref=Genbank:WP_002215939.1;Name=WP_002215939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215939.1;transl_table=11 NC_014029.1 RefSeq gene 2586525 2588618 . - . ID=gene2404;Name=YPZ3_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12050;old_locus_tag=YPZ3_2017 NC_014029.1 Protein Homology CDS 2586525 2588618 . - 0 ID=cds2367;Parent=gene2404;Dbxref=Genbank:WP_002377800.1;Name=WP_002377800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002377800.1;transl_table=11 NC_014029.1 RefSeq gene 2589092 2589856 . - . ID=gene2405;Name=YPZ3_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12055;old_locus_tag=YPZ3_2018 NC_014029.1 Protein Homology CDS 2589092 2589856 . - 0 ID=cds2368;Parent=gene2405;Dbxref=Genbank:WP_002210870.1;Name=WP_002210870.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210870.1;transl_table=11 NC_014029.1 RefSeq gene 2589988 2590107 . + . ID=gene2406;Name=YPZ3_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12060 NC_014029.1 Protein Homology CDS 2589988 2590107 . + 0 ID=cds2369;Parent=gene2406;Dbxref=Genbank:WP_002210871.1;Name=WP_002210871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210871.1;transl_table=11 NC_014029.1 RefSeq gene 2590427 2591071 . - . ID=gene2407;Name=YPZ3_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12065;old_locus_tag=YPZ3_2019 NC_014029.1 Protein Homology CDS 2590427 2591071 . - 0 ID=cds2370;Parent=gene2407;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NC_014029.1 RefSeq gene 2591081 2591470 . - . ID=gene2408;Name=YPZ3_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12070;old_locus_tag=YPZ3_2020 NC_014029.1 Protein Homology CDS 2591081 2591470 . - 0 ID=cds2371;Parent=gene2408;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11 NC_014029.1 RefSeq gene 2591571 2592620 . - . ID=gene2409;Name=YPZ3_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12075;old_locus_tag=YPZ3_2021 NC_014029.1 Protein Homology CDS 2591571 2592620 . - 0 ID=cds2372;Parent=gene2409;Dbxref=Genbank:WP_002210874.1;Name=WP_002210874.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_002210874.1;transl_table=11 NC_014029.1 RefSeq gene 2592620 2593492 . - . ID=gene2410;Name=YPZ3_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12080;old_locus_tag=YPZ3_2022 NC_014029.1 Protein Homology CDS 2592620 2593492 . - 0 ID=cds2373;Parent=gene2410;Dbxref=Genbank:WP_002214065.1;Name=WP_002214065.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_002214065.1;transl_table=11 NC_014029.1 RefSeq gene 2593665 2595275 . - . ID=gene2411;Name=YPZ3_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12085;old_locus_tag=YPZ3_2023 NC_014029.1 Protein Homology CDS 2593665 2595275 . - 0 ID=cds2374;Parent=gene2411;Dbxref=Genbank:WP_002220817.1;Name=WP_002220817.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002220817.1;transl_table=11 NC_014029.1 RefSeq gene 2595459 2597132 . - . ID=gene2412;Name=YPZ3_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12090;old_locus_tag=YPZ3_2024 NC_014029.1 Protein Homology CDS 2595459 2597132 . - 0 ID=cds2375;Parent=gene2412;Dbxref=Genbank:WP_002210876.1;Name=WP_002210876.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210876.1;transl_table=11 NC_014029.1 RefSeq gene 2597373 2598074 . - . ID=gene2413;Name=YPZ3_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12095;old_locus_tag=YPZ3_2025 NC_014029.1 Protein Homology CDS 2597373 2598074 . - 0 ID=cds2376;Parent=gene2413;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11 NC_014029.1 RefSeq gene 2598143 2601019 . - . ID=gene2414;Name=YPZ3_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12100;old_locus_tag=YPZ3_2026 NC_014029.1 Protein Homology CDS 2598143 2601019 . - 0 ID=cds2377;Parent=gene2414;Dbxref=Genbank:WP_002210878.1;Name=WP_002210878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210878.1;transl_table=11 NC_014029.1 RefSeq gene 2601547 2605353 . - . ID=gene2415;Name=YPZ3_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12105;old_locus_tag=YPZ3_2027 NC_014029.1 Protein Homology CDS 2601547 2605353 . - 0 ID=cds2378;Parent=gene2415;Dbxref=Genbank:WP_002224033.1;Name=WP_002224033.1;gbkey=CDS;product=autotransporter;protein_id=WP_002224033.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2601547 2603677 . + . ID=id183;gbkey=repeat_region NC_014029.1 RefSeq gene 2605828 2606493 . - . ID=gene2416;Name=YPZ3_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12110;old_locus_tag=YPZ3_2028 NC_014029.1 Protein Homology CDS 2605828 2606493 . - 0 ID=cds2379;Parent=gene2416;Dbxref=Genbank:WP_002210881.1;Name=WP_002210881.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210881.1;transl_table=11 NC_014029.1 RefSeq gene 2606683 2607669 . + . ID=gene2417;Name=YPZ3_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12115;old_locus_tag=YPZ3_2029 NC_014029.1 Protein Homology CDS 2606683 2607669 . + 0 ID=cds2380;Parent=gene2417;Dbxref=Genbank:WP_002210882.1;Name=WP_002210882.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210882.1;transl_table=11 NC_014029.1 RefSeq gene 2607666 2608043 . + . ID=gene2418;Name=YPZ3_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12120;old_locus_tag=YPZ3_2030 NC_014029.1 Protein Homology CDS 2607666 2608043 . + 0 ID=cds2381;Parent=gene2418;Dbxref=Genbank:WP_002210883.1;Name=WP_002210883.1;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_002210883.1;transl_table=11 NC_014029.1 RefSeq gene 2608056 2609291 . + . ID=gene2419;Name=YPZ3_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12125;old_locus_tag=YPZ3_2031 NC_014029.1 Protein Homology CDS 2608056 2609291 . + 0 ID=cds2382;Parent=gene2419;Dbxref=Genbank:WP_002210884.1;Name=WP_002210884.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210884.1;transl_table=11 NC_014029.1 RefSeq gene 2609583 2610080 . - . ID=gene2420;Name=YPZ3_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12130;old_locus_tag=YPZ3_2032 NC_014029.1 Protein Homology CDS 2609583 2610080 . - 0 ID=cds2383;Parent=gene2420;Dbxref=Genbank:WP_002210885.1;Name=WP_002210885.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_002210885.1;transl_table=11 NC_014029.1 RefSeq gene 2610243 2612408 . - . ID=gene2421;Name=YPZ3_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12135;old_locus_tag=YPZ3_2033 NC_014029.1 Protein Homology CDS 2610243 2612408 . - 0 ID=cds2384;Parent=gene2421;Dbxref=Genbank:WP_002210886.1;Name=WP_002210886.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_002210886.1;transl_table=11 NC_014029.1 RefSeq gene 2612761 2613708 . - . ID=gene2422;Name=YPZ3_RS12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS12140;partial=true;pseudo=true;start_range=.,2612761 NC_014029.1 Protein Homology CDS 2612761 2613708 . - 0 ID=cds2385;Parent=gene2422;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2612761;transl_table=11 NC_014029.1 RefSeq gene 2613705 2614592 . - . ID=gene2423;Name=YPZ3_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12145;old_locus_tag=YPZ3_2035 NC_014029.1 Protein Homology CDS 2613705 2614592 . - 0 ID=cds2386;Parent=gene2423;Dbxref=Genbank:WP_002210888.1;Name=WP_002210888.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_002210888.1;transl_table=11 NC_014029.1 RefSeq gene 2614797 2615378 . - . ID=gene2424;Name=YPZ3_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12150;old_locus_tag=YPZ3_2036 NC_014029.1 Protein Homology CDS 2614797 2615378 . - 0 ID=cds2387;Parent=gene2424;Dbxref=Genbank:WP_002210889.1;Name=WP_002210889.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210889.1;transl_table=11 NC_014029.1 RefSeq gene 2615382 2615733 . - . ID=gene2425;Name=YPZ3_RS12155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS12155;pseudo=true NC_014029.1 Protein Homology CDS 2615382 2615733 . - 0 ID=cds2388;Parent=gene2425;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2616921 2619620 . - . ID=gene2426;Name=YPZ3_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12160;old_locus_tag=YPZ3_2037 NC_014029.1 Protein Homology CDS 2616921 2619620 . - 0 ID=cds2389;Parent=gene2426;Dbxref=Genbank:WP_002210890.1;Name=WP_002210890.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_002210890.1;transl_table=11 NC_014029.1 RefSeq gene 2620021 2620719 . - . ID=gene2427;Name=YPZ3_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12165;old_locus_tag=YPZ3_2038 NC_014029.1 Protein Homology CDS 2620021 2620719 . - 0 ID=cds2390;Parent=gene2427;Dbxref=Genbank:WP_002210891.1;Name=WP_002210891.1;gbkey=CDS;product=magnesium transporter;protein_id=WP_002210891.1;transl_table=11 NC_014029.1 RefSeq gene 2621071 2621241 . - . ID=gene2428;Name=YPZ3_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12170 NC_014029.1 Protein Homology CDS 2621071 2621241 . - 0 ID=cds2391;Parent=gene2428;Dbxref=Genbank:WP_002214053.1;Name=WP_002214053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214053.1;transl_table=11 NC_014029.1 RefSeq gene 2621878 2623579 . + . ID=gene2429;Name=YPZ3_RS12175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS12175;pseudo=true NC_014029.1 Protein Homology CDS 2621878 2623579 . + 0 ID=cds2392;Parent=gene2429;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chemotaxis protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2623762 2623953 . - . ID=gene2430;Name=YPZ3_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12180 NC_014029.1 Protein Homology CDS 2623762 2623953 . - 0 ID=cds2393;Parent=gene2430;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NC_014029.1 cmsearch region 2624119 2624561 . - . ID=id184;Note=cspA;gbkey=misc_feature NC_014029.1 RefSeq gene 2624168 2624380 . - . ID=gene2431;Name=YPZ3_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12185 NC_014029.1 Protein Homology CDS 2624168 2624380 . - 0 ID=cds2394;Parent=gene2431;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11 NC_014029.1 RefSeq gene 2624921 2628103 . + . ID=gene2432;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YPZ3_RS12190;old_locus_tag=YPZ3_2041 NC_014029.1 Protein Homology CDS 2624921 2628103 . + 0 ID=cds2395;Parent=gene2432;Dbxref=Genbank:WP_002214048.1;Name=WP_002214048.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_002214048.1;transl_table=11 NC_014029.1 RefSeq gene 2628511 2629521 . + . ID=gene2433;Name=YPZ3_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12195;old_locus_tag=YPZ3_2042 NC_014029.1 Protein Homology CDS 2628511 2629521 . + 0 ID=cds2396;Parent=gene2433;Dbxref=Genbank:WP_002210897.1;Name=WP_002210897.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_002210897.1;transl_table=11 NC_014029.1 RefSeq gene 2629804 2630337 . + . ID=gene2434;Name=YPZ3_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12200;old_locus_tag=YPZ3_2043 NC_014029.1 Protein Homology CDS 2629804 2630337 . + 0 ID=cds2397;Parent=gene2434;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11 NC_014029.1 RefSeq gene 2630843 2631292 . + . ID=gene2435;Name=YPZ3_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12205;old_locus_tag=YPZ3_2044 NC_014029.1 Protein Homology CDS 2630843 2631292 . + 0 ID=cds2398;Parent=gene2435;Dbxref=Genbank:WP_002210900.1;Name=WP_002210900.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NC_014029.1 RefSeq gene 2631384 2632283 . + . ID=gene2436;Name=YPZ3_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12210;old_locus_tag=YPZ3_2045 NC_014029.1 Protein Homology CDS 2631384 2632283 . + 0 ID=cds2399;Parent=gene2436;Dbxref=Genbank:WP_002210901.1;Name=WP_002210901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210901.1;transl_table=11 NC_014029.1 RefSeq gene 2632586 2632789 . + . ID=gene2437;Name=YPZ3_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12215 NC_014029.1 Protein Homology CDS 2632586 2632789 . + 0 ID=cds2400;Parent=gene2437;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11 NC_014029.1 RefSeq gene 2633091 2634416 . - . ID=gene2438;Name=YPZ3_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12220;old_locus_tag=YPZ3_2046 NC_014029.1 Protein Homology CDS 2633091 2634416 . - 0 ID=cds2401;Parent=gene2438;Dbxref=Genbank:WP_002210903.1;Name=WP_002210903.1;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=WP_002210903.1;transl_table=11 NC_014029.1 RefSeq gene 2634717 2634890 . - . ID=gene2439;Name=YPZ3_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12225 NC_014029.1 Protein Homology CDS 2634717 2634890 . - 0 ID=cds2402;Parent=gene2439;Dbxref=Genbank:WP_002210904.1;Name=WP_002210904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210904.1;transl_table=11 NC_014029.1 RefSeq gene 2634948 2635331 . - . ID=gene2440;Name=YPZ3_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12230;old_locus_tag=YPZ3_2047 NC_014029.1 Protein Homology CDS 2634948 2635331 . - 0 ID=cds2403;Parent=gene2440;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NC_014029.1 RefSeq gene 2635491 2636348 . + . ID=gene2441;Name=YPZ3_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12235;old_locus_tag=YPZ3_2048 NC_014029.1 Protein Homology CDS 2635491 2636348 . + 0 ID=cds2404;Parent=gene2441;Dbxref=Genbank:WP_002210906.1;Name=WP_002210906.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210906.1;transl_table=11 NC_014029.1 RefSeq gene 2637268 2638848 . + . ID=gene2442;Name=YPZ3_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12240;old_locus_tag=YPZ3_2049 NC_014029.1 Protein Homology CDS 2637268 2638848 . + 0 ID=cds2405;Parent=gene2442;Dbxref=Genbank:WP_002210907.1;Name=WP_002210907.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210907.1;transl_table=11 NC_014029.1 RefSeq gene 2638968 2639228 . + . ID=gene2443;Name=YPZ3_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12245 NC_014029.1 Protein Homology CDS 2638968 2639228 . + 0 ID=cds2406;Parent=gene2443;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NC_014029.1 RefSeq gene 2639504 2640547 . + . ID=gene2444;Name=YPZ3_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12250;old_locus_tag=YPZ3_2050 NC_014029.1 Protein Homology CDS 2639504 2640547 . + 0 ID=cds2407;Parent=gene2444;Dbxref=Genbank:WP_002210909.1;Name=WP_002210909.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_002210909.1;transl_table=11 NC_014029.1 RefSeq gene 2640693 2641946 . - . ID=gene2445;Name=YPZ3_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12255;old_locus_tag=YPZ3_2051 NC_014029.1 Protein Homology CDS 2640693 2641946 . - 0 ID=cds2408;Parent=gene2445;Dbxref=Genbank:WP_002210910.1;Name=WP_002210910.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NC_014029.1 RefSeq gene 2642077 2642703 . + . ID=gene2446;Name=YPZ3_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12260;old_locus_tag=YPZ3_2052 NC_014029.1 Protein Homology CDS 2642077 2642703 . + 0 ID=cds2409;Parent=gene2446;Dbxref=Genbank:WP_002218214.1;Name=WP_002218214.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_002218214.1;transl_table=11 NC_014029.1 RefSeq gene 2642696 2643142 . + . ID=gene2447;Name=YPZ3_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12265;old_locus_tag=YPZ3_2053 NC_014029.1 Protein Homology CDS 2642696 2643142 . + 0 ID=cds2410;Parent=gene2447;Dbxref=Genbank:WP_002210912.1;Name=WP_002210912.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210912.1;transl_table=11 NC_014029.1 RefSeq gene 2643329 2644444 . + . ID=gene2448;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=YPZ3_RS12270;old_locus_tag=YPZ3_2054 NC_014029.1 Protein Homology CDS 2643329 2644444 . + 0 ID=cds2411;Parent=gene2448;Dbxref=Genbank:WP_002210913.1;Name=WP_002210913.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_002210913.1;transl_table=11 NC_014029.1 RefSeq gene 2644502 2645128 . + . ID=gene2449;Name=YPZ3_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12275;old_locus_tag=YPZ3_2055 NC_014029.1 Protein Homology CDS 2644502 2645128 . + 0 ID=cds2412;Parent=gene2449;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11 NC_014029.1 RefSeq gene 2645189 2646559 . + . ID=gene2450;Name=YPZ3_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12280;old_locus_tag=YPZ3_2056 NC_014029.1 Protein Homology CDS 2645189 2646559 . + 0 ID=cds2413;Parent=gene2450;Dbxref=Genbank:WP_002210915.1;Name=WP_002210915.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002210915.1;transl_table=11 NC_014029.1 RefSeq gene 2646747 2647370 . + . ID=gene2451;Name=YPZ3_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12285;old_locus_tag=YPZ3_2057 NC_014029.1 Protein Homology CDS 2646747 2647370 . + 0 ID=cds2414;Parent=gene2451;Dbxref=Genbank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210916.1;transl_table=11 NC_014029.1 RefSeq gene 2647581 2648252 . + . ID=gene2452;Name=YPZ3_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12290;old_locus_tag=YPZ3_2058 NC_014029.1 Protein Homology CDS 2647581 2648252 . + 0 ID=cds2415;Parent=gene2452;Dbxref=Genbank:WP_002210917.1;Name=WP_002210917.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210917.1;transl_table=11 NC_014029.1 RefSeq gene 2648258 2649712 . + . ID=gene2453;Name=YPZ3_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12295;old_locus_tag=YPZ3_2059 NC_014029.1 Protein Homology CDS 2648258 2649712 . + 0 ID=cds2416;Parent=gene2453;Dbxref=Genbank:WP_002210918.1;Name=WP_002210918.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_002210918.1;transl_table=11 NC_014029.1 RefSeq gene 2649796 2650917 . + . ID=gene2454;Name=YPZ3_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12300;old_locus_tag=YPZ3_2060 NC_014029.1 Protein Homology CDS 2649796 2650917 . + 0 ID=cds2417;Parent=gene2454;Dbxref=Genbank:WP_002210919.1;Name=WP_002210919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210919.1;transl_table=11 NC_014029.1 RefSeq gene 2651150 2652385 . - . ID=gene2455;Name=YPZ3_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12305;old_locus_tag=YPZ3_2061 NC_014029.1 Protein Homology CDS 2651150 2652385 . - 0 ID=cds2418;Parent=gene2455;Dbxref=Genbank:WP_002210920.1;Name=WP_002210920.1;gbkey=CDS;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NC_014029.1 RefSeq gene 2652715 2653551 . - . ID=gene2456;Name=YPZ3_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12310;old_locus_tag=YPZ3_2062 NC_014029.1 Protein Homology CDS 2652715 2653551 . - 0 ID=cds2419;Parent=gene2456;Dbxref=Genbank:WP_002210921.1;Name=WP_002210921.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11 NC_014029.1 RefSeq gene 2653745 2654515 . - . ID=gene2457;Name=YPZ3_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12315;old_locus_tag=YPZ3_2063 NC_014029.1 Protein Homology CDS 2653745 2654515 . - 0 ID=cds2420;Parent=gene2457;Dbxref=Genbank:WP_002216175.1;Name=WP_002216175.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_002216175.1;transl_table=11 NC_014029.1 RefSeq gene 2654534 2655781 . - . ID=gene2458;Name=YPZ3_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12320;old_locus_tag=YPZ3_2064 NC_014029.1 Protein Homology CDS 2654534 2655781 . - 0 ID=cds2421;Parent=gene2458;Dbxref=Genbank:WP_002210922.1;Name=WP_002210922.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002210922.1;transl_table=11 NC_014029.1 RefSeq gene 2655781 2656485 . - . ID=gene2459;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YPZ3_RS12325;old_locus_tag=YPZ3_2065 NC_014029.1 Protein Homology CDS 2655781 2656485 . - 0 ID=cds2422;Parent=gene2459;Dbxref=Genbank:WP_002210923.1;Name=WP_002210923.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NC_014029.1 RefSeq gene 2656478 2657680 . - . ID=gene2460;Name=YPZ3_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12330;old_locus_tag=YPZ3_2066 NC_014029.1 Protein Homology CDS 2656478 2657680 . - 0 ID=cds2423;Parent=gene2460;Dbxref=Genbank:WP_002222341.1;Name=WP_002222341.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002222341.1;transl_table=11 NC_014029.1 RefSeq gene 2657950 2661396 . + . ID=gene2461;Name=YPZ3_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12335;old_locus_tag=YPZ3_2067 NC_014029.1 Protein Homology CDS 2657950 2661396 . + 0 ID=cds2424;Parent=gene2461;Dbxref=Genbank:WP_002210924.1;Name=WP_002210924.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_002210924.1;transl_table=11 NC_014029.1 RefSeq gene 2661635 2662174 . - . ID=gene2462;Name=YPZ3_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12340;old_locus_tag=YPZ3_2068 NC_014029.1 Protein Homology CDS 2661635 2662174 . - 0 ID=cds2425;Parent=gene2462;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2662468 2663785 . + . ID=id185;gbkey=repeat_region NC_014029.1 RefSeq gene 2662504 2663712 . - . ID=gene2463;Name=YPZ3_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12345;old_locus_tag=YPZ3_2069 NC_014029.1 Protein Homology CDS 2662504 2663712 . - 0 ID=cds2426;Parent=gene2463;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2663808 2664221 . - . ID=gene2464;Name=YPZ3_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12350;old_locus_tag=YPZ3_2070 NC_014029.1 Protein Homology CDS 2663808 2664221 . - 0 ID=cds2427;Parent=gene2464;Dbxref=Genbank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NC_014029.1 RefSeq gene 2664229 2664594 . - . ID=gene2465;Name=YPZ3_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12355;old_locus_tag=YPZ3_2071 NC_014029.1 Protein Homology CDS 2664229 2664594 . - 0 ID=cds2428;Parent=gene2465;Dbxref=Genbank:WP_002213099.1;Name=WP_002213099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213099.1;transl_table=11 NC_014029.1 RefSeq gene 2665336 2666640 . - . ID=gene2466;Name=YPZ3_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12360;old_locus_tag=YPZ3_2072 NC_014029.1 Protein Homology CDS 2665336 2666640 . - 0 ID=cds2429;Parent=gene2466;Dbxref=Genbank:WP_002213097.1;Name=WP_002213097.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_002213097.1;transl_table=11 NC_014029.1 RefSeq gene 2667015 2667557 . - . ID=gene2467;Name=YPZ3_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12365;old_locus_tag=YPZ3_2073 NC_014029.1 Protein Homology CDS 2667015 2667557 . - 0 ID=cds2430;Parent=gene2467;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11 NC_014029.1 RefSeq gene 2667685 2668704 . - . ID=gene2468;Name=YPZ3_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12370;old_locus_tag=YPZ3_2074 NC_014029.1 Protein Homology CDS 2667685 2668704 . - 0 ID=cds2431;Parent=gene2468;Dbxref=Genbank:WP_002215854.1;Name=WP_002215854.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_002215854.1;transl_table=11 NC_014029.1 RefSeq gene 2668787 2669653 . - . ID=gene2469;Name=YPZ3_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12375;old_locus_tag=YPZ3_2075 NC_014029.1 Protein Homology CDS 2668787 2669653 . - 0 ID=cds2432;Parent=gene2469;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NC_014029.1 RefSeq gene 2669634 2670209 . - . ID=gene2470;Name=YPZ3_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12380;old_locus_tag=YPZ3_2076 NC_014029.1 Protein Homology CDS 2669634 2670209 . - 0 ID=cds2433;Parent=gene2470;Dbxref=Genbank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11 NC_014029.1 RefSeq gene 2670250 2670639 . - . ID=gene2471;Name=YPZ3_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12385;old_locus_tag=YPZ3_2077 NC_014029.1 Protein Homology CDS 2670250 2670639 . - 0 ID=cds2434;Parent=gene2471;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11 NC_014029.1 RefSeq gene 2670674 2671027 . - . ID=gene2472;Name=YPZ3_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12390;old_locus_tag=YPZ3_2078 NC_014029.1 Protein Homology CDS 2670674 2671027 . - 0 ID=cds2435;Parent=gene2472;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NC_014029.1 RefSeq gene 2671201 2672019 . - . ID=gene2473;Name=YPZ3_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12395;old_locus_tag=YPZ3_2079 NC_014029.1 Protein Homology CDS 2671201 2672019 . - 0 ID=cds2436;Parent=gene2473;Dbxref=Genbank:WP_002215853.1;Name=WP_002215853.1;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2672348 2673072 . + . ID=id186;gbkey=repeat_region NC_014029.1 RefSeq gene 2672462 2672920 . - . ID=gene2474;Name=YPZ3_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12400;old_locus_tag=YPZ3_2080 NC_014029.1 Protein Homology CDS 2672462 2672920 . - 0 ID=cds2437;Parent=gene2474;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 2673110 2674543 . - . ID=gene2475;Name=YPZ3_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12405;old_locus_tag=YPZ3_2081 NC_014029.1 Protein Homology CDS 2673110 2674543 . - 0 ID=cds2438;Parent=gene2475;Dbxref=Genbank:WP_002213085.1;Name=WP_002213085.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIBC;protein_id=WP_002213085.1;transl_table=11 NC_014029.1 RefSeq gene 2674849 2675658 . - . ID=gene2476;Name=YPZ3_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12410;old_locus_tag=YPZ3_2082 NC_014029.1 Protein Homology CDS 2674849 2675658 . - 0 ID=cds2439;Parent=gene2476;Dbxref=Genbank:WP_002213084.1;Name=WP_002213084.1;gbkey=CDS;product=DNAse;protein_id=WP_002213084.1;transl_table=11 NC_014029.1 RefSeq gene 2675673 2676695 . - . ID=gene2477;Name=YPZ3_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12415;old_locus_tag=YPZ3_2083 NC_014029.1 Protein Homology CDS 2675673 2676695 . - 0 ID=cds2440;Parent=gene2477;Dbxref=Genbank:WP_002213083.1;Name=WP_002213083.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11 NC_014029.1 RefSeq gene 2676695 2677333 . - . ID=gene2478;Name=YPZ3_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12420;old_locus_tag=YPZ3_2084 NC_014029.1 Protein Homology CDS 2676695 2677333 . - 0 ID=cds2441;Parent=gene2478;Dbxref=Genbank:WP_002213082.1;Name=WP_002213082.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_002213082.1;transl_table=11 NC_014029.1 RefSeq gene 2677323 2678348 . - . ID=gene2479;Name=YPZ3_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12425;old_locus_tag=YPZ3_2085 NC_014029.1 Protein Homology CDS 2677323 2678348 . - 0 ID=cds2442;Parent=gene2479;Dbxref=Genbank:WP_002217396.1;Name=WP_002217396.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_002217396.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2678431 2678604 . + . ID=id187;gbkey=repeat_region NC_014029.1 RefSeq gene 2678637 2679443 . - . ID=gene2480;Name=YPZ3_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12430;old_locus_tag=YPZ3_2086 NC_014029.1 Protein Homology CDS 2678637 2679443 . - 0 ID=cds2443;Parent=gene2480;Dbxref=Genbank:WP_002213080.1;Name=WP_002213080.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_002213080.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2679747 2680467 . + . ID=id188;gbkey=repeat_region NC_014029.1 RefSeq gene 2679859 2680317 . - . ID=gene2481;Name=YPZ3_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12435;old_locus_tag=YPZ3_2087 NC_014029.1 Protein Homology CDS 2679859 2680317 . - 0 ID=cds2444;Parent=gene2481;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 2680517 2681722 . - . ID=gene2482;Name=YPZ3_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12440;old_locus_tag=YPZ3_2088 NC_014029.1 Protein Homology CDS 2680517 2681722 . - 0 ID=cds2445;Parent=gene2482;Dbxref=Genbank:WP_002354075.1;Name=WP_002354075.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002354075.1;transl_table=11 NC_014029.1 RefSeq gene 2681853 2682089 . - . ID=gene2483;Name=YPZ3_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12445 NC_014029.1 Protein Homology CDS 2681853 2682089 . - 0 ID=cds2446;Parent=gene2483;Dbxref=Genbank:WP_002220787.1;Name=WP_002220787.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NC_014029.1 RefSeq gene 2682243 2682977 . - . ID=gene2484;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YPZ3_RS12450;old_locus_tag=YPZ3_2089 NC_014029.1 Protein Homology CDS 2682243 2682977 . - 0 ID=cds2447;Parent=gene2484;Dbxref=Genbank:WP_002210935.1;Name=WP_002210935.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_002210935.1;transl_table=11 NC_014029.1 RefSeq gene 2682991 2683920 . - . ID=gene2485;Name=YPZ3_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12455;old_locus_tag=YPZ3_2090 NC_014029.1 Protein Homology CDS 2682991 2683920 . - 0 ID=cds2448;Parent=gene2485;Dbxref=Genbank:WP_002210934.1;Name=WP_002210934.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_002210934.1;transl_table=11 NC_014029.1 RefSeq gene 2683958 2684908 . - . ID=gene2486;Name=YPZ3_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12460;old_locus_tag=YPZ3_2091 NC_014029.1 Protein Homology CDS 2683958 2684908 . - 0 ID=cds2449;Parent=gene2486;Dbxref=Genbank:WP_002210933.1;Name=WP_002210933.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NC_014029.1 RefSeq gene 2684915 2685919 . - . ID=gene2487;Name=YPZ3_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12465;old_locus_tag=YPZ3_2092 NC_014029.1 Protein Homology CDS 2684915 2685919 . - 0 ID=cds2450;Parent=gene2487;Dbxref=Genbank:WP_032465670.1;Name=WP_032465670.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_032465670.1;transl_table=11 NC_014029.1 RefSeq gene 2685983 2686150 . - . ID=gene2488;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YPZ3_RS12470 NC_014029.1 Protein Homology CDS 2685983 2686150 . - 0 ID=cds2451;Parent=gene2488;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NC_014029.1 RefSeq gene 2686163 2686687 . - . ID=gene2489;Name=YPZ3_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12475;old_locus_tag=YPZ3_2093 NC_014029.1 Protein Homology CDS 2686163 2686687 . - 0 ID=cds2452;Parent=gene2489;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11 NC_014029.1 RefSeq gene 2686829 2687425 . + . ID=gene2490;Name=YPZ3_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12480;old_locus_tag=YPZ3_2094 NC_014029.1 Protein Homology CDS 2686829 2687425 . + 0 ID=cds2453;Parent=gene2490;Dbxref=Genbank:WP_002210928.1;Name=WP_002210928.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210928.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2687470 2688192 . + . ID=id189;gbkey=repeat_region NC_014029.1 RefSeq gene 2687580 2688038 . - . ID=gene2491;Name=YPZ3_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12485;old_locus_tag=YPZ3_2095 NC_014029.1 Protein Homology CDS 2687580 2688038 . - 0 ID=cds2454;Parent=gene2491;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 2688028 2688183 . - . ID=gene2492;Name=YPZ3_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12490 NC_014029.1 Protein Homology CDS 2688028 2688183 . - 0 ID=cds2455;Parent=gene2492;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 2688258 2689220 . - . ID=gene2493;Name=YPZ3_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12495;old_locus_tag=YPZ3_2096 NC_014029.1 Protein Homology CDS 2688258 2689220 . - 0 ID=cds2456;Parent=gene2493;Dbxref=Genbank:WP_002210927.1;Name=WP_002210927.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=WP_002210927.1;transl_table=11 NC_014029.1 RefSeq gene 2689804 2693460 . + . ID=gene2494;Name=YPZ3_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12500;old_locus_tag=YPZ3_2097 NC_014029.1 Protein Homology CDS 2689804 2693460 . + 0 ID=cds2457;Parent=gene2494;Dbxref=Genbank:WP_002354074.1;Name=WP_002354074.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_002354074.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2693478 2694806 . + . ID=id190;gbkey=repeat_region NC_014029.1 RefSeq gene 2693556 2694764 . + . ID=gene2495;Name=YPZ3_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12505;old_locus_tag=YPZ3_2098 NC_014029.1 Protein Homology CDS 2693556 2694764 . + 0 ID=cds2458;Parent=gene2495;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2695041 2695328 . - . ID=gene2496;Name=YPZ3_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12510 NC_014029.1 Protein Homology CDS 2695041 2695328 . - 0 ID=cds2459;Parent=gene2496;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11 NC_014029.1 RefSeq gene 2695563 2696609 . + . ID=gene2497;Name=YPZ3_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12515;old_locus_tag=YPZ3_2099 NC_014029.1 Protein Homology CDS 2695563 2696609 . + 0 ID=cds2460;Parent=gene2497;Dbxref=Genbank:WP_002213109.1;Name=WP_002213109.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_002213109.1;transl_table=11 NC_014029.1 RefSeq gene 2696922 2697167 . + . ID=gene2498;Name=YPZ3_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12520 NC_014029.1 Protein Homology CDS 2696922 2697167 . + 0 ID=cds2461;Parent=gene2498;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NC_014029.1 RefSeq gene 2697366 2697494 . - . ID=gene2499;Name=YPZ3_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12525 NC_014029.1 Protein Homology CDS 2697366 2697494 . - 0 ID=cds2462;Parent=gene2499;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11 NC_014029.1 RefSeq gene 2697673 2697969 . + . ID=gene2500;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=YPZ3_RS12530 NC_014029.1 Protein Homology CDS 2697673 2697969 . + 0 ID=cds2463;Parent=gene2500;Dbxref=Genbank:WP_002217041.1;Name=WP_002217041.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_002217041.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2697896 2699213 . + . ID=id191;gbkey=repeat_region;gene=bssS NC_014029.1 RefSeq gene 2697932 2699140 . - . ID=gene2501;Name=YPZ3_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12535;old_locus_tag=YPZ3_2100 NC_014029.1 Protein Homology CDS 2697932 2699140 . - 0 ID=cds2464;Parent=gene2501;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2699501 2700616 . + . ID=gene2502;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YPZ3_RS12540;old_locus_tag=YPZ3_2101 NC_014029.1 Protein Homology CDS 2699501 2700616 . + 0 ID=cds2465;Parent=gene2502;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NC_014029.1 RefSeq gene 2700883 2701497 . + . ID=gene2503;Name=YPZ3_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12545;old_locus_tag=YPZ3_2102 NC_014029.1 Protein Homology CDS 2700883 2701497 . + 0 ID=cds2466;Parent=gene2503;Dbxref=Genbank:WP_002211851.1;Name=WP_002211851.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211851.1;transl_table=11 NC_014029.1 RefSeq gene 2702069 2703127 . - . ID=gene2504;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=YPZ3_RS12550;old_locus_tag=YPZ3_2103 NC_014029.1 Protein Homology CDS 2702069 2703127 . - 0 ID=cds2467;Parent=gene2504;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11 NC_014029.1 RefSeq gene 2703276 2704343 . - . ID=gene2505;Name=YPZ3_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12555;old_locus_tag=YPZ3_2104 NC_014029.1 Protein Homology CDS 2703276 2704343 . - 0 ID=cds2468;Parent=gene2505;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11 NC_014029.1 RefSeq gene 2704387 2704515 . - . ID=gene2506;Name=YPZ3_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12560 NC_014029.1 Protein Homology CDS 2704387 2704515 . - 0 ID=cds2469;Parent=gene2506;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11 NC_014029.1 RefSeq gene 2704702 2704866 . - . ID=gene2507;Name=YPZ3_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12565 NC_014029.1 Protein Homology CDS 2704702 2704866 . - 0 ID=cds2470;Parent=gene2507;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11 NC_014029.1 RefSeq gene 2705196 2705357 . - . ID=gene2508;Name=YPZ3_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12570 NC_014029.1 Protein Homology CDS 2705196 2705357 . - 0 ID=cds2471;Parent=gene2508;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11 NC_014029.1 RefSeq gene 2705394 2706071 . - . ID=gene2509;Name=YPZ3_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12575;old_locus_tag=YPZ3_2105 NC_014029.1 Protein Homology CDS 2705394 2706071 . - 0 ID=cds2472;Parent=gene2509;Dbxref=Genbank:WP_002211857.1;Name=WP_002211857.1;gbkey=CDS;product=transporter;protein_id=WP_002211857.1;transl_table=11 NC_014029.1 RefSeq gene 2706502 2707146 . + . ID=gene2510;Name=YPZ3_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12580;old_locus_tag=YPZ3_2106 NC_014029.1 Protein Homology CDS 2706502 2707146 . + 0 ID=cds2473;Parent=gene2510;Dbxref=Genbank:WP_002211858.1;Name=WP_002211858.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11 NC_014029.1 RefSeq gene 2707139 2707876 . - . ID=gene2511;Name=YPZ3_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12585;old_locus_tag=YPZ3_2107 NC_014029.1 Protein Homology CDS 2707139 2707876 . - 0 ID=cds2474;Parent=gene2511;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NC_014029.1 RefSeq gene 2708363 2709289 . - . ID=gene2512;Name=YPZ3_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12590;old_locus_tag=YPZ3_2108 NC_014029.1 Protein Homology CDS 2708363 2709289 . - 0 ID=cds2475;Parent=gene2512;Dbxref=Genbank:WP_002211861.1;Name=WP_002211861.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211861.1;transl_table=11 NC_014029.1 RefSeq gene 2709404 2709613 . - . ID=gene2513;Name=YPZ3_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12595 NC_014029.1 Protein Homology CDS 2709404 2709613 . - 0 ID=cds2476;Parent=gene2513;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11 NC_014029.1 RefSeq gene 2709737 2711095 . + . ID=gene2514;Name=YPZ3_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12600;old_locus_tag=YPZ3_2109 NC_014029.1 Protein Homology CDS 2709737 2711095 . + 0 ID=cds2477;Parent=gene2514;Dbxref=Genbank:WP_002211863.1;Name=WP_002211863.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211863.1;transl_table=11 NC_014029.1 RefSeq gene 2711142 2711645 . + . ID=gene2515;Name=YPZ3_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12605;old_locus_tag=YPZ3_2110 NC_014029.1 Protein Homology CDS 2711142 2711645 . + 0 ID=cds2478;Parent=gene2515;Dbxref=Genbank:WP_002211864.1;Name=WP_002211864.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_002211864.1;transl_table=11 NC_014029.1 RefSeq gene 2711656 2712675 . + . ID=gene2516;Name=YPZ3_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12610;old_locus_tag=YPZ3_2111 NC_014029.1 Protein Homology CDS 2711656 2712675 . + 0 ID=cds2479;Parent=gene2516;Dbxref=Genbank:WP_002211865.1;Name=WP_002211865.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211865.1;transl_table=11 NC_014029.1 RefSeq gene 2712753 2713307 . - . ID=gene2517;Name=YPZ3_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12615;old_locus_tag=YPZ3_2112 NC_014029.1 Protein Homology CDS 2712753 2713307 . - 0 ID=cds2480;Parent=gene2517;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11 NC_014029.1 RefSeq gene 2713318 2714322 . - . ID=gene2518;Name=YPZ3_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12620;old_locus_tag=YPZ3_2113 NC_014029.1 Protein Homology CDS 2713318 2714322 . - 0 ID=cds2481;Parent=gene2518;Dbxref=Genbank:WP_002211867.1;Name=WP_002211867.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_002211867.1;transl_table=11 NC_014029.1 RefSeq gene 2714340 2715290 . - . ID=gene2519;Name=YPZ3_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12625;old_locus_tag=YPZ3_2114 NC_014029.1 Protein Homology CDS 2714340 2715290 . - 0 ID=cds2482;Parent=gene2519;Dbxref=Genbank:WP_002211868.1;Name=WP_002211868.1;gbkey=CDS;product=CRISPR type I-F system protein Csy2;protein_id=WP_002211868.1;transl_table=11 NC_014029.1 RefSeq gene 2715287 2716633 . - . ID=gene2520;Name=YPZ3_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12630;old_locus_tag=YPZ3_2115 NC_014029.1 Protein Homology CDS 2715287 2716633 . - 0 ID=cds2483;Parent=gene2520;Dbxref=Genbank:WP_002222491.1;Name=WP_002222491.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_002222491.1;transl_table=11 NC_014029.1 RefSeq gene 2717041 2720328 . - . ID=gene2521;Name=YPZ3_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12635;old_locus_tag=YPZ3_2116 NC_014029.1 Protein Homology CDS 2717041 2720328 . - 0 ID=cds2484;Parent=gene2521;Dbxref=Genbank:WP_002221142.1;Name=WP_002221142.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_002221142.1;transl_table=11 NC_014029.1 RefSeq gene 2720325 2721305 . - . ID=gene2522;Name=YPZ3_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12640;old_locus_tag=YPZ3_2117 NC_014029.1 Protein Homology CDS 2720325 2721305 . - 0 ID=cds2485;Parent=gene2522;Dbxref=Genbank:WP_002210191.1;Name=WP_002210191.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_002210191.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2721665 2722112 . + . ID=id192;gbkey=repeat_region NC_014029.1 RefSeq gene 2722450 2723694 . + . ID=gene2523;Name=YPZ3_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12645;old_locus_tag=YPZ3_2118 NC_014029.1 Protein Homology CDS 2722450 2723694 . + 0 ID=cds2486;Parent=gene2523;Dbxref=Genbank:WP_002210192.1;Name=WP_002210192.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_002210192.1;transl_table=11 NC_014029.1 RefSeq gene 2724289 2725563 . - . ID=gene2524;Name=YPZ3_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12650;old_locus_tag=YPZ3_2119 NC_014029.1 Protein Homology CDS 2724289 2725563 . - 0 ID=cds2487;Parent=gene2524;Dbxref=Genbank:WP_002210193.1;Name=WP_002210193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210193.1;transl_table=11 NC_014029.1 RefSeq gene 2725602 2726717 . - . ID=gene2525;Name=YPZ3_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12655;old_locus_tag=YPZ3_2120 NC_014029.1 Protein Homology CDS 2725602 2726717 . - 0 ID=cds2488;Parent=gene2525;Dbxref=Genbank:WP_002210194.1;Name=WP_002210194.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210194.1;transl_table=11 NC_014029.1 RefSeq gene 2726840 2727778 . - . ID=gene2526;Name=YPZ3_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12660;old_locus_tag=YPZ3_2121 NC_014029.1 Protein Homology CDS 2726840 2727778 . - 0 ID=cds2489;Parent=gene2526;Dbxref=Genbank:WP_002213840.1;Name=WP_002213840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213840.1;transl_table=11 NC_014029.1 RefSeq gene 2727805 2728860 . - . ID=gene2527;Name=YPZ3_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12665;old_locus_tag=YPZ3_2122 NC_014029.1 Protein Homology CDS 2727805 2728860 . - 0 ID=cds2490;Parent=gene2527;Dbxref=Genbank:WP_002210196.1;Name=WP_002210196.1;gbkey=CDS;product=glycosidase;protein_id=WP_002210196.1;transl_table=11 NC_014029.1 RefSeq gene 2729007 2729831 . - . ID=gene2528;Name=YPZ3_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12670;old_locus_tag=YPZ3_2123 NC_014029.1 Protein Homology CDS 2729007 2729831 . - 0 ID=cds2491;Parent=gene2528;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NC_014029.1 RefSeq gene 2729832 2730707 . - . ID=gene2529;Name=YPZ3_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12675;old_locus_tag=YPZ3_2124 NC_014029.1 Protein Homology CDS 2729832 2730707 . - 0 ID=cds2492;Parent=gene2529;Dbxref=Genbank:WP_002210198.1;Name=WP_002210198.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210198.1;transl_table=11 NC_014029.1 RefSeq gene 2730816 2732102 . - . ID=gene2530;Name=YPZ3_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12680;old_locus_tag=YPZ3_2125 NC_014029.1 Protein Homology CDS 2730816 2732102 . - 0 ID=cds2493;Parent=gene2530;Dbxref=Genbank:WP_002210199.1;Name=WP_002210199.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002210199.1;transl_table=11 NC_014029.1 RefSeq gene 2732374 2733414 . + . ID=gene2531;Name=YPZ3_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12685;old_locus_tag=YPZ3_2126 NC_014029.1 Protein Homology CDS 2732374 2733414 . + 0 ID=cds2494;Parent=gene2531;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NC_014029.1 RefSeq gene 2733431 2734819 . + . ID=gene2532;Name=YPZ3_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12690;old_locus_tag=YPZ3_2127 NC_014029.1 Protein Homology CDS 2733431 2734819 . + 0 ID=cds2495;Parent=gene2532;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11 NC_014029.1 RefSeq gene 2734919 2735998 . + . ID=gene2533;Name=YPZ3_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12695;old_locus_tag=YPZ3_2128 NC_014029.1 Protein Homology CDS 2734919 2735998 . + 0 ID=cds2496;Parent=gene2533;Dbxref=Genbank:WP_002210202.1;Name=WP_002210202.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210202.1;transl_table=11 NC_014029.1 RefSeq gene 2736263 2736715 . - . ID=gene2534;Name=YPZ3_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12700;old_locus_tag=YPZ3_2129 NC_014029.1 Protein Homology CDS 2736263 2736715 . - 0 ID=cds2497;Parent=gene2534;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2736905 2737073 . + . ID=id193;gbkey=repeat_region NC_014029.1 RefSeq gene 2737066 2737458 . - . ID=gene2535;Name=YPZ3_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12705;old_locus_tag=YPZ3_2130 NC_014029.1 Protein Homology CDS 2737066 2737458 . - 0 ID=cds2498;Parent=gene2535;Dbxref=Genbank:WP_002213832.1;Name=WP_002213832.1;gbkey=CDS;product=adhesin;protein_id=WP_002213832.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2737227 2737477 . + . ID=id194;gbkey=repeat_region NC_014029.1 RefSeq gene 2737618 2738022 . - . ID=gene2536;Name=YPZ3_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12710 NC_014029.1 Protein Homology CDS 2737618 2738022 . - 0 ID=cds2499;Parent=gene2536;Dbxref=Genbank:WP_002213829.1;Name=WP_002213829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213829.1;transl_table=11 NC_014029.1 RefSeq gene 2738164 2738331 . - . ID=gene2537;Name=YPZ3_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12715 NC_014029.1 Protein Homology CDS 2738164 2738331 . - 0 ID=cds2500;Parent=gene2537;Dbxref=Genbank:WP_002213827.1;Name=WP_002213827.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213827.1;transl_table=11 NC_014029.1 RefSeq gene 2738534 2738731 . - . ID=gene2538;Name=YPZ3_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12720 NC_014029.1 Protein Homology CDS 2738534 2738731 . - 0 ID=cds2501;Parent=gene2538;Dbxref=Genbank:WP_002210208.1;Name=WP_002210208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210208.1;transl_table=11 NC_014029.1 RefSeq gene 2738741 2740774 . - . ID=gene2539;Name=YPZ3_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12725;old_locus_tag=YPZ3_2131 NC_014029.1 Protein Homology CDS 2738741 2740774 . - 0 ID=cds2502;Parent=gene2539;Dbxref=Genbank:WP_002213825.1;Name=WP_002213825.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002213825.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2739346 2740827 . + . ID=id195;gbkey=repeat_region NC_014029.1 RefSeq gene 2740950 2741297 . - . ID=gene2540;Name=YPZ3_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12730 NC_014029.1 Protein Homology CDS 2740950 2741297 . - 0 ID=cds2503;Parent=gene2540;Dbxref=Genbank:WP_016256369.1;Name=WP_016256369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256369.1;transl_table=11 NC_014029.1 RefSeq gene 2741438 2741689 . - . ID=gene2541;Name=YPZ3_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12735 NC_014029.1 Protein Homology CDS 2741438 2741689 . - 0 ID=cds2504;Parent=gene2541;Dbxref=Genbank:WP_002213821.1;Name=WP_002213821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213821.1;transl_table=11 NC_014029.1 RefSeq gene 2741934 2742443 . - . ID=gene2542;Name=YPZ3_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12740;old_locus_tag=YPZ3_2132 NC_014029.1 Protein Homology CDS 2741934 2742443 . - 0 ID=cds2505;Parent=gene2542;Dbxref=Genbank:WP_002210211.1;Name=WP_002210211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210211.1;transl_table=11 NC_014029.1 RefSeq gene 2742445 2750040 . - . ID=gene2543;Name=YPZ3_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12745;old_locus_tag=YPZ3_2133 NC_014029.1 Protein Homology CDS 2742445 2750040 . - 0 ID=cds2506;Parent=gene2543;Dbxref=Genbank:WP_002213819.1;Name=WP_002213819.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002213819.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2743054 2744384 . + . ID=id196;gbkey=repeat_region NC_014029.1 RefSeq gene 2750196 2751884 . - . ID=gene2544;Name=YPZ3_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12750;old_locus_tag=YPZ3_2134 NC_014029.1 Protein Homology CDS 2750196 2751884 . - 0 ID=cds2507;Parent=gene2544;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11 NC_014029.1 RefSeq gene 2752537 2753502 . - . ID=gene2545;Name=YPZ3_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12755;old_locus_tag=YPZ3_2135 NC_014029.1 Protein Homology CDS 2752537 2753502 . - 0 ID=cds2508;Parent=gene2545;Dbxref=Genbank:WP_002213817.1;Name=WP_002213817.1;gbkey=CDS;product=dioxygenase subunit beta;protein_id=WP_002213817.1;transl_table=11 NC_014029.1 RefSeq gene 2753598 2754722 . - . ID=gene2546;Name=YPZ3_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12760;old_locus_tag=YPZ3_2136 NC_014029.1 Protein Homology CDS 2753598 2754722 . - 0 ID=cds2509;Parent=gene2546;Dbxref=Genbank:WP_002213815.1;Name=WP_002213815.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002213815.1;transl_table=11 NC_014029.1 RefSeq gene 2754839 2756485 . - . ID=gene2547;Name=YPZ3_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12765;old_locus_tag=YPZ3_2137 NC_014029.1 Protein Homology CDS 2754839 2756485 . - 0 ID=cds2510;Parent=gene2547;Dbxref=Genbank:WP_002210215.1;Name=WP_002210215.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_002210215.1;transl_table=11 NC_014029.1 RefSeq gene 2756851 2757033 . - . ID=gene2548;Name=YPZ3_RS12770;gbkey=Gene;gene_biotype=other;locus_tag=YPZ3_RS12770 NC_014029.1 RefSeq repeat_region 2756892 2757067 . + . ID=id197;gbkey=repeat_region NC_014029.1 RefSeq gene 2757102 2758187 . - . ID=gene2549;Name=YPZ3_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12775;old_locus_tag=YPZ3_2138 NC_014029.1 Protein Homology CDS 2757102 2758187 . - 0 ID=cds2511;Parent=gene2549;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NC_014029.1 RefSeq gene 2758290 2759231 . + . ID=gene2550;Name=YPZ3_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12780;old_locus_tag=YPZ3_2139 NC_014029.1 Protein Homology CDS 2758290 2759231 . + 0 ID=cds2512;Parent=gene2550;Dbxref=Genbank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210219.1;transl_table=11 NC_014029.1 RefSeq gene 2759478 2760482 . + . ID=gene2551;Name=YPZ3_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12785;old_locus_tag=YPZ3_2140 NC_014029.1 Protein Homology CDS 2759478 2760482 . + 0 ID=cds2513;Parent=gene2551;Dbxref=Genbank:WP_002210220.1;Name=WP_002210220.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210220.1;transl_table=11 NC_014029.1 RefSeq gene 2760615 2761607 . - . ID=gene2552;Name=YPZ3_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12790;old_locus_tag=YPZ3_2141 NC_014029.1 Protein Homology CDS 2760615 2761607 . - 0 ID=cds2514;Parent=gene2552;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NC_014029.1 RefSeq gene 2761604 2763094 . - . ID=gene2553;Name=YPZ3_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12795;old_locus_tag=YPZ3_2142 NC_014029.1 Protein Homology CDS 2761604 2763094 . - 0 ID=cds2515;Parent=gene2553;Dbxref=Genbank:WP_002210222.1;Name=WP_002210222.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210222.1;transl_table=11 NC_014029.1 RefSeq gene 2763134 2764051 . - . ID=gene2554;Name=YPZ3_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12800;old_locus_tag=YPZ3_2143 NC_014029.1 Protein Homology CDS 2763134 2764051 . - 0 ID=cds2516;Parent=gene2554;Dbxref=Genbank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210223.1;transl_table=11 NC_014029.1 RefSeq gene 2764226 2765293 . - . ID=gene2555;Name=YPZ3_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12805;old_locus_tag=YPZ3_2144 NC_014029.1 Protein Homology CDS 2764226 2765293 . - 0 ID=cds2517;Parent=gene2555;Dbxref=Genbank:WP_002210224.1;Name=WP_002210224.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002210224.1;transl_table=11 NC_014029.1 RefSeq gene 2766035 2766703 . - . ID=gene2556;Name=YPZ3_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12810;old_locus_tag=YPZ3_2145 NC_014029.1 Protein Homology CDS 2766035 2766703 . - 0 ID=cds2518;Parent=gene2556;Dbxref=Genbank:WP_002210225.1;Name=WP_002210225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210225.1;transl_table=11 NC_014029.1 RefSeq gene 2766899 2767441 . - . ID=gene2557;Name=YPZ3_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12815;old_locus_tag=YPZ3_2146 NC_014029.1 Protein Homology CDS 2766899 2767441 . - 0 ID=cds2519;Parent=gene2557;Dbxref=Genbank:WP_002210227.1;Name=WP_002210227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210227.1;transl_table=11 NC_014029.1 RefSeq gene 2767679 2768617 . - . ID=gene2558;Name=YPZ3_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12820;old_locus_tag=YPZ3_2147 NC_014029.1 Protein Homology CDS 2767679 2768617 . - 0 ID=cds2520;Parent=gene2558;Dbxref=Genbank:WP_002210228.1;Name=WP_002210228.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_002210228.1;transl_table=11 NC_014029.1 RefSeq gene 2768933 2769457 . - . ID=gene2559;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YPZ3_RS12825;old_locus_tag=YPZ3_2148 NC_014029.1 Protein Homology CDS 2768933 2769457 . - 0 ID=cds2521;Parent=gene2559;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11 NC_014029.1 RefSeq gene 2769862 2770749 . + . ID=gene2560;Name=YPZ3_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12830;old_locus_tag=YPZ3_2149 NC_014029.1 Protein Homology CDS 2769862 2770749 . + 0 ID=cds2522;Parent=gene2560;Dbxref=Genbank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002213809.1;transl_table=11 NC_014029.1 RefSeq gene 2770765 2771262 . + . ID=gene2561;Name=YPZ3_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12835;old_locus_tag=YPZ3_2150 NC_014029.1 Protein Homology CDS 2770765 2771262 . + 0 ID=cds2523;Parent=gene2561;Dbxref=Genbank:WP_002210231.1;Name=WP_002210231.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002210231.1;transl_table=11 NC_014029.1 RefSeq gene 2771285 2772061 . + . ID=gene2562;Name=YPZ3_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12840;old_locus_tag=YPZ3_2151 NC_014029.1 Protein Homology CDS 2771285 2772061 . + 0 ID=cds2524;Parent=gene2562;Dbxref=Genbank:WP_002210232.1;Name=WP_002210232.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_002210232.1;transl_table=11 NC_014029.1 RefSeq gene 2772318 2772821 . + . ID=gene2563;Name=YPZ3_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12845;old_locus_tag=YPZ3_2152 NC_014029.1 Protein Homology CDS 2772318 2772821 . + 0 ID=cds2525;Parent=gene2563;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11 NC_014029.1 RefSeq gene 2773141 2774268 . + . ID=gene2564;Name=YPZ3_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12850;old_locus_tag=YPZ3_2153 NC_014029.1 Protein Homology CDS 2773141 2774268 . + 0 ID=cds2526;Parent=gene2564;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11 NC_014029.1 RefSeq gene 2774838 2775581 . + . ID=gene2565;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YPZ3_RS12855;old_locus_tag=YPZ3_2154 NC_014029.1 Protein Homology CDS 2774838 2775581 . + 0 ID=cds2527;Parent=gene2565;Dbxref=Genbank:WP_002210235.1;Name=WP_002210235.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-binding protein;protein_id=WP_002210235.1;transl_table=11 NC_014029.1 RefSeq gene 2775616 2776272 . + . ID=gene2566;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YPZ3_RS12860;old_locus_tag=YPZ3_2155 NC_014029.1 Protein Homology CDS 2775616 2776272 . + 0 ID=cds2528;Parent=gene2566;Dbxref=Genbank:WP_002210236.1;Name=WP_002210236.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_002210236.1;transl_table=11 NC_014029.1 RefSeq gene 2776269 2776991 . + . ID=gene2567;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS12865;old_locus_tag=YPZ3_2156 NC_014029.1 Protein Homology CDS 2776269 2776991 . + 0 ID=cds2529;Parent=gene2567;Dbxref=Genbank:WP_002210237.1;Name=WP_002210237.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_002210237.1;transl_table=11 NC_014029.1 RefSeq gene 2777231 2778529 . - . ID=gene2568;Name=YPZ3_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12870;old_locus_tag=YPZ3_2157 NC_014029.1 Protein Homology CDS 2777231 2778529 . - 0 ID=cds2530;Parent=gene2568;Dbxref=Genbank:WP_002210238.1;Name=WP_002210238.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210238.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2778500 2780457 . + . ID=id198;gbkey=repeat_region NC_014029.1 RefSeq gene 2778588 2779610 . + . ID=gene2569;Name=YPZ3_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12875;old_locus_tag=YPZ3_2158 NC_014029.1 Protein Homology CDS 2778588 2779610 . + 0 ID=cds2531;Parent=gene2569;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 2779610 2780389 . + . ID=gene2570;Name=YPZ3_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12880;old_locus_tag=YPZ3_2159 NC_014029.1 Protein Homology CDS 2779610 2780389 . + 0 ID=cds2532;Parent=gene2570;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 2780514 2781194 . + . ID=gene2571;Name=YPZ3_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12885;old_locus_tag=YPZ3_2160 NC_014029.1 Protein Homology CDS 2780514 2781194 . + 0 ID=cds2533;Parent=gene2571;Dbxref=Genbank:WP_002361295.1;Name=WP_002361295.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002361295.1;transl_table=11 NC_014029.1 RefSeq gene 2781289 2782620 . + . ID=gene2572;Name=YPZ3_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12890;old_locus_tag=YPZ3_2161 NC_014029.1 Protein Homology CDS 2781289 2782620 . + 0 ID=cds2534;Parent=gene2572;Dbxref=Genbank:WP_002209567.1;Name=WP_002209567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209567.1;transl_table=11 NC_014029.1 RefSeq gene 2782737 2782813 . + . ID=gene2573;Name=YPZ3_RS12895;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS12895;old_locus_tag=YPZ3_t30 NC_014029.1 tRNAscan-SE tRNA 2782737 2782813 . + . ID=rna35;Parent=gene2573;anticodon=(pos:2782771..2782773);gbkey=tRNA;product=tRNA-Pro NC_014029.1 tRNAscan-SE exon 2782737 2782813 . + . ID=id199;Parent=rna35;anticodon=(pos:2782771..2782773);gbkey=tRNA;product=tRNA-Pro NC_014029.1 RefSeq gene 2783126 2784517 . + . ID=gene2574;Name=YPZ3_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12900;old_locus_tag=YPZ3_2162 NC_014029.1 Protein Homology CDS 2783126 2784517 . + 0 ID=cds2535;Parent=gene2574;Dbxref=Genbank:WP_002224153.1;Name=WP_002224153.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002224153.1;transl_table=11 NC_014029.1 RefSeq gene 2784719 2786389 . + . ID=gene2575;Name=YPZ3_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12905;old_locus_tag=YPZ3_2163 NC_014029.1 Protein Homology CDS 2784719 2786389 . + 0 ID=cds2536;Parent=gene2575;Dbxref=Genbank:WP_002209565.1;Name=WP_002209565.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002209565.1;transl_table=11 NC_014029.1 RefSeq gene 2786449 2786655 . + . ID=gene2576;Name=YPZ3_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12910 NC_014029.1 Protein Homology CDS 2786449 2786655 . + 0 ID=cds2537;Parent=gene2576;Dbxref=Genbank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11 NC_014029.1 RefSeq gene 2787058 2788665 . + . ID=gene2577;Name=YPZ3_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12915;old_locus_tag=YPZ3_2164 NC_014029.1 Protein Homology CDS 2787058 2788665 . + 0 ID=cds2538;Parent=gene2577;Dbxref=Genbank:WP_002209564.1;Name=WP_002209564.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002209564.1;transl_table=11 NC_014029.1 RefSeq gene 2788948 2789895 . + . ID=gene2578;Name=YPZ3_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12920;old_locus_tag=YPZ3_2165 NC_014029.1 Protein Homology CDS 2788948 2789895 . + 0 ID=cds2539;Parent=gene2578;Dbxref=Genbank:WP_002217330.1;Name=WP_002217330.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002217330.1;transl_table=11 NC_014029.1 RefSeq gene 2789977 2790879 . + . ID=gene2579;Name=YPZ3_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12925;old_locus_tag=YPZ3_2166 NC_014029.1 Protein Homology CDS 2789977 2790879 . + 0 ID=cds2540;Parent=gene2579;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11 NC_014029.1 RefSeq gene 2790893 2791873 . + . ID=gene2580;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YPZ3_RS12930;old_locus_tag=YPZ3_2167 NC_014029.1 Protein Homology CDS 2790893 2791873 . + 0 ID=cds2541;Parent=gene2580;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NC_014029.1 RefSeq gene 2791939 2792946 . + . ID=gene2581;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YPZ3_RS12935;old_locus_tag=YPZ3_2168 NC_014029.1 Protein Homology CDS 2791939 2792946 . + 0 ID=cds2542;Parent=gene2581;Dbxref=Genbank:WP_002228160.1;Name=WP_002228160.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002228160.1;transl_table=11 NC_014029.1 RefSeq gene 2793265 2794164 . + . ID=gene2582;Name=YPZ3_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12940;old_locus_tag=YPZ3_2169 NC_014029.1 Protein Homology CDS 2793265 2794164 . + 0 ID=cds2543;Parent=gene2582;Dbxref=Genbank:WP_002214765.1;Name=WP_002214765.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endonuclease III;protein_id=WP_002214765.1;transl_table=11 NC_014029.1 RefSeq gene 2794511 2796493 . + . ID=gene2583;Name=YPZ3_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12945;old_locus_tag=YPZ3_2170 NC_014029.1 Protein Homology CDS 2794511 2796493 . + 0 ID=cds2544;Parent=gene2583;Dbxref=Genbank:WP_002214767.1;Name=WP_002214767.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_002214767.1;transl_table=11 NC_014029.1 RefSeq gene 2797133 2797837 . + . ID=gene2584;Name=YPZ3_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12950;old_locus_tag=YPZ3_2171 NC_014029.1 Protein Homology CDS 2797133 2797837 . + 0 ID=cds2545;Parent=gene2584;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11 NC_014029.1 RefSeq gene 2798083 2799801 . + . ID=gene2585;Name=YPZ3_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12955;old_locus_tag=YPZ3_2172 NC_014029.1 Protein Homology CDS 2798083 2799801 . + 0 ID=cds2546;Parent=gene2585;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NC_014029.1 RefSeq gene 2799926 2800405 . + . ID=gene2586;Name=YPZ3_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12960;old_locus_tag=YPZ3_2173 NC_014029.1 Protein Homology CDS 2799926 2800405 . + 0 ID=cds2547;Parent=gene2586;Dbxref=Genbank:WP_002209554.1;Name=WP_002209554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209554.1;transl_table=11 NC_014029.1 RefSeq gene 2800860 2802149 . + . ID=gene2587;Name=YPZ3_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12965;old_locus_tag=YPZ3_2174 NC_014029.1 Protein Homology CDS 2800860 2802149 . + 0 ID=cds2548;Parent=gene2587;Dbxref=Genbank:WP_002209553.1;Name=WP_002209553.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_002209553.1;transl_table=11 NC_014029.1 RefSeq gene 2802514 2804013 . + . ID=gene2588;Name=YPZ3_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12970;old_locus_tag=YPZ3_2175 NC_014029.1 Protein Homology CDS 2802514 2804013 . + 0 ID=cds2549;Parent=gene2588;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11 NC_014029.1 RefSeq gene 2804177 2805121 . - . ID=gene2589;Name=YPZ3_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12975;old_locus_tag=YPZ3_2176 NC_014029.1 Protein Homology CDS 2804177 2805121 . - 0 ID=cds2550;Parent=gene2589;Dbxref=Genbank:WP_002209549.1;Name=WP_002209549.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NC_014029.1 RefSeq gene 2805400 2805600 . - . ID=gene2590;Name=YPZ3_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12980 NC_014029.1 Protein Homology CDS 2805400 2805600 . - 0 ID=cds2551;Parent=gene2590;Dbxref=Genbank:WP_002209548.1;Name=WP_002209548.1;gbkey=CDS;product=tautomerase;protein_id=WP_002209548.1;transl_table=11 NC_014029.1 RefSeq gene 2805819 2806664 . + . ID=gene2591;Name=YPZ3_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12985;old_locus_tag=YPZ3_2177 NC_014029.1 Protein Homology CDS 2805819 2806664 . + 0 ID=cds2552;Parent=gene2591;Dbxref=Genbank:WP_002209547.1;Name=WP_002209547.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=WP_002209547.1;transl_table=11 NC_014029.1 RefSeq gene 2806969 2809191 . + . ID=gene2592;Name=YPZ3_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12990;old_locus_tag=YPZ3_2178 NC_014029.1 Protein Homology CDS 2806969 2809191 . + 0 ID=cds2553;Parent=gene2592;Dbxref=Genbank:WP_002214772.1;Name=WP_002214772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214772.1;transl_table=11 NC_014029.1 RefSeq gene 2809168 2809965 . - . ID=gene2593;Name=YPZ3_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS12995;old_locus_tag=YPZ3_2179 NC_014029.1 Protein Homology CDS 2809168 2809965 . - 0 ID=cds2554;Parent=gene2593;Dbxref=Genbank:WP_002209546.1;Name=WP_002209546.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_002209546.1;transl_table=11 NC_014029.1 RefSeq gene 2809969 2811051 . - . ID=gene2594;Name=YPZ3_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13000;old_locus_tag=YPZ3_2180 NC_014029.1 Protein Homology CDS 2809969 2811051 . - 0 ID=cds2555;Parent=gene2594;Dbxref=Genbank:WP_002209545.1;Name=WP_002209545.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209545.1;transl_table=11 NC_014029.1 RefSeq gene 2811729 2814941 . + . ID=gene2595;Name=YPZ3_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13005;old_locus_tag=YPZ3_2181 NC_014029.1 Protein Homology CDS 2811729 2814941 . + 0 ID=cds2556;Parent=gene2595;Dbxref=Genbank:WP_002214773.1;Name=WP_002214773.1;gbkey=CDS;product=autotransporter;protein_id=WP_002214773.1;transl_table=11 NC_014029.1 RefSeq gene 2815119 2815898 . + . ID=gene2596;Name=YPZ3_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13010;old_locus_tag=YPZ3_2182 NC_014029.1 Protein Homology CDS 2815119 2815898 . + 0 ID=cds2557;Parent=gene2596;Dbxref=Genbank:WP_002209540.1;Name=WP_002209540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209540.1;transl_table=11 NC_014029.1 RefSeq gene 2815900 2816397 . + . ID=gene2597;Name=YPZ3_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13015;old_locus_tag=YPZ3_2183 NC_014029.1 Protein Homology CDS 2815900 2816397 . + 0 ID=cds2558;Parent=gene2597;Dbxref=Genbank:WP_002209539.1;Name=WP_002209539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209539.1;transl_table=11 NC_014029.1 RefSeq gene 2816465 2816971 . + . ID=gene2598;Name=YPZ3_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13020;old_locus_tag=YPZ3_2184 NC_014029.1 Protein Homology CDS 2816465 2816971 . + 0 ID=cds2559;Parent=gene2598;Dbxref=Genbank:WP_002209538.1;Name=WP_002209538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209538.1;transl_table=11 NC_014029.1 RefSeq gene 2817217 2818353 . - . ID=gene2599;Name=YPZ3_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13025;old_locus_tag=YPZ3_2185 NC_014029.1 Protein Homology CDS 2817217 2818353 . - 0 ID=cds2560;Parent=gene2599;Dbxref=Genbank:WP_002209537.1;Name=WP_002209537.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_002209537.1;transl_table=11 NC_014029.1 RefSeq gene 2818364 2819632 . - . ID=gene2600;Name=YPZ3_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13030;old_locus_tag=YPZ3_2186 NC_014029.1 Protein Homology CDS 2818364 2819632 . - 0 ID=cds2561;Parent=gene2600;Dbxref=Genbank:WP_002209536.1;Name=WP_002209536.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_002209536.1;transl_table=11 NC_014029.1 RefSeq gene 2819810 2820937 . - . ID=gene2601;Name=YPZ3_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13035;old_locus_tag=YPZ3_2187 NC_014029.1 Protein Homology CDS 2819810 2820937 . - 0 ID=cds2562;Parent=gene2601;Dbxref=Genbank:WP_002209535.1;Name=WP_002209535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209535.1;transl_table=11 NC_014029.1 RefSeq gene 2821129 2822481 . - . ID=gene2602;Name=YPZ3_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13040;old_locus_tag=YPZ3_2188 NC_014029.1 Protein Homology CDS 2821129 2822481 . - 0 ID=cds2563;Parent=gene2602;Dbxref=Genbank:WP_002209534.1;Name=WP_002209534.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_002209534.1;transl_table=11 NC_014029.1 RefSeq gene 2822667 2823509 . - . ID=gene2603;Name=YPZ3_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13045;old_locus_tag=YPZ3_2189 NC_014029.1 Protein Homology CDS 2822667 2823509 . - 0 ID=cds2564;Parent=gene2603;Dbxref=Genbank:WP_002209533.1;Name=WP_002209533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209533.1;transl_table=11 NC_014029.1 RefSeq gene 2823838 2825880 . + . ID=gene2604;Name=YPZ3_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13050;old_locus_tag=YPZ3_2190 NC_014029.1 Protein Homology CDS 2823838 2825880 . + 0 ID=cds2565;Parent=gene2604;Dbxref=Genbank:WP_002209531.1;Name=WP_002209531.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_002209531.1;transl_table=11 NC_014029.1 RefSeq gene 2825884 2826654 . + . ID=gene2605;Name=YPZ3_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13055;old_locus_tag=YPZ3_2191 NC_014029.1 Protein Homology CDS 2825884 2826654 . + 0 ID=cds2566;Parent=gene2605;Dbxref=Genbank:WP_002215483.1;Name=WP_002215483.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_002215483.1;transl_table=11 NC_014029.1 RefSeq gene 2826719 2828053 . - . ID=gene2606;Name=YPZ3_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13060;old_locus_tag=YPZ3_2192 NC_014029.1 Protein Homology CDS 2826719 2828053 . - 0 ID=cds2567;Parent=gene2606;Dbxref=Genbank:WP_002209530.1;Name=WP_002209530.1;gbkey=CDS;product=peptidase M10;protein_id=WP_002209530.1;transl_table=11 NC_014029.1 RefSeq gene 2828301 2829644 . - . ID=gene2607;Name=YPZ3_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13065;old_locus_tag=YPZ3_2193 NC_014029.1 Protein Homology CDS 2828301 2829644 . - 0 ID=cds2568;Parent=gene2607;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NC_014029.1 RefSeq gene 2829891 2830337 . - . ID=gene2608;Name=YPZ3_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13070;old_locus_tag=YPZ3_2194 NC_014029.1 Protein Homology CDS 2829891 2830337 . - 0 ID=cds2569;Parent=gene2608;Dbxref=Genbank:WP_002209528.1;Name=WP_002209528.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_002209528.1;transl_table=11 NC_014029.1 RefSeq gene 2831045 2831380 . + . ID=gene2609;Name=YPZ3_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13075;old_locus_tag=YPZ3_2195 NC_014029.1 Protein Homology CDS 2831045 2831380 . + 0 ID=cds2570;Parent=gene2609;Dbxref=Genbank:WP_002209527.1;Name=WP_002209527.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002209527.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2831403 2832127 . + . ID=id200;gbkey=repeat_region NC_014029.1 RefSeq gene 2831513 2831971 . - . ID=gene2610;Name=YPZ3_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13080;old_locus_tag=YPZ3_2196 NC_014029.1 Protein Homology CDS 2831513 2831971 . - 0 ID=cds2571;Parent=gene2610;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 2831961 2832131 . - . ID=gene2611;Name=YPZ3_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13085 NC_014029.1 Protein Homology CDS 2831961 2832131 . - 0 ID=cds2572;Parent=gene2611;Dbxref=Genbank:WP_025470767.1;Name=WP_025470767.1;gbkey=CDS;product=transposase;protein_id=WP_025470767.1;transl_table=11 NC_014029.1 RefSeq gene 2832237 2833733 . - . ID=gene2612;Name=YPZ3_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13090;old_locus_tag=YPZ3_2197 NC_014029.1 Protein Homology CDS 2832237 2833733 . - 0 ID=cds2573;Parent=gene2612;Dbxref=Genbank:WP_002209526.1;Name=WP_002209526.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_002209526.1;transl_table=11 NC_014029.1 RefSeq gene 2834044 2835240 . + . ID=gene2613;Name=YPZ3_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13095;old_locus_tag=YPZ3_2198 NC_014029.1 Protein Homology CDS 2834044 2835240 . + 0 ID=cds2574;Parent=gene2613;Dbxref=Genbank:WP_002215486.1;Name=WP_002215486.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215486.1;transl_table=11 NC_014029.1 RefSeq gene 2835376 2837931 . - . ID=gene2614;Name=YPZ3_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13100;old_locus_tag=YPZ3_2199 NC_014029.1 Protein Homology CDS 2835376 2837931 . - 0 ID=cds2575;Parent=gene2614;Dbxref=Genbank:WP_002209524.1;Name=WP_002209524.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209524.1;transl_table=11 NC_014029.1 RefSeq gene 2838120 2839643 . + . ID=gene2615;Name=YPZ3_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13105;old_locus_tag=YPZ3_2200 NC_014029.1 Protein Homology CDS 2838120 2839643 . + 0 ID=cds2576;Parent=gene2615;Dbxref=Genbank:WP_002209523.1;Name=WP_002209523.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=WP_002209523.1;transl_table=11 NC_014029.1 RefSeq gene 2839636 2840628 . + . ID=gene2616;Name=YPZ3_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13110;old_locus_tag=YPZ3_2201 NC_014029.1 Protein Homology CDS 2839636 2840628 . + 0 ID=cds2577;Parent=gene2616;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11 NC_014029.1 RefSeq gene 2840659 2841603 . + . ID=gene2617;Name=YPZ3_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13115;old_locus_tag=YPZ3_2202 NC_014029.1 Protein Homology CDS 2840659 2841603 . + 0 ID=cds2578;Parent=gene2617;Dbxref=Genbank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NC_014029.1 RefSeq gene 2841678 2842361 . + . ID=gene2618;Name=YPZ3_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13120;old_locus_tag=YPZ3_2203 NC_014029.1 Protein Homology CDS 2841678 2842361 . + 0 ID=cds2579;Parent=gene2618;Dbxref=Genbank:WP_002209520.1;Name=WP_002209520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209520.1;transl_table=11 NC_014029.1 RefSeq gene 2842387 2843247 . + . ID=gene2619;Name=YPZ3_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13125;old_locus_tag=YPZ3_2204 NC_014029.1 Protein Homology CDS 2842387 2843247 . + 0 ID=cds2580;Parent=gene2619;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11 NC_014029.1 RefSeq gene 2843257 2844264 . + . ID=gene2620;Name=YPZ3_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13130;old_locus_tag=YPZ3_2205 NC_014029.1 Protein Homology CDS 2843257 2844264 . + 0 ID=cds2581;Parent=gene2620;Dbxref=Genbank:WP_002209518.1;Name=WP_002209518.1;gbkey=CDS;product=sugar kinase;protein_id=WP_002209518.1;transl_table=11 NC_014029.1 RefSeq gene 2844449 2845186 . - . ID=gene2621;Name=YPZ3_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13135;old_locus_tag=YPZ3_2206 NC_014029.1 Protein Homology CDS 2844449 2845186 . - 0 ID=cds2582;Parent=gene2621;Dbxref=Genbank:WP_002209516.1;Name=WP_002209516.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209516.1;transl_table=11 NC_014029.1 RefSeq gene 2845186 2845455 . - . ID=gene2622;Name=YPZ3_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13140 NC_014029.1 Protein Homology CDS 2845186 2845455 . - 0 ID=cds2583;Parent=gene2622;Dbxref=Genbank:WP_002215491.1;Name=WP_002215491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215491.1;transl_table=11 NC_014029.1 RefSeq gene 2845950 2846645 . + . ID=gene2623;Name=YPZ3_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13145;old_locus_tag=YPZ3_2207 NC_014029.1 Protein Homology CDS 2845950 2846645 . + 0 ID=cds2584;Parent=gene2623;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11 NC_014029.1 RefSeq gene 2846774 2847769 . + . ID=gene2624;Name=YPZ3_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13150;old_locus_tag=YPZ3_2208 NC_014029.1 Protein Homology CDS 2846774 2847769 . + 0 ID=cds2585;Parent=gene2624;Dbxref=Genbank:WP_002209514.1;Name=WP_002209514.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209514.1;transl_table=11 NC_014029.1 RefSeq gene 2847861 2849177 . - . ID=gene2625;Name=YPZ3_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13155;old_locus_tag=YPZ3_2209 NC_014029.1 Protein Homology CDS 2847861 2849177 . - 0 ID=cds2586;Parent=gene2625;Dbxref=Genbank:WP_002209513.1;Name=WP_002209513.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002209513.1;transl_table=11 NC_014029.1 RefSeq gene 2849394 2849897 . + . ID=gene2626;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPZ3_RS13160;old_locus_tag=YPZ3_2210 NC_014029.1 Protein Homology CDS 2849394 2849897 . + 0 ID=cds2587;Parent=gene2626;Dbxref=Genbank:WP_002209512.1;Name=WP_002209512.1;gbkey=CDS;gene=idnK;product=gluconokinase;protein_id=WP_002209512.1;transl_table=11 NC_014029.1 RefSeq gene 2850079 2850312 . + . ID=gene2627;Name=YPZ3_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13165 NC_014029.1 Protein Homology CDS 2850079 2850312 . + 0 ID=cds2588;Parent=gene2627;Dbxref=Genbank:WP_002209511.1;Name=WP_002209511.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002209511.1;transl_table=11 NC_014029.1 RefSeq gene 2850503 2850643 . + . ID=gene2628;Name=YPZ3_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13170 NC_014029.1 Protein Homology CDS 2850503 2850643 . + 0 ID=cds2589;Parent=gene2628;Dbxref=Genbank:WP_002209510.1;Name=WP_002209510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209510.1;transl_table=11 NC_014029.1 RefSeq gene 2850698 2851087 . + . ID=gene2629;Name=YPZ3_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13175;old_locus_tag=YPZ3_2211 NC_014029.1 Protein Homology CDS 2850698 2851087 . + 0 ID=cds2590;Parent=gene2629;Dbxref=Genbank:WP_002209509.1;Name=WP_002209509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209509.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2851134 2851236 . + . ID=id201;gbkey=repeat_region NC_014029.1 RefSeq gene 2851327 2851920 . - . ID=gene2630;Name=YPZ3_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13180;old_locus_tag=YPZ3_2212 NC_014029.1 Protein Homology CDS 2851327 2851920 . - 0 ID=cds2591;Parent=gene2630;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11 NC_014029.1 RefSeq gene 2852278 2853381 . + . ID=gene2631;Name=YPZ3_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13185;old_locus_tag=YPZ3_2213 NC_014029.1 Protein Homology CDS 2852278 2853381 . + 0 ID=cds2592;Parent=gene2631;Dbxref=Genbank:WP_002209507.1;Name=WP_002209507.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NC_014029.1 RefSeq gene 2853550 2853831 . + . ID=gene2632;Name=YPZ3_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13190 NC_014029.1 Protein Homology CDS 2853550 2853831 . + 0 ID=cds2593;Parent=gene2632;Dbxref=Genbank:WP_002214584.1;Name=WP_002214584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214584.1;transl_table=11 NC_014029.1 RefSeq gene 2854147 2854446 . + . ID=gene2633;Name=YPZ3_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13195 NC_014029.1 Protein Homology CDS 2854147 2854446 . + 0 ID=cds2594;Parent=gene2633;Dbxref=Genbank:WP_002209505.1;Name=WP_002209505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209505.1;transl_table=11 NC_014029.1 RefSeq gene 2854453 2854740 . + . ID=gene2634;Name=YPZ3_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13200 NC_014029.1 Protein Homology CDS 2854453 2854740 . + 0 ID=cds2595;Parent=gene2634;Dbxref=Genbank:WP_002209504.1;Name=WP_002209504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209504.1;transl_table=11 NC_014029.1 RefSeq gene 2854831 2855172 . - . ID=gene2635;Name=YPZ3_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13205 NC_014029.1 Protein Homology CDS 2854831 2855172 . - 0 ID=cds2596;Parent=gene2635;Dbxref=Genbank:WP_011171941.1;Name=WP_011171941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171941.1;transl_table=11 NC_014029.1 RefSeq gene 2856716 2865517 . + . ID=gene2636;Name=YPZ3_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13210;old_locus_tag=YPZ3_2214 NC_014029.1 Protein Homology CDS 2856716 2865517 . + 0 ID=cds2597;Parent=gene2636;Dbxref=Genbank:WP_002209503.1;Name=WP_002209503.1;gbkey=CDS;product=invasin;protein_id=WP_002209503.1;transl_table=11 NC_014029.1 RefSeq gene 2865725 2867422 . - . ID=gene2637;Name=YPZ3_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13215;old_locus_tag=YPZ3_2215 NC_014029.1 Protein Homology CDS 2865725 2867422 . - 0 ID=cds2598;Parent=gene2637;Dbxref=Genbank:WP_002209502.1;Name=WP_002209502.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002209502.1;transl_table=11 NC_014029.1 RefSeq gene 2867928 2870112 . + . ID=gene2638;Name=YPZ3_RS13220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13220;old_locus_tag=YPZ3_2216;pseudo=true NC_014029.1 Protein Homology CDS 2867928 2870112 . + 0 ID=cds2599;Parent=gene2638;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycogen branching protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2870114 2872102 . + . ID=gene2639;Name=YPZ3_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13225;old_locus_tag=YPZ3_2217 NC_014029.1 Protein Homology CDS 2870114 2872102 . + 0 ID=cds2600;Parent=gene2639;Dbxref=Genbank:WP_002209499.1;Name=WP_002209499.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_002209499.1;transl_table=11 NC_014029.1 RefSeq gene 2872112 2873542 . + . ID=gene2640;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YPZ3_RS13230;old_locus_tag=YPZ3_2218 NC_014029.1 Protein Homology CDS 2872112 2873542 . + 0 ID=cds2601;Parent=gene2640;Dbxref=Genbank:WP_002214589.1;Name=WP_002214589.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_002214589.1;transl_table=11 NC_014029.1 RefSeq gene 2873610 2875040 . + . ID=gene2641;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YPZ3_RS13235;old_locus_tag=YPZ3_2219 NC_014029.1 Protein Homology CDS 2873610 2875040 . + 0 ID=cds2602;Parent=gene2641;Dbxref=Genbank:WP_002209498.1;Name=WP_002209498.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_002209498.1;transl_table=11 NC_014029.1 RefSeq gene 2875193 2877640 . + . ID=gene2642;Name=YPZ3_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13240;old_locus_tag=YPZ3_2220 NC_014029.1 Protein Homology CDS 2875193 2877640 . + 0 ID=cds2603;Parent=gene2642;Dbxref=Genbank:WP_013060332.1;Name=WP_013060332.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_013060332.1;transl_table=11 NC_014029.1 RefSeq gene 2877803 2879317 . - . ID=gene2643;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=YPZ3_RS13245;old_locus_tag=YPZ3_2221 NC_014029.1 Protein Homology CDS 2877803 2879317 . - 0 ID=cds2604;Parent=gene2643;Dbxref=Genbank:WP_002226019.1;Name=WP_002226019.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002226019.1;transl_table=11 NC_014029.1 RefSeq gene 2879716 2880090 . + . ID=gene2644;Name=YPZ3_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13250 NC_014029.1 Protein Homology CDS 2879716 2880090 . + 0 ID=cds2605;Parent=gene2644;Dbxref=Genbank:WP_002217865.1;Name=WP_002217865.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217865.1;transl_table=11 NC_014029.1 RefSeq gene 2880399 2880863 . + . ID=gene2645;Name=YPZ3_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13255;old_locus_tag=YPZ3_2222 NC_014029.1 Protein Homology CDS 2880399 2880863 . + 0 ID=cds2606;Parent=gene2645;Dbxref=Genbank:WP_002209495.1;Name=WP_002209495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209495.1;transl_table=11 NC_014029.1 RefSeq gene 2881028 2881297 . + . ID=gene2646;Name=YPZ3_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13260 NC_014029.1 Protein Homology CDS 2881028 2881297 . + 0 ID=cds2607;Parent=gene2646;Dbxref=Genbank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2881405 2884761 . + . ID=id202;gbkey=repeat_region NC_014029.1 RefSeq gene 2881652 2882437 . - . ID=gene2647;Name=YPZ3_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13265;old_locus_tag=YPZ3_2223 NC_014029.1 Protein Homology CDS 2881652 2882437 . - 0 ID=cds2608;Parent=gene2647;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_014029.1 RefSeq gene 2882491 2882805 . - . ID=gene2648;Name=YPZ3_RS13270;end_range=2882805,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13270;old_locus_tag=YPZ3_2224;partial=true;pseudo=true NC_014029.1 Protein Homology CDS 2882491 2882805 . - 0 ID=cds2609;Parent=gene2648;end_range=2882805,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2882892 2883914 . + . ID=gene2649;Name=YPZ3_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13275;old_locus_tag=YPZ3_2225 NC_014029.1 Protein Homology CDS 2882892 2883914 . + 0 ID=cds2610;Parent=gene2649;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 2883914 2884693 . + . ID=gene2650;Name=YPZ3_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13280;old_locus_tag=YPZ3_2226 NC_014029.1 Protein Homology CDS 2883914 2884693 . + 0 ID=cds2611;Parent=gene2650;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2884864 2885038 . + . ID=id203;gbkey=repeat_region NC_014029.1 RefSeq gene 2885555 2886565 . - . ID=gene2651;Name=YPZ3_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13285;old_locus_tag=YPZ3_2227 NC_014029.1 Protein Homology CDS 2885555 2886565 . - 0 ID=cds2612;Parent=gene2651;Dbxref=Genbank:WP_002210239.1;Name=WP_002210239.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_002210239.1;transl_table=11 NC_014029.1 RefSeq gene 2886853 2887113 . + . ID=gene2652;Name=YPZ3_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13290 NC_014029.1 Protein Homology CDS 2886853 2887113 . + 0 ID=cds2613;Parent=gene2652;Dbxref=Genbank:WP_002210240.1;Name=WP_002210240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210240.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2887277 2887450 . + . ID=id204;gbkey=repeat_region NC_014029.1 RefSeq gene 2887495 2888454 . - . ID=gene2653;Name=YPZ3_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13295;old_locus_tag=YPZ3_2228 NC_014029.1 Protein Homology CDS 2887495 2888454 . - 0 ID=cds2614;Parent=gene2653;Dbxref=Genbank:WP_002210242.1;Name=WP_002210242.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210242.1;transl_table=11 NC_014029.1 RefSeq gene 2888520 2889935 . - . ID=gene2654;Name=YPZ3_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13300;old_locus_tag=YPZ3_2229 NC_014029.1 Protein Homology CDS 2888520 2889935 . - 0 ID=cds2615;Parent=gene2654;Dbxref=Genbank:WP_002210243.1;Name=WP_002210243.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_002210243.1;transl_table=11 NC_014029.1 RefSeq gene 2889923 2890894 . - . ID=gene2655;Name=YPZ3_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13305;old_locus_tag=YPZ3_2230 NC_014029.1 Protein Homology CDS 2889923 2890894 . - 0 ID=cds2616;Parent=gene2655;Dbxref=Genbank:WP_002210244.1;Name=WP_002210244.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_002210244.1;transl_table=11 NC_014029.1 RefSeq gene 2890894 2891751 . - . ID=gene2656;Name=YPZ3_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13310;old_locus_tag=YPZ3_2231 NC_014029.1 Protein Homology CDS 2890894 2891751 . - 0 ID=cds2617;Parent=gene2656;Dbxref=Genbank:WP_002210245.1;Name=WP_002210245.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=naphthoate synthase;protein_id=WP_002210245.1;transl_table=11 NC_014029.1 RefSeq gene 2891765 2892583 . - . ID=gene2657;Name=YPZ3_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13315;old_locus_tag=YPZ3_2232 NC_014029.1 Protein Homology CDS 2891765 2892583 . - 0 ID=cds2618;Parent=gene2657;Dbxref=Genbank:WP_002210246.1;Name=WP_002210246.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002210246.1;transl_table=11 NC_014029.1 RefSeq gene 2892580 2894283 . - . ID=gene2658;Name=YPZ3_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13320;old_locus_tag=YPZ3_2233 NC_014029.1 Protein Homology CDS 2892580 2894283 . - 0 ID=cds2619;Parent=gene2658;Dbxref=Genbank:WP_002210247.1;Name=WP_002210247.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_002210247.1;transl_table=11 NC_014029.1 RefSeq gene 2894511 2895878 . - . ID=gene2659;Name=YPZ3_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13325;old_locus_tag=YPZ3_2234 NC_014029.1 Protein Homology CDS 2894511 2895878 . - 0 ID=cds2620;Parent=gene2659;Dbxref=Genbank:WP_002210248.1;Name=WP_002210248.1;gbkey=CDS;product=menaquinone-specific isochorismate synthase;protein_id=WP_002210248.1;transl_table=11 NC_014029.1 RefSeq gene 2896406 2897050 . - . ID=gene2660;Name=YPZ3_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13330;old_locus_tag=YPZ3_2235 NC_014029.1 Protein Homology CDS 2896406 2897050 . - 0 ID=cds2621;Parent=gene2660;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11 NC_014029.1 RefSeq gene 2897605 2897913 . - . ID=gene2661;Name=YPZ3_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13335;old_locus_tag=YPZ3_2236 NC_014029.1 Protein Homology CDS 2897605 2897913 . - 0 ID=cds2622;Parent=gene2661;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11 NC_014029.1 RefSeq gene 2898477 2898620 . + . ID=gene2662;Name=YPZ3_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13340 NC_014029.1 Protein Homology CDS 2898477 2898620 . + 0 ID=cds2623;Parent=gene2662;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11 NC_014029.1 RefSeq gene 2898561 2898773 . - . ID=gene2663;Name=YPZ3_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13345 NC_014029.1 Protein Homology CDS 2898561 2898773 . - 0 ID=cds2624;Parent=gene2663;Dbxref=Genbank:WP_002215888.1;Name=WP_002215888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215888.1;transl_table=11 NC_014029.1 RefSeq gene 2898839 2900710 . - . ID=gene2664;Name=YPZ3_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13350;old_locus_tag=YPZ3_2237 NC_014029.1 Protein Homology CDS 2898839 2900710 . - 0 ID=cds2625;Parent=gene2664;Dbxref=Genbank:WP_002210254.1;Name=WP_002210254.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_002210254.1;transl_table=11 NC_014029.1 RefSeq gene 2900720 2901235 . - . ID=gene2665;Name=YPZ3_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13355;old_locus_tag=YPZ3_2238 NC_014029.1 Protein Homology CDS 2900720 2901235 . - 0 ID=cds2626;Parent=gene2665;Dbxref=Genbank:WP_002210255.1;Name=WP_002210255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210255.1;transl_table=11 NC_014029.1 RefSeq gene 2901265 2902581 . - . ID=gene2666;Name=YPZ3_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13360;old_locus_tag=YPZ3_2239 NC_014029.1 Protein Homology CDS 2901265 2902581 . - 0 ID=cds2627;Parent=gene2666;Dbxref=Genbank:WP_002215889.1;Name=WP_002215889.1;gbkey=CDS;product=2-ketogluconate transporter;protein_id=WP_002215889.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2902934 2903106 . + . ID=id205;gbkey=repeat_region NC_014029.1 RefSeq gene 2903127 2904077 . - . ID=gene2667;Name=YPZ3_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13365;old_locus_tag=YPZ3_2240 NC_014029.1 Protein Homology CDS 2903127 2904077 . - 0 ID=cds2628;Parent=gene2667;Dbxref=Genbank:WP_002210257.1;Name=WP_002210257.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002210257.1;transl_table=11 NC_014029.1 RefSeq gene 2904096 2904218 . - . ID=gene2668;Name=YPZ3_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13370 NC_014029.1 Protein Homology CDS 2904096 2904218 . - 0 ID=cds2629;Parent=gene2668;Dbxref=Genbank:WP_002210258.1;Name=WP_002210258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210258.1;transl_table=11 NC_014029.1 RefSeq gene 2904543 2905535 . - . ID=gene2669;Name=YPZ3_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13375;old_locus_tag=YPZ3_2241 NC_014029.1 Protein Homology CDS 2904543 2905535 . - 0 ID=cds2630;Parent=gene2669;Dbxref=Genbank:WP_002210260.1;Name=WP_002210260.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210260.1;transl_table=11 NC_014029.1 RefSeq gene 2906004 2907287 . + . ID=gene2670;Name=YPZ3_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13380;old_locus_tag=YPZ3_2242 NC_014029.1 Protein Homology CDS 2906004 2907287 . + 0 ID=cds2631;Parent=gene2670;Dbxref=Genbank:WP_002210262.1;Name=WP_002210262.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210262.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2907840 2908017 . + . ID=id206;gbkey=repeat_region NC_014029.1 RefSeq gene 2908046 2908810 . + . ID=gene2671;Name=YPZ3_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13385;old_locus_tag=YPZ3_2243 NC_014029.1 Protein Homology CDS 2908046 2908810 . + 0 ID=cds2632;Parent=gene2671;Dbxref=Genbank:WP_002210264.1;Name=WP_002210264.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_002210264.1;transl_table=11 NC_014029.1 RefSeq gene 2908859 2909395 . + . ID=gene2672;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPZ3_RS13390;old_locus_tag=YPZ3_2244 NC_014029.1 Protein Homology CDS 2908859 2909395 . + 0 ID=cds2633;Parent=gene2672;Dbxref=Genbank:WP_002210265.1;Name=WP_002210265.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_002210265.1;transl_table=11 NC_014029.1 RefSeq gene 2909473 2909940 . + . ID=gene2673;Name=YPZ3_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13395;old_locus_tag=YPZ3_2245 NC_014029.1 Protein Homology CDS 2909473 2909940 . + 0 ID=cds2634;Parent=gene2673;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11 NC_014029.1 RefSeq gene 2910285 2911475 . - . ID=gene2674;Name=YPZ3_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13400;old_locus_tag=YPZ3_2246 NC_014029.1 Protein Homology CDS 2910285 2911475 . - 0 ID=cds2635;Parent=gene2674;Dbxref=Genbank:WP_002210267.1;Name=WP_002210267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210267.1;transl_table=11 NC_014029.1 RefSeq gene 2911711 2913174 . - . ID=gene2675;Name=YPZ3_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13405;old_locus_tag=YPZ3_2247 NC_014029.1 Protein Homology CDS 2911711 2913174 . - 0 ID=cds2636;Parent=gene2675;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11 NC_014029.1 RefSeq gene 2913181 2914713 . - . ID=gene2676;Name=YPZ3_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13410;old_locus_tag=YPZ3_2248 NC_014029.1 Protein Homology CDS 2913181 2914713 . - 0 ID=cds2637;Parent=gene2676;Dbxref=Genbank:WP_002210269.1;Name=WP_002210269.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NC_014029.1 RefSeq gene 2914753 2916597 . - . ID=gene2677;Name=YPZ3_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13415;old_locus_tag=YPZ3_2249 NC_014029.1 Protein Homology CDS 2914753 2916597 . - 0 ID=cds2638;Parent=gene2677;Dbxref=Genbank:WP_002210270.1;Name=WP_002210270.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_002210270.1;transl_table=11 NC_014029.1 RefSeq gene 2916594 2916896 . - . ID=gene2678;Name=YPZ3_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13420;old_locus_tag=YPZ3_2250 NC_014029.1 Protein Homology CDS 2916594 2916896 . - 0 ID=cds2639;Parent=gene2678;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11 NC_014029.1 RefSeq gene 2916893 2917438 . - . ID=gene2679;Name=YPZ3_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13425;old_locus_tag=YPZ3_2251 NC_014029.1 Protein Homology CDS 2916893 2917438 . - 0 ID=cds2640;Parent=gene2679;Dbxref=Genbank:WP_002210272.1;Name=WP_002210272.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NC_014029.1 RefSeq gene 2917451 2917993 . - . ID=gene2680;Name=YPZ3_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13430;old_locus_tag=YPZ3_2252 NC_014029.1 Protein Homology CDS 2917451 2917993 . - 0 ID=cds2641;Parent=gene2680;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11 NC_014029.1 RefSeq gene 2918008 2918985 . - . ID=gene2681;Name=YPZ3_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13435;old_locus_tag=YPZ3_2253 NC_014029.1 Protein Homology CDS 2918008 2918985 . - 0 ID=cds2642;Parent=gene2681;Dbxref=Genbank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_002210274.1;transl_table=11 NC_014029.1 RefSeq gene 2918982 2921726 . - . ID=gene2682;Name=YPZ3_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13440;old_locus_tag=YPZ3_2254 NC_014029.1 Protein Homology CDS 2918982 2921726 . - 0 ID=cds2643;Parent=gene2682;Dbxref=Genbank:WP_002210275.1;Name=WP_002210275.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_002210275.1;transl_table=11 NC_014029.1 RefSeq gene 2921813 2923198 . - . ID=gene2683;Name=YPZ3_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13445;old_locus_tag=YPZ3_2255 NC_014029.1 Protein Homology CDS 2921813 2923198 . - 0 ID=cds2644;Parent=gene2683;Dbxref=Genbank:WP_002210276.1;Name=WP_002210276.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_002210276.1;transl_table=11 NC_014029.1 RefSeq gene 2923195 2923758 . - . ID=gene2684;Name=YPZ3_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13450;old_locus_tag=YPZ3_2256 NC_014029.1 Protein Homology CDS 2923195 2923758 . - 0 ID=cds2645;Parent=gene2684;Dbxref=Genbank:WP_002228514.1;Name=WP_002228514.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_002228514.1;transl_table=11 NC_014029.1 RefSeq gene 2923761 2925557 . - . ID=gene2685;Name=YPZ3_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13455;old_locus_tag=YPZ3_2257 NC_014029.1 Protein Homology CDS 2923761 2925557 . - 0 ID=cds2646;Parent=gene2685;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NC_014029.1 RefSeq gene 2925698 2926375 . - . ID=gene2686;Name=YPZ3_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13460;old_locus_tag=YPZ3_2258 NC_014029.1 Protein Homology CDS 2925698 2926375 . - 0 ID=cds2647;Parent=gene2686;Dbxref=Genbank:WP_002210278.1;Name=WP_002210278.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002210278.1;transl_table=11 NC_014029.1 RefSeq gene 2926477 2926977 . - . ID=gene2687;Name=YPZ3_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13465;old_locus_tag=YPZ3_2259 NC_014029.1 Protein Homology CDS 2926477 2926977 . - 0 ID=cds2648;Parent=gene2687;Dbxref=Genbank:WP_002210279.1;Name=WP_002210279.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NC_014029.1 RefSeq gene 2927655 2928587 . - . ID=gene2688;Name=YPZ3_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13470;old_locus_tag=YPZ3_2260 NC_014029.1 Protein Homology CDS 2927655 2928587 . - 0 ID=cds2649;Parent=gene2688;Dbxref=Genbank:WP_002210280.1;Name=WP_002210280.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210280.1;transl_table=11 NC_014029.1 RefSeq gene 2929038 2929310 . - . ID=gene2689;Name=YPZ3_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13475 NC_014029.1 Protein Homology CDS 2929038 2929310 . - 0 ID=cds2650;Parent=gene2689;Dbxref=Genbank:WP_002217838.1;Name=WP_002217838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217838.1;transl_table=11 NC_014029.1 RefSeq gene 2929443 2930657 . + . ID=gene2690;Name=YPZ3_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13480;old_locus_tag=YPZ3_2261 NC_014029.1 Protein Homology CDS 2929443 2930657 . + 0 ID=cds2651;Parent=gene2690;Dbxref=Genbank:WP_002210282.1;Name=WP_002210282.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=WP_002210282.1;transl_table=11 NC_014029.1 RefSeq gene 2930808 2931401 . + . ID=gene2691;Name=YPZ3_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13485;old_locus_tag=YPZ3_2262 NC_014029.1 Protein Homology CDS 2930808 2931401 . + 0 ID=cds2652;Parent=gene2691;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11 NC_014029.1 RefSeq gene 2931448 2931639 . - . ID=gene2692;Name=YPZ3_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13490 NC_014029.1 Protein Homology CDS 2931448 2931639 . - 0 ID=cds2653;Parent=gene2692;Dbxref=Genbank:WP_002216053.1;Name=WP_002216053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216053.1;transl_table=11 NC_014029.1 RefSeq gene 2931744 2933576 . - . ID=gene2693;Name=YPZ3_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13495;old_locus_tag=YPZ3_2263 NC_014029.1 Protein Homology CDS 2931744 2933576 . - 0 ID=cds2654;Parent=gene2693;Dbxref=Genbank:WP_002227880.1;Name=WP_002227880.1;gbkey=CDS;product=citrate transporter;protein_id=WP_002227880.1;transl_table=11 NC_014029.1 RefSeq gene 2933868 2934524 . - . ID=gene2694;Name=YPZ3_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13500;old_locus_tag=YPZ3_2264 NC_014029.1 Protein Homology CDS 2933868 2934524 . - 0 ID=cds2655;Parent=gene2694;Dbxref=Genbank:WP_002210285.1;Name=WP_002210285.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210285.1;transl_table=11 NC_014029.1 RefSeq gene 2934689 2935183 . - . ID=gene2695;Name=YPZ3_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13505;old_locus_tag=YPZ3_2265 NC_014029.1 Protein Homology CDS 2934689 2935183 . - 0 ID=cds2656;Parent=gene2695;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11 NC_014029.1 RefSeq gene 2935499 2935954 . - . ID=gene2696;Name=YPZ3_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13510;old_locus_tag=YPZ3_2266 NC_014029.1 Protein Homology CDS 2935499 2935954 . - 0 ID=cds2657;Parent=gene2696;Dbxref=Genbank:WP_002210287.1;Name=WP_002210287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210287.1;transl_table=11 NC_014029.1 RefSeq gene 2936195 2936386 . + . ID=gene2697;Name=YPZ3_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13515 NC_014029.1 Protein Homology CDS 2936195 2936386 . + 0 ID=cds2658;Parent=gene2697;Dbxref=Genbank:WP_002216055.1;Name=WP_002216055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216055.1;transl_table=11 NC_014029.1 RefSeq gene 2936376 2937578 . + . ID=gene2698;Name=YPZ3_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13520;old_locus_tag=YPZ3_2267 NC_014029.1 Protein Homology CDS 2936376 2937578 . + 0 ID=cds2659;Parent=gene2698;Dbxref=Genbank:WP_002210288.1;Name=WP_002210288.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_002210288.1;transl_table=11 NC_014029.1 RefSeq gene 2937761 2939899 . + . ID=gene2699;Name=YPZ3_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13525;old_locus_tag=YPZ3_2268 NC_014029.1 Protein Homology CDS 2937761 2939899 . + 0 ID=cds2660;Parent=gene2699;Dbxref=Genbank:WP_002265141.1;Name=WP_002265141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2939913 2940083 . + . ID=id207;gbkey=repeat_region NC_014029.1 RefSeq gene 2940165 2941199 . - . ID=gene2700;Name=YPZ3_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13530;old_locus_tag=YPZ3_2269 NC_014029.1 Protein Homology CDS 2940165 2941199 . - 0 ID=cds2661;Parent=gene2700;Dbxref=Genbank:WP_002216059.1;Name=WP_002216059.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002216059.1;transl_table=11 NC_014029.1 RefSeq gene 2941566 2942009 . + . ID=gene2701;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=YPZ3_RS13535;old_locus_tag=YPZ3_2270 NC_014029.1 Protein Homology CDS 2941566 2942009 . + 0 ID=cds2662;Parent=gene2701;Dbxref=Genbank:WP_002210291.1;Name=WP_002210291.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_002210291.1;transl_table=11 NC_014029.1 RefSeq gene 2942178 2942432 . + . ID=gene2702;Name=YPZ3_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13540 NC_014029.1 Protein Homology CDS 2942178 2942432 . + 0 ID=cds2663;Parent=gene2702;Dbxref=Genbank:WP_002210293.1;Name=WP_002210293.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002210293.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2942417 2943734 . + . ID=id208;gbkey=repeat_region NC_014029.1 RefSeq gene 2942454 2943662 . - . ID=gene2703;Name=YPZ3_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13545;old_locus_tag=YPZ3_2271 NC_014029.1 Protein Homology CDS 2942454 2943662 . - 0 ID=cds2664;Parent=gene2703;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 2943696 2944574 . - . ID=gene2704;Name=YPZ3_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13550;old_locus_tag=YPZ3_2272 NC_014029.1 Protein Homology CDS 2943696 2944574 . - 0 ID=cds2665;Parent=gene2704;Dbxref=Genbank:WP_002214717.1;Name=WP_002214717.1;gbkey=CDS;product=transglycosylase;protein_id=WP_002214717.1;transl_table=11 NC_014029.1 RefSeq gene 2944631 2950609 . - . ID=gene2705;Name=YPZ3_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13555;old_locus_tag=YPZ3_2273 NC_014029.1 Protein Homology CDS 2944631 2950609 . - 0 ID=cds2666;Parent=gene2705;Dbxref=Genbank:WP_002210294.1;Name=WP_002210294.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210294.1;transl_table=11 NC_014029.1 RefSeq gene 2951016 2951564 . - . ID=gene2706;Name=YPZ3_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13560;old_locus_tag=YPZ3_2274 NC_014029.1 Protein Homology CDS 2951016 2951564 . - 0 ID=cds2667;Parent=gene2706;Dbxref=Genbank:WP_002214718.1;Name=WP_002214718.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214718.1;transl_table=11 NC_014029.1 RefSeq repeat_region 2951925 2952194 . + . ID=id209;gbkey=repeat_region NC_014029.1 RefSeq gene 2952198 2953052 . - . ID=gene2707;Name=YPZ3_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13565;old_locus_tag=YPZ3_2275 NC_014029.1 Protein Homology CDS 2952198 2953052 . - 0 ID=cds2668;Parent=gene2707;Dbxref=Genbank:WP_002210296.1;Name=WP_002210296.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_002210296.1;transl_table=11 NC_014029.1 RefSeq gene 2953358 2954884 . + . ID=gene2708;Name=YPZ3_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13570;old_locus_tag=YPZ3_2276 NC_014029.1 Protein Homology CDS 2953358 2954884 . + 0 ID=cds2669;Parent=gene2708;Dbxref=Genbank:WP_002210297.1;Name=WP_002210297.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002210297.1;transl_table=11 NC_014029.1 RefSeq gene 2954919 2956844 . + . ID=gene2709;Name=YPZ3_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13575;old_locus_tag=YPZ3_2277 NC_014029.1 Protein Homology CDS 2954919 2956844 . + 0 ID=cds2670;Parent=gene2709;Dbxref=Genbank:WP_002359655.1;Name=WP_002359655.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_002359655.1;transl_table=11 NC_014029.1 RefSeq gene 2957138 2958123 . + . ID=gene2710;Name=YPZ3_RS13580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13580;pseudo=true NC_014029.1 Protein Homology CDS 2957138 2958123 . + 0 ID=cds2671;Parent=gene2710;exception=annotated by transcript or proteomic data;gbkey=CDS;product=inositol 2-dehydrogenase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2958249 2959178 . + . ID=gene2711;Name=YPZ3_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13585;old_locus_tag=YPZ3_2280 NC_014029.1 Protein Homology CDS 2958249 2959178 . + 0 ID=cds2672;Parent=gene2711;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11 NC_014029.1 RefSeq gene 2959227 2960774 . + . ID=gene2712;Name=YPZ3_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13590;old_locus_tag=YPZ3_2281 NC_014029.1 Protein Homology CDS 2959227 2960774 . + 0 ID=cds2673;Parent=gene2712;Dbxref=Genbank:WP_002223323.1;Name=WP_002223323.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_002223323.1;transl_table=11 NC_014029.1 RefSeq gene 2960786 2961814 . + . ID=gene2713;Name=YPZ3_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13595;old_locus_tag=YPZ3_2282 NC_014029.1 Protein Homology CDS 2960786 2961814 . + 0 ID=cds2674;Parent=gene2713;Dbxref=Genbank:WP_002210302.1;Name=WP_002210302.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NC_014029.1 RefSeq gene 2961838 2962971 . + . ID=gene2714;Name=YPZ3_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13600;old_locus_tag=YPZ3_2283 NC_014029.1 Protein Homology CDS 2961838 2962971 . + 0 ID=cds2675;Parent=gene2714;Dbxref=Genbank:WP_002210303.1;Name=WP_002210303.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_002210303.1;transl_table=11 NC_014029.1 RefSeq gene 2963096 2964973 . + . ID=gene2715;Name=YPZ3_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13605;old_locus_tag=YPZ3_2284 NC_014029.1 Protein Homology CDS 2963096 2964973 . + 0 ID=cds2676;Parent=gene2715;Dbxref=Genbank:WP_002222597.1;Name=WP_002222597.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_002222597.1;transl_table=11 NC_014029.1 RefSeq gene 2965126 2966046 . + . ID=gene2716;Name=YPZ3_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13610;old_locus_tag=YPZ3_2285 NC_014029.1 Protein Homology CDS 2965126 2966046 . + 0 ID=cds2677;Parent=gene2716;Dbxref=Genbank:WP_002227877.1;Name=WP_002227877.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_002227877.1;transl_table=11 NC_014029.1 RefSeq gene 2966056 2966871 . + . ID=gene2717;Name=YPZ3_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13615;old_locus_tag=YPZ3_2286 NC_014029.1 Protein Homology CDS 2966056 2966871 . + 0 ID=cds2678;Parent=gene2717;Dbxref=Genbank:WP_002210306.1;Name=WP_002210306.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_002210306.1;transl_table=11 NC_014029.1 RefSeq gene 2967030 2967233 . + . ID=gene2718;Name=YPZ3_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13620 NC_014029.1 Protein Homology CDS 2967030 2967233 . + 0 ID=cds2679;Parent=gene2718;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11 NC_014029.1 RefSeq gene 2967441 2969231 . + . ID=gene2719;Name=YPZ3_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13625;old_locus_tag=YPZ3_2288 NC_014029.1 Protein Homology CDS 2967441 2969231 . + 0 ID=cds2680;Parent=gene2719;Dbxref=Genbank:WP_002214723.1;Name=WP_002214723.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002214723.1;transl_table=11 NC_014029.1 RefSeq gene 2969247 2969534 . - . ID=gene2720;Name=YPZ3_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13630 NC_014029.1 Protein Homology CDS 2969247 2969534 . - 0 ID=cds2681;Parent=gene2720;Dbxref=Genbank:WP_002210309.1;Name=WP_002210309.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002210309.1;transl_table=11 NC_014029.1 RefSeq gene 2969977 2970171 . + . ID=gene2721;Name=YPZ3_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13635 NC_014029.1 Protein Homology CDS 2969977 2970171 . + 0 ID=cds2682;Parent=gene2721;Dbxref=Genbank:WP_002210310.1;Name=WP_002210310.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_002210310.1;transl_table=11 NC_014029.1 RefSeq gene 2970189 2970371 . - . ID=gene2722;Name=YPZ3_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13640 NC_014029.1 Protein Homology CDS 2970189 2970371 . - 0 ID=cds2683;Parent=gene2722;Dbxref=Genbank:WP_002210311.1;Name=WP_002210311.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210311.1;transl_table=11 NC_014029.1 RefSeq gene 2970553 2971518 . - . ID=gene2723;Name=YPZ3_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13645;old_locus_tag=YPZ3_2289 NC_014029.1 Protein Homology CDS 2970553 2971518 . - 0 ID=cds2684;Parent=gene2723;Dbxref=Genbank:WP_002210312.1;Name=WP_002210312.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210312.1;transl_table=11 NC_014029.1 RefSeq gene 2971968 2972558 . + . ID=gene2724;Name=YPZ3_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13650;old_locus_tag=YPZ3_2290 NC_014029.1 Protein Homology CDS 2971968 2972558 . + 0 ID=cds2685;Parent=gene2724;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NC_014029.1 RefSeq gene 2972878 2973249 . - . ID=gene2725;Name=YPZ3_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13655;old_locus_tag=YPZ3_2291 NC_014029.1 Protein Homology CDS 2972878 2973249 . - 0 ID=cds2686;Parent=gene2725;Dbxref=Genbank:WP_002214726.1;Name=WP_002214726.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002214726.1;transl_table=11 NC_014029.1 cmsearch region 2973462 2973890 . + . ID=id210;Note=cspA;gbkey=misc_feature NC_014029.1 RefSeq gene 2973635 2973844 . + . ID=gene2726;Name=YPZ3_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13660 NC_014029.1 Protein Homology CDS 2973635 2973844 . + 0 ID=cds2687;Parent=gene2726;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11 NC_014029.1 RefSeq gene 2974267 2974650 . - . ID=gene2727;Name=YPZ3_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13665;old_locus_tag=YPZ3_2292 NC_014029.1 Protein Homology CDS 2974267 2974650 . - 0 ID=cds2688;Parent=gene2727;Dbxref=Genbank:WP_002210317.1;Name=WP_002210317.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_002210317.1;transl_table=11 NC_014029.1 RefSeq gene 2975010 2975162 . + . ID=gene2728;Name=YPZ3_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13670 NC_014029.1 Protein Homology CDS 2975010 2975162 . + 0 ID=cds2689;Parent=gene2728;Dbxref=Genbank:WP_002210318.1;Name=WP_002210318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210318.1;transl_table=11 NC_014029.1 RefSeq gene 2975217 2975474 . + . ID=gene2729;Name=YPZ3_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13675 NC_014029.1 Protein Homology CDS 2975217 2975474 . + 0 ID=cds2690;Parent=gene2729;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11 NC_014029.1 RefSeq gene 2975655 2976620 . - . ID=gene2730;Name=YPZ3_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13680;old_locus_tag=YPZ3_2293 NC_014029.1 Protein Homology CDS 2975655 2976620 . - 0 ID=cds2691;Parent=gene2730;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NC_014029.1 RefSeq gene 2976813 2977514 . - . ID=gene2731;Name=YPZ3_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13685;old_locus_tag=YPZ3_2294 NC_014029.1 Protein Homology CDS 2976813 2977514 . - 0 ID=cds2692;Parent=gene2731;Dbxref=Genbank:WP_002218201.1;Name=WP_002218201.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_002218201.1;transl_table=11 NC_014029.1 RefSeq gene 2977726 2977989 . - . ID=gene2732;Name=YPZ3_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13690 NC_014029.1 Protein Homology CDS 2977726 2977989 . - 0 ID=cds2693;Parent=gene2732;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11 NC_014029.1 RefSeq gene 2978187 2979389 . - . ID=gene2733;Name=YPZ3_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13695;old_locus_tag=YPZ3_2295 NC_014029.1 Protein Homology CDS 2978187 2979389 . - 0 ID=cds2694;Parent=gene2733;Dbxref=Genbank:WP_002210323.1;Name=WP_002210323.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002210323.1;transl_table=11 NC_014029.1 RefSeq gene 2979792 2980875 . - . ID=gene2734;Name=YPZ3_RS13700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13700;old_locus_tag=YPZ3_2296;pseudo=true NC_014029.1 Protein Homology CDS 2979792 2980875 . - 0 ID=cds2695;Parent=gene2734;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 2980885 2981997 . - . ID=gene2735;Name=YPZ3_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13705;old_locus_tag=YPZ3_2297 NC_014029.1 Protein Homology CDS 2980885 2981997 . - 0 ID=cds2696;Parent=gene2735;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11 NC_014029.1 RefSeq gene 2982182 2984077 . - . ID=gene2736;Name=YPZ3_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13710;old_locus_tag=YPZ3_2298 NC_014029.1 Protein Homology CDS 2982182 2984077 . - 0 ID=cds2697;Parent=gene2736;Dbxref=Genbank:WP_002210326.1;Name=WP_002210326.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_002210326.1;transl_table=11 NC_014029.1 RefSeq gene 2984159 2984629 . - . ID=gene2737;Name=YPZ3_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13715;old_locus_tag=YPZ3_2299 NC_014029.1 Protein Homology CDS 2984159 2984629 . - 0 ID=cds2698;Parent=gene2737;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11 NC_014029.1 RefSeq gene 2984633 2984950 . - . ID=gene2738;Name=YPZ3_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13720;old_locus_tag=YPZ3_2300 NC_014029.1 Protein Homology CDS 2984633 2984950 . - 0 ID=cds2699;Parent=gene2738;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11 NC_014029.1 RefSeq gene 2985174 2985836 . - . ID=gene2739;Name=YPZ3_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13725;old_locus_tag=YPZ3_2301 NC_014029.1 Protein Homology CDS 2985174 2985836 . - 0 ID=cds2700;Parent=gene2739;Dbxref=Genbank:WP_002210330.1;Name=WP_002210330.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NC_014029.1 RefSeq gene 2985826 2986860 . - . ID=gene2740;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YPZ3_RS13730;old_locus_tag=YPZ3_2302 NC_014029.1 Protein Homology CDS 2985826 2986860 . - 0 ID=cds2701;Parent=gene2740;Dbxref=Genbank:WP_002210331.1;Name=WP_002210331.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_002210331.1;transl_table=11 NC_014029.1 RefSeq gene 2986857 2987480 . - . ID=gene2741;Name=YPZ3_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13735;old_locus_tag=YPZ3_2303 NC_014029.1 Protein Homology CDS 2986857 2987480 . - 0 ID=cds2702;Parent=gene2741;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11 NC_014029.1 RefSeq gene 2987495 2990077 . - . ID=gene2742;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YPZ3_RS13740;old_locus_tag=YPZ3_2304 NC_014029.1 Protein Homology CDS 2987495 2990077 . - 0 ID=cds2703;Parent=gene2742;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NC_014029.1 RefSeq gene 2990338 2990820 . + . ID=gene2743;Name=YPZ3_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13745;old_locus_tag=YPZ3_2305 NC_014029.1 Protein Homology CDS 2990338 2990820 . + 0 ID=cds2704;Parent=gene2743;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11 NC_014029.1 RefSeq gene 2990954 2991679 . - . ID=gene2744;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YPZ3_RS13750;old_locus_tag=YPZ3_2306 NC_014029.1 Protein Homology CDS 2990954 2991679 . - 0 ID=cds2705;Parent=gene2744;Dbxref=Genbank:WP_002210336.1;Name=WP_002210336.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NC_014029.1 RefSeq gene 2991679 2992353 . - . ID=gene2745;Name=YPZ3_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13755;old_locus_tag=YPZ3_2307 NC_014029.1 Protein Homology CDS 2991679 2992353 . - 0 ID=cds2706;Parent=gene2745;Dbxref=Genbank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;product=glutamate/aspartate transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NC_014029.1 RefSeq gene 2992353 2993093 . - . ID=gene2746;Name=YPZ3_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13760;old_locus_tag=YPZ3_2308 NC_014029.1 Protein Homology CDS 2992353 2993093 . - 0 ID=cds2707;Parent=gene2746;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11 NC_014029.1 RefSeq gene 2993267 2994184 . - . ID=gene2747;Name=YPZ3_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13765;old_locus_tag=YPZ3_2309 NC_014029.1 Protein Homology CDS 2993267 2994184 . - 0 ID=cds2708;Parent=gene2747;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11 NC_014029.1 RefSeq gene 2994949 2996496 . - . ID=gene2748;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YPZ3_RS13770;old_locus_tag=YPZ3_2310 NC_014029.1 Protein Homology CDS 2994949 2996496 . - 0 ID=cds2709;Parent=gene2748;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NC_014029.1 RefSeq gene 2996504 2997382 . - . ID=gene2749;Name=YPZ3_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13775;old_locus_tag=YPZ3_2311 NC_014029.1 Protein Homology CDS 2996504 2997382 . - 0 ID=cds2710;Parent=gene2749;Dbxref=Genbank:WP_002210342.1;Name=WP_002210342.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_002210342.1;transl_table=11 NC_014029.1 RefSeq gene 2997500 2997973 . - . ID=gene2750;Name=YPZ3_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13780;old_locus_tag=YPZ3_2312 NC_014029.1 Protein Homology CDS 2997500 2997973 . - 0 ID=cds2711;Parent=gene2750;Dbxref=Genbank:WP_002210344.1;Name=WP_002210344.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_002210344.1;transl_table=11 NC_014029.1 RefSeq gene 2997970 2999025 . - . ID=gene2751;Name=YPZ3_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13785;old_locus_tag=YPZ3_2313 NC_014029.1 Protein Homology CDS 2997970 2999025 . - 0 ID=cds2712;Parent=gene2751;Dbxref=Genbank:WP_002354474.1;Name=WP_002354474.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_002354474.1;transl_table=11 NC_014029.1 RefSeq gene 2999370 3000794 . - . ID=gene2752;Name=YPZ3_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13790;old_locus_tag=YPZ3_2314 NC_014029.1 Protein Homology CDS 2999370 3000794 . - 0 ID=cds2713;Parent=gene2752;Dbxref=Genbank:WP_002227875.1;Name=WP_002227875.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_002227875.1;transl_table=11 NC_014029.1 RefSeq gene 3001036 3002217 . + . ID=gene2753;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=YPZ3_RS13795;old_locus_tag=YPZ3_2315 NC_014029.1 Protein Homology CDS 3001036 3002217 . + 0 ID=cds2714;Parent=gene2753;Dbxref=Genbank:WP_002210347.1;Name=WP_002210347.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_002210347.1;transl_table=11 NC_014029.1 RefSeq gene 3002611 3002685 . - . ID=gene2754;Name=YPZ3_RS13800;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS13800;old_locus_tag=YPZ3_t31 NC_014029.1 tRNAscan-SE tRNA 3002611 3002685 . - . ID=rna36;Parent=gene2754;anticodon=(pos:complement(3002651..3002653));gbkey=tRNA;product=tRNA-Gln NC_014029.1 tRNAscan-SE exon 3002611 3002685 . - . ID=id211;Parent=rna36;anticodon=(pos:complement(3002651..3002653));gbkey=tRNA;product=tRNA-Gln NC_014029.1 RefSeq gene 3002691 3002767 . - . ID=gene2755;Name=YPZ3_RS13805;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS13805;old_locus_tag=YPZ3_t32 NC_014029.1 tRNAscan-SE tRNA 3002691 3002767 . - . ID=rna37;Parent=gene2755;anticodon=(pos:complement(3002731..3002733));gbkey=tRNA;product=tRNA-Met NC_014029.1 tRNAscan-SE exon 3002691 3002767 . - . ID=id212;Parent=rna37;anticodon=(pos:complement(3002731..3002733));gbkey=tRNA;product=tRNA-Met NC_014029.1 RefSeq gene 3002800 3002874 . - . ID=gene2756;Name=YPZ3_RS13810;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS13810;old_locus_tag=YPZ3_t33 NC_014029.1 tRNAscan-SE tRNA 3002800 3002874 . - . ID=rna38;Parent=gene2756;anticodon=(pos:complement(3002840..3002842));gbkey=tRNA;product=tRNA-Gln NC_014029.1 tRNAscan-SE exon 3002800 3002874 . - . ID=id213;Parent=rna38;anticodon=(pos:complement(3002840..3002842));gbkey=tRNA;product=tRNA-Gln NC_014029.1 RefSeq gene 3002904 3002988 . - . ID=gene2757;Name=YPZ3_RS13815;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS13815;old_locus_tag=YPZ3_t34 NC_014029.1 tRNAscan-SE tRNA 3002904 3002988 . - . ID=rna39;Parent=gene2757;anticodon=(pos:complement(3002952..3002954));gbkey=tRNA;product=tRNA-Leu NC_014029.1 tRNAscan-SE exon 3002904 3002988 . - . ID=id214;Parent=rna39;anticodon=(pos:complement(3002952..3002954));gbkey=tRNA;product=tRNA-Leu NC_014029.1 RefSeq gene 3002996 3003072 . - . ID=gene2758;Name=YPZ3_RS13820;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS13820;old_locus_tag=YPZ3_t35 NC_014029.1 tRNAscan-SE tRNA 3002996 3003072 . - . ID=rna40;Parent=gene2758;anticodon=(pos:complement(3003036..3003038));gbkey=tRNA;product=tRNA-Met NC_014029.1 tRNAscan-SE exon 3002996 3003072 . - . ID=id215;Parent=rna40;anticodon=(pos:complement(3003036..3003038));gbkey=tRNA;product=tRNA-Met NC_014029.1 RefSeq gene 3003344 3003481 . + . ID=gene2759;Name=YPZ3_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13825 NC_014029.1 Protein Homology CDS 3003344 3003481 . + 0 ID=cds2715;Parent=gene2759;Dbxref=Genbank:WP_002222587.1;Name=WP_002222587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222587.1;transl_table=11 NC_014029.1 RefSeq gene 3003530 3005194 . - . ID=gene2760;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YPZ3_RS13830;old_locus_tag=YPZ3_2316 NC_014029.1 Protein Homology CDS 3003530 3005194 . - 0 ID=cds2716;Parent=gene2760;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11 NC_014029.1 RefSeq gene 3005549 3006301 . - . ID=gene2761;Name=YPZ3_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13835;old_locus_tag=YPZ3_2317 NC_014029.1 Protein Homology CDS 3005549 3006301 . - 0 ID=cds2717;Parent=gene2761;Dbxref=Genbank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_002210349.1;transl_table=11 NC_014029.1 RefSeq gene 3006374 3007600 . - . ID=gene2762;Name=YPZ3_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13840;old_locus_tag=YPZ3_2318 NC_014029.1 Protein Homology CDS 3006374 3007600 . - 0 ID=cds2718;Parent=gene2762;Dbxref=Genbank:WP_002224863.1;Name=WP_002224863.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002224863.1;transl_table=11 NC_014029.1 RefSeq gene 3007617 3008762 . - . ID=gene2763;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPZ3_RS13845;old_locus_tag=YPZ3_2319 NC_014029.1 Protein Homology CDS 3007617 3008762 . - 0 ID=cds2719;Parent=gene2763;Dbxref=Genbank:WP_002210351.1;Name=WP_002210351.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11 NC_014029.1 RefSeq gene 3008782 3009582 . - . ID=gene2764;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YPZ3_RS13850;old_locus_tag=YPZ3_2320 NC_014029.1 Protein Homology CDS 3008782 3009582 . - 0 ID=cds2720;Parent=gene2764;Dbxref=Genbank:WP_002210352.1;Name=WP_002210352.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_002210352.1;transl_table=11 NC_014029.1 RefSeq gene 3009982 3012016 . + . ID=gene2765;Name=YPZ3_RS13855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13855;old_locus_tag=YPZ3_2321;pseudo=true NC_014029.1 Protein Homology CDS 3009982 3012016 . + 0 ID=cds2721;Parent=gene2765;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS N-acetyl glucosamine transporter subunit IIABC;pseudo=true;transl_table=11 NC_014029.1 RefSeq repeat_region 3012128 3012851 . + . ID=id216;gbkey=repeat_region NC_014029.1 RefSeq gene 3012281 3012739 . + . ID=gene2766;Name=YPZ3_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13860;old_locus_tag=YPZ3_2322 NC_014029.1 Protein Homology CDS 3012281 3012739 . + 0 ID=cds2722;Parent=gene2766;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3012941 3014608 . + . ID=gene2767;Name=YPZ3_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13865;old_locus_tag=YPZ3_2323 NC_014029.1 Protein Homology CDS 3012941 3014608 . + 0 ID=cds2723;Parent=gene2767;Dbxref=Genbank:WP_002210354.1;Name=WP_002210354.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NC_014029.1 RefSeq gene 3015314 3016735 . + . ID=gene2768;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YPZ3_RS13870;old_locus_tag=YPZ3_2324 NC_014029.1 Protein Homology CDS 3015314 3016735 . + 0 ID=cds2724;Parent=gene2768;Dbxref=Genbank:WP_002210355.1;Name=WP_002210355.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=porin;protein_id=WP_002210355.1;transl_table=11 NC_014029.1 RefSeq gene 3017063 3019727 . + . ID=gene2769;Name=YPZ3_RS13875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13875;pseudo=true NC_014029.1 Protein Homology CDS 3017063 3019727 . + 0 ID=cds2725;Parent=gene2769;exception=annotated by transcript or proteomic data;gbkey=CDS;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3020168 3020614 . - . ID=gene2770;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YPZ3_RS13880;old_locus_tag=YPZ3_2327 NC_014029.1 Protein Homology CDS 3020168 3020614 . - 0 ID=cds2726;Parent=gene2770;Dbxref=Genbank:WP_002210357.1;Name=WP_002210357.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulation protein;protein_id=WP_002210357.1;transl_table=11 NC_014029.1 RefSeq gene 3020981 3021508 . - . ID=gene2771;Name=YPZ3_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13885;old_locus_tag=YPZ3_2328 NC_014029.1 Protein Homology CDS 3020981 3021508 . - 0 ID=cds2727;Parent=gene2771;Dbxref=Genbank:WP_002215386.1;Name=WP_002215386.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002215386.1;transl_table=11 NC_014029.1 RefSeq gene 3021925 3022212 . - . ID=gene2772;Name=YPZ3_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13890 NC_014029.1 Protein Homology CDS 3021925 3022212 . - 0 ID=cds2728;Parent=gene2772;Dbxref=Genbank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NC_014029.1 RefSeq gene 3022267 3022392 . + . ID=gene2773;Name=YPZ3_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13895 NC_014029.1 Protein Homology CDS 3022267 3022392 . + 0 ID=cds2729;Parent=gene2773;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11 NC_014029.1 RefSeq gene 3022544 3023311 . - . ID=gene2774;Name=YPZ3_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13900;old_locus_tag=YPZ3_2329 NC_014029.1 Protein Homology CDS 3022544 3023311 . - 0 ID=cds2730;Parent=gene2774;Dbxref=Genbank:WP_002215390.1;Name=WP_002215390.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002215390.1;transl_table=11 NC_014029.1 RefSeq gene 3024022 3024273 . + . ID=gene2775;Name=YPZ3_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13905 NC_014029.1 Protein Homology CDS 3024022 3024273 . + 0 ID=cds2731;Parent=gene2775;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NC_014029.1 RefSeq gene 3024436 3024621 . - . ID=gene2776;Name=YPZ3_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13910 NC_014029.1 Protein Homology CDS 3024436 3024621 . - 0 ID=cds2732;Parent=gene2776;Dbxref=Genbank:WP_002215393.1;Name=WP_002215393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215393.1;transl_table=11 NC_014029.1 RefSeq gene 3024704 3024967 . - . ID=gene2777;Name=YPZ3_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13915 NC_014029.1 Protein Homology CDS 3024704 3024967 . - 0 ID=cds2733;Parent=gene2777;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11 NC_014029.1 RefSeq gene 3025037 3025501 . - . ID=gene2778;Name=YPZ3_RS13920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13920;old_locus_tag=YPZ3_2330;partial=true;pseudo=true;start_range=.,3025037 NC_014029.1 Protein Homology CDS 3025037 3025501 . - 0 ID=cds2734;Parent=gene2778;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3025037;transl_table=11 NC_014029.1 RefSeq repeat_region 3025446 3027402 . + . ID=id217;gbkey=repeat_region NC_014029.1 RefSeq gene 3025514 3026293 . - . ID=gene2779;Name=YPZ3_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13925;old_locus_tag=YPZ3_2331 NC_014029.1 Protein Homology CDS 3025514 3026293 . - 0 ID=cds2735;Parent=gene2779;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 3026293 3027315 . - . ID=gene2780;Name=YPZ3_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13930;old_locus_tag=YPZ3_2332 NC_014029.1 Protein Homology CDS 3026293 3027315 . - 0 ID=cds2736;Parent=gene2780;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 3027402 3028139 . + . ID=gene2781;Name=YPZ3_RS13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS13935;old_locus_tag=YPZ3_2333;partial=true;pseudo=true;start_range=.,3027402 NC_014029.1 Protein Homology CDS 3027402 3028139 . + 0 ID=cds2737;Parent=gene2781;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=allantoinase;pseudo=true;start_range=.,3027402;transl_table=11 NC_014029.1 RefSeq repeat_region 3028168 3028338 . + . ID=id218;gbkey=repeat_region NC_014029.1 RefSeq gene 3028369 3029373 . - . ID=gene2782;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YPZ3_RS13940;old_locus_tag=YPZ3_2334 NC_014029.1 Protein Homology CDS 3028369 3029373 . - 0 ID=cds2738;Parent=gene2782;Dbxref=Genbank:WP_002215933.1;Name=WP_002215933.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002215933.1;transl_table=11 NC_014029.1 RefSeq gene 3029421 3030587 . - . ID=gene2783;Name=YPZ3_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13945;old_locus_tag=YPZ3_2335 NC_014029.1 Protein Homology CDS 3029421 3030587 . - 0 ID=cds2739;Parent=gene2783;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11 NC_014029.1 RefSeq gene 3030580 3031779 . - . ID=gene2784;Name=YPZ3_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13950;old_locus_tag=YPZ3_2336 NC_014029.1 Protein Homology CDS 3030580 3031779 . - 0 ID=cds2740;Parent=gene2784;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11 NC_014029.1 RefSeq gene 3032455 3033426 . - . ID=gene2785;Name=YPZ3_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13955;old_locus_tag=YPZ3_2337 NC_014029.1 Protein Homology CDS 3032455 3033426 . - 0 ID=cds2741;Parent=gene2785;Dbxref=Genbank:WP_002212211.1;Name=WP_002212211.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NC_014029.1 RefSeq gene 3033533 3035683 . - . ID=gene2786;Name=YPZ3_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13960;old_locus_tag=YPZ3_2338 NC_014029.1 Protein Homology CDS 3033533 3035683 . - 0 ID=cds2742;Parent=gene2786;Dbxref=Genbank:WP_002212212.1;Name=WP_002212212.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002212212.1;transl_table=11 NC_014029.1 RefSeq gene 3035665 3036069 . - . ID=gene2787;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YPZ3_RS13965;old_locus_tag=YPZ3_2339 NC_014029.1 Protein Homology CDS 3035665 3036069 . - 0 ID=cds2743;Parent=gene2787;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11 NC_014029.1 RefSeq gene 3036083 3036319 . - . ID=gene2788;Name=YPZ3_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13970 NC_014029.1 Protein Homology CDS 3036083 3036319 . - 0 ID=cds2744;Parent=gene2788;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11 NC_014029.1 RefSeq gene 3036840 3037205 . + . ID=gene2789;Name=YPZ3_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13975;old_locus_tag=YPZ3_2340 NC_014029.1 Protein Homology CDS 3036840 3037205 . + 0 ID=cds2745;Parent=gene2789;Dbxref=Genbank:WP_002212215.1;Name=WP_002212215.1;gbkey=CDS;product=acid shock protein;protein_id=WP_002212215.1;transl_table=11 NC_014029.1 RefSeq gene 3037683 3038018 . + . ID=gene2790;Name=YPZ3_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13980;old_locus_tag=YPZ3_2341 NC_014029.1 Protein Homology CDS 3037683 3038018 . + 0 ID=cds2746;Parent=gene2790;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11 NC_014029.1 RefSeq gene 3038116 3038565 . - . ID=gene2791;Name=YPZ3_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13985;old_locus_tag=YPZ3_2342 NC_014029.1 Protein Homology CDS 3038116 3038565 . - 0 ID=cds2747;Parent=gene2791;Dbxref=Genbank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212217.1;transl_table=11 NC_014029.1 RefSeq gene 3038730 3039068 . - . ID=gene2792;Name=YPZ3_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13990;old_locus_tag=YPZ3_2343 NC_014029.1 Protein Homology CDS 3038730 3039068 . - 0 ID=cds2748;Parent=gene2792;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11 NC_014029.1 cmsearch region 3039398 3039859 . + . ID=id219;Note=cspA;gbkey=misc_feature NC_014029.1 RefSeq gene 3039576 3039788 . + . ID=gene2793;Name=YPZ3_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS13995 NC_014029.1 Protein Homology CDS 3039576 3039788 . + 0 ID=cds2749;Parent=gene2793;Dbxref=Genbank:WP_002212220.1;Name=WP_002212220.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_002212220.1;transl_table=11 NC_014029.1 RefSeq gene 3040616 3042193 . + . ID=gene2794;Name=YPZ3_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14000;old_locus_tag=YPZ3_2344 NC_014029.1 Protein Homology CDS 3040616 3042193 . + 0 ID=cds2750;Parent=gene2794;Dbxref=Genbank:WP_002215276.1;Name=WP_002215276.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002215276.1;transl_table=11 NC_014029.1 RefSeq gene 3042178 3043161 . + . ID=gene2795;Name=YPZ3_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14005;old_locus_tag=YPZ3_2345 NC_014029.1 Protein Homology CDS 3042178 3043161 . + 0 ID=cds2751;Parent=gene2795;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11 NC_014029.1 RefSeq gene 3043158 3043964 . + . ID=gene2796;Name=YPZ3_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14010;old_locus_tag=YPZ3_2346 NC_014029.1 Protein Homology CDS 3043158 3043964 . + 0 ID=cds2752;Parent=gene2796;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NC_014029.1 RefSeq gene 3043964 3044770 . + . ID=gene2797;Name=YPZ3_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14015;old_locus_tag=YPZ3_2347 NC_014029.1 Protein Homology CDS 3043964 3044770 . + 0 ID=cds2753;Parent=gene2797;Dbxref=Genbank:WP_002212225.1;Name=WP_002212225.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002212225.1;transl_table=11 NC_014029.1 RefSeq gene 3044763 3045428 . + . ID=gene2798;Name=YPZ3_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14020;old_locus_tag=YPZ3_2348 NC_014029.1 Protein Homology CDS 3044763 3045428 . + 0 ID=cds2754;Parent=gene2798;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11 NC_014029.1 RefSeq gene 3046627 3046929 . + . ID=gene2799;Name=YPZ3_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14025;old_locus_tag=YPZ3_2349 NC_014029.1 Protein Homology CDS 3046627 3046929 . + 0 ID=cds2755;Parent=gene2799;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NC_014029.1 RefSeq gene 3046982 3047416 . + . ID=gene2800;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YPZ3_RS14030;old_locus_tag=YPZ3_2350 NC_014029.1 Protein Homology CDS 3046982 3047416 . + 0 ID=cds2756;Parent=gene2800;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NC_014029.1 RefSeq gene 3047506 3049224 . + . ID=gene2801;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=YPZ3_RS14035;old_locus_tag=YPZ3_2351 NC_014029.1 Protein Homology CDS 3047506 3049224 . + 0 ID=cds2757;Parent=gene2801;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NC_014029.1 RefSeq gene 3049520 3050215 . + . ID=gene2802;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YPZ3_RS14040;old_locus_tag=YPZ3_2352 NC_014029.1 Protein Homology CDS 3049520 3050215 . + 0 ID=cds2758;Parent=gene2802;Dbxref=Genbank:WP_002212230.1;Name=WP_002212230.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_002212230.1;transl_table=11 NC_014029.1 RefSeq gene 3050237 3050923 . + . ID=gene2803;Name=YPZ3_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14045;old_locus_tag=YPZ3_2353 NC_014029.1 Protein Homology CDS 3050237 3050923 . + 0 ID=cds2759;Parent=gene2803;Dbxref=Genbank:WP_002212231.1;Name=WP_002212231.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_002212231.1;transl_table=11 NC_014029.1 RefSeq gene 3051050 3051712 . + . ID=gene2804;Name=YPZ3_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14050;old_locus_tag=YPZ3_2354 NC_014029.1 Protein Homology CDS 3051050 3051712 . + 0 ID=cds2760;Parent=gene2804;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NC_014029.1 RefSeq gene 3051709 3052542 . + . ID=gene2805;Name=YPZ3_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14055;old_locus_tag=YPZ3_2355 NC_014029.1 Protein Homology CDS 3051709 3052542 . + 0 ID=cds2761;Parent=gene2805;Dbxref=Genbank:WP_002228375.1;Name=WP_002228375.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_002228375.1;transl_table=11 NC_014029.1 RefSeq gene 3052867 3053859 . + . ID=gene2806;Name=YPZ3_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14060;old_locus_tag=YPZ3_2356 NC_014029.1 Protein Homology CDS 3052867 3053859 . + 0 ID=cds2762;Parent=gene2806;Dbxref=Genbank:WP_002212233.1;Name=WP_002212233.1;gbkey=CDS;product=urea transporter;protein_id=WP_002212233.1;transl_table=11 NC_014029.1 RefSeq gene 3054008 3055066 . + . ID=gene2807;Name=YPZ3_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14065;old_locus_tag=YPZ3_2357 NC_014029.1 Protein Homology CDS 3054008 3055066 . + 0 ID=cds2763;Parent=gene2807;Dbxref=Genbank:WP_002212234.1;Name=WP_002212234.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002212234.1;transl_table=11 NC_014029.1 RefSeq gene 3055235 3055564 . - . ID=gene2808;Name=YPZ3_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14070;old_locus_tag=YPZ3_2358 NC_014029.1 Protein Homology CDS 3055235 3055564 . - 0 ID=cds2764;Parent=gene2808;Dbxref=Genbank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_002212235.1;transl_table=11 NC_014029.1 RefSeq gene 3055563 3055793 . + . ID=gene2809;Name=YPZ3_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14075 NC_014029.1 Protein Homology CDS 3055563 3055793 . + 0 ID=cds2765;Parent=gene2809;Dbxref=Genbank:WP_002215289.1;Name=WP_002215289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215289.1;transl_table=11 NC_014029.1 RefSeq gene 3056182 3057357 . + . ID=gene2810;Name=YPZ3_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14080;old_locus_tag=YPZ3_2359 NC_014029.1 Protein Homology CDS 3056182 3057357 . + 0 ID=cds2766;Parent=gene2810;Dbxref=Genbank:WP_002212236.1;Name=WP_002212236.1;gbkey=CDS;product=voltage-gated potassium channel;protein_id=WP_002212236.1;transl_table=11 NC_014029.1 RefSeq gene 3057455 3057859 . - . ID=gene2811;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=YPZ3_RS14085;old_locus_tag=YPZ3_2360 NC_014029.1 Protein Homology CDS 3057455 3057859 . - 0 ID=cds2767;Parent=gene2811;Dbxref=Genbank:WP_002212237.1;Name=WP_002212237.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_002212237.1;transl_table=11 NC_014029.1 RefSeq gene 3057875 3058255 . - . ID=gene2812;Name=YPZ3_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14090;old_locus_tag=YPZ3_2361 NC_014029.1 Protein Homology CDS 3057875 3058255 . - 0 ID=cds2768;Parent=gene2812;Dbxref=Genbank:WP_002212238.1;Name=WP_002212238.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_002212238.1;transl_table=11 NC_014029.1 RefSeq gene 3058344 3058523 . - . ID=gene2813;Name=YPZ3_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14095 NC_014029.1 Protein Homology CDS 3058344 3058523 . - 0 ID=cds2769;Parent=gene2813;Dbxref=Genbank:WP_002212239.1;Name=WP_002212239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212239.1;transl_table=11 NC_014029.1 RefSeq gene 3059296 3059613 . + . ID=gene2814;Name=YPZ3_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14100;old_locus_tag=YPZ3_2362 NC_014029.1 Protein Homology CDS 3059296 3059613 . + 0 ID=cds2770;Parent=gene2814;Dbxref=Genbank:WP_002212240.1;Name=WP_002212240.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_002212240.1;transl_table=11 NC_014029.1 RefSeq gene 3059624 3060985 . + . ID=gene2815;Name=YPZ3_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14105;old_locus_tag=YPZ3_2363 NC_014029.1 Protein Homology CDS 3059624 3060985 . + 0 ID=cds2771;Parent=gene2815;Dbxref=Genbank:WP_002212241.1;Name=WP_002212241.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NC_014029.1 RefSeq gene 3061152 3061499 . + . ID=gene2816;Name=YPZ3_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14110;old_locus_tag=YPZ3_2364 NC_014029.1 Protein Homology CDS 3061152 3061499 . + 0 ID=cds2772;Parent=gene2816;Dbxref=Genbank:WP_002212242.1;Name=WP_002212242.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIA;protein_id=WP_002212242.1;transl_table=11 NC_014029.1 RefSeq gene 3061548 3062378 . + . ID=gene2817;Name=YPZ3_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14115;old_locus_tag=YPZ3_2365 NC_014029.1 Protein Homology CDS 3061548 3062378 . + 0 ID=cds2773;Parent=gene2817;Dbxref=Genbank:WP_002212243.1;Name=WP_002212243.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212243.1;transl_table=11 NC_014029.1 RefSeq gene 3062430 3063191 . + . ID=gene2818;Name=YPZ3_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14120;old_locus_tag=YPZ3_2366 NC_014029.1 Protein Homology CDS 3062430 3063191 . + 0 ID=cds2774;Parent=gene2818;Dbxref=Genbank:WP_002212244.1;Name=WP_002212244.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11 NC_014029.1 RefSeq gene 3063198 3063374 . - . ID=gene2819;Name=YPZ3_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14125 NC_014029.1 Protein Homology CDS 3063198 3063374 . - 0 ID=cds2775;Parent=gene2819;Dbxref=Genbank:WP_002212245.1;Name=WP_002212245.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212245.1;transl_table=11 NC_014029.1 RefSeq gene 3063486 3063854 . - . ID=gene2820;Name=YPZ3_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14130 NC_014029.1 Protein Homology CDS 3063486 3063854 . - 0 ID=cds2776;Parent=gene2820;Dbxref=Genbank:WP_002212246.1;Name=WP_002212246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212246.1;transl_table=11 NC_014029.1 RefSeq gene 3064349 3064876 . + . ID=gene2821;Name=YPZ3_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14135;old_locus_tag=YPZ3_2367 NC_014029.1 Protein Homology CDS 3064349 3064876 . + 0 ID=cds2777;Parent=gene2821;Dbxref=Genbank:WP_002212248.1;Name=WP_002212248.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_002212248.1;transl_table=11 NC_014029.1 RefSeq gene 3064949 3066592 . + . ID=gene2822;Name=YPZ3_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14140;old_locus_tag=YPZ3_2368 NC_014029.1 Protein Homology CDS 3064949 3066592 . + 0 ID=cds2778;Parent=gene2822;Dbxref=Genbank:WP_002216360.1;Name=WP_002216360.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_002216360.1;transl_table=11 NC_014029.1 RefSeq gene 3066810 3066923 . + . ID=gene2823;Name=YPZ3_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14145 NC_014029.1 Protein Homology CDS 3066810 3066923 . + 0 ID=cds2779;Parent=gene2823;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11 NC_014029.1 RefSeq gene 3066966 3067208 . + . ID=gene2824;Name=YPZ3_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14150 NC_014029.1 Protein Homology CDS 3066966 3067208 . + 0 ID=cds2780;Parent=gene2824;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NC_014029.1 RefSeq gene 3067336 3067764 . - . ID=gene2825;Name=YPZ3_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14155;old_locus_tag=YPZ3_2369 NC_014029.1 Protein Homology CDS 3067336 3067764 . - 0 ID=cds2781;Parent=gene2825;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11 NC_014029.1 RefSeq gene 3067859 3068545 . - . ID=gene2826;Name=YPZ3_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14160;old_locus_tag=YPZ3_2370 NC_014029.1 Protein Homology CDS 3067859 3068545 . - 0 ID=cds2782;Parent=gene2826;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11 NC_014029.1 RefSeq gene 3068781 3071507 . - . ID=gene2827;Name=YPZ3_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14165;old_locus_tag=YPZ3_2371 NC_014029.1 Protein Homology CDS 3068781 3071507 . - 0 ID=cds2783;Parent=gene2827;Dbxref=Genbank:WP_002209649.1;Name=WP_002209649.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_002209649.1;transl_table=11 NC_014029.1 RefSeq gene 3071517 3072167 . - . ID=gene2828;Name=YPZ3_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14170;old_locus_tag=YPZ3_2372 NC_014029.1 Protein Homology CDS 3071517 3072167 . - 0 ID=cds2784;Parent=gene2828;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11 NC_014029.1 RefSeq gene 3072331 3074397 . - . ID=gene2829;Name=YPZ3_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14175;old_locus_tag=YPZ3_2373 NC_014029.1 Protein Homology CDS 3072331 3074397 . - 0 ID=cds2785;Parent=gene2829;Dbxref=Genbank:WP_002209651.1;Name=WP_002209651.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_002209651.1;transl_table=11 NC_014029.1 RefSeq gene 3074491 3076179 . - . ID=gene2830;Name=YPZ3_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14180;old_locus_tag=YPZ3_2374 NC_014029.1 Protein Homology CDS 3074491 3076179 . - 0 ID=cds2786;Parent=gene2830;Dbxref=Genbank:WP_002209652.1;Name=WP_002209652.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_002209652.1;transl_table=11 NC_014029.1 RefSeq gene 3076180 3076269 . - . ID=gene2831;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=YPZ3_RS14185 NC_014029.1 Protein Homology CDS 3076180 3076269 . - 0 ID=cds2787;Parent=gene2831;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11 NC_014029.1 RefSeq gene 3076266 3076508 . - . ID=gene2832;Name=YPZ3_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14190 NC_014029.1 Protein Homology CDS 3076266 3076508 . - 0 ID=cds2788;Parent=gene2832;Dbxref=Genbank:WP_002216017.1;Name=WP_002216017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216017.1;transl_table=11 NC_014029.1 RefSeq gene 3076674 3076880 . + . ID=gene2833;Name=YPZ3_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14195 NC_014029.1 Protein Homology CDS 3076674 3076880 . + 0 ID=cds2789;Parent=gene2833;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11 NC_014029.1 RefSeq gene 3077219 3077701 . + . ID=gene2834;Name=YPZ3_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14200;old_locus_tag=YPZ3_2375 NC_014029.1 Protein Homology CDS 3077219 3077701 . + 0 ID=cds2790;Parent=gene2834;Dbxref=Genbank:WP_002209654.1;Name=WP_002209654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209654.1;transl_table=11 NC_014029.1 RefSeq gene 3077831 3079294 . + . ID=gene2835;Name=YPZ3_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14205;old_locus_tag=YPZ3_2376 NC_014029.1 Protein Homology CDS 3077831 3079294 . + 0 ID=cds2791;Parent=gene2835;Dbxref=Genbank:WP_002209655.1;Name=WP_002209655.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_002209655.1;transl_table=11 NC_014029.1 RefSeq gene 3079285 3080322 . + . ID=gene2836;Name=YPZ3_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14210;old_locus_tag=YPZ3_2377 NC_014029.1 Protein Homology CDS 3079285 3080322 . + 0 ID=cds2792;Parent=gene2836;Dbxref=Genbank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002209656.1;transl_table=11 NC_014029.1 RefSeq gene 3080465 3081208 . + . ID=gene2837;Name=YPZ3_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14215;old_locus_tag=YPZ3_2378 NC_014029.1 Protein Homology CDS 3080465 3081208 . + 0 ID=cds2793;Parent=gene2837;Dbxref=Genbank:WP_002354507.1;Name=WP_002354507.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_002354507.1;transl_table=11 NC_014029.1 RefSeq gene 3081827 3082483 . + . ID=gene2838;Name=YPZ3_RS14220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS14220;pseudo=true NC_014029.1 Protein Homology CDS 3081827 3082483 . + 0 ID=cds2794;Parent=gene2838;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3082370..3082372%2Caa:Other);transl_table=11 NC_014029.1 RefSeq gene 3082477 3083265 . + . ID=gene2839;Name=YPZ3_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14225;old_locus_tag=YPZ3_2380 NC_014029.1 Protein Homology CDS 3082477 3083265 . + 0 ID=cds2795;Parent=gene2839;Dbxref=Genbank:WP_013060335.1;Name=WP_013060335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_013060335.1;transl_table=11 NC_014029.1 RefSeq gene 3083425 3084162 . + . ID=gene2840;Name=YPZ3_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14230;old_locus_tag=YPZ3_2381 NC_014029.1 Protein Homology CDS 3083425 3084162 . + 0 ID=cds2796;Parent=gene2840;Dbxref=Genbank:WP_002209659.1;Name=WP_002209659.1;gbkey=CDS;product=LamB/YcsF family protein;protein_id=WP_002209659.1;transl_table=11 NC_014029.1 RefSeq gene 3084247 3084978 . + . ID=gene2841;Name=YPZ3_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14235;old_locus_tag=YPZ3_2382 NC_014029.1 Protein Homology CDS 3084247 3084978 . + 0 ID=cds2797;Parent=gene2841;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11 NC_014029.1 RefSeq gene 3084975 3085994 . + . ID=gene2842;Name=YPZ3_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14240;old_locus_tag=YPZ3_2383 NC_014029.1 Protein Homology CDS 3084975 3085994 . + 0 ID=cds2798;Parent=gene2842;Dbxref=Genbank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209661.1;transl_table=11 NC_014029.1 RefSeq gene 3086004 3086651 . + . ID=gene2843;Name=YPZ3_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14245;old_locus_tag=YPZ3_2384 NC_014029.1 Protein Homology CDS 3086004 3086651 . + 0 ID=cds2799;Parent=gene2843;Dbxref=Genbank:WP_002209662.1;Name=WP_002209662.1;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=WP_002209662.1;transl_table=11 NC_014029.1 RefSeq gene 3086742 3087428 . - . ID=gene2844;Name=YPZ3_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14250;old_locus_tag=YPZ3_2385 NC_014029.1 Protein Homology CDS 3086742 3087428 . - 0 ID=cds2800;Parent=gene2844;Dbxref=Genbank:WP_002209663.1;Name=WP_002209663.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_002209663.1;transl_table=11 NC_014029.1 RefSeq gene 3087781 3088164 . + . ID=gene2845;Name=YPZ3_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14255;old_locus_tag=YPZ3_2386 NC_014029.1 Protein Homology CDS 3087781 3088164 . + 0 ID=cds2801;Parent=gene2845;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NC_014029.1 RefSeq gene 3088343 3089305 . + . ID=gene2846;Name=YPZ3_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14260;old_locus_tag=YPZ3_2387 NC_014029.1 Protein Homology CDS 3088343 3089305 . + 0 ID=cds2802;Parent=gene2846;Dbxref=Genbank:WP_002209665.1;Name=WP_002209665.1;gbkey=CDS;product=phospholipase A;protein_id=WP_002209665.1;transl_table=11 NC_014029.1 RefSeq gene 3089298 3089396 . + . ID=gene2847;Name=YPZ3_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14265 NC_014029.1 Protein Homology CDS 3089298 3089396 . + 0 ID=cds2803;Parent=gene2847;Dbxref=Genbank:WP_002228379.1;Name=WP_002228379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228379.1;transl_table=11 NC_014029.1 RefSeq gene 3089383 3090039 . + . ID=gene2848;Name=YPZ3_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14270;old_locus_tag=YPZ3_2388 NC_014029.1 Protein Homology CDS 3089383 3090039 . + 0 ID=cds2804;Parent=gene2848;Dbxref=Genbank:WP_002209667.1;Name=WP_002209667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209667.1;transl_table=11 NC_014029.1 RefSeq gene 3090170 3091495 . - . ID=gene2849;Name=YPZ3_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14275;old_locus_tag=YPZ3_2389 NC_014029.1 Protein Homology CDS 3090170 3091495 . - 0 ID=cds2805;Parent=gene2849;Dbxref=Genbank:WP_002209669.1;Name=WP_002209669.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002209669.1;transl_table=11 NC_014029.1 RefSeq gene 3091747 3092493 . + . ID=gene2850;Name=YPZ3_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14280;old_locus_tag=YPZ3_2390 NC_014029.1 Protein Homology CDS 3091747 3092493 . + 0 ID=cds2806;Parent=gene2850;Dbxref=Genbank:WP_002209670.1;Name=WP_002209670.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002209670.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3092561 3092737 . + . ID=id220;gbkey=repeat_region NC_014029.1 RefSeq gene 3092776 3094413 . - . ID=gene2851;Name=YPZ3_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14285;old_locus_tag=YPZ3_2391 NC_014029.1 Protein Homology CDS 3092776 3094413 . - 0 ID=cds2807;Parent=gene2851;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11 NC_014029.1 RefSeq gene 3094601 3095176 . + . ID=gene2852;Name=YPZ3_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14290;old_locus_tag=YPZ3_2392 NC_014029.1 Protein Homology CDS 3094601 3095176 . + 0 ID=cds2808;Parent=gene2852;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11 NC_014029.1 RefSeq gene 3095202 3095858 . + . ID=gene2853;Name=YPZ3_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14295;old_locus_tag=YPZ3_2393 NC_014029.1 Protein Homology CDS 3095202 3095858 . + 0 ID=cds2809;Parent=gene2853;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11 NC_014029.1 RefSeq gene 3095858 3096814 . + . ID=gene2854;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YPZ3_RS14300;old_locus_tag=YPZ3_2394 NC_014029.1 Protein Homology CDS 3095858 3096814 . + 0 ID=cds2810;Parent=gene2854;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11 NC_014029.1 RefSeq gene 3096811 3097266 . + . ID=gene2855;Name=YPZ3_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14305;old_locus_tag=YPZ3_2395 NC_014029.1 Protein Homology CDS 3096811 3097266 . + 0 ID=cds2811;Parent=gene2855;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NC_014029.1 RefSeq gene 3097287 3098141 . - . ID=gene2856;Name=YPZ3_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14310;old_locus_tag=YPZ3_2396 NC_014029.1 Protein Homology CDS 3097287 3098141 . - 0 ID=cds2812;Parent=gene2856;Dbxref=Genbank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209676.1;transl_table=11 NC_014029.1 RefSeq gene 3098641 3100440 . + . ID=gene2857;Name=YPZ3_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14315;old_locus_tag=YPZ3_2397 NC_014029.1 Protein Homology CDS 3098641 3100440 . + 0 ID=cds2813;Parent=gene2857;Dbxref=Genbank:WP_002209677.1;Name=WP_002209677.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NC_014029.1 RefSeq gene 3100450 3101448 . + . ID=gene2858;Name=YPZ3_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14320;old_locus_tag=YPZ3_2398 NC_014029.1 Protein Homology CDS 3100450 3101448 . + 0 ID=cds2814;Parent=gene2858;Dbxref=Genbank:WP_002209678.1;Name=WP_002209678.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11 NC_014029.1 RefSeq gene 3101800 3102480 . + . ID=gene2859;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YPZ3_RS14325;old_locus_tag=YPZ3_2399 NC_014029.1 Protein Homology CDS 3101800 3102480 . + 0 ID=cds2815;Parent=gene2859;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11 NC_014029.1 RefSeq gene 3102477 3103388 . + . ID=gene2860;Name=YPZ3_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14330;old_locus_tag=YPZ3_2400 NC_014029.1 Protein Homology CDS 3102477 3103388 . + 0 ID=cds2816;Parent=gene2860;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NC_014029.1 RefSeq gene 3103398 3104123 . + . ID=gene2861;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YPZ3_RS14335;old_locus_tag=YPZ3_2401 NC_014029.1 Protein Homology CDS 3103398 3104123 . + 0 ID=cds2817;Parent=gene2861;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3104160 3106118 . + . ID=id221;gbkey=repeat_region NC_014029.1 RefSeq gene 3104250 3105272 . + . ID=gene2862;Name=YPZ3_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14340;old_locus_tag=YPZ3_2402 NC_014029.1 Protein Homology CDS 3104250 3105272 . + 0 ID=cds2818;Parent=gene2862;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 3105272 3106051 . + . ID=gene2863;Name=YPZ3_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14345;old_locus_tag=YPZ3_2403 NC_014029.1 Protein Homology CDS 3105272 3106051 . + 0 ID=cds2819;Parent=gene2863;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 3106241 3106972 . + . ID=gene2864;Name=YPZ3_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14350;old_locus_tag=YPZ3_2404 NC_014029.1 Protein Homology CDS 3106241 3106972 . + 0 ID=cds2820;Parent=gene2864;Dbxref=Genbank:WP_002211569.1;Name=WP_002211569.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_002211569.1;transl_table=11 NC_014029.1 RefSeq gene 3106972 3107352 . + . ID=gene2865;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YPZ3_RS14355;old_locus_tag=YPZ3_2405 NC_014029.1 Protein Homology CDS 3106972 3107352 . + 0 ID=cds2821;Parent=gene2865;Dbxref=Genbank:WP_002211568.1;Name=WP_002211568.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_002211568.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3107405 3108122 . + . ID=id222;gbkey=repeat_region NC_014029.1 RefSeq gene 3107409 3107564 . + . ID=gene2866;Name=YPZ3_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14360 NC_014029.1 Protein Homology CDS 3107409 3107564 . + 0 ID=cds2822;Parent=gene2866;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 3107554 3108012 . + . ID=gene2867;Name=YPZ3_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14365;old_locus_tag=YPZ3_2406 NC_014029.1 Protein Homology CDS 3107554 3108012 . + 0 ID=cds2823;Parent=gene2867;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3108168 3108428 . - . ID=gene2868;Name=YPZ3_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14370 NC_014029.1 Protein Homology CDS 3108168 3108428 . - 0 ID=cds2824;Parent=gene2868;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11 NC_014029.1 RefSeq gene 3108590 3109429 . - . ID=gene2869;Name=YPZ3_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14375;old_locus_tag=YPZ3_2407 NC_014029.1 Protein Homology CDS 3108590 3109429 . - 0 ID=cds2825;Parent=gene2869;Dbxref=Genbank:WP_002211566.1;Name=WP_002211566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NC_014029.1 RefSeq gene 3109637 3110524 . + . ID=gene2870;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=YPZ3_RS14380;old_locus_tag=YPZ3_2408 NC_014029.1 Protein Homology CDS 3109637 3110524 . + 0 ID=cds2826;Parent=gene2870;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NC_014029.1 RefSeq gene 3110751 3111447 . + . ID=gene2871;Name=YPZ3_RS14385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS14385;old_locus_tag=YPZ3_2409;pseudo=true NC_014029.1 Protein Homology CDS 3110751 3111447 . + 0 ID=cds2827;Parent=gene2871;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3111518 3112120 . + . ID=gene2872;Name=YPZ3_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14390;old_locus_tag=YPZ3_2410 NC_014029.1 Protein Homology CDS 3111518 3112120 . + 0 ID=cds2828;Parent=gene2872;Dbxref=Genbank:WP_002211563.1;Name=WP_002211563.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_002211563.1;transl_table=11 NC_014029.1 RefSeq gene 3112229 3113689 . - . ID=gene2873;Name=YPZ3_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14395;old_locus_tag=YPZ3_2411 NC_014029.1 Protein Homology CDS 3112229 3113689 . - 0 ID=cds2829;Parent=gene2873;Dbxref=Genbank:WP_002211562.1;Name=WP_002211562.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002211562.1;transl_table=11 NC_014029.1 RefSeq gene 3114005 3117895 . + . ID=gene2874;Name=YPZ3_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14400;old_locus_tag=YPZ3_2412 NC_014029.1 Protein Homology CDS 3114005 3117895 . + 0 ID=cds2830;Parent=gene2874;Dbxref=Genbank:WP_002211561.1;Name=WP_002211561.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_002211561.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3117926 3118100 . + . ID=id223;gbkey=repeat_region NC_014029.1 RefSeq gene 3118307 3118756 . - . ID=gene2875;Name=YPZ3_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14405;old_locus_tag=YPZ3_2413 NC_014029.1 Protein Homology CDS 3118307 3118756 . - 0 ID=cds2831;Parent=gene2875;Dbxref=Genbank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11 NC_014029.1 RefSeq gene 3119208 3119768 . - . ID=gene2876;Name=YPZ3_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14410;old_locus_tag=YPZ3_2414 NC_014029.1 Protein Homology CDS 3119208 3119768 . - 0 ID=cds2832;Parent=gene2876;Dbxref=Genbank:WP_002211559.1;Name=WP_002211559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211559.1;transl_table=11 NC_014029.1 RefSeq gene 3120787 3121005 . + . ID=gene2877;Name=YPZ3_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14415 NC_014029.1 Protein Homology CDS 3120787 3121005 . + 0 ID=cds2833;Parent=gene2877;Dbxref=Genbank:WP_042468836.1;Name=WP_042468836.1;gbkey=CDS;product=transposase;protein_id=WP_042468836.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3120843 3121564 . + . ID=id224;gbkey=repeat_region NC_014029.1 RefSeq gene 3120995 3121453 . + . ID=gene2878;Name=YPZ3_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14420;old_locus_tag=YPZ3_2415 NC_014029.1 Protein Homology CDS 3120995 3121453 . + 0 ID=cds2834;Parent=gene2878;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 3121674 3123110 . + . ID=gene2879;Name=YPZ3_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14425;old_locus_tag=YPZ3_2416 NC_014029.1 Protein Homology CDS 3121674 3123110 . + 0 ID=cds2835;Parent=gene2879;Dbxref=Genbank:WP_002216114.1;Name=WP_002216114.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11 NC_014029.1 RefSeq gene 3123114 3124181 . + . ID=gene2880;Name=YPZ3_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14430;old_locus_tag=YPZ3_2417 NC_014029.1 Protein Homology CDS 3123114 3124181 . + 0 ID=cds2836;Parent=gene2880;Dbxref=Genbank:WP_002430124.1;Name=WP_002430124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002430124.1;transl_table=11 NC_014029.1 RefSeq gene 3124144 3125481 . + . ID=gene2881;Name=YPZ3_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14435;old_locus_tag=YPZ3_2418 NC_014029.1 Protein Homology CDS 3124144 3125481 . + 0 ID=cds2837;Parent=gene2881;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11 NC_014029.1 RefSeq gene 3125641 3127263 . + . ID=gene2882;Name=YPZ3_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14440;old_locus_tag=YPZ3_2419 NC_014029.1 Protein Homology CDS 3125641 3127263 . + 0 ID=cds2838;Parent=gene2882;Dbxref=Genbank:WP_002211555.1;Name=WP_002211555.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_002211555.1;transl_table=11 NC_014029.1 RefSeq gene 3127278 3127616 . + . ID=gene2883;Name=YPZ3_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14445;old_locus_tag=YPZ3_2420 NC_014029.1 Protein Homology CDS 3127278 3127616 . + 0 ID=cds2839;Parent=gene2883;Dbxref=Genbank:WP_002211554.1;Name=WP_002211554.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002211554.1;transl_table=11 NC_014029.1 RefSeq gene 3127785 3128156 . - . ID=gene2884;Name=YPZ3_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14450;old_locus_tag=YPZ3_2421 NC_014029.1 Protein Homology CDS 3127785 3128156 . - 0 ID=cds2840;Parent=gene2884;Dbxref=Genbank:WP_002216118.1;Name=WP_002216118.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216118.1;transl_table=11 NC_014029.1 RefSeq gene 3128122 3128685 . - . ID=gene2885;Name=YPZ3_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14455;old_locus_tag=YPZ3_2422 NC_014029.1 Protein Homology CDS 3128122 3128685 . - 0 ID=cds2841;Parent=gene2885;Dbxref=Genbank:WP_002216119.1;Name=WP_002216119.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002216119.1;transl_table=11 NC_014029.1 RefSeq gene 3129149 3130339 . - . ID=gene2886;Name=YPZ3_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14460;old_locus_tag=YPZ3_2423 NC_014029.1 Protein Homology CDS 3129149 3130339 . - 0 ID=cds2842;Parent=gene2886;Dbxref=Genbank:WP_002211553.1;Name=WP_002211553.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=flavohemoprotein;protein_id=WP_002211553.1;transl_table=11 NC_014029.1 RefSeq gene 3130880 3132133 . + . ID=gene2887;Name=YPZ3_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14465;old_locus_tag=YPZ3_2424 NC_014029.1 Protein Homology CDS 3130880 3132133 . + 0 ID=cds2843;Parent=gene2887;Dbxref=Genbank:WP_002211552.1;Name=WP_002211552.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NC_014029.1 RefSeq gene 3132285 3132467 . + . ID=gene2888;Name=YPZ3_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14470 NC_014029.1 Protein Homology CDS 3132285 3132467 . + 0 ID=cds2844;Parent=gene2888;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11 NC_014029.1 RefSeq gene 3132586 3133125 . + . ID=gene2889;Name=YPZ3_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14475;old_locus_tag=YPZ3_2425 NC_014029.1 Protein Homology CDS 3132586 3133125 . + 0 ID=cds2845;Parent=gene2889;Dbxref=Genbank:WP_002222198.1;Name=WP_002222198.1;gbkey=CDS;product=attachment protein;protein_id=WP_002222198.1;transl_table=11 NC_014029.1 RefSeq gene 3133477 3134634 . + . ID=gene2890;Name=YPZ3_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14480;old_locus_tag=YPZ3_2426 NC_014029.1 Protein Homology CDS 3133477 3134634 . + 0 ID=cds2846;Parent=gene2890;Dbxref=Genbank:WP_002213316.1;Name=WP_002213316.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=WP_002213316.1;transl_table=11 NC_014029.1 RefSeq gene 3134631 3135992 . - . ID=gene2891;Name=YPZ3_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14485;old_locus_tag=YPZ3_2427 NC_014029.1 Protein Homology CDS 3134631 3135992 . - 0 ID=cds2847;Parent=gene2891;Dbxref=Genbank:WP_002213314.1;Name=WP_002213314.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_002213314.1;transl_table=11 NC_014029.1 RefSeq gene 3136134 3136808 . + . ID=gene2892;Name=YPZ3_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14490;old_locus_tag=YPZ3_2428 NC_014029.1 Protein Homology CDS 3136134 3136808 . + 0 ID=cds2848;Parent=gene2892;Dbxref=Genbank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213310.1;transl_table=11 NC_014029.1 RefSeq gene 3136799 3137821 . + . ID=gene2893;Name=YPZ3_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14495;old_locus_tag=YPZ3_2429 NC_014029.1 Protein Homology CDS 3136799 3137821 . + 0 ID=cds2849;Parent=gene2893;Dbxref=Genbank:WP_002213308.1;Name=WP_002213308.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002213308.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3137856 3138580 . + . ID=id225;gbkey=repeat_region NC_014029.1 RefSeq gene 3137968 3138426 . - . ID=gene2894;Name=YPZ3_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14500;old_locus_tag=YPZ3_2430 NC_014029.1 Protein Homology CDS 3137968 3138426 . - 0 ID=cds2850;Parent=gene2894;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3138630 3139433 . - . ID=gene2895;Name=YPZ3_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14505;old_locus_tag=YPZ3_2431 NC_014029.1 Protein Homology CDS 3138630 3139433 . - 0 ID=cds2851;Parent=gene2895;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11 NC_014029.1 RefSeq gene 3139552 3140325 . + . ID=gene2896;Name=YPZ3_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14510;old_locus_tag=YPZ3_2432 NC_014029.1 Protein Homology CDS 3139552 3140325 . + 0 ID=cds2852;Parent=gene2896;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NC_014029.1 RefSeq gene 3140481 3140975 . + . ID=gene2897;Name=YPZ3_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14515;old_locus_tag=YPZ3_2433 NC_014029.1 Protein Homology CDS 3140481 3140975 . + 0 ID=cds2853;Parent=gene2897;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NC_014029.1 RefSeq gene 3141029 3142258 . + . ID=gene2898;Name=YPZ3_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14520;old_locus_tag=YPZ3_2434 NC_014029.1 Protein Homology CDS 3141029 3142258 . + 0 ID=cds2854;Parent=gene2898;Dbxref=Genbank:WP_002209836.1;Name=WP_002209836.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002209836.1;transl_table=11 NC_014029.1 RefSeq gene 3142289 3142675 . + . ID=gene2899;Name=YPZ3_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14525;old_locus_tag=YPZ3_2435 NC_014029.1 Protein Homology CDS 3142289 3142675 . + 0 ID=cds2855;Parent=gene2899;Dbxref=Genbank:WP_002209835.1;Name=WP_002209835.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NC_014029.1 RefSeq gene 3142945 3143268 . + . ID=gene2900;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YPZ3_RS14530 NC_014029.1 Protein Homology CDS 3142945 3143268 . + 0 ID=cds2856;Parent=gene2900;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11 NC_014029.1 RefSeq gene 3143379 3143903 . + . ID=gene2901;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YPZ3_RS14535;old_locus_tag=YPZ3_2436 NC_014029.1 Protein Homology CDS 3143379 3143903 . + 0 ID=cds2857;Parent=gene2901;Dbxref=Genbank:WP_002209833.1;Name=WP_002209833.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_002209833.1;transl_table=11 NC_014029.1 RefSeq gene 3144308 3146098 . + . ID=gene2902;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YPZ3_RS14540;old_locus_tag=YPZ3_2437 NC_014029.1 Protein Homology CDS 3144308 3146098 . + 0 ID=cds2858;Parent=gene2902;Dbxref=Genbank:WP_042468833.1;Name=WP_042468833.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_042468833.1;transl_table=11 NC_014029.1 RefSeq gene 3146101 3146436 . + . ID=gene2903;Name=YPZ3_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14545;old_locus_tag=YPZ3_2438 NC_014029.1 Protein Homology CDS 3146101 3146436 . + 0 ID=cds2859;Parent=gene2903;Dbxref=Genbank:WP_002209831.1;Name=WP_002209831.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002209831.1;transl_table=11 NC_014029.1 RefSeq gene 3146466 3146666 . + . ID=gene2904;Name=YPZ3_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14550 NC_014029.1 Protein Homology CDS 3146466 3146666 . + 0 ID=cds2860;Parent=gene2904;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11 NC_014029.1 RefSeq gene 3146806 3148104 . + . ID=gene2905;Name=YPZ3_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14555;old_locus_tag=YPZ3_2439 NC_014029.1 Protein Homology CDS 3146806 3148104 . + 0 ID=cds2861;Parent=gene2905;Dbxref=Genbank:WP_002209829.1;Name=WP_002209829.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_002209829.1;transl_table=11 NC_014029.1 RefSeq gene 3148183 3149136 . + . ID=gene2906;Name=YPZ3_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14560;old_locus_tag=YPZ3_2440 NC_014029.1 Protein Homology CDS 3148183 3149136 . + 0 ID=cds2862;Parent=gene2906;Dbxref=Genbank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_002209828.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3149172 3149342 . + . ID=id226;gbkey=repeat_region NC_014029.1 RefSeq gene 3149474 3149794 . - . ID=gene2907;Name=YPZ3_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14565;old_locus_tag=YPZ3_2441 NC_014029.1 Protein Homology CDS 3149474 3149794 . - 0 ID=cds2863;Parent=gene2907;Dbxref=Genbank:WP_002215505.1;Name=WP_002215505.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215505.1;transl_table=11 NC_014029.1 RefSeq gene 3149760 3152918 . - . ID=gene2908;Name=YPZ3_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14570;old_locus_tag=YPZ3_2442 NC_014029.1 Protein Homology CDS 3149760 3152918 . - 0 ID=cds2864;Parent=gene2908;Dbxref=Genbank:WP_002215508.1;Name=WP_002215508.1;gbkey=CDS;product=pertactin;protein_id=WP_002215508.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3150988 3151137 . + . ID=id227;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 3151150 3151299 . + . ID=id228;gbkey=repeat_region NC_014029.1 RefSeq gene 3153476 3157621 . - . ID=gene2909;Name=YPZ3_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14575;old_locus_tag=YPZ3_2443 NC_014029.1 Protein Homology CDS 3153476 3157621 . - 0 ID=cds2865;Parent=gene2909;Dbxref=Genbank:WP_002215510.1;Name=WP_002215510.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215510.1;transl_table=11 NC_014029.1 RefSeq gene 3158136 3158393 . - . ID=gene2910;Name=YPZ3_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14580 NC_014029.1 Protein Homology CDS 3158136 3158393 . - 0 ID=cds2866;Parent=gene2910;Dbxref=Genbank:WP_002215513.1;Name=WP_002215513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215513.1;transl_table=11 NC_014029.1 RefSeq gene 3158568 3160988 . + . ID=gene2911;Name=YPZ3_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14585;old_locus_tag=YPZ3_2444 NC_014029.1 Protein Homology CDS 3158568 3160988 . + 0 ID=cds2867;Parent=gene2911;Dbxref=Genbank:WP_002215515.1;Name=WP_002215515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215515.1;transl_table=11 NC_014029.1 RefSeq gene 3161315 3161743 . + . ID=gene2912;Name=YPZ3_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14590;old_locus_tag=YPZ3_2445 NC_014029.1 Protein Homology CDS 3161315 3161743 . + 0 ID=cds2868;Parent=gene2912;Dbxref=Genbank:WP_002209821.1;Name=WP_002209821.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_002209821.1;transl_table=11 NC_014029.1 RefSeq gene 3162005 3163201 . + . ID=gene2913;Name=YPZ3_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14595;old_locus_tag=YPZ3_2446 NC_014029.1 Protein Homology CDS 3162005 3163201 . + 0 ID=cds2869;Parent=gene2913;Dbxref=Genbank:WP_002209820.1;Name=WP_002209820.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002209820.1;transl_table=11 NC_014029.1 RefSeq gene 3163355 3164104 . + . ID=gene2914;Name=YPZ3_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14600;old_locus_tag=YPZ3_2447 NC_014029.1 Protein Homology CDS 3163355 3164104 . + 0 ID=cds2870;Parent=gene2914;Dbxref=Genbank:WP_002209819.1;Name=WP_002209819.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_002209819.1;transl_table=11 NC_014029.1 RefSeq gene 3164094 3165131 . + . ID=gene2915;Name=YPZ3_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14605;old_locus_tag=YPZ3_2448 NC_014029.1 Protein Homology CDS 3164094 3165131 . + 0 ID=cds2871;Parent=gene2915;Dbxref=Genbank:WP_002209818.1;Name=WP_002209818.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_002209818.1;transl_table=11 NC_014029.1 RefSeq gene 3165193 3166320 . + . ID=gene2916;Name=YPZ3_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14610;old_locus_tag=YPZ3_2449 NC_014029.1 Protein Homology CDS 3165193 3166320 . + 0 ID=cds2872;Parent=gene2916;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11 NC_014029.1 RefSeq gene 3166529 3167803 . + . ID=gene2917;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YPZ3_RS14615;old_locus_tag=YPZ3_2450 NC_014029.1 Protein Homology CDS 3166529 3167803 . + 0 ID=cds2873;Parent=gene2917;Dbxref=Genbank:WP_002209816.1;Name=WP_002209816.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_002209816.1;transl_table=11 NC_014029.1 RefSeq gene 3167817 3168452 . + . ID=gene2918;Name=YPZ3_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14620;old_locus_tag=YPZ3_2451 NC_014029.1 Protein Homology CDS 3167817 3168452 . + 0 ID=cds2874;Parent=gene2918;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11 NC_014029.1 RefSeq gene 3168464 3169645 . + . ID=gene2919;Name=YPZ3_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14625;old_locus_tag=YPZ3_2452 NC_014029.1 Protein Homology CDS 3168464 3169645 . + 0 ID=cds2875;Parent=gene2919;Dbxref=Genbank:WP_002209814.1;Name=WP_002209814.1;gbkey=CDS;product=outer membrane protein assembly factor BamB;protein_id=WP_002209814.1;transl_table=11 NC_014029.1 RefSeq gene 3169793 3171280 . + . ID=gene2920;Name=YPZ3_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14630;old_locus_tag=YPZ3_2453 NC_014029.1 Protein Homology CDS 3169793 3171280 . + 0 ID=cds2876;Parent=gene2920;Dbxref=Genbank:WP_002209813.1;Name=WP_002209813.1;gbkey=CDS;product=GTPase Der;protein_id=WP_002209813.1;transl_table=11 NC_014029.1 RefSeq gene 3171627 3172583 . + . ID=gene2921;Name=YPZ3_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14635;old_locus_tag=YPZ3_2454 NC_014029.1 Protein Homology CDS 3171627 3172583 . + 0 ID=cds2877;Parent=gene2921;Dbxref=Genbank:WP_002209812.1;Name=WP_002209812.1;gbkey=CDS;product=transporter;protein_id=WP_002209812.1;transl_table=11 NC_014029.1 RefSeq gene 3172632 3172856 . + . ID=gene2922;Name=YPZ3_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14640 NC_014029.1 Protein Homology CDS 3172632 3172856 . + 0 ID=cds2878;Parent=gene2922;Dbxref=Genbank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209811.1;transl_table=11 NC_014029.1 RefSeq gene 3172957 3174336 . - . ID=gene2923;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YPZ3_RS14645;old_locus_tag=YPZ3_2455 NC_014029.1 Protein Homology CDS 3172957 3174336 . - 0 ID=cds2879;Parent=gene2923;Dbxref=Genbank:WP_002209810.1;Name=WP_002209810.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_002209810.1;transl_table=11 NC_014029.1 RefSeq gene 3174506 3175969 . + . ID=gene2924;Name=YPZ3_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14650;old_locus_tag=YPZ3_2456 NC_014029.1 Protein Homology CDS 3174506 3175969 . + 0 ID=cds2880;Parent=gene2924;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NC_014029.1 RefSeq gene 3176041 3176166 . - . ID=gene2925;Name=YPZ3_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14655 NC_014029.1 Protein Homology CDS 3176041 3176166 . - 0 ID=cds2881;Parent=gene2925;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11 NC_014029.1 RefSeq gene 3176149 3177726 . + . ID=gene2926;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YPZ3_RS14660;old_locus_tag=YPZ3_2457 NC_014029.1 Protein Homology CDS 3176149 3177726 . + 0 ID=cds2882;Parent=gene2926;Dbxref=Genbank:WP_002209807.1;Name=WP_002209807.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_002209807.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3177795 3177927 . + . ID=id229;gbkey=repeat_region NC_014029.1 RefSeq gene 3177938 3178111 . + . ID=gene2927;Name=YPZ3_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14665 NC_014029.1 Protein Homology CDS 3177938 3178111 . + 0 ID=cds2883;Parent=gene2927;Dbxref=Genbank:WP_025470750.1;Name=WP_025470750.1;gbkey=CDS;product=transposase;protein_id=WP_025470750.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3177948 3178670 . + . ID=id230;gbkey=repeat_region NC_014029.1 RefSeq gene 3178101 3178559 . + . ID=gene2928;Name=YPZ3_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14670;old_locus_tag=YPZ3_2458 NC_014029.1 Protein Homology CDS 3178101 3178559 . + 0 ID=cds2884;Parent=gene2928;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3178719 3179198 . - . ID=gene2929;Name=YPZ3_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14675;old_locus_tag=YPZ3_2459 NC_014029.1 Protein Homology CDS 3178719 3179198 . - 0 ID=cds2885;Parent=gene2929;Dbxref=Genbank:WP_002209806.1;Name=WP_002209806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209806.1;transl_table=11 NC_014029.1 RefSeq gene 3179222 3179620 . - . ID=gene2930;Name=YPZ3_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14680;old_locus_tag=YPZ3_2460 NC_014029.1 Protein Homology CDS 3179222 3179620 . - 0 ID=cds2886;Parent=gene2930;Dbxref=Genbank:WP_002216975.1;Name=WP_002216975.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216975.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3179640 3179785 . + . ID=id231;gbkey=repeat_region NC_014029.1 RefSeq gene 3179684 3180079 . - . ID=gene2931;Name=YPZ3_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14685 NC_014029.1 Protein Homology CDS 3179684 3180079 . - 0 ID=cds2887;Parent=gene2931;Dbxref=Genbank:WP_002415472.1;Name=WP_002415472.1;gbkey=CDS;product=membrane protein;protein_id=WP_002415472.1;transl_table=11 NC_014029.1 RefSeq gene 3180141 3180536 . - . ID=gene2932;Name=YPZ3_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14690 NC_014029.1 Protein Homology CDS 3180141 3180536 . - 0 ID=cds2888;Parent=gene2932;Dbxref=Genbank:WP_002216979.1;Name=WP_002216979.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216979.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3180556 3180701 . + . ID=id232;gbkey=repeat_region NC_014029.1 RefSeq gene 3180600 3180995 . - . ID=gene2933;Name=YPZ3_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14695;old_locus_tag=YPZ3_2461 NC_014029.1 Protein Homology CDS 3180600 3180995 . - 0 ID=cds2889;Parent=gene2933;Dbxref=Genbank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216980.1;transl_table=11 NC_014029.1 RefSeq gene 3180992 3181627 . - . ID=gene2934;Name=YPZ3_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14700;old_locus_tag=YPZ3_2462 NC_014029.1 Protein Homology CDS 3180992 3181627 . - 0 ID=cds2890;Parent=gene2934;Dbxref=Genbank:WP_002209805.1;Name=WP_002209805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209805.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3181644 3182963 . + . ID=id233;gbkey=repeat_region NC_014029.1 RefSeq gene 3181718 3182926 . + . ID=gene2935;Name=YPZ3_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14705;old_locus_tag=YPZ3_2463 NC_014029.1 Protein Homology CDS 3181718 3182926 . + 0 ID=cds2891;Parent=gene2935;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 3182938 3183216 . - . ID=gene2936;Name=YPZ3_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14710 NC_014029.1 Protein Homology CDS 3182938 3183216 . - 0 ID=cds2892;Parent=gene2936;Dbxref=Genbank:WP_002209804.1;Name=WP_002209804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209804.1;transl_table=11 NC_014029.1 RefSeq gene 3183275 3183742 . - . ID=gene2937;Name=YPZ3_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14715;old_locus_tag=YPZ3_2464 NC_014029.1 Protein Homology CDS 3183275 3183742 . - 0 ID=cds2893;Parent=gene2937;Dbxref=Genbank:WP_002209803.1;Name=WP_002209803.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209803.1;transl_table=11 NC_014029.1 RefSeq gene 3184264 3185064 . + . ID=gene2938;Name=YPZ3_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14720;old_locus_tag=YPZ3_2465 NC_014029.1 Protein Homology CDS 3184264 3185064 . + 0 ID=cds2894;Parent=gene2938;Dbxref=Genbank:WP_002209801.1;Name=WP_002209801.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_002209801.1;transl_table=11 NC_014029.1 RefSeq gene 3185126 3185872 . - . ID=gene2939;Name=YPZ3_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14725;old_locus_tag=YPZ3_2466 NC_014029.1 Protein Homology CDS 3185126 3185872 . - 0 ID=cds2895;Parent=gene2939;Dbxref=Genbank:WP_002232352.1;Name=WP_002232352.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002232352.1;transl_table=11 NC_014029.1 RefSeq gene 3186245 3186754 . + . ID=gene2940;Name=YPZ3_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14730;old_locus_tag=YPZ3_2467 NC_014029.1 Protein Homology CDS 3186245 3186754 . + 0 ID=cds2896;Parent=gene2940;Dbxref=Genbank:WP_002209800.1;Name=WP_002209800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209800.1;transl_table=11 NC_014029.1 RefSeq gene 3187041 3187931 . - . ID=gene2941;Name=YPZ3_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14735;old_locus_tag=YPZ3_2468 NC_014029.1 Protein Homology CDS 3187041 3187931 . - 0 ID=cds2897;Parent=gene2941;Dbxref=Genbank:WP_002209799.1;Name=WP_002209799.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_002209799.1;transl_table=11 NC_014029.1 RefSeq gene 3188567 3189961 . - . ID=gene2942;Name=YPZ3_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14740;old_locus_tag=YPZ3_2469 NC_014029.1 Protein Homology CDS 3188567 3189961 . - 0 ID=cds2898;Parent=gene2942;Dbxref=Genbank:WP_002209798.1;Name=WP_002209798.1;gbkey=CDS;product=protease;protein_id=WP_002209798.1;transl_table=11 NC_014029.1 RefSeq gene 3190236 3190574 . - . ID=gene2943;Name=YPZ3_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14745;old_locus_tag=YPZ3_2470 NC_014029.1 Protein Homology CDS 3190236 3190574 . - 0 ID=cds2899;Parent=gene2943;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11 NC_014029.1 RefSeq gene 3190711 3191430 . - . ID=gene2944;Name=YPZ3_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14750;old_locus_tag=YPZ3_2471 NC_014029.1 Protein Homology CDS 3190711 3191430 . - 0 ID=cds2900;Parent=gene2944;Dbxref=Genbank:WP_002209796.1;Name=WP_002209796.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209796.1;transl_table=11 NC_014029.1 RefSeq gene 3191440 3191697 . - . ID=gene2945;Name=YPZ3_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14755 NC_014029.1 Protein Homology CDS 3191440 3191697 . - 0 ID=cds2901;Parent=gene2945;Dbxref=Genbank:WP_002228394.1;Name=WP_002228394.1;gbkey=CDS;product=ATPase;protein_id=WP_002228394.1;transl_table=11 NC_014029.1 RefSeq gene 3191709 3192824 . - . ID=gene2946;Name=YPZ3_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14760;old_locus_tag=YPZ3_2472 NC_014029.1 Protein Homology CDS 3191709 3192824 . - 0 ID=cds2902;Parent=gene2946;Dbxref=Genbank:WP_002228395.1;Name=WP_002228395.1;gbkey=CDS;product=signal transduction histidine kinase;protein_id=WP_002228395.1;transl_table=11 NC_014029.1 RefSeq gene 3192855 3194252 . - . ID=gene2947;Name=YPZ3_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14765;old_locus_tag=YPZ3_2473 NC_014029.1 Protein Homology CDS 3192855 3194252 . - 0 ID=cds2903;Parent=gene2947;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11 NC_014029.1 RefSeq gene 3194286 3197360 . - . ID=gene2948;Name=YPZ3_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14770;old_locus_tag=YPZ3_2474 NC_014029.1 Protein Homology CDS 3194286 3197360 . - 0 ID=cds2904;Parent=gene2948;Dbxref=Genbank:WP_002209794.1;Name=WP_002209794.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_002209794.1;transl_table=11 NC_014029.1 RefSeq gene 3197357 3200515 . - . ID=gene2949;Name=YPZ3_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14775;old_locus_tag=YPZ3_2475 NC_014029.1 Protein Homology CDS 3197357 3200515 . - 0 ID=cds2905;Parent=gene2949;Dbxref=Genbank:WP_002209793.1;Name=WP_002209793.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_002209793.1;transl_table=11 NC_014029.1 RefSeq gene 3200515 3201849 . - . ID=gene2950;Name=YPZ3_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14780;old_locus_tag=YPZ3_2476 NC_014029.1 Protein Homology CDS 3200515 3201849 . - 0 ID=cds2906;Parent=gene2950;Dbxref=Genbank:WP_002214676.1;Name=WP_002214676.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_002214676.1;transl_table=11 NC_014029.1 RefSeq gene 3202213 3203298 . - . ID=gene2951;Name=YPZ3_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14785;old_locus_tag=YPZ3_2477 NC_014029.1 Protein Homology CDS 3202213 3203298 . - 0 ID=cds2907;Parent=gene2951;Dbxref=Genbank:WP_002209791.1;Name=WP_002209791.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209791.1;transl_table=11 NC_014029.1 RefSeq gene 3203681 3205186 . - . ID=gene2952;Name=YPZ3_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14790;old_locus_tag=YPZ3_2478 NC_014029.1 Protein Homology CDS 3203681 3205186 . - 0 ID=cds2908;Parent=gene2952;Dbxref=Genbank:WP_002209790.1;Name=WP_002209790.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002209790.1;transl_table=11 NC_014029.1 RefSeq gene 3205368 3206657 . + . ID=gene2953;Name=YPZ3_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14795;old_locus_tag=YPZ3_2479 NC_014029.1 Protein Homology CDS 3205368 3206657 . + 0 ID=cds2909;Parent=gene2953;Dbxref=Genbank:WP_002209789.1;Name=WP_002209789.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_002209789.1;transl_table=11 NC_014029.1 RefSeq gene 3206710 3207738 . + . ID=gene2954;Name=YPZ3_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14800;old_locus_tag=YPZ3_2480 NC_014029.1 Protein Homology CDS 3206710 3207738 . + 0 ID=cds2910;Parent=gene2954;Dbxref=Genbank:WP_002209788.1;Name=WP_002209788.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_002209788.1;transl_table=11 NC_014029.1 RefSeq gene 3207785 3209050 . + . ID=gene2955;Name=YPZ3_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14805;old_locus_tag=YPZ3_2481 NC_014029.1 Protein Homology CDS 3207785 3209050 . + 0 ID=cds2911;Parent=gene2955;Dbxref=Genbank:WP_002209787.1;Name=WP_002209787.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209787.1;transl_table=11 NC_014029.1 RefSeq gene 3209112 3209960 . + . ID=gene2956;Name=YPZ3_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14810;old_locus_tag=YPZ3_2482 NC_014029.1 Protein Homology CDS 3209112 3209960 . + 0 ID=cds2912;Parent=gene2956;Dbxref=Genbank:WP_002209786.1;Name=WP_002209786.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NC_014029.1 RefSeq gene 3210232 3211584 . - . ID=gene2957;Name=YPZ3_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14815;old_locus_tag=YPZ3_2483 NC_014029.1 Protein Homology CDS 3210232 3211584 . - 0 ID=cds2913;Parent=gene2957;Dbxref=Genbank:WP_002209785.1;Name=WP_002209785.1;gbkey=CDS;product=chaperone;protein_id=WP_002209785.1;transl_table=11 NC_014029.1 RefSeq gene 3211724 3213199 . - . ID=gene2958;Name=YPZ3_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14820;old_locus_tag=YPZ3_2484 NC_014029.1 Protein Homology CDS 3211724 3213199 . - 0 ID=cds2914;Parent=gene2958;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11 NC_014029.1 RefSeq gene 3213251 3213439 . - . ID=gene2959;Name=YPZ3_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14825 NC_014029.1 Protein Homology CDS 3213251 3213439 . - 0 ID=cds2915;Parent=gene2959;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11 NC_014029.1 RefSeq gene 3213575 3215134 . - . ID=gene2960;Name=YPZ3_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14830;old_locus_tag=YPZ3_2485 NC_014029.1 Protein Homology CDS 3213575 3215134 . - 0 ID=cds2916;Parent=gene2960;Dbxref=Genbank:WP_002209783.1;Name=WP_002209783.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NC_014029.1 RefSeq gene 3215145 3217208 . - . ID=gene2961;Name=YPZ3_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14835;old_locus_tag=YPZ3_2486 NC_014029.1 Protein Homology CDS 3215145 3217208 . - 0 ID=cds2917;Parent=gene2961;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11 NC_014029.1 RefSeq gene 3217479 3219710 . + . ID=gene2962;Name=YPZ3_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14840;old_locus_tag=YPZ3_2487 NC_014029.1 Protein Homology CDS 3217479 3219710 . + 0 ID=cds2918;Parent=gene2962;Dbxref=Genbank:WP_002214670.1;Name=WP_002214670.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_002214670.1;transl_table=11 NC_014029.1 RefSeq gene 3219770 3221422 . + . ID=gene2963;Name=YPZ3_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14845;old_locus_tag=YPZ3_2488 NC_014029.1 Protein Homology CDS 3219770 3221422 . + 0 ID=cds2919;Parent=gene2963;Dbxref=Genbank:WP_032465662.1;Name=WP_032465662.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_032465662.1;transl_table=11 NC_014029.1 RefSeq gene 3221450 3222262 . + . ID=gene2964;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPZ3_RS14850;old_locus_tag=YPZ3_2489 NC_014029.1 Protein Homology CDS 3221450 3222262 . + 0 ID=cds2920;Parent=gene2964;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11 NC_014029.1 RefSeq gene 3222490 3222870 . + . ID=gene2965;Name=YPZ3_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14855;old_locus_tag=YPZ3_2490 NC_014029.1 Protein Homology CDS 3222490 3222870 . + 0 ID=cds2921;Parent=gene2965;Dbxref=Genbank:WP_002214664.1;Name=WP_002214664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214664.1;transl_table=11 NC_014029.1 RefSeq gene 3222957 3223678 . + . ID=gene2966;Name=YPZ3_RS14860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS14860;pseudo=true NC_014029.1 Protein Homology CDS 3222957 3223678 . + 0 ID=cds2922;Parent=gene2966;exception=annotated by transcript or proteomic data;gbkey=CDS;product=N-methylation of lysine residues in flagellin;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3223772 3224317 . - . ID=gene2967;Name=YPZ3_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14865;old_locus_tag=YPZ3_2492 NC_014029.1 Protein Homology CDS 3223772 3224317 . - 0 ID=cds2923;Parent=gene2967;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NC_014029.1 RefSeq gene 3224546 3225184 . - . ID=gene2968;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YPZ3_RS14870;old_locus_tag=YPZ3_2493 NC_014029.1 Protein Homology CDS 3224546 3225184 . - 0 ID=cds2924;Parent=gene2968;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NC_014029.1 RefSeq gene 3225299 3226342 . - . ID=gene2969;Name=YPZ3_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14875;old_locus_tag=YPZ3_2494 NC_014029.1 Protein Homology CDS 3225299 3226342 . - 0 ID=cds2925;Parent=gene2969;Dbxref=Genbank:WP_002209777.1;Name=WP_002209777.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002209777.1;transl_table=11 NC_014029.1 RefSeq gene 3226739 3227365 . + . ID=gene2970;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YPZ3_RS14880;old_locus_tag=YPZ3_2495 NC_014029.1 Protein Homology CDS 3226739 3227365 . + 0 ID=cds2926;Parent=gene2970;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3227389 3228110 . + . ID=id234;gbkey=repeat_region NC_014029.1 RefSeq gene 3227541 3227999 . + . ID=gene2971;Name=YPZ3_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14885;old_locus_tag=YPZ3_2496 NC_014029.1 Protein Homology CDS 3227541 3227999 . + 0 ID=cds2927;Parent=gene2971;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3228146 3228358 . - . ID=gene2972;Name=YPZ3_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14890 NC_014029.1 Protein Homology CDS 3228146 3228358 . - 0 ID=cds2928;Parent=gene2972;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11 NC_014029.1 RefSeq gene 3228373 3229239 . - . ID=gene2973;Name=YPZ3_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14895;old_locus_tag=YPZ3_2497 NC_014029.1 Protein Homology CDS 3228373 3229239 . - 0 ID=cds2929;Parent=gene2973;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11 NC_014029.1 RefSeq gene 3229454 3229530 . + . ID=gene2974;Name=YPZ3_RS14900;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS14900;old_locus_tag=YPZ3_t36 NC_014029.1 tRNAscan-SE tRNA 3229454 3229530 . + . ID=rna41;Parent=gene2974;anticodon=(pos:3229488..3229490);gbkey=tRNA;product=tRNA-Arg NC_014029.1 tRNAscan-SE exon 3229454 3229530 . + . ID=id235;Parent=rna41;anticodon=(pos:3229488..3229490);gbkey=tRNA;product=tRNA-Arg NC_014029.1 RefSeq gene 3229594 3229776 . - . ID=gene2975;Name=YPZ3_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14905 NC_014029.1 Protein Homology CDS 3229594 3229776 . - 0 ID=cds2930;Parent=gene2975;Dbxref=Genbank:WP_002215270.1;Name=WP_002215270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215270.1;transl_table=11 NC_014029.1 RefSeq gene 3230035 3230235 . - . ID=gene2976;Name=YPZ3_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14910 NC_014029.1 Protein Homology CDS 3230035 3230235 . - 0 ID=cds2931;Parent=gene2976;Dbxref=Genbank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NC_014029.1 RefSeq gene 3230349 3230846 . - . ID=gene2977;Name=YPZ3_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14915;old_locus_tag=YPZ3_2498 NC_014029.1 Protein Homology CDS 3230349 3230846 . - 0 ID=cds2932;Parent=gene2977;Dbxref=Genbank:WP_002228356.1;Name=WP_002228356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228356.1;transl_table=11 NC_014029.1 RefSeq gene 3230884 3230997 . - . ID=gene2978;Name=YPZ3_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14920 NC_014029.1 Protein Homology CDS 3230884 3230997 . - 0 ID=cds2933;Parent=gene2978;Dbxref=Genbank:WP_002228357.1;Name=WP_002228357.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228357.1;transl_table=11 NC_014029.1 RefSeq gene 3230982 3231320 . - . ID=gene2979;Name=YPZ3_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14925 NC_014029.1 Protein Homology CDS 3230982 3231320 . - 0 ID=cds2934;Parent=gene2979;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NC_014029.1 RefSeq gene 3231893 3232099 . + . ID=gene2980;Name=YPZ3_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14930 NC_014029.1 Protein Homology CDS 3231893 3232099 . + 0 ID=cds2935;Parent=gene2980;Dbxref=Genbank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NC_014029.1 RefSeq gene 3232096 3232272 . + . ID=gene2981;Name=YPZ3_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14935 NC_014029.1 Protein Homology CDS 3232096 3232272 . + 0 ID=cds2936;Parent=gene2981;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11 NC_014029.1 RefSeq gene 3232499 3233101 . + . ID=gene2982;Name=YPZ3_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14940;old_locus_tag=YPZ3_2499 NC_014029.1 Protein Homology CDS 3232499 3233101 . + 0 ID=cds2937;Parent=gene2982;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11 NC_014029.1 RefSeq gene 3233094 3234023 . + . ID=gene2983;Name=YPZ3_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14945;old_locus_tag=YPZ3_2500 NC_014029.1 Protein Homology CDS 3233094 3234023 . + 0 ID=cds2938;Parent=gene2983;Dbxref=Genbank:WP_002209769.1;Name=WP_002209769.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_002209769.1;transl_table=11 NC_014029.1 RefSeq gene 3234033 3234665 . + . ID=gene2984;Name=YPZ3_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14950;old_locus_tag=YPZ3_2501 NC_014029.1 Protein Homology CDS 3234033 3234665 . + 0 ID=cds2939;Parent=gene2984;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11 NC_014029.1 RefSeq gene 3234662 3236425 . + . ID=gene2985;Name=YPZ3_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14955;old_locus_tag=YPZ3_2502 NC_014029.1 Protein Homology CDS 3234662 3236425 . + 0 ID=cds2940;Parent=gene2985;Dbxref=Genbank:WP_002209767.1;Name=WP_002209767.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002209767.1;transl_table=11 NC_014029.1 RefSeq gene 3236418 3237737 . + . ID=gene2986;Name=YPZ3_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14960;old_locus_tag=YPZ3_2503 NC_014029.1 Protein Homology CDS 3236418 3237737 . + 0 ID=cds2941;Parent=gene2986;Dbxref=Genbank:WP_002209766.1;Name=WP_002209766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209766.1;transl_table=11 NC_014029.1 RefSeq gene 3237719 3238120 . + . ID=gene2987;Name=YPZ3_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14965;old_locus_tag=YPZ3_2504 NC_014029.1 Protein Homology CDS 3237719 3238120 . + 0 ID=cds2942;Parent=gene2987;Dbxref=Genbank:WP_002209765.1;Name=WP_002209765.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209765.1;transl_table=11 NC_014029.1 RefSeq gene 3238217 3238522 . + . ID=gene2988;Name=YPZ3_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14970;old_locus_tag=YPZ3_2505 NC_014029.1 Protein Homology CDS 3238217 3238522 . + 0 ID=cds2943;Parent=gene2988;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3238821 3240779 . + . ID=id236;gbkey=repeat_region NC_014029.1 RefSeq gene 3238889 3239668 . - . ID=gene2989;Name=YPZ3_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14975;old_locus_tag=YPZ3_2506 NC_014029.1 Protein Homology CDS 3238889 3239668 . - 0 ID=cds2944;Parent=gene2989;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 3239668 3240690 . - . ID=gene2990;Name=YPZ3_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14980;old_locus_tag=YPZ3_2507 NC_014029.1 Protein Homology CDS 3239668 3240690 . - 0 ID=cds2945;Parent=gene2990;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 3240784 3241677 . + . ID=gene2991;Name=YPZ3_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14985;old_locus_tag=YPZ3_2508 NC_014029.1 Protein Homology CDS 3240784 3241677 . + 0 ID=cds2946;Parent=gene2991;Dbxref=Genbank:WP_002209764.1;Name=WP_002209764.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11 NC_014029.1 RefSeq gene 3241732 3242721 . - . ID=gene2992;Name=YPZ3_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14990;old_locus_tag=YPZ3_2509 NC_014029.1 Protein Homology CDS 3241732 3242721 . - 0 ID=cds2947;Parent=gene2992;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NC_014029.1 RefSeq gene 3242747 3243598 . - . ID=gene2993;Name=YPZ3_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS14995;old_locus_tag=YPZ3_2510 NC_014029.1 Protein Homology CDS 3242747 3243598 . - 0 ID=cds2948;Parent=gene2993;Dbxref=Genbank:WP_002209762.1;Name=WP_002209762.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_002209762.1;transl_table=11 NC_014029.1 RefSeq gene 3243789 3243914 . + . ID=gene2994;Name=YPZ3_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15000 NC_014029.1 Protein Homology CDS 3243789 3243914 . + 0 ID=cds2949;Parent=gene2994;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NC_014029.1 RefSeq gene 3243911 3244054 . + . ID=gene2995;Name=YPZ3_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15005 NC_014029.1 Protein Homology CDS 3243911 3244054 . + 0 ID=cds2950;Parent=gene2995;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NC_014029.1 RefSeq gene 3244071 3245699 . + . ID=gene2996;Name=YPZ3_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15010;old_locus_tag=YPZ3_2511 NC_014029.1 Protein Homology CDS 3244071 3245699 . + 0 ID=cds2951;Parent=gene2996;Dbxref=Genbank:WP_002209759.1;Name=WP_002209759.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209759.1;transl_table=11 NC_014029.1 RefSeq gene 3245778 3248159 . - . ID=gene2997;Name=YPZ3_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15015;old_locus_tag=YPZ3_2512 NC_014029.1 Protein Homology CDS 3245778 3248159 . - 0 ID=cds2952;Parent=gene2997;Dbxref=Genbank:WP_002209758.1;Name=WP_002209758.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_002209758.1;transl_table=11 NC_014029.1 RefSeq gene 3248318 3248848 . - . ID=gene2998;Name=YPZ3_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15020;old_locus_tag=YPZ3_2513 NC_014029.1 Protein Homology CDS 3248318 3248848 . - 0 ID=cds2953;Parent=gene2998;Dbxref=Genbank:WP_002209757.1;Name=WP_002209757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209757.1;transl_table=11 NC_014029.1 RefSeq gene 3248841 3251048 . - . ID=gene2999;Name=YPZ3_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15025;old_locus_tag=YPZ3_2514 NC_014029.1 Protein Homology CDS 3248841 3251048 . - 0 ID=cds2954;Parent=gene2999;Dbxref=Genbank:WP_002209756.1;Name=WP_002209756.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209756.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3251428 3252746 . + . ID=id237;gbkey=repeat_region NC_014029.1 RefSeq gene 3251500 3252708 . + . ID=gene3000;Name=YPZ3_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15030;old_locus_tag=YPZ3_2515 NC_014029.1 Protein Homology CDS 3251500 3252708 . + 0 ID=cds2955;Parent=gene3000;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 3252787 3253095 . + . ID=gene3001;Name=YPZ3_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15035;old_locus_tag=YPZ3_2516 NC_014029.1 Protein Homology CDS 3252787 3253095 . + 0 ID=cds2956;Parent=gene3001;Dbxref=Genbank:WP_002209754.1;Name=WP_002209754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209754.1;transl_table=11 NC_014029.1 RefSeq gene 3253110 3253691 . - . ID=gene3002;Name=YPZ3_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15040;old_locus_tag=YPZ3_2517 NC_014029.1 Protein Homology CDS 3253110 3253691 . - 0 ID=cds2957;Parent=gene3002;Dbxref=Genbank:WP_002209753.1;Name=WP_002209753.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209753.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3254029 3254202 . + . ID=id238;gbkey=repeat_region NC_014029.1 RefSeq gene 3254226 3256142 . - . ID=gene3003;Name=YPZ3_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15045;old_locus_tag=YPZ3_2518 NC_014029.1 Protein Homology CDS 3254226 3256142 . - 0 ID=cds2958;Parent=gene3003;Dbxref=Genbank:WP_002209752.1;Name=WP_002209752.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209752.1;transl_table=11 NC_014029.1 RefSeq gene 3256951 3257190 . + . ID=gene3004;Name=YPZ3_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15050 NC_014029.1 Protein Homology CDS 3256951 3257190 . + 0 ID=cds2959;Parent=gene3004;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NC_014029.1 RefSeq gene 3257229 3257480 . + . ID=gene3005;Name=YPZ3_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15055 NC_014029.1 Protein Homology CDS 3257229 3257480 . + 0 ID=cds2960;Parent=gene3005;Dbxref=Genbank:WP_002227852.1;Name=WP_002227852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227852.1;transl_table=11 NC_014029.1 RefSeq gene 3257504 3258076 . + . ID=gene3006;Name=YPZ3_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15060;old_locus_tag=YPZ3_2519 NC_014029.1 Protein Homology CDS 3257504 3258076 . + 0 ID=cds2961;Parent=gene3006;Dbxref=Genbank:WP_002209749.1;Name=WP_002209749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209749.1;transl_table=11 NC_014029.1 RefSeq gene 3258088 3258489 . - . ID=gene3007;Name=YPZ3_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15065 NC_014029.1 Protein Homology CDS 3258088 3258489 . - 0 ID=cds2962;Parent=gene3007;Dbxref=Genbank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209748.1;transl_table=11 NC_014029.1 RefSeq gene 3258722 3259124 . - . ID=gene3008;Name=YPZ3_RS15070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS15070;pseudo=true NC_014029.1 Protein Homology CDS 3258722 3259124 . - 0 ID=cds2963;Parent=gene3008;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3259392 3259973 . - . ID=gene3009;Name=YPZ3_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15075;old_locus_tag=YPZ3_2520 NC_014029.1 Protein Homology CDS 3259392 3259973 . - 0 ID=cds2964;Parent=gene3009;Dbxref=Genbank:WP_002216002.1;Name=WP_002216002.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216002.1;transl_table=11 NC_014029.1 RefSeq gene 3260646 3260891 . + . ID=gene3010;Name=YPZ3_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15080 NC_014029.1 Protein Homology CDS 3260646 3260891 . + 0 ID=cds2965;Parent=gene3010;Dbxref=Genbank:WP_002209745.1;Name=WP_002209745.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002209745.1;transl_table=11 NC_014029.1 RefSeq gene 3261104 3262513 . - . ID=gene3011;Name=YPZ3_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15085;old_locus_tag=YPZ3_2521 NC_014029.1 Protein Homology CDS 3261104 3262513 . - 0 ID=cds2966;Parent=gene3011;Dbxref=Genbank:WP_002209744.1;Name=WP_002209744.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_002209744.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3262633 3263951 . + . ID=id239;gbkey=repeat_region NC_014029.1 RefSeq gene 3262670 3263878 . - . ID=gene3012;Name=YPZ3_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15090;old_locus_tag=YPZ3_2522 NC_014029.1 Protein Homology CDS 3262670 3263878 . - 0 ID=cds2967;Parent=gene3012;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 3264018 3265275 . + . ID=gene3013;Name=YPZ3_RS15095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS15095;old_locus_tag=YPZ3_2523;pseudo=true NC_014029.1 Protein Homology CDS 3264018 3265275 . + 0 ID=cds2968;Parent=gene3013;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3265392 3265940 . - . ID=gene3014;Name=YPZ3_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15100;old_locus_tag=YPZ3_2524 NC_014029.1 Protein Homology CDS 3265392 3265940 . - 0 ID=cds2969;Parent=gene3014;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11 NC_014029.1 RefSeq gene 3266162 3266713 . - . ID=gene3015;Name=YPZ3_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15105;old_locus_tag=YPZ3_2525 NC_014029.1 Protein Homology CDS 3266162 3266713 . - 0 ID=cds2970;Parent=gene3015;Dbxref=Genbank:WP_002264676.1;Name=WP_002264676.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002264676.1;transl_table=11 NC_014029.1 RefSeq gene 3266901 3267593 . - . ID=gene3016;Name=YPZ3_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15110;old_locus_tag=YPZ3_2526 NC_014029.1 Protein Homology CDS 3266901 3267593 . - 0 ID=cds2971;Parent=gene3016;Dbxref=Genbank:WP_002209740.1;Name=WP_002209740.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_002209740.1;transl_table=11 NC_014029.1 RefSeq gene 3267947 3268855 . + . ID=gene3017;Name=YPZ3_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15115;old_locus_tag=YPZ3_2527 NC_014029.1 Protein Homology CDS 3267947 3268855 . + 0 ID=cds2972;Parent=gene3017;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11 NC_014029.1 RefSeq gene 3268979 3269776 . - . ID=gene3018;Name=YPZ3_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15120;old_locus_tag=YPZ3_2528 NC_014029.1 Protein Homology CDS 3268979 3269776 . - 0 ID=cds2973;Parent=gene3018;Dbxref=Genbank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_002209738.1;transl_table=11 NC_014029.1 RefSeq gene 3269790 3270506 . - . ID=gene3019;Name=YPZ3_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15125;old_locus_tag=YPZ3_2529 NC_014029.1 Protein Homology CDS 3269790 3270506 . - 0 ID=cds2974;Parent=gene3019;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11 NC_014029.1 RefSeq gene 3270503 3271189 . - . ID=gene3020;Name=YPZ3_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15130;old_locus_tag=YPZ3_2530 NC_014029.1 Protein Homology CDS 3270503 3271189 . - 0 ID=cds2975;Parent=gene3020;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NC_014029.1 RefSeq gene 3271292 3272074 . - . ID=gene3021;Name=YPZ3_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15135;old_locus_tag=YPZ3_2531 NC_014029.1 Protein Homology CDS 3271292 3272074 . - 0 ID=cds2976;Parent=gene3021;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11 NC_014029.1 RefSeq gene 3272599 3273171 . - . ID=gene3022;Name=YPZ3_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15140;old_locus_tag=YPZ3_2532 NC_014029.1 Protein Homology CDS 3272599 3273171 . - 0 ID=cds2977;Parent=gene3022;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11 NC_014029.1 RefSeq gene 3273418 3274935 . - . ID=gene3023;Name=YPZ3_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15145;old_locus_tag=YPZ3_2533 NC_014029.1 Protein Homology CDS 3273418 3274935 . - 0 ID=cds2978;Parent=gene3023;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NC_014029.1 RefSeq gene 3274948 3275457 . - . ID=gene3024;Name=YPZ3_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15150;old_locus_tag=YPZ3_2534 NC_014029.1 Protein Homology CDS 3274948 3275457 . - 0 ID=cds2979;Parent=gene3024;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NC_014029.1 RefSeq gene 3275769 3276491 . - . ID=gene3025;Name=YPZ3_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15155;old_locus_tag=YPZ3_2535 NC_014029.1 Protein Homology CDS 3275769 3276491 . - 0 ID=cds2980;Parent=gene3025;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NC_014029.1 RefSeq gene 3276611 3277915 . - . ID=gene3026;Name=YPZ3_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15160;old_locus_tag=YPZ3_2536 NC_014029.1 Protein Homology CDS 3276611 3277915 . - 0 ID=cds2981;Parent=gene3026;Dbxref=Genbank:WP_002209730.1;Name=WP_002209730.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NC_014029.1 RefSeq gene 3278164 3279078 . - . ID=gene3027;Name=YPZ3_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15165;old_locus_tag=YPZ3_2537 NC_014029.1 Protein Homology CDS 3278164 3279078 . - 0 ID=cds2982;Parent=gene3027;Dbxref=Genbank:WP_002209729.1;Name=WP_002209729.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NC_014029.1 RefSeq gene 3279309 3279971 . - . ID=gene3028;Name=YPZ3_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15170;old_locus_tag=YPZ3_2538 NC_014029.1 Protein Homology CDS 3279309 3279971 . - 0 ID=cds2983;Parent=gene3028;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11 NC_014029.1 RefSeq gene 3280128 3280958 . - . ID=gene3029;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=YPZ3_RS15175;old_locus_tag=YPZ3_2539 NC_014029.1 Protein Homology CDS 3280128 3280958 . - 0 ID=cds2984;Parent=gene3029;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11 NC_014029.1 RefSeq gene 3281009 3282019 . - . ID=gene3030;Name=YPZ3_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15180;old_locus_tag=YPZ3_2540 NC_014029.1 Protein Homology CDS 3281009 3282019 . - 0 ID=cds2985;Parent=gene3030;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NC_014029.1 RefSeq gene 3282189 3283316 . - . ID=gene3031;Name=YPZ3_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15185;old_locus_tag=YPZ3_2541 NC_014029.1 Protein Homology CDS 3282189 3283316 . - 0 ID=cds2986;Parent=gene3031;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11 NC_014029.1 RefSeq gene 3283363 3284148 . - . ID=gene3032;Name=YPZ3_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15190;old_locus_tag=YPZ3_2542 NC_014029.1 Protein Homology CDS 3283363 3284148 . - 0 ID=cds2987;Parent=gene3032;Dbxref=Genbank:WP_002209724.1;Name=WP_002209724.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209724.1;transl_table=11 NC_014029.1 RefSeq gene 3284135 3284296 . - . ID=gene3033;Name=YPZ3_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15195 NC_014029.1 Protein Homology CDS 3284135 3284296 . - 0 ID=cds2988;Parent=gene3033;Dbxref=Genbank:WP_002209723.1;Name=WP_002209723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209723.1;transl_table=11 NC_014029.1 RefSeq gene 3284374 3285291 . + . ID=gene3034;Name=YPZ3_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15200;old_locus_tag=YPZ3_2543 NC_014029.1 Protein Homology CDS 3284374 3285291 . + 0 ID=cds2989;Parent=gene3034;Dbxref=Genbank:WP_002209722.1;Name=WP_002209722.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002209722.1;transl_table=11 NC_014029.1 RefSeq gene 3285576 3286613 . + . ID=gene3035;Name=YPZ3_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15205;old_locus_tag=YPZ3_2544 NC_014029.1 Protein Homology CDS 3285576 3286613 . + 0 ID=cds2990;Parent=gene3035;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11 NC_014029.1 RefSeq gene 3286955 3287485 . - . ID=gene3036;Name=YPZ3_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15210;old_locus_tag=YPZ3_2545 NC_014029.1 Protein Homology CDS 3286955 3287485 . - 0 ID=cds2991;Parent=gene3036;Dbxref=Genbank:WP_002209720.1;Name=WP_002209720.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_002209720.1;transl_table=11 NC_014029.1 RefSeq gene 3288276 3288968 . + . ID=gene3037;Name=YPZ3_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15215;old_locus_tag=YPZ3_2546 NC_014029.1 Protein Homology CDS 3288276 3288968 . + 0 ID=cds2992;Parent=gene3037;Dbxref=Genbank:WP_002209718.1;Name=WP_002209718.1;gbkey=CDS;product=racemase;protein_id=WP_002209718.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3289141 3289311 . + . ID=id240;gbkey=repeat_region NC_014029.1 RefSeq gene 3289376 3290599 . - . ID=gene3038;Name=YPZ3_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15220;old_locus_tag=YPZ3_2547 NC_014029.1 Protein Homology CDS 3289376 3290599 . - 0 ID=cds2993;Parent=gene3038;Dbxref=Genbank:WP_002209717.1;Name=WP_002209717.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002209717.1;transl_table=11 NC_014029.1 RefSeq gene 3290771 3292840 . + . ID=gene3039;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=YPZ3_RS15225;old_locus_tag=YPZ3_2548 NC_014029.1 Protein Homology CDS 3290771 3292840 . + 0 ID=cds2994;Parent=gene3039;Dbxref=Genbank:WP_002209716.1;Name=WP_002209716.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_002209716.1;transl_table=11 NC_014029.1 RefSeq gene 3293018 3293296 . - . ID=gene3040;Name=YPZ3_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15230 NC_014029.1 Protein Homology CDS 3293018 3293296 . - 0 ID=cds2995;Parent=gene3040;Dbxref=Genbank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209715.1;transl_table=11 NC_014029.1 RefSeq gene 3293354 3293896 . - . ID=gene3041;Name=YPZ3_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15235;old_locus_tag=YPZ3_2549 NC_014029.1 Protein Homology CDS 3293354 3293896 . - 0 ID=cds2996;Parent=gene3041;Dbxref=Genbank:WP_002209714.1;Name=WP_002209714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209714.1;transl_table=11 NC_014029.1 RefSeq gene 3293996 3294802 . - . ID=gene3042;Name=YPZ3_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15240;old_locus_tag=YPZ3_2550 NC_014029.1 Protein Homology CDS 3293996 3294802 . - 0 ID=cds2997;Parent=gene3042;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11 NC_014029.1 RefSeq gene 3294806 3295633 . - . ID=gene3043;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YPZ3_RS15245;old_locus_tag=YPZ3_2551 NC_014029.1 Protein Homology CDS 3294806 3295633 . - 0 ID=cds2998;Parent=gene3043;Dbxref=Genbank:WP_002225365.1;Name=WP_002225365.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11 NC_014029.1 RefSeq gene 3295639 3296724 . - . ID=gene3044;Name=YPZ3_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15250;old_locus_tag=YPZ3_2552 NC_014029.1 Protein Homology CDS 3295639 3296724 . - 0 ID=cds2999;Parent=gene3044;Dbxref=Genbank:WP_002209711.1;Name=WP_002209711.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NC_014029.1 RefSeq gene 3296801 3297733 . - . ID=gene3045;Name=YPZ3_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15255;old_locus_tag=YPZ3_2553 NC_014029.1 Protein Homology CDS 3296801 3297733 . - 0 ID=cds3000;Parent=gene3045;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NC_014029.1 RefSeq gene 3298103 3298633 . + . ID=gene3046;Name=YPZ3_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15260;old_locus_tag=YPZ3_2554 NC_014029.1 Protein Homology CDS 3298103 3298633 . + 0 ID=cds3001;Parent=gene3046;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11 NC_014029.1 RefSeq gene 3299011 3299502 . - . ID=gene3047;Name=YPZ3_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15265;old_locus_tag=YPZ3_2555 NC_014029.1 Protein Homology CDS 3299011 3299502 . - 0 ID=cds3002;Parent=gene3047;Dbxref=Genbank:WP_002209707.1;Name=WP_002209707.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_002209707.1;transl_table=11 NC_014029.1 RefSeq gene 3300071 3302395 . - . ID=gene3048;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS15270;old_locus_tag=YPZ3_2556 NC_014029.1 Protein Homology CDS 3300071 3302395 . - 0 ID=cds3003;Parent=gene3048;Dbxref=Genbank:WP_002209705.1;Name=WP_002209705.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002209705.1;transl_table=11 NC_014029.1 RefSeq gene 3302395 3303705 . - . ID=gene3049;Name=YPZ3_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15275;old_locus_tag=YPZ3_2557 NC_014029.1 Protein Homology CDS 3302395 3303705 . - 0 ID=cds3004;Parent=gene3049;Dbxref=Genbank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_002209704.1;transl_table=11 NC_014029.1 RefSeq gene 3303992 3304276 . - . ID=gene3050;Name=YPZ3_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15280 NC_014029.1 Protein Homology CDS 3303992 3304276 . - 0 ID=cds3005;Parent=gene3050;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11 NC_014029.1 RefSeq gene 3304702 3305967 . + . ID=gene3051;Name=YPZ3_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15285;old_locus_tag=YPZ3_2558 NC_014029.1 Protein Homology CDS 3304702 3305967 . + 0 ID=cds3006;Parent=gene3051;Dbxref=Genbank:WP_002209702.1;Name=WP_002209702.1;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=WP_002209702.1;transl_table=11 NC_014029.1 RefSeq gene 3306074 3306838 . - . ID=gene3052;Name=YPZ3_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15290;old_locus_tag=YPZ3_2559 NC_014029.1 Protein Homology CDS 3306074 3306838 . - 0 ID=cds3007;Parent=gene3052;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11 NC_014029.1 RefSeq gene 3306874 3308100 . - . ID=gene3053;Name=YPZ3_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15295;old_locus_tag=YPZ3_2560 NC_014029.1 Protein Homology CDS 3306874 3308100 . - 0 ID=cds3008;Parent=gene3053;Dbxref=Genbank:WP_002209700.1;Name=WP_002209700.1;gbkey=CDS;product=cytochrome C;protein_id=WP_002209700.1;transl_table=11 NC_014029.1 RefSeq gene 3308100 3308612 . - . ID=gene3054;Name=YPZ3_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15300;old_locus_tag=YPZ3_2561 NC_014029.1 Protein Homology CDS 3308100 3308612 . - 0 ID=cds3009;Parent=gene3054;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NC_014029.1 RefSeq gene 3308609 3309175 . - . ID=gene3055;Name=YPZ3_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15305;old_locus_tag=YPZ3_2562 NC_014029.1 Protein Homology CDS 3308609 3309175 . - 0 ID=cds3010;Parent=gene3055;Dbxref=Genbank:WP_002209699.1;Name=WP_002209699.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=WP_002209699.1;transl_table=11 NC_014029.1 RefSeq gene 3309172 3311142 . - . ID=gene3056;Name=YPZ3_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15310;old_locus_tag=YPZ3_2563 NC_014029.1 Protein Homology CDS 3309172 3311142 . - 0 ID=cds3011;Parent=gene3056;Dbxref=Genbank:WP_002209698.1;Name=WP_002209698.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=heme lyase subunit CcmF;protein_id=WP_002209698.1;transl_table=11 NC_014029.1 RefSeq gene 3311139 3311633 . - . ID=gene3057;Name=YPZ3_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15315;old_locus_tag=YPZ3_2564 NC_014029.1 Protein Homology CDS 3311139 3311633 . - 0 ID=cds3012;Parent=gene3057;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11 NC_014029.1 RefSeq gene 3311630 3311932 . - . ID=gene3058;Name=YPZ3_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15320;old_locus_tag=YPZ3_2565 NC_014029.1 Protein Homology CDS 3311630 3311932 . - 0 ID=cds3013;Parent=gene3058;Dbxref=Genbank:WP_002209696.1;Name=WP_002209696.1;gbkey=CDS;product=heme exporter protein D;protein_id=WP_002209696.1;transl_table=11 NC_014029.1 RefSeq gene 3311929 3312666 . - . ID=gene3059;Name=YPZ3_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15325;old_locus_tag=YPZ3_2566 NC_014029.1 Protein Homology CDS 3311929 3312666 . - 0 ID=cds3014;Parent=gene3059;Dbxref=Genbank:WP_002209695.1;Name=WP_002209695.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_002209695.1;transl_table=11 NC_014029.1 RefSeq gene 3312729 3313388 . - . ID=gene3060;Name=YPZ3_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15330;old_locus_tag=YPZ3_2567 NC_014029.1 Protein Homology CDS 3312729 3313388 . - 0 ID=cds3015;Parent=gene3060;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11 NC_014029.1 RefSeq gene 3313358 3314014 . - . ID=gene3061;Name=YPZ3_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15335;old_locus_tag=YPZ3_2568 NC_014029.1 Protein Homology CDS 3313358 3314014 . - 0 ID=cds3016;Parent=gene3061;Dbxref=Genbank:WP_002209693.1;Name=WP_002209693.1;gbkey=CDS;product=cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=WP_002209693.1;transl_table=11 NC_014029.1 RefSeq gene 3314459 3314926 . - . ID=gene3062;Name=YPZ3_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15340;old_locus_tag=YPZ3_2569 NC_014029.1 Protein Homology CDS 3314459 3314926 . - 0 ID=cds3017;Parent=gene3062;Dbxref=Genbank:WP_002209692.1;Name=WP_002209692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209692.1;transl_table=11 NC_014029.1 RefSeq gene 3315181 3315255 . - . ID=gene3063;Name=YPZ3_RS15345;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS15345;old_locus_tag=YPZ3_t37 NC_014029.1 tRNAscan-SE tRNA 3315181 3315255 . - . ID=rna42;Parent=gene3063;anticodon=(pos:complement(3315220..3315222));gbkey=tRNA;product=tRNA-Arg NC_014029.1 tRNAscan-SE exon 3315181 3315255 . - . ID=id241;Parent=rna42;anticodon=(pos:complement(3315220..3315222));gbkey=tRNA;product=tRNA-Arg NC_014029.1 RefSeq gene 3315542 3316084 . + . ID=gene3064;Name=YPZ3_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15350;old_locus_tag=YPZ3_2570 NC_014029.1 Protein Homology CDS 3315542 3316084 . + 0 ID=cds3018;Parent=gene3064;Dbxref=Genbank:WP_002209691.1;Name=WP_002209691.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209691.1;transl_table=11 NC_014029.1 RefSeq gene 3316089 3318128 . + . ID=gene3065;Name=YPZ3_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15355;old_locus_tag=YPZ3_2571 NC_014029.1 Protein Homology CDS 3316089 3318128 . + 0 ID=cds3019;Parent=gene3065;Dbxref=Genbank:WP_002209690.1;Name=WP_002209690.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209690.1;transl_table=11 NC_014029.1 RefSeq gene 3318504 3318845 . + . ID=gene3066;Name=YPZ3_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15360;old_locus_tag=YPZ3_2572 NC_014029.1 Protein Homology CDS 3318504 3318845 . + 0 ID=cds3020;Parent=gene3066;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11 NC_014029.1 RefSeq gene 3318920 3319267 . - . ID=gene3067;Name=YPZ3_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15365;old_locus_tag=YPZ3_2573 NC_014029.1 Protein Homology CDS 3318920 3319267 . - 0 ID=cds3021;Parent=gene3067;Dbxref=Genbank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209687.1;transl_table=11 NC_014029.1 RefSeq gene 3319292 3319771 . - . ID=gene3068;Name=YPZ3_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15370;old_locus_tag=YPZ3_2574 NC_014029.1 Protein Homology CDS 3319292 3319771 . - 0 ID=cds3022;Parent=gene3068;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11 NC_014029.1 RefSeq gene 3319868 3320674 . - . ID=gene3069;Name=YPZ3_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15375;old_locus_tag=YPZ3_2575 NC_014029.1 Protein Homology CDS 3319868 3320674 . - 0 ID=cds3023;Parent=gene3069;Dbxref=Genbank:WP_002209685.1;Name=WP_002209685.1;gbkey=CDS;product=ImpE family protein;protein_id=WP_002209685.1;transl_table=11 NC_014029.1 RefSeq gene 3320694 3321536 . - . ID=gene3070;Name=YPZ3_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15380;old_locus_tag=YPZ3_2576 NC_014029.1 Protein Homology CDS 3320694 3321536 . - 0 ID=cds3024;Parent=gene3070;Dbxref=Genbank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354537.1;transl_table=11 NC_014029.1 RefSeq gene 3321542 3321802 . - . ID=gene3071;Name=YPZ3_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15385 NC_014029.1 Protein Homology CDS 3321542 3321802 . - 0 ID=cds3025;Parent=gene3071;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11 NC_014029.1 RefSeq gene 3321901 3324507 . - . ID=gene3072;Name=YPZ3_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15390;old_locus_tag=YPZ3_2577 NC_014029.1 Protein Homology CDS 3321901 3324507 . - 0 ID=cds3026;Parent=gene3072;Dbxref=Genbank:WP_013060340.1;Name=WP_013060340.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_013060340.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3321947 3322294 . + . ID=id242;gbkey=repeat_region NC_014029.1 RefSeq gene 3324834 3328661 . - . ID=gene3073;Name=YPZ3_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15395;old_locus_tag=YPZ3_2578 NC_014029.1 Protein Homology CDS 3324834 3328661 . - 0 ID=cds3027;Parent=gene3073;Dbxref=Genbank:WP_002214843.1;Name=WP_002214843.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002214843.1;transl_table=11 NC_014029.1 RefSeq gene 3328670 3329506 . - . ID=gene3074;Name=YPZ3_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15400 NC_014029.1 Protein Homology CDS 3328670 3329506 . - 0 ID=cds3028;Parent=gene3074;Dbxref=Genbank:WP_002209681.1;Name=WP_002209681.1;gbkey=CDS;product=polymerase;protein_id=WP_002209681.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3329447 3331413 . + . ID=id243;gbkey=repeat_region NC_014029.1 RefSeq gene 3329522 3330301 . - . ID=gene3075;Name=YPZ3_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15405;old_locus_tag=YPZ3_2580 NC_014029.1 Protein Homology CDS 3329522 3330301 . - 0 ID=cds3029;Parent=gene3075;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 3330301 3331323 . - . ID=gene3076;Name=YPZ3_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15410;old_locus_tag=YPZ3_2581 NC_014029.1 Protein Homology CDS 3330301 3331323 . - 0 ID=cds3030;Parent=gene3076;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 3331337 3332005 . - . ID=gene3077;Name=YPZ3_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15415;old_locus_tag=YPZ3_2582 NC_014029.1 Protein Homology CDS 3331337 3332005 . - 0 ID=cds3031;Parent=gene3077;Dbxref=Genbank:WP_002215165.1;Name=WP_002215165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215165.1;transl_table=11 NC_014029.1 RefSeq gene 3332002 3333351 . - . ID=gene3078;Name=YPZ3_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15420;old_locus_tag=YPZ3_2583 NC_014029.1 Protein Homology CDS 3332002 3333351 . - 0 ID=cds3032;Parent=gene3078;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11 NC_014029.1 RefSeq gene 3333355 3333894 . - . ID=gene3079;Name=YPZ3_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15425;old_locus_tag=YPZ3_2584 NC_014029.1 Protein Homology CDS 3333355 3333894 . - 0 ID=cds3033;Parent=gene3079;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11 NC_014029.1 RefSeq gene 3334168 3334653 . - . ID=gene3080;Name=YPZ3_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15430;old_locus_tag=YPZ3_2585 NC_014029.1 Protein Homology CDS 3334168 3334653 . - 0 ID=cds3034;Parent=gene3080;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NC_014029.1 RefSeq gene 3334979 3336481 . - . ID=gene3081;Name=YPZ3_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15435;old_locus_tag=YPZ3_2586 NC_014029.1 Protein Homology CDS 3334979 3336481 . - 0 ID=cds3035;Parent=gene3081;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11 NC_014029.1 RefSeq gene 3336505 3337029 . - . ID=gene3082;Name=YPZ3_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15440;old_locus_tag=YPZ3_2587 NC_014029.1 Protein Homology CDS 3336505 3337029 . - 0 ID=cds3036;Parent=gene3082;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11 NC_014029.1 RefSeq gene 3337134 3337742 . - . ID=gene3083;Name=YPZ3_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15445;old_locus_tag=YPZ3_2588 NC_014029.1 Protein Homology CDS 3337134 3337742 . - 0 ID=cds3037;Parent=gene3083;Dbxref=Genbank:WP_002211576.1;Name=WP_002211576.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211576.1;transl_table=11 NC_014029.1 RefSeq gene 3337727 3338917 . - . ID=gene3084;Name=YPZ3_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15450;old_locus_tag=YPZ3_2589 NC_014029.1 Protein Homology CDS 3337727 3338917 . - 0 ID=cds3038;Parent=gene3084;Dbxref=Genbank:WP_002211577.1;Name=WP_002211577.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002211577.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3338869 3340189 . + . ID=id244;gbkey=repeat_region NC_014029.1 RefSeq gene 3338942 3340150 . + . ID=gene3085;Name=YPZ3_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15455;old_locus_tag=YPZ3_2590 NC_014029.1 Protein Homology CDS 3338942 3340150 . + 0 ID=cds3039;Parent=gene3085;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 3340172 3341722 . - . ID=gene3086;Name=YPZ3_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15460;old_locus_tag=YPZ3_2591 NC_014029.1 Protein Homology CDS 3340172 3341722 . - 0 ID=cds3040;Parent=gene3086;Dbxref=Genbank:WP_002215157.1;Name=WP_002215157.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002215157.1;transl_table=11 NC_014029.1 RefSeq gene 3341850 3342611 . - . ID=gene3087;Name=YPZ3_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15465;old_locus_tag=YPZ3_2592 NC_014029.1 Protein Homology CDS 3341850 3342611 . - 0 ID=cds3041;Parent=gene3087;Dbxref=Genbank:WP_002211579.1;Name=WP_002211579.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211579.1;transl_table=11 NC_014029.1 RefSeq gene 3342768 3343313 . - . ID=gene3088;Name=YPZ3_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15470;old_locus_tag=YPZ3_2593 NC_014029.1 Protein Homology CDS 3342768 3343313 . - 0 ID=cds3042;Parent=gene3088;Dbxref=Genbank:WP_002211580.1;Name=WP_002211580.1;gbkey=CDS;product=frimbrial protein;protein_id=WP_002211580.1;transl_table=11 NC_014029.1 RefSeq gene 3343514 3346189 . - . ID=gene3089;Name=YPZ3_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15475;old_locus_tag=YPZ3_2594 NC_014029.1 Protein Homology CDS 3343514 3346189 . - 0 ID=cds3043;Parent=gene3089;Dbxref=Genbank:WP_002215317.1;Name=WP_002215317.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_002215317.1;transl_table=11 NC_014029.1 RefSeq gene 3346972 3348852 . + . ID=gene3090;Name=YPZ3_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15480;old_locus_tag=YPZ3_2595 NC_014029.1 Protein Homology CDS 3346972 3348852 . + 0 ID=cds3044;Parent=gene3090;Dbxref=Genbank:WP_002211582.1;Name=WP_002211582.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211582.1;transl_table=11 NC_014029.1 RefSeq gene 3348852 3349877 . + . ID=gene3091;Name=YPZ3_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15485;old_locus_tag=YPZ3_2596 NC_014029.1 Protein Homology CDS 3348852 3349877 . + 0 ID=cds3045;Parent=gene3091;Dbxref=Genbank:WP_002211583.1;Name=WP_002211583.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211583.1;transl_table=11 NC_014029.1 RefSeq gene 3349976 3351157 . + . ID=gene3092;Name=YPZ3_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15490;old_locus_tag=YPZ3_2597 NC_014029.1 Protein Homology CDS 3349976 3351157 . + 0 ID=cds3046;Parent=gene3092;Dbxref=Genbank:WP_002211584.1;Name=WP_002211584.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211584.1;transl_table=11 NC_014029.1 RefSeq gene 3351164 3352195 . + . ID=gene3093;Name=YPZ3_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15495;old_locus_tag=YPZ3_2598 NC_014029.1 Protein Homology CDS 3351164 3352195 . + 0 ID=cds3047;Parent=gene3093;Dbxref=Genbank:WP_002215319.1;Name=WP_002215319.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215319.1;transl_table=11 NC_014029.1 RefSeq gene 3352235 3353572 . + . ID=gene3094;Name=YPZ3_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15500;old_locus_tag=YPZ3_2599 NC_014029.1 Protein Homology CDS 3352235 3353572 . + 0 ID=cds3048;Parent=gene3094;Dbxref=Genbank:WP_002211586.1;Name=WP_002211586.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002211586.1;transl_table=11 NC_014029.1 RefSeq gene 3353569 3354252 . + . ID=gene3095;Name=YPZ3_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15505;old_locus_tag=YPZ3_2600 NC_014029.1 Protein Homology CDS 3353569 3354252 . + 0 ID=cds3049;Parent=gene3095;Dbxref=Genbank:WP_002211587.1;Name=WP_002211587.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211587.1;transl_table=11 NC_014029.1 RefSeq gene 3354253 3355935 . + . ID=gene3096;Name=YPZ3_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15510;old_locus_tag=YPZ3_2601 NC_014029.1 Protein Homology CDS 3354253 3355935 . + 0 ID=cds3050;Parent=gene3096;Dbxref=Genbank:WP_002211588.1;Name=WP_002211588.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211588.1;transl_table=11 NC_014029.1 RefSeq gene 3355932 3356414 . + . ID=gene3097;Name=YPZ3_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15515;old_locus_tag=YPZ3_2602 NC_014029.1 Protein Homology CDS 3355932 3356414 . + 0 ID=cds3051;Parent=gene3097;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11 NC_014029.1 RefSeq gene 3356772 3357374 . - . ID=gene3098;Name=YPZ3_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15520;old_locus_tag=YPZ3_2603 NC_014029.1 Protein Homology CDS 3356772 3357374 . - 0 ID=cds3052;Parent=gene3098;Dbxref=Genbank:WP_002211590.1;Name=WP_002211590.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211590.1;transl_table=11 NC_014029.1 RefSeq gene 3358629 3359723 . - . ID=gene3099;Name=YPZ3_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15525;old_locus_tag=YPZ3_2604 NC_014029.1 Protein Homology CDS 3358629 3359723 . - 0 ID=cds3053;Parent=gene3099;Dbxref=Genbank:WP_002211594.1;Name=WP_002211594.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_002211594.1;transl_table=11 NC_014029.1 RefSeq gene 3360052 3361071 . + . ID=gene3100;Name=YPZ3_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15530;old_locus_tag=YPZ3_2605 NC_014029.1 Protein Homology CDS 3360052 3361071 . + 0 ID=cds3054;Parent=gene3100;Dbxref=Genbank:WP_002211596.1;Name=WP_002211596.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211596.1;transl_table=11 NC_014029.1 RefSeq gene 3361127 3362713 . + . ID=gene3101;Name=YPZ3_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15535;old_locus_tag=YPZ3_2606 NC_014029.1 Protein Homology CDS 3361127 3362713 . + 0 ID=cds3055;Parent=gene3101;Dbxref=Genbank:WP_002215840.1;Name=WP_002215840.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002215840.1;transl_table=11 NC_014029.1 RefSeq gene 3362710 3363759 . + . ID=gene3102;Name=YPZ3_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15540;old_locus_tag=YPZ3_2607 NC_014029.1 Protein Homology CDS 3362710 3363759 . + 0 ID=cds3056;Parent=gene3102;Dbxref=Genbank:WP_002211598.1;Name=WP_002211598.1;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_002211598.1;transl_table=11 NC_014029.1 RefSeq gene 3363832 3364356 . - . ID=gene3103;Name=YPZ3_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15545;old_locus_tag=YPZ3_2608 NC_014029.1 Protein Homology CDS 3363832 3364356 . - 0 ID=cds3057;Parent=gene3103;Dbxref=Genbank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211599.1;transl_table=11 NC_014029.1 RefSeq gene 3364823 3365302 . + . ID=gene3104;Name=YPZ3_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15550 NC_014029.1 Protein Homology CDS 3364823 3365302 . + 0 ID=cds3058;Parent=gene3104;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11 NC_014029.1 RefSeq gene 3365532 3366380 . - . ID=gene3105;Name=YPZ3_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15555;old_locus_tag=YPZ3_2609 NC_014029.1 Protein Homology CDS 3365532 3366380 . - 0 ID=cds3059;Parent=gene3105;Dbxref=Genbank:WP_002211601.1;Name=WP_002211601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211601.1;transl_table=11 NC_014029.1 RefSeq gene 3367211 3369637 . + . ID=gene3106;Name=YPZ3_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15560;old_locus_tag=YPZ3_2610 NC_014029.1 Protein Homology CDS 3367211 3369637 . + 0 ID=cds3060;Parent=gene3106;Dbxref=Genbank:WP_002211602.1;Name=WP_002211602.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002211602.1;transl_table=11 NC_014029.1 RefSeq gene 3369649 3370266 . + . ID=gene3107;Name=YPZ3_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15565;old_locus_tag=YPZ3_2611 NC_014029.1 Protein Homology CDS 3369649 3370266 . + 0 ID=cds3061;Parent=gene3107;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11 NC_014029.1 RefSeq gene 3370268 3371044 . + . ID=gene3108;Name=YPZ3_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15570;old_locus_tag=YPZ3_2612 NC_014029.1 Protein Homology CDS 3370268 3371044 . + 0 ID=cds3062;Parent=gene3108;Dbxref=Genbank:WP_002211604.1;Name=WP_002211604.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211604.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3371150 3371500 . + . ID=id245;gbkey=repeat_region NC_014029.1 RefSeq gene 3371526 3372122 . + . ID=gene3109;Name=YPZ3_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15575;old_locus_tag=YPZ3_2613 NC_014029.1 Protein Homology CDS 3371526 3372122 . + 0 ID=cds3063;Parent=gene3109;Dbxref=Genbank:WP_002228419.1;Name=WP_002228419.1;gbkey=CDS;product=nitrate reductase subunit delta;protein_id=WP_002228419.1;transl_table=11 NC_014029.1 RefSeq gene 3372119 3372688 . + . ID=gene3110;Name=YPZ3_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15580;old_locus_tag=YPZ3_2614 NC_014029.1 Protein Homology CDS 3372119 3372688 . + 0 ID=cds3064;Parent=gene3110;Dbxref=Genbank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_002211606.1;transl_table=11 NC_014029.1 RefSeq gene 3372934 3373590 . - . ID=gene3111;Name=YPZ3_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15585;old_locus_tag=YPZ3_2615 NC_014029.1 Protein Homology CDS 3372934 3373590 . - 0 ID=cds3065;Parent=gene3111;Dbxref=Genbank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211607.1;transl_table=11 NC_014029.1 RefSeq gene 3373587 3373943 . - . ID=gene3112;Name=YPZ3_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15590;old_locus_tag=YPZ3_2616 NC_014029.1 Protein Homology CDS 3373587 3373943 . - 0 ID=cds3066;Parent=gene3112;Dbxref=Genbank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215846.1;transl_table=11 NC_014029.1 RefSeq gene 3373970 3374641 . - . ID=gene3113;Name=YPZ3_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15595;old_locus_tag=YPZ3_2617 NC_014029.1 Protein Homology CDS 3373970 3374641 . - 0 ID=cds3067;Parent=gene3113;Dbxref=Genbank:WP_002215847.1;Name=WP_002215847.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215847.1;transl_table=11 NC_014029.1 RefSeq gene 3375231 3375662 . + . ID=gene3114;Name=YPZ3_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15600;old_locus_tag=YPZ3_2618 NC_014029.1 Protein Homology CDS 3375231 3375662 . + 0 ID=cds3068;Parent=gene3114;Dbxref=Genbank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_002211610.1;transl_table=11 NC_014029.1 RefSeq gene 3375757 3376281 . - . ID=gene3115;Name=YPZ3_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15605;old_locus_tag=YPZ3_2619 NC_014029.1 Protein Homology CDS 3375757 3376281 . - 0 ID=cds3069;Parent=gene3115;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11 NC_014029.1 RefSeq gene 3376545 3377780 . - . ID=gene3116;Name=YPZ3_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15610;old_locus_tag=YPZ3_2620 NC_014029.1 Protein Homology CDS 3376545 3377780 . - 0 ID=cds3070;Parent=gene3116;Dbxref=Genbank:WP_002211613.1;Name=WP_002211613.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002211613.1;transl_table=11 NC_014029.1 RefSeq gene 3378046 3379293 . + . ID=gene3117;Name=YPZ3_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15615;old_locus_tag=YPZ3_2621 NC_014029.1 Protein Homology CDS 3378046 3379293 . + 0 ID=cds3071;Parent=gene3117;Dbxref=Genbank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211614.1;transl_table=11 NC_014029.1 RefSeq gene 3379371 3380342 . - . ID=gene3118;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YPZ3_RS15620;old_locus_tag=YPZ3_2622 NC_014029.1 Protein Homology CDS 3379371 3380342 . - 0 ID=cds3072;Parent=gene3118;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NC_014029.1 RefSeq gene 3380523 3380999 . - . ID=gene3119;Name=YPZ3_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15625;old_locus_tag=YPZ3_2623 NC_014029.1 Protein Homology CDS 3380523 3380999 . - 0 ID=cds3073;Parent=gene3119;Dbxref=Genbank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002211616.1;transl_table=11 NC_014029.1 RefSeq gene 3381102 3381980 . + . ID=gene3120;Name=YPZ3_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15630;old_locus_tag=YPZ3_2624 NC_014029.1 Protein Homology CDS 3381102 3381980 . + 0 ID=cds3074;Parent=gene3120;Dbxref=Genbank:WP_002211617.1;Name=WP_002211617.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211617.1;transl_table=11 NC_014029.1 RefSeq gene 3382116 3383105 . + . ID=gene3121;Name=YPZ3_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15635;old_locus_tag=YPZ3_2625 NC_014029.1 Protein Homology CDS 3382116 3383105 . + 0 ID=cds3075;Parent=gene3121;Dbxref=Genbank:WP_002211618.1;Name=WP_002211618.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_002211618.1;transl_table=11 NC_014029.1 RefSeq gene 3383375 3383689 . + . ID=gene3122;Name=YPZ3_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15640 NC_014029.1 Protein Homology CDS 3383375 3383689 . + 0 ID=cds3076;Parent=gene3122;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11 NC_014029.1 RefSeq gene 3383782 3385011 . - . ID=gene3123;Name=YPZ3_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15645;old_locus_tag=YPZ3_2627 NC_014029.1 Protein Homology CDS 3383782 3385011 . - 0 ID=cds3077;Parent=gene3123;Dbxref=Genbank:WP_002211621.1;Name=WP_002211621.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_002211621.1;transl_table=11 NC_014029.1 RefSeq gene 3385462 3386646 . + . ID=gene3124;Name=YPZ3_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15650;old_locus_tag=YPZ3_2628 NC_014029.1 Protein Homology CDS 3385462 3386646 . + 0 ID=cds3078;Parent=gene3124;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11 NC_014029.1 RefSeq gene 3387023 3387098 . - . ID=gene3125;Name=YPZ3_RS15655;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS15655;old_locus_tag=YPZ3_t38 NC_014029.1 tRNAscan-SE tRNA 3387023 3387098 . - . ID=rna43;Parent=gene3125;anticodon=(pos:complement(3387063..3387065));gbkey=tRNA;product=tRNA-Lys NC_014029.1 tRNAscan-SE exon 3387023 3387098 . - . ID=id246;Parent=rna43;anticodon=(pos:complement(3387063..3387065));gbkey=tRNA;product=tRNA-Lys NC_014029.1 RefSeq gene 3387298 3387373 . - . ID=gene3126;Name=YPZ3_RS15660;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS15660;old_locus_tag=YPZ3_t39 NC_014029.1 tRNAscan-SE tRNA 3387298 3387373 . - . ID=rna44;Parent=gene3126;anticodon=(pos:complement(3387338..3387340));gbkey=tRNA;product=tRNA-Val NC_014029.1 tRNAscan-SE exon 3387298 3387373 . - . ID=id247;Parent=rna44;anticodon=(pos:complement(3387338..3387340));gbkey=tRNA;product=tRNA-Val NC_014029.1 RefSeq gene 3387418 3387493 . - . ID=gene3127;Name=YPZ3_RS15665;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS15665;old_locus_tag=YPZ3_t40 NC_014029.1 tRNAscan-SE tRNA 3387418 3387493 . - . ID=rna45;Parent=gene3127;anticodon=(pos:complement(3387458..3387460));gbkey=tRNA;product=tRNA-Val NC_014029.1 tRNAscan-SE exon 3387418 3387493 . - . ID=id248;Parent=rna45;anticodon=(pos:complement(3387458..3387460));gbkey=tRNA;product=tRNA-Val NC_014029.1 RefSeq gene 3387530 3387605 . - . ID=gene3128;Name=YPZ3_RS15670;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS15670;old_locus_tag=YPZ3_t41 NC_014029.1 tRNAscan-SE tRNA 3387530 3387605 . - . ID=rna46;Parent=gene3128;anticodon=(pos:complement(3387570..3387572));gbkey=tRNA;product=tRNA-Val NC_014029.1 tRNAscan-SE exon 3387530 3387605 . - . ID=id249;Parent=rna46;anticodon=(pos:complement(3387570..3387572));gbkey=tRNA;product=tRNA-Val NC_014029.1 RefSeq gene 3387880 3389295 . + . ID=gene3129;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YPZ3_RS15675;old_locus_tag=YPZ3_2629 NC_014029.1 Protein Homology CDS 3387880 3389295 . + 0 ID=cds3079;Parent=gene3129;Dbxref=Genbank:WP_002222185.1;Name=WP_002222185.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_002222185.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3389332 3390056 . + . ID=id250;gbkey=repeat_region NC_014029.1 RefSeq gene 3389488 3389946 . + . ID=gene3130;Name=YPZ3_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15680;old_locus_tag=YPZ3_2630 NC_014029.1 Protein Homology CDS 3389488 3389946 . + 0 ID=cds3080;Parent=gene3130;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 3390237 3390312 . + . ID=gene3131;Name=YPZ3_RS15685;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS15685;old_locus_tag=YPZ3_t42 NC_014029.1 tRNAscan-SE tRNA 3390237 3390312 . + . ID=rna47;Parent=gene3131;anticodon=(pos:3390270..3390272);gbkey=tRNA;product=tRNA-Ala NC_014029.1 tRNAscan-SE exon 3390237 3390312 . + . ID=id251;Parent=rna47;anticodon=(pos:3390270..3390272);gbkey=tRNA;product=tRNA-Ala NC_014029.1 RefSeq gene 3390390 3390465 . + . ID=gene3132;Name=YPZ3_RS15690;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS15690;old_locus_tag=YPZ3_t43 NC_014029.1 tRNAscan-SE tRNA 3390390 3390465 . + . ID=rna48;Parent=gene3132;anticodon=(pos:3390423..3390425);gbkey=tRNA;product=tRNA-Ala NC_014029.1 tRNAscan-SE exon 3390390 3390465 . + . ID=id252;Parent=rna48;anticodon=(pos:3390423..3390425);gbkey=tRNA;product=tRNA-Ala NC_014029.1 RefSeq gene 3390660 3391265 . + . ID=gene3133;Name=YPZ3_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15695;old_locus_tag=YPZ3_2631 NC_014029.1 Protein Homology CDS 3390660 3391265 . + 0 ID=cds3081;Parent=gene3133;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11 NC_014029.1 RefSeq gene 3391397 3391744 . + . ID=gene3134;Name=YPZ3_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15700;old_locus_tag=YPZ3_2632 NC_014029.1 Protein Homology CDS 3391397 3391744 . + 0 ID=cds3082;Parent=gene3134;Dbxref=Genbank:WP_002213372.1;Name=WP_002213372.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213372.1;transl_table=11 NC_014029.1 RefSeq gene 3391845 3392060 . - . ID=gene3135;Name=YPZ3_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15705 NC_014029.1 Protein Homology CDS 3391845 3392060 . - 0 ID=cds3083;Parent=gene3135;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11 NC_014029.1 RefSeq gene 3392080 3394092 . - . ID=gene3136;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YPZ3_RS15710;old_locus_tag=YPZ3_2633 NC_014029.1 Protein Homology CDS 3392080 3394092 . - 0 ID=cds3084;Parent=gene3136;Dbxref=Genbank:WP_002213368.1;Name=WP_002213368.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=WP_002213368.1;transl_table=11 NC_014029.1 RefSeq gene 3394183 3395169 . - . ID=gene3137;Name=YPZ3_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15715;old_locus_tag=YPZ3_2634 NC_014029.1 Protein Homology CDS 3394183 3395169 . - 0 ID=cds3085;Parent=gene3137;Dbxref=Genbank:WP_002227089.1;Name=WP_002227089.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_002227089.1;transl_table=11 NC_014029.1 RefSeq gene 3395418 3396152 . + . ID=gene3138;Name=YPZ3_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15720;old_locus_tag=YPZ3_2635 NC_014029.1 Protein Homology CDS 3395418 3396152 . + 0 ID=cds3086;Parent=gene3138;Dbxref=Genbank:WP_002213487.1;Name=WP_002213487.1;gbkey=CDS;product=cysteine biosynthesis protein CysZ;protein_id=WP_002213487.1;transl_table=11 NC_014029.1 RefSeq gene 3396309 3397277 . + . ID=gene3139;Name=YPZ3_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15725;old_locus_tag=YPZ3_2636 NC_014029.1 Protein Homology CDS 3396309 3397277 . + 0 ID=cds3087;Parent=gene3139;Dbxref=Genbank:WP_002222180.1;Name=WP_002222180.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11 NC_014029.1 RefSeq gene 3397776 3398033 . + . ID=gene3140;Name=YPZ3_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15730 NC_014029.1 Protein Homology CDS 3397776 3398033 . + 0 ID=cds3088;Parent=gene3140;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11 NC_014029.1 RefSeq gene 3398082 3399809 . + . ID=gene3141;Name=YPZ3_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15735;old_locus_tag=YPZ3_2637 NC_014029.1 Protein Homology CDS 3398082 3399809 . + 0 ID=cds3089;Parent=gene3141;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11 NC_014029.1 RefSeq gene 3399858 3400367 . + . ID=gene3142;Name=YPZ3_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15740;old_locus_tag=YPZ3_2638 NC_014029.1 Protein Homology CDS 3399858 3400367 . + 0 ID=cds3090;Parent=gene3142;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3400400 3401121 . + . ID=id253;gbkey=repeat_region NC_014029.1 RefSeq gene 3400510 3400968 . - . ID=gene3143;Name=YPZ3_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15745;old_locus_tag=YPZ3_2639 NC_014029.1 Protein Homology CDS 3400510 3400968 . - 0 ID=cds3091;Parent=gene3143;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 3400958 3401152 . - . ID=gene3144;Name=YPZ3_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15750 NC_014029.1 Protein Homology CDS 3400958 3401152 . - 0 ID=cds3092;Parent=gene3144;Dbxref=Genbank:WP_002430126.1;Name=WP_002430126.1;gbkey=CDS;product=invasin;protein_id=WP_002430126.1;transl_table=11 NC_014029.1 RefSeq gene 3401238 3402587 . - . ID=gene3145;Name=YPZ3_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15755;old_locus_tag=YPZ3_2640 NC_014029.1 Protein Homology CDS 3401238 3402587 . - 0 ID=cds3093;Parent=gene3145;Dbxref=Genbank:WP_002208493.1;Name=WP_002208493.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208493.1;transl_table=11 NC_014029.1 RefSeq gene 3402613 3403296 . - . ID=gene3146;Name=YPZ3_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15760;old_locus_tag=YPZ3_2641 NC_014029.1 Protein Homology CDS 3402613 3403296 . - 0 ID=cds3094;Parent=gene3146;Dbxref=Genbank:WP_002208494.1;Name=WP_002208494.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208494.1;transl_table=11 NC_014029.1 RefSeq gene 3403484 3404689 . + . ID=gene3147;Name=YPZ3_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15765;old_locus_tag=YPZ3_2642 NC_014029.1 Protein Homology CDS 3403484 3404689 . + 0 ID=cds3095;Parent=gene3147;Dbxref=Genbank:WP_002208495.1;Name=WP_002208495.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002208495.1;transl_table=11 NC_014029.1 RefSeq gene 3404693 3406729 . + . ID=gene3148;Name=YPZ3_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15770;old_locus_tag=YPZ3_2643 NC_014029.1 Protein Homology CDS 3404693 3406729 . + 0 ID=cds3096;Parent=gene3148;Dbxref=Genbank:WP_002208496.1;Name=WP_002208496.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002208496.1;transl_table=11 NC_014029.1 RefSeq gene 3406984 3408630 . - . ID=gene3149;Name=YPZ3_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15775;old_locus_tag=YPZ3_2644 NC_014029.1 Protein Homology CDS 3406984 3408630 . - 0 ID=cds3097;Parent=gene3149;Dbxref=Genbank:WP_002208497.1;Name=WP_002208497.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_002208497.1;transl_table=11 NC_014029.1 RefSeq gene 3408690 3410150 . - . ID=gene3150;Name=YPZ3_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15780;old_locus_tag=YPZ3_2645 NC_014029.1 Protein Homology CDS 3408690 3410150 . - 0 ID=cds3098;Parent=gene3150;Dbxref=Genbank:WP_002208498.1;Name=WP_002208498.1;gbkey=CDS;product=permease;protein_id=WP_002208498.1;transl_table=11 NC_014029.1 RefSeq gene 3410147 3410344 . - . ID=gene3151;Name=YPZ3_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15785 NC_014029.1 Protein Homology CDS 3410147 3410344 . - 0 ID=cds3099;Parent=gene3151;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11 NC_014029.1 RefSeq gene 3410487 3411494 . - . ID=gene3152;Name=YPZ3_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15790;old_locus_tag=YPZ3_2646 NC_014029.1 Protein Homology CDS 3410487 3411494 . - 0 ID=cds3100;Parent=gene3152;Dbxref=Genbank:WP_002228411.1;Name=WP_002228411.1;gbkey=CDS;product=peptidase M24;protein_id=WP_002228411.1;transl_table=11 NC_014029.1 RefSeq gene 3411515 3411706 . - . ID=gene3153;Name=YPZ3_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15795 NC_014029.1 Protein Homology CDS 3411515 3411706 . - 0 ID=cds3101;Parent=gene3153;Dbxref=Genbank:WP_002215018.1;Name=WP_002215018.1;gbkey=CDS;product=creatininase;protein_id=WP_002215018.1;transl_table=11 NC_014029.1 RefSeq gene 3411740 3412921 . - . ID=gene3154;Name=YPZ3_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15800;old_locus_tag=YPZ3_2647 NC_014029.1 Protein Homology CDS 3411740 3412921 . - 0 ID=cds3102;Parent=gene3154;Dbxref=Genbank:WP_002208500.1;Name=WP_002208500.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002208500.1;transl_table=11 NC_014029.1 RefSeq gene 3413629 3415047 . + . ID=gene3155;Name=YPZ3_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15805;old_locus_tag=YPZ3_2648 NC_014029.1 Protein Homology CDS 3413629 3415047 . + 0 ID=cds3103;Parent=gene3155;Dbxref=Genbank:WP_002208502.1;Name=WP_002208502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208502.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3415056 3415224 . + . ID=id254;gbkey=repeat_region NC_014029.1 RefSeq gene 3415280 3416824 . + . ID=gene3156;Name=YPZ3_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15810;old_locus_tag=YPZ3_2649 NC_014029.1 Protein Homology CDS 3415280 3416824 . + 0 ID=cds3104;Parent=gene3156;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NC_014029.1 RefSeq gene 3416821 3417528 . + . ID=gene3157;Name=YPZ3_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15815;old_locus_tag=YPZ3_2650 NC_014029.1 Protein Homology CDS 3416821 3417528 . + 0 ID=cds3105;Parent=gene3157;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11 NC_014029.1 RefSeq gene 3417909 3419141 . - . ID=gene3158;Name=YPZ3_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15820;old_locus_tag=YPZ3_2651 NC_014029.1 Protein Homology CDS 3417909 3419141 . - 0 ID=cds3106;Parent=gene3158;Dbxref=Genbank:WP_002208507.1;Name=WP_002208507.1;gbkey=CDS;product=type III secretion protein GogB;protein_id=WP_002208507.1;transl_table=11 NC_014029.1 RefSeq gene 3419386 3420264 . - . ID=gene3159;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YPZ3_RS15825;old_locus_tag=YPZ3_2652 NC_014029.1 Protein Homology CDS 3419386 3420264 . - 0 ID=cds3107;Parent=gene3159;Dbxref=Genbank:WP_002208508.1;Name=WP_002208508.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=WP_002208508.1;transl_table=11 NC_014029.1 RefSeq gene 3420435 3421526 . - . ID=gene3160;Name=YPZ3_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15830;old_locus_tag=YPZ3_2653 NC_014029.1 Protein Homology CDS 3420435 3421526 . - 0 ID=cds3108;Parent=gene3160;Dbxref=Genbank:WP_002208509.1;Name=WP_002208509.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_002208509.1;transl_table=11 NC_014029.1 RefSeq gene 3421516 3422391 . - . ID=gene3161;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YPZ3_RS15835;old_locus_tag=YPZ3_2654 NC_014029.1 Protein Homology CDS 3421516 3422391 . - 0 ID=cds3109;Parent=gene3161;Dbxref=Genbank:WP_002208510.1;Name=WP_002208510.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_002208510.1;transl_table=11 NC_014029.1 RefSeq gene 3422391 3423224 . - . ID=gene3162;Name=YPZ3_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15840;old_locus_tag=YPZ3_2655 NC_014029.1 Protein Homology CDS 3422391 3423224 . - 0 ID=cds3110;Parent=gene3162;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11 NC_014029.1 RefSeq gene 3423224 3424261 . - . ID=gene3163;Name=YPZ3_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15845;old_locus_tag=YPZ3_2656 NC_014029.1 Protein Homology CDS 3423224 3424261 . - 0 ID=cds3111;Parent=gene3163;Dbxref=Genbank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=WP_002208512.1;transl_table=11 NC_014029.1 RefSeq gene 3424576 3426108 . - . ID=gene3164;Name=YPZ3_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15850;old_locus_tag=YPZ3_2657 NC_014029.1 Protein Homology CDS 3424576 3426108 . - 0 ID=cds3112;Parent=gene3164;Dbxref=Genbank:WP_002208513.1;Name=WP_002208513.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002208513.1;transl_table=11 NC_014029.1 RefSeq gene 3426713 3427591 . - . ID=gene3165;Name=YPZ3_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15855;old_locus_tag=YPZ3_2658 NC_014029.1 Protein Homology CDS 3426713 3427591 . - 0 ID=cds3113;Parent=gene3165;Dbxref=Genbank:WP_002208514.1;Name=WP_002208514.1;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208514.1;transl_table=11 NC_014029.1 RefSeq gene 3427588 3427740 . - . ID=gene3166;Name=YPZ3_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15860 NC_014029.1 Protein Homology CDS 3427588 3427740 . - 0 ID=cds3114;Parent=gene3166;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11 NC_014029.1 RefSeq gene 3427780 3428250 . - . ID=gene3167;Name=YPZ3_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15865;old_locus_tag=YPZ3_2659 NC_014029.1 Protein Homology CDS 3427780 3428250 . - 0 ID=cds3115;Parent=gene3167;Dbxref=Genbank:WP_002208515.1;Name=WP_002208515.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_002208515.1;transl_table=11 NC_014029.1 RefSeq gene 3428332 3429204 . - . ID=gene3168;Name=YPZ3_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15870;old_locus_tag=YPZ3_2660 NC_014029.1 Protein Homology CDS 3428332 3429204 . - 0 ID=cds3116;Parent=gene3168;Dbxref=Genbank:WP_002208516.1;Name=WP_002208516.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208516.1;transl_table=11 NC_014029.1 RefSeq gene 3429473 3430039 . + . ID=gene3169;Name=YPZ3_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15875;old_locus_tag=YPZ3_2661 NC_014029.1 Protein Homology CDS 3429473 3430039 . + 0 ID=cds3117;Parent=gene3169;Dbxref=Genbank:WP_002229547.1;Name=WP_002229547.1;gbkey=CDS;product=membrane protein;protein_id=WP_002229547.1;transl_table=11 NC_014029.1 RefSeq gene 3430885 3431508 . + . ID=gene3170;Name=YPZ3_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15880;old_locus_tag=YPZ3_2663 NC_014029.1 Protein Homology CDS 3430885 3431508 . + 0 ID=cds3118;Parent=gene3170;Dbxref=Genbank:WP_002354634.1;Name=WP_002354634.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_002354634.1;transl_table=11 NC_014029.1 RefSeq gene 3431571 3432464 . + . ID=gene3171;Name=YPZ3_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15885;old_locus_tag=YPZ3_2664 NC_014029.1 Protein Homology CDS 3431571 3432464 . + 0 ID=cds3119;Parent=gene3171;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11 NC_014029.1 RefSeq gene 3432562 3433461 . - . ID=gene3172;Name=YPZ3_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15890;old_locus_tag=YPZ3_2665 NC_014029.1 Protein Homology CDS 3432562 3433461 . - 0 ID=cds3120;Parent=gene3172;Dbxref=Genbank:WP_002208519.1;Name=WP_002208519.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_002208519.1;transl_table=11 NC_014029.1 RefSeq gene 3433639 3434250 . - . ID=gene3173;Name=YPZ3_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15895;old_locus_tag=YPZ3_2666 NC_014029.1 Protein Homology CDS 3433639 3434250 . - 0 ID=cds3121;Parent=gene3173;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11 NC_014029.1 RefSeq gene 3434609 3435022 . + . ID=gene3174;Name=YPZ3_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15900;old_locus_tag=YPZ3_2667 NC_014029.1 Protein Homology CDS 3434609 3435022 . + 0 ID=cds3122;Parent=gene3174;Dbxref=Genbank:WP_002208522.1;Name=WP_002208522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208522.1;transl_table=11 NC_014029.1 RefSeq gene 3435509 3437788 . + . ID=gene3175;Name=YPZ3_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15905;old_locus_tag=YPZ3_2668 NC_014029.1 Protein Homology CDS 3435509 3437788 . + 0 ID=cds3123;Parent=gene3175;Dbxref=Genbank:WP_002208523.1;Name=WP_002208523.1;gbkey=CDS;product=autotransporter;protein_id=WP_002208523.1;transl_table=11 NC_014029.1 RefSeq gene 3437880 3438296 . - . ID=gene3176;Name=YPZ3_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15910;old_locus_tag=YPZ3_2669 NC_014029.1 Protein Homology CDS 3437880 3438296 . - 0 ID=cds3124;Parent=gene3176;Dbxref=Genbank:WP_002208524.1;Name=WP_002208524.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208524.1;transl_table=11 NC_014029.1 RefSeq gene 3438402 3438587 . + . ID=gene3177;Name=YPZ3_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15915 NC_014029.1 Protein Homology CDS 3438402 3438587 . + 0 ID=cds3125;Parent=gene3177;Dbxref=Genbank:WP_002216562.1;Name=WP_002216562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216562.1;transl_table=11 NC_014029.1 RefSeq gene 3438769 3439194 . - . ID=gene3178;Name=YPZ3_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15920;old_locus_tag=YPZ3_2670 NC_014029.1 Protein Homology CDS 3438769 3439194 . - 0 ID=cds3126;Parent=gene3178;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NC_014029.1 RefSeq gene 3439477 3440406 . + . ID=gene3179;Name=YPZ3_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15925;old_locus_tag=YPZ3_2671 NC_014029.1 Protein Homology CDS 3439477 3440406 . + 0 ID=cds3127;Parent=gene3179;Dbxref=Genbank:WP_002208526.1;Name=WP_002208526.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002208526.1;transl_table=11 NC_014029.1 RefSeq gene 3440406 3440864 . + . ID=gene3180;Name=YPZ3_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15930;old_locus_tag=YPZ3_2672 NC_014029.1 Protein Homology CDS 3440406 3440864 . + 0 ID=cds3128;Parent=gene3180;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11 NC_014029.1 RefSeq gene 3441015 3443300 . - . ID=gene3181;Name=YPZ3_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15935;old_locus_tag=YPZ3_2673 NC_014029.1 Protein Homology CDS 3441015 3443300 . - 0 ID=cds3129;Parent=gene3181;Dbxref=Genbank:WP_013060342.1;Name=WP_013060342.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=NADP-dependent malic enzyme;protein_id=WP_013060342.1;transl_table=11 NC_014029.1 RefSeq gene 3443496 3444092 . - . ID=gene3182;Name=YPZ3_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15940;old_locus_tag=YPZ3_2674 NC_014029.1 Protein Homology CDS 3443496 3444092 . - 0 ID=cds3130;Parent=gene3182;Dbxref=Genbank:WP_002208529.1;Name=WP_002208529.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11 NC_014029.1 RefSeq gene 3444276 3444875 . - . ID=gene3183;Name=YPZ3_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15945;old_locus_tag=YPZ3_2675 NC_014029.1 Protein Homology CDS 3444276 3444875 . - 0 ID=cds3131;Parent=gene3183;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11 NC_014029.1 RefSeq gene 3444903 3445370 . - . ID=gene3184;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YPZ3_RS15950;old_locus_tag=YPZ3_2676 NC_014029.1 Protein Homology CDS 3444903 3445370 . - 0 ID=cds3132;Parent=gene3184;Dbxref=Genbank:WP_002208532.1;Name=WP_002208532.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_002208532.1;transl_table=11 NC_014029.1 RefSeq gene 3445453 3447945 . - . ID=gene3185;Name=YPZ3_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15955;old_locus_tag=YPZ3_2677 NC_014029.1 Protein Homology CDS 3445453 3447945 . - 0 ID=cds3133;Parent=gene3185;Dbxref=Genbank:WP_002208534.1;Name=WP_002208534.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_002208534.1;transl_table=11 NC_014029.1 RefSeq gene 3447942 3448208 . - . ID=gene3186;Name=YPZ3_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15960 NC_014029.1 Protein Homology CDS 3447942 3448208 . - 0 ID=cds3134;Parent=gene3186;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11 NC_014029.1 RefSeq gene 3448198 3448701 . - . ID=gene3187;Name=YPZ3_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15965;old_locus_tag=YPZ3_2678 NC_014029.1 Protein Homology CDS 3448198 3448701 . - 0 ID=cds3135;Parent=gene3187;Dbxref=Genbank:WP_002208536.1;Name=WP_002208536.1;gbkey=CDS;product=ferredoxin-type protein NapF;protein_id=WP_002208536.1;transl_table=11 NC_014029.1 RefSeq gene 3449534 3450163 . + . ID=gene3188;Name=YPZ3_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15970;old_locus_tag=YPZ3_2679 NC_014029.1 Protein Homology CDS 3449534 3450163 . + 0 ID=cds3136;Parent=gene3188;Dbxref=Genbank:WP_002208537.1;Name=WP_002208537.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208537.1;transl_table=11 NC_014029.1 RefSeq gene 3450176 3450454 . - . ID=gene3189;Name=YPZ3_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15975 NC_014029.1 Protein Homology CDS 3450176 3450454 . - 0 ID=cds3137;Parent=gene3189;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11 NC_014029.1 RefSeq gene 3450869 3454000 . + . ID=gene3190;Name=YPZ3_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15980;old_locus_tag=YPZ3_2680 NC_014029.1 Protein Homology CDS 3450869 3454000 . + 0 ID=cds3138;Parent=gene3190;Dbxref=Genbank:WP_002208539.1;Name=WP_002208539.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002208539.1;transl_table=11 NC_014029.1 RefSeq gene 3454231 3454815 . + . ID=gene3191;Name=YPZ3_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15985;old_locus_tag=YPZ3_2681 NC_014029.1 Protein Homology CDS 3454231 3454815 . + 0 ID=cds3139;Parent=gene3191;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NC_014029.1 RefSeq gene 3455104 3455652 . + . ID=gene3192;Name=YPZ3_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15990;old_locus_tag=YPZ3_2682 NC_014029.1 Protein Homology CDS 3455104 3455652 . + 0 ID=cds3140;Parent=gene3192;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11 NC_014029.1 RefSeq gene 3456406 3457581 . - . ID=gene3193;Name=YPZ3_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS15995;old_locus_tag=YPZ3_2683 NC_014029.1 Protein Homology CDS 3456406 3457581 . - 0 ID=cds3141;Parent=gene3193;Dbxref=Genbank:WP_002208542.1;Name=WP_002208542.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002208542.1;transl_table=11 NC_014029.1 RefSeq gene 3457639 3459309 . - . ID=gene3194;Name=YPZ3_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16000;old_locus_tag=YPZ3_2684 NC_014029.1 Protein Homology CDS 3457639 3459309 . - 0 ID=cds3142;Parent=gene3194;Dbxref=Genbank:WP_002378486.1;Name=WP_002378486.1;gbkey=CDS;product=sulfatase;protein_id=WP_002378486.1;transl_table=11 NC_014029.1 RefSeq gene 3459790 3460860 . - . ID=gene3195;Name=YPZ3_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16005;old_locus_tag=YPZ3_2685 NC_014029.1 Protein Homology CDS 3459790 3460860 . - 0 ID=cds3143;Parent=gene3195;Dbxref=Genbank:WP_002208544.1;Name=WP_002208544.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208544.1;transl_table=11 NC_014029.1 RefSeq gene 3460853 3462622 . - . ID=gene3196;Name=YPZ3_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16010;old_locus_tag=YPZ3_2686 NC_014029.1 Protein Homology CDS 3460853 3462622 . - 0 ID=cds3144;Parent=gene3196;Dbxref=Genbank:WP_002208545.1;Name=WP_002208545.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002208545.1;transl_table=11 NC_014029.1 RefSeq gene 3462717 3463805 . - . ID=gene3197;Name=YPZ3_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16015;old_locus_tag=YPZ3_2687 NC_014029.1 Protein Homology CDS 3462717 3463805 . - 0 ID=cds3145;Parent=gene3197;Dbxref=Genbank:WP_002208546.1;Name=WP_002208546.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208546.1;transl_table=11 NC_014029.1 RefSeq gene 3464116 3464589 . + . ID=gene3198;Name=YPZ3_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16020;old_locus_tag=YPZ3_2688 NC_014029.1 Protein Homology CDS 3464116 3464589 . + 0 ID=cds3146;Parent=gene3198;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11 NC_014029.1 RefSeq gene 3464749 3465147 . + . ID=gene3199;Name=YPZ3_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16025;old_locus_tag=YPZ3_2689 NC_014029.1 Protein Homology CDS 3464749 3465147 . + 0 ID=cds3147;Parent=gene3199;Dbxref=Genbank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;product=reductase;protein_id=WP_002208548.1;transl_table=11 NC_014029.1 RefSeq gene 3465149 3466276 . + . ID=gene3200;Name=YPZ3_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16030;old_locus_tag=YPZ3_2690 NC_014029.1 Protein Homology CDS 3465149 3466276 . + 0 ID=cds3148;Parent=gene3200;Dbxref=Genbank:WP_002208549.1;Name=WP_002208549.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NC_014029.1 RefSeq gene 3466273 3466950 . + . ID=gene3201;Name=YPZ3_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16035;old_locus_tag=YPZ3_2691 NC_014029.1 Protein Homology CDS 3466273 3466950 . + 0 ID=cds3149;Parent=gene3201;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11 NC_014029.1 RefSeq gene 3467018 3467212 . + . ID=gene3202;Name=YPZ3_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16040 NC_014029.1 Protein Homology CDS 3467018 3467212 . + 0 ID=cds3150;Parent=gene3202;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11 NC_014029.1 RefSeq gene 3467417 3469516 . - . ID=gene3203;Name=YPZ3_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16045;old_locus_tag=YPZ3_2692 NC_014029.1 Protein Homology CDS 3467417 3469516 . - 0 ID=cds3151;Parent=gene3203;Dbxref=Genbank:WP_002208552.1;Name=WP_002208552.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_002208552.1;transl_table=11 NC_014029.1 RefSeq gene 3469518 3469970 . - . ID=gene3204;Name=YPZ3_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16050;old_locus_tag=YPZ3_2693 NC_014029.1 Protein Homology CDS 3469518 3469970 . - 0 ID=cds3152;Parent=gene3204;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11 NC_014029.1 RefSeq gene 3470064 3470930 . - . ID=gene3205;Name=YPZ3_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16055;old_locus_tag=YPZ3_2694 NC_014029.1 Protein Homology CDS 3470064 3470930 . - 0 ID=cds3153;Parent=gene3205;Dbxref=Genbank:WP_002208554.1;Name=WP_002208554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208554.1;transl_table=11 NC_014029.1 RefSeq gene 3471149 3471862 . - . ID=gene3206;Name=YPZ3_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16060;old_locus_tag=YPZ3_2695 NC_014029.1 Protein Homology CDS 3471149 3471862 . - 0 ID=cds3154;Parent=gene3206;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3471900 3472617 . + . ID=id255;gbkey=repeat_region NC_014029.1 RefSeq gene 3472010 3472468 . - . ID=gene3207;Name=YPZ3_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16065;old_locus_tag=YPZ3_2696 NC_014029.1 Protein Homology CDS 3472010 3472468 . - 0 ID=cds3155;Parent=gene3207;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3472458 3472613 . - . ID=gene3208;Name=YPZ3_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16070 NC_014029.1 Protein Homology CDS 3472458 3472613 . - 0 ID=cds3156;Parent=gene3208;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 3472643 3473701 . - . ID=gene3209;Name=YPZ3_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16075;old_locus_tag=YPZ3_2697 NC_014029.1 Protein Homology CDS 3472643 3473701 . - 0 ID=cds3157;Parent=gene3209;Dbxref=Genbank:WP_002208557.1;Name=WP_002208557.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_002208557.1;transl_table=11 NC_014029.1 RefSeq gene 3473719 3474600 . - . ID=gene3210;Name=YPZ3_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16080;old_locus_tag=YPZ3_2698 NC_014029.1 Protein Homology CDS 3473719 3474600 . - 0 ID=cds3158;Parent=gene3210;Dbxref=Genbank:WP_002227834.1;Name=WP_002227834.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NC_014029.1 RefSeq gene 3474765 3475334 . + . ID=gene3211;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YPZ3_RS16085;old_locus_tag=YPZ3_2699 NC_014029.1 Protein Homology CDS 3474765 3475334 . + 0 ID=cds3159;Parent=gene3211;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11 NC_014029.1 RefSeq gene 3475337 3475807 . + . ID=gene3212;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YPZ3_RS16090;old_locus_tag=YPZ3_2700 NC_014029.1 Protein Homology CDS 3475337 3475807 . + 0 ID=cds3160;Parent=gene3212;Dbxref=Genbank:WP_002224836.1;Name=WP_002224836.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_002224836.1;transl_table=11 NC_014029.1 RefSeq gene 3476051 3476470 . - . ID=gene3213;Name=YPZ3_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16095 NC_014029.1 Protein Homology CDS 3476051 3476470 . - 0 ID=cds3161;Parent=gene3213;Dbxref=Genbank:WP_002217563.1;Name=WP_002217563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217563.1;transl_table=11 NC_014029.1 RefSeq gene 3476474 3477169 . - . ID=gene3214;Name=YPZ3_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16100;old_locus_tag=YPZ3_2701 NC_014029.1 Protein Homology CDS 3476474 3477169 . - 0 ID=cds3162;Parent=gene3214;Dbxref=Genbank:WP_002208561.1;Name=WP_002208561.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208561.1;transl_table=11 NC_014029.1 RefSeq gene 3477507 3477680 . + . ID=gene3215;Name=YPZ3_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16105 NC_014029.1 Protein Homology CDS 3477507 3477680 . + 0 ID=cds3163;Parent=gene3215;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11 NC_014029.1 RefSeq gene 3477769 3478833 . - . ID=gene3216;Name=YPZ3_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16110;old_locus_tag=YPZ3_2702 NC_014029.1 Protein Homology CDS 3477769 3478833 . - 0 ID=cds3164;Parent=gene3216;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11 NC_014029.1 RefSeq gene 3479164 3480648 . + . ID=gene3217;Name=YPZ3_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16115;old_locus_tag=YPZ3_2703 NC_014029.1 Protein Homology CDS 3479164 3480648 . + 0 ID=cds3165;Parent=gene3217;Dbxref=Genbank:WP_002217569.1;Name=WP_002217569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217569.1;transl_table=11 NC_014029.1 RefSeq gene 3480755 3481111 . + . ID=gene3218;Name=YPZ3_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16120;old_locus_tag=YPZ3_2704 NC_014029.1 Protein Homology CDS 3480755 3481111 . + 0 ID=cds3166;Parent=gene3218;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11 NC_014029.1 RefSeq gene 3481323 3482030 . - . ID=gene3219;Name=YPZ3_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16125;old_locus_tag=YPZ3_2705 NC_014029.1 Protein Homology CDS 3481323 3482030 . - 0 ID=cds3167;Parent=gene3219;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3482109 3482827 . + . ID=id256;gbkey=repeat_region NC_014029.1 RefSeq gene 3482218 3482676 . - . ID=gene3220;Name=YPZ3_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16130;old_locus_tag=YPZ3_2706 NC_014029.1 Protein Homology CDS 3482218 3482676 . - 0 ID=cds3168;Parent=gene3220;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3482666 3482896 . - . ID=gene3221;Name=YPZ3_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16135 NC_014029.1 Protein Homology CDS 3482666 3482896 . - 0 ID=cds3169;Parent=gene3221;Dbxref=Genbank:WP_002430127.1;Name=WP_002430127.1;gbkey=CDS;product=invasin;protein_id=WP_002430127.1;transl_table=11 NC_014029.1 RefSeq gene 3483023 3484408 . - . ID=gene3222;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YPZ3_RS16140;old_locus_tag=YPZ3_2707 NC_014029.1 Protein Homology CDS 3483023 3484408 . - 0 ID=cds3170;Parent=gene3222;Dbxref=Genbank:WP_002222677.1;Name=WP_002222677.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_002222677.1;transl_table=11 NC_014029.1 RefSeq gene 3484619 3485113 . + . ID=gene3223;Name=YPZ3_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16145;old_locus_tag=YPZ3_2708 NC_014029.1 Protein Homology CDS 3484619 3485113 . + 0 ID=cds3171;Parent=gene3223;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11 NC_014029.1 RefSeq gene 3485124 3485846 . + . ID=gene3224;Name=YPZ3_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16150;old_locus_tag=YPZ3_2709 NC_014029.1 Protein Homology CDS 3485124 3485846 . + 0 ID=cds3172;Parent=gene3224;Dbxref=Genbank:WP_002208568.1;Name=WP_002208568.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_002208568.1;transl_table=11 NC_014029.1 RefSeq gene 3486142 3486666 . + . ID=gene3225;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YPZ3_RS16155;old_locus_tag=YPZ3_2710 NC_014029.1 Protein Homology CDS 3486142 3486666 . + 0 ID=cds3173;Parent=gene3225;Dbxref=Genbank:WP_002208569.1;Name=WP_002208569.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NC_014029.1 RefSeq gene 3486663 3487727 . + . ID=gene3226;Name=YPZ3_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16160;old_locus_tag=YPZ3_2711 NC_014029.1 Protein Homology CDS 3486663 3487727 . + 0 ID=cds3174;Parent=gene3226;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11 NC_014029.1 RefSeq gene 3487771 3490200 . - . ID=gene3227;Name=YPZ3_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16165;old_locus_tag=YPZ3_2712 NC_014029.1 Protein Homology CDS 3487771 3490200 . - 0 ID=cds3175;Parent=gene3227;Dbxref=Genbank:WP_002208571.1;Name=WP_002208571.1;gbkey=CDS;product=permease;protein_id=WP_002208571.1;transl_table=11 NC_014029.1 RefSeq gene 3490197 3490883 . - . ID=gene3228;Name=YPZ3_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16170;old_locus_tag=YPZ3_2713 NC_014029.1 Protein Homology CDS 3490197 3490883 . - 0 ID=cds3176;Parent=gene3228;Dbxref=Genbank:WP_002208572.1;Name=WP_002208572.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002208572.1;transl_table=11 NC_014029.1 RefSeq gene 3490854 3491489 . + . ID=gene3229;Name=YPZ3_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16175;old_locus_tag=YPZ3_2714 NC_014029.1 Protein Homology CDS 3490854 3491489 . + 0 ID=cds3177;Parent=gene3229;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NC_014029.1 RefSeq gene 3491876 3492652 . + . ID=gene3230;Name=YPZ3_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16180;old_locus_tag=YPZ3_2715 NC_014029.1 Protein Homology CDS 3491876 3492652 . + 0 ID=cds3178;Parent=gene3230;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NC_014029.1 RefSeq gene 3492729 3493598 . + . ID=gene3231;Name=YPZ3_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16185;old_locus_tag=YPZ3_2716 NC_014029.1 Protein Homology CDS 3492729 3493598 . + 0 ID=cds3179;Parent=gene3231;Dbxref=Genbank:WP_002208575.1;Name=WP_002208575.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002208575.1;transl_table=11 NC_014029.1 RefSeq gene 3493793 3494707 . + . ID=gene3232;Name=YPZ3_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16190;old_locus_tag=YPZ3_2717 NC_014029.1 Protein Homology CDS 3493793 3494707 . + 0 ID=cds3180;Parent=gene3232;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11 NC_014029.1 RefSeq gene 3494710 3495159 . + . ID=gene3233;Name=YPZ3_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16195;old_locus_tag=YPZ3_2718 NC_014029.1 Protein Homology CDS 3494710 3495159 . + 0 ID=cds3181;Parent=gene3233;Dbxref=Genbank:WP_002208577.1;Name=WP_002208577.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208577.1;transl_table=11 NC_014029.1 RefSeq gene 3495268 3495687 . - . ID=gene3234;Name=YPZ3_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16200;old_locus_tag=YPZ3_2719 NC_014029.1 Protein Homology CDS 3495268 3495687 . - 0 ID=cds3182;Parent=gene3234;Dbxref=Genbank:WP_002208578.1;Name=WP_002208578.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208578.1;transl_table=11 NC_014029.1 RefSeq gene 3495894 3498779 . + . ID=gene3235;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YPZ3_RS16205;old_locus_tag=YPZ3_2720 NC_014029.1 Protein Homology CDS 3495894 3498779 . + 0 ID=cds3183;Parent=gene3235;Dbxref=Genbank:WP_002223301.1;Name=WP_002223301.1;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=WP_002223301.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3498850 3499260 . + . ID=id257;gbkey=repeat_region NC_014029.1 RefSeq gene 3499300 3500109 . + . ID=gene3236;Name=YPZ3_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16210;old_locus_tag=YPZ3_2721 NC_014029.1 Protein Homology CDS 3499300 3500109 . + 0 ID=cds3184;Parent=gene3236;Dbxref=Genbank:WP_002208580.1;Name=WP_002208580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208580.1;transl_table=11 NC_014029.1 RefSeq gene 3500373 3500852 . + . ID=gene3237;Name=YPZ3_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16215;old_locus_tag=YPZ3_2722 NC_014029.1 Protein Homology CDS 3500373 3500852 . + 0 ID=cds3185;Parent=gene3237;Dbxref=Genbank:WP_002208581.1;Name=WP_002208581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208581.1;transl_table=11 NC_014029.1 RefSeq gene 3500918 3501175 . + . ID=gene3238;Name=YPZ3_RS16220;gbkey=Gene;gene_biotype=other;locus_tag=YPZ3_RS16220 NC_014029.1 RefSeq repeat_region 3500933 3501102 . + . ID=id258;gbkey=repeat_region NC_014029.1 RefSeq gene 3501189 3501428 . + . ID=gene3239;Name=YPZ3_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16225 NC_014029.1 Protein Homology CDS 3501189 3501428 . + 0 ID=cds3186;Parent=gene3239;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NC_014029.1 RefSeq gene 3501532 3502155 . - . ID=gene3240;Name=YPZ3_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16230;old_locus_tag=YPZ3_2723 NC_014029.1 Protein Homology CDS 3501532 3502155 . - 0 ID=cds3187;Parent=gene3240;Dbxref=Genbank:WP_002228353.1;Name=WP_002228353.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002228353.1;transl_table=11 NC_014029.1 RefSeq gene 3502149 3502940 . - . ID=gene3241;Name=YPZ3_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16235;old_locus_tag=YPZ3_2724 NC_014029.1 Protein Homology CDS 3502149 3502940 . - 0 ID=cds3188;Parent=gene3241;Dbxref=Genbank:WP_002232230.1;Name=WP_002232230.1;gbkey=CDS;product=metallophosphatase;protein_id=WP_002232230.1;transl_table=11 NC_014029.1 RefSeq gene 3502930 3503187 . - . ID=gene3242;Name=YPZ3_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16240 NC_014029.1 GeneMarkS+ CDS 3502930 3503187 . - 0 ID=cds3189;Parent=gene3242;Dbxref=Genbank:WP_002215363.1;Name=WP_002215363.1;gbkey=CDS;product=protein ushA;protein_id=WP_002215363.1;transl_table=11 NC_014029.1 RefSeq gene 3503469 3504683 . + . ID=gene3243;Name=YPZ3_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16245;old_locus_tag=YPZ3_2725 NC_014029.1 Protein Homology CDS 3503469 3504683 . + 0 ID=cds3190;Parent=gene3243;Dbxref=Genbank:WP_002208584.1;Name=WP_002208584.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_002208584.1;transl_table=11 NC_014029.1 RefSeq gene 3504918 3506609 . + . ID=gene3244;Name=YPZ3_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16250;old_locus_tag=YPZ3_2726 NC_014029.1 Protein Homology CDS 3504918 3506609 . + 0 ID=cds3191;Parent=gene3244;Dbxref=Genbank:WP_002208585.1;Name=WP_002208585.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_002208585.1;transl_table=11 NC_014029.1 RefSeq gene 3506706 3508010 . - . ID=gene3245;Name=YPZ3_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16255;old_locus_tag=YPZ3_2727 NC_014029.1 Protein Homology CDS 3506706 3508010 . - 0 ID=cds3192;Parent=gene3245;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NC_014029.1 RefSeq gene 3508214 3509365 . - . ID=gene3246;Name=YPZ3_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16260 NC_014029.1 Protein Homology CDS 3508214 3509365 . - 0 ID=cds3193;Parent=gene3246;Dbxref=Genbank:WP_002208587.1;Name=WP_002208587.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_002208587.1;transl_table=11 NC_014029.1 RefSeq gene 3509413 3510786 . - . ID=gene3247;Name=YPZ3_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16265;old_locus_tag=YPZ3_2729 NC_014029.1 Protein Homology CDS 3509413 3510786 . - 0 ID=cds3194;Parent=gene3247;Dbxref=Genbank:WP_002208588.1;Name=WP_002208588.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002208588.1;transl_table=11 NC_014029.1 RefSeq gene 3510791 3511534 . - . ID=gene3248;Name=YPZ3_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16270;old_locus_tag=YPZ3_2730 NC_014029.1 Protein Homology CDS 3510791 3511534 . - 0 ID=cds3195;Parent=gene3248;Dbxref=Genbank:WP_002208589.1;Name=WP_002208589.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002208589.1;transl_table=11 NC_014029.1 RefSeq gene 3511537 3512943 . - . ID=gene3249;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=YPZ3_RS16275;old_locus_tag=YPZ3_2731 NC_014029.1 Protein Homology CDS 3511537 3512943 . - 0 ID=cds3196;Parent=gene3249;Dbxref=Genbank:WP_002208590.1;Name=WP_002208590.1;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;protein_id=WP_002208590.1;transl_table=11 NC_014029.1 RefSeq gene 3513137 3514102 . - . ID=gene3250;Name=YPZ3_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16280;old_locus_tag=YPZ3_2732 NC_014029.1 Protein Homology CDS 3513137 3514102 . - 0 ID=cds3197;Parent=gene3250;Dbxref=Genbank:WP_002223297.1;Name=WP_002223297.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;product=GDP-fucose synthetase;protein_id=WP_002223297.1;transl_table=11 NC_014029.1 RefSeq gene 3514108 3515230 . - . ID=gene3251;Name=YPZ3_RS16285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS16285;pseudo=true NC_014029.1 Protein Homology CDS 3514108 3515230 . - 0 ID=cds3198;Parent=gene3251;Note=catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3515246 3516259 . - . ID=gene3252;Name=YPZ3_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16290;old_locus_tag=YPZ3_2735 NC_014029.1 Protein Homology CDS 3515246 3516259 . - 0 ID=cds3199;Parent=gene3252;Dbxref=Genbank:WP_002208591.1;Name=WP_002208591.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208591.1;transl_table=11 NC_014029.1 RefSeq gene 3516508 3517404 . - . ID=gene3253;Name=YPZ3_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16295;old_locus_tag=YPZ3_2736 NC_014029.1 Protein Homology CDS 3516508 3517404 . - 0 ID=cds3200;Parent=gene3253;Dbxref=Genbank:WP_002354669.1;Name=WP_002354669.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002354669.1;transl_table=11 NC_014029.1 RefSeq gene 3517726 3518868 . - . ID=gene3254;Name=YPZ3_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16300;old_locus_tag=YPZ3_2737 NC_014029.1 Protein Homology CDS 3517726 3518868 . - 0 ID=cds3201;Parent=gene3254;Dbxref=Genbank:WP_002208592.1;Name=WP_002208592.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208592.1;transl_table=11 NC_014029.1 RefSeq gene 3519248 3519961 . - . ID=gene3255;Name=YPZ3_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16305;old_locus_tag=YPZ3_2738 NC_014029.1 Protein Homology CDS 3519248 3519961 . - 0 ID=cds3202;Parent=gene3255;Dbxref=Genbank:WP_002215988.1;Name=WP_002215988.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002215988.1;transl_table=11 NC_014029.1 RefSeq gene 3519972 3521315 . - . ID=gene3256;Name=YPZ3_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16310;old_locus_tag=YPZ3_2739 NC_014029.1 Protein Homology CDS 3519972 3521315 . - 0 ID=cds3203;Parent=gene3256;Dbxref=Genbank:WP_002208593.1;Name=WP_002208593.1;gbkey=CDS;product=O-unit flippase Wzx;protein_id=WP_002208593.1;transl_table=11 NC_014029.1 RefSeq gene 3521389 3522672 . - . ID=gene3257;Name=YPZ3_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16315;old_locus_tag=YPZ3_2740 NC_014029.1 Protein Homology CDS 3521389 3522672 . - 0 ID=cds3204;Parent=gene3257;Dbxref=Genbank:WP_002208594.1;Name=WP_002208594.1;gbkey=CDS;product=O-antigen synthesis protein WbyH;protein_id=WP_002208594.1;transl_table=11 NC_014029.1 RefSeq gene 3522673 3523530 . - . ID=gene3258;Name=YPZ3_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16320;old_locus_tag=YPZ3_2741 NC_014029.1 Protein Homology CDS 3522673 3523530 . - 0 ID=cds3205;Parent=gene3258;Dbxref=Genbank:WP_002208595.1;Name=WP_002208595.1;gbkey=CDS;product=paratose synthase;protein_id=WP_002208595.1;transl_table=11 NC_014029.1 RefSeq gene 3523567 3524880 . - . ID=gene3259;Name=YPZ3_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16325;old_locus_tag=YPZ3_2742 NC_014029.1 Protein Homology CDS 3523567 3524880 . - 0 ID=cds3206;Parent=gene3259;Dbxref=Genbank:WP_002208596.1;Name=WP_002208596.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208596.1;transl_table=11 NC_014029.1 RefSeq gene 3524898 3525797 . - . ID=gene3260;Name=YPZ3_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16330;old_locus_tag=YPZ3_2743 NC_014029.1 Protein Homology CDS 3524898 3525797 . - 0 ID=cds3207;Parent=gene3260;Dbxref=Genbank:WP_002354671.1;Name=WP_002354671.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11 NC_014029.1 RefSeq gene 3525829 3525972 . - . ID=gene3261;Name=YPZ3_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16335 NC_014029.1 Protein Homology CDS 3525829 3525972 . - 0 ID=cds3208;Parent=gene3261;Dbxref=Genbank:WP_002215986.1;Name=WP_002215986.1;gbkey=CDS;product=CDP-glycerol glycerophosphotransferase;protein_id=WP_002215986.1;transl_table=11 NC_014029.1 RefSeq gene 3525977 3526750 . - . ID=gene3262;Name=YPZ3_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16340;old_locus_tag=YPZ3_2744 NC_014029.1 Protein Homology CDS 3525977 3526750 . - 0 ID=cds3209;Parent=gene3262;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NC_014029.1 RefSeq gene 3526788 3527777 . - . ID=gene3263;Name=YPZ3_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16345;old_locus_tag=YPZ3_2745 NC_014029.1 Protein Homology CDS 3526788 3527777 . - 0 ID=cds3210;Parent=gene3263;Dbxref=Genbank:WP_002208598.1;Name=WP_002208598.1;gbkey=CDS;product=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase;protein_id=WP_002208598.1;transl_table=11 NC_014029.1 RefSeq gene 3528375 3529337 . - . ID=gene3264;Name=YPZ3_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16350;old_locus_tag=YPZ3_2746 NC_014029.1 Protein Homology CDS 3528375 3529337 . - 0 ID=cds3211;Parent=gene3264;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NC_014029.1 RefSeq gene 3529427 3530071 . - . ID=gene3265;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YPZ3_RS16355;old_locus_tag=YPZ3_2747 NC_014029.1 Protein Homology CDS 3529427 3530071 . - 0 ID=cds3212;Parent=gene3265;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NC_014029.1 RefSeq gene 3530298 3532172 . - . ID=gene3266;Name=YPZ3_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16360;old_locus_tag=YPZ3_2748 NC_014029.1 Protein Homology CDS 3530298 3532172 . - 0 ID=cds3213;Parent=gene3266;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11 NC_014029.1 RefSeq gene 3532364 3532969 . - . ID=gene3267;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YPZ3_RS16365;old_locus_tag=YPZ3_2749 NC_014029.1 Protein Homology CDS 3532364 3532969 . - 0 ID=cds3214;Parent=gene3267;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11 NC_014029.1 RefSeq gene 3532969 3533301 . - . ID=gene3268;Name=YPZ3_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16370;old_locus_tag=YPZ3_2750 NC_014029.1 Protein Homology CDS 3532969 3533301 . - 0 ID=cds3215;Parent=gene3268;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11 NC_014029.1 RefSeq gene 3533357 3535333 . - . ID=gene3269;Name=YPZ3_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16375;old_locus_tag=YPZ3_2751 NC_014029.1 Protein Homology CDS 3533357 3535333 . - 0 ID=cds3216;Parent=gene3269;Dbxref=Genbank:WP_002208605.1;Name=WP_002208605.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NC_014029.1 RefSeq gene 3535989 3536552 . - . ID=gene3270;Name=YPZ3_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16380;old_locus_tag=YPZ3_2752 NC_014029.1 Protein Homology CDS 3535989 3536552 . - 0 ID=cds3217;Parent=gene3270;Dbxref=Genbank:WP_002208606.1;Name=WP_002208606.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002208606.1;transl_table=11 NC_014029.1 RefSeq gene 3536985 3537173 . + . ID=gene3271;Name=YPZ3_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16385 NC_014029.1 Protein Homology CDS 3536985 3537173 . + 0 ID=cds3218;Parent=gene3271;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11 NC_014029.1 RefSeq gene 3537372 3537908 . + . ID=gene3272;Name=YPZ3_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16390;old_locus_tag=YPZ3_2753 NC_014029.1 Protein Homology CDS 3537372 3537908 . + 0 ID=cds3219;Parent=gene3272;Dbxref=Genbank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_002208610.1;transl_table=11 NC_014029.1 RefSeq gene 3538079 3538234 . + . ID=gene3273;Name=YPZ3_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16395 NC_014029.1 Protein Homology CDS 3538079 3538234 . + 0 ID=cds3220;Parent=gene3273;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11 NC_014029.1 RefSeq gene 3538574 3541936 . - . ID=gene3274;Name=YPZ3_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16400;old_locus_tag=YPZ3_2754 NC_014029.1 Protein Homology CDS 3538574 3541936 . - 0 ID=cds3221;Parent=gene3274;Dbxref=Genbank:WP_002208612.1;Name=WP_002208612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208612.1;transl_table=11 NC_014029.1 RefSeq gene 3542232 3542585 . - . ID=gene3275;Name=YPZ3_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16405;old_locus_tag=YPZ3_2755 NC_014029.1 Protein Homology CDS 3542232 3542585 . - 0 ID=cds3222;Parent=gene3275;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11 NC_014029.1 RefSeq gene 3542598 3543254 . - . ID=gene3276;Name=YPZ3_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16410;old_locus_tag=YPZ3_2756 NC_014029.1 Protein Homology CDS 3542598 3543254 . - 0 ID=cds3223;Parent=gene3276;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11 NC_014029.1 RefSeq gene 3543399 3544586 . + . ID=gene3277;Name=YPZ3_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16415;old_locus_tag=YPZ3_2757 NC_014029.1 Protein Homology CDS 3543399 3544586 . + 0 ID=cds3224;Parent=gene3277;Dbxref=Genbank:WP_002208615.1;Name=WP_002208615.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_002208615.1;transl_table=11 NC_014029.1 RefSeq gene 3544603 3547755 . + . ID=gene3278;Name=YPZ3_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16420;old_locus_tag=YPZ3_2758 NC_014029.1 Protein Homology CDS 3544603 3547755 . + 0 ID=cds3225;Parent=gene3278;Dbxref=Genbank:WP_002208616.1;Name=WP_002208616.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002208616.1;transl_table=11 NC_014029.1 RefSeq gene 3547941 3548201 . + . ID=gene3279;Name=YPZ3_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16425 NC_014029.1 Protein Homology CDS 3547941 3548201 . + 0 ID=cds3226;Parent=gene3279;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11 NC_014029.1 RefSeq gene 3548217 3548360 . + . ID=gene3280;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS16430 NC_014029.1 Protein Homology CDS 3548217 3548360 . + 0 ID=cds3227;Parent=gene3280;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NC_014029.1 RefSeq gene 3549234 3549587 . + . ID=gene3281;Name=YPZ3_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16435;old_locus_tag=YPZ3_2759 NC_014029.1 Protein Homology CDS 3549234 3549587 . + 0 ID=cds3228;Parent=gene3281;Dbxref=Genbank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11 NC_014029.1 RefSeq gene 3549746 3550114 . + . ID=gene3282;Name=YPZ3_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16440;old_locus_tag=YPZ3_2760 NC_014029.1 Protein Homology CDS 3549746 3550114 . + 0 ID=cds3229;Parent=gene3282;Dbxref=Genbank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218472.1;transl_table=11 NC_014029.1 RefSeq gene 3550163 3550366 . + . ID=gene3283;Name=YPZ3_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16445 NC_014029.1 Protein Homology CDS 3550163 3550366 . + 0 ID=cds3230;Parent=gene3283;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NC_014029.1 RefSeq gene 3551254 3551643 . + . ID=gene3284;Name=YPZ3_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16450;old_locus_tag=YPZ3_2761 NC_014029.1 Protein Homology CDS 3551254 3551643 . + 0 ID=cds3231;Parent=gene3284;Dbxref=Genbank:WP_002208623.1;Name=WP_002208623.1;gbkey=CDS;product=6-O-methylguanine DNA methyltransferase;protein_id=WP_002208623.1;transl_table=11 NC_014029.1 RefSeq gene 3551779 3552300 . - . ID=gene3285;Name=YPZ3_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16455;old_locus_tag=YPZ3_2762 NC_014029.1 Protein Homology CDS 3551779 3552300 . - 0 ID=cds3232;Parent=gene3285;Dbxref=Genbank:WP_002208624.1;Name=WP_002208624.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002208624.1;transl_table=11 NC_014029.1 RefSeq gene 3552557 3553417 . + . ID=gene3286;Name=YPZ3_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16460;old_locus_tag=YPZ3_2763 NC_014029.1 Protein Homology CDS 3552557 3553417 . + 0 ID=cds3233;Parent=gene3286;Dbxref=Genbank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_002208625.1;transl_table=11 NC_014029.1 RefSeq gene 3553677 3554966 . - . ID=gene3287;Name=YPZ3_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16465;old_locus_tag=YPZ3_2764 NC_014029.1 Protein Homology CDS 3553677 3554966 . - 0 ID=cds3234;Parent=gene3287;Dbxref=Genbank:WP_002228344.1;Name=WP_002228344.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_002228344.1;transl_table=11 NC_014029.1 RefSeq gene 3555006 3555344 . - . ID=gene3288;Name=YPZ3_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16470;old_locus_tag=YPZ3_2765 NC_014029.1 Protein Homology CDS 3555006 3555344 . - 0 ID=cds3235;Parent=gene3288;Dbxref=Genbank:WP_002208627.1;Name=WP_002208627.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_002208627.1;transl_table=11 NC_014029.1 RefSeq gene 3555754 3557577 . - . ID=gene3289;Name=YPZ3_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16475;old_locus_tag=YPZ3_2766 NC_014029.1 Protein Homology CDS 3555754 3557577 . - 0 ID=cds3236;Parent=gene3289;Dbxref=Genbank:WP_002208628.1;Name=WP_002208628.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208628.1;transl_table=11 NC_014029.1 RefSeq gene 3557570 3559336 . - . ID=gene3290;Name=YPZ3_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16480;old_locus_tag=YPZ3_2767 NC_014029.1 Protein Homology CDS 3557570 3559336 . - 0 ID=cds3237;Parent=gene3290;Dbxref=Genbank:WP_002208629.1;Name=WP_002208629.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208629.1;transl_table=11 NC_014029.1 RefSeq gene 3559438 3559899 . - . ID=gene3291;Name=YPZ3_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16485;old_locus_tag=YPZ3_2768 NC_014029.1 Protein Homology CDS 3559438 3559899 . - 0 ID=cds3238;Parent=gene3291;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NC_014029.1 RefSeq gene 3560025 3561065 . + . ID=gene3292;Name=YPZ3_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16490;old_locus_tag=YPZ3_2769 NC_014029.1 Protein Homology CDS 3560025 3561065 . + 0 ID=cds3239;Parent=gene3292;Dbxref=Genbank:WP_002208631.1;Name=WP_002208631.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_002208631.1;transl_table=11 NC_014029.1 RefSeq gene 3561277 3562098 . - . ID=gene3293;Name=YPZ3_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16495;old_locus_tag=YPZ3_2770 NC_014029.1 Protein Homology CDS 3561277 3562098 . - 0 ID=cds3240;Parent=gene3293;Dbxref=Genbank:WP_002208632.1;Name=WP_002208632.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_002208632.1;transl_table=11 NC_014029.1 RefSeq gene 3562203 3563906 . + . ID=gene3294;Name=YPZ3_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16500;old_locus_tag=YPZ3_2771 NC_014029.1 Protein Homology CDS 3562203 3563906 . + 0 ID=cds3241;Parent=gene3294;Dbxref=Genbank:WP_002208633.1;Name=WP_002208633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208633.1;transl_table=11 NC_014029.1 RefSeq gene 3564171 3564869 . + . ID=gene3295;Name=YPZ3_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16505;old_locus_tag=YPZ3_2772 NC_014029.1 Protein Homology CDS 3564171 3564869 . + 0 ID=cds3242;Parent=gene3295;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11 NC_014029.1 RefSeq gene 3564955 3565362 . - . ID=gene3296;Name=YPZ3_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16510;old_locus_tag=YPZ3_2773 NC_014029.1 Protein Homology CDS 3564955 3565362 . - 0 ID=cds3243;Parent=gene3296;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11 NC_014029.1 RefSeq gene 3565716 3566162 . - . ID=gene3297;Name=YPZ3_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16515;old_locus_tag=YPZ3_2774 NC_014029.1 Protein Homology CDS 3565716 3566162 . - 0 ID=cds3244;Parent=gene3297;Dbxref=Genbank:WP_002208637.1;Name=WP_002208637.1;gbkey=CDS;product=transporter;protein_id=WP_002208637.1;transl_table=11 NC_014029.1 RefSeq gene 3566302 3568188 . - . ID=gene3298;Name=YPZ3_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16520;old_locus_tag=YPZ3_2775 NC_014029.1 Protein Homology CDS 3566302 3568188 . - 0 ID=cds3245;Parent=gene3298;Dbxref=Genbank:WP_002208638.1;Name=WP_002208638.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208638.1;transl_table=11 NC_014029.1 RefSeq gene 3568489 3568761 . - . ID=gene3299;Name=YPZ3_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16525 NC_014029.1 Protein Homology CDS 3568489 3568761 . - 0 ID=cds3246;Parent=gene3299;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11 NC_014029.1 RefSeq gene 3568979 3571333 . - . ID=gene3300;Name=YPZ3_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16530;old_locus_tag=YPZ3_2776 NC_014029.1 Protein Homology CDS 3568979 3571333 . - 0 ID=cds3247;Parent=gene3300;Dbxref=Genbank:WP_002208640.1;Name=WP_002208640.1;gbkey=CDS;product=peptidase;protein_id=WP_002208640.1;transl_table=11 NC_014029.1 RefSeq gene 3571528 3572799 . - . ID=gene3301;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YPZ3_RS16535;old_locus_tag=YPZ3_2777 NC_014029.1 Protein Homology CDS 3571528 3572799 . - 0 ID=cds3248;Parent=gene3301;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NC_014029.1 RefSeq gene 3573005 3573628 . - . ID=gene3302;Name=YPZ3_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16540;old_locus_tag=YPZ3_2778 NC_014029.1 Protein Homology CDS 3573005 3573628 . - 0 ID=cds3249;Parent=gene3302;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11 NC_014029.1 RefSeq gene 3574090 3575394 . - . ID=gene3303;Name=YPZ3_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16545;old_locus_tag=YPZ3_2779 NC_014029.1 Protein Homology CDS 3574090 3575394 . - 0 ID=cds3250;Parent=gene3303;Dbxref=Genbank:WP_002208643.1;Name=WP_002208643.1;gbkey=CDS;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NC_014029.1 RefSeq gene 3575467 3575652 . - . ID=gene3304;Name=YPZ3_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16550 NC_014029.1 Protein Homology CDS 3575467 3575652 . - 0 ID=cds3251;Parent=gene3304;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11 NC_014029.1 RefSeq gene 3575811 3576125 . - . ID=gene3305;Name=YPZ3_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16555;old_locus_tag=YPZ3_2780 NC_014029.1 Protein Homology CDS 3575811 3576125 . - 0 ID=cds3252;Parent=gene3305;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11 NC_014029.1 RefSeq gene 3576480 3577058 . + . ID=gene3306;Name=YPZ3_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16560;old_locus_tag=YPZ3_2781 NC_014029.1 Protein Homology CDS 3576480 3577058 . + 0 ID=cds3253;Parent=gene3306;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11 NC_014029.1 RefSeq gene 3577176 3578654 . + . ID=gene3307;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YPZ3_RS16565;old_locus_tag=YPZ3_2782 NC_014029.1 Protein Homology CDS 3577176 3578654 . + 0 ID=cds3254;Parent=gene3307;Dbxref=Genbank:WP_002223277.1;Name=WP_002223277.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_002223277.1;transl_table=11 NC_014029.1 RefSeq gene 3578946 3579713 . + . ID=gene3308;Name=YPZ3_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16570;old_locus_tag=YPZ3_2783 NC_014029.1 Protein Homology CDS 3578946 3579713 . + 0 ID=cds3255;Parent=gene3308;Dbxref=Genbank:WP_002208648.1;Name=WP_002208648.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_002208648.1;transl_table=11 NC_014029.1 RefSeq gene 3580083 3581039 . + . ID=gene3309;Name=YPZ3_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16575;old_locus_tag=YPZ3_2784 NC_014029.1 Protein Homology CDS 3580083 3581039 . + 0 ID=cds3256;Parent=gene3309;Dbxref=Genbank:WP_002208649.1;Name=WP_002208649.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208649.1;transl_table=11 NC_014029.1 RefSeq gene 3581044 3583035 . + . ID=gene3310;Name=YPZ3_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16580;old_locus_tag=YPZ3_2785 NC_014029.1 Protein Homology CDS 3581044 3583035 . + 0 ID=cds3257;Parent=gene3310;Dbxref=Genbank:WP_002208650.1;Name=WP_002208650.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NC_014029.1 RefSeq gene 3583025 3583639 . + . ID=gene3311;Name=YPZ3_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16585 NC_014029.1 Protein Homology CDS 3583025 3583639 . + 0 ID=cds3258;Parent=gene3311;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11 NC_014029.1 RefSeq gene 3583639 3583971 . + . ID=gene3312;Name=YPZ3_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16590;old_locus_tag=YPZ3_2787 NC_014029.1 Protein Homology CDS 3583639 3583971 . + 0 ID=cds3259;Parent=gene3312;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11 NC_014029.1 RefSeq gene 3583985 3584872 . + . ID=gene3313;Name=YPZ3_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16595;old_locus_tag=YPZ3_2788 NC_014029.1 Protein Homology CDS 3583985 3584872 . + 0 ID=cds3260;Parent=gene3313;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11 NC_014029.1 RefSeq gene 3585356 3586720 . + . ID=gene3314;Name=YPZ3_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16600;old_locus_tag=YPZ3_2789 NC_014029.1 Protein Homology CDS 3585356 3586720 . + 0 ID=cds3261;Parent=gene3314;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11 NC_014029.1 RefSeq gene 3586844 3587335 . - . ID=gene3315;Name=YPZ3_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16605;old_locus_tag=YPZ3_2790 NC_014029.1 Protein Homology CDS 3586844 3587335 . - 0 ID=cds3262;Parent=gene3315;Dbxref=Genbank:WP_002208655.1;Name=WP_002208655.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_002208655.1;transl_table=11 NC_014029.1 RefSeq gene 3587567 3588478 . + . ID=gene3316;Name=YPZ3_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16610 NC_014029.1 Protein Homology CDS 3587567 3588478 . + 0 ID=cds3263;Parent=gene3316;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NC_014029.1 RefSeq gene 3588441 3589031 . + . ID=gene3317;Name=YPZ3_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16615;old_locus_tag=YPZ3_2792 NC_014029.1 Protein Homology CDS 3588441 3589031 . + 0 ID=cds3264;Parent=gene3317;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11 NC_014029.1 RefSeq gene 3589099 3590550 . - . ID=gene3318;Name=YPZ3_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16620;old_locus_tag=YPZ3_2793 NC_014029.1 Protein Homology CDS 3589099 3590550 . - 0 ID=cds3265;Parent=gene3318;Dbxref=Genbank:WP_002208658.1;Name=WP_002208658.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_002208658.1;transl_table=11 NC_014029.1 RefSeq gene 3590648 3590818 . - . ID=gene3319;Name=YPZ3_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16625 NC_014029.1 Protein Homology CDS 3590648 3590818 . - 0 ID=cds3266;Parent=gene3319;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11 NC_014029.1 RefSeq gene 3590900 3591154 . + . ID=gene3320;Name=YPZ3_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16630 NC_014029.1 Protein Homology CDS 3590900 3591154 . + 0 ID=cds3267;Parent=gene3320;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11 NC_014029.1 RefSeq gene 3591159 3592079 . + . ID=gene3321;Name=YPZ3_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16635;old_locus_tag=YPZ3_2794 NC_014029.1 Protein Homology CDS 3591159 3592079 . + 0 ID=cds3268;Parent=gene3321;Dbxref=Genbank:WP_002208661.1;Name=WP_002208661.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_002208661.1;transl_table=11 NC_014029.1 RefSeq gene 3592235 3594094 . + . ID=gene3322;Name=YPZ3_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16640;old_locus_tag=YPZ3_2795 NC_014029.1 Protein Homology CDS 3592235 3594094 . + 0 ID=cds3269;Parent=gene3322;Dbxref=Genbank:WP_002208662.1;Name=WP_002208662.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_002208662.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3594161 3594883 . + . ID=id259;gbkey=repeat_region NC_014029.1 RefSeq gene 3594273 3594731 . - . ID=gene3323;Name=YPZ3_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16645;old_locus_tag=YPZ3_2796 NC_014029.1 Protein Homology CDS 3594273 3594731 . - 0 ID=cds3270;Parent=gene3323;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 3594721 3594885 . - . ID=gene3324;Name=YPZ3_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16650 NC_014029.1 Protein Homology CDS 3594721 3594885 . - 0 ID=cds3271;Parent=gene3324;Dbxref=Genbank:WP_002217353.1;Name=WP_002217353.1;gbkey=CDS;product=invasin;protein_id=WP_002217353.1;transl_table=11 NC_014029.1 RefSeq gene 3594945 3595430 . - . ID=gene3325;Name=YPZ3_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16655;old_locus_tag=YPZ3_2797 NC_014029.1 Protein Homology CDS 3594945 3595430 . - 0 ID=cds3272;Parent=gene3325;Dbxref=Genbank:WP_002208663.1;Name=WP_002208663.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NC_014029.1 RefSeq gene 3595423 3596412 . - . ID=gene3326;Name=YPZ3_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16660;old_locus_tag=YPZ3_2798 NC_014029.1 Protein Homology CDS 3595423 3596412 . - 0 ID=cds3273;Parent=gene3326;Dbxref=Genbank:WP_002208664.1;Name=WP_002208664.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_002208664.1;transl_table=11 NC_014029.1 RefSeq gene 3596653 3597069 . - . ID=gene3327;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YPZ3_RS16665;old_locus_tag=YPZ3_2799 NC_014029.1 Protein Homology CDS 3596653 3597069 . - 0 ID=cds3274;Parent=gene3327;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11 NC_014029.1 RefSeq gene 3597090 3597560 . - . ID=gene3328;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YPZ3_RS16670;old_locus_tag=YPZ3_2800 NC_014029.1 Protein Homology CDS 3597090 3597560 . - 0 ID=cds3275;Parent=gene3328;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NC_014029.1 RefSeq gene 3597696 3598805 . - . ID=gene3329;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YPZ3_RS16675;old_locus_tag=YPZ3_2801 NC_014029.1 Protein Homology CDS 3597696 3598805 . - 0 ID=cds3276;Parent=gene3329;Dbxref=Genbank:WP_002208667.1;Name=WP_002208667.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_002208667.1;transl_table=11 NC_014029.1 RefSeq gene 3598955 3599404 . - . ID=gene3330;Name=YPZ3_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16680;old_locus_tag=YPZ3_2802 NC_014029.1 Protein Homology CDS 3598955 3599404 . - 0 ID=cds3277;Parent=gene3330;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11 NC_014029.1 RefSeq gene 3599475 3600068 . - . ID=gene3331;Name=YPZ3_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16685;old_locus_tag=YPZ3_2803 NC_014029.1 Protein Homology CDS 3599475 3600068 . - 0 ID=cds3278;Parent=gene3331;Dbxref=Genbank:WP_002217141.1;Name=WP_002217141.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217141.1;transl_table=11 NC_014029.1 RefSeq gene 3600101 3600796 . - . ID=gene3332;Name=YPZ3_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16690;old_locus_tag=YPZ3_2804 NC_014029.1 Protein Homology CDS 3600101 3600796 . - 0 ID=cds3279;Parent=gene3332;Dbxref=Genbank:WP_002217139.1;Name=WP_002217139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217139.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3600981 3601702 . + . ID=id260;gbkey=repeat_region NC_014029.1 RefSeq gene 3601094 3601603 . - . ID=gene3333;Name=YPZ3_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16695;old_locus_tag=YPZ3_2805 NC_014029.1 Protein Homology CDS 3601094 3601603 . - 0 ID=cds3280;Parent=gene3333;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11 NC_014029.1 RefSeq gene 3601759 3602727 . - . ID=gene3334;Name=YPZ3_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16700;old_locus_tag=YPZ3_2806 NC_014029.1 Protein Homology CDS 3601759 3602727 . - 0 ID=cds3281;Parent=gene3334;Dbxref=Genbank:WP_002208669.1;Name=WP_002208669.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NC_014029.1 RefSeq gene 3602738 3604552 . - . ID=gene3335;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YPZ3_RS16705;old_locus_tag=YPZ3_2807 NC_014029.1 Protein Homology CDS 3602738 3604552 . - 0 ID=cds3282;Parent=gene3335;Dbxref=Genbank:WP_002354695.1;Name=WP_002354695.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_002354695.1;transl_table=11 NC_014029.1 RefSeq gene 3604613 3604948 . - . ID=gene3336;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YPZ3_RS16710;old_locus_tag=YPZ3_2808 NC_014029.1 Protein Homology CDS 3604613 3604948 . - 0 ID=cds3283;Parent=gene3336;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NC_014029.1 RefSeq gene 3605060 3606184 . - . ID=gene3337;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YPZ3_RS16715;old_locus_tag=YPZ3_2809 NC_014029.1 Protein Homology CDS 3605060 3606184 . - 0 ID=cds3284;Parent=gene3337;Dbxref=Genbank:WP_002208672.1;Name=WP_002208672.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_002208672.1;transl_table=11 NC_014029.1 RefSeq gene 3606277 3607347 . - . ID=gene3338;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YPZ3_RS16720;old_locus_tag=YPZ3_2810 NC_014029.1 Protein Homology CDS 3606277 3607347 . - 0 ID=cds3285;Parent=gene3338;Dbxref=Genbank:WP_002208673.1;Name=WP_002208673.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_002208673.1;transl_table=11 NC_014029.1 RefSeq gene 3607550 3608131 . + . ID=gene3339;Name=YPZ3_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16725;old_locus_tag=YPZ3_2811 NC_014029.1 Protein Homology CDS 3607550 3608131 . + 0 ID=cds3286;Parent=gene3339;Dbxref=Genbank:WP_002216927.1;Name=WP_002216927.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_002216927.1;transl_table=11 NC_014029.1 RefSeq gene 3608430 3609032 . + . ID=gene3340;Name=YPZ3_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16730;old_locus_tag=YPZ3_2812 NC_014029.1 Protein Homology CDS 3608430 3609032 . + 0 ID=cds3287;Parent=gene3340;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3609094 3609816 . + . ID=id261;gbkey=repeat_region NC_014029.1 RefSeq gene 3609247 3609705 . + . ID=gene3341;Name=YPZ3_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16735;old_locus_tag=YPZ3_2813 NC_014029.1 Protein Homology CDS 3609247 3609705 . + 0 ID=cds3288;Parent=gene3341;Dbxref=Genbank:WP_041176128.1;Name=WP_041176128.1;gbkey=CDS;product=transposase;protein_id=WP_041176128.1;transl_table=11 NC_014029.1 RefSeq gene 3609833 3609964 . - . ID=gene3342;Name=YPZ3_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16740 NC_014029.1 Protein Homology CDS 3609833 3609964 . - 0 ID=cds3289;Parent=gene3342;Dbxref=Genbank:WP_002216930.1;Name=WP_002216930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216930.1;transl_table=11 NC_014029.1 RefSeq gene 3610133 3610387 . + . ID=gene3343;Name=YPZ3_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16745 NC_014029.1 Protein Homology CDS 3610133 3610387 . + 0 ID=cds3290;Parent=gene3343;Dbxref=Genbank:WP_002216934.1;Name=WP_002216934.1;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=WP_002216934.1;transl_table=11 NC_014029.1 RefSeq gene 3610384 3611898 . + . ID=gene3344;Name=YPZ3_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16750;old_locus_tag=YPZ3_2814 NC_014029.1 Protein Homology CDS 3610384 3611898 . + 0 ID=cds3291;Parent=gene3344;Dbxref=Genbank:WP_002216937.1;Name=WP_002216937.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_002216937.1;transl_table=11 NC_014029.1 RefSeq gene 3612106 3612786 . - . ID=gene3345;Name=YPZ3_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16755;old_locus_tag=YPZ3_2815 NC_014029.1 Protein Homology CDS 3612106 3612786 . - 0 ID=cds3292;Parent=gene3345;Dbxref=Genbank:WP_002208677.1;Name=WP_002208677.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002208677.1;transl_table=11 NC_014029.1 RefSeq gene 3612941 3614770 . - . ID=gene3346;Name=YPZ3_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16760;old_locus_tag=YPZ3_2816 NC_014029.1 Protein Homology CDS 3612941 3614770 . - 0 ID=cds3293;Parent=gene3346;Dbxref=Genbank:WP_002208678.1;Name=WP_002208678.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_002208678.1;transl_table=11 NC_014029.1 RefSeq gene 3615331 3616722 . - . ID=gene3347;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPZ3_RS16765;old_locus_tag=YPZ3_2817 NC_014029.1 Protein Homology CDS 3615331 3616722 . - 0 ID=cds3294;Parent=gene3347;Dbxref=Genbank:WP_002223269.1;Name=WP_002223269.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002223269.1;transl_table=11 NC_014029.1 RefSeq gene 3616798 3618117 . - . ID=gene3348;Name=YPZ3_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16770;old_locus_tag=YPZ3_2818 NC_014029.1 Protein Homology CDS 3616798 3618117 . - 0 ID=cds3295;Parent=gene3348;Dbxref=Genbank:WP_002208680.1;Name=WP_002208680.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_002208680.1;transl_table=11 NC_014029.1 RefSeq gene 3618591 3619655 . - . ID=gene3349;Name=YPZ3_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16775;old_locus_tag=YPZ3_2819 NC_014029.1 Protein Homology CDS 3618591 3619655 . - 0 ID=cds3296;Parent=gene3349;Dbxref=Genbank:WP_002215524.1;Name=WP_002215524.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215524.1;transl_table=11 NC_014029.1 RefSeq gene 3619677 3620993 . - . ID=gene3350;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YPZ3_RS16780;old_locus_tag=YPZ3_2820 NC_014029.1 Protein Homology CDS 3619677 3620993 . - 0 ID=cds3297;Parent=gene3350;Dbxref=Genbank:WP_002208684.1;Name=WP_002208684.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_002208684.1;transl_table=11 NC_014029.1 RefSeq gene 3621018 3621707 . - . ID=gene3351;Name=YPZ3_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16785;old_locus_tag=YPZ3_2821 NC_014029.1 Protein Homology CDS 3621018 3621707 . - 0 ID=cds3298;Parent=gene3351;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11 NC_014029.1 RefSeq gene 3621737 3621856 . - . ID=gene3352;Name=YPZ3_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16790 NC_014029.1 Protein Homology CDS 3621737 3621856 . - 0 ID=cds3299;Parent=gene3352;Dbxref=Genbank:WP_002208686.1;Name=WP_002208686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208686.1;transl_table=11 NC_014029.1 RefSeq gene 3621975 3623219 . + . ID=gene3353;Name=YPZ3_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16795;old_locus_tag=YPZ3_2822 NC_014029.1 Protein Homology CDS 3621975 3623219 . + 0 ID=cds3300;Parent=gene3353;Dbxref=Genbank:WP_002208687.1;Name=WP_002208687.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease SbcD;protein_id=WP_002208687.1;transl_table=11 NC_014029.1 RefSeq gene 3623216 3626905 . + . ID=gene3354;Name=YPZ3_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16800;old_locus_tag=YPZ3_2823 NC_014029.1 Protein Homology CDS 3623216 3626905 . + 0 ID=cds3301;Parent=gene3354;Dbxref=Genbank:WP_002223265.1;Name=WP_002223265.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_002223265.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3627033 3627157 . + . ID=id262;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 3627159 3627452 . + . ID=id263;gbkey=repeat_region NC_014029.1 RefSeq gene 3627507 3628421 . - . ID=gene3355;Name=YPZ3_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16805;old_locus_tag=YPZ3_2824 NC_014029.1 Protein Homology CDS 3627507 3628421 . - 0 ID=cds3302;Parent=gene3355;Dbxref=Genbank:WP_002208690.1;Name=WP_002208690.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_002208690.1;transl_table=11 NC_014029.1 RefSeq gene 3628754 3629665 . + . ID=gene3356;Name=YPZ3_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16810;old_locus_tag=YPZ3_2825 NC_014029.1 Protein Homology CDS 3628754 3629665 . + 0 ID=cds3303;Parent=gene3356;Dbxref=Genbank:WP_002208691.1;Name=WP_002208691.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NC_014029.1 RefSeq gene 3629901 3630188 . - . ID=gene3357;Name=YPZ3_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16815 NC_014029.1 Protein Homology CDS 3629901 3630188 . - 0 ID=cds3304;Parent=gene3357;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11 NC_014029.1 RefSeq gene 3630252 3630422 . - . ID=gene3358;Name=YPZ3_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16820 NC_014029.1 Protein Homology CDS 3630252 3630422 . - 0 ID=cds3305;Parent=gene3358;Dbxref=Genbank:WP_002215533.1;Name=WP_002215533.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215533.1;transl_table=11 NC_014029.1 RefSeq gene 3630678 3631202 . - . ID=gene3359;Name=YPZ3_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16825;old_locus_tag=YPZ3_2826 NC_014029.1 Protein Homology CDS 3630678 3631202 . - 0 ID=cds3306;Parent=gene3359;Dbxref=Genbank:WP_002208693.1;Name=WP_002208693.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_002208693.1;transl_table=11 NC_014029.1 RefSeq gene 3631449 3632006 . - . ID=gene3360;Name=YPZ3_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16830;old_locus_tag=YPZ3_2827 NC_014029.1 Protein Homology CDS 3631449 3632006 . - 0 ID=cds3307;Parent=gene3360;Dbxref=Genbank:WP_002208694.1;Name=WP_002208694.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208694.1;transl_table=11 NC_014029.1 RefSeq gene 3632274 3632489 . + . ID=gene3361;Name=YPZ3_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16835 NC_014029.1 Protein Homology CDS 3632274 3632489 . + 0 ID=cds3308;Parent=gene3361;Dbxref=Genbank:WP_002215536.1;Name=WP_002215536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215536.1;transl_table=11 NC_014029.1 RefSeq gene 3632736 3633299 . - . ID=gene3362;Name=YPZ3_RS16840;end_range=3633299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS16840;old_locus_tag=YPZ3_2828;partial=true;pseudo=true NC_014029.1 Protein Homology CDS 3632736 3633299 . - 0 ID=cds3309;Parent=gene3362;end_range=3633299,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3633503 3633757 . - . ID=gene3363;Name=YPZ3_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16845 NC_014029.1 Protein Homology CDS 3633503 3633757 . - 0 ID=cds3310;Parent=gene3363;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11 NC_014029.1 RefSeq gene 3633955 3634704 . - . ID=gene3364;Name=YPZ3_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16850;old_locus_tag=YPZ3_2829 NC_014029.1 Protein Homology CDS 3633955 3634704 . - 0 ID=cds3311;Parent=gene3364;Dbxref=Genbank:WP_002264519.1;Name=WP_002264519.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_002264519.1;transl_table=11 NC_014029.1 RefSeq gene 3635041 3636300 . - . ID=gene3365;Name=YPZ3_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16855;old_locus_tag=YPZ3_2830 NC_014029.1 Protein Homology CDS 3635041 3636300 . - 0 ID=cds3312;Parent=gene3365;Dbxref=Genbank:WP_002208700.1;Name=WP_002208700.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_002208700.1;transl_table=11 NC_014029.1 RefSeq gene 3636310 3637413 . - . ID=gene3366;Name=YPZ3_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16860;old_locus_tag=YPZ3_2831 NC_014029.1 Protein Homology CDS 3636310 3637413 . - 0 ID=cds3313;Parent=gene3366;Dbxref=Genbank:WP_002208701.1;Name=WP_002208701.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NC_014029.1 RefSeq gene 3637590 3637991 . - . ID=gene3367;Name=YPZ3_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16865;old_locus_tag=YPZ3_2832 NC_014029.1 Protein Homology CDS 3637590 3637991 . - 0 ID=cds3314;Parent=gene3367;Dbxref=Genbank:WP_002208702.1;Name=WP_002208702.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NC_014029.1 RefSeq gene 3638051 3639298 . - . ID=gene3368;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YPZ3_RS16870;old_locus_tag=YPZ3_2833 NC_014029.1 Protein Homology CDS 3638051 3639298 . - 0 ID=cds3315;Parent=gene3368;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11 NC_014029.1 RefSeq gene 3639425 3639883 . - . ID=gene3369;Name=YPZ3_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16875;old_locus_tag=YPZ3_2834 NC_014029.1 Protein Homology CDS 3639425 3639883 . - 0 ID=cds3316;Parent=gene3369;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NC_014029.1 RefSeq gene 3640310 3640615 . + . ID=gene3370;Name=YPZ3_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16880 NC_014029.1 Protein Homology CDS 3640310 3640615 . + 0 ID=cds3317;Parent=gene3370;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11 NC_014029.1 RefSeq gene 3640812 3642416 . + . ID=gene3371;Name=YPZ3_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16885;old_locus_tag=YPZ3_2835 NC_014029.1 Protein Homology CDS 3640812 3642416 . + 0 ID=cds3318;Parent=gene3371;Dbxref=Genbank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;product=chitin-binding domain protein;protein_id=WP_002208705.1;transl_table=11 NC_014029.1 RefSeq gene 3642876 3643661 . - . ID=gene3372;Name=YPZ3_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16890;old_locus_tag=YPZ3_2836 NC_014029.1 Protein Homology CDS 3642876 3643661 . - 0 ID=cds3319;Parent=gene3372;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11 NC_014029.1 RefSeq gene 3644509 3644664 . - . ID=gene3373;Name=YPZ3_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16895 NC_014029.1 Protein Homology CDS 3644509 3644664 . - 0 ID=cds3320;Parent=gene3373;Dbxref=Genbank:WP_002216045.1;Name=WP_002216045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216045.1;transl_table=11 NC_014029.1 RefSeq gene 3645662 3647122 . + . ID=gene3374;Name=YPZ3_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16900;old_locus_tag=YPZ3_2837 NC_014029.1 Protein Homology CDS 3645662 3647122 . + 0 ID=cds3321;Parent=gene3374;Dbxref=Genbank:WP_002208707.1;Name=WP_002208707.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_002208707.1;transl_table=11 NC_014029.1 RefSeq gene 3647236 3648294 . - . ID=gene3375;Name=YPZ3_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16905;old_locus_tag=YPZ3_2838 NC_014029.1 Protein Homology CDS 3647236 3648294 . - 0 ID=cds3322;Parent=gene3375;Dbxref=Genbank:WP_002208708.1;Name=WP_002208708.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_002208708.1;transl_table=11 NC_014029.1 RefSeq gene 3648650 3649597 . + . ID=gene3376;Name=YPZ3_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16910;old_locus_tag=YPZ3_2839 NC_014029.1 Protein Homology CDS 3648650 3649597 . + 0 ID=cds3323;Parent=gene3376;Dbxref=Genbank:WP_002208709.1;Name=WP_002208709.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002208709.1;transl_table=11 NC_014029.1 RefSeq gene 3649841 3650068 . - . ID=gene3377;Name=YPZ3_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16915 NC_014029.1 Protein Homology CDS 3649841 3650068 . - 0 ID=cds3324;Parent=gene3377;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11 NC_014029.1 RefSeq gene 3650081 3651076 . - . ID=gene3378;Name=YPZ3_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16920;old_locus_tag=YPZ3_2840 NC_014029.1 Protein Homology CDS 3650081 3651076 . - 0 ID=cds3325;Parent=gene3378;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11 NC_014029.1 RefSeq gene 3651144 3652367 . - . ID=gene3379;Name=YPZ3_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16925;old_locus_tag=YPZ3_2841 NC_014029.1 Protein Homology CDS 3651144 3652367 . - 0 ID=cds3326;Parent=gene3379;Dbxref=Genbank:WP_002208711.1;Name=WP_002208711.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_002208711.1;transl_table=11 NC_014029.1 RefSeq gene 3652383 3652979 . - . ID=gene3380;Name=YPZ3_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16930;old_locus_tag=YPZ3_2842 NC_014029.1 Protein Homology CDS 3652383 3652979 . - 0 ID=cds3327;Parent=gene3380;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11 NC_014029.1 RefSeq gene 3652986 3653615 . - . ID=gene3381;Name=YPZ3_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16935;old_locus_tag=YPZ3_2843 NC_014029.1 Protein Homology CDS 3652986 3653615 . - 0 ID=cds3328;Parent=gene3381;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11 NC_014029.1 RefSeq gene 3653608 3654408 . - . ID=gene3382;Name=YPZ3_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16940;old_locus_tag=YPZ3_2844 NC_014029.1 Protein Homology CDS 3653608 3654408 . - 0 ID=cds3329;Parent=gene3382;Dbxref=Genbank:WP_002208715.1;Name=WP_002208715.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_002208715.1;transl_table=11 NC_014029.1 RefSeq gene 3654398 3655639 . - . ID=gene3383;Name=YPZ3_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16945;old_locus_tag=YPZ3_2845 NC_014029.1 Protein Homology CDS 3654398 3655639 . - 0 ID=cds3330;Parent=gene3383;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11 NC_014029.1 RefSeq gene 3655643 3656986 . - . ID=gene3384;Name=YPZ3_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16950;old_locus_tag=YPZ3_2846 NC_014029.1 Protein Homology CDS 3655643 3656986 . - 0 ID=cds3331;Parent=gene3384;Dbxref=Genbank:WP_002208717.1;Name=WP_002208717.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11 NC_014029.1 RefSeq gene 3657482 3658222 . + . ID=gene3385;Name=YPZ3_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16955;old_locus_tag=YPZ3_2847 NC_014029.1 Protein Homology CDS 3657482 3658222 . + 0 ID=cds3332;Parent=gene3385;Dbxref=Genbank:WP_002208718.1;Name=WP_002208718.1;gbkey=CDS;product=transpeptidase;protein_id=WP_002208718.1;transl_table=11 NC_014029.1 RefSeq gene 3658187 3658960 . - . ID=gene3386;Name=YPZ3_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16960;old_locus_tag=YPZ3_2848 NC_014029.1 Protein Homology CDS 3658187 3658960 . - 0 ID=cds3333;Parent=gene3386;Dbxref=Genbank:WP_002208719.1;Name=WP_002208719.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NC_014029.1 RefSeq gene 3659163 3659744 . - . ID=gene3387;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=YPZ3_RS16965;old_locus_tag=YPZ3_2849 NC_014029.1 Protein Homology CDS 3659163 3659744 . - 0 ID=cds3334;Parent=gene3387;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11 NC_014029.1 RefSeq gene 3659984 3662431 . + . ID=gene3388;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YPZ3_RS16970;old_locus_tag=YPZ3_2850 NC_014029.1 Protein Homology CDS 3659984 3662431 . + 0 ID=cds3335;Parent=gene3388;Dbxref=Genbank:WP_002214691.1;Name=WP_002214691.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_002214691.1;transl_table=11 NC_014029.1 RefSeq gene 3662603 3663349 . - . ID=gene3389;Name=YPZ3_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16975;old_locus_tag=YPZ3_2851 NC_014029.1 Protein Homology CDS 3662603 3663349 . - 0 ID=cds3336;Parent=gene3389;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NC_014029.1 RefSeq gene 3663351 3665204 . - . ID=gene3390;Name=YPZ3_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16980;old_locus_tag=YPZ3_2852 NC_014029.1 Protein Homology CDS 3663351 3665204 . - 0 ID=cds3337;Parent=gene3390;Dbxref=Genbank:WP_002208722.1;Name=WP_002208722.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002208722.1;transl_table=11 NC_014029.1 RefSeq gene 3665359 3671091 . - . ID=gene3391;Name=YPZ3_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16985;old_locus_tag=YPZ3_2853 NC_014029.1 Protein Homology CDS 3665359 3671091 . - 0 ID=cds3338;Parent=gene3391;Dbxref=Genbank:WP_002224962.1;Name=WP_002224962.1;gbkey=CDS;product=adhesin;protein_id=WP_002224962.1;transl_table=11 NC_014029.1 RefSeq gene 3671132 3672922 . - . ID=gene3392;Name=YPZ3_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16990;old_locus_tag=YPZ3_2854 NC_014029.1 Protein Homology CDS 3671132 3672922 . - 0 ID=cds3339;Parent=gene3392;Dbxref=Genbank:WP_002214693.1;Name=WP_002214693.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002214693.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3673649 3673828 . + . ID=id264;gbkey=repeat_region NC_014029.1 RefSeq gene 3674011 3675303 . - . ID=gene3393;Name=YPZ3_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS16995;old_locus_tag=YPZ3_2855 NC_014029.1 Protein Homology CDS 3674011 3675303 . - 0 ID=cds3340;Parent=gene3393;Dbxref=Genbank:WP_002208729.1;Name=WP_002208729.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_002208729.1;transl_table=11 NC_014029.1 RefSeq gene 3675303 3675761 . - . ID=gene3394;Name=YPZ3_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17000;old_locus_tag=YPZ3_2856 NC_014029.1 Protein Homology CDS 3675303 3675761 . - 0 ID=cds3341;Parent=gene3394;Dbxref=Genbank:WP_002208730.1;Name=WP_002208730.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_002208730.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3675741 3677700 . + . ID=id265;gbkey=repeat_region NC_014029.1 RefSeq gene 3675831 3676853 . + . ID=gene3395;Name=YPZ3_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17005;old_locus_tag=YPZ3_2857 NC_014029.1 Protein Homology CDS 3675831 3676853 . + 0 ID=cds3342;Parent=gene3395;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 3676853 3677632 . + . ID=gene3396;Name=YPZ3_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17010;old_locus_tag=YPZ3_2858 NC_014029.1 Protein Homology CDS 3676853 3677632 . + 0 ID=cds3343;Parent=gene3396;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 3677683 3678606 . - . ID=gene3397;Name=YPZ3_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17015;old_locus_tag=YPZ3_2859 NC_014029.1 Protein Homology CDS 3677683 3678606 . - 0 ID=cds3344;Parent=gene3397;Dbxref=Genbank:WP_002208731.1;Name=WP_002208731.1;gbkey=CDS;product=purine catabolism protein PucG;protein_id=WP_002208731.1;transl_table=11 NC_014029.1 RefSeq gene 3678638 3679384 . - . ID=gene3398;Name=YPZ3_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17020;old_locus_tag=YPZ3_2860 NC_014029.1 Protein Homology CDS 3678638 3679384 . - 0 ID=cds3345;Parent=gene3398;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NC_014029.1 RefSeq gene 3679365 3680018 . - . ID=gene3399;Name=YPZ3_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17025;old_locus_tag=YPZ3_2861 NC_014029.1 Protein Homology CDS 3679365 3680018 . - 0 ID=cds3346;Parent=gene3399;Dbxref=Genbank:WP_002208733.1;Name=WP_002208733.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002208733.1;transl_table=11 NC_014029.1 RefSeq gene 3680015 3680683 . - . ID=gene3400;Name=YPZ3_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17030;old_locus_tag=YPZ3_2862 NC_014029.1 Protein Homology CDS 3680015 3680683 . - 0 ID=cds3347;Parent=gene3400;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NC_014029.1 RefSeq gene 3680696 3681484 . - . ID=gene3401;Name=YPZ3_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17035;old_locus_tag=YPZ3_2863 NC_014029.1 Protein Homology CDS 3680696 3681484 . - 0 ID=cds3348;Parent=gene3401;Dbxref=Genbank:WP_002208735.1;Name=WP_002208735.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002208735.1;transl_table=11 NC_014029.1 RefSeq gene 3681595 3681810 . - . ID=gene3402;Name=YPZ3_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17040 NC_014029.1 Protein Homology CDS 3681595 3681810 . - 0 ID=cds3349;Parent=gene3402;Dbxref=Genbank:WP_002215957.1;Name=WP_002215957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215957.1;transl_table=11 NC_014029.1 RefSeq gene 3681812 3682645 . - . ID=gene3403;Name=YPZ3_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17045;old_locus_tag=YPZ3_2864 NC_014029.1 Protein Homology CDS 3681812 3682645 . - 0 ID=cds3350;Parent=gene3403;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NC_014029.1 RefSeq gene 3682955 3683158 . + . ID=gene3404;Name=YPZ3_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17050 NC_014029.1 Protein Homology CDS 3682955 3683158 . + 0 ID=cds3351;Parent=gene3404;Dbxref=Genbank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208738.1;transl_table=11 NC_014029.1 RefSeq gene 3683155 3684552 . + . ID=gene3405;Name=YPZ3_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17055;old_locus_tag=YPZ3_2865 NC_014029.1 Protein Homology CDS 3683155 3684552 . + 0 ID=cds3352;Parent=gene3405;Dbxref=Genbank:WP_002208739.1;Name=WP_002208739.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_002208739.1;transl_table=11 NC_014029.1 RefSeq gene 3684662 3685048 . + . ID=gene3406;Name=YPZ3_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17060;old_locus_tag=YPZ3_2866 NC_014029.1 Protein Homology CDS 3684662 3685048 . + 0 ID=cds3353;Parent=gene3406;Dbxref=Genbank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002264506.1;transl_table=11 NC_014029.1 RefSeq gene 3685276 3686475 . + . ID=gene3407;Name=YPZ3_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17065;old_locus_tag=YPZ3_2867 NC_014029.1 Protein Homology CDS 3685276 3686475 . + 0 ID=cds3354;Parent=gene3407;Dbxref=Genbank:WP_002208741.1;Name=WP_002208741.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002208741.1;transl_table=11 NC_014029.1 RefSeq gene 3686635 3687408 . + . ID=gene3408;Name=YPZ3_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17070;old_locus_tag=YPZ3_2868 NC_014029.1 Protein Homology CDS 3686635 3687408 . + 0 ID=cds3355;Parent=gene3408;Dbxref=Genbank:WP_002208742.1;Name=WP_002208742.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002208742.1;transl_table=11 NC_014029.1 RefSeq gene 3687405 3687746 . + . ID=gene3409;Name=YPZ3_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17075;old_locus_tag=YPZ3_2869 NC_014029.1 Protein Homology CDS 3687405 3687746 . + 0 ID=cds3356;Parent=gene3409;Dbxref=Genbank:WP_002208743.1;Name=WP_002208743.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002208743.1;transl_table=11 NC_014029.1 RefSeq gene 3687918 3688430 . + . ID=gene3410;Name=YPZ3_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17080;old_locus_tag=YPZ3_2870 NC_014029.1 Protein Homology CDS 3687918 3688430 . + 0 ID=cds3357;Parent=gene3410;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11 NC_014029.1 RefSeq gene 3688814 3689986 . + . ID=gene3411;Name=YPZ3_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17085;old_locus_tag=YPZ3_2871 NC_014029.1 Protein Homology CDS 3688814 3689986 . + 0 ID=cds3358;Parent=gene3411;Dbxref=Genbank:WP_002208745.1;Name=WP_002208745.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein A;protein_id=WP_002208745.1;transl_table=11 NC_014029.1 RefSeq gene 3690025 3691560 . + . ID=gene3412;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YPZ3_RS17090;old_locus_tag=YPZ3_2872 NC_014029.1 Protein Homology CDS 3690025 3691560 . + 0 ID=cds3359;Parent=gene3412;Dbxref=Genbank:WP_002208746.1;Name=WP_002208746.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NC_014029.1 RefSeq gene 3691683 3692849 . - . ID=gene3413;Name=YPZ3_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17095;old_locus_tag=YPZ3_2873 NC_014029.1 Protein Homology CDS 3691683 3692849 . - 0 ID=cds3360;Parent=gene3413;Dbxref=Genbank:WP_002208747.1;Name=WP_002208747.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208747.1;transl_table=11 NC_014029.1 RefSeq gene 3693101 3693538 . + . ID=gene3414;Name=YPZ3_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17100;old_locus_tag=YPZ3_2874 NC_014029.1 Protein Homology CDS 3693101 3693538 . + 0 ID=cds3361;Parent=gene3414;Dbxref=Genbank:WP_002216643.1;Name=WP_002216643.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002216643.1;transl_table=11 NC_014029.1 RefSeq gene 3693708 3694457 . + . ID=gene3415;Name=YPZ3_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17105;old_locus_tag=YPZ3_2875 NC_014029.1 Protein Homology CDS 3693708 3694457 . + 0 ID=cds3362;Parent=gene3415;Dbxref=Genbank:WP_002208749.1;Name=WP_002208749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208749.1;transl_table=11 NC_014029.1 RefSeq gene 3694500 3697142 . + . ID=gene3416;Name=YPZ3_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17110;old_locus_tag=YPZ3_2876 NC_014029.1 Protein Homology CDS 3694500 3697142 . + 0 ID=cds3363;Parent=gene3416;Dbxref=Genbank:WP_002208750.1;Name=WP_002208750.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208750.1;transl_table=11 NC_014029.1 RefSeq gene 3697318 3698673 . + . ID=gene3417;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YPZ3_RS17115;old_locus_tag=YPZ3_2877 NC_014029.1 Protein Homology CDS 3697318 3698673 . + 0 ID=cds3364;Parent=gene3417;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11 NC_014029.1 RefSeq gene 3698735 3699076 . + . ID=gene3418;Name=YPZ3_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17120;old_locus_tag=YPZ3_2878 NC_014029.1 Protein Homology CDS 3698735 3699076 . + 0 ID=cds3365;Parent=gene3418;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11 NC_014029.1 RefSeq gene 3699185 3699376 . - . ID=gene3419;Name=YPZ3_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17125 NC_014029.1 Protein Homology CDS 3699185 3699376 . - 0 ID=cds3366;Parent=gene3419;Dbxref=Genbank:WP_002360510.1;Name=WP_002360510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002360510.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3699201 3699315 . + . ID=id266;gbkey=repeat_region NC_014029.1 RefSeq repeat_region 3699332 3705037 . + . ID=id267;gbkey=repeat_region NC_014029.1 RefSeq gene 3699464 3699579 . - . ID=gene3420;Name=YPZ3_RS17130;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS17130;old_locus_tag=YPZ3_r8 NC_014029.1 cmsearch rRNA 3699464 3699579 . - . ID=rna49;Parent=gene3420;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 cmsearch exon 3699464 3699579 . - . ID=id268;Parent=rna49;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 RefSeq gene 3699671 3702604 . - . ID=gene3421;Name=YPZ3_RS17135;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS17135;old_locus_tag=YPZ3_r9 NC_014029.1 RefSeq rRNA 3699671 3702604 . - . ID=rna50;Parent=gene3421;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq exon 3699671 3702604 . - . ID=id269;Parent=rna50;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq gene 3702848 3702923 . - . ID=gene3422;Name=YPZ3_RS17140;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS17140;old_locus_tag=YPZ3_t44 NC_014029.1 tRNAscan-SE tRNA 3702848 3702923 . - . ID=rna51;Parent=gene3422;anticodon=(pos:complement(3702887..3702889));gbkey=tRNA;product=tRNA-Glu NC_014029.1 tRNAscan-SE exon 3702848 3702923 . - . ID=id270;Parent=rna51;anticodon=(pos:complement(3702887..3702889));gbkey=tRNA;product=tRNA-Glu NC_014029.1 RefSeq gene 3703057 3704605 . - . ID=gene3423;Name=YPZ3_RS17145;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS17145;old_locus_tag=YPZ3_r10 NC_014029.1 RefSeq rRNA 3703057 3704605 . - . ID=rna52;Parent=gene3423;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq exon 3703057 3704605 . - . ID=id271;Parent=rna52;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq gene 3705119 3707692 . - . ID=gene3424;Name=YPZ3_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17155;old_locus_tag=YPZ3_2880 NC_014029.1 Protein Homology CDS 3705119 3707692 . - 0 ID=cds3367;Parent=gene3424;Dbxref=Genbank:WP_002217405.1;Name=WP_002217405.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_002217405.1;transl_table=11 NC_014029.1 RefSeq gene 3707822 3708553 . - . ID=gene3425;Name=YPZ3_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17160;old_locus_tag=YPZ3_2881 NC_014029.1 Protein Homology CDS 3707822 3708553 . - 0 ID=cds3368;Parent=gene3425;Dbxref=Genbank:WP_002209471.1;Name=WP_002209471.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209471.1;transl_table=11 NC_014029.1 RefSeq gene 3708555 3709532 . - . ID=gene3426;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YPZ3_RS17165;old_locus_tag=YPZ3_2882 NC_014029.1 Protein Homology CDS 3708555 3709532 . - 0 ID=cds3369;Parent=gene3426;Dbxref=Genbank:WP_002209470.1;Name=WP_002209470.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=ribosomal large subunit pseudouridine synthase D;protein_id=WP_002209470.1;transl_table=11 NC_014029.1 RefSeq gene 3709668 3710399 . + . ID=gene3427;Name=YPZ3_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17170;old_locus_tag=YPZ3_2883 NC_014029.1 Protein Homology CDS 3709668 3710399 . + 0 ID=cds3370;Parent=gene3427;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11 NC_014029.1 RefSeq gene 3710754 3711116 . + . ID=gene3428;Name=YPZ3_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17175;old_locus_tag=YPZ3_2884 NC_014029.1 Protein Homology CDS 3710754 3711116 . + 0 ID=cds3371;Parent=gene3428;Dbxref=Genbank:WP_002209468.1;Name=WP_002209468.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_002209468.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3711337 3712057 . + . ID=id272;gbkey=repeat_region NC_014029.1 RefSeq gene 3711447 3711905 . - . ID=gene3429;Name=YPZ3_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17180;old_locus_tag=YPZ3_2885 NC_014029.1 Protein Homology CDS 3711447 3711905 . - 0 ID=cds3372;Parent=gene3429;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3711895 3712053 . - . ID=gene3430;Name=YPZ3_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17185 NC_014029.1 Protein Homology CDS 3711895 3712053 . - 0 ID=cds3373;Parent=gene3430;Dbxref=Genbank:WP_002217797.1;Name=WP_002217797.1;gbkey=CDS;product=invasin;protein_id=WP_002217797.1;transl_table=11 NC_014029.1 RefSeq gene 3712188 3712983 . + . ID=gene3431;Name=pheA;end_range=3712983,.;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=YPZ3_RS17190;old_locus_tag=YPZ3_2886;partial=true;pseudo=true NC_014029.1 Protein Homology CDS 3712188 3712983 . + 0 ID=cds3374;Parent=gene3431;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;end_range=3712983,.;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=pheA;partial=true;product=chorismate mutase;pseudo=true;transl_table=11 NC_014029.1 RefSeq repeat_region 3712944 3714903 . + . ID=id273;gbkey=repeat_region;gene=pheA NC_014029.1 RefSeq gene 3713032 3714054 . + . ID=gene3432;Name=YPZ3_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17195;old_locus_tag=YPZ3_2887 NC_014029.1 Protein Homology CDS 3713032 3714054 . + 0 ID=cds3375;Parent=gene3432;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 3714054 3714833 . + . ID=gene3433;Name=YPZ3_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17200;old_locus_tag=YPZ3_2888 NC_014029.1 Protein Homology CDS 3714054 3714833 . + 0 ID=cds3376;Parent=gene3433;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 3714885 3715304 . + . ID=gene3434;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=YPZ3_RS17205;old_locus_tag=YPZ3_2889;partial=true;pseudo=true;start_range=.,3714885 NC_014029.1 Protein Homology CDS 3714885 3715304 . + 0 ID=cds3377;Parent=gene3434;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;exception=unextendable partial coding region;gbkey=CDS;gene=pheA;partial=true;product=chorismate mutase;pseudo=true;start_range=.,3714885;transl_table=11 NC_014029.1 RefSeq gene 3715409 3716530 . - . ID=gene3435;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YPZ3_RS17210;old_locus_tag=YPZ3_2890 NC_014029.1 Protein Homology CDS 3715409 3716530 . - 0 ID=cds3378;Parent=gene3435;Dbxref=Genbank:WP_002209465.1;Name=WP_002209465.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_002209465.1;transl_table=11 NC_014029.1 RefSeq gene 3716543 3717613 . - . ID=gene3436;Name=YPZ3_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17215;old_locus_tag=YPZ3_2891 NC_014029.1 Protein Homology CDS 3716543 3717613 . - 0 ID=cds3379;Parent=gene3436;Dbxref=Genbank:WP_002228238.1;Name=WP_002228238.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002228238.1;transl_table=11 NC_014029.1 RefSeq gene 3717846 3718562 . + . ID=gene3437;Name=YPZ3_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17220;old_locus_tag=YPZ3_2892 NC_014029.1 Protein Homology CDS 3717846 3718562 . + 0 ID=cds3380;Parent=gene3437;Dbxref=Genbank:WP_002223245.1;Name=WP_002223245.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002223245.1;transl_table=11 NC_014029.1 RefSeq gene 3719054 3719671 . + . ID=gene3438;Name=YPZ3_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17225;old_locus_tag=YPZ3_2893 NC_014029.1 Protein Homology CDS 3719054 3719671 . + 0 ID=cds3381;Parent=gene3438;Dbxref=Genbank:WP_002217484.1;Name=WP_002217484.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217484.1;transl_table=11 NC_014029.1 RefSeq gene 3719740 3720051 . + . ID=gene3439;Name=YPZ3_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17230;old_locus_tag=YPZ3_2894 NC_014029.1 Protein Homology CDS 3719740 3720051 . + 0 ID=cds3382;Parent=gene3439;Dbxref=Genbank:WP_002228328.1;Name=WP_002228328.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228328.1;transl_table=11 NC_014029.1 RefSeq gene 3720039 3720335 . + . ID=gene3440;Name=YPZ3_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17235 NC_014029.1 Protein Homology CDS 3720039 3720335 . + 0 ID=cds3383;Parent=gene3440;Dbxref=Genbank:WP_002217480.1;Name=WP_002217480.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217480.1;transl_table=11 NC_014029.1 RefSeq gene 3720658 3721425 . + . ID=gene3441;Name=YPZ3_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17240;old_locus_tag=YPZ3_2895 NC_014029.1 Protein Homology CDS 3720658 3721425 . + 0 ID=cds3384;Parent=gene3441;Dbxref=Genbank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209462.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3721615 3722338 . + . ID=id274;gbkey=repeat_region NC_014029.1 RefSeq gene 3721728 3722237 . - . ID=gene3442;Name=YPZ3_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17245;old_locus_tag=YPZ3_2896 NC_014029.1 Protein Homology CDS 3721728 3722237 . - 0 ID=cds3385;Parent=gene3442;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11 NC_014029.1 RefSeq gene 3722176 3722331 . - . ID=gene3443;Name=YPZ3_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17250 NC_014029.1 Protein Homology CDS 3722176 3722331 . - 0 ID=cds3386;Parent=gene3443;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 3722398 3722745 . - . ID=gene3444;Name=YPZ3_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17255;old_locus_tag=YPZ3_2897 NC_014029.1 Protein Homology CDS 3722398 3722745 . - 0 ID=cds3387;Parent=gene3444;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NC_014029.1 RefSeq gene 3722826 3723566 . - . ID=gene3445;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YPZ3_RS17260 NC_014029.1 Protein Homology CDS 3722826 3723566 . - 0 ID=cds3388;Parent=gene3445;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11 NC_014029.1 RefSeq gene 3723605 3724153 . - . ID=gene3446;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YPZ3_RS17265;old_locus_tag=YPZ3_2899 NC_014029.1 Protein Homology CDS 3723605 3724153 . - 0 ID=cds3389;Parent=gene3446;Dbxref=Genbank:WP_002209459.1;Name=WP_002209459.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_002209459.1;transl_table=11 NC_014029.1 RefSeq gene 3724175 3724423 . - . ID=gene3447;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YPZ3_RS17270 NC_014029.1 Protein Homology CDS 3724175 3724423 . - 0 ID=cds3390;Parent=gene3447;Dbxref=Genbank:WP_002209458.1;Name=WP_002209458.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NC_014029.1 RefSeq gene 3724651 3726012 . - . ID=gene3448;Name=YPZ3_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17275;old_locus_tag=YPZ3_2900 NC_014029.1 Protein Homology CDS 3724651 3726012 . - 0 ID=cds3391;Parent=gene3448;Dbxref=Genbank:WP_002209456.1;Name=WP_002209456.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_002209456.1;transl_table=11 NC_014029.1 RefSeq gene 3726178 3726969 . + . ID=gene3449;Name=YPZ3_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17280;old_locus_tag=YPZ3_2901 NC_014029.1 Protein Homology CDS 3726178 3726969 . + 0 ID=cds3392;Parent=gene3449;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11 NC_014029.1 RefSeq gene 3727038 3728321 . + . ID=gene3450;Name=YPZ3_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17285;old_locus_tag=YPZ3_2902 NC_014029.1 Protein Homology CDS 3727038 3728321 . + 0 ID=cds3393;Parent=gene3450;Dbxref=Genbank:WP_002209454.1;Name=WP_002209454.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209454.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3728347 3729070 . + . ID=id275;gbkey=repeat_region NC_014029.1 RefSeq gene 3728459 3728917 . - . ID=gene3451;Name=YPZ3_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17290;old_locus_tag=YPZ3_2903 NC_014029.1 Protein Homology CDS 3728459 3728917 . - 0 ID=cds3394;Parent=gene3451;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 3728907 3729080 . - . ID=gene3452;Name=YPZ3_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17295 NC_014029.1 Protein Homology CDS 3728907 3729080 . - 0 ID=cds3395;Parent=gene3452;Dbxref=Genbank:WP_029787775.1;Name=WP_029787775.1;gbkey=CDS;product=transposase;protein_id=WP_029787775.1;transl_table=11 NC_014029.1 RefSeq gene 3729121 3729636 . - . ID=gene3453;Name=YPZ3_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17300;old_locus_tag=YPZ3_2904 NC_014029.1 Protein Homology CDS 3729121 3729636 . - 0 ID=cds3396;Parent=gene3453;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NC_014029.1 RefSeq gene 3729804 3731363 . - . ID=gene3454;Name=YPZ3_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17305;old_locus_tag=YPZ3_2905 NC_014029.1 Protein Homology CDS 3729804 3731363 . - 0 ID=cds3397;Parent=gene3454;Dbxref=Genbank:WP_002228236.1;Name=WP_002228236.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_002228236.1;transl_table=11 NC_014029.1 RefSeq gene 3731446 3731874 . - . ID=gene3455;Name=YPZ3_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17310;old_locus_tag=YPZ3_2906 NC_014029.1 Protein Homology CDS 3731446 3731874 . - 0 ID=cds3398;Parent=gene3455;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11 NC_014029.1 RefSeq gene 3731871 3732437 . - . ID=gene3456;Name=YPZ3_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17315;old_locus_tag=YPZ3_2907 NC_014029.1 Protein Homology CDS 3731871 3732437 . - 0 ID=cds3399;Parent=gene3456;Dbxref=Genbank:WP_002209450.1;Name=WP_002209450.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3732652 3733049 . + . ID=id276;gbkey=repeat_region NC_014029.1 RefSeq gene 3733032 3733108 . - . ID=gene3457;Name=YPZ3_RS17320;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS17320;old_locus_tag=YPZ3_t45 NC_014029.1 tRNAscan-SE tRNA 3733032 3733108 . - . ID=rna53;Parent=gene3457;anticodon=(pos:complement(3733072..3733074));gbkey=tRNA;product=tRNA-Arg NC_014029.1 tRNAscan-SE exon 3733032 3733108 . - . ID=id277;Parent=rna53;anticodon=(pos:complement(3733072..3733074));gbkey=tRNA;product=tRNA-Arg NC_014029.1 RefSeq gene 3733188 3733264 . - . ID=gene3458;Name=YPZ3_RS17325;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS17325;old_locus_tag=YPZ3_t46 NC_014029.1 tRNAscan-SE tRNA 3733188 3733264 . - . ID=rna54;Parent=gene3458;anticodon=(pos:complement(3733228..3733230));gbkey=tRNA;product=tRNA-Arg NC_014029.1 tRNAscan-SE exon 3733188 3733264 . - . ID=id278;Parent=rna54;anticodon=(pos:complement(3733228..3733230));gbkey=tRNA;product=tRNA-Arg NC_014029.1 RefSeq gene 3733322 3733398 . - . ID=gene3459;Name=YPZ3_RS17330;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS17330;old_locus_tag=YPZ3_t47 NC_014029.1 tRNAscan-SE tRNA 3733322 3733398 . - . ID=rna55;Parent=gene3459;anticodon=(pos:complement(3733362..3733364));gbkey=tRNA;product=tRNA-Arg NC_014029.1 tRNAscan-SE exon 3733322 3733398 . - . ID=id279;Parent=rna55;anticodon=(pos:complement(3733362..3733364));gbkey=tRNA;product=tRNA-Arg NC_014029.1 RefSeq gene 3733407 3733499 . - . ID=gene3460;Name=YPZ3_RS17335;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS17335;old_locus_tag=YPZ3_t48 NC_014029.1 tRNAscan-SE tRNA 3733407 3733499 . - . ID=rna56;Parent=gene3460;anticodon=(pos:complement(3733463..3733465));gbkey=tRNA;product=tRNA-Ser NC_014029.1 tRNAscan-SE exon 3733407 3733499 . - . ID=id280;Parent=rna56;anticodon=(pos:complement(3733463..3733465));gbkey=tRNA;product=tRNA-Ser NC_014029.1 RefSeq gene 3733862 3734047 . - . ID=gene3461;Name=YPZ3_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17340 NC_014029.1 Protein Homology CDS 3733862 3734047 . - 0 ID=cds3400;Parent=gene3461;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11 NC_014029.1 RefSeq gene 3734297 3736924 . - . ID=gene3462;Name=YPZ3_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17345;old_locus_tag=YPZ3_2908 NC_014029.1 Protein Homology CDS 3734297 3736924 . - 0 ID=cds3401;Parent=gene3462;Dbxref=Genbank:WP_002209448.1;Name=WP_002209448.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_002209448.1;transl_table=11 NC_014029.1 RefSeq gene 3737064 3737627 . - . ID=gene3463;Name=YPZ3_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17350;old_locus_tag=YPZ3_2909 NC_014029.1 Protein Homology CDS 3737064 3737627 . - 0 ID=cds3402;Parent=gene3463;Dbxref=Genbank:WP_002209447.1;Name=WP_002209447.1;gbkey=CDS;product=regulatory protein RecX;protein_id=WP_002209447.1;transl_table=11 NC_014029.1 RefSeq gene 3737765 3738835 . - . ID=gene3464;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YPZ3_RS17355;old_locus_tag=YPZ3_2910 NC_014029.1 Protein Homology CDS 3737765 3738835 . - 0 ID=cds3403;Parent=gene3464;Dbxref=Genbank:WP_002209446.1;Name=WP_002209446.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_002209446.1;transl_table=11 NC_014029.1 RefSeq gene 3738950 3739438 . - . ID=gene3465;Name=YPZ3_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17360;old_locus_tag=YPZ3_2911 NC_014029.1 Protein Homology CDS 3738950 3739438 . - 0 ID=cds3404;Parent=gene3465;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11 NC_014029.1 RefSeq gene 3739755 3741095 . + . ID=gene3466;Name=YPZ3_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17365;old_locus_tag=YPZ3_2912 NC_014029.1 Protein Homology CDS 3739755 3741095 . + 0 ID=cds3405;Parent=gene3466;Dbxref=Genbank:WP_002209444.1;Name=WP_002209444.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11 NC_014029.1 RefSeq gene 3741343 3742287 . + . ID=gene3467;Name=YPZ3_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17370;old_locus_tag=YPZ3_2913 NC_014029.1 Protein Homology CDS 3741343 3742287 . + 0 ID=cds3406;Parent=gene3467;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NC_014029.1 RefSeq gene 3742279 3742422 . - . ID=gene3468;Name=YPZ3_RS22165;gbkey=Gene;gene_biotype=other;locus_tag=YPZ3_RS22165 NC_014029.1 RefSeq gene 3742509 3743933 . - . ID=gene3469;Name=YPZ3_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17375;old_locus_tag=YPZ3_2914 NC_014029.1 Protein Homology CDS 3742509 3743933 . - 0 ID=cds3407;Parent=gene3469;Dbxref=Genbank:WP_002209441.1;Name=WP_002209441.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_002209441.1;transl_table=11 NC_014029.1 RefSeq gene 3743954 3745441 . - . ID=gene3470;Name=YPZ3_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17380;old_locus_tag=YPZ3_2915 NC_014029.1 Protein Homology CDS 3743954 3745441 . - 0 ID=cds3408;Parent=gene3470;Dbxref=Genbank:WP_002209440.1;Name=WP_002209440.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_002209440.1;transl_table=11 NC_014029.1 RefSeq gene 3745444 3746388 . - . ID=gene3471;Name=YPZ3_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17385;old_locus_tag=YPZ3_2916 NC_014029.1 Protein Homology CDS 3745444 3746388 . - 0 ID=cds3409;Parent=gene3471;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11 NC_014029.1 RefSeq gene 3746381 3747211 . - . ID=gene3472;Name=YPZ3_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17390;old_locus_tag=YPZ3_2917 NC_014029.1 Protein Homology CDS 3746381 3747211 . - 0 ID=cds3410;Parent=gene3472;Dbxref=Genbank:WP_002209438.1;Name=WP_002209438.1;gbkey=CDS;product=transketolase;protein_id=WP_002209438.1;transl_table=11 NC_014029.1 RefSeq gene 3747467 3748609 . - . ID=gene3473;Name=YPZ3_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17395;old_locus_tag=YPZ3_2918 NC_014029.1 Protein Homology CDS 3747467 3748609 . - 0 ID=cds3411;Parent=gene3473;Dbxref=Genbank:WP_002354764.1;Name=WP_002354764.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002354764.1;transl_table=11 NC_014029.1 RefSeq gene 3748609 3750132 . - . ID=gene3474;Name=YPZ3_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17400;old_locus_tag=YPZ3_2919 NC_014029.1 Protein Homology CDS 3748609 3750132 . - 0 ID=cds3412;Parent=gene3474;Dbxref=Genbank:WP_002209436.1;Name=WP_002209436.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209436.1;transl_table=11 NC_014029.1 RefSeq gene 3750132 3750749 . - . ID=gene3475;Name=YPZ3_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17405;old_locus_tag=YPZ3_2920 NC_014029.1 Protein Homology CDS 3750132 3750749 . - 0 ID=cds3413;Parent=gene3475;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11 NC_014029.1 RefSeq gene 3750842 3751783 . - . ID=gene3476;Name=YPZ3_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17410;old_locus_tag=YPZ3_2921 NC_014029.1 Protein Homology CDS 3750842 3751783 . - 0 ID=cds3414;Parent=gene3476;Dbxref=Genbank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11 NC_014029.1 RefSeq gene 3752319 3754532 . + . ID=gene3477;Name=YPZ3_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17415;old_locus_tag=YPZ3_2922 NC_014029.1 Protein Homology CDS 3752319 3754532 . + 0 ID=cds3415;Parent=gene3477;Dbxref=Genbank:WP_002209433.1;Name=WP_002209433.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_002209433.1;transl_table=11 NC_014029.1 RefSeq gene 3754609 3754992 . + . ID=gene3478;Name=YPZ3_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17420 NC_014029.1 Protein Homology CDS 3754609 3754992 . + 0 ID=cds3416;Parent=gene3478;Dbxref=Genbank:WP_002215101.1;Name=WP_002215101.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_002215101.1;transl_table=11 NC_014029.1 RefSeq gene 3755140 3755670 . + . ID=gene3479;Name=YPZ3_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17425 NC_014029.1 Protein Homology CDS 3755140 3755670 . + 0 ID=cds3417;Parent=gene3479;Dbxref=Genbank:WP_002215100.1;Name=WP_002215100.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome b561;protein_id=WP_002215100.1;transl_table=11 NC_014029.1 RefSeq gene 3755927 3756637 . - . ID=gene3480;Name=YPZ3_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17430;old_locus_tag=YPZ3_2924 NC_014029.1 Protein Homology CDS 3755927 3756637 . - 0 ID=cds3418;Parent=gene3480;Dbxref=Genbank:WP_002209430.1;Name=WP_002209430.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_002209430.1;transl_table=11 NC_014029.1 RefSeq gene 3756783 3757643 . - . ID=gene3481;Name=YPZ3_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17435;old_locus_tag=YPZ3_2925 NC_014029.1 Protein Homology CDS 3756783 3757643 . - 0 ID=cds3419;Parent=gene3481;Dbxref=Genbank:WP_002209429.1;Name=WP_002209429.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_002209429.1;transl_table=11 NC_014029.1 RefSeq gene 3757645 3758262 . - . ID=gene3482;Name=YPZ3_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17440;old_locus_tag=YPZ3_2926 NC_014029.1 Protein Homology CDS 3757645 3758262 . - 0 ID=cds3420;Parent=gene3482;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11 NC_014029.1 RefSeq gene 3758274 3760724 . - . ID=gene3483;Name=YPZ3_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17445;old_locus_tag=YPZ3_2927 NC_014029.1 Protein Homology CDS 3758274 3760724 . - 0 ID=cds3421;Parent=gene3483;Dbxref=Genbank:WP_002209427.1;Name=WP_002209427.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002209427.1;transl_table=11 NC_014029.1 RefSeq gene 3761187 3761882 . - . ID=gene3484;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPZ3_RS17450;old_locus_tag=YPZ3_2928 NC_014029.1 Protein Homology CDS 3761187 3761882 . - 0 ID=cds3422;Parent=gene3484;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NC_014029.1 RefSeq gene 3762585 3763394 . + . ID=gene3485;Name=YPZ3_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17455;old_locus_tag=YPZ3_2929 NC_014029.1 Protein Homology CDS 3762585 3763394 . + 0 ID=cds3423;Parent=gene3485;Dbxref=Genbank:WP_002209424.1;Name=WP_002209424.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209424.1;transl_table=11 NC_014029.1 RefSeq gene 3763555 3764559 . + . ID=gene3486;Name=YPZ3_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17460;old_locus_tag=YPZ3_2930 NC_014029.1 Protein Homology CDS 3763555 3764559 . + 0 ID=cds3424;Parent=gene3486;Dbxref=Genbank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002216011.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3764661 3765379 . + . ID=id281;gbkey=repeat_region NC_014029.1 RefSeq gene 3764810 3765268 . + . ID=gene3487;Name=YPZ3_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17465;old_locus_tag=YPZ3_2931 NC_014029.1 Protein Homology CDS 3764810 3765268 . + 0 ID=cds3425;Parent=gene3487;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3765419 3766933 . + . ID=gene3488;Name=YPZ3_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17470;old_locus_tag=YPZ3_2932 NC_014029.1 Protein Homology CDS 3765419 3766933 . + 0 ID=cds3426;Parent=gene3488;Dbxref=Genbank:WP_002209422.1;Name=WP_002209422.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209422.1;transl_table=11 NC_014029.1 RefSeq gene 3766926 3767915 . + . ID=gene3489;Name=YPZ3_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17475;old_locus_tag=YPZ3_2933 NC_014029.1 Protein Homology CDS 3766926 3767915 . + 0 ID=cds3427;Parent=gene3489;Dbxref=Genbank:WP_002209421.1;Name=WP_002209421.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209421.1;transl_table=11 NC_014029.1 RefSeq gene 3767928 3768965 . + . ID=gene3490;Name=YPZ3_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17480;old_locus_tag=YPZ3_2934 NC_014029.1 Protein Homology CDS 3767928 3768965 . + 0 ID=cds3428;Parent=gene3490;Dbxref=Genbank:WP_002216010.1;Name=WP_002216010.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002216010.1;transl_table=11 NC_014029.1 RefSeq gene 3769171 3770052 . + . ID=gene3491;Name=YPZ3_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17485;old_locus_tag=YPZ3_2935 NC_014029.1 Protein Homology CDS 3769171 3770052 . + 0 ID=cds3429;Parent=gene3491;Dbxref=Genbank:WP_002209420.1;Name=WP_002209420.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_002209420.1;transl_table=11 NC_014029.1 RefSeq gene 3770063 3771559 . + . ID=gene3492;Name=YPZ3_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17490;old_locus_tag=YPZ3_2936 NC_014029.1 Protein Homology CDS 3770063 3771559 . + 0 ID=cds3430;Parent=gene3492;Dbxref=Genbank:WP_002209419.1;Name=WP_002209419.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_002209419.1;transl_table=11 NC_014029.1 RefSeq gene 3771957 3773600 . + . ID=gene3493;Name=YPZ3_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17495;old_locus_tag=YPZ3_2937 NC_014029.1 Protein Homology CDS 3771957 3773600 . + 0 ID=cds3431;Parent=gene3493;Dbxref=Genbank:WP_002209418.1;Name=WP_002209418.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_002209418.1;transl_table=11 NC_014029.1 RefSeq gene 3773783 3774034 . + . ID=gene3494;Name=YPZ3_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17500 NC_014029.1 Protein Homology CDS 3773783 3774034 . + 0 ID=cds3432;Parent=gene3494;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11 NC_014029.1 RefSeq gene 3774031 3774816 . + . ID=gene3495;Name=YPZ3_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17505;old_locus_tag=YPZ3_2938 NC_014029.1 Protein Homology CDS 3774031 3774816 . + 0 ID=cds3433;Parent=gene3495;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11 NC_014029.1 RefSeq gene 3774826 3775011 . - . ID=gene3496;Name=YPZ3_RS17510;gbkey=Gene;gene_biotype=other;locus_tag=YPZ3_RS17510 NC_014029.1 RefSeq gene 3775174 3776361 . - . ID=gene3497;Name=YPZ3_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17515;old_locus_tag=YPZ3_2939 NC_014029.1 Protein Homology CDS 3775174 3776361 . - 0 ID=cds3434;Parent=gene3497;Dbxref=Genbank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002209414.1;transl_table=11 NC_014029.1 RefSeq gene 3776794 3777261 . - . ID=gene3498;Name=YPZ3_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17520;old_locus_tag=YPZ3_2940 NC_014029.1 Protein Homology CDS 3776794 3777261 . - 0 ID=cds3435;Parent=gene3498;Dbxref=Genbank:WP_002229608.1;Name=WP_002229608.1;gbkey=CDS;product=adhesin;protein_id=WP_002229608.1;transl_table=11 NC_014029.1 RefSeq gene 3777307 3778890 . - . ID=gene3499;Name=YPZ3_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17525;old_locus_tag=YPZ3_2941 NC_014029.1 Protein Homology CDS 3777307 3778890 . - 0 ID=cds3436;Parent=gene3499;Dbxref=Genbank:WP_002354783.1;Name=WP_002354783.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002354783.1;transl_table=11 NC_014029.1 RefSeq gene 3779063 3779314 . + . ID=gene3500;Name=YPZ3_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17530 NC_014029.1 Protein Homology CDS 3779063 3779314 . + 0 ID=cds3437;Parent=gene3500;Dbxref=Genbank:WP_002223220.1;Name=WP_002223220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223220.1;transl_table=11 NC_014029.1 RefSeq gene 3779551 3780930 . + . ID=gene3501;Name=YPZ3_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17535;old_locus_tag=YPZ3_2942 NC_014029.1 Protein Homology CDS 3779551 3780930 . + 0 ID=cds3438;Parent=gene3501;Dbxref=Genbank:WP_002209412.1;Name=WP_002209412.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209412.1;transl_table=11 NC_014029.1 RefSeq gene 3781001 3781765 . + . ID=gene3502;Name=YPZ3_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17540;old_locus_tag=YPZ3_2943 NC_014029.1 Protein Homology CDS 3781001 3781765 . + 0 ID=cds3439;Parent=gene3502;Dbxref=Genbank:WP_002209411.1;Name=WP_002209411.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002209411.1;transl_table=11 NC_014029.1 RefSeq gene 3782189 3782392 . + . ID=gene3503;Name=YPZ3_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17545 NC_014029.1 Protein Homology CDS 3782189 3782392 . + 0 ID=cds3440;Parent=gene3503;Dbxref=Genbank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NC_014029.1 RefSeq gene 3782603 3782866 . + . ID=gene3504;Name=YPZ3_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17550 NC_014029.1 Protein Homology CDS 3782603 3782866 . + 0 ID=cds3441;Parent=gene3504;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11 NC_014029.1 RefSeq gene 3783113 3783454 . + . ID=gene3505;Name=YPZ3_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17555;old_locus_tag=YPZ3_2944 NC_014029.1 Protein Homology CDS 3783113 3783454 . + 0 ID=cds3442;Parent=gene3505;Dbxref=Genbank:WP_002209409.1;Name=WP_002209409.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_002209409.1;transl_table=11 NC_014029.1 RefSeq gene 3783539 3784828 . + . ID=gene3506;Name=YPZ3_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17560;old_locus_tag=YPZ3_2945 NC_014029.1 Protein Homology CDS 3783539 3784828 . + 0 ID=cds3443;Parent=gene3506;Dbxref=Genbank:WP_002209408.1;Name=WP_002209408.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_002209408.1;transl_table=11 NC_014029.1 RefSeq gene 3785383 3786355 . + . ID=gene3507;Name=YPZ3_RS17565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS17565;pseudo=true NC_014029.1 Protein Homology CDS 3785383 3786355 . + 0 ID=cds3444;Parent=gene3507;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3786476 3787150 . - . ID=gene3508;Name=YPZ3_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17570;old_locus_tag=YPZ3_2948 NC_014029.1 Protein Homology CDS 3786476 3787150 . - 0 ID=cds3445;Parent=gene3508;Dbxref=Genbank:WP_002209406.1;Name=WP_002209406.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002209406.1;transl_table=11 NC_014029.1 RefSeq gene 3787157 3788158 . - . ID=gene3509;Name=YPZ3_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17575;old_locus_tag=YPZ3_2949 NC_014029.1 Protein Homology CDS 3787157 3788158 . - 0 ID=cds3446;Parent=gene3509;Dbxref=Genbank:WP_002228229.1;Name=WP_002228229.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002228229.1;transl_table=11 NC_014029.1 RefSeq gene 3788245 3789015 . - . ID=gene3510;Name=YPZ3_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17580;old_locus_tag=YPZ3_2950 NC_014029.1 Protein Homology CDS 3788245 3789015 . - 0 ID=cds3447;Parent=gene3510;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11 NC_014029.1 RefSeq gene 3789079 3790194 . - . ID=gene3511;Name=YPZ3_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17585;old_locus_tag=YPZ3_2951 NC_014029.1 Protein Homology CDS 3789079 3790194 . - 0 ID=cds3448;Parent=gene3511;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NC_014029.1 RefSeq gene 3790677 3791132 . + . ID=gene3512;Name=YPZ3_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17590;old_locus_tag=YPZ3_2952 NC_014029.1 Protein Homology CDS 3790677 3791132 . + 0 ID=cds3449;Parent=gene3512;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11 NC_014029.1 RefSeq gene 3791295 3791429 . - . ID=gene3513;Name=YPZ3_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17595 NC_014029.1 Protein Homology CDS 3791295 3791429 . - 0 ID=cds3450;Parent=gene3513;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11 NC_014029.1 RefSeq gene 3791926 3794481 . + . ID=gene3514;Name=YPZ3_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17600;old_locus_tag=YPZ3_2953 NC_014029.1 Protein Homology CDS 3791926 3794481 . + 0 ID=cds3451;Parent=gene3514;Dbxref=Genbank:WP_002209399.1;Name=WP_002209399.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_002209399.1;transl_table=11 NC_014029.1 RefSeq gene 3794841 3795839 . - . ID=gene3515;Name=YPZ3_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17605;old_locus_tag=YPZ3_2954 NC_014029.1 Protein Homology CDS 3794841 3795839 . - 0 ID=cds3452;Parent=gene3515;Dbxref=Genbank:WP_002209397.1;Name=WP_002209397.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_002209397.1;transl_table=11 NC_014029.1 RefSeq gene 3795894 3796877 . - . ID=gene3516;Name=YPZ3_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17610;old_locus_tag=YPZ3_2955 NC_014029.1 Protein Homology CDS 3795894 3796877 . - 0 ID=cds3453;Parent=gene3516;Dbxref=Genbank:WP_002209396.1;Name=WP_002209396.1;gbkey=CDS;product=lipoprotein nlpD;protein_id=WP_002209396.1;transl_table=11 NC_014029.1 RefSeq gene 3796999 3797625 . - . ID=gene3517;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YPZ3_RS17615;old_locus_tag=YPZ3_2956 NC_014029.1 Protein Homology CDS 3796999 3797625 . - 0 ID=cds3454;Parent=gene3517;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NC_014029.1 RefSeq gene 3797619 3798383 . - . ID=gene3518;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YPZ3_RS17620;old_locus_tag=YPZ3_2957 NC_014029.1 Protein Homology CDS 3797619 3798383 . - 0 ID=cds3455;Parent=gene3518;Dbxref=Genbank:WP_002209394.1;Name=WP_002209394.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_002209394.1;transl_table=11 NC_014029.1 RefSeq gene 3798361 3799410 . - . ID=gene3519;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=YPZ3_RS17625;old_locus_tag=YPZ3_2958 NC_014029.1 Protein Homology CDS 3798361 3799410 . - 0 ID=cds3456;Parent=gene3519;Dbxref=Genbank:WP_002209393.1;Name=WP_002209393.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_002209393.1;transl_table=11 NC_014029.1 RefSeq gene 3799421 3799909 . - . ID=gene3520;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YPZ3_RS17630;old_locus_tag=YPZ3_2959 NC_014029.1 Protein Homology CDS 3799421 3799909 . - 0 ID=cds3457;Parent=gene3520;Dbxref=Genbank:WP_002209392.1;Name=WP_002209392.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NC_014029.1 RefSeq gene 3800048 3800773 . - . ID=gene3521;Name=YPZ3_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17635;old_locus_tag=YPZ3_2960 NC_014029.1 Protein Homology CDS 3800048 3800773 . - 0 ID=cds3458;Parent=gene3521;Dbxref=Genbank:WP_002209391.1;Name=WP_002209391.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_002209391.1;transl_table=11 NC_014029.1 RefSeq gene 3800777 3801097 . - . ID=gene3522;Name=YPZ3_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17640;old_locus_tag=YPZ3_2961 NC_014029.1 Protein Homology CDS 3800777 3801097 . - 0 ID=cds3459;Parent=gene3522;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NC_014029.1 RefSeq gene 3801411 3801728 . - . ID=gene3523;Name=YPZ3_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17645;old_locus_tag=YPZ3_2962 NC_014029.1 Protein Homology CDS 3801411 3801728 . - 0 ID=cds3460;Parent=gene3523;Dbxref=Genbank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209389.1;transl_table=11 NC_014029.1 RefSeq gene 3801919 3802560 . - . ID=gene3524;Name=YPZ3_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17650;old_locus_tag=YPZ3_2963 NC_014029.1 Protein Homology CDS 3801919 3802560 . - 0 ID=cds3461;Parent=gene3524;Dbxref=Genbank:WP_002209388.1;Name=WP_002209388.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NC_014029.1 RefSeq gene 3802562 3803998 . - . ID=gene3525;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YPZ3_RS17655;old_locus_tag=YPZ3_2964 NC_014029.1 Protein Homology CDS 3802562 3803998 . - 0 ID=cds3462;Parent=gene3525;Dbxref=Genbank:WP_002228227.1;Name=WP_002228227.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_002228227.1;transl_table=11 NC_014029.1 RefSeq gene 3804091 3804999 . - . ID=gene3526;Name=YPZ3_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17660;old_locus_tag=YPZ3_2965 NC_014029.1 Protein Homology CDS 3804091 3804999 . - 0 ID=cds3463;Parent=gene3526;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11 NC_014029.1 RefSeq gene 3805010 3806428 . - . ID=gene3527;Name=YPZ3_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17665;old_locus_tag=YPZ3_2966 NC_014029.1 Protein Homology CDS 3805010 3806428 . - 0 ID=cds3464;Parent=gene3527;Dbxref=Genbank:WP_002209385.1;Name=WP_002209385.1;gbkey=CDS;product=sirohydrochlorin ferrochelatase;protein_id=WP_002209385.1;transl_table=11 NC_014029.1 RefSeq gene 3806729 3806926 . - . ID=gene3528;Name=YPZ3_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17670 NC_014029.1 Protein Homology CDS 3806729 3806926 . - 0 ID=cds3465;Parent=gene3528;Dbxref=Genbank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;product=membrane protein;protein_id=WP_002222261.1;transl_table=11 NC_014029.1 RefSeq gene 3807019 3807219 . + . ID=gene3529;Name=YPZ3_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17675 NC_014029.1 Protein Homology CDS 3807019 3807219 . + 0 ID=cds3466;Parent=gene3529;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11 NC_014029.1 RefSeq gene 3807394 3807801 . + . ID=gene3530;Name=YPZ3_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17680;old_locus_tag=YPZ3_2967 NC_014029.1 Protein Homology CDS 3807394 3807801 . + 0 ID=cds3467;Parent=gene3530;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3807829 3808008 . + . ID=id282;gbkey=repeat_region NC_014029.1 RefSeq gene 3808044 3808770 . - . ID=gene3531;Name=YPZ3_RS17685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS17685;pseudo=true NC_014029.1 Protein Homology CDS 3808044 3808770 . - 0 ID=cds3468;Parent=gene3531;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3808767 3810497 . - . ID=gene3532;Name=YPZ3_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17690;old_locus_tag=YPZ3_2969 NC_014029.1 Protein Homology CDS 3808767 3810497 . - 0 ID=cds3469;Parent=gene3532;Dbxref=Genbank:WP_002209382.1;Name=WP_002209382.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_002209382.1;transl_table=11 NC_014029.1 RefSeq gene 3810497 3812317 . - . ID=gene3533;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS17695;old_locus_tag=YPZ3_2970 NC_014029.1 Protein Homology CDS 3810497 3812317 . - 0 ID=cds3470;Parent=gene3533;Dbxref=Genbank:WP_002209381.1;Name=WP_002209381.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_002209381.1;transl_table=11 NC_014029.1 RefSeq gene 3812710 3813069 . + . ID=gene3534;Name=YPZ3_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17700;old_locus_tag=YPZ3_2971 NC_014029.1 Protein Homology CDS 3812710 3813069 . + 0 ID=cds3471;Parent=gene3534;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11 NC_014029.1 RefSeq gene 3813303 3813974 . - . ID=gene3535;Name=YPZ3_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17705;old_locus_tag=YPZ3_2972 NC_014029.1 Protein Homology CDS 3813303 3813974 . - 0 ID=cds3472;Parent=gene3535;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11 NC_014029.1 RefSeq gene 3814078 3814683 . - . ID=gene3536;Name=YPZ3_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17710;old_locus_tag=YPZ3_2973 NC_014029.1 Protein Homology CDS 3814078 3814683 . - 0 ID=cds3473;Parent=gene3536;Dbxref=Genbank:WP_002218050.1;Name=WP_002218050.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002218050.1;transl_table=11 NC_014029.1 RefSeq gene 3815046 3816341 . - . ID=gene3537;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YPZ3_RS17715;old_locus_tag=YPZ3_2974 NC_014029.1 Protein Homology CDS 3815046 3816341 . - 0 ID=cds3474;Parent=gene3537;Dbxref=Genbank:WP_002209377.1;Name=WP_002209377.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_002209377.1;transl_table=11 NC_014029.1 RefSeq gene 3816422 3818059 . - . ID=gene3538;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YPZ3_RS17720;old_locus_tag=YPZ3_2975 NC_014029.1 Protein Homology CDS 3816422 3818059 . - 0 ID=cds3475;Parent=gene3538;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11 NC_014029.1 RefSeq gene 3818271 3819113 . - . ID=gene3539;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YPZ3_RS17725;old_locus_tag=YPZ3_2976 NC_014029.1 Protein Homology CDS 3818271 3819113 . - 0 ID=cds3476;Parent=gene3539;Dbxref=Genbank:WP_002209374.1;Name=WP_002209374.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002209374.1;transl_table=11 NC_014029.1 RefSeq gene 3819120 3819278 . - . ID=gene3540;Name=YPZ3_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17730 NC_014029.1 Protein Homology CDS 3819120 3819278 . - 0 ID=cds3477;Parent=gene3540;Dbxref=Genbank:WP_002228225.1;Name=WP_002228225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228225.1;transl_table=11 NC_014029.1 RefSeq gene 3819315 3821549 . - . ID=gene3541;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YPZ3_RS17735;old_locus_tag=YPZ3_2977 NC_014029.1 Protein Homology CDS 3819315 3821549 . - 0 ID=cds3478;Parent=gene3541;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11 NC_014029.1 RefSeq gene 3821993 3824785 . + . ID=gene3542;Name=YPZ3_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17740;old_locus_tag=YPZ3_2978 NC_014029.1 Protein Homology CDS 3821993 3824785 . + 0 ID=cds3479;Parent=gene3542;Dbxref=Genbank:WP_002209371.1;Name=WP_002209371.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002209371.1;transl_table=11 NC_014029.1 RefSeq gene 3824960 3826405 . - . ID=gene3543;Name=YPZ3_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17745;old_locus_tag=YPZ3_2979 NC_014029.1 Protein Homology CDS 3824960 3826405 . - 0 ID=cds3480;Parent=gene3543;Dbxref=Genbank:WP_002209370.1;Name=WP_002209370.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_002209370.1;transl_table=11 NC_014029.1 RefSeq gene 3826603 3828123 . - . ID=gene3544;Name=YPZ3_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17750;old_locus_tag=YPZ3_2980 NC_014029.1 Protein Homology CDS 3826603 3828123 . - 0 ID=cds3481;Parent=gene3544;Dbxref=Genbank:WP_002209369.1;Name=WP_002209369.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_002209369.1;transl_table=11 NC_014029.1 RefSeq gene 3828417 3829118 . + . ID=gene3545;Name=YPZ3_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17755;old_locus_tag=YPZ3_2981 NC_014029.1 Protein Homology CDS 3828417 3829118 . + 0 ID=cds3482;Parent=gene3545;Dbxref=Genbank:WP_002209368.1;Name=WP_002209368.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_002209368.1;transl_table=11 NC_014029.1 RefSeq gene 3829118 3829960 . + . ID=gene3546;Name=YPZ3_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17760;old_locus_tag=YPZ3_2982 NC_014029.1 Protein Homology CDS 3829118 3829960 . + 0 ID=cds3483;Parent=gene3546;Dbxref=Genbank:WP_002222100.1;Name=WP_002222100.1;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_002222100.1;transl_table=11 NC_014029.1 RefSeq gene 3829960 3830574 . + . ID=gene3547;Name=YPZ3_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17765;old_locus_tag=YPZ3_2983 NC_014029.1 Protein Homology CDS 3829960 3830574 . + 0 ID=cds3484;Parent=gene3547;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11 NC_014029.1 RefSeq gene 3830859 3831203 . - . ID=gene3548;Name=YPZ3_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17770;old_locus_tag=YPZ3_2984 NC_014029.1 Protein Homology CDS 3830859 3831203 . - 0 ID=cds3485;Parent=gene3548;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NC_014029.1 RefSeq gene 3831339 3832775 . - . ID=gene3549;Name=YPZ3_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17775;old_locus_tag=YPZ3_2985 NC_014029.1 Protein Homology CDS 3831339 3832775 . - 0 ID=cds3486;Parent=gene3549;Dbxref=Genbank:WP_002209364.1;Name=WP_002209364.1;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_002209364.1;transl_table=11 NC_014029.1 RefSeq gene 3833156 3834436 . + . ID=gene3550;Name=YPZ3_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17780;old_locus_tag=YPZ3_2986 NC_014029.1 Protein Homology CDS 3833156 3834436 . + 0 ID=cds3487;Parent=gene3550;Dbxref=Genbank:WP_002209362.1;Name=WP_002209362.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002209362.1;transl_table=11 NC_014029.1 RefSeq gene 3834810 3836807 . - . ID=gene3551;Name=YPZ3_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17785;old_locus_tag=YPZ3_2987 NC_014029.1 Protein Homology CDS 3834810 3836807 . - 0 ID=cds3488;Parent=gene3551;Dbxref=Genbank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=WP_002209361.1;transl_table=11 NC_014029.1 RefSeq gene 3836804 3837715 . - . ID=gene3552;Name=YPZ3_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17790;old_locus_tag=YPZ3_2988 NC_014029.1 Protein Homology CDS 3836804 3837715 . - 0 ID=cds3489;Parent=gene3552;Dbxref=Genbank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_002209360.1;transl_table=11 NC_014029.1 RefSeq gene 3837709 3837936 . + . ID=gene3553;Name=YPZ3_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17795 NC_014029.1 Protein Homology CDS 3837709 3837936 . + 0 ID=cds3490;Parent=gene3553;Dbxref=Genbank:WP_002426047.1;Name=WP_002426047.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002426047.1;transl_table=11 NC_014029.1 RefSeq gene 3837892 3838686 . - . ID=gene3554;Name=YPZ3_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17800;old_locus_tag=YPZ3_2989 NC_014029.1 Protein Homology CDS 3837892 3838686 . - 0 ID=cds3491;Parent=gene3554;Dbxref=Genbank:WP_002209359.1;Name=WP_002209359.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_002209359.1;transl_table=11 NC_014029.1 RefSeq gene 3839008 3841482 . - . ID=gene3555;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=YPZ3_RS17805;old_locus_tag=YPZ3_2990 NC_014029.1 Protein Homology CDS 3839008 3841482 . - 0 ID=cds3492;Parent=gene3555;Dbxref=Genbank:WP_002209358.1;Name=WP_002209358.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_002209358.1;transl_table=11 NC_014029.1 RefSeq gene 3841591 3844152 . - . ID=gene3556;Name=YPZ3_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17810;old_locus_tag=YPZ3_2991 NC_014029.1 Protein Homology CDS 3841591 3844152 . - 0 ID=cds3493;Parent=gene3556;Dbxref=Genbank:WP_002222096.1;Name=WP_002222096.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=RNA helicase;protein_id=WP_002222096.1;transl_table=11 NC_014029.1 RefSeq gene 3844193 3844768 . + . ID=gene3557;Name=YPZ3_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17815;old_locus_tag=YPZ3_2992 NC_014029.1 Protein Homology CDS 3844193 3844768 . + 0 ID=cds3494;Parent=gene3557;Dbxref=Genbank:WP_002209356.1;Name=WP_002209356.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_002209356.1;transl_table=11 NC_014029.1 RefSeq gene 3844881 3845618 . + . ID=gene3558;Name=YPZ3_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17820;old_locus_tag=YPZ3_2993 NC_014029.1 Protein Homology CDS 3844881 3845618 . + 0 ID=cds3495;Parent=gene3558;Dbxref=Genbank:WP_002228221.1;Name=WP_002228221.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_002228221.1;transl_table=11 NC_014029.1 RefSeq gene 3845788 3846243 . + . ID=gene3559;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YPZ3_RS17825 NC_014029.1 Protein Homology CDS 3845788 3846243 . + 0 ID=cds3496;Parent=gene3559;Dbxref=Genbank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_002209354.1;transl_table=11 NC_014029.1 RefSeq gene 3846523 3847488 . + . ID=gene3560;Name=YPZ3_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17830;old_locus_tag=YPZ3_2995 NC_014029.1 Protein Homology CDS 3846523 3847488 . + 0 ID=cds3497;Parent=gene3560;Dbxref=Genbank:WP_002228220.1;Name=WP_002228220.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_002228220.1;transl_table=11 NC_014029.1 RefSeq gene 3847631 3849052 . + . ID=gene3561;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YPZ3_RS17835;old_locus_tag=YPZ3_2996 NC_014029.1 Protein Homology CDS 3847631 3849052 . + 0 ID=cds3498;Parent=gene3561;Dbxref=Genbank:WP_032465644.1;Name=WP_032465644.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_032465644.1;transl_table=11 NC_014029.1 RefSeq gene 3849060 3849539 . + . ID=gene3562;Name=YPZ3_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17840;old_locus_tag=YPZ3_2997 NC_014029.1 Protein Homology CDS 3849060 3849539 . + 0 ID=cds3499;Parent=gene3562;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11 NC_014029.1 RefSeq gene 3849808 3850605 . + . ID=gene3563;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YPZ3_RS17845;old_locus_tag=YPZ3_2998 NC_014029.1 Protein Homology CDS 3849808 3850605 . + 0 ID=cds3500;Parent=gene3563;Dbxref=Genbank:WP_002209349.1;Name=WP_002209349.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002209349.1;transl_table=11 NC_014029.1 RefSeq gene 3850693 3851547 . + . ID=gene3564;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YPZ3_RS17850;old_locus_tag=YPZ3_2999 NC_014029.1 Protein Homology CDS 3850693 3851547 . + 0 ID=cds3501;Parent=gene3564;Dbxref=Genbank:WP_002209348.1;Name=WP_002209348.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_002209348.1;transl_table=11 NC_014029.1 RefSeq gene 3851958 3852338 . + . ID=gene3565;Name=YPZ3_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17855;old_locus_tag=YPZ3_3000 NC_014029.1 Protein Homology CDS 3851958 3852338 . + 0 ID=cds3502;Parent=gene3565;Dbxref=Genbank:WP_002209347.1;Name=WP_002209347.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_002209347.1;transl_table=11 NC_014029.1 RefSeq gene 3852487 3853801 . - . ID=gene3566;Name=YPZ3_RS17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS17860;pseudo=true NC_014029.1 Protein Homology CDS 3852487 3853801 . - 0 ID=cds3503;Parent=gene3566;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3854008 3854778 . - . ID=gene3567;Name=YPZ3_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17865;old_locus_tag=YPZ3_3002 NC_014029.1 Protein Homology CDS 3854008 3854778 . - 0 ID=cds3504;Parent=gene3567;Dbxref=Genbank:WP_002209344.1;Name=WP_002209344.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209344.1;transl_table=11 NC_014029.1 RefSeq gene 3854775 3855701 . - . ID=gene3568;Name=YPZ3_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17870;old_locus_tag=YPZ3_3003 NC_014029.1 Protein Homology CDS 3854775 3855701 . - 0 ID=cds3505;Parent=gene3568;Dbxref=Genbank:WP_002209343.1;Name=WP_002209343.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209343.1;transl_table=11 NC_014029.1 RefSeq gene 3855937 3856599 . + . ID=gene3569;Name=YPZ3_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17875 NC_014029.1 Protein Homology CDS 3855937 3856599 . + 0 ID=cds3506;Parent=gene3569;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11 NC_014029.1 RefSeq gene 3856753 3857289 . - . ID=gene3570;Name=YPZ3_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17880;old_locus_tag=YPZ3_3005 NC_014029.1 Protein Homology CDS 3856753 3857289 . - 0 ID=cds3507;Parent=gene3570;Dbxref=Genbank:WP_002228216.1;Name=WP_002228216.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002228216.1;transl_table=11 NC_014029.1 RefSeq gene 3857509 3859110 . - . ID=gene3571;Name=YPZ3_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17885;old_locus_tag=YPZ3_3006 NC_014029.1 Protein Homology CDS 3857509 3859110 . - 0 ID=cds3508;Parent=gene3571;Dbxref=Genbank:WP_002209340.1;Name=WP_002209340.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=blue copper oxidase CueO;protein_id=WP_002209340.1;transl_table=11 NC_014029.1 RefSeq gene 3859427 3859774 . + . ID=gene3572;Name=YPZ3_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17890;old_locus_tag=YPZ3_3007 NC_014029.1 Protein Homology CDS 3859427 3859774 . + 0 ID=cds3509;Parent=gene3572;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11 NC_014029.1 RefSeq gene 3859891 3860781 . + . ID=gene3573;Name=YPZ3_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17895;old_locus_tag=YPZ3_3008 NC_014029.1 Protein Homology CDS 3859891 3860781 . + 0 ID=cds3510;Parent=gene3573;Dbxref=Genbank:WP_002209338.1;Name=WP_002209338.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_002209338.1;transl_table=11 NC_014029.1 RefSeq gene 3860859 3861653 . + . ID=gene3574;Name=YPZ3_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17900;old_locus_tag=YPZ3_3009 NC_014029.1 Protein Homology CDS 3860859 3861653 . + 0 ID=cds3511;Parent=gene3574;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11 NC_014029.1 RefSeq gene 3862091 3862999 . + . ID=gene3575;Name=YPZ3_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17905;old_locus_tag=YPZ3_3010 NC_014029.1 Protein Homology CDS 3862091 3862999 . + 0 ID=cds3512;Parent=gene3575;Dbxref=Genbank:WP_002209335.1;Name=WP_002209335.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_002209335.1;transl_table=11 NC_014029.1 RefSeq gene 3863110 3863469 . - . ID=gene3576;Name=YPZ3_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17910;old_locus_tag=YPZ3_3011 NC_014029.1 Protein Homology CDS 3863110 3863469 . - 0 ID=cds3513;Parent=gene3576;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11 NC_014029.1 RefSeq gene 3863768 3866365 . - . ID=gene3577;Name=YPZ3_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17915;old_locus_tag=YPZ3_3012 NC_014029.1 Protein Homology CDS 3863768 3866365 . - 0 ID=cds3514;Parent=gene3577;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3866823 3867547 . + . ID=id283;gbkey=repeat_region NC_014029.1 RefSeq gene 3866935 3867393 . - . ID=gene3578;Name=YPZ3_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17920;old_locus_tag=YPZ3_3013 NC_014029.1 Protein Homology CDS 3866935 3867393 . - 0 ID=cds3515;Parent=gene3578;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 3867383 3867538 . - . ID=gene3579;Name=YPZ3_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17925 NC_014029.1 Protein Homology CDS 3867383 3867538 . - 0 ID=cds3516;Parent=gene3579;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_014029.1 RefSeq gene 3867636 3869060 . - . ID=gene3580;Name=YPZ3_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17930;old_locus_tag=YPZ3_3014 NC_014029.1 Protein Homology CDS 3867636 3869060 . - 0 ID=cds3517;Parent=gene3580;Dbxref=Genbank:WP_002209332.1;Name=WP_002209332.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NC_014029.1 RefSeq gene 3869366 3870895 . - . ID=gene3581;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YPZ3_RS17935;old_locus_tag=YPZ3_3015 NC_014029.1 Protein Homology CDS 3869366 3870895 . - 0 ID=cds3518;Parent=gene3581;Dbxref=Genbank:WP_002209330.1;Name=WP_002209330.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_002209330.1;transl_table=11 NC_014029.1 RefSeq gene 3870909 3873572 . - . ID=gene3582;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YPZ3_RS17940;old_locus_tag=YPZ3_3016 NC_014029.1 Protein Homology CDS 3870909 3873572 . - 0 ID=cds3519;Parent=gene3582;Dbxref=Genbank:WP_002209329.1;Name=WP_002209329.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_002209329.1;transl_table=11 NC_014029.1 RefSeq gene 3873768 3874532 . - . ID=gene3583;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YPZ3_RS17945;old_locus_tag=YPZ3_3017 NC_014029.1 Protein Homology CDS 3873768 3874532 . - 0 ID=cds3520;Parent=gene3583;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11 NC_014029.1 RefSeq gene 3875396 3876793 . + . ID=gene3584;Name=YPZ3_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17950;old_locus_tag=YPZ3_3018 NC_014029.1 Protein Homology CDS 3875396 3876793 . + 0 ID=cds3521;Parent=gene3584;Dbxref=Genbank:WP_002209327.1;Name=WP_002209327.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002209327.1;transl_table=11 NC_014029.1 RefSeq gene 3877211 3878065 . - . ID=gene3585;Name=YPZ3_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17955;old_locus_tag=YPZ3_3019 NC_014029.1 Protein Homology CDS 3877211 3878065 . - 0 ID=cds3522;Parent=gene3585;Dbxref=Genbank:WP_002209326.1;Name=WP_002209326.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209326.1;transl_table=11 NC_014029.1 RefSeq gene 3878355 3878906 . - . ID=gene3586;Name=YPZ3_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17960;old_locus_tag=YPZ3_3020 NC_014029.1 Protein Homology CDS 3878355 3878906 . - 0 ID=cds3523;Parent=gene3586;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11 NC_014029.1 RefSeq gene 3879019 3879927 . + . ID=gene3587;Name=YPZ3_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17965;old_locus_tag=YPZ3_3021 NC_014029.1 Protein Homology CDS 3879019 3879927 . + 0 ID=cds3524;Parent=gene3587;Dbxref=Genbank:WP_002209324.1;Name=WP_002209324.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_002209324.1;transl_table=11 NC_014029.1 RefSeq gene 3880130 3880594 . + . ID=gene3588;Name=YPZ3_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17970;old_locus_tag=YPZ3_3022 NC_014029.1 Protein Homology CDS 3880130 3880594 . + 0 ID=cds3525;Parent=gene3588;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11 NC_014029.1 RefSeq gene 3880587 3882125 . + . ID=gene3589;Name=YPZ3_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17975;old_locus_tag=YPZ3_3023 NC_014029.1 Protein Homology CDS 3880587 3882125 . + 0 ID=cds3526;Parent=gene3589;Dbxref=Genbank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;product=transporter HofB;protein_id=WP_002216083.1;transl_table=11 NC_014029.1 RefSeq gene 3882122 3883321 . + . ID=gene3590;Name=YPZ3_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17980;old_locus_tag=YPZ3_3024 NC_014029.1 Protein Homology CDS 3882122 3883321 . + 0 ID=cds3527;Parent=gene3590;Dbxref=Genbank:WP_002209321.1;Name=WP_002209321.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_002209321.1;transl_table=11 NC_014029.1 RefSeq gene 3883772 3884815 . - . ID=gene3591;Name=YPZ3_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17985;old_locus_tag=YPZ3_3025 NC_014029.1 Protein Homology CDS 3883772 3884815 . - 0 ID=cds3528;Parent=gene3591;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NC_014029.1 RefSeq gene 3884901 3885101 . + . ID=gene3592;Name=YPZ3_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS17990 NC_014029.1 Protein Homology CDS 3884901 3885101 . + 0 ID=cds3529;Parent=gene3592;Dbxref=Genbank:WP_002354912.1;Name=WP_002354912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354912.1;transl_table=11 NC_014029.1 RefSeq gene 3885111 3885731 . + . ID=gene3593;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YPZ3_RS17995;old_locus_tag=YPZ3_3026 NC_014029.1 Protein Homology CDS 3885111 3885731 . + 0 ID=cds3530;Parent=gene3593;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NC_014029.1 RefSeq gene 3885728 3886480 . + . ID=gene3594;Name=YPZ3_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18000;old_locus_tag=YPZ3_3027 NC_014029.1 Protein Homology CDS 3885728 3886480 . + 0 ID=cds3531;Parent=gene3594;Dbxref=Genbank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NC_014029.1 RefSeq gene 3886666 3886872 . + . ID=gene3595;Name=YPZ3_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18005 NC_014029.1 Protein Homology CDS 3886666 3886872 . + 0 ID=cds3532;Parent=gene3595;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3886952 3889499 . + . ID=id284;gbkey=repeat_region NC_014029.1 RefSeq gene 3887062 3887574 . - . ID=gene3596;Name=YPZ3_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18010;old_locus_tag=YPZ3_3028 NC_014029.1 Protein Homology CDS 3887062 3887574 . - 0 ID=cds3533;Parent=gene3596;Dbxref=Genbank:WP_002211869.1;Name=WP_002211869.1;gbkey=CDS;product=transposase;protein_id=WP_002211869.1;transl_table=11 NC_014029.1 RefSeq gene 3887631 3888653 . + . ID=gene3597;Name=YPZ3_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18015;old_locus_tag=YPZ3_3029 NC_014029.1 Protein Homology CDS 3887631 3888653 . + 0 ID=cds3534;Parent=gene3597;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 3888653 3889432 . + . ID=gene3598;Name=YPZ3_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18020;old_locus_tag=YPZ3_3030 NC_014029.1 Protein Homology CDS 3888653 3889432 . + 0 ID=cds3535;Parent=gene3598;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 3889483 3890592 . - . ID=gene3599;Name=YPZ3_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18025;old_locus_tag=YPZ3_3031 NC_014029.1 Protein Homology CDS 3889483 3890592 . - 0 ID=cds3536;Parent=gene3599;Dbxref=Genbank:WP_002209315.1;Name=WP_002209315.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209315.1;transl_table=11 NC_014029.1 RefSeq gene 3890585 3892495 . - . ID=gene3600;Name=YPZ3_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18030;old_locus_tag=YPZ3_3032 NC_014029.1 Protein Homology CDS 3890585 3892495 . - 0 ID=cds3537;Parent=gene3600;Dbxref=Genbank:WP_002209314.1;Name=WP_002209314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209314.1;transl_table=11 NC_014029.1 RefSeq gene 3892649 3893908 . - . ID=gene3601;Name=YPZ3_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18035;old_locus_tag=YPZ3_3033 NC_014029.1 Protein Homology CDS 3892649 3893908 . - 0 ID=cds3538;Parent=gene3601;Dbxref=Genbank:WP_002209313.1;Name=WP_002209313.1;gbkey=CDS;product=integrase;protein_id=WP_002209313.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3893901 3894112 . + . ID=id285;gbkey=repeat_region NC_014029.1 RefSeq gene 3894107 3894191 . - . ID=gene3602;Name=YPZ3_RS18040;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS18040;old_locus_tag=YPZ3_t49 NC_014029.1 tRNAscan-SE tRNA 3894107 3894191 . - . ID=rna57;Parent=gene3602;anticodon=(pos:complement(3894155..3894157));gbkey=tRNA;product=tRNA-Leu NC_014029.1 tRNAscan-SE exon 3894107 3894191 . - . ID=id286;Parent=rna57;anticodon=(pos:complement(3894155..3894157));gbkey=tRNA;product=tRNA-Leu NC_014029.1 RefSeq gene 3894296 3895372 . - . ID=gene3603;Name=YPZ3_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18045;old_locus_tag=YPZ3_3034 NC_014029.1 Protein Homology CDS 3894296 3895372 . - 0 ID=cds3539;Parent=gene3603;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NC_014029.1 RefSeq gene 3895372 3896466 . - . ID=gene3604;Name=YPZ3_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18050;old_locus_tag=YPZ3_3035 NC_014029.1 Protein Homology CDS 3895372 3896466 . - 0 ID=cds3540;Parent=gene3604;Dbxref=Genbank:WP_002209311.1;Name=WP_002209311.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NC_014029.1 RefSeq gene 3896746 3898257 . + . ID=gene3605;Name=YPZ3_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18055;old_locus_tag=YPZ3_3036 NC_014029.1 Protein Homology CDS 3896746 3898257 . + 0 ID=cds3541;Parent=gene3605;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NC_014029.1 RefSeq gene 3898408 3898857 . + . ID=gene3606;Name=YPZ3_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18060;old_locus_tag=YPZ3_3037 NC_014029.1 Protein Homology CDS 3898408 3898857 . + 0 ID=cds3542;Parent=gene3606;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NC_014029.1 RefSeq gene 3898870 3901767 . + . ID=gene3607;Name=YPZ3_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18065;old_locus_tag=YPZ3_3038 NC_014029.1 Protein Homology CDS 3898870 3901767 . + 0 ID=cds3543;Parent=gene3607;Dbxref=Genbank:WP_002209307.1;Name=WP_002209307.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_002209307.1;transl_table=11 NC_014029.1 RefSeq gene 3901910 3902413 . + . ID=gene3608;Name=YPZ3_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18070;old_locus_tag=YPZ3_3039 NC_014029.1 Protein Homology CDS 3901910 3902413 . + 0 ID=cds3544;Parent=gene3608;Dbxref=Genbank:WP_002223170.1;Name=WP_002223170.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002223170.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3902465 3902876 . + . ID=id287;gbkey=repeat_region NC_014029.1 RefSeq gene 3902920 3903351 . - . ID=gene3609;Name=YPZ3_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18075;old_locus_tag=YPZ3_3040 NC_014029.1 Protein Homology CDS 3902920 3903351 . - 0 ID=cds3545;Parent=gene3609;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11 NC_014029.1 RefSeq gene 3903563 3904570 . + . ID=gene3610;Name=YPZ3_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18080;old_locus_tag=YPZ3_3041 NC_014029.1 Protein Homology CDS 3903563 3904570 . + 0 ID=cds3546;Parent=gene3610;Dbxref=Genbank:WP_002209302.1;Name=WP_002209302.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_002209302.1;transl_table=11 NC_014029.1 RefSeq gene 3904877 3905335 . - . ID=gene3611;Name=YPZ3_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18085;old_locus_tag=YPZ3_3042 NC_014029.1 Protein Homology CDS 3904877 3905335 . - 0 ID=cds3547;Parent=gene3611;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3905609 3905778 . + . ID=id288;gbkey=repeat_region NC_014029.1 RefSeq gene 3905974 3907541 . + . ID=gene3612;Name=YPZ3_RS18090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS18090;pseudo=true NC_014029.1 Protein Homology CDS 3905974 3907541 . + 0 ID=cds3548;Parent=gene3612;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 3907637 3908686 . + . ID=gene3613;Name=YPZ3_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18095;old_locus_tag=YPZ3_3045 NC_014029.1 Protein Homology CDS 3907637 3908686 . + 0 ID=cds3549;Parent=gene3613;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NC_014029.1 RefSeq gene 3908705 3909541 . + . ID=gene3614;Name=YPZ3_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18100;old_locus_tag=YPZ3_3046 NC_014029.1 Protein Homology CDS 3908705 3909541 . + 0 ID=cds3550;Parent=gene3614;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NC_014029.1 RefSeq gene 3909534 3910412 . + . ID=gene3615;Name=YPZ3_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18105;old_locus_tag=YPZ3_3047 NC_014029.1 Protein Homology CDS 3909534 3910412 . + 0 ID=cds3551;Parent=gene3615;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NC_014029.1 RefSeq gene 3910399 3911115 . + . ID=gene3616;Name=YPZ3_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18110;old_locus_tag=YPZ3_3048 NC_014029.1 Protein Homology CDS 3910399 3911115 . + 0 ID=cds3552;Parent=gene3616;Dbxref=Genbank:WP_002209297.1;Name=WP_002209297.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209297.1;transl_table=11 NC_014029.1 RefSeq gene 3911549 3913687 . + . ID=gene3617;Name=YPZ3_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18115;old_locus_tag=YPZ3_3049 NC_014029.1 Protein Homology CDS 3911549 3913687 . + 0 ID=cds3553;Parent=gene3617;Dbxref=Genbank:WP_002209296.1;Name=WP_002209296.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NC_014029.1 RefSeq gene 3913864 3914328 . + . ID=gene3618;Name=YPZ3_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18120 NC_014029.1 Protein Homology CDS 3913864 3914328 . + 0 ID=cds3554;Parent=gene3618;Dbxref=Genbank:WP_025470743.1;Name=WP_025470743.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_025470743.1;transl_table=11 NC_014029.1 RefSeq gene 3914656 3915381 . + . ID=gene3619;Name=YPZ3_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18125;old_locus_tag=YPZ3_3051 NC_014029.1 Protein Homology CDS 3914656 3915381 . + 0 ID=cds3555;Parent=gene3619;Dbxref=Genbank:WP_002209293.1;Name=WP_002209293.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_002209293.1;transl_table=11 NC_014029.1 RefSeq gene 3915382 3915858 . + . ID=gene3620;Name=YPZ3_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18130;old_locus_tag=YPZ3_3052 NC_014029.1 Protein Homology CDS 3915382 3915858 . + 0 ID=cds3556;Parent=gene3620;Dbxref=Genbank:WP_002209292.1;Name=WP_002209292.1;gbkey=CDS;product=phosphonate metabolism protein PhnG;protein_id=WP_002209292.1;transl_table=11 NC_014029.1 RefSeq gene 3915858 3916484 . + . ID=gene3621;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=YPZ3_RS18135;old_locus_tag=YPZ3_3053 NC_014029.1 Protein Homology CDS 3915858 3916484 . + 0 ID=cds3557;Parent=gene3621;Dbxref=Genbank:WP_002209291.1;Name=WP_002209291.1;gbkey=CDS;gene=phnH;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_002209291.1;transl_table=11 NC_014029.1 RefSeq gene 3916484 3917662 . + . ID=gene3622;Name=YPZ3_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18140;old_locus_tag=YPZ3_3054 NC_014029.1 Protein Homology CDS 3916484 3917662 . + 0 ID=cds3558;Parent=gene3622;Dbxref=Genbank:WP_002209290.1;Name=WP_002209290.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_002209290.1;transl_table=11 NC_014029.1 RefSeq gene 3917655 3918536 . + . ID=gene3623;Name=YPZ3_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18145;old_locus_tag=YPZ3_3055 NC_014029.1 Protein Homology CDS 3917655 3918536 . + 0 ID=cds3559;Parent=gene3623;Dbxref=Genbank:WP_002209289.1;Name=WP_002209289.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_002209289.1;transl_table=11 NC_014029.1 RefSeq gene 3918536 3919327 . + . ID=gene3624;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YPZ3_RS18150;old_locus_tag=YPZ3_3056 NC_014029.1 Protein Homology CDS 3918536 3919327 . + 0 ID=cds3560;Parent=gene3624;Dbxref=Genbank:WP_002209288.1;Name=WP_002209288.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_002209288.1;transl_table=11 NC_014029.1 RefSeq gene 3919716 3920435 . + . ID=gene3625;Name=YPZ3_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18155;old_locus_tag=YPZ3_3057 NC_014029.1 Protein Homology CDS 3919716 3920435 . + 0 ID=cds3561;Parent=gene3625;Dbxref=Genbank:WP_002209287.1;Name=WP_002209287.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002209287.1;transl_table=11 NC_014029.1 RefSeq gene 3920432 3921568 . + . ID=gene3626;Name=YPZ3_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18160;old_locus_tag=YPZ3_3058 NC_014029.1 Protein Homology CDS 3920432 3921568 . + 0 ID=cds3562;Parent=gene3626;Dbxref=Genbank:WP_002209286.1;Name=WP_002209286.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_002209286.1;transl_table=11 NC_014029.1 RefSeq gene 3921568 3922149 . + . ID=gene3627;Name=YPZ3_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18165;old_locus_tag=YPZ3_3059 NC_014029.1 Protein Homology CDS 3921568 3922149 . + 0 ID=cds3563;Parent=gene3627;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11 NC_014029.1 RefSeq gene 3922140 3922892 . + . ID=gene3628;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YPZ3_RS18170;old_locus_tag=YPZ3_3060 NC_014029.1 Protein Homology CDS 3922140 3922892 . + 0 ID=cds3564;Parent=gene3628;Dbxref=Genbank:WP_002209284.1;Name=WP_002209284.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_002209284.1;transl_table=11 NC_014029.1 RefSeq gene 3922905 3923543 . - . ID=gene3629;Name=YPZ3_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18175;old_locus_tag=YPZ3_3061 NC_014029.1 Protein Homology CDS 3922905 3923543 . - 0 ID=cds3565;Parent=gene3629;Dbxref=Genbank:WP_002209283.1;Name=WP_002209283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209283.1;transl_table=11 NC_014029.1 RefSeq gene 3923695 3924138 . - . ID=gene3630;Name=YPZ3_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18180;old_locus_tag=YPZ3_3062 NC_014029.1 Protein Homology CDS 3923695 3924138 . - 0 ID=cds3566;Parent=gene3630;Dbxref=Genbank:WP_002209282.1;Name=WP_002209282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209282.1;transl_table=11 NC_014029.1 RefSeq gene 3924237 3925403 . - . ID=gene3631;Name=YPZ3_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18185;old_locus_tag=YPZ3_3063 NC_014029.1 Protein Homology CDS 3924237 3925403 . - 0 ID=cds3567;Parent=gene3631;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11 NC_014029.1 RefSeq gene 3925418 3926512 . - . ID=gene3632;Name=YPZ3_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18190;old_locus_tag=YPZ3_3064 NC_014029.1 Protein Homology CDS 3925418 3926512 . - 0 ID=cds3568;Parent=gene3632;Dbxref=Genbank:WP_002209280.1;Name=WP_002209280.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209280.1;transl_table=11 NC_014029.1 RefSeq gene 3926524 3927363 . - . ID=gene3633;Name=YPZ3_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18195;old_locus_tag=YPZ3_3065 NC_014029.1 Protein Homology CDS 3926524 3927363 . - 0 ID=cds3569;Parent=gene3633;Dbxref=Genbank:WP_002209279.1;Name=WP_002209279.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NC_014029.1 RefSeq gene 3927382 3928266 . - . ID=gene3634;Name=YPZ3_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18200;old_locus_tag=YPZ3_3066 NC_014029.1 Protein Homology CDS 3927382 3928266 . - 0 ID=cds3570;Parent=gene3634;Dbxref=Genbank:WP_002209278.1;Name=WP_002209278.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209278.1;transl_table=11 NC_014029.1 RefSeq gene 3928274 3929587 . - . ID=gene3635;Name=YPZ3_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18205;old_locus_tag=YPZ3_3067 NC_014029.1 Protein Homology CDS 3928274 3929587 . - 0 ID=cds3571;Parent=gene3635;Dbxref=Genbank:WP_002209277.1;Name=WP_002209277.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209277.1;transl_table=11 NC_014029.1 RefSeq gene 3930148 3931371 . + . ID=gene3636;Name=YPZ3_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18210;old_locus_tag=YPZ3_3068 NC_014029.1 Protein Homology CDS 3930148 3931371 . + 0 ID=cds3572;Parent=gene3636;Dbxref=Genbank:WP_002209276.1;Name=WP_002209276.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209276.1;transl_table=11 NC_014029.1 RefSeq gene 3931395 3933413 . + . ID=gene3637;Name=YPZ3_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18215;old_locus_tag=YPZ3_3069 NC_014029.1 Protein Homology CDS 3931395 3933413 . + 0 ID=cds3573;Parent=gene3637;Dbxref=Genbank:WP_002209275.1;Name=WP_002209275.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209275.1;transl_table=11 NC_014029.1 RefSeq gene 3933644 3933931 . + . ID=gene3638;Name=YPZ3_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18220 NC_014029.1 Protein Homology CDS 3933644 3933931 . + 0 ID=cds3574;Parent=gene3638;Dbxref=Genbank:WP_002209274.1;Name=WP_002209274.1;gbkey=CDS;product=nuclease;protein_id=WP_002209274.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3933898 3934029 . + . ID=id289;gbkey=repeat_region NC_014029.1 RefSeq gene 3934106 3934612 . - . ID=gene3639;Name=YPZ3_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18225;old_locus_tag=YPZ3_3070 NC_014029.1 Protein Homology CDS 3934106 3934612 . - 0 ID=cds3575;Parent=gene3639;Dbxref=Genbank:WP_002209273.1;Name=WP_002209273.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209273.1;transl_table=11 NC_014029.1 RefSeq gene 3934606 3935127 . - . ID=gene3640;Name=YPZ3_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18230;old_locus_tag=YPZ3_3071 NC_014029.1 Protein Homology CDS 3934606 3935127 . - 0 ID=cds3576;Parent=gene3640;Dbxref=Genbank:WP_002209272.1;Name=WP_002209272.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_002209272.1;transl_table=11 NC_014029.1 RefSeq gene 3935208 3935333 . + . ID=gene3641;Name=YPZ3_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18235 NC_014029.1 Protein Homology CDS 3935208 3935333 . + 0 ID=cds3577;Parent=gene3641;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11 NC_014029.1 RefSeq gene 3935443 3936438 . + . ID=gene3642;Name=YPZ3_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18240;old_locus_tag=YPZ3_3072 NC_014029.1 Protein Homology CDS 3935443 3936438 . + 0 ID=cds3578;Parent=gene3642;Dbxref=Genbank:WP_002209270.1;Name=WP_002209270.1;gbkey=CDS;product=protease;protein_id=WP_002209270.1;transl_table=11 NC_014029.1 RefSeq gene 3936450 3937328 . + . ID=gene3643;Name=YPZ3_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18245;old_locus_tag=YPZ3_3073 NC_014029.1 Protein Homology CDS 3936450 3937328 . + 0 ID=cds3579;Parent=gene3643;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11 NC_014029.1 RefSeq gene 3937469 3938875 . - . ID=gene3644;Name=YPZ3_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18250;old_locus_tag=YPZ3_3074 NC_014029.1 Protein Homology CDS 3937469 3938875 . - 0 ID=cds3580;Parent=gene3644;Dbxref=Genbank:WP_002209268.1;Name=WP_002209268.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002209268.1;transl_table=11 NC_014029.1 RefSeq gene 3938877 3942002 . - . ID=gene3645;Name=YPZ3_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18255;old_locus_tag=YPZ3_3075 NC_014029.1 Protein Homology CDS 3938877 3942002 . - 0 ID=cds3581;Parent=gene3645;Dbxref=Genbank:WP_002209267.1;Name=WP_002209267.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002209267.1;transl_table=11 NC_014029.1 RefSeq gene 3942006 3943166 . - . ID=gene3646;Name=YPZ3_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18260;old_locus_tag=YPZ3_3076 NC_014029.1 Protein Homology CDS 3942006 3943166 . - 0 ID=cds3582;Parent=gene3646;Dbxref=Genbank:WP_002209266.1;Name=WP_002209266.1;gbkey=CDS;product=acriflavine resistance protein E;protein_id=WP_002209266.1;transl_table=11 NC_014029.1 RefSeq gene 3943674 3944729 . + . ID=gene3647;Name=YPZ3_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18265;old_locus_tag=YPZ3_3077 NC_014029.1 Protein Homology CDS 3943674 3944729 . + 0 ID=cds3583;Parent=gene3647;Dbxref=Genbank:WP_002214817.1;Name=WP_002214817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214817.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3944779 3944953 . + . ID=id290;gbkey=repeat_region NC_014029.1 RefSeq gene 3944984 3945295 . - . ID=gene3648;Name=YPZ3_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18270;old_locus_tag=YPZ3_3078 NC_014029.1 Protein Homology CDS 3944984 3945295 . - 0 ID=cds3584;Parent=gene3648;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11 NC_014029.1 RefSeq gene 3945319 3945687 . - . ID=gene3649;Name=YPZ3_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18275 NC_014029.1 Protein Homology CDS 3945319 3945687 . - 0 ID=cds3585;Parent=gene3649;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11 NC_014029.1 RefSeq gene 3945730 3945903 . - . ID=gene3650;Name=YPZ3_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18280 NC_014029.1 Protein Homology CDS 3945730 3945903 . - 0 ID=cds3586;Parent=gene3650;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11 NC_014029.1 RefSeq gene 3945923 3947917 . - . ID=gene3651;Name=YPZ3_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18285;old_locus_tag=YPZ3_3079 NC_014029.1 Protein Homology CDS 3945923 3947917 . - 0 ID=cds3587;Parent=gene3651;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NC_014029.1 RefSeq gene 3948104 3948988 . - . ID=gene3652;Name=YPZ3_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18290;old_locus_tag=YPZ3_3080 NC_014029.1 Protein Homology CDS 3948104 3948988 . - 0 ID=cds3588;Parent=gene3652;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NC_014029.1 RefSeq gene 3949113 3951230 . - . ID=gene3653;Name=YPZ3_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18295;old_locus_tag=YPZ3_3081 NC_014029.1 Protein Homology CDS 3949113 3951230 . - 0 ID=cds3589;Parent=gene3653;Dbxref=Genbank:WP_002209259.1;Name=WP_002209259.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3951465 3952907 . + . ID=id291;gbkey=repeat_region NC_014029.1 RefSeq gene 3951497 3952282 . - . ID=gene3654;Name=YPZ3_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18300;old_locus_tag=YPZ3_3082 NC_014029.1 Protein Homology CDS 3951497 3952282 . - 0 ID=cds3590;Parent=gene3654;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_014029.1 RefSeq gene 3952336 3952851 . - . ID=gene3655;Name=YPZ3_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18305;old_locus_tag=YPZ3_3083 NC_014029.1 Protein Homology CDS 3952336 3952851 . - 0 ID=cds3591;Parent=gene3655;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_014029.1 RefSeq gene 3952902 3953645 . + . ID=gene3656;Name=YPZ3_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18310;old_locus_tag=YPZ3_3084 NC_014029.1 Protein Homology CDS 3952902 3953645 . + 0 ID=cds3592;Parent=gene3656;Dbxref=Genbank:WP_002228704.1;Name=WP_002228704.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002228704.1;transl_table=11 NC_014029.1 RefSeq gene 3953609 3954697 . + . ID=gene3657;Name=YPZ3_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18315;old_locus_tag=YPZ3_3085 NC_014029.1 Protein Homology CDS 3953609 3954697 . + 0 ID=cds3593;Parent=gene3657;Dbxref=Genbank:WP_002213885.1;Name=WP_002213885.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002213885.1;transl_table=11 NC_014029.1 RefSeq gene 3954823 3956139 . + . ID=gene3658;Name=YPZ3_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18320;old_locus_tag=YPZ3_3086 NC_014029.1 Protein Homology CDS 3954823 3956139 . + 0 ID=cds3594;Parent=gene3658;Dbxref=Genbank:WP_002212103.1;Name=WP_002212103.1;gbkey=CDS;product=phosphopeptide-binding protein;protein_id=WP_002212103.1;transl_table=11 NC_014029.1 RefSeq gene 3956139 3956684 . + . ID=gene3659;Name=YPZ3_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18325;old_locus_tag=YPZ3_3087 NC_014029.1 Protein Homology CDS 3956139 3956684 . + 0 ID=cds3595;Parent=gene3659;Dbxref=Genbank:WP_002212104.1;Name=WP_002212104.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212104.1;transl_table=11 NC_014029.1 RefSeq gene 3956687 3958033 . + . ID=gene3660;Name=YPZ3_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18330;old_locus_tag=YPZ3_3088 NC_014029.1 Protein Homology CDS 3956687 3958033 . + 0 ID=cds3596;Parent=gene3660;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11 NC_014029.1 RefSeq gene 3958048 3958800 . + . ID=gene3661;Name=YPZ3_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18335;old_locus_tag=YPZ3_3089 NC_014029.1 Protein Homology CDS 3958048 3958800 . + 0 ID=cds3597;Parent=gene3661;Dbxref=Genbank:WP_002355154.1;Name=WP_002355154.1;gbkey=CDS;product=chemotaxis protein MotB;protein_id=WP_002355154.1;transl_table=11 NC_014029.1 RefSeq gene 3958811 3961414 . + . ID=gene3662;Name=YPZ3_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18340;old_locus_tag=YPZ3_3090 NC_014029.1 Protein Homology CDS 3958811 3961414 . + 0 ID=cds3598;Parent=gene3662;Dbxref=Genbank:WP_002212107.1;Name=WP_002212107.1;gbkey=CDS;product=ATP-dependent Clp protease ClpV;protein_id=WP_002212107.1;transl_table=11 NC_014029.1 RefSeq gene 3961411 3962208 . + . ID=gene3663;Name=YPZ3_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18345;old_locus_tag=YPZ3_3091 NC_014029.1 Protein Homology CDS 3961411 3962208 . + 0 ID=cds3599;Parent=gene3663;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11 NC_014029.1 RefSeq gene 3962205 3962891 . + . ID=gene3664;Name=YPZ3_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18350;old_locus_tag=YPZ3_3092 NC_014029.1 Protein Homology CDS 3962205 3962891 . + 0 ID=cds3600;Parent=gene3664;Dbxref=Genbank:WP_002212109.1;Name=WP_002212109.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212109.1;transl_table=11 NC_014029.1 RefSeq gene 3962897 3964285 . + . ID=gene3665;Name=YPZ3_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18355;old_locus_tag=YPZ3_3093 NC_014029.1 Protein Homology CDS 3962897 3964285 . + 0 ID=cds3601;Parent=gene3665;Dbxref=Genbank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212110.1;transl_table=11 NC_014029.1 RefSeq gene 3964317 3967850 . + . ID=gene3666;Name=YPZ3_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18360;old_locus_tag=YPZ3_3094 NC_014029.1 Protein Homology CDS 3964317 3967850 . + 0 ID=cds3602;Parent=gene3666;Dbxref=Genbank:WP_002212111.1;Name=WP_002212111.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002212111.1;transl_table=11 NC_014029.1 RefSeq gene 3967975 3968757 . + . ID=gene3667;Name=YPZ3_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18365;old_locus_tag=YPZ3_3095 NC_014029.1 Protein Homology CDS 3967975 3968757 . + 0 ID=cds3603;Parent=gene3667;Dbxref=Genbank:WP_002213880.1;Name=WP_002213880.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213880.1;transl_table=11 NC_014029.1 RefSeq gene 3968754 3969287 . + . ID=gene3668;Name=YPZ3_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18370;old_locus_tag=YPZ3_3096 NC_014029.1 Protein Homology CDS 3968754 3969287 . + 0 ID=cds3604;Parent=gene3668;Dbxref=Genbank:WP_002213878.1;Name=WP_002213878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213878.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3969055 3969552 . + . ID=id292;gbkey=repeat_region NC_014029.1 RefSeq gene 3969309 3971711 . + . ID=gene3669;Name=YPZ3_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18375;old_locus_tag=YPZ3_3097 NC_014029.1 Protein Homology CDS 3969309 3971711 . + 0 ID=cds3605;Parent=gene3669;Dbxref=Genbank:WP_002213876.1;Name=WP_002213876.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002213876.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3969576 3971307 . + . ID=id293;gbkey=repeat_region NC_014029.1 RefSeq gene 3971717 3972175 . + . ID=gene3670;Name=YPZ3_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18380;old_locus_tag=YPZ3_3098 NC_014029.1 Protein Homology CDS 3971717 3972175 . + 0 ID=cds3606;Parent=gene3670;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11 NC_014029.1 RefSeq gene 3972168 3975032 . + . ID=gene3671;Name=YPZ3_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18385;old_locus_tag=YPZ3_3099 NC_014029.1 Protein Homology CDS 3972168 3975032 . + 0 ID=cds3607;Parent=gene3671;Dbxref=Genbank:WP_002213873.1;Name=WP_002213873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213873.1;transl_table=11 NC_014029.1 RefSeq gene 3975060 3976430 . + . ID=gene3672;Name=YPZ3_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18390;old_locus_tag=YPZ3_3100 NC_014029.1 Protein Homology CDS 3975060 3976430 . + 0 ID=cds3608;Parent=gene3672;Dbxref=Genbank:WP_002213871.1;Name=WP_002213871.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002213871.1;transl_table=11 NC_014029.1 RefSeq gene 3976432 3976917 . + . ID=gene3673;Name=YPZ3_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18395;old_locus_tag=YPZ3_3101 NC_014029.1 Protein Homology CDS 3976432 3976917 . + 0 ID=cds3609;Parent=gene3673;Dbxref=Genbank:WP_002213869.1;Name=WP_002213869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213869.1;transl_table=11 NC_014029.1 RefSeq gene 3976967 3977110 . - . ID=gene3674;Name=YPZ3_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18400 NC_014029.1 Protein Homology CDS 3976967 3977110 . - 0 ID=cds3610;Parent=gene3674;Dbxref=Genbank:WP_002210017.1;Name=WP_002210017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210017.1;transl_table=11 NC_014029.1 RefSeq gene 3977234 3977458 . - . ID=gene3675;Name=YPZ3_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18405 NC_014029.1 Protein Homology CDS 3977234 3977458 . - 0 ID=cds3611;Parent=gene3675;Dbxref=Genbank:WP_002213866.1;Name=WP_002213866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213866.1;transl_table=11 NC_014029.1 RefSeq gene 3977540 3977947 . - . ID=gene3676;Name=YPZ3_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18410;old_locus_tag=YPZ3_3102 NC_014029.1 Protein Homology CDS 3977540 3977947 . - 0 ID=cds3612;Parent=gene3676;Dbxref=Genbank:WP_002210018.1;Name=WP_002210018.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210018.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3978054 3980126 . + . ID=id294;gbkey=repeat_region NC_014029.1 RefSeq gene 3978308 3980506 . + . ID=gene3677;Name=YPZ3_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18420;old_locus_tag=YPZ3_3103 NC_014029.1 Protein Homology CDS 3978308 3980506 . + 0 ID=cds3613;Parent=gene3677;Dbxref=Genbank:WP_002210020.1;Name=WP_002210020.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002210020.1;transl_table=11 NC_014029.1 RefSeq gene 3980509 3980931 . + . ID=gene3678;Name=YPZ3_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18425;old_locus_tag=YPZ3_3104 NC_014029.1 Protein Homology CDS 3980509 3980931 . + 0 ID=cds3614;Parent=gene3678;Dbxref=Genbank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213861.1;transl_table=11 NC_014029.1 RefSeq gene 3980976 3985514 . + . ID=gene3679;Name=YPZ3_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18430;old_locus_tag=YPZ3_3105 NC_014029.1 Protein Homology CDS 3980976 3985514 . + 0 ID=cds3615;Parent=gene3679;Dbxref=Genbank:WP_002210022.1;Name=WP_002210022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210022.1;transl_table=11 NC_014029.1 RefSeq gene 3985523 3986317 . + . ID=gene3680;Name=YPZ3_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18435;old_locus_tag=YPZ3_3106 NC_014029.1 Protein Homology CDS 3985523 3986317 . + 0 ID=cds3616;Parent=gene3680;Dbxref=Genbank:WP_002210023.1;Name=WP_002210023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210023.1;transl_table=11 NC_014029.1 RefSeq gene 3986664 3987563 . - . ID=gene3681;Name=YPZ3_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18440;old_locus_tag=YPZ3_3107 NC_014029.1 Protein Homology CDS 3986664 3987563 . - 0 ID=cds3617;Parent=gene3681;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11 NC_014029.1 RefSeq gene 3987560 3988690 . - . ID=gene3682;Name=YPZ3_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18445;old_locus_tag=YPZ3_3108 NC_014029.1 Protein Homology CDS 3987560 3988690 . - 0 ID=cds3618;Parent=gene3682;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11 NC_014029.1 RefSeq gene 3988960 3989826 . + . ID=gene3683;Name=YPZ3_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18450;old_locus_tag=YPZ3_3109 NC_014029.1 Protein Homology CDS 3988960 3989826 . + 0 ID=cds3619;Parent=gene3683;Dbxref=Genbank:WP_002210026.1;Name=WP_002210026.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210026.1;transl_table=11 NC_014029.1 RefSeq gene 3989988 3990491 . - . ID=gene3684;Name=YPZ3_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18455;old_locus_tag=YPZ3_3110 NC_014029.1 Protein Homology CDS 3989988 3990491 . - 0 ID=cds3620;Parent=gene3684;Dbxref=Genbank:WP_002210027.1;Name=WP_002210027.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_002210027.1;transl_table=11 NC_014029.1 RefSeq gene 3990497 3991426 . - . ID=gene3685;Name=YPZ3_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18460;old_locus_tag=YPZ3_3111 NC_014029.1 Protein Homology CDS 3990497 3991426 . - 0 ID=cds3621;Parent=gene3685;Dbxref=Genbank:WP_002210028.1;Name=WP_002210028.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002210028.1;transl_table=11 NC_014029.1 RefSeq gene 3991583 3992284 . - . ID=gene3686;Name=YPZ3_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18465;old_locus_tag=YPZ3_3112 NC_014029.1 Protein Homology CDS 3991583 3992284 . - 0 ID=cds3622;Parent=gene3686;Dbxref=Genbank:WP_002210030.1;Name=WP_002210030.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002210030.1;transl_table=11 NC_014029.1 RefSeq gene 3992755 3993336 . + . ID=gene3687;Name=YPZ3_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18470;old_locus_tag=YPZ3_3113 NC_014029.1 Protein Homology CDS 3992755 3993336 . + 0 ID=cds3623;Parent=gene3687;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11 NC_014029.1 RefSeq gene 3993351 3994487 . + . ID=gene3688;Name=YPZ3_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18475;old_locus_tag=YPZ3_3114 NC_014029.1 Protein Homology CDS 3993351 3994487 . + 0 ID=cds3624;Parent=gene3688;Dbxref=Genbank:WP_002220949.1;Name=WP_002220949.1;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_002220949.1;transl_table=11 NC_014029.1 RefSeq gene 3994506 3995654 . + . ID=gene3689;Name=YPZ3_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18480;old_locus_tag=YPZ3_3115 NC_014029.1 Protein Homology CDS 3994506 3995654 . + 0 ID=cds3625;Parent=gene3689;Dbxref=Genbank:WP_002210034.1;Name=WP_002210034.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_002210034.1;transl_table=11 NC_014029.1 RefSeq gene 3995666 3996460 . + . ID=gene3690;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YPZ3_RS18485;old_locus_tag=YPZ3_3116 NC_014029.1 Protein Homology CDS 3995666 3996460 . + 0 ID=cds3626;Parent=gene3690;Dbxref=Genbank:WP_002213853.1;Name=WP_002213853.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_002213853.1;transl_table=11 NC_014029.1 RefSeq gene 3996457 3997272 . + . ID=gene3691;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YPZ3_RS18490;old_locus_tag=YPZ3_3117 NC_014029.1 Protein Homology CDS 3996457 3997272 . + 0 ID=cds3627;Parent=gene3691;Dbxref=Genbank:WP_002210036.1;Name=WP_002210036.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_002210036.1;transl_table=11 NC_014029.1 RefSeq repeat_region 3997646 3997813 . + . ID=id295;gbkey=repeat_region NC_014029.1 RefSeq gene 3997891 3998094 . - . ID=gene3692;Name=YPZ3_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18495 NC_014029.1 Protein Homology CDS 3997891 3998094 . - 0 ID=cds3628;Parent=gene3692;Dbxref=Genbank:WP_002210038.1;Name=WP_002210038.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_002210038.1;transl_table=11 NC_014029.1 RefSeq gene 3998548 3999903 . + . ID=gene3693;Name=YPZ3_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18500;old_locus_tag=YPZ3_3118 NC_014029.1 Protein Homology CDS 3998548 3999903 . + 0 ID=cds3629;Parent=gene3693;Dbxref=Genbank:WP_002210039.1;Name=WP_002210039.1;gbkey=CDS;product=xanthine/uracil permease;protein_id=WP_002210039.1;transl_table=11 NC_014029.1 RefSeq gene 4000252 4001901 . + . ID=gene3694;Name=YPZ3_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18505;old_locus_tag=YPZ3_3119 NC_014029.1 Protein Homology CDS 4000252 4001901 . + 0 ID=cds3630;Parent=gene3694;Dbxref=Genbank:WP_013060351.1;Name=WP_013060351.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_013060351.1;transl_table=11 NC_014029.1 RefSeq gene 4002119 4003306 . - . ID=gene3695;Name=YPZ3_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18510;old_locus_tag=YPZ3_3120 NC_014029.1 Protein Homology CDS 4002119 4003306 . - 0 ID=cds3631;Parent=gene3695;Dbxref=Genbank:WP_002210041.1;Name=WP_002210041.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210041.1;transl_table=11 NC_014029.1 RefSeq gene 4003458 4004378 . - . ID=gene3696;Name=YPZ3_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18515;old_locus_tag=YPZ3_3121 NC_014029.1 Protein Homology CDS 4003458 4004378 . - 0 ID=cds3632;Parent=gene3696;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11 NC_014029.1 RefSeq gene 4005172 4006161 . + . ID=gene3697;Name=YPZ3_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18520;old_locus_tag=YPZ3_3122 NC_014029.1 Protein Homology CDS 4005172 4006161 . + 0 ID=cds3633;Parent=gene3697;Dbxref=Genbank:WP_002210043.1;Name=WP_002210043.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210043.1;transl_table=11 NC_014029.1 RefSeq gene 4006365 4007861 . + . ID=gene3698;Name=YPZ3_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18525;old_locus_tag=YPZ3_3123 NC_014029.1 Protein Homology CDS 4006365 4007861 . + 0 ID=cds3634;Parent=gene3698;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NC_014029.1 RefSeq gene 4007854 4008843 . + . ID=gene3699;Name=YPZ3_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18530;old_locus_tag=YPZ3_3124 NC_014029.1 Protein Homology CDS 4007854 4008843 . + 0 ID=cds3635;Parent=gene3699;Dbxref=Genbank:WP_002210045.1;Name=WP_002210045.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NC_014029.1 RefSeq gene 4008845 4009798 . + . ID=gene3700;Name=YPZ3_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18535;old_locus_tag=YPZ3_3125 NC_014029.1 Protein Homology CDS 4008845 4009798 . + 0 ID=cds3636;Parent=gene3700;Dbxref=Genbank:WP_002210046.1;Name=WP_002210046.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210046.1;transl_table=11 NC_014029.1 RefSeq gene 4009817 4011454 . + . ID=gene3701;Name=YPZ3_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18540;old_locus_tag=YPZ3_3126 NC_014029.1 Protein Homology CDS 4009817 4011454 . + 0 ID=cds3637;Parent=gene3701;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11 NC_014029.1 RefSeq gene 4011451 4012056 . + . ID=gene3702;Name=YPZ3_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18545;old_locus_tag=YPZ3_3127 NC_014029.1 Protein Homology CDS 4011451 4012056 . + 0 ID=cds3638;Parent=gene3702;Dbxref=Genbank:WP_002210048.1;Name=WP_002210048.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_002210048.1;transl_table=11 NC_014029.1 RefSeq gene 4012246 4013097 . - . ID=gene3703;Name=YPZ3_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18550;old_locus_tag=YPZ3_3128 NC_014029.1 Protein Homology CDS 4012246 4013097 . - 0 ID=cds3639;Parent=gene3703;Dbxref=Genbank:WP_002228699.1;Name=WP_002228699.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_002228699.1;transl_table=11 NC_014029.1 RefSeq gene 4013351 4014697 . + . ID=gene3704;Name=YPZ3_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18555;old_locus_tag=YPZ3_3129 NC_014029.1 Protein Homology CDS 4013351 4014697 . + 0 ID=cds3640;Parent=gene3704;Dbxref=Genbank:WP_002210050.1;Name=WP_002210050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210050.1;transl_table=11 NC_014029.1 RefSeq gene 4014804 4015979 . - . ID=gene3705;Name=YPZ3_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18560;old_locus_tag=YPZ3_3130 NC_014029.1 Protein Homology CDS 4014804 4015979 . - 0 ID=cds3641;Parent=gene3705;Dbxref=Genbank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_002210051.1;transl_table=11 NC_014029.1 RefSeq gene 4016218 4016394 . + . ID=gene3706;Name=YPZ3_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18565 NC_014029.1 Protein Homology CDS 4016218 4016394 . + 0 ID=cds3642;Parent=gene3706;Dbxref=Genbank:WP_025470774.1;Name=WP_025470774.1;gbkey=CDS;product=transposase;protein_id=WP_025470774.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4016235 4016952 . + . ID=id296;gbkey=repeat_region NC_014029.1 RefSeq gene 4016384 4016842 . + . ID=gene3707;Name=YPZ3_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18570;old_locus_tag=YPZ3_3131 NC_014029.1 Protein Homology CDS 4016384 4016842 . + 0 ID=cds3643;Parent=gene3707;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 cmsearch region 4016998 4017411 . - . ID=id297;Note=cspA;gbkey=misc_feature NC_014029.1 RefSeq gene 4017025 4017237 . - . ID=gene3708;Name=YPZ3_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18575 NC_014029.1 Protein Homology CDS 4017025 4017237 . - 0 ID=cds3644;Parent=gene3708;Dbxref=Genbank:WP_002210052.1;Name=WP_002210052.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210052.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4017053 4017255 . + . ID=id298;gbkey=repeat_region NC_014029.1 cmsearch region 4017446 4017888 . - . ID=id299;Note=cspA;gbkey=misc_feature NC_014029.1 RefSeq gene 4017497 4017709 . - . ID=gene3709;Name=YPZ3_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18580 NC_014029.1 Protein Homology CDS 4017497 4017709 . - 0 ID=cds3645;Parent=gene3709;Dbxref=Genbank:WP_002210053.1;Name=WP_002210053.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210053.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4017525 4017727 . + . ID=id300;gbkey=repeat_region NC_014029.1 RefSeq gene 4017802 4017951 . - . ID=gene3710;Name=YPZ3_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18585 NC_014029.1 Protein Homology CDS 4017802 4017951 . - 0 ID=cds3646;Parent=gene3710;Dbxref=Genbank:WP_002374696.1;Name=WP_002374696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002374696.1;transl_table=11 NC_014029.1 RefSeq gene 4018242 4018709 . - . ID=gene3711;Name=YPZ3_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18590;old_locus_tag=YPZ3_3132 NC_014029.1 Protein Homology CDS 4018242 4018709 . - 0 ID=cds3647;Parent=gene3711;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11 NC_014029.1 RefSeq gene 4019185 4019997 . + . ID=gene3712;Name=YPZ3_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18595;old_locus_tag=YPZ3_3133 NC_014029.1 Protein Homology CDS 4019185 4019997 . + 0 ID=cds3648;Parent=gene3712;Dbxref=Genbank:WP_002210055.1;Name=WP_002210055.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002210055.1;transl_table=11 NC_014029.1 RefSeq gene 4020062 4020952 . + . ID=gene3713;Name=YPZ3_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18600;old_locus_tag=YPZ3_3134 NC_014029.1 Protein Homology CDS 4020062 4020952 . + 0 ID=cds3649;Parent=gene3713;Dbxref=Genbank:WP_002210056.1;Name=WP_002210056.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_002210056.1;transl_table=11 NC_014029.1 RefSeq gene 4021130 4021525 . + . ID=gene3714;Name=YPZ3_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18605;old_locus_tag=YPZ3_3135 NC_014029.1 Protein Homology CDS 4021130 4021525 . + 0 ID=cds3650;Parent=gene3714;Dbxref=Genbank:WP_002217470.1;Name=WP_002217470.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_002217470.1;transl_table=11 NC_014029.1 RefSeq gene 4021679 4023043 . + . ID=gene3715;Name=YPZ3_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18610;old_locus_tag=YPZ3_3136 NC_014029.1 Protein Homology CDS 4021679 4023043 . + 0 ID=cds3651;Parent=gene3715;Dbxref=Genbank:WP_002210058.1;Name=WP_002210058.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210058.1;transl_table=11 NC_014029.1 RefSeq gene 4023133 4023795 . + . ID=gene3716;Name=YPZ3_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18615;old_locus_tag=YPZ3_3137 NC_014029.1 Protein Homology CDS 4023133 4023795 . + 0 ID=cds3652;Parent=gene3716;Dbxref=Genbank:WP_002210059.1;Name=WP_002210059.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210059.1;transl_table=11 NC_014029.1 RefSeq gene 4023861 4024337 . + . ID=gene3717;Name=YPZ3_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18620;old_locus_tag=YPZ3_3138 NC_014029.1 Protein Homology CDS 4023861 4024337 . + 0 ID=cds3653;Parent=gene3717;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4024497 4024979 . + . ID=id301;gbkey=repeat_region NC_014029.1 RefSeq gene 4025091 4025387 . - . ID=gene3718;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YPZ3_RS18625 NC_014029.1 Protein Homology CDS 4025091 4025387 . - 0 ID=cds3654;Parent=gene3718;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11 NC_014029.1 RefSeq gene 4025412 4026377 . - . ID=gene3719;Name=YPZ3_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18630;old_locus_tag=YPZ3_3139 NC_014029.1 Protein Homology CDS 4025412 4026377 . - 0 ID=cds3655;Parent=gene3719;Dbxref=Genbank:WP_002210062.1;Name=WP_002210062.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_002210062.1;transl_table=11 NC_014029.1 RefSeq gene 4026966 4027847 . - . ID=gene3720;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YPZ3_RS18635;old_locus_tag=YPZ3_3140 NC_014029.1 Protein Homology CDS 4026966 4027847 . - 0 ID=cds3656;Parent=gene3720;Dbxref=Genbank:WP_002220963.1;Name=WP_002220963.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NC_014029.1 RefSeq gene 4027923 4029377 . - . ID=gene3721;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YPZ3_RS18640;old_locus_tag=YPZ3_3141 NC_014029.1 Protein Homology CDS 4027923 4029377 . - 0 ID=cds3657;Parent=gene3721;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NC_014029.1 RefSeq gene 4029367 4029609 . - . ID=gene3722;Name=YPZ3_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18645 NC_014029.1 Protein Homology CDS 4029367 4029609 . - 0 ID=cds3658;Parent=gene3722;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4029624 4029924 . + . ID=id302;gbkey=repeat_region NC_014029.1 RefSeq gene 4030967 4032316 . - . ID=gene3723;Name=YPZ3_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18650;old_locus_tag=YPZ3_3142 NC_014029.1 Protein Homology CDS 4030967 4032316 . - 0 ID=cds3659;Parent=gene3723;Dbxref=Genbank:WP_002210069.1;Name=WP_002210069.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002210069.1;transl_table=11 NC_014029.1 RefSeq gene 4032328 4032792 . - . ID=gene3724;Name=YPZ3_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18655;old_locus_tag=YPZ3_3143 NC_014029.1 Protein Homology CDS 4032328 4032792 . - 0 ID=cds3660;Parent=gene3724;Dbxref=Genbank:WP_002210070.1;Name=WP_002210070.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_002210070.1;transl_table=11 NC_014029.1 RefSeq gene 4032950 4033402 . - . ID=gene3725;Name=YPZ3_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18660;old_locus_tag=YPZ3_3144 NC_014029.1 Protein Homology CDS 4032950 4033402 . - 0 ID=cds3661;Parent=gene3725;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NC_014029.1 RefSeq gene 4033665 4034285 . - . ID=gene3726;Name=YPZ3_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18665;old_locus_tag=YPZ3_3145 NC_014029.1 Protein Homology CDS 4033665 4034285 . - 0 ID=cds3662;Parent=gene3726;Dbxref=Genbank:WP_002210072.1;Name=WP_002210072.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_002210072.1;transl_table=11 NC_014029.1 RefSeq gene 4034285 4035385 . - . ID=gene3727;Name=YPZ3_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18670;old_locus_tag=YPZ3_3146 NC_014029.1 Protein Homology CDS 4034285 4035385 . - 0 ID=cds3663;Parent=gene3727;Dbxref=Genbank:WP_002210073.1;Name=WP_002210073.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfoxide reductase catalytic subunit YedY;protein_id=WP_002210073.1;transl_table=11 NC_014029.1 RefSeq gene 4035608 4036585 . - . ID=gene3728;Name=YPZ3_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18675;old_locus_tag=YPZ3_3147 NC_014029.1 Protein Homology CDS 4035608 4036585 . - 0 ID=cds3664;Parent=gene3728;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11 NC_014029.1 RefSeq gene 4036986 4038902 . + . ID=gene3729;Name=YPZ3_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18680;old_locus_tag=YPZ3_3148 NC_014029.1 Protein Homology CDS 4036986 4038902 . + 0 ID=cds3665;Parent=gene3729;Dbxref=Genbank:WP_002210075.1;Name=WP_002210075.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210075.1;transl_table=11 NC_014029.1 RefSeq gene 4039239 4040282 . + . ID=gene3730;Name=YPZ3_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18685;old_locus_tag=YPZ3_3149 NC_014029.1 Protein Homology CDS 4039239 4040282 . + 0 ID=cds3666;Parent=gene3730;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NC_014029.1 RefSeq gene 4040486 4041481 . + . ID=gene3731;Name=YPZ3_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18690;old_locus_tag=YPZ3_3150 NC_014029.1 Protein Homology CDS 4040486 4041481 . + 0 ID=cds3667;Parent=gene3731;Dbxref=Genbank:WP_002210076.1;Name=WP_002210076.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NC_014029.1 RefSeq gene 4041478 4041966 . + . ID=gene3732;Name=YPZ3_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18695;old_locus_tag=YPZ3_3151 NC_014029.1 Protein Homology CDS 4041478 4041966 . + 0 ID=cds3668;Parent=gene3732;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NC_014029.1 RefSeq gene 4041980 4042573 . + . ID=gene3733;Name=YPZ3_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18700;old_locus_tag=YPZ3_3152 NC_014029.1 Protein Homology CDS 4041980 4042573 . + 0 ID=cds3669;Parent=gene3733;Dbxref=Genbank:WP_002210078.1;Name=WP_002210078.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210078.1;transl_table=11 NC_014029.1 RefSeq gene 4042563 4044032 . + . ID=gene3734;Name=YPZ3_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18705;old_locus_tag=YPZ3_3153 NC_014029.1 Protein Homology CDS 4042563 4044032 . + 0 ID=cds3670;Parent=gene3734;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NC_014029.1 RefSeq gene 4044147 4048049 . + . ID=gene3735;Name=YPZ3_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18710;old_locus_tag=YPZ3_3154 NC_014029.1 Protein Homology CDS 4044147 4048049 . + 0 ID=cds3671;Parent=gene3735;Dbxref=Genbank:WP_013060352.1;Name=WP_013060352.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060352.1;transl_table=11 NC_014029.1 RefSeq gene 4048046 4048915 . + . ID=gene3736;Name=YPZ3_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18715;old_locus_tag=YPZ3_3155 NC_014029.1 Protein Homology CDS 4048046 4048915 . + 0 ID=cds3672;Parent=gene3736;Dbxref=Genbank:WP_002210081.1;Name=WP_002210081.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_002210081.1;transl_table=11 NC_014029.1 RefSeq gene 4048927 4050372 . + . ID=gene3737;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YPZ3_RS18720;old_locus_tag=YPZ3_3156 NC_014029.1 Protein Homology CDS 4048927 4050372 . + 0 ID=cds3673;Parent=gene3737;Dbxref=Genbank:WP_002210082.1;Name=WP_002210082.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_002210082.1;transl_table=11 NC_014029.1 RefSeq gene 4050575 4053433 . - . ID=gene3738;Name=YPZ3_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18725;old_locus_tag=YPZ3_3157 NC_014029.1 Protein Homology CDS 4050575 4053433 . - 0 ID=cds3674;Parent=gene3738;Dbxref=Genbank:WP_002210083.1;Name=WP_002210083.1;gbkey=CDS;product=toxin;protein_id=WP_002210083.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4051458 4053406 . + . ID=id303;gbkey=repeat_region NC_014029.1 RefSeq gene 4053458 4056289 . - . ID=gene3739;Name=YPZ3_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18730;old_locus_tag=YPZ3_3158 NC_014029.1 Protein Homology CDS 4053458 4056289 . - 0 ID=cds3675;Parent=gene3739;Dbxref=Genbank:WP_002210084.1;Name=WP_002210084.1;gbkey=CDS;product=toxin;protein_id=WP_002210084.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4054314 4056262 . + . ID=id304;gbkey=repeat_region NC_014029.1 RefSeq gene 4056490 4056849 . - . ID=gene3740;Name=YPZ3_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18740;old_locus_tag=YPZ3_3159 NC_014029.1 Protein Homology CDS 4056490 4056849 . - 0 ID=cds3676;Parent=gene3740;Dbxref=Genbank:WP_002210086.1;Name=WP_002210086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210086.1;transl_table=11 NC_014029.1 RefSeq gene 4056846 4057247 . - . ID=gene3741;Name=YPZ3_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18745;old_locus_tag=YPZ3_3160 NC_014029.1 Protein Homology CDS 4056846 4057247 . - 0 ID=cds3677;Parent=gene3741;Dbxref=Genbank:WP_002210087.1;Name=WP_002210087.1;gbkey=CDS;product=peptidase M15;protein_id=WP_002210087.1;transl_table=11 NC_014029.1 RefSeq gene 4057260 4057562 . - . ID=gene3742;Name=YPZ3_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18750;old_locus_tag=YPZ3_3161 NC_014029.1 Protein Homology CDS 4057260 4057562 . - 0 ID=cds3678;Parent=gene3742;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11 NC_014029.1 RefSeq gene 4057696 4062186 . - . ID=gene3743;Name=YPZ3_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18755;old_locus_tag=YPZ3_3162 NC_014029.1 Protein Homology CDS 4057696 4062186 . - 0 ID=cds3679;Parent=gene3743;Dbxref=Genbank:WP_002210089.1;Name=WP_002210089.1;gbkey=CDS;product=toxin;protein_id=WP_002210089.1;transl_table=11 NC_014029.1 RefSeq gene 4062243 4064384 . - . ID=gene3744;Name=YPZ3_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18760;old_locus_tag=YPZ3_3163 NC_014029.1 Protein Homology CDS 4062243 4064384 . - 0 ID=cds3680;Parent=gene3744;Dbxref=Genbank:WP_002229661.1;Name=WP_002229661.1;gbkey=CDS;product=toxin subunit;protein_id=WP_002229661.1;transl_table=11 NC_014029.1 RefSeq gene 4064453 4065835 . - . ID=gene3745;Name=YPZ3_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18765;old_locus_tag=YPZ3_3164 NC_014029.1 Protein Homology CDS 4064453 4065835 . - 0 ID=cds3681;Parent=gene3745;Dbxref=Genbank:WP_002229660.1;Name=WP_002229660.1;gbkey=CDS;product=toxin subunit;protein_id=WP_002229660.1;transl_table=11 NC_014029.1 RefSeq gene 4065876 4068377 . - . ID=gene3746;Name=YPZ3_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18770;old_locus_tag=YPZ3_3165 NC_014029.1 Protein Homology CDS 4065876 4068377 . - 0 ID=cds3682;Parent=gene3746;Dbxref=Genbank:WP_002210090.1;Name=WP_002210090.1;gbkey=CDS;product=toxin;protein_id=WP_002210090.1;transl_table=11 NC_014029.1 RefSeq gene 4068613 4069479 . - . ID=gene3747;Name=YPZ3_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18775;old_locus_tag=YPZ3_3166 NC_014029.1 Protein Homology CDS 4068613 4069479 . - 0 ID=cds3683;Parent=gene3747;Dbxref=Genbank:WP_002214297.1;Name=WP_002214297.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002214297.1;transl_table=11 NC_014029.1 RefSeq gene 4069740 4070651 . - . ID=gene3748;Name=YPZ3_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18780;old_locus_tag=YPZ3_3167 NC_014029.1 Protein Homology CDS 4069740 4070651 . - 0 ID=cds3684;Parent=gene3748;Dbxref=Genbank:WP_002210092.1;Name=WP_002210092.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210092.1;transl_table=11 NC_014029.1 RefSeq gene 4070954 4071157 . + . ID=gene3749;Name=YPZ3_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18785 NC_014029.1 Protein Homology CDS 4070954 4071157 . + 0 ID=cds3685;Parent=gene3749;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11 NC_014029.1 RefSeq gene 4071165 4072100 . + . ID=gene3750;Name=YPZ3_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18790;old_locus_tag=YPZ3_3168 NC_014029.1 Protein Homology CDS 4071165 4072100 . + 0 ID=cds3686;Parent=gene3750;Dbxref=Genbank:WP_002210094.1;Name=WP_002210094.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NC_014029.1 RefSeq gene 4072102 4074057 . + . ID=gene3751;Name=YPZ3_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18795;old_locus_tag=YPZ3_3169 NC_014029.1 Protein Homology CDS 4072102 4074057 . + 0 ID=cds3687;Parent=gene3751;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NC_014029.1 RefSeq gene 4074324 4075457 . + . ID=gene3752;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YPZ3_RS18800;old_locus_tag=YPZ3_3170 NC_014029.1 Protein Homology CDS 4074324 4075457 . + 0 ID=cds3688;Parent=gene3752;Dbxref=Genbank:WP_002214290.1;Name=WP_002214290.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_002214290.1;transl_table=11 NC_014029.1 RefSeq gene 4075454 4075792 . + . ID=gene3753;Name=YPZ3_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18805;old_locus_tag=YPZ3_3171 NC_014029.1 Protein Homology CDS 4075454 4075792 . + 0 ID=cds3689;Parent=gene3753;Dbxref=Genbank:WP_002214289.1;Name=WP_002214289.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002214289.1;transl_table=11 NC_014029.1 RefSeq gene 4075987 4076460 . + . ID=gene3754;Name=YPZ3_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18810;old_locus_tag=YPZ3_3172 NC_014029.1 Protein Homology CDS 4075987 4076460 . + 0 ID=cds3690;Parent=gene3754;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11 NC_014029.1 RefSeq gene 4076465 4076746 . + . ID=gene3755;Name=YPZ3_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18815 NC_014029.1 Protein Homology CDS 4076465 4076746 . + 0 ID=cds3691;Parent=gene3755;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11 NC_014029.1 RefSeq gene 4076858 4077406 . - . ID=gene3756;Name=YPZ3_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18820;old_locus_tag=YPZ3_3173 NC_014029.1 Protein Homology CDS 4076858 4077406 . - 0 ID=cds3692;Parent=gene3756;Dbxref=Genbank:WP_002210099.1;Name=WP_002210099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210099.1;transl_table=11 NC_014029.1 RefSeq gene 4077587 4078927 . + . ID=gene3757;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YPZ3_RS18825;old_locus_tag=YPZ3_3174 NC_014029.1 Protein Homology CDS 4077587 4078927 . + 0 ID=cds3693;Parent=gene3757;Dbxref=Genbank:WP_002210100.1;Name=WP_002210100.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_002210100.1;transl_table=11 NC_014029.1 RefSeq gene 4079176 4079820 . + . ID=gene3758;Name=YPZ3_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18830;old_locus_tag=YPZ3_3175 NC_014029.1 Protein Homology CDS 4079176 4079820 . + 0 ID=cds3694;Parent=gene3758;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NC_014029.1 RefSeq gene 4080028 4080414 . + . ID=gene3759;Name=YPZ3_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18835;old_locus_tag=YPZ3_3176 NC_014029.1 Protein Homology CDS 4080028 4080414 . + 0 ID=cds3695;Parent=gene3759;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11 NC_014029.1 RefSeq gene 4080646 4081056 . - . ID=gene3760;Name=YPZ3_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18840;old_locus_tag=YPZ3_3177 NC_014029.1 Protein Homology CDS 4080646 4081056 . - 0 ID=cds3696;Parent=gene3760;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NC_014029.1 RefSeq gene 4081409 4083076 . - . ID=gene3761;Name=YPZ3_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18845;old_locus_tag=YPZ3_3178 NC_014029.1 Protein Homology CDS 4081409 4083076 . - 0 ID=cds3697;Parent=gene3761;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11 NC_014029.1 RefSeq gene 4083171 4084586 . - . ID=gene3762;Name=YPZ3_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18850;old_locus_tag=YPZ3_3179 NC_014029.1 Protein Homology CDS 4083171 4084586 . - 0 ID=cds3698;Parent=gene3762;Dbxref=Genbank:WP_002215779.1;Name=WP_002215779.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_002215779.1;transl_table=11 NC_014029.1 RefSeq gene 4084997 4085950 . - . ID=gene3763;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YPZ3_RS18855;old_locus_tag=YPZ3_3180 NC_014029.1 Protein Homology CDS 4084997 4085950 . - 0 ID=cds3699;Parent=gene3763;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11 NC_014029.1 RefSeq gene 4086184 4086660 . - . ID=gene3764;Name=YPZ3_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18860;old_locus_tag=YPZ3_3181 NC_014029.1 Protein Homology CDS 4086184 4086660 . - 0 ID=cds3700;Parent=gene3764;Dbxref=Genbank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210107.1;transl_table=11 NC_014029.1 RefSeq gene 4086959 4087345 . - . ID=gene3765;Name=YPZ3_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18865;old_locus_tag=YPZ3_3182 NC_014029.1 Protein Homology CDS 4086959 4087345 . - 0 ID=cds3701;Parent=gene3765;Dbxref=Genbank:WP_002210109.1;Name=WP_002210109.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210109.1;transl_table=11 NC_014029.1 RefSeq gene 4087483 4087947 . - . ID=gene3766;Name=YPZ3_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18870;old_locus_tag=YPZ3_3183 NC_014029.1 Protein Homology CDS 4087483 4087947 . - 0 ID=cds3702;Parent=gene3766;Dbxref=Genbank:WP_002210110.1;Name=WP_002210110.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_002210110.1;transl_table=11 NC_014029.1 RefSeq gene 4087959 4088894 . - . ID=gene3767;Name=YPZ3_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18875;old_locus_tag=YPZ3_3184 NC_014029.1 Protein Homology CDS 4087959 4088894 . - 0 ID=cds3703;Parent=gene3767;Dbxref=Genbank:WP_002210111.1;Name=WP_002210111.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_002210111.1;transl_table=11 NC_014029.1 RefSeq gene 4089232 4089504 . - . ID=gene3768;Name=YPZ3_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18880 NC_014029.1 Protein Homology CDS 4089232 4089504 . - 0 ID=cds3704;Parent=gene3768;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11 NC_014029.1 RefSeq gene 4089501 4090355 . - . ID=gene3769;Name=YPZ3_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18885;old_locus_tag=YPZ3_3185 NC_014029.1 Protein Homology CDS 4089501 4090355 . - 0 ID=cds3705;Parent=gene3769;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11 NC_014029.1 RefSeq gene 4090661 4091143 . - . ID=gene3770;Name=YPZ3_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18890;old_locus_tag=YPZ3_3186 NC_014029.1 Protein Homology CDS 4090661 4091143 . - 0 ID=cds3706;Parent=gene3770;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11 NC_014029.1 RefSeq gene 4091261 4091548 . - . ID=gene3771;Name=YPZ3_RS18895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS18895;pseudo=true NC_014029.1 Protein Homology CDS 4091261 4091548 . - 0 ID=cds3707;Parent=gene3771;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(4091441..4091443)%2Caa:Other);transl_table=11 NC_014029.1 RefSeq gene 4091572 4093005 . - . ID=gene3772;Name=YPZ3_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18900;old_locus_tag=YPZ3_3187 NC_014029.1 Protein Homology CDS 4091572 4093005 . - 0 ID=cds3708;Parent=gene3772;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11 NC_014029.1 RefSeq gene 4093067 4093792 . - . ID=gene3773;Name=YPZ3_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18905;old_locus_tag=YPZ3_3188 NC_014029.1 Protein Homology CDS 4093067 4093792 . - 0 ID=cds3709;Parent=gene3773;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NC_014029.1 RefSeq gene 4093799 4094344 . - . ID=gene3774;Name=YPZ3_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18910;old_locus_tag=YPZ3_3189 NC_014029.1 Protein Homology CDS 4093799 4094344 . - 0 ID=cds3710;Parent=gene3774;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11 NC_014029.1 RefSeq gene 4094328 4094891 . - . ID=gene3775;Name=YPZ3_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18915;old_locus_tag=YPZ3_3190 NC_014029.1 Protein Homology CDS 4094328 4094891 . - 0 ID=cds3711;Parent=gene3775;Dbxref=Genbank:WP_002218352.1;Name=WP_002218352.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002218352.1;transl_table=11 NC_014029.1 RefSeq gene 4094888 4095451 . - . ID=gene3776;Name=YPZ3_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18920;old_locus_tag=YPZ3_3191 NC_014029.1 Protein Homology CDS 4094888 4095451 . - 0 ID=cds3712;Parent=gene3776;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NC_014029.1 RefSeq gene 4095700 4096686 . - . ID=gene3777;Name=YPZ3_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18925;old_locus_tag=YPZ3_3192 NC_014029.1 Protein Homology CDS 4095700 4096686 . - 0 ID=cds3713;Parent=gene3777;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NC_014029.1 RefSeq gene 4096797 4097771 . - . ID=gene3778;Name=YPZ3_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18930;old_locus_tag=YPZ3_3193 NC_014029.1 Protein Homology CDS 4096797 4097771 . - 0 ID=cds3714;Parent=gene3778;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11 NC_014029.1 RefSeq gene 4098036 4098854 . + . ID=gene3779;Name=YPZ3_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18935;old_locus_tag=YPZ3_3194 NC_014029.1 Protein Homology CDS 4098036 4098854 . + 0 ID=cds3715;Parent=gene3779;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11 NC_014029.1 RefSeq gene 4099072 4099854 . + . ID=gene3780;Name=YPZ3_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18940;old_locus_tag=YPZ3_3195 NC_014029.1 Protein Homology CDS 4099072 4099854 . + 0 ID=cds3716;Parent=gene3780;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11 NC_014029.1 RefSeq gene 4099859 4100416 . + . ID=gene3781;Name=YPZ3_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18945;old_locus_tag=YPZ3_3196 NC_014029.1 Protein Homology CDS 4099859 4100416 . + 0 ID=cds3717;Parent=gene3781;Dbxref=Genbank:WP_002210123.1;Name=WP_002210123.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_002210123.1;transl_table=11 NC_014029.1 RefSeq gene 4100429 4101052 . + . ID=gene3782;Name=YPZ3_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18950;old_locus_tag=YPZ3_3197 NC_014029.1 Protein Homology CDS 4100429 4101052 . + 0 ID=cds3718;Parent=gene3782;Dbxref=Genbank:WP_002210124.1;Name=WP_002210124.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter substrate-binding protein;protein_id=WP_002210124.1;transl_table=11 NC_014029.1 RefSeq gene 4101088 4101390 . + . ID=gene3783;Name=YPZ3_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18955;old_locus_tag=YPZ3_3198 NC_014029.1 Protein Homology CDS 4101088 4101390 . + 0 ID=cds3719;Parent=gene3783;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11 NC_014029.1 RefSeq gene 4101537 4101791 . + . ID=gene3784;Name=YPZ3_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18960 NC_014029.1 Protein Homology CDS 4101537 4101791 . + 0 ID=cds3720;Parent=gene3784;Dbxref=Genbank:WP_002210126.1;Name=WP_002210126.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210126.1;transl_table=11 NC_014029.1 RefSeq gene 4101945 4103207 . + . ID=gene3785;Name=YPZ3_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18965;old_locus_tag=YPZ3_3199 NC_014029.1 Protein Homology CDS 4101945 4103207 . + 0 ID=cds3721;Parent=gene3785;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NC_014029.1 RefSeq gene 4103388 4104476 . - . ID=gene3786;Name=YPZ3_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18970;old_locus_tag=YPZ3_3200 NC_014029.1 Protein Homology CDS 4103388 4104476 . - 0 ID=cds3722;Parent=gene3786;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4104554 4105271 . + . ID=id305;gbkey=repeat_region NC_014029.1 RefSeq gene 4104702 4105160 . + . ID=gene3787;Name=YPZ3_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18975;old_locus_tag=YPZ3_3201 NC_014029.1 Protein Homology CDS 4104702 4105160 . + 0 ID=cds3723;Parent=gene3787;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 4105277 4106650 . - . ID=gene3788;Name=YPZ3_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18980;old_locus_tag=YPZ3_3202 NC_014029.1 Protein Homology CDS 4105277 4106650 . - 0 ID=cds3724;Parent=gene3788;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11 NC_014029.1 RefSeq gene 4106921 4107325 . - . ID=gene3789;Name=YPZ3_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18985;old_locus_tag=YPZ3_3203 NC_014029.1 Protein Homology CDS 4106921 4107325 . - 0 ID=cds3725;Parent=gene3789;Dbxref=Genbank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210130.1;transl_table=11 NC_014029.1 RefSeq gene 4107549 4108676 . + . ID=gene3790;Name=YPZ3_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18990;old_locus_tag=YPZ3_3204 NC_014029.1 Protein Homology CDS 4107549 4108676 . + 0 ID=cds3726;Parent=gene3790;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11 NC_014029.1 RefSeq gene 4108990 4109418 . + . ID=gene3791;Name=YPZ3_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS18995;old_locus_tag=YPZ3_3205 NC_014029.1 Protein Homology CDS 4108990 4109418 . + 0 ID=cds3727;Parent=gene3791;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NC_014029.1 RefSeq gene 4109433 4109825 . + . ID=gene3792;Name=YPZ3_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19000;old_locus_tag=YPZ3_3206 NC_014029.1 Protein Homology CDS 4109433 4109825 . + 0 ID=cds3728;Parent=gene3792;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NC_014029.1 RefSeq gene 4109822 4110019 . - . ID=gene3793;Name=YPZ3_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19005 NC_014029.1 Protein Homology CDS 4109822 4110019 . - 0 ID=cds3729;Parent=gene3793;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NC_014029.1 RefSeq gene 4110199 4110840 . + . ID=gene3794;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YPZ3_RS19010;old_locus_tag=YPZ3_3207 NC_014029.1 Protein Homology CDS 4110199 4110840 . + 0 ID=cds3730;Parent=gene3794;Dbxref=Genbank:WP_002210135.1;Name=WP_002210135.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_002210135.1;transl_table=11 NC_014029.1 RefSeq gene 4110846 4111361 . + . ID=gene3795;Name=YPZ3_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19015;old_locus_tag=YPZ3_3208 NC_014029.1 Protein Homology CDS 4110846 4111361 . + 0 ID=cds3731;Parent=gene3795;Dbxref=Genbank:WP_002216203.1;Name=WP_002216203.1;gbkey=CDS;product=peptidase;protein_id=WP_002216203.1;transl_table=11 NC_014029.1 RefSeq gene 4111514 4111999 . - . ID=gene3796;Name=YPZ3_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19020;old_locus_tag=YPZ3_3209 NC_014029.1 Protein Homology CDS 4111514 4111999 . - 0 ID=cds3732;Parent=gene3796;Dbxref=Genbank:WP_002210137.1;Name=WP_002210137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210137.1;transl_table=11 NC_014029.1 RefSeq gene 4112440 4113858 . - . ID=gene3797;Name=YPZ3_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19025;old_locus_tag=YPZ3_3210 NC_014029.1 Protein Homology CDS 4112440 4113858 . - 0 ID=cds3733;Parent=gene3797;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11 NC_014029.1 RefSeq gene 4113868 4118334 . - . ID=gene3798;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19030;old_locus_tag=YPZ3_3211 NC_014029.1 Protein Homology CDS 4113868 4118334 . - 0 ID=cds3734;Parent=gene3798;Dbxref=Genbank:WP_002229651.1;Name=WP_002229651.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_002229651.1;transl_table=11 NC_014029.1 RefSeq gene 4119157 4120080 . + . ID=gene3799;Name=YPZ3_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19035;old_locus_tag=YPZ3_3212 NC_014029.1 Protein Homology CDS 4119157 4120080 . + 0 ID=cds3735;Parent=gene3799;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11 NC_014029.1 RefSeq gene 4120061 4120276 . + . ID=gene3800;Name=YPZ3_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19040 NC_014029.1 Protein Homology CDS 4120061 4120276 . + 0 ID=cds3736;Parent=gene3800;Dbxref=Genbank:WP_002216211.1;Name=WP_002216211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216211.1;transl_table=11 NC_014029.1 RefSeq gene 4120344 4122680 . + . ID=gene3801;Name=YPZ3_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19045;old_locus_tag=YPZ3_3213 NC_014029.1 Protein Homology CDS 4120344 4122680 . + 0 ID=cds3737;Parent=gene3801;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11 NC_014029.1 RefSeq gene 4122698 4122892 . + . ID=gene3802;Name=YPZ3_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19050 NC_014029.1 Protein Homology CDS 4122698 4122892 . + 0 ID=cds3738;Parent=gene3802;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11 NC_014029.1 RefSeq gene 4122922 4123575 . + . ID=gene3803;Name=YPZ3_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19055;old_locus_tag=YPZ3_3214 NC_014029.1 Protein Homology CDS 4122922 4123575 . + 0 ID=cds3739;Parent=gene3803;Dbxref=Genbank:WP_002210143.1;Name=WP_002210143.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_002210143.1;transl_table=11 NC_014029.1 RefSeq gene 4123572 4124297 . + . ID=gene3804;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YPZ3_RS19060;old_locus_tag=YPZ3_3215 NC_014029.1 Protein Homology CDS 4123572 4124297 . + 0 ID=cds3740;Parent=gene3804;Dbxref=Genbank:WP_002210144.1;Name=WP_002210144.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_002210144.1;transl_table=11 NC_014029.1 RefSeq gene 4124504 4125079 . - . ID=gene3805;Name=YPZ3_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19065;old_locus_tag=YPZ3_3216 NC_014029.1 Protein Homology CDS 4124504 4125079 . - 0 ID=cds3741;Parent=gene3805;Dbxref=Genbank:WP_002210145.1;Name=WP_002210145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210145.1;transl_table=11 NC_014029.1 RefSeq gene 4125090 4125680 . - . ID=gene3806;Name=YPZ3_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19070;old_locus_tag=YPZ3_3217 NC_014029.1 Protein Homology CDS 4125090 4125680 . - 0 ID=cds3742;Parent=gene3806;Dbxref=Genbank:WP_002210146.1;Name=WP_002210146.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_002210146.1;transl_table=11 NC_014029.1 RefSeq gene 4125951 4126304 . - . ID=gene3807;Name=YPZ3_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19075;old_locus_tag=YPZ3_3218 NC_014029.1 Protein Homology CDS 4125951 4126304 . - 0 ID=cds3743;Parent=gene3807;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11 NC_014029.1 RefSeq gene 4126388 4128361 . - . ID=gene3808;Name=YPZ3_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19080;old_locus_tag=YPZ3_3219 NC_014029.1 Protein Homology CDS 4126388 4128361 . - 0 ID=cds3744;Parent=gene3808;Dbxref=Genbank:WP_002228200.1;Name=WP_002228200.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_002228200.1;transl_table=11 NC_014029.1 RefSeq gene 4128424 4129323 . + . ID=gene3809;Name=YPZ3_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19085;old_locus_tag=YPZ3_3220 NC_014029.1 Protein Homology CDS 4128424 4129323 . + 0 ID=cds3745;Parent=gene3809;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NC_014029.1 RefSeq gene 4129343 4129721 . + . ID=gene3810;Name=YPZ3_RS22180;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=YPZ3_RS22180 NC_014029.1 cmsearch ncRNA 4129343 4129721 . + . ID=rna58;Parent=gene3810;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_014029.1 cmsearch exon 4129343 4129721 . + . ID=id306;Parent=rna58;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_014029.1 RefSeq repeat_region 4129699 4130226 . + . ID=id307;gbkey=repeat_region NC_014029.1 RefSeq gene 4130260 4130964 . - . ID=gene3811;Name=YPZ3_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19090;old_locus_tag=YPZ3_3221 NC_014029.1 Protein Homology CDS 4130260 4130964 . - 0 ID=cds3746;Parent=gene3811;Dbxref=Genbank:WP_002210150.1;Name=WP_002210150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210150.1;transl_table=11 NC_014029.1 RefSeq gene 4131226 4132119 . + . ID=gene3812;Name=YPZ3_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19095;old_locus_tag=YPZ3_3222 NC_014029.1 Protein Homology CDS 4131226 4132119 . + 0 ID=cds3747;Parent=gene3812;Dbxref=Genbank:WP_002210151.1;Name=WP_002210151.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11 NC_014029.1 RefSeq gene 4132250 4133187 . - . ID=gene3813;Name=YPZ3_RS19100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS19100;old_locus_tag=YPZ3_3223;pseudo=true NC_014029.1 Protein Homology CDS 4132250 4133187 . - 0 ID=cds3748;Parent=gene3813;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glutathionyl-hydroquinone reductase YqjG;pseudo=true;transl_table=11 NC_014029.1 RefSeq repeat_region 4133133 4135090 . + . ID=id308;gbkey=repeat_region NC_014029.1 RefSeq gene 4133200 4133979 . - . ID=gene3814;Name=YPZ3_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19105;old_locus_tag=YPZ3_3224 NC_014029.1 Protein Homology CDS 4133200 4133979 . - 0 ID=cds3749;Parent=gene3814;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 4133979 4135001 . - . ID=gene3815;Name=YPZ3_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19110;old_locus_tag=YPZ3_3225 NC_014029.1 Protein Homology CDS 4133979 4135001 . - 0 ID=cds3750;Parent=gene3815;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 4135058 4135759 . + . ID=gene3816;Name=YPZ3_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19115;old_locus_tag=YPZ3_3226 NC_014029.1 Protein Homology CDS 4135058 4135759 . + 0 ID=cds3751;Parent=gene3816;Dbxref=Genbank:WP_002210152.1;Name=WP_002210152.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_002210152.1;transl_table=11 NC_014029.1 RefSeq gene 4135834 4136112 . + . ID=gene3817;Name=YPZ3_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19120 NC_014029.1 Protein Homology CDS 4135834 4136112 . + 0 ID=cds3752;Parent=gene3817;Dbxref=Genbank:WP_002228199.1;Name=WP_002228199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228199.1;transl_table=11 NC_014029.1 RefSeq gene 4136126 4136518 . + . ID=gene3818;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YPZ3_RS19125;old_locus_tag=YPZ3_3227 NC_014029.1 Protein Homology CDS 4136126 4136518 . + 0 ID=cds3753;Parent=gene3818;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NC_014029.1 RefSeq gene 4136527 4136844 . + . ID=gene3819;Name=YPZ3_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19130 NC_014029.1 Protein Homology CDS 4136527 4136844 . + 0 ID=cds3754;Parent=gene3819;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11 NC_014029.1 RefSeq gene 4136849 4137076 . + . ID=gene3820;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YPZ3_RS19135 NC_014029.1 Protein Homology CDS 4136849 4137076 . + 0 ID=cds3755;Parent=gene3820;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NC_014029.1 RefSeq gene 4137116 4137568 . + . ID=gene3821;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YPZ3_RS19140;old_locus_tag=YPZ3_3228 NC_014029.1 Protein Homology CDS 4137116 4137568 . + 0 ID=cds3756;Parent=gene3821;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NC_014029.1 RefSeq gene 4137604 4137774 . + . ID=gene3822;Name=YPZ3_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19145 NC_014029.1 Protein Homology CDS 4137604 4137774 . + 0 ID=cds3757;Parent=gene3822;Dbxref=Genbank:WP_025470773.1;Name=WP_025470773.1;gbkey=CDS;product=transposase;protein_id=WP_025470773.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4137618 4138335 . + . ID=id309;gbkey=repeat_region NC_014029.1 RefSeq gene 4137764 4138222 . + . ID=gene3823;Name=YPZ3_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19150;old_locus_tag=YPZ3_3229 NC_014029.1 Protein Homology CDS 4137764 4138222 . + 0 ID=cds3758;Parent=gene3823;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 4138344 4138799 . - . ID=gene3824;Name=YPZ3_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19155;old_locus_tag=YPZ3_3230 NC_014029.1 Protein Homology CDS 4138344 4138799 . - 0 ID=cds3759;Parent=gene3824;Dbxref=Genbank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210157.1;transl_table=11 NC_014029.1 RefSeq gene 4138939 4139679 . - . ID=gene3825;Name=YPZ3_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19160;old_locus_tag=YPZ3_3231 NC_014029.1 Protein Homology CDS 4138939 4139679 . - 0 ID=cds3760;Parent=gene3825;Dbxref=Genbank:WP_002210158.1;Name=WP_002210158.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_002210158.1;transl_table=11 NC_014029.1 RefSeq gene 4140022 4140642 . + . ID=gene3826;Name=YPZ3_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19165;old_locus_tag=YPZ3_3232 NC_014029.1 Protein Homology CDS 4140022 4140642 . + 0 ID=cds3761;Parent=gene3826;Dbxref=Genbank:WP_002228198.1;Name=WP_002228198.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228198.1;transl_table=11 NC_014029.1 RefSeq gene 4140740 4141405 . - . ID=gene3827;Name=YPZ3_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19170;old_locus_tag=YPZ3_3233 NC_014029.1 Protein Homology CDS 4140740 4141405 . - 0 ID=cds3762;Parent=gene3827;Dbxref=Genbank:WP_002210159.1;Name=WP_002210159.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_002210159.1;transl_table=11 NC_014029.1 RefSeq gene 4141560 4143530 . - . ID=gene3828;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19175;old_locus_tag=YPZ3_3234 NC_014029.1 Protein Homology CDS 4141560 4143530 . - 0 ID=cds3763;Parent=gene3828;Dbxref=Genbank:WP_002210160.1;Name=WP_002210160.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=3'-nucleotidase;protein_id=WP_002210160.1;transl_table=11 NC_014029.1 RefSeq gene 4143965 4144705 . + . ID=gene3829;Name=YPZ3_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19180;old_locus_tag=YPZ3_3235 NC_014029.1 Protein Homology CDS 4143965 4144705 . + 0 ID=cds3764;Parent=gene3829;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11 NC_014029.1 RefSeq gene 4144708 4145271 . - . ID=gene3830;Name=YPZ3_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19185;old_locus_tag=YPZ3_3236 NC_014029.1 Protein Homology CDS 4144708 4145271 . - 0 ID=cds3765;Parent=gene3830;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11 NC_014029.1 RefSeq gene 4145607 4145819 . + . ID=gene3831;Name=YPZ3_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19190 NC_014029.1 Protein Homology CDS 4145607 4145819 . + 0 ID=cds3766;Parent=gene3831;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11 NC_014029.1 RefSeq gene 4145927 4147258 . - . ID=gene3832;Name=YPZ3_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19195;old_locus_tag=YPZ3_3237 NC_014029.1 Protein Homology CDS 4145927 4147258 . - 0 ID=cds3767;Parent=gene3832;Dbxref=Genbank:WP_002210164.1;Name=WP_002210164.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210164.1;transl_table=11 NC_014029.1 RefSeq gene 4147536 4148174 . - . ID=gene3833;Name=YPZ3_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19200;old_locus_tag=YPZ3_3238 NC_014029.1 Protein Homology CDS 4147536 4148174 . - 0 ID=cds3768;Parent=gene3833;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NC_014029.1 RefSeq gene 4148449 4150185 . + . ID=gene3834;Name=YPZ3_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19205;old_locus_tag=YPZ3_3239 NC_014029.1 Protein Homology CDS 4148449 4150185 . + 0 ID=cds3769;Parent=gene3834;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11 NC_014029.1 RefSeq gene 4150182 4154099 . + . ID=gene3835;Name=YPZ3_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19210;old_locus_tag=YPZ3_3240 NC_014029.1 Protein Homology CDS 4150182 4154099 . + 0 ID=cds3770;Parent=gene3835;Dbxref=Genbank:WP_002210167.1;Name=WP_002210167.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210167.1;transl_table=11 NC_014029.1 RefSeq gene 4154102 4154458 . + . ID=gene3836;Name=YPZ3_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19215;old_locus_tag=YPZ3_3241 NC_014029.1 Protein Homology CDS 4154102 4154458 . + 0 ID=cds3771;Parent=gene3836;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11 NC_014029.1 RefSeq gene 4154576 4155103 . - . ID=gene3837;Name=YPZ3_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19220;old_locus_tag=YPZ3_3242 NC_014029.1 Protein Homology CDS 4154576 4155103 . - 0 ID=cds3772;Parent=gene3837;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11 NC_014029.1 RefSeq gene 4155303 4156316 . - . ID=gene3838;Name=YPZ3_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19225;old_locus_tag=YPZ3_3243 NC_014029.1 Protein Homology CDS 4155303 4156316 . - 0 ID=cds3773;Parent=gene3838;Dbxref=Genbank:WP_002216946.1;Name=WP_002216946.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002216946.1;transl_table=11 NC_014029.1 RefSeq gene 4156487 4157869 . + . ID=gene3839;Name=YPZ3_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19230;old_locus_tag=YPZ3_3244 NC_014029.1 Protein Homology CDS 4156487 4157869 . + 0 ID=cds3774;Parent=gene3839;Dbxref=Genbank:WP_002210171.1;Name=WP_002210171.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002210171.1;transl_table=11 NC_014029.1 RefSeq gene 4157956 4158162 . + . ID=gene3840;Name=YPZ3_RS19235;gbkey=Gene;gene_biotype=other;locus_tag=YPZ3_RS19235 NC_014029.1 RefSeq repeat_region 4157972 4158140 . + . ID=id310;gbkey=repeat_region NC_014029.1 RefSeq gene 4158165 4158428 . - . ID=gene3841;Name=YPZ3_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19240 NC_014029.1 Protein Homology CDS 4158165 4158428 . - 0 ID=cds3775;Parent=gene3841;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11 NC_014029.1 RefSeq gene 4158817 4159287 . - . ID=gene3842;Name=YPZ3_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19245;old_locus_tag=YPZ3_3245 NC_014029.1 Protein Homology CDS 4158817 4159287 . - 0 ID=cds3776;Parent=gene3842;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11 NC_014029.1 RefSeq gene 4159751 4160689 . + . ID=gene3843;Name=YPZ3_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19250;old_locus_tag=YPZ3_3246 NC_014029.1 Protein Homology CDS 4159751 4160689 . + 0 ID=cds3777;Parent=gene3843;Dbxref=Genbank:WP_002210174.1;Name=WP_002210174.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NC_014029.1 RefSeq gene 4161123 4161398 . - . ID=gene3844;Name=YPZ3_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19255 NC_014029.1 Protein Homology CDS 4161123 4161398 . - 0 ID=cds3778;Parent=gene3844;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11 NC_014029.1 RefSeq gene 4161582 4161929 . + . ID=gene3845;Name=YPZ3_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19260;old_locus_tag=YPZ3_3247 NC_014029.1 Protein Homology CDS 4161582 4161929 . + 0 ID=cds3779;Parent=gene3845;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NC_014029.1 RefSeq gene 4162026 4162997 . - . ID=gene3846;Name=YPZ3_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19265;old_locus_tag=YPZ3_3248 NC_014029.1 Protein Homology CDS 4162026 4162997 . - 0 ID=cds3780;Parent=gene3846;Dbxref=Genbank:WP_002210177.1;Name=WP_002210177.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_002210177.1;transl_table=11 NC_014029.1 RefSeq gene 4163257 4163568 . + . ID=gene3847;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YPZ3_RS19270;old_locus_tag=YPZ3_3249 NC_014029.1 Protein Homology CDS 4163257 4163568 . + 0 ID=cds3781;Parent=gene3847;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NC_014029.1 RefSeq gene 4163588 4163845 . + . ID=gene3848;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YPZ3_RS19275 NC_014029.1 Protein Homology CDS 4163588 4163845 . + 0 ID=cds3782;Parent=gene3848;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NC_014029.1 RefSeq gene 4163933 4164919 . + . ID=gene3849;Name=YPZ3_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19280;old_locus_tag=YPZ3_3250 NC_014029.1 Protein Homology CDS 4163933 4164919 . + 0 ID=cds3783;Parent=gene3849;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11 NC_014029.1 RefSeq gene 4164920 4166092 . + . ID=gene3850;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=YPZ3_RS19285;old_locus_tag=YPZ3_3251 NC_014029.1 Protein Homology CDS 4164920 4166092 . + 0 ID=cds3784;Parent=gene3850;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11 NC_014029.1 RefSeq gene 4166187 4167254 . - . ID=gene3851;Name=YPZ3_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19290;old_locus_tag=YPZ3_3252 NC_014029.1 Protein Homology CDS 4166187 4167254 . - 0 ID=cds3785;Parent=gene3851;Dbxref=Genbank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002210182.1;transl_table=11 NC_014029.1 RefSeq gene 4167251 4167913 . - . ID=gene3852;Name=YPZ3_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19295;old_locus_tag=YPZ3_3253 NC_014029.1 Protein Homology CDS 4167251 4167913 . - 0 ID=cds3786;Parent=gene3852;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11 NC_014029.1 RefSeq gene 4167919 4169367 . - . ID=gene3853;Name=YPZ3_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19300;old_locus_tag=YPZ3_3254 NC_014029.1 Protein Homology CDS 4167919 4169367 . - 0 ID=cds3787;Parent=gene3853;Dbxref=Genbank:WP_002217314.1;Name=WP_002217314.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002217314.1;transl_table=11 NC_014029.1 RefSeq gene 4169625 4170102 . + . ID=gene3854;Name=greA;gbkey=Gene;gene=greA;gene_biotype=pseudogene;locus_tag=YPZ3_RS19305;pseudo=true NC_014029.1 Protein Homology CDS 4169625 4170102 . + 0 ID=cds3788;Parent=gene3854;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 4170230 4170523 . - . ID=gene3855;Name=YPZ3_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19310 NC_014029.1 Protein Homology CDS 4170230 4170523 . - 0 ID=cds3789;Parent=gene3855;Dbxref=Genbank:WP_002210185.1;Name=WP_002210185.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002210185.1;transl_table=11 NC_014029.1 RefSeq gene 4170670 4171299 . + . ID=gene3856;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS19315;old_locus_tag=YPZ3_3256 NC_014029.1 Protein Homology CDS 4170670 4171299 . + 0 ID=cds3790;Parent=gene3856;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11 NC_014029.1 RefSeq gene 4171356 4173290 . + . ID=gene3857;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=YPZ3_RS19320;old_locus_tag=YPZ3_3257 NC_014029.1 Protein Homology CDS 4171356 4173290 . + 0 ID=cds3791;Parent=gene3857;Dbxref=Genbank:WP_002228195.1;Name=WP_002228195.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_002228195.1;transl_table=11 NC_014029.1 RefSeq gene 4173410 4174243 . + . ID=gene3858;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YPZ3_RS19325;old_locus_tag=YPZ3_3258 NC_014029.1 Protein Homology CDS 4173410 4174243 . + 0 ID=cds3792;Parent=gene3858;Dbxref=Genbank:WP_002210188.1;Name=WP_002210188.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_002210188.1;transl_table=11 NC_014029.1 RefSeq gene 4174253 4175593 . + . ID=gene3859;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YPZ3_RS19330;old_locus_tag=YPZ3_3259 NC_014029.1 Protein Homology CDS 4174253 4175593 . + 0 ID=cds3793;Parent=gene3859;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NC_014029.1 RefSeq gene 4175816 4176151 . + . ID=gene3860;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YPZ3_RS19335 NC_014029.1 Protein Homology CDS 4175816 4176151 . + 0 ID=cds3794;Parent=gene3860;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NC_014029.1 RefSeq gene 4176244 4176330 . + . ID=gene3861;Name=YPZ3_RS19340;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19340;old_locus_tag=YPZ3_t50 NC_014029.1 tRNAscan-SE tRNA 4176244 4176330 . + . ID=rna59;Parent=gene3861;anticodon=(pos:4176278..4176280);gbkey=tRNA;product=tRNA-Leu NC_014029.1 tRNAscan-SE exon 4176244 4176330 . + . ID=id311;Parent=rna59;anticodon=(pos:4176278..4176280);gbkey=tRNA;product=tRNA-Leu NC_014029.1 RefSeq gene 4176391 4176467 . + . ID=gene3862;Name=YPZ3_RS19345;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19345;old_locus_tag=YPZ3_t51 NC_014029.1 tRNAscan-SE tRNA 4176391 4176467 . + . ID=rna60;Parent=gene3862;anticodon=(pos:4176425..4176427);gbkey=tRNA;product=tRNA-Met NC_014029.1 tRNAscan-SE exon 4176391 4176467 . + . ID=id312;Parent=rna60;anticodon=(pos:4176425..4176427);gbkey=tRNA;product=tRNA-Met NC_014029.1 RefSeq gene 4176683 4177135 . + . ID=gene3863;Name=YPZ3_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19350;old_locus_tag=YPZ3_3260 NC_014029.1 Protein Homology CDS 4176683 4177135 . + 0 ID=cds3795;Parent=gene3863;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11 NC_014029.1 RefSeq gene 4177157 4178644 . + . ID=gene3864;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YPZ3_RS19355;old_locus_tag=YPZ3_3261 NC_014029.1 Protein Homology CDS 4177157 4178644 . + 0 ID=cds3796;Parent=gene3864;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NC_014029.1 RefSeq gene 4178669 4181347 . + . ID=gene3865;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19360;old_locus_tag=YPZ3_3262 NC_014029.1 Protein Homology CDS 4178669 4181347 . + 0 ID=cds3797;Parent=gene3865;Dbxref=Genbank:WP_002223151.1;Name=WP_002223151.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_002223151.1;transl_table=11 NC_014029.1 RefSeq gene 4181413 4181823 . + . ID=gene3866;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YPZ3_RS19365;old_locus_tag=YPZ3_3263 NC_014029.1 Protein Homology CDS 4181413 4181823 . + 0 ID=cds3798;Parent=gene3866;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11 NC_014029.1 RefSeq gene 4181823 4182797 . + . ID=gene3867;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19370;old_locus_tag=YPZ3_3264 NC_014029.1 Protein Homology CDS 4181823 4182797 . + 0 ID=cds3799;Parent=gene3867;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11 NC_014029.1 RefSeq gene 4182919 4183188 . + . ID=gene3868;Name=YPZ3_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19375;old_locus_tag=YPZ3_p2 NC_014029.1 Protein Homology CDS 4182919 4183188 . + 0 ID=cds3800;Parent=gene3868;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4183219 4184662 . + . ID=id313;gbkey=repeat_region NC_014029.1 RefSeq gene 4183275 4183790 . + . ID=gene3869;Name=YPZ3_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19380;old_locus_tag=YPZ3_3265 NC_014029.1 Protein Homology CDS 4183275 4183790 . + 0 ID=cds3801;Parent=gene3869;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_014029.1 RefSeq gene 4183844 4184442 . + . ID=gene3870;Name=YPZ3_RS19385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS19385;pseudo=true NC_014029.1 Protein Homology CDS 4183844 4184442 . + 0 ID=cds3802;Parent=gene3870;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 4184633 4185745 . - . ID=gene3871;Name=YPZ3_RS19390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS19390;partial=true;pseudo=true;start_range=.,4184633 NC_014029.1 Protein Homology CDS 4184633 4185745 . - 0 ID=cds3803;Parent=gene3871;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type VI secretion protein;pseudo=true;start_range=.,4184633;transl_table=11 NC_014029.1 RefSeq gene 4185745 4186185 . - . ID=gene3872;Name=YPZ3_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19395;old_locus_tag=YPZ3_3267 NC_014029.1 Protein Homology CDS 4185745 4186185 . - 0 ID=cds3804;Parent=gene3872;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11 NC_014029.1 RefSeq gene 4186192 4187673 . - . ID=gene3873;Name=YPZ3_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19400;old_locus_tag=YPZ3_3268 NC_014029.1 Protein Homology CDS 4186192 4187673 . - 0 ID=cds3805;Parent=gene3873;Dbxref=Genbank:WP_002212099.1;Name=WP_002212099.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212099.1;transl_table=11 NC_014029.1 RefSeq gene 4187741 4188238 . - . ID=gene3874;Name=YPZ3_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19405;old_locus_tag=YPZ3_3269 NC_014029.1 Protein Homology CDS 4187741 4188238 . - 0 ID=cds3806;Parent=gene3874;Dbxref=Genbank:WP_002212098.1;Name=WP_002212098.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212098.1;transl_table=11 NC_014029.1 RefSeq gene 4188762 4189280 . + . ID=gene3875;Name=YPZ3_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19410;old_locus_tag=YPZ3_3270 NC_014029.1 Protein Homology CDS 4188762 4189280 . + 0 ID=cds3807;Parent=gene3875;Dbxref=Genbank:WP_002212097.1;Name=WP_002212097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212097.1;transl_table=11 NC_014029.1 RefSeq gene 4189432 4189710 . - . ID=gene3876;Name=YPZ3_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19415 NC_014029.1 Protein Homology CDS 4189432 4189710 . - 0 ID=cds3808;Parent=gene3876;Dbxref=Genbank:WP_002212095.1;Name=WP_002212095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212095.1;transl_table=11 NC_014029.1 RefSeq gene 4190181 4191092 . - . ID=gene3877;Name=YPZ3_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19420;old_locus_tag=YPZ3_3271 NC_014029.1 Protein Homology CDS 4190181 4191092 . - 0 ID=cds3809;Parent=gene3877;Dbxref=Genbank:WP_002212093.1;Name=WP_002212093.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_002212093.1;transl_table=11 NC_014029.1 RefSeq gene 4191333 4192604 . - . ID=gene3878;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19425;old_locus_tag=YPZ3_3272 NC_014029.1 Protein Homology CDS 4191333 4192604 . - 0 ID=cds3810;Parent=gene3878;Dbxref=Genbank:WP_002212092.1;Name=WP_002212092.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NC_014029.1 RefSeq gene 4192675 4193784 . - . ID=gene3879;Name=YPZ3_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19430;old_locus_tag=YPZ3_3273 NC_014029.1 Protein Homology CDS 4192675 4193784 . - 0 ID=cds3811;Parent=gene3879;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NC_014029.1 RefSeq gene 4193788 4194024 . - . ID=gene3880;Name=YPZ3_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19435 NC_014029.1 Protein Homology CDS 4193788 4194024 . - 0 ID=cds3812;Parent=gene3880;Dbxref=Genbank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11 NC_014029.1 RefSeq gene 4194612 4195823 . + . ID=gene3881;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YPZ3_RS19440;old_locus_tag=YPZ3_3274 NC_014029.1 Protein Homology CDS 4194612 4195823 . + 0 ID=cds3813;Parent=gene3881;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11 NC_014029.1 RefSeq gene 4196010 4197587 . + . ID=gene3882;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YPZ3_RS19445;old_locus_tag=YPZ3_3275 NC_014029.1 Protein Homology CDS 4196010 4197587 . + 0 ID=cds3814;Parent=gene3882;Dbxref=Genbank:WP_002212088.1;Name=WP_002212088.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_002212088.1;transl_table=11 NC_014029.1 RefSeq gene 4197601 4198491 . + . ID=gene3883;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YPZ3_RS19450;old_locus_tag=YPZ3_3276 NC_014029.1 Protein Homology CDS 4197601 4198491 . + 0 ID=cds3815;Parent=gene3883;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11 NC_014029.1 RefSeq gene 4198634 4199041 . - . ID=gene3884;Name=YPZ3_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19455;old_locus_tag=YPZ3_3277 NC_014029.1 Protein Homology CDS 4198634 4199041 . - 0 ID=cds3816;Parent=gene3884;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11 NC_014029.1 RefSeq gene 4199176 4200822 . - . ID=gene3885;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YPZ3_RS19460;old_locus_tag=YPZ3_3278 NC_014029.1 Protein Homology CDS 4199176 4200822 . - 0 ID=cds3817;Parent=gene3885;Dbxref=Genbank:WP_002212085.1;Name=WP_002212085.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NC_014029.1 RefSeq gene 4201192 4202577 . + . ID=gene3886;Name=YPZ3_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19465;old_locus_tag=YPZ3_3279 NC_014029.1 Protein Homology CDS 4201192 4202577 . + 0 ID=cds3818;Parent=gene3886;Dbxref=Genbank:WP_002212084.1;Name=WP_002212084.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_002212084.1;transl_table=11 NC_014029.1 RefSeq gene 4203335 4204834 . + . ID=gene3887;Name=YPZ3_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19475;old_locus_tag=YPZ3_3281 NC_014029.1 Protein Homology CDS 4203335 4204834 . + 0 ID=cds3819;Parent=gene3887;Dbxref=Genbank:WP_002228765.1;Name=WP_002228765.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002228765.1;transl_table=11 NC_014029.1 RefSeq gene 4204904 4209811 . + . ID=gene3888;Name=YPZ3_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19480;old_locus_tag=YPZ3_3282 NC_014029.1 Protein Homology CDS 4204904 4209811 . + 0 ID=cds3820;Parent=gene3888;Dbxref=Genbank:WP_002212081.1;Name=WP_002212081.1;gbkey=CDS;product=hemolysin;protein_id=WP_002212081.1;transl_table=11 NC_014029.1 RefSeq gene 4209907 4213602 . - . ID=gene3889;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YPZ3_RS19485;old_locus_tag=YPZ3_3283 NC_014029.1 Protein Homology CDS 4209907 4213602 . - 0 ID=cds3821;Parent=gene3889;Dbxref=Genbank:WP_002212080.1;Name=WP_002212080.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_002212080.1;transl_table=11 NC_014029.1 RefSeq gene 4213817 4214164 . + . ID=gene3890;Name=YPZ3_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19490;old_locus_tag=YPZ3_3284 NC_014029.1 Protein Homology CDS 4213817 4214164 . + 0 ID=cds3822;Parent=gene3890;Dbxref=Genbank:WP_002228764.1;Name=WP_002228764.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002228764.1;transl_table=11 NC_014029.1 RefSeq gene 4214149 4214661 . + . ID=gene3891;Name=YPZ3_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19495;old_locus_tag=YPZ3_3285 NC_014029.1 Protein Homology CDS 4214149 4214661 . + 0 ID=cds3823;Parent=gene3891;Dbxref=Genbank:WP_002355282.1;Name=WP_002355282.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002355282.1;transl_table=11 NC_014029.1 RefSeq gene 4214781 4216508 . - . ID=gene3892;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YPZ3_RS19500;old_locus_tag=YPZ3_3286 NC_014029.1 Protein Homology CDS 4214781 4216508 . - 0 ID=cds3824;Parent=gene3892;Dbxref=Genbank:WP_002212079.1;Name=WP_002212079.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_002212079.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4216546 4216720 . + . ID=id314;gbkey=repeat_region NC_014029.1 RefSeq gene 4216764 4218071 . - . ID=gene3893;Name=YPZ3_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19505;old_locus_tag=YPZ3_3287 NC_014029.1 Protein Homology CDS 4216764 4218071 . - 0 ID=cds3825;Parent=gene3893;Dbxref=Genbank:WP_002212078.1;Name=WP_002212078.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_002212078.1;transl_table=11 NC_014029.1 RefSeq gene 4218118 4219716 . - . ID=gene3894;Name=YPZ3_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19510;old_locus_tag=YPZ3_3288 NC_014029.1 Protein Homology CDS 4218118 4219716 . - 0 ID=cds3826;Parent=gene3894;Dbxref=Genbank:WP_002212077.1;Name=WP_002212077.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_002212077.1;transl_table=11 NC_014029.1 RefSeq gene 4220137 4221066 . - . ID=gene3895;Name=YPZ3_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19515;old_locus_tag=YPZ3_3289 NC_014029.1 Protein Homology CDS 4220137 4221066 . - 0 ID=cds3827;Parent=gene3895;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11 NC_014029.1 RefSeq gene 4221134 4221406 . + . ID=gene3896;Name=YPZ3_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19520 NC_014029.1 Protein Homology CDS 4221134 4221406 . + 0 ID=cds3828;Parent=gene3896;Dbxref=Genbank:WP_002430138.1;Name=WP_002430138.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430138.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4221796 4221929 . + . ID=id315;gbkey=repeat_region NC_014029.1 RefSeq gene 4221806 4221921 . - . ID=gene3897;Name=YPZ3_RS19525;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS19525;old_locus_tag=YPZ3_r11 NC_014029.1 cmsearch rRNA 4221806 4221921 . - . ID=rna61;Parent=gene3897;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 cmsearch exon 4221806 4221921 . - . ID=id316;Parent=rna61;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 RefSeq gene 4221962 4222037 . - . ID=gene3898;Name=YPZ3_RS19530;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19530;old_locus_tag=YPZ3_t52 NC_014029.1 tRNAscan-SE tRNA 4221962 4222037 . - . ID=rna62;Parent=gene3898;anticodon=(pos:complement(4222002..4222004));gbkey=tRNA;product=tRNA-Thr NC_014029.1 tRNAscan-SE exon 4221962 4222037 . - . ID=id317;Parent=rna62;anticodon=(pos:complement(4222002..4222004));gbkey=tRNA;product=tRNA-Thr NC_014029.1 RefSeq repeat_region 4222046 4227458 . + . ID=id318;gbkey=repeat_region NC_014029.1 RefSeq gene 4222053 4222168 . - . ID=gene3899;Name=YPZ3_RS19535;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS19535;old_locus_tag=YPZ3_r12 NC_014029.1 cmsearch rRNA 4222053 4222168 . - . ID=rna63;Parent=gene3899;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 cmsearch exon 4222053 4222168 . - . ID=id319;Parent=rna63;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 RefSeq gene 4222260 4225193 . - . ID=gene3900;Name=YPZ3_RS19540;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS19540;old_locus_tag=YPZ3_r13 NC_014029.1 RefSeq rRNA 4222260 4225193 . - . ID=rna64;Parent=gene3900;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq exon 4222260 4225193 . - . ID=id320;Parent=rna64;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq gene 4225403 4225478 . - . ID=gene3901;Name=YPZ3_RS19545;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19545;old_locus_tag=YPZ3_t53 NC_014029.1 tRNAscan-SE tRNA 4225403 4225478 . - . ID=rna65;Parent=gene3901;anticodon=(pos:complement(4225443..4225445));gbkey=tRNA;product=tRNA-Ala NC_014029.1 tRNAscan-SE exon 4225403 4225478 . - . ID=id321;Parent=rna65;anticodon=(pos:complement(4225443..4225445));gbkey=tRNA;product=tRNA-Ala NC_014029.1 RefSeq gene 4225530 4225606 . - . ID=gene3902;Name=YPZ3_RS19550;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19550;old_locus_tag=YPZ3_t54 NC_014029.1 tRNAscan-SE tRNA 4225530 4225606 . - . ID=rna66;Parent=gene3902;anticodon=(pos:complement(4225570..4225572));gbkey=tRNA;product=tRNA-Ile NC_014029.1 tRNAscan-SE exon 4225530 4225606 . - . ID=id322;Parent=rna66;anticodon=(pos:complement(4225570..4225572));gbkey=tRNA;product=tRNA-Ile NC_014029.1 RefSeq gene 4225706 4227254 . - . ID=gene3903;Name=YPZ3_RS19555;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS19555;old_locus_tag=YPZ3_r14 NC_014029.1 RefSeq rRNA 4225706 4227254 . - . ID=rna67;Parent=gene3903;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq exon 4225706 4227254 . - . ID=id323;Parent=rna67;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq gene 4227522 4227752 . - . ID=gene3904;Name=YPZ3_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22170 NC_014029.1 Protein Homology CDS 4227522 4227752 . - 0 ID=cds3829;Parent=gene3904;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11 NC_014029.1 RefSeq gene 4227910 4229499 . + . ID=gene3905;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YPZ3_RS19565;old_locus_tag=YPZ3_3290 NC_014029.1 Protein Homology CDS 4227910 4229499 . + 0 ID=cds3830;Parent=gene3905;Dbxref=Genbank:WP_002210692.1;Name=WP_002210692.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_002210692.1;transl_table=11 NC_014029.1 RefSeq gene 4229559 4230845 . + . ID=gene3906;Name=YPZ3_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19570;old_locus_tag=YPZ3_3291 NC_014029.1 Protein Homology CDS 4229559 4230845 . + 0 ID=cds3831;Parent=gene3906;Dbxref=Genbank:WP_002210691.1;Name=WP_002210691.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_002210691.1;transl_table=11 NC_014029.1 RefSeq gene 4230993 4231646 . - . ID=gene3907;Name=YPZ3_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19575;old_locus_tag=YPZ3_3292 NC_014029.1 Protein Homology CDS 4230993 4231646 . - 0 ID=cds3832;Parent=gene3907;Dbxref=Genbank:WP_002355296.1;Name=WP_002355296.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355296.1;transl_table=11 NC_014029.1 RefSeq gene 4231696 4231971 . - . ID=gene3908;Name=YPZ3_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19580 NC_014029.1 Protein Homology CDS 4231696 4231971 . - 0 ID=cds3833;Parent=gene3908;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11 NC_014029.1 RefSeq gene 4232160 4232750 . - . ID=gene3909;Name=YPZ3_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19585;old_locus_tag=YPZ3_3293 NC_014029.1 Protein Homology CDS 4232160 4232750 . - 0 ID=cds3834;Parent=gene3909;Dbxref=Genbank:WP_002210688.1;Name=WP_002210688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210688.1;transl_table=11 NC_014029.1 RefSeq gene 4232796 4233502 . - . ID=gene3910;Name=YPZ3_RS19590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS19590;pseudo=true NC_014029.1 Protein Homology CDS 4232796 4233502 . - 0 ID=cds3835;Parent=gene3910;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;exception=annotated by transcript or proteomic data;gbkey=CDS;product=endonuclease V;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 4233568 4234635 . - . ID=gene3911;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YPZ3_RS19595;old_locus_tag=YPZ3_3295 NC_014029.1 Protein Homology CDS 4233568 4234635 . - 0 ID=cds3836;Parent=gene3911;Dbxref=Genbank:WP_002210686.1;Name=WP_002210686.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_002210686.1;transl_table=11 NC_014029.1 RefSeq gene 4234754 4235497 . - . ID=gene3912;Name=YPZ3_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19600;old_locus_tag=YPZ3_3296 NC_014029.1 Protein Homology CDS 4234754 4235497 . - 0 ID=cds3837;Parent=gene3912;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11 NC_014029.1 RefSeq gene 4235632 4236414 . - . ID=gene3913;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YPZ3_RS19605;old_locus_tag=YPZ3_3297 NC_014029.1 Protein Homology CDS 4235632 4236414 . - 0 ID=cds3838;Parent=gene3913;Dbxref=Genbank:WP_002210684.1;Name=WP_002210684.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_002210684.1;transl_table=11 NC_014029.1 RefSeq gene 4236511 4237020 . + . ID=gene3914;Name=YPZ3_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19610;old_locus_tag=YPZ3_3298 NC_014029.1 Protein Homology CDS 4236511 4237020 . + 0 ID=cds3839;Parent=gene3914;Dbxref=Genbank:WP_002210683.1;Name=WP_002210683.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_002210683.1;transl_table=11 NC_014029.1 RefSeq gene 4237143 4237403 . + . ID=gene3915;Name=YPZ3_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19615 NC_014029.1 Protein Homology CDS 4237143 4237403 . + 0 ID=cds3840;Parent=gene3915;Dbxref=Genbank:WP_002228187.1;Name=WP_002228187.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228187.1;transl_table=11 NC_014029.1 RefSeq gene 4237396 4239441 . + . ID=gene3916;Name=YPZ3_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19620;old_locus_tag=YPZ3_3299 NC_014029.1 Protein Homology CDS 4237396 4239441 . + 0 ID=cds3841;Parent=gene3916;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11 NC_014029.1 RefSeq gene 4239428 4240102 . + . ID=gene3917;Name=YPZ3_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19625;old_locus_tag=YPZ3_3300 NC_014029.1 Protein Homology CDS 4239428 4240102 . + 0 ID=cds3842;Parent=gene3917;Dbxref=Genbank:WP_002210681.1;Name=WP_002210681.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_002210681.1;transl_table=11 NC_014029.1 RefSeq gene 4240092 4240889 . + . ID=gene3918;Name=YPZ3_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19630;old_locus_tag=YPZ3_3301 NC_014029.1 Protein Homology CDS 4240092 4240889 . + 0 ID=cds3843;Parent=gene3918;Dbxref=Genbank:WP_002210680.1;Name=WP_002210680.1;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=WP_002210680.1;transl_table=11 NC_014029.1 RefSeq gene 4240886 4241101 . + . ID=gene3919;Name=YPZ3_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19635 NC_014029.1 Protein Homology CDS 4240886 4241101 . + 0 ID=cds3844;Parent=gene3919;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11 NC_014029.1 RefSeq gene 4241103 4241918 . + . ID=gene3920;Name=YPZ3_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19640;old_locus_tag=YPZ3_3302 NC_014029.1 Protein Homology CDS 4241103 4241918 . + 0 ID=cds3845;Parent=gene3920;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NC_014029.1 RefSeq gene 4241911 4243041 . + . ID=gene3921;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YPZ3_RS19645;old_locus_tag=YPZ3_3303 NC_014029.1 Protein Homology CDS 4241911 4243041 . + 0 ID=cds3846;Parent=gene3921;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11 NC_014029.1 RefSeq gene 4243084 4243197 . - . ID=gene3922;Name=YPZ3_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19650 NC_014029.1 Protein Homology CDS 4243084 4243197 . - 0 ID=cds3847;Parent=gene3922;Dbxref=Genbank:WP_002224232.1;Name=WP_002224232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224232.1;transl_table=11 NC_014029.1 RefSeq gene 4243316 4243483 . + . ID=gene3923;Name=YPZ3_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19655 NC_014029.1 Protein Homology CDS 4243316 4243483 . + 0 ID=cds3848;Parent=gene3923;Dbxref=Genbank:WP_002217271.1;Name=WP_002217271.1;gbkey=CDS;product=invasin;protein_id=WP_002217271.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4243321 4244042 . + . ID=id324;gbkey=repeat_region NC_014029.1 RefSeq gene 4243473 4243931 . + . ID=gene3924;Name=YPZ3_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19660;old_locus_tag=YPZ3_3304 NC_014029.1 Protein Homology CDS 4243473 4243931 . + 0 ID=cds3849;Parent=gene3924;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 4244058 4248278 . - . ID=gene3925;Name=YPZ3_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19665;old_locus_tag=YPZ3_3305 NC_014029.1 Protein Homology CDS 4244058 4248278 . - 0 ID=cds3850;Parent=gene3925;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NC_014029.1 RefSeq gene 4248407 4252435 . - . ID=gene3926;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19670;old_locus_tag=YPZ3_3306 NC_014029.1 Protein Homology CDS 4248407 4252435 . - 0 ID=cds3851;Parent=gene3926;Dbxref=Genbank:WP_002210676.1;Name=WP_002210676.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002210676.1;transl_table=11 NC_014029.1 RefSeq gene 4252778 4253146 . - . ID=gene3927;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YPZ3_RS19675;old_locus_tag=YPZ3_3307 NC_014029.1 Protein Homology CDS 4252778 4253146 . - 0 ID=cds3852;Parent=gene3927;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NC_014029.1 RefSeq gene 4253213 4253710 . - . ID=gene3928;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YPZ3_RS19680;old_locus_tag=YPZ3_3308 NC_014029.1 Protein Homology CDS 4253213 4253710 . - 0 ID=cds3853;Parent=gene3928;Dbxref=Genbank:WP_002210674.1;Name=WP_002210674.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NC_014029.1 RefSeq gene 4254075 4254779 . - . ID=gene3929;Name=YPZ3_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19685;old_locus_tag=YPZ3_3309 NC_014029.1 Protein Homology CDS 4254075 4254779 . - 0 ID=cds3854;Parent=gene3929;Dbxref=Genbank:WP_002210673.1;Name=WP_002210673.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NC_014029.1 RefSeq gene 4254783 4255211 . - . ID=gene3930;Name=YPZ3_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19690;old_locus_tag=YPZ3_3310 NC_014029.1 Protein Homology CDS 4254783 4255211 . - 0 ID=cds3855;Parent=gene3930;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NC_014029.1 RefSeq gene 4255402 4255947 . - . ID=gene3931;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YPZ3_RS19695;old_locus_tag=YPZ3_3311 NC_014029.1 Protein Homology CDS 4255402 4255947 . - 0 ID=cds3856;Parent=gene3931;Dbxref=Genbank:WP_002210671.1;Name=WP_002210671.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NC_014029.1 RefSeq gene 4255949 4256332 . - . ID=gene3932;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=YPZ3_RS19700;old_locus_tag=YPZ3_3312 NC_014029.1 Protein Homology CDS 4255949 4256332 . - 0 ID=cds3857;Parent=gene3932;Dbxref=Genbank:WP_002210670.1;Name=WP_002210670.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NC_014029.1 RefSeq gene 4256583 4257767 . - . ID=gene3933;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPZ3_RS19705;old_locus_tag=YPZ3_3313 NC_014029.1 Protein Homology CDS 4256583 4257767 . - 0 ID=cds3858;Parent=gene3933;Dbxref=Genbank:WP_002210669.1;Name=WP_002210669.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NC_014029.1 RefSeq gene 4257876 4257951 . - . ID=gene3934;Name=YPZ3_RS19710;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19710;old_locus_tag=YPZ3_t55 NC_014029.1 tRNAscan-SE tRNA 4257876 4257951 . - . ID=rna68;Parent=gene3934;anticodon=(pos:complement(4257916..4257918));gbkey=tRNA;product=tRNA-Thr NC_014029.1 tRNAscan-SE exon 4257876 4257951 . - . ID=id325;Parent=rna68;anticodon=(pos:complement(4257916..4257918));gbkey=tRNA;product=tRNA-Thr NC_014029.1 RefSeq gene 4257958 4258032 . - . ID=gene3935;Name=YPZ3_RS19715;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19715;old_locus_tag=YPZ3_t56 NC_014029.1 tRNAscan-SE tRNA 4257958 4258032 . - . ID=rna69;Parent=gene3935;anticodon=(pos:complement(4257997..4257999));gbkey=tRNA;product=tRNA-Gly NC_014029.1 tRNAscan-SE exon 4257958 4258032 . - . ID=id326;Parent=rna69;anticodon=(pos:complement(4257997..4257999));gbkey=tRNA;product=tRNA-Gly NC_014029.1 RefSeq gene 4258182 4258266 . - . ID=gene3936;Name=YPZ3_RS19720;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19720;old_locus_tag=YPZ3_t57 NC_014029.1 tRNAscan-SE tRNA 4258182 4258266 . - . ID=rna70;Parent=gene3936;anticodon=(pos:complement(4258230..4258232));gbkey=tRNA;product=tRNA-Tyr NC_014029.1 tRNAscan-SE exon 4258182 4258266 . - . ID=id327;Parent=rna70;anticodon=(pos:complement(4258230..4258232));gbkey=tRNA;product=tRNA-Tyr NC_014029.1 RefSeq gene 4258285 4258360 . - . ID=gene3937;Name=YPZ3_RS19725;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19725;old_locus_tag=YPZ3_t58 NC_014029.1 tRNAscan-SE tRNA 4258285 4258360 . - . ID=rna71;Parent=gene3937;anticodon=(pos:complement(4258325..4258327));gbkey=tRNA;product=tRNA-Thr NC_014029.1 tRNAscan-SE exon 4258285 4258360 . - . ID=id328;Parent=rna71;anticodon=(pos:complement(4258325..4258327));gbkey=tRNA;product=tRNA-Thr NC_014029.1 RefSeq repeat_region 4258754 4260714 . + . ID=id329;gbkey=repeat_region NC_014029.1 RefSeq gene 4258824 4259603 . - . ID=gene3938;Name=YPZ3_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19730;old_locus_tag=YPZ3_3314 NC_014029.1 Protein Homology CDS 4258824 4259603 . - 0 ID=cds3859;Parent=gene3938;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 4259603 4260625 . - . ID=gene3939;Name=YPZ3_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19735;old_locus_tag=YPZ3_3315 NC_014029.1 Protein Homology CDS 4259603 4260625 . - 0 ID=cds3860;Parent=gene3939;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 4260715 4261266 . + . ID=gene3940;Name=YPZ3_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19740;old_locus_tag=YPZ3_3316 NC_014029.1 Protein Homology CDS 4260715 4261266 . + 0 ID=cds3861;Parent=gene3940;Dbxref=Genbank:WP_002217850.1;Name=WP_002217850.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002217850.1;transl_table=11 NC_014029.1 RefSeq gene 4261477 4262427 . + . ID=gene3941;Name=YPZ3_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19745;old_locus_tag=YPZ3_3317 NC_014029.1 Protein Homology CDS 4261477 4262427 . + 0 ID=cds3862;Parent=gene3941;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NC_014029.1 RefSeq gene 4262462 4263421 . - . ID=gene3942;Name=YPZ3_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19750;old_locus_tag=YPZ3_3318 NC_014029.1 Protein Homology CDS 4262462 4263421 . - 0 ID=cds3863;Parent=gene3942;Dbxref=Genbank:WP_002212289.1;Name=WP_002212289.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_002212289.1;transl_table=11 NC_014029.1 RefSeq gene 4263418 4264455 . - . ID=gene3943;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19755;old_locus_tag=YPZ3_3319 NC_014029.1 Protein Homology CDS 4263418 4264455 . - 0 ID=cds3864;Parent=gene3943;Dbxref=Genbank:WP_002212288.1;Name=WP_002212288.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_002212288.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4264843 4270579 . + . ID=id330;gbkey=repeat_region NC_014029.1 RefSeq gene 4264919 4265034 . - . ID=gene3944;Name=YPZ3_RS19760;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS19760;old_locus_tag=YPZ3_r15 NC_014029.1 cmsearch rRNA 4264919 4265034 . - . ID=rna72;Parent=gene3944;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 cmsearch exon 4264919 4265034 . - . ID=id331;Parent=rna72;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 RefSeq gene 4265126 4268059 . - . ID=gene3945;Name=YPZ3_RS19765;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS19765;old_locus_tag=YPZ3_r16 NC_014029.1 RefSeq rRNA 4265126 4268059 . - . ID=rna73;Parent=gene3945;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq exon 4265126 4268059 . - . ID=id332;Parent=rna73;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq gene 4268269 4268344 . - . ID=gene3946;Name=YPZ3_RS19770;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19770;old_locus_tag=YPZ3_t59 NC_014029.1 tRNAscan-SE tRNA 4268269 4268344 . - . ID=rna74;Parent=gene3946;anticodon=(pos:complement(4268309..4268311));gbkey=tRNA;product=tRNA-Ala NC_014029.1 tRNAscan-SE exon 4268269 4268344 . - . ID=id333;Parent=rna74;anticodon=(pos:complement(4268309..4268311));gbkey=tRNA;product=tRNA-Ala NC_014029.1 RefSeq gene 4268396 4268472 . - . ID=gene3947;Name=YPZ3_RS19775;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS19775;old_locus_tag=YPZ3_t60 NC_014029.1 tRNAscan-SE tRNA 4268396 4268472 . - . ID=rna75;Parent=gene3947;anticodon=(pos:complement(4268436..4268438));gbkey=tRNA;product=tRNA-Ile NC_014029.1 tRNAscan-SE exon 4268396 4268472 . - . ID=id334;Parent=rna75;anticodon=(pos:complement(4268436..4268438));gbkey=tRNA;product=tRNA-Ile NC_014029.1 RefSeq gene 4268572 4270120 . - . ID=gene3948;Name=YPZ3_RS19780;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS19780;old_locus_tag=YPZ3_r17 NC_014029.1 RefSeq rRNA 4268572 4270120 . - . ID=rna76;Parent=gene3948;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq exon 4268572 4270120 . - . ID=id335;Parent=rna76;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq gene 4270605 4271138 . - . ID=gene3949;Name=YPZ3_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19790 NC_014029.1 Protein Homology CDS 4270605 4271138 . - 0 ID=cds3865;Parent=gene3949;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11 NC_014029.1 RefSeq gene 4271160 4272611 . - . ID=gene3950;Name=YPZ3_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19795;old_locus_tag=YPZ3_3320 NC_014029.1 Protein Homology CDS 4271160 4272611 . - 0 ID=cds3866;Parent=gene3950;Dbxref=Genbank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;product=potassium transporter;protein_id=WP_002211550.1;transl_table=11 NC_014029.1 RefSeq gene 4272651 4273127 . - . ID=gene3951;Name=YPZ3_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19800;old_locus_tag=YPZ3_3321 NC_014029.1 Protein Homology CDS 4272651 4273127 . - 0 ID=cds3867;Parent=gene3951;Dbxref=Genbank:WP_002211549.1;Name=WP_002211549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211549.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4273089 4273811 . + . ID=id336;gbkey=repeat_region NC_014029.1 RefSeq gene 4273200 4273658 . - . ID=gene3952;Name=YPZ3_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19805;old_locus_tag=YPZ3_3322 NC_014029.1 Protein Homology CDS 4273200 4273658 . - 0 ID=cds3868;Parent=gene3952;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 4273763 4273972 . - . ID=gene3953;Name=YPZ3_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19810 NC_014029.1 Protein Homology CDS 4273763 4273972 . - 0 ID=cds3869;Parent=gene3953;Dbxref=Genbank:WP_002211548.1;Name=WP_002211548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211548.1;transl_table=11 NC_014029.1 RefSeq gene 4273972 4275303 . - . ID=gene3954;Name=YPZ3_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19815;old_locus_tag=YPZ3_3323 NC_014029.1 Protein Homology CDS 4273972 4275303 . - 0 ID=cds3870;Parent=gene3954;Dbxref=Genbank:WP_002211547.1;Name=WP_002211547.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_002211547.1;transl_table=11 NC_014029.1 RefSeq gene 4275630 4277819 . + . ID=gene3955;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YPZ3_RS19820;old_locus_tag=YPZ3_3324 NC_014029.1 Protein Homology CDS 4275630 4277819 . + 0 ID=cds3871;Parent=gene3955;Dbxref=Genbank:WP_002211546.1;Name=WP_002211546.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002211546.1;transl_table=11 NC_014029.1 RefSeq gene 4277831 4278994 . + . ID=gene3956;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YPZ3_RS19825;old_locus_tag=YPZ3_3325 NC_014029.1 Protein Homology CDS 4277831 4278994 . + 0 ID=cds3872;Parent=gene3956;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11 NC_014029.1 RefSeq gene 4279154 4279855 . - . ID=gene3957;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=YPZ3_RS19830;old_locus_tag=YPZ3_3326 NC_014029.1 Protein Homology CDS 4279154 4279855 . - 0 ID=cds3873;Parent=gene3957;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11 NC_014029.1 RefSeq gene 4279910 4281406 . - . ID=gene3958;Name=YPZ3_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19835;old_locus_tag=YPZ3_3327 NC_014029.1 Protein Homology CDS 4279910 4281406 . - 0 ID=cds3874;Parent=gene3958;Dbxref=Genbank:WP_002215917.1;Name=WP_002215917.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002215917.1;transl_table=11 NC_014029.1 RefSeq gene 4281654 4282142 . + . ID=gene3959;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YPZ3_RS19840;old_locus_tag=YPZ3_3328 NC_014029.1 Protein Homology CDS 4281654 4282142 . + 0 ID=cds3875;Parent=gene3959;Dbxref=Genbank:WP_002211542.1;Name=WP_002211542.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_002211542.1;transl_table=11 NC_014029.1 RefSeq gene 4282252 4283274 . - . ID=gene3960;Name=YPZ3_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19845;old_locus_tag=YPZ3_3329 NC_014029.1 Protein Homology CDS 4282252 4283274 . - 0 ID=cds3876;Parent=gene3960;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11 NC_014029.1 RefSeq gene 4283289 4283624 . - . ID=gene3961;Name=YPZ3_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19850;old_locus_tag=YPZ3_3330 NC_014029.1 Protein Homology CDS 4283289 4283624 . - 0 ID=cds3877;Parent=gene3961;Dbxref=Genbank:WP_002211540.1;Name=WP_002211540.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211540.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4283595 4285552 . + . ID=id337;gbkey=repeat_region NC_014029.1 RefSeq gene 4283663 4284442 . - . ID=gene3962;Name=YPZ3_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19855;old_locus_tag=YPZ3_3331 NC_014029.1 Protein Homology CDS 4283663 4284442 . - 0 ID=cds3878;Parent=gene3962;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014029.1 RefSeq gene 4284442 4285464 . - . ID=gene3963;Name=YPZ3_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19860;old_locus_tag=YPZ3_3332 NC_014029.1 Protein Homology CDS 4284442 4285464 . - 0 ID=cds3879;Parent=gene3963;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014029.1 RefSeq gene 4285491 4286030 . - . ID=gene3964;Name=YPZ3_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19865;old_locus_tag=YPZ3_3333 NC_014029.1 Protein Homology CDS 4285491 4286030 . - 0 ID=cds3880;Parent=gene3964;Dbxref=Genbank:WP_002211539.1;Name=WP_002211539.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211539.1;transl_table=11 NC_014029.1 RefSeq gene 4286086 4286862 . - . ID=gene3965;Name=YPZ3_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19870;old_locus_tag=YPZ3_3334 NC_014029.1 Protein Homology CDS 4286086 4286862 . - 0 ID=cds3881;Parent=gene3965;Dbxref=Genbank:WP_002211538.1;Name=WP_002211538.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_002211538.1;transl_table=11 NC_014029.1 RefSeq gene 4286865 4287527 . - . ID=gene3966;Name=YPZ3_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19875;old_locus_tag=YPZ3_3335 NC_014029.1 Protein Homology CDS 4286865 4287527 . - 0 ID=cds3882;Parent=gene3966;Dbxref=Genbank:WP_002211537.1;Name=WP_002211537.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_002211537.1;transl_table=11 NC_014029.1 RefSeq gene 4287531 4287797 . - . ID=gene3967;Name=YPZ3_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19880 NC_014029.1 Protein Homology CDS 4287531 4287797 . - 0 ID=cds3883;Parent=gene3967;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11 NC_014029.1 RefSeq gene 4287977 4289608 . - . ID=gene3968;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=YPZ3_RS19885;old_locus_tag=YPZ3_3336 NC_014029.1 Protein Homology CDS 4287977 4289608 . - 0 ID=cds3884;Parent=gene3968;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11 NC_014029.1 RefSeq gene 4289608 4290258 . - . ID=gene3969;Name=YPZ3_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19890;old_locus_tag=YPZ3_3337 NC_014029.1 Protein Homology CDS 4289608 4290258 . - 0 ID=cds3885;Parent=gene3969;Dbxref=Genbank:WP_002215928.1;Name=WP_002215928.1;gbkey=CDS;product=sterol-binding protein;protein_id=WP_002215928.1;transl_table=11 NC_014029.1 RefSeq gene 4290272 4291027 . - . ID=gene3970;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YPZ3_RS19895;old_locus_tag=YPZ3_3338 NC_014029.1 Protein Homology CDS 4290272 4291027 . - 0 ID=cds3886;Parent=gene3970;Dbxref=Genbank:WP_002211533.1;Name=WP_002211533.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002211533.1;transl_table=11 NC_014029.1 RefSeq gene 4291119 4292624 . - . ID=gene3971;Name=YPZ3_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19900;old_locus_tag=YPZ3_3339 NC_014029.1 Protein Homology CDS 4291119 4292624 . - 0 ID=cds3887;Parent=gene3971;Dbxref=Genbank:WP_002211532.1;Name=WP_002211532.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_002211532.1;transl_table=11 NC_014029.1 RefSeq gene 4292832 4293362 . - . ID=gene3972;Name=YPZ3_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19905;old_locus_tag=YPZ3_3340 NC_014029.1 Protein Homology CDS 4292832 4293362 . - 0 ID=cds3888;Parent=gene3972;Dbxref=Genbank:WP_002211531.1;Name=WP_002211531.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002211531.1;transl_table=11 NC_014029.1 RefSeq gene 4293634 4295445 . - . ID=gene3973;Name=YPZ3_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19910;old_locus_tag=YPZ3_3341 NC_014029.1 Protein Homology CDS 4293634 4295445 . - 0 ID=cds3889;Parent=gene3973;Dbxref=Genbank:WP_002211530.1;Name=WP_002211530.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_002211530.1;transl_table=11 NC_014029.1 RefSeq gene 4295809 4296639 . - . ID=gene3974;Name=YPZ3_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19915;old_locus_tag=YPZ3_3342 NC_014029.1 Protein Homology CDS 4295809 4296639 . - 0 ID=cds3890;Parent=gene3974;Dbxref=Genbank:WP_002228183.1;Name=WP_002228183.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228183.1;transl_table=11 NC_014029.1 RefSeq gene 4296760 4297521 . - . ID=gene3975;Name=YPZ3_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19920;old_locus_tag=YPZ3_3343 NC_014029.1 Protein Homology CDS 4296760 4297521 . - 0 ID=cds3891;Parent=gene3975;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NC_014029.1 RefSeq gene 4297949 4298821 . + . ID=gene3976;Name=YPZ3_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19925;old_locus_tag=YPZ3_3344 NC_014029.1 Protein Homology CDS 4297949 4298821 . + 0 ID=cds3892;Parent=gene3976;Dbxref=Genbank:WP_002211527.1;Name=WP_002211527.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_002211527.1;transl_table=11 NC_014029.1 RefSeq gene 4298876 4301167 . - . ID=gene3977;Name=YPZ3_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19930;old_locus_tag=YPZ3_3345 NC_014029.1 Protein Homology CDS 4298876 4301167 . - 0 ID=cds3893;Parent=gene3977;Dbxref=Genbank:WP_002220853.1;Name=WP_002220853.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_002220853.1;transl_table=11 NC_014029.1 RefSeq gene 4301258 4302211 . + . ID=gene3978;Name=YPZ3_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19935;old_locus_tag=YPZ3_3346 NC_014029.1 Protein Homology CDS 4301258 4302211 . + 0 ID=cds3894;Parent=gene3978;Dbxref=Genbank:WP_002211525.1;Name=WP_002211525.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211525.1;transl_table=11 NC_014029.1 RefSeq gene 4302099 4302998 . - . ID=gene3979;Name=YPZ3_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19940 NC_014029.1 Protein Homology CDS 4302099 4302998 . - 0 ID=cds3895;Parent=gene3979;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11 NC_014029.1 RefSeq gene 4303380 4304306 . - . ID=gene3980;Name=YPZ3_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19945;old_locus_tag=YPZ3_3347 NC_014029.1 Protein Homology CDS 4303380 4304306 . - 0 ID=cds3896;Parent=gene3980;Dbxref=Genbank:WP_002215599.1;Name=WP_002215599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215599.1;transl_table=11 NC_014029.1 RefSeq gene 4304407 4305156 . - . ID=gene3981;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS19950;old_locus_tag=YPZ3_3348 NC_014029.1 Protein Homology CDS 4304407 4305156 . - 0 ID=cds3897;Parent=gene3981;Dbxref=Genbank:WP_002211524.1;Name=WP_002211524.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211524.1;transl_table=11 NC_014029.1 RefSeq gene 4305153 4306226 . - . ID=gene3982;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YPZ3_RS19955;old_locus_tag=YPZ3_3349 NC_014029.1 Protein Homology CDS 4305153 4306226 . - 0 ID=cds3898;Parent=gene3982;Dbxref=Genbank:WP_002211523.1;Name=WP_002211523.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_002211523.1;transl_table=11 NC_014029.1 RefSeq gene 4306233 4307078 . - . ID=gene3983;Name=YPZ3_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19960;old_locus_tag=YPZ3_3350 NC_014029.1 Protein Homology CDS 4306233 4307078 . - 0 ID=cds3899;Parent=gene3983;Dbxref=Genbank:WP_002211522.1;Name=WP_002211522.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211522.1;transl_table=11 NC_014029.1 RefSeq gene 4307075 4307962 . - . ID=gene3984;Name=YPZ3_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19965;old_locus_tag=YPZ3_3351 NC_014029.1 Protein Homology CDS 4307075 4307962 . - 0 ID=cds3900;Parent=gene3984;Dbxref=Genbank:WP_002211521.1;Name=WP_002211521.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211521.1;transl_table=11 NC_014029.1 RefSeq gene 4308260 4309579 . - . ID=gene3985;Name=YPZ3_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19970;old_locus_tag=YPZ3_3352 NC_014029.1 Protein Homology CDS 4308260 4309579 . - 0 ID=cds3901;Parent=gene3985;Dbxref=Genbank:WP_002211520.1;Name=WP_002211520.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_002211520.1;transl_table=11 NC_014029.1 RefSeq gene 4310134 4310625 . + . ID=gene3986;Name=YPZ3_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19975;old_locus_tag=YPZ3_3353 NC_014029.1 Protein Homology CDS 4310134 4310625 . + 0 ID=cds3902;Parent=gene3986;Dbxref=Genbank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228181.1;transl_table=11 NC_014029.1 RefSeq gene 4310892 4313225 . + . ID=gene3987;Name=YPZ3_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19980;old_locus_tag=YPZ3_3354 NC_014029.1 Protein Homology CDS 4310892 4313225 . + 0 ID=cds3903;Parent=gene3987;Dbxref=Genbank:WP_002211518.1;Name=WP_002211518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211518.1;transl_table=11 NC_014029.1 RefSeq gene 4313243 4313929 . + . ID=gene3988;Name=YPZ3_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19985;old_locus_tag=YPZ3_3355 NC_014029.1 Protein Homology CDS 4313243 4313929 . + 0 ID=cds3904;Parent=gene3988;Dbxref=Genbank:WP_002211517.1;Name=WP_002211517.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211517.1;transl_table=11 NC_014029.1 RefSeq gene 4313901 4314548 . + . ID=gene3989;Name=YPZ3_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19990;old_locus_tag=YPZ3_3356 NC_014029.1 Protein Homology CDS 4313901 4314548 . + 0 ID=cds3905;Parent=gene3989;Dbxref=Genbank:WP_002211516.1;Name=WP_002211516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211516.1;transl_table=11 NC_014029.1 RefSeq gene 4314610 4315128 . + . ID=gene3990;Name=YPZ3_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS19995;old_locus_tag=YPZ3_3357 NC_014029.1 Protein Homology CDS 4314610 4315128 . + 0 ID=cds3906;Parent=gene3990;Dbxref=Genbank:WP_002211515.1;Name=WP_002211515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211515.1;transl_table=11 NC_014029.1 RefSeq gene 4315304 4316410 . + . ID=gene3991;Name=YPZ3_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20000;old_locus_tag=YPZ3_3358 NC_014029.1 Protein Homology CDS 4315304 4316410 . + 0 ID=cds3907;Parent=gene3991;Dbxref=Genbank:WP_002211514.1;Name=WP_002211514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211514.1;transl_table=11 NC_014029.1 RefSeq gene 4316525 4316986 . - . ID=gene3992;Name=YPZ3_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20005;old_locus_tag=YPZ3_3359 NC_014029.1 Protein Homology CDS 4316525 4316986 . - 0 ID=cds3908;Parent=gene3992;Dbxref=Genbank:WP_002211513.1;Name=WP_002211513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211513.1;transl_table=11 NC_014029.1 RefSeq gene 4317214 4317915 . - . ID=gene3993;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YPZ3_RS20010;old_locus_tag=YPZ3_3360 NC_014029.1 Protein Homology CDS 4317214 4317915 . - 0 ID=cds3909;Parent=gene3993;Dbxref=Genbank:WP_002211512.1;Name=WP_002211512.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211512.1;transl_table=11 NC_014029.1 RefSeq gene 4317960 4318727 . - . ID=gene3994;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YPZ3_RS20015;old_locus_tag=YPZ3_3361 NC_014029.1 Protein Homology CDS 4317960 4318727 . - 0 ID=cds3910;Parent=gene3994;Dbxref=Genbank:WP_002211511.1;Name=WP_002211511.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211511.1;transl_table=11 NC_014029.1 RefSeq gene 4318724 4320010 . - . ID=gene3995;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YPZ3_RS20020;old_locus_tag=YPZ3_3362 NC_014029.1 Protein Homology CDS 4318724 4320010 . - 0 ID=cds3911;Parent=gene3995;Dbxref=Genbank:WP_002211510.1;Name=WP_002211510.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_002211510.1;transl_table=11 NC_014029.1 RefSeq gene 4320007 4320933 . - . ID=gene3996;Name=YPZ3_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20025;old_locus_tag=YPZ3_3363 NC_014029.1 Protein Homology CDS 4320007 4320933 . - 0 ID=cds3912;Parent=gene3996;Dbxref=Genbank:WP_002211509.1;Name=WP_002211509.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_002211509.1;transl_table=11 NC_014029.1 RefSeq gene 4321114 4322229 . - . ID=gene3997;Name=YPZ3_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20030;old_locus_tag=YPZ3_3364 NC_014029.1 Protein Homology CDS 4321114 4322229 . - 0 ID=cds3913;Parent=gene3997;Dbxref=Genbank:WP_002211508.1;Name=WP_002211508.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002211508.1;transl_table=11 NC_014029.1 RefSeq gene 4322651 4323043 . + . ID=gene3998;Name=YPZ3_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20035;old_locus_tag=YPZ3_3365 NC_014029.1 Protein Homology CDS 4322651 4323043 . + 0 ID=cds3914;Parent=gene3998;Dbxref=Genbank:WP_002211507.1;Name=WP_002211507.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002211507.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4323177 4323898 . + . ID=id338;gbkey=repeat_region NC_014029.1 RefSeq gene 4323289 4323747 . - . ID=gene3999;Name=YPZ3_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20040;old_locus_tag=YPZ3_3366 NC_014029.1 Protein Homology CDS 4323289 4323747 . - 0 ID=cds3915;Parent=gene3999;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014029.1 RefSeq gene 4323737 4323907 . - . ID=gene4000;Name=YPZ3_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20045 NC_014029.1 Protein Homology CDS 4323737 4323907 . - 0 ID=cds3916;Parent=gene4000;Dbxref=Genbank:WP_029787950.1;Name=WP_029787950.1;gbkey=CDS;product=transposase;protein_id=WP_029787950.1;transl_table=11 NC_014029.1 RefSeq gene 4323961 4324818 . - . ID=gene4001;Name=YPZ3_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20050;old_locus_tag=YPZ3_3367 NC_014029.1 Protein Homology CDS 4323961 4324818 . - 0 ID=cds3917;Parent=gene4001;Dbxref=Genbank:WP_002211506.1;Name=WP_002211506.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_002211506.1;transl_table=11 NC_014029.1 RefSeq gene 4325129 4326082 . - . ID=gene4002;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YPZ3_RS20055;old_locus_tag=YPZ3_3368 NC_014029.1 Protein Homology CDS 4325129 4326082 . - 0 ID=cds3918;Parent=gene4002;Dbxref=Genbank:WP_002211505.1;Name=WP_002211505.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NC_014029.1 RefSeq gene 4326072 4326740 . - . ID=gene4003;Name=YPZ3_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20060;old_locus_tag=YPZ3_3369 NC_014029.1 Protein Homology CDS 4326072 4326740 . - 0 ID=cds3919;Parent=gene4003;Dbxref=Genbank:WP_002211504.1;Name=WP_002211504.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_002211504.1;transl_table=11 NC_014029.1 RefSeq gene 4326746 4328407 . - . ID=gene4004;Name=YPZ3_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20065;old_locus_tag=YPZ3_3370 NC_014029.1 Protein Homology CDS 4326746 4328407 . - 0 ID=cds3920;Parent=gene4004;Dbxref=Genbank:WP_002224010.1;Name=WP_002224010.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_002224010.1;transl_table=11 NC_014029.1 RefSeq gene 4328436 4328579 . + . ID=gene4005;Name=YPZ3_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20070 NC_014029.1 Protein Homology CDS 4328436 4328579 . + 0 ID=cds3921;Parent=gene4005;Dbxref=Genbank:WP_002215975.1;Name=WP_002215975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215975.1;transl_table=11 NC_014029.1 RefSeq gene 4328689 4329351 . + . ID=gene4006;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YPZ3_RS20075 NC_014029.1 Protein Homology CDS 4328689 4329351 . + 0 ID=cds3922;Parent=gene4006;Dbxref=Genbank:WP_002211502.1;Name=WP_002211502.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_002211502.1;transl_table=11 NC_014029.1 RefSeq gene 4329341 4329613 . + . ID=gene4007;Name=YPZ3_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20080 NC_014029.1 Protein Homology CDS 4329341 4329613 . + 0 ID=cds3923;Parent=gene4007;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11 NC_014029.1 RefSeq gene 4329800 4330219 . - . ID=gene4008;Name=YPZ3_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20085;old_locus_tag=YPZ3_3372 NC_014029.1 Protein Homology CDS 4329800 4330219 . - 0 ID=cds3924;Parent=gene4008;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11 NC_014029.1 RefSeq gene 4330431 4330751 . - . ID=gene4009;Name=YPZ3_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20090;old_locus_tag=YPZ3_3373 NC_014029.1 Protein Homology CDS 4330431 4330751 . - 0 ID=cds3925;Parent=gene4009;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11 NC_014029.1 RefSeq gene 4331041 4331667 . + . ID=gene4010;Name=YPZ3_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20095;old_locus_tag=YPZ3_3374 NC_014029.1 Protein Homology CDS 4331041 4331667 . + 0 ID=cds3926;Parent=gene4010;Dbxref=Genbank:WP_002211498.1;Name=WP_002211498.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211498.1;transl_table=11 NC_014029.1 RefSeq gene 4332081 4334447 . + . ID=gene4011;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=YPZ3_RS20100;old_locus_tag=YPZ3_3375 NC_014029.1 Protein Homology CDS 4332081 4334447 . + 0 ID=cds3927;Parent=gene4011;Dbxref=Genbank:WP_002211497.1;Name=WP_002211497.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=cadmium-transporting ATPase;protein_id=WP_002211497.1;transl_table=11 NC_014029.1 RefSeq gene 4334547 4334801 . - . ID=gene4012;Name=YPZ3_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20105 NC_014029.1 Protein Homology CDS 4334547 4334801 . - 0 ID=cds3928;Parent=gene4012;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NC_014029.1 RefSeq gene 4335085 4335753 . + . ID=gene4013;Name=YPZ3_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20110;old_locus_tag=YPZ3_3377 NC_014029.1 Protein Homology CDS 4335085 4335753 . + 0 ID=cds3929;Parent=gene4013;Dbxref=Genbank:WP_002211495.1;Name=WP_002211495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211495.1;transl_table=11 NC_014029.1 RefSeq gene 4335883 4336410 . + . ID=gene4014;Name=YPZ3_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20115;old_locus_tag=YPZ3_3378 NC_014029.1 Protein Homology CDS 4335883 4336410 . + 0 ID=cds3930;Parent=gene4014;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11 NC_014029.1 RefSeq gene 4336572 4337867 . - . ID=gene4015;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YPZ3_RS20120;old_locus_tag=YPZ3_3379 NC_014029.1 Protein Homology CDS 4336572 4337867 . - 0 ID=cds3931;Parent=gene4015;Dbxref=Genbank:WP_002211493.1;Name=WP_002211493.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_002211493.1;transl_table=11 NC_014029.1 RefSeq gene 4337864 4339138 . - . ID=gene4016;Name=YPZ3_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20125;old_locus_tag=YPZ3_3380 NC_014029.1 Protein Homology CDS 4337864 4339138 . - 0 ID=cds3932;Parent=gene4016;Dbxref=Genbank:WP_002211492.1;Name=WP_002211492.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_002211492.1;transl_table=11 NC_014029.1 RefSeq gene 4339128 4340783 . - . ID=gene4017;Name=YPZ3_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20130;old_locus_tag=YPZ3_3381 NC_014029.1 Protein Homology CDS 4339128 4340783 . - 0 ID=cds3933;Parent=gene4017;Dbxref=Genbank:WP_002211491.1;Name=WP_002211491.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002211491.1;transl_table=11 NC_014029.1 RefSeq gene 4340957 4341055 . - . ID=gene4018;Name=YPZ3_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20135 NC_014029.1 Protein Homology CDS 4340957 4341055 . - 0 ID=cds3934;Parent=gene4018;Dbxref=Genbank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002216569.1;transl_table=11 NC_014029.1 RefSeq gene 4341408 4342523 . + . ID=gene4019;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YPZ3_RS20140;old_locus_tag=YPZ3_3382 NC_014029.1 Protein Homology CDS 4341408 4342523 . + 0 ID=cds3935;Parent=gene4019;Dbxref=Genbank:WP_002211490.1;Name=WP_002211490.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NC_014029.1 RefSeq gene 4342597 4343796 . - . ID=gene4020;Name=YPZ3_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20145;old_locus_tag=YPZ3_3383 NC_014029.1 Protein Homology CDS 4342597 4343796 . - 0 ID=cds3936;Parent=gene4020;Dbxref=Genbank:WP_002366764.1;Name=WP_002366764.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_002366764.1;transl_table=11 NC_014029.1 RefSeq gene 4344073 4344882 . - . ID=gene4021;Name=YPZ3_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20150;old_locus_tag=YPZ3_3384 NC_014029.1 Protein Homology CDS 4344073 4344882 . - 0 ID=cds3937;Parent=gene4021;Dbxref=Genbank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211488.1;transl_table=11 NC_014029.1 RefSeq gene 4344917 4345930 . - . ID=gene4022;Name=YPZ3_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20155;old_locus_tag=YPZ3_3385 NC_014029.1 Protein Homology CDS 4344917 4345930 . - 0 ID=cds3938;Parent=gene4022;Dbxref=Genbank:WP_002211487.1;Name=WP_002211487.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NC_014029.1 RefSeq gene 4346126 4346746 . + . ID=gene4023;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YPZ3_RS20160;old_locus_tag=YPZ3_3386 NC_014029.1 Protein Homology CDS 4346126 4346746 . + 0 ID=cds3939;Parent=gene4023;Dbxref=Genbank:WP_002211486.1;Name=WP_002211486.1;gbkey=CDS;gene=rhtB;product=threonine transporter RhtB;protein_id=WP_002211486.1;transl_table=11 NC_014029.1 RefSeq gene 4346797 4347417 . - . ID=gene4024;Name=YPZ3_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20165;old_locus_tag=YPZ3_3387 NC_014029.1 Protein Homology CDS 4346797 4347417 . - 0 ID=cds3940;Parent=gene4024;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11 NC_014029.1 RefSeq gene 4347524 4349356 . - . ID=gene4025;Name=YPZ3_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20170;old_locus_tag=YPZ3_3388 NC_014029.1 Protein Homology CDS 4347524 4349356 . - 0 ID=cds3941;Parent=gene4025;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NC_014029.1 RefSeq gene 4349434 4350312 . - . ID=gene4026;Name=YPZ3_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20175;old_locus_tag=YPZ3_3389 NC_014029.1 Protein Homology CDS 4349434 4350312 . - 0 ID=cds3942;Parent=gene4026;Dbxref=Genbank:WP_002211483.1;Name=WP_002211483.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NC_014029.1 RefSeq gene 4350534 4351004 . + . ID=gene4027;Name=YPZ3_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20180;old_locus_tag=YPZ3_3390 NC_014029.1 Protein Homology CDS 4350534 4351004 . + 0 ID=cds3943;Parent=gene4027;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11 NC_014029.1 RefSeq gene 4351091 4351981 . + . ID=gene4028;Name=YPZ3_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20185;old_locus_tag=YPZ3_3391 NC_014029.1 Protein Homology CDS 4351091 4351981 . + 0 ID=cds3944;Parent=gene4028;Dbxref=Genbank:WP_002211481.1;Name=WP_002211481.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_002211481.1;transl_table=11 NC_014029.1 RefSeq gene 4352079 4353029 . - . ID=gene4029;Name=YPZ3_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20190;old_locus_tag=YPZ3_3392 NC_014029.1 Protein Homology CDS 4352079 4353029 . - 0 ID=cds3945;Parent=gene4029;Dbxref=Genbank:WP_002211480.1;Name=WP_002211480.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_002211480.1;transl_table=11 NC_014029.1 RefSeq gene 4353678 4354508 . - . ID=gene4030;Name=YPZ3_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20195;old_locus_tag=YPZ3_3393 NC_014029.1 Protein Homology CDS 4353678 4354508 . - 0 ID=cds3946;Parent=gene4030;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11 NC_014029.1 RefSeq gene 4354534 4355751 . - . ID=gene4031;Name=YPZ3_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20200;old_locus_tag=YPZ3_3394 NC_014029.1 Protein Homology CDS 4354534 4355751 . - 0 ID=cds3947;Parent=gene4031;Dbxref=Genbank:WP_002211477.1;Name=WP_002211477.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211477.1;transl_table=11 NC_014029.1 RefSeq gene 4356179 4356865 . + . ID=gene4032;Name=YPZ3_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20205;old_locus_tag=YPZ3_3395 NC_014029.1 Protein Homology CDS 4356179 4356865 . + 0 ID=cds3948;Parent=gene4032;Dbxref=Genbank:WP_002211476.1;Name=WP_002211476.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002211476.1;transl_table=11 NC_014029.1 RefSeq gene 4356979 4359141 . - . ID=gene4033;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=YPZ3_RS20210;old_locus_tag=YPZ3_3396 NC_014029.1 Protein Homology CDS 4356979 4359141 . - 0 ID=cds3949;Parent=gene4033;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11 NC_014029.1 RefSeq gene 4359243 4359959 . - . ID=gene4034;Name=YPZ3_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20215;old_locus_tag=YPZ3_3397 NC_014029.1 Protein Homology CDS 4359243 4359959 . - 0 ID=cds3950;Parent=gene4034;Dbxref=Genbank:WP_002211474.1;Name=WP_002211474.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_002211474.1;transl_table=11 NC_014029.1 RefSeq gene 4359959 4360870 . - . ID=gene4035;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YPZ3_RS20220;old_locus_tag=YPZ3_3398 NC_014029.1 Protein Homology CDS 4359959 4360870 . - 0 ID=cds3951;Parent=gene4035;Dbxref=Genbank:WP_002211473.1;Name=WP_002211473.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NC_014029.1 RefSeq gene 4360867 4361571 . - . ID=gene4036;Name=YPZ3_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20225;old_locus_tag=YPZ3_3399 NC_014029.1 Protein Homology CDS 4360867 4361571 . - 0 ID=cds3952;Parent=gene4036;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11 NC_014029.1 RefSeq gene 4361636 4362460 . - . ID=gene4037;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YPZ3_RS20230;old_locus_tag=YPZ3_3400 NC_014029.1 Protein Homology CDS 4361636 4362460 . - 0 ID=cds3953;Parent=gene4037;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NC_014029.1 RefSeq gene 4362644 4362832 . - . ID=gene4038;Name=YPZ3_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20235 NC_014029.1 Protein Homology CDS 4362644 4362832 . - 0 ID=cds3954;Parent=gene4038;Dbxref=Genbank:WP_002211470.1;Name=WP_002211470.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211470.1;transl_table=11 NC_014029.1 RefSeq gene 4362984 4363304 . + . ID=gene4039;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YPZ3_RS20240;old_locus_tag=YPZ3_3401 NC_014029.1 Protein Homology CDS 4362984 4363304 . + 0 ID=cds3955;Parent=gene4039;Dbxref=Genbank:WP_002211469.1;Name=WP_002211469.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_002211469.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4363339 4363511 . + . ID=id339;gbkey=repeat_region NC_014029.1 RefSeq gene 4363548 4366100 . - . ID=gene4040;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=YPZ3_RS20245;old_locus_tag=YPZ3_3402 NC_014029.1 Protein Homology CDS 4363548 4366100 . - 0 ID=cds3956;Parent=gene4040;Dbxref=Genbank:WP_002211468.1;Name=WP_002211468.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_002211468.1;transl_table=11 NC_014029.1 RefSeq gene 4366594 4367535 . + . ID=gene4041;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YPZ3_RS20250;old_locus_tag=YPZ3_3403 NC_014029.1 Protein Homology CDS 4366594 4367535 . + 0 ID=cds3957;Parent=gene4041;Dbxref=Genbank:WP_002211465.1;Name=WP_002211465.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_002211465.1;transl_table=11 NC_014029.1 RefSeq gene 4367532 4368281 . + . ID=gene4042;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YPZ3_RS20255;old_locus_tag=YPZ3_3404 NC_014029.1 Protein Homology CDS 4367532 4368281 . + 0 ID=cds3958;Parent=gene4042;Dbxref=Genbank:WP_002211464.1;Name=WP_002211464.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211464.1;transl_table=11 NC_014029.1 RefSeq gene 4368312 4369436 . + . ID=gene4043;Name=YPZ3_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20260;old_locus_tag=YPZ3_3405 NC_014029.1 Protein Homology CDS 4368312 4369436 . + 0 ID=cds3959;Parent=gene4043;Dbxref=Genbank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211463.1;transl_table=11 NC_014029.1 RefSeq gene 4369439 4370659 . + . ID=gene4044;Name=YPZ3_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20265;old_locus_tag=YPZ3_3406 NC_014029.1 Protein Homology CDS 4369439 4370659 . + 0 ID=cds3960;Parent=gene4044;Dbxref=Genbank:WP_002211462.1;Name=WP_002211462.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_002211462.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4370740 4371461 . + . ID=id340;gbkey=repeat_region NC_014029.1 RefSeq gene 4370852 4371310 . - . ID=gene4045;Name=YPZ3_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20270;old_locus_tag=YPZ3_3407 NC_014029.1 Protein Homology CDS 4370852 4371310 . - 0 ID=cds3961;Parent=gene4045;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_014029.1 RefSeq gene 4372177 4372253 . - . ID=gene4046;Name=YPZ3_RS20275;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS20275;old_locus_tag=YPZ3_t61 NC_014029.1 tRNAscan-SE tRNA 4372177 4372253 . - . ID=rna77;Parent=gene4046;anticodon=(pos:complement(4372217..4372219));gbkey=tRNA;product=tRNA-Pro NC_014029.1 tRNAscan-SE exon 4372177 4372253 . - . ID=id341;Parent=rna77;anticodon=(pos:complement(4372217..4372219));gbkey=tRNA;product=tRNA-Pro NC_014029.1 RefSeq gene 4372329 4372415 . - . ID=gene4047;Name=YPZ3_RS20280;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS20280;old_locus_tag=YPZ3_t62 NC_014029.1 tRNAscan-SE tRNA 4372329 4372415 . - . ID=rna78;Parent=gene4047;anticodon=(pos:complement(4372379..4372381));gbkey=tRNA;product=tRNA-Leu NC_014029.1 tRNAscan-SE exon 4372329 4372415 . - . ID=id342;Parent=rna78;anticodon=(pos:complement(4372379..4372381));gbkey=tRNA;product=tRNA-Leu NC_014029.1 RefSeq gene 4372432 4372507 . - . ID=gene4048;Name=YPZ3_RS20285;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS20285;old_locus_tag=YPZ3_t63 NC_014029.1 tRNAscan-SE tRNA 4372432 4372507 . - . ID=rna79;Parent=gene4048;anticodon=(pos:complement(4372472..4372474));gbkey=tRNA;product=tRNA-His NC_014029.1 tRNAscan-SE exon 4372432 4372507 . - . ID=id343;Parent=rna79;anticodon=(pos:complement(4372472..4372474));gbkey=tRNA;product=tRNA-His NC_014029.1 RefSeq gene 4372591 4372667 . - . ID=gene4049;Name=YPZ3_RS20290;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS20290;old_locus_tag=YPZ3_t64 NC_014029.1 tRNAscan-SE tRNA 4372591 4372667 . - . ID=rna80;Parent=gene4049;anticodon=(pos:complement(4372631..4372633));gbkey=tRNA;product=tRNA-Arg NC_014029.1 tRNAscan-SE exon 4372591 4372667 . - . ID=id344;Parent=rna80;anticodon=(pos:complement(4372631..4372633));gbkey=tRNA;product=tRNA-Arg NC_014029.1 RefSeq gene 4372816 4374207 . - . ID=gene4050;Name=YPZ3_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20295;old_locus_tag=YPZ3_3408 NC_014029.1 Protein Homology CDS 4372816 4374207 . - 0 ID=cds3962;Parent=gene4050;Dbxref=Genbank:WP_002220976.1;Name=WP_002220976.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220976.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4374332 4374457 . + . ID=id345;gbkey=repeat_region NC_014029.1 RefSeq gene 4374731 4375471 . - . ID=gene4051;Name=YPZ3_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20300;old_locus_tag=YPZ3_3409 NC_014029.1 Protein Homology CDS 4374731 4375471 . - 0 ID=cds3963;Parent=gene4051;Dbxref=Genbank:WP_002211977.1;Name=WP_002211977.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_002211977.1;transl_table=11 NC_014029.1 RefSeq gene 4375480 4376844 . - . ID=gene4052;Name=YPZ3_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20305;old_locus_tag=YPZ3_3410 NC_014029.1 Protein Homology CDS 4375480 4376844 . - 0 ID=cds3964;Parent=gene4052;Dbxref=Genbank:WP_002211978.1;Name=WP_002211978.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=polymerase;protein_id=WP_002211978.1;transl_table=11 NC_014029.1 RefSeq gene 4376841 4377926 . - . ID=gene4053;Name=YPZ3_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20310;old_locus_tag=YPZ3_3411 NC_014029.1 Protein Homology CDS 4376841 4377926 . - 0 ID=cds3965;Parent=gene4053;Dbxref=Genbank:WP_002211979.1;Name=WP_002211979.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_002211979.1;transl_table=11 NC_014029.1 RefSeq gene 4377949 4379205 . - . ID=gene4054;Name=YPZ3_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20315;old_locus_tag=YPZ3_3412 NC_014029.1 Protein Homology CDS 4377949 4379205 . - 0 ID=cds3966;Parent=gene4054;Dbxref=Genbank:WP_002211980.1;Name=WP_002211980.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=translocase;protein_id=WP_002211980.1;transl_table=11 NC_014029.1 RefSeq gene 4379207 4380337 . - . ID=gene4055;Name=YPZ3_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20320;old_locus_tag=YPZ3_3413 NC_014029.1 Protein Homology CDS 4379207 4380337 . - 0 ID=cds3967;Parent=gene4055;Dbxref=Genbank:WP_002211981.1;Name=WP_002211981.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_002211981.1;transl_table=11 NC_014029.1 RefSeq gene 4380339 4381076 . - . ID=gene4056;Name=YPZ3_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20325;old_locus_tag=YPZ3_3414 NC_014029.1 Protein Homology CDS 4380339 4381076 . - 0 ID=cds3968;Parent=gene4056;Dbxref=Genbank:WP_002211982.1;Name=WP_002211982.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_002211982.1;transl_table=11 NC_014029.1 RefSeq gene 4381054 4381935 . - . ID=gene4057;Name=YPZ3_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20330;old_locus_tag=YPZ3_3415 NC_014029.1 Protein Homology CDS 4381054 4381935 . - 0 ID=cds3969;Parent=gene4057;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11 NC_014029.1 RefSeq gene 4382230 4383297 . - . ID=gene4058;Name=YPZ3_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20335;old_locus_tag=YPZ3_3416 NC_014029.1 Protein Homology CDS 4382230 4383297 . - 0 ID=cds3970;Parent=gene4058;Dbxref=Genbank:WP_002211984.1;Name=WP_002211984.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_002211984.1;transl_table=11 NC_014029.1 RefSeq gene 4383294 4384556 . - . ID=gene4059;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YPZ3_RS20340;old_locus_tag=YPZ3_3417 NC_014029.1 Protein Homology CDS 4383294 4384556 . - 0 ID=cds3971;Parent=gene4059;Dbxref=Genbank:WP_002211985.1;Name=WP_002211985.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NC_014029.1 RefSeq gene 4384553 4385683 . - . ID=gene4060;Name=YPZ3_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20345;old_locus_tag=YPZ3_3418 NC_014029.1 Protein Homology CDS 4384553 4385683 . - 0 ID=cds3972;Parent=gene4060;Dbxref=Genbank:WP_002211986.1;Name=WP_002211986.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_002211986.1;transl_table=11 NC_014029.1 RefSeq gene 4385964 4387040 . - . ID=gene4061;Name=YPZ3_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20350;old_locus_tag=YPZ3_3419 NC_014029.1 Protein Homology CDS 4385964 4387040 . - 0 ID=cds3973;Parent=gene4061;Dbxref=Genbank:WP_002226022.1;Name=WP_002226022.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002226022.1;transl_table=11 NC_014029.1 RefSeq gene 4387061 4388143 . - . ID=gene4062;Name=YPZ3_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20355;old_locus_tag=YPZ3_3420 NC_014029.1 Protein Homology CDS 4387061 4388143 . - 0 ID=cds3974;Parent=gene4062;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11 NC_014029.1 RefSeq gene 4388693 4389952 . - . ID=gene4063;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YPZ3_RS20360;old_locus_tag=YPZ3_3421 NC_014029.1 Protein Homology CDS 4388693 4389952 . - 0 ID=cds3975;Parent=gene4063;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NC_014029.1 RefSeq gene 4390432 4390758 . - . ID=gene4064;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YPZ3_RS20365;old_locus_tag=YPZ3_3422 NC_014029.1 Protein Homology CDS 4390432 4390758 . - 0 ID=cds3976;Parent=gene4064;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11 NC_014029.1 RefSeq gene 4390877 4392163 . + . ID=gene4065;Name=YPZ3_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20370;old_locus_tag=YPZ3_3423 NC_014029.1 Protein Homology CDS 4390877 4392163 . + 0 ID=cds3977;Parent=gene4065;Dbxref=Genbank:WP_002228177.1;Name=WP_002228177.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11 NC_014029.1 RefSeq gene 4392355 4392672 . + . ID=gene4066;Name=YPZ3_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20375 NC_014029.1 Protein Homology CDS 4392355 4392672 . + 0 ID=cds3978;Parent=gene4066;Dbxref=Genbank:WP_002229742.1;Name=WP_002229742.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphatepyrophosphatase;protein_id=WP_002229742.1;transl_table=11 NC_014029.1 RefSeq gene 4392651 4393661 . + . ID=gene4067;Name=YPZ3_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20380;old_locus_tag=YPZ3_3424 NC_014029.1 Protein Homology CDS 4392651 4393661 . + 0 ID=cds3979;Parent=gene4067;Dbxref=Genbank:WP_002355446.1;Name=WP_002355446.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_002355446.1;transl_table=11 NC_014029.1 RefSeq gene 4393829 4395850 . - . ID=gene4068;Name=YPZ3_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20385;old_locus_tag=YPZ3_3425 NC_014029.1 Protein Homology CDS 4393829 4395850 . - 0 ID=cds3980;Parent=gene4068;Dbxref=Genbank:WP_002211993.1;Name=WP_002211993.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_002211993.1;transl_table=11 NC_014029.1 RefSeq gene 4395849 4396034 . + . ID=gene4069;Name=YPZ3_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20390 NC_014029.1 Protein Homology CDS 4395849 4396034 . + 0 ID=cds3981;Parent=gene4069;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NC_014029.1 RefSeq gene 4396054 4396335 . + . ID=gene4070;Name=YPZ3_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20395 NC_014029.1 Protein Homology CDS 4396054 4396335 . + 0 ID=cds3982;Parent=gene4070;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11 NC_014029.1 RefSeq gene 4396574 4397365 . + . ID=gene4071;Name=YPZ3_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20400;old_locus_tag=YPZ3_3426 NC_014029.1 Protein Homology CDS 4396574 4397365 . + 0 ID=cds3983;Parent=gene4071;Dbxref=Genbank:WP_002211996.1;Name=WP_002211996.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_002211996.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4397390 4398707 . + . ID=id346;gbkey=repeat_region NC_014029.1 RefSeq gene 4397462 4398670 . + . ID=gene4072;Name=YPZ3_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20405;old_locus_tag=YPZ3_3427 NC_014029.1 Protein Homology CDS 4397462 4398670 . + 0 ID=cds3984;Parent=gene4072;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014029.1 RefSeq gene 4398993 4399169 . - . ID=gene4073;Name=YPZ3_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20410 NC_014029.1 Protein Homology CDS 4398993 4399169 . - 0 ID=cds3985;Parent=gene4073;Dbxref=Genbank:WP_002231894.1;Name=WP_002231894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231894.1;transl_table=11 NC_014029.1 RefSeq gene 4399480 4400010 . + . ID=gene4074;Name=YPZ3_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20415;old_locus_tag=YPZ3_3428 NC_014029.1 Protein Homology CDS 4399480 4400010 . + 0 ID=cds3986;Parent=gene4074;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NC_014029.1 RefSeq gene 4400074 4400805 . + . ID=gene4075;Name=YPZ3_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20420;old_locus_tag=YPZ3_3429 NC_014029.1 Protein Homology CDS 4400074 4400805 . + 0 ID=cds3987;Parent=gene4075;Dbxref=Genbank:WP_002211998.1;Name=WP_002211998.1;gbkey=CDS;product=gram-negative pili assembly chaperone;protein_id=WP_002211998.1;transl_table=11 NC_014029.1 RefSeq gene 4400833 4403460 . + . ID=gene4076;Name=YPZ3_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20425;old_locus_tag=YPZ3_3430 NC_014029.1 Protein Homology CDS 4400833 4403460 . + 0 ID=cds3988;Parent=gene4076;Dbxref=Genbank:WP_002211999.1;Name=WP_002211999.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211999.1;transl_table=11 NC_014029.1 RefSeq gene 4403567 4404844 . + . ID=gene4077;Name=YPZ3_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20430;old_locus_tag=YPZ3_3431 NC_014029.1 Protein Homology CDS 4403567 4404844 . + 0 ID=cds3989;Parent=gene4077;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11 NC_014029.1 RefSeq gene 4404810 4405628 . + . ID=gene4078;Name=YPZ3_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20435;old_locus_tag=YPZ3_3432 NC_014029.1 Protein Homology CDS 4404810 4405628 . + 0 ID=cds3990;Parent=gene4078;Dbxref=Genbank:WP_002215825.1;Name=WP_002215825.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002215825.1;transl_table=11 NC_014029.1 RefSeq gene 4405652 4405810 . + . ID=gene4079;Name=YPZ3_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20440 NC_014029.1 Protein Homology CDS 4405652 4405810 . + 0 ID=cds3991;Parent=gene4079;Dbxref=Genbank:WP_002212002.1;Name=WP_002212002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212002.1;transl_table=11 NC_014029.1 RefSeq gene 4406263 4406520 . - . ID=gene4080;Name=YPZ3_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20445 NC_014029.1 Protein Homology CDS 4406263 4406520 . - 0 ID=cds3992;Parent=gene4080;Dbxref=Genbank:WP_002212003.1;Name=WP_002212003.1;gbkey=CDS;product=colicin transporter;protein_id=WP_002212003.1;transl_table=11 NC_014029.1 RefSeq gene 4406522 4406773 . - . ID=gene4081;Name=YPZ3_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20450 NC_014029.1 Protein Homology CDS 4406522 4406773 . - 0 ID=cds3993;Parent=gene4081;Dbxref=Genbank:WP_002215823.1;Name=WP_002215823.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_002215823.1;transl_table=11 NC_014029.1 RefSeq gene 4407026 4407289 . - . ID=gene4082;Name=YPZ3_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20455 NC_014029.1 Protein Homology CDS 4407026 4407289 . - 0 ID=cds3994;Parent=gene4082;Dbxref=Genbank:WP_002212004.1;Name=WP_002212004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212004.1;transl_table=11 NC_014029.1 RefSeq gene 4407289 4408719 . - . ID=gene4083;Name=YPZ3_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20460;old_locus_tag=YPZ3_3433 NC_014029.1 Protein Homology CDS 4407289 4408719 . - 0 ID=cds3995;Parent=gene4083;Dbxref=Genbank:WP_002212005.1;Name=WP_002212005.1;gbkey=CDS;product=colicin;protein_id=WP_002212005.1;transl_table=11 NC_014029.1 RefSeq gene 4408927 4409127 . - . ID=gene4084;Name=YPZ3_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20465 NC_014029.1 Protein Homology CDS 4408927 4409127 . - 0 ID=cds3996;Parent=gene4084;Dbxref=Genbank:WP_002212006.1;Name=WP_002212006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212006.1;transl_table=11 NC_014029.1 RefSeq gene 4409308 4410786 . - . ID=gene4085;Name=YPZ3_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20470;old_locus_tag=YPZ3_3434 NC_014029.1 Protein Homology CDS 4409308 4410786 . - 0 ID=cds3997;Parent=gene4085;Dbxref=Genbank:WP_002212007.1;Name=WP_002212007.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_002212007.1;transl_table=11 NC_014029.1 RefSeq gene 4411072 4411953 . + . ID=gene4086;Name=YPZ3_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20475;old_locus_tag=YPZ3_3435 NC_014029.1 Protein Homology CDS 4411072 4411953 . + 0 ID=cds3998;Parent=gene4086;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11 NC_014029.1 RefSeq gene 4412008 4412217 . - . ID=gene4087;Name=YPZ3_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20480 NC_014029.1 Protein Homology CDS 4412008 4412217 . - 0 ID=cds3999;Parent=gene4087;Dbxref=Genbank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NC_014029.1 RefSeq gene 4412865 4413020 . + . ID=gene4088;Name=YPZ3_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20485 NC_014029.1 Protein Homology CDS 4412865 4413020 . + 0 ID=cds4000;Parent=gene4088;Dbxref=Genbank:WP_002229747.1;Name=WP_002229747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229747.1;transl_table=11 NC_014029.1 RefSeq gene 4413113 4413784 . + . ID=gene4089;Name=YPZ3_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20490;old_locus_tag=YPZ3_3436 NC_014029.1 Protein Homology CDS 4413113 4413784 . + 0 ID=cds4001;Parent=gene4089;Dbxref=Genbank:WP_002230570.1;Name=WP_002230570.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230570.1;transl_table=11 NC_014029.1 RefSeq gene 4413768 4414229 . + . ID=gene4090;Name=YPZ3_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20495;old_locus_tag=YPZ3_3437 NC_014029.1 Protein Homology CDS 4413768 4414229 . + 0 ID=cds4002;Parent=gene4090;Dbxref=Genbank:WP_002384511.1;Name=WP_002384511.1;gbkey=CDS;product=membrane protein;protein_id=WP_002384511.1;transl_table=11 NC_014029.1 RefSeq gene 4414309 4414773 . + . ID=gene4091;Name=YPZ3_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20500;old_locus_tag=YPZ3_3438 NC_014029.1 Protein Homology CDS 4414309 4414773 . + 0 ID=cds4003;Parent=gene4091;Dbxref=Genbank:WP_002216998.1;Name=WP_002216998.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216998.1;transl_table=11 NC_014029.1 RefSeq gene 4414904 4416448 . - . ID=gene4092;Name=YPZ3_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20505;old_locus_tag=YPZ3_3439 NC_014029.1 Protein Homology CDS 4414904 4416448 . - 0 ID=cds4004;Parent=gene4092;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11 NC_014029.1 RefSeq gene 4416454 4418304 . - . ID=gene4093;Name=YPZ3_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20510;old_locus_tag=YPZ3_3440 NC_014029.1 Protein Homology CDS 4416454 4418304 . - 0 ID=cds4005;Parent=gene4093;Dbxref=Genbank:WP_002212014.1;Name=WP_002212014.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11 NC_014029.1 RefSeq gene 4418615 4419541 . - . ID=gene4094;Name=YPZ3_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20515;old_locus_tag=YPZ3_3441 NC_014029.1 Protein Homology CDS 4418615 4419541 . - 0 ID=cds4006;Parent=gene4094;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11 NC_014029.1 RefSeq gene 4419564 4419821 . - . ID=gene4095;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YPZ3_RS20520 NC_014029.1 Protein Homology CDS 4419564 4419821 . - 0 ID=cds4007;Parent=gene4095;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11 NC_014029.1 RefSeq gene 4419818 4421464 . - . ID=gene4096;Name=YPZ3_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20525;old_locus_tag=YPZ3_3442 NC_014029.1 Protein Homology CDS 4419818 4421464 . - 0 ID=cds4008;Parent=gene4096;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11 NC_014029.1 RefSeq gene 4422087 4423610 . + . ID=gene4097;Name=YPZ3_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20530;old_locus_tag=YPZ3_3443 NC_014029.1 Protein Homology CDS 4422087 4423610 . + 0 ID=cds4009;Parent=gene4097;Dbxref=Genbank:WP_002212018.1;Name=WP_002212018.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATPase;protein_id=WP_002212018.1;transl_table=11 NC_014029.1 RefSeq gene 4423867 4424205 . - . ID=gene4098;Name=YPZ3_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20535;old_locus_tag=YPZ3_3444 NC_014029.1 Protein Homology CDS 4423867 4424205 . - 0 ID=cds4010;Parent=gene4098;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11 NC_014029.1 RefSeq gene 4424324 4425205 . + . ID=gene4099;Name=YPZ3_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20540;old_locus_tag=YPZ3_3445 NC_014029.1 Protein Homology CDS 4424324 4425205 . + 0 ID=cds4011;Parent=gene4099;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11 NC_014029.1 RefSeq gene 4425192 4426184 . - . ID=gene4100;Name=YPZ3_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20545;old_locus_tag=YPZ3_3446 NC_014029.1 Protein Homology CDS 4425192 4426184 . - 0 ID=cds4012;Parent=gene4100;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11 NC_014029.1 RefSeq gene 4426184 4427182 . - . ID=gene4101;Name=YPZ3_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20550;old_locus_tag=YPZ3_3447 NC_014029.1 Protein Homology CDS 4426184 4427182 . - 0 ID=cds4013;Parent=gene4101;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11 NC_014029.1 RefSeq gene 4427215 4428705 . - . ID=gene4102;Name=YPZ3_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20555;old_locus_tag=YPZ3_3448 NC_014029.1 Protein Homology CDS 4427215 4428705 . - 0 ID=cds4014;Parent=gene4102;Dbxref=Genbank:WP_002212023.1;Name=WP_002212023.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002212023.1;transl_table=11 NC_014029.1 RefSeq gene 4428791 4429747 . - . ID=gene4103;Name=YPZ3_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20560;old_locus_tag=YPZ3_3449 NC_014029.1 Protein Homology CDS 4428791 4429747 . - 0 ID=cds4015;Parent=gene4103;Dbxref=Genbank:WP_002212024.1;Name=WP_002212024.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002212024.1;transl_table=11 NC_014029.1 RefSeq gene 4430388 4430599 . + . ID=gene4104;Name=YPZ3_RS22175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS22175;pseudo=true NC_014029.1 Protein Homology CDS 4430388 4430599 . + 0 ID=cds4016;Parent=gene4104;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_014029.1 RefSeq gene 4430726 4430801 . - . ID=gene4105;Name=YPZ3_RS20565;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS20565;old_locus_tag=YPZ3_t65 NC_014029.1 tRNAscan-SE tRNA 4430726 4430801 . - . ID=rna81;Parent=gene4105;anticodon=(pos:complement(4430766..4430768));gbkey=tRNA;product=tRNA-Trp NC_014029.1 tRNAscan-SE exon 4430726 4430801 . - . ID=id347;Parent=rna81;anticodon=(pos:complement(4430766..4430768));gbkey=tRNA;product=tRNA-Trp NC_014029.1 RefSeq repeat_region 4430809 4436585 . + . ID=id348;gbkey=repeat_region NC_014029.1 RefSeq gene 4430810 4430886 . - . ID=gene4106;Name=YPZ3_RS20570;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS20570;old_locus_tag=YPZ3_t66 NC_014029.1 tRNAscan-SE tRNA 4430810 4430886 . - . ID=rna82;Parent=gene4106;anticodon=(pos:complement(4430850..4430852));gbkey=tRNA;product=tRNA-Asp NC_014029.1 tRNAscan-SE exon 4430810 4430886 . - . ID=id349;Parent=rna82;anticodon=(pos:complement(4430850..4430852));gbkey=tRNA;product=tRNA-Asp NC_014029.1 RefSeq gene 4431012 4431127 . - . ID=gene4107;Name=YPZ3_RS20575;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS20575;old_locus_tag=YPZ3_r18 NC_014029.1 cmsearch rRNA 4431012 4431127 . - . ID=rna83;Parent=gene4107;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 cmsearch exon 4431012 4431127 . - . ID=id350;Parent=rna83;gbkey=rRNA;product=5S ribosomal RNA NC_014029.1 RefSeq gene 4431219 4434152 . - . ID=gene4108;Name=YPZ3_RS20580;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS20580;old_locus_tag=YPZ3_r19 NC_014029.1 RefSeq rRNA 4431219 4434152 . - . ID=rna84;Parent=gene4108;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq exon 4431219 4434152 . - . ID=id351;Parent=rna84;gbkey=rRNA;product=23S ribosomal RNA NC_014029.1 RefSeq gene 4434396 4434471 . - . ID=gene4109;Name=YPZ3_RS20585;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPZ3_RS20585;old_locus_tag=YPZ3_t67 NC_014029.1 tRNAscan-SE tRNA 4434396 4434471 . - . ID=rna85;Parent=gene4109;anticodon=(pos:complement(4434435..4434437));gbkey=tRNA;product=tRNA-Glu NC_014029.1 tRNAscan-SE exon 4434396 4434471 . - . ID=id352;Parent=rna85;anticodon=(pos:complement(4434435..4434437));gbkey=tRNA;product=tRNA-Glu NC_014029.1 RefSeq gene 4434605 4436153 . - . ID=gene4110;Name=YPZ3_RS20590;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPZ3_RS20590;old_locus_tag=YPZ3_r20 NC_014029.1 RefSeq rRNA 4434605 4436153 . - . ID=rna86;Parent=gene4110;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq exon 4434605 4436153 . - . ID=id353;Parent=rna86;gbkey=rRNA;product=16S ribosomal RNA NC_014029.1 RefSeq gene 4436607 4437470 . - . ID=gene4111;Name=YPZ3_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20600;old_locus_tag=YPZ3_3450 NC_014029.1 Protein Homology CDS 4436607 4437470 . - 0 ID=cds4017;Parent=gene4111;Dbxref=Genbank:WP_002228171.1;Name=WP_002228171.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_002228171.1;transl_table=11 NC_014029.1 RefSeq gene 4437415 4439292 . - . ID=gene4112;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YPZ3_RS20605;old_locus_tag=YPZ3_3451 NC_014029.1 Protein Homology CDS 4437415 4439292 . - 0 ID=cds4018;Parent=gene4112;Dbxref=Genbank:WP_002228170.1;Name=WP_002228170.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_002228170.1;transl_table=11 NC_014029.1 RefSeq gene 4439528 4439773 . - . ID=gene4113;Name=YPZ3_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20610 NC_014029.1 Protein Homology CDS 4439528 4439773 . - 0 ID=cds4019;Parent=gene4113;Dbxref=Genbank:WP_002215343.1;Name=WP_002215343.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215343.1;transl_table=11 NC_014029.1 RefSeq gene 4439772 4440875 . + . ID=gene4114;Name=YPZ3_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20615;old_locus_tag=YPZ3_3452 NC_014029.1 Protein Homology CDS 4439772 4440875 . + 0 ID=cds4020;Parent=gene4114;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11 NC_014029.1 RefSeq gene 4441009 4441416 . - . ID=gene4115;Name=YPZ3_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20620;old_locus_tag=YPZ3_3453 NC_014029.1 Protein Homology CDS 4441009 4441416 . - 0 ID=cds4021;Parent=gene4115;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11 NC_014029.1 RefSeq gene 4441429 4442064 . - . ID=gene4116;Name=YPZ3_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20625;old_locus_tag=YPZ3_3454 NC_014029.1 Protein Homology CDS 4441429 4442064 . - 0 ID=cds4022;Parent=gene4116;Dbxref=Genbank:WP_002209476.1;Name=WP_002209476.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209476.1;transl_table=11 NC_014029.1 RefSeq gene 4442282 4443682 . + . ID=gene4117;Name=YPZ3_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20630;old_locus_tag=YPZ3_3455 NC_014029.1 Protein Homology CDS 4442282 4443682 . + 0 ID=cds4023;Parent=gene4117;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NC_014029.1 RefSeq gene 4443665 4444582 . - . ID=gene4118;Name=YPZ3_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20635;old_locus_tag=YPZ3_3456 NC_014029.1 Protein Homology CDS 4443665 4444582 . - 0 ID=cds4024;Parent=gene4118;Dbxref=Genbank:WP_002209478.1;Name=WP_002209478.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209478.1;transl_table=11 NC_014029.1 RefSeq gene 4444729 4445460 . + . ID=gene4119;Name=YPZ3_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20640;old_locus_tag=YPZ3_3457 NC_014029.1 Protein Homology CDS 4444729 4445460 . + 0 ID=cds4025;Parent=gene4119;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11 NC_014029.1 RefSeq gene 4445555 4447018 . + . ID=gene4120;Name=YPZ3_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20645;old_locus_tag=YPZ3_3458 NC_014029.1 Protein Homology CDS 4445555 4447018 . + 0 ID=cds4026;Parent=gene4120;Dbxref=Genbank:WP_002209480.1;Name=WP_002209480.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209480.1;transl_table=11 NC_014029.1 RefSeq gene 4447134 4447937 . - . ID=gene4121;Name=YPZ3_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20650;old_locus_tag=YPZ3_3459 NC_014029.1 Protein Homology CDS 4447134 4447937 . - 0 ID=cds4027;Parent=gene4121;Dbxref=Genbank:WP_002209481.1;Name=WP_002209481.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002209481.1;transl_table=11 NC_014029.1 RefSeq gene 4448002 4449330 . - . ID=gene4122;Name=YPZ3_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20655;old_locus_tag=YPZ3_3460 NC_014029.1 Protein Homology CDS 4448002 4449330 . - 0 ID=cds4028;Parent=gene4122;Dbxref=Genbank:WP_002209482.1;Name=WP_002209482.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002209482.1;transl_table=11 NC_014029.1 RefSeq gene 4449406 4451214 . - . ID=gene4123;Name=YPZ3_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20660;old_locus_tag=YPZ3_3461 NC_014029.1 Protein Homology CDS 4449406 4451214 . - 0 ID=cds4029;Parent=gene4123;Dbxref=Genbank:WP_002209483.1;Name=WP_002209483.1;gbkey=CDS;product=peptidase;protein_id=WP_002209483.1;transl_table=11 NC_014029.1 RefSeq gene 4451380 4451997 . - . ID=gene4124;Name=YPZ3_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20665;old_locus_tag=YPZ3_3462 NC_014029.1 Protein Homology CDS 4451380 4451997 . - 0 ID=cds4030;Parent=gene4124;Dbxref=Genbank:WP_002209484.1;Name=WP_002209484.1;gbkey=CDS;product=hemophore HasA;protein_id=WP_002209484.1;transl_table=11 NC_014029.1 RefSeq gene 4452219 4454711 . - . ID=gene4125;Name=YPZ3_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20670;old_locus_tag=YPZ3_3463 NC_014029.1 Protein Homology CDS 4452219 4454711 . - 0 ID=cds4031;Parent=gene4125;Dbxref=Genbank:WP_002209485.1;Name=WP_002209485.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209485.1;transl_table=11 NC_014029.1 RefSeq gene 4455022 4455147 . + . ID=gene4126;Name=YPZ3_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20675 NC_014029.1 Protein Homology CDS 4455022 4455147 . + 0 ID=cds4032;Parent=gene4126;Dbxref=Genbank:WP_002209486.1;Name=WP_002209486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209486.1;transl_table=11 NC_014029.1 RefSeq gene 4455310 4456683 . - . ID=gene4127;Name=YPZ3_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20680;old_locus_tag=YPZ3_3464 NC_014029.1 Protein Homology CDS 4455310 4456683 . - 0 ID=cds4033;Parent=gene4127;Dbxref=Genbank:WP_002209487.1;Name=WP_002209487.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11 NC_014029.1 RefSeq gene 4456850 4457623 . - . ID=gene4128;Name=YPZ3_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20685;old_locus_tag=YPZ3_3465 NC_014029.1 Protein Homology CDS 4456850 4457623 . - 0 ID=cds4034;Parent=gene4128;Dbxref=Genbank:WP_002209488.1;Name=WP_002209488.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_002209488.1;transl_table=11 NC_014029.1 RefSeq gene 4457792 4458796 . - . ID=gene4129;Name=YPZ3_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20690;old_locus_tag=YPZ3_3466 NC_014029.1 Protein Homology CDS 4457792 4458796 . - 0 ID=cds4035;Parent=gene4129;Dbxref=Genbank:WP_002209489.1;Name=WP_002209489.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002209489.1;transl_table=11 NC_014029.1 RefSeq gene 4459047 4460210 . + . ID=gene4130;Name=YPZ3_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20695;old_locus_tag=YPZ3_3467 NC_014029.1 Protein Homology CDS 4459047 4460210 . + 0 ID=cds4036;Parent=gene4130;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NC_014029.1 RefSeq gene 4460584 4463220 . + . ID=gene4131;Name=YPZ3_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20700;old_locus_tag=YPZ3_3468 NC_014029.1 Protein Homology CDS 4460584 4463220 . + 0 ID=cds4037;Parent=gene4131;Dbxref=Genbank:WP_002209491.1;Name=WP_002209491.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_002209491.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4463665 4465564 . + . ID=id354;gbkey=repeat_region NC_014029.1 RefSeq gene 4463963 4464478 . + . ID=gene4132;Name=YPZ3_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20705;old_locus_tag=YPZ3_3469 NC_014029.1 Protein Homology CDS 4463963 4464478 . + 0 ID=cds4038;Parent=gene4132;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_014029.1 RefSeq gene 4464532 4465317 . + . ID=gene4133;Name=YPZ3_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20710;old_locus_tag=YPZ3_3470 NC_014029.1 Protein Homology CDS 4464532 4465317 . + 0 ID=cds4039;Parent=gene4133;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_014029.1 RefSeq gene 4465790 4467019 . + . ID=gene4134;Name=YPZ3_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20715;old_locus_tag=YPZ3_3471 NC_014029.1 Protein Homology CDS 4465790 4467019 . + 0 ID=cds4040;Parent=gene4134;Dbxref=Genbank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_002215753.1;transl_table=11 NC_014029.1 RefSeq gene 4467168 4467371 . - . ID=gene4135;Name=YPZ3_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20720 NC_014029.1 Protein Homology CDS 4467168 4467371 . - 0 ID=cds4041;Parent=gene4135;Dbxref=Genbank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11 NC_014029.1 RefSeq gene 4467492 4467650 . + . ID=gene4136;Name=YPZ3_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20725 NC_014029.1 Protein Homology CDS 4467492 4467650 . + 0 ID=cds4042;Parent=gene4136;Dbxref=Genbank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NC_014029.1 RefSeq gene 4467729 4468310 . + . ID=gene4137;Name=YPZ3_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20730;old_locus_tag=YPZ3_3472 NC_014029.1 Protein Homology CDS 4467729 4468310 . + 0 ID=cds4043;Parent=gene4137;Dbxref=Genbank:WP_002215751.1;Name=WP_002215751.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215751.1;transl_table=11 NC_014029.1 RefSeq gene 4468324 4468656 . - . ID=gene4138;Name=YPZ3_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20735;old_locus_tag=YPZ3_3473 NC_014029.1 Protein Homology CDS 4468324 4468656 . - 0 ID=cds4044;Parent=gene4138;Dbxref=Genbank:WP_002215750.1;Name=WP_002215750.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215750.1;transl_table=11 NC_014029.1 RefSeq gene 4468945 4469409 . + . ID=gene4139;Name=YPZ3_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20740;old_locus_tag=YPZ3_3474 NC_014029.1 Protein Homology CDS 4468945 4469409 . + 0 ID=cds4045;Parent=gene4139;Dbxref=Genbank:WP_002209607.1;Name=WP_002209607.1;gbkey=CDS;product=transposase;protein_id=WP_002209607.1;transl_table=11 NC_014029.1 RefSeq gene 4469416 4471368 . - . ID=gene4140;Name=YPZ3_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20745;old_locus_tag=YPZ3_3475 NC_014029.1 Protein Homology CDS 4469416 4471368 . - 0 ID=cds4046;Parent=gene4140;Dbxref=Genbank:WP_002223796.1;Name=WP_002223796.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_002223796.1;transl_table=11 NC_014029.1 RefSeq gene 4471365 4472753 . - . ID=gene4141;Name=YPZ3_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20750;old_locus_tag=YPZ3_3476 NC_014029.1 Protein Homology CDS 4471365 4472753 . - 0 ID=cds4047;Parent=gene4141;Dbxref=Genbank:WP_002209608.1;Name=WP_002209608.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_002209608.1;transl_table=11 NC_014029.1 RefSeq gene 4472937 4473866 . - . ID=gene4142;Name=YPZ3_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20755;old_locus_tag=YPZ3_3477 NC_014029.1 Protein Homology CDS 4472937 4473866 . - 0 ID=cds4048;Parent=gene4142;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11 NC_014029.1 RefSeq gene 4473866 4474540 . - . ID=gene4143;Name=YPZ3_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20760;old_locus_tag=YPZ3_3478 NC_014029.1 Protein Homology CDS 4473866 4474540 . - 0 ID=cds4049;Parent=gene4143;Dbxref=Genbank:WP_002209610.1;Name=WP_002209610.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_002209610.1;transl_table=11 NC_014029.1 RefSeq gene 4474537 4475508 . - . ID=gene4144;Name=YPZ3_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20765;old_locus_tag=YPZ3_3479 NC_014029.1 Protein Homology CDS 4474537 4475508 . - 0 ID=cds4050;Parent=gene4144;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11 NC_014029.1 RefSeq gene 4475521 4477932 . - . ID=gene4145;Name=YPZ3_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20770;old_locus_tag=YPZ3_3480 NC_014029.1 Protein Homology CDS 4475521 4477932 . - 0 ID=cds4051;Parent=gene4145;Dbxref=Genbank:WP_002231683.1;Name=WP_002231683.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_002231683.1;transl_table=11 NC_014029.1 RefSeq gene 4477981 4478568 . - . ID=gene4146;Name=YPZ3_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20775;old_locus_tag=YPZ3_3481 NC_014029.1 Protein Homology CDS 4477981 4478568 . - 0 ID=cds4052;Parent=gene4146;Dbxref=Genbank:WP_002231685.1;Name=WP_002231685.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002231685.1;transl_table=11 NC_014029.1 RefSeq gene 4478765 4479589 . + . ID=gene4147;Name=YPZ3_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20780;old_locus_tag=YPZ3_3482 NC_014029.1 Protein Homology CDS 4478765 4479589 . + 0 ID=cds4053;Parent=gene4147;Dbxref=Genbank:WP_002209612.1;Name=WP_002209612.1;gbkey=CDS;product=protein FdhD;protein_id=WP_002209612.1;transl_table=11 NC_014029.1 RefSeq gene 4480025 4480648 . + . ID=gene4148;Name=YPZ3_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20785;old_locus_tag=YPZ3_3483 NC_014029.1 Protein Homology CDS 4480025 4480648 . + 0 ID=cds4054;Parent=gene4148;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11 NC_014029.1 RefSeq gene 4480992 4482941 . + . ID=gene4149;Name=YPZ3_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20790;old_locus_tag=YPZ3_3484 NC_014029.1 Protein Homology CDS 4480992 4482941 . + 0 ID=cds4055;Parent=gene4149;Dbxref=Genbank:WP_002209615.1;Name=WP_002209615.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209615.1;transl_table=11 NC_014029.1 RefSeq gene 4483131 4483463 . + . ID=gene4150;Name=YPZ3_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20795;old_locus_tag=YPZ3_3485 NC_014029.1 Protein Homology CDS 4483131 4483463 . + 0 ID=cds4056;Parent=gene4150;Dbxref=Genbank:WP_002217114.1;Name=WP_002217114.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217114.1;transl_table=11 NC_014029.1 RefSeq gene 4483995 4484471 . + . ID=gene4151;Name=YPZ3_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20800;old_locus_tag=YPZ3_3486 NC_014029.1 Protein Homology CDS 4483995 4484471 . + 0 ID=cds4057;Parent=gene4151;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11 NC_014029.1 RefSeq gene 4484640 4484996 . - . ID=gene4152;Name=YPZ3_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20805;old_locus_tag=YPZ3_3487 NC_014029.1 Protein Homology CDS 4484640 4484996 . - 0 ID=cds4058;Parent=gene4152;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11 NC_014029.1 RefSeq gene 4485245 4485799 . - . ID=gene4153;Name=YPZ3_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20810;old_locus_tag=YPZ3_3488 NC_014029.1 Protein Homology CDS 4485245 4485799 . - 0 ID=cds4059;Parent=gene4153;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11 NC_014029.1 RefSeq gene 4486006 4487169 . - . ID=gene4154;Name=YPZ3_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20815;old_locus_tag=YPZ3_3489 NC_014029.1 Protein Homology CDS 4486006 4487169 . - 0 ID=cds4060;Parent=gene4154;Dbxref=Genbank:WP_002209620.1;Name=WP_002209620.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_002209620.1;transl_table=11 NC_014029.1 RefSeq gene 4487306 4489237 . - . ID=gene4155;Name=YPZ3_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20820;old_locus_tag=YPZ3_3490 NC_014029.1 Protein Homology CDS 4487306 4489237 . - 0 ID=cds4061;Parent=gene4155;Dbxref=Genbank:WP_002209621.1;Name=WP_002209621.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannitol transporter subunit IIABC;protein_id=WP_002209621.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4489679 4489853 . + . ID=id355;gbkey=repeat_region NC_014029.1 RefSeq gene 4489887 4490606 . - . ID=gene4156;Name=YPZ3_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20825;old_locus_tag=YPZ3_3491 NC_014029.1 Protein Homology CDS 4489887 4490606 . - 0 ID=cds4062;Parent=gene4156;Dbxref=Genbank:WP_002209622.1;Name=WP_002209622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209622.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4490858 4491032 . + . ID=id356;gbkey=repeat_region NC_014029.1 RefSeq gene 4491079 4493148 . - . ID=gene4157;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YPZ3_RS20830;old_locus_tag=YPZ3_3492 NC_014029.1 Protein Homology CDS 4491079 4493148 . - 0 ID=cds4063;Parent=gene4157;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NC_014029.1 RefSeq gene 4493158 4494072 . - . ID=gene4158;Name=YPZ3_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20835;old_locus_tag=YPZ3_3493 NC_014029.1 Protein Homology CDS 4493158 4494072 . - 0 ID=cds4064;Parent=gene4158;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NC_014029.1 RefSeq gene 4494400 4494972 . + . ID=gene4159;Name=YPZ3_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20840;old_locus_tag=YPZ3_3494 NC_014029.1 Protein Homology CDS 4494400 4494972 . + 0 ID=cds4065;Parent=gene4159;Dbxref=Genbank:WP_002209626.1;Name=WP_002209626.1;gbkey=CDS;product=DNA-3-methyladenine glycosylase;protein_id=WP_002209626.1;transl_table=11 NC_014029.1 RefSeq gene 4494969 4495424 . + . ID=gene4160;Name=YPZ3_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20845;old_locus_tag=YPZ3_3495 NC_014029.1 Protein Homology CDS 4494969 4495424 . + 0 ID=cds4066;Parent=gene4160;Dbxref=Genbank:WP_002209627.1;Name=WP_002209627.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209627.1;transl_table=11 NC_014029.1 RefSeq gene 4495782 4496441 . + . ID=gene4161;Name=YPZ3_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20850;old_locus_tag=YPZ3_3496 NC_014029.1 Protein Homology CDS 4495782 4496441 . + 0 ID=cds4067;Parent=gene4161;Dbxref=Genbank:WP_002209628.1;Name=WP_002209628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209628.1;transl_table=11 NC_014029.1 RefSeq gene 4496572 4497216 . - . ID=gene4162;Name=YPZ3_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20855;old_locus_tag=YPZ3_3497 NC_014029.1 Protein Homology CDS 4496572 4497216 . - 0 ID=cds4068;Parent=gene4162;Dbxref=Genbank:WP_002209629.1;Name=WP_002209629.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209629.1;transl_table=11 NC_014029.1 RefSeq gene 4497735 4498715 . + . ID=gene4163;Name=YPZ3_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20860;old_locus_tag=YPZ3_3498 NC_014029.1 Protein Homology CDS 4497735 4498715 . + 0 ID=cds4069;Parent=gene4163;Dbxref=Genbank:WP_002209630.1;Name=WP_002209630.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_002209630.1;transl_table=11 NC_014029.1 RefSeq gene 4499004 4501067 . + . ID=gene4164;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YPZ3_RS20865;old_locus_tag=YPZ3_3499 NC_014029.1 Protein Homology CDS 4499004 4501067 . + 0 ID=cds4070;Parent=gene4164;Dbxref=Genbank:WP_002209631.1;Name=WP_002209631.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_002209631.1;transl_table=11 NC_014029.1 RefSeq gene 4501482 4501925 . + . ID=gene4165;Name=YPZ3_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20870;old_locus_tag=YPZ3_3500 NC_014029.1 Protein Homology CDS 4501482 4501925 . + 0 ID=cds4071;Parent=gene4165;Dbxref=Genbank:WP_002209632.1;Name=WP_002209632.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209632.1;transl_table=11 NC_014029.1 RefSeq gene 4502380 4503645 . + . ID=gene4166;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YPZ3_RS20875;old_locus_tag=YPZ3_3501 NC_014029.1 Protein Homology CDS 4502380 4503645 . + 0 ID=cds4072;Parent=gene4166;Dbxref=Genbank:WP_002228155.1;Name=WP_002228155.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_002228155.1;transl_table=11 NC_014029.1 RefSeq gene 4503758 4505416 . - . ID=gene4167;Name=YPZ3_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20880;old_locus_tag=YPZ3_3502 NC_014029.1 Protein Homology CDS 4503758 4505416 . - 0 ID=cds4073;Parent=gene4167;Dbxref=Genbank:WP_002209634.1;Name=WP_002209634.1;gbkey=CDS;product=transporter;protein_id=WP_002209634.1;transl_table=11 NC_014029.1 RefSeq gene 4505789 4506253 . - . ID=gene4168;Name=YPZ3_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20885;old_locus_tag=YPZ3_3503 NC_014029.1 Protein Homology CDS 4505789 4506253 . - 0 ID=cds4074;Parent=gene4168;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11 NC_014029.1 RefSeq gene 4506534 4506947 . - . ID=gene4169;Name=YPZ3_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20890;old_locus_tag=YPZ3_3504 NC_014029.1 Protein Homology CDS 4506534 4506947 . - 0 ID=cds4075;Parent=gene4169;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11 NC_014029.1 RefSeq gene 4507315 4507653 . + . ID=gene4170;Name=YPZ3_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20895;old_locus_tag=YPZ3_3505 NC_014029.1 Protein Homology CDS 4507315 4507653 . + 0 ID=cds4076;Parent=gene4170;Dbxref=Genbank:WP_002209637.1;Name=WP_002209637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209637.1;transl_table=11 NC_014029.1 RefSeq gene 4507693 4508007 . - . ID=gene4171;Name=YPZ3_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20900;old_locus_tag=YPZ3_3506 NC_014029.1 Protein Homology CDS 4507693 4508007 . - 0 ID=cds4077;Parent=gene4171;Dbxref=Genbank:WP_002228733.1;Name=WP_002228733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228733.1;transl_table=11 NC_014029.1 RefSeq gene 4507997 4508308 . - . ID=gene4172;Name=YPZ3_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20905;old_locus_tag=YPZ3_3507 NC_014029.1 Protein Homology CDS 4507997 4508308 . - 0 ID=cds4078;Parent=gene4172;Dbxref=Genbank:WP_002228734.1;Name=WP_002228734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228734.1;transl_table=11 NC_014029.1 RefSeq gene 4508516 4509478 . + . ID=gene4173;Name=YPZ3_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20910;old_locus_tag=YPZ3_3508 NC_014029.1 Protein Homology CDS 4508516 4509478 . + 0 ID=cds4079;Parent=gene4173;Dbxref=Genbank:WP_002209638.1;Name=WP_002209638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209638.1;transl_table=11 NC_014029.1 RefSeq gene 4509472 4510425 . + . ID=gene4174;Name=YPZ3_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20915;old_locus_tag=YPZ3_3509 NC_014029.1 Protein Homology CDS 4509472 4510425 . + 0 ID=cds4080;Parent=gene4174;Dbxref=Genbank:WP_002209639.1;Name=WP_002209639.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_002209639.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4510464 4512260 . + . ID=id357;gbkey=repeat_region NC_014029.1 RefSeq gene 4510632 4511147 . + . ID=gene4175;Name=YPZ3_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20920 NC_014029.1 Protein Homology CDS 4510632 4511147 . + 0 ID=cds4081;Parent=gene4175;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_014029.1 RefSeq gene 4511201 4511986 . + . ID=gene4176;Name=YPZ3_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20925;old_locus_tag=YPZ3_3511 NC_014029.1 Protein Homology CDS 4511201 4511986 . + 0 ID=cds4082;Parent=gene4176;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_014029.1 RefSeq gene 4512377 4513186 . - . ID=gene4177;Name=YPZ3_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20930;old_locus_tag=YPZ3_3512 NC_014029.1 Protein Homology CDS 4512377 4513186 . - 0 ID=cds4083;Parent=gene4177;Dbxref=Genbank:WP_002209641.1;Name=WP_002209641.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_002209641.1;transl_table=11 NC_014029.1 RefSeq gene 4513402 4515816 . - . ID=gene4178;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YPZ3_RS20935;old_locus_tag=YPZ3_3513 NC_014029.1 Protein Homology CDS 4513402 4515816 . - 0 ID=cds4084;Parent=gene4178;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11 NC_014029.1 RefSeq gene 4515836 4516921 . - . ID=gene4179;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YPZ3_RS20940;old_locus_tag=YPZ3_3514 NC_014029.1 Protein Homology CDS 4515836 4516921 . - 0 ID=cds4085;Parent=gene4179;Dbxref=Genbank:WP_002209643.1;Name=WP_002209643.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_002209643.1;transl_table=11 NC_014029.1 RefSeq gene 4516920 4517090 . + . ID=gene4180;Name=YPZ3_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20945 NC_014029.1 Protein Homology CDS 4516920 4517090 . + 0 ID=cds4086;Parent=gene4180;Dbxref=Genbank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;product=recombinase F;protein_id=WP_002218418.1;transl_table=11 NC_014029.1 RefSeq gene 4517094 4518194 . - . ID=gene4181;Name=YPZ3_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20950;old_locus_tag=YPZ3_3515 NC_014029.1 Protein Homology CDS 4517094 4518194 . - 0 ID=cds4087;Parent=gene4181;Dbxref=Genbank:WP_002209645.1;Name=WP_002209645.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11 NC_014029.1 RefSeq gene 4518199 4519587 . - . ID=gene4182;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YPZ3_RS20955;old_locus_tag=YPZ3_3516 NC_014029.1 Protein Homology CDS 4518199 4519587 . - 0 ID=cds4088;Parent=gene4182;Dbxref=Genbank:WP_002220732.1;Name=WP_002220732.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 NC_014029.1 RefSeq gene 4520297 4520437 . + . ID=gene4183;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YPZ3_RS20960 NC_014029.1 Protein Homology CDS 4520297 4520437 . + 0 ID=cds4089;Parent=gene4183;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 NC_014029.1 RefSeq gene 4520456 4520815 . + . ID=gene4184;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YPZ3_RS20965 NC_014029.1 Protein Homology CDS 4520456 4520815 . + 0 ID=cds4090;Parent=gene4184;Dbxref=Genbank:WP_002228153.1;Name=WP_002228153.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NC_014029.1 RefSeq gene 4521039 4522679 . + . ID=gene4185;Name=YPZ3_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20970;old_locus_tag=YPZ3_3517 NC_014029.1 Protein Homology CDS 4521039 4522679 . + 0 ID=cds4091;Parent=gene4185;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11 NC_014029.1 RefSeq gene 4522822 4524186 . + . ID=gene4186;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=YPZ3_RS20975;old_locus_tag=YPZ3_3518 NC_014029.1 Protein Homology CDS 4522822 4524186 . + 0 ID=cds4092;Parent=gene4186;Dbxref=Genbank:WP_002220740.1;Name=WP_002220740.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_002220740.1;transl_table=11 NC_014029.1 RefSeq gene 4524372 4525571 . + . ID=gene4187;Name=YPZ3_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20980;old_locus_tag=YPZ3_3519 NC_014029.1 Protein Homology CDS 4524372 4525571 . + 0 ID=cds4093;Parent=gene4187;Dbxref=Genbank:WP_002215588.1;Name=WP_002215588.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_002215588.1;transl_table=11 NC_014029.1 RefSeq gene 4526039 4526320 . - . ID=gene4188;Name=YPZ3_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20985 NC_014029.1 Protein Homology CDS 4526039 4526320 . - 0 ID=cds4094;Parent=gene4188;Dbxref=Genbank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215583.1;transl_table=11 NC_014029.1 RefSeq gene 4526382 4527002 . - . ID=gene4189;Name=YPZ3_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20990;old_locus_tag=YPZ3_3520 NC_014029.1 Protein Homology CDS 4526382 4527002 . - 0 ID=cds4095;Parent=gene4189;Dbxref=Genbank:WP_002215581.1;Name=WP_002215581.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215581.1;transl_table=11 NC_014029.1 RefSeq gene 4527547 4528875 . - . ID=gene4190;Name=YPZ3_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS20995;old_locus_tag=YPZ3_3521 NC_014029.1 Protein Homology CDS 4527547 4528875 . - 0 ID=cds4096;Parent=gene4190;Dbxref=Genbank:WP_002215577.1;Name=WP_002215577.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_002215577.1;transl_table=11 NC_014029.1 RefSeq repeat_region 4529094 4529266 . + . ID=id358;gbkey=repeat_region NC_014029.1 RefSeq gene 4529368 4530036 . + . ID=gene4191;Name=YPZ3_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21000;old_locus_tag=YPZ3_3522 NC_014029.1 Protein Homology CDS 4529368 4530036 . + 0 ID=cds4097;Parent=gene4191;Dbxref=Genbank:WP_002215575.1;Name=WP_002215575.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_002215575.1;transl_table=11 NC_014029.1 RefSeq gene 4530071 4530826 . - . ID=gene4192;Name=YPZ3_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21005;old_locus_tag=YPZ3_3523 NC_014029.1 Protein Homology CDS 4530071 4530826 . - 0 ID=cds4098;Parent=gene4192;Dbxref=Genbank:WP_002215573.1;Name=WP_002215573.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215573.1;transl_table=11 NC_014029.1 RefSeq gene 4530828 4531565 . - . ID=gene4193;Name=YPZ3_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21010;old_locus_tag=YPZ3_3524 NC_014029.1 Protein Homology CDS 4530828 4531565 . - 0 ID=cds4099;Parent=gene4193;Dbxref=Genbank:WP_002215571.1;Name=WP_002215571.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215571.1;transl_table=11 NC_014029.1 RefSeq gene 4531748 4532602 . - . ID=gene4194;Name=YPZ3_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21015;old_locus_tag=YPZ3_3525 NC_014029.1 Protein Homology CDS 4531748 4532602 . - 0 ID=cds4100;Parent=gene4194;Dbxref=Genbank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11 NC_014029.1 RefSeq gene 4532822 4533493 . - . ID=gene4195;Name=YPZ3_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21020;old_locus_tag=YPZ3_3526 NC_014029.1 Protein Homology CDS 4532822 4533493 . - 0 ID=cds4101;Parent=gene4195;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11 NC_014029.1 RefSeq gene 4533789 4534511 . - . ID=gene4196;Name=YPZ3_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21025;old_locus_tag=YPZ3_3527 NC_014029.1 Protein Homology CDS 4533789 4534511 . - 0 ID=cds4102;Parent=gene4196;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11 NC_014029.1 RefSeq gene 4534599 4535375 . - . ID=gene4197;Name=YPZ3_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21030;old_locus_tag=YPZ3_3528 NC_014029.1 Protein Homology CDS 4534599 4535375 . - 0 ID=cds4103;Parent=gene4197;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11 NC_014029.1 RefSeq gene 4535456 4536343 . - . ID=gene4198;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPZ3_RS21035;old_locus_tag=YPZ3_3529 NC_014029.1 Protein Homology CDS 4535456 4536343 . - 0 ID=cds4104;Parent=gene4198;Dbxref=Genbank:WP_002215560.1;Name=WP_002215560.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_002215560.1;transl_table=11 NC_014029.1 RefSeq gene 4536345 4537301 . - . ID=gene4199;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YPZ3_RS21040;old_locus_tag=YPZ3_3530 NC_014029.1 Protein Homology CDS 4536345 4537301 . - 0 ID=cds4105;Parent=gene4199;Dbxref=Genbank:WP_002215558.1;Name=WP_002215558.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002215558.1;transl_table=11 NC_014029.1 RefSeq gene 4537530 4538570 . - . ID=gene4200;Name=YPZ3_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21045;old_locus_tag=YPZ3_3531 NC_014029.1 Protein Homology CDS 4537530 4538570 . - 0 ID=cds4106;Parent=gene4200;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11 NC_014029.1 RefSeq gene 4539053 4540882 . - . ID=gene4201;Name=YPZ3_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21050;old_locus_tag=YPZ3_3532 NC_014029.1 Protein Homology CDS 4539053 4540882 . - 0 ID=cds4107;Parent=gene4201;Dbxref=Genbank:WP_002215552.1;Name=WP_002215552.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_002215552.1;transl_table=11 NC_014029.1 RefSeq gene 4541083 4542453 . - . ID=gene4202;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YPZ3_RS21055;old_locus_tag=YPZ3_3533 NC_014029.1 Protein Homology CDS 4541083 4542453 . - 0 ID=cds4108;Parent=gene4202;Dbxref=Genbank:WP_002215550.1;Name=WP_002215550.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_002215550.1;transl_table=11 NC_014029.1 RefSeq gene 4543074 4543496 . - . ID=gene4203;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=YPZ3_RS21060;old_locus_tag=YPZ3_3534 NC_014029.1 Protein Homology CDS 4543074 4543496 . - 0 ID=cds4109;Parent=gene4203;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11 NC_014029.1 RefSeq gene 4543518 4544900 . - . ID=gene4204;Name=YPZ3_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21065;old_locus_tag=YPZ3_3535 NC_014029.1 Protein Homology CDS 4543518 4544900 . - 0 ID=cds4110;Parent=gene4204;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NC_014029.1 RefSeq gene 4545056 4545919 . - . ID=gene4205;Name=YPZ3_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21070;old_locus_tag=YPZ3_3536 NC_014029.1 Protein Homology CDS 4545056 4545919 . - 0 ID=cds4111;Parent=gene4205;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NC_014029.1 RefSeq gene 4545981 4547522 . - . ID=gene4206;Name=YPZ3_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21075;old_locus_tag=YPZ3_3537 NC_014029.1 Protein Homology CDS 4545981 4547522 . - 0 ID=cds4112;Parent=gene4206;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NC_014029.1 RefSeq gene 4547537 4548070 . - . ID=gene4207;Name=YPZ3_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21080;old_locus_tag=YPZ3_3538 NC_014029.1 Protein Homology CDS 4547537 4548070 . - 0 ID=cds4113;Parent=gene4207;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NC_014029.1 RefSeq gene 4548085 4548555 . - . ID=gene4208;Name=YPZ3_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21085;old_locus_tag=YPZ3_3539 NC_014029.1 Protein Homology CDS 4548085 4548555 . - 0 ID=cds4114;Parent=gene4208;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11 NC_014029.1 RefSeq gene 4548617 4548856 . - . ID=gene4209;Name=YPZ3_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21090 NC_014029.1 Protein Homology CDS 4548617 4548856 . - 0 ID=cds4115;Parent=gene4209;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NC_014029.1 RefSeq gene 4548906 4549730 . - . ID=gene4210;Name=YPZ3_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21095;old_locus_tag=YPZ3_3540 NC_014029.1 Protein Homology CDS 4548906 4549730 . - 0 ID=cds4116;Parent=gene4210;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11 NC_014029.1 RefSeq gene 4549770 4550153 . - . ID=gene4211;Name=YPZ3_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21100;old_locus_tag=YPZ3_3541 NC_014029.1 Protein Homology CDS 4549770 4550153 . - 0 ID=cds4117;Parent=gene4211;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NC_014029.1 RefSeq gene 4550820 4551440 . - . ID=gene4212;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YPZ3_RS21105;old_locus_tag=YPZ3_3542 NC_014029.1 Protein Homology CDS 4550820 4551440 . - 0 ID=cds4118;Parent=gene4212;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11 NC_014029.1 RefSeq gene 4551586 4553475 . - . ID=gene4213;Name=YPZ3_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21110;old_locus_tag=YPZ3_3543 NC_014029.1 Protein Homology CDS 4551586 4553475 . - 0 ID=cds4119;Parent=gene4213;Dbxref=Genbank:WP_002212259.1;Name=WP_002212259.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 ##sequence-region NC_014017.1 1 68342 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637386 NC_014017.1 RefSeq region 1 68342 . + . ID=id359;Dbxref=taxon:637386;Is_circular=true;Name=pCD1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pCD1;strain=Z176003 NC_014017.1 RefSeq gene 67415 68587 . - . ID=gene4214;Name=YPZ3_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21555 NC_014017.1 Protein Homology CDS 67415 68587 . - 0 ID=cds4120;Parent=gene4214;Dbxref=Genbank:WP_002220893.1;Name=WP_002220893.1;gbkey=CDS;product=integrase;protein_id=WP_002220893.1;transl_table=11 NC_014017.1 RefSeq gene 495 992 . + . ID=gene4215;Name=YPZ3_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21130;old_locus_tag=YPZ3_pCD0001 NC_014017.1 Protein Homology CDS 495 992 . + 0 ID=cds4121;Parent=gene4215;Dbxref=Genbank:WP_002428538.1;Name=WP_002428538.1;gbkey=CDS;product=transposase;protein_id=WP_002428538.1;transl_table=11 NC_014017.1 RefSeq gene 1055 1447 . - . ID=gene4216;Name=YPZ3_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21135;old_locus_tag=YPZ3_pCD0002 NC_014017.1 Protein Homology CDS 1055 1447 . - 0 ID=cds4122;Parent=gene4216;Dbxref=Genbank:WP_002213403.1;Name=WP_002213403.1;gbkey=CDS;product=YopE regulator;protein_id=WP_002213403.1;transl_table=11 NC_014017.1 RefSeq gene 1716 2300 . + . ID=gene4217;Name=YPZ3_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21140;old_locus_tag=YPZ3_pCD0003 NC_014017.1 Protein Homology CDS 1716 2300 . + 0 ID=cds4123;Parent=gene4217;Dbxref=Genbank:WP_002353311.1;Name=WP_002353311.1;gbkey=CDS;product=virulence protein YopE;protein_id=WP_002353311.1;transl_table=11 NC_014017.1 RefSeq gene 2440 2739 . - . ID=gene4218;Name=YPZ3_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21145 NC_014017.1 Protein Homology CDS 2440 2739 . - 0 ID=cds4124;Parent=gene4218;Dbxref=Genbank:WP_002213360.1;Name=WP_002213360.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002213360.1;transl_table=11 NC_014017.1 RefSeq gene 2732 2974 . - . ID=gene4219;Name=YPZ3_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21150 NC_014017.1 Protein Homology CDS 2732 2974 . - 0 ID=cds4125;Parent=gene4219;Dbxref=Genbank:WP_002224342.1;Name=WP_002224342.1;gbkey=CDS;product=antitoxin ParD;protein_id=WP_002224342.1;transl_table=11 NC_014017.1 RefSeq gene 3821 4069 . - . ID=gene4220;Name=YPZ3_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21155 NC_014017.1 Protein Homology CDS 3821 4069 . - 0 ID=cds4126;Parent=gene4220;Dbxref=Genbank:WP_017204796.1;Name=WP_017204796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_017204796.1;transl_table=11 NC_014017.1 RefSeq repeat_region 3876 4109 . + . ID=id360;gbkey=repeat_region NC_014017.1 RefSeq gene 4237 5202 . - . ID=gene4221;Name=YPZ3_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21160;old_locus_tag=YPZ3_pCD0005 NC_014017.1 Protein Homology CDS 4237 5202 . - 0 ID=cds4127;Parent=gene4221;Dbxref=Genbank:WP_002213354.1;Name=WP_002213354.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002213354.1;transl_table=11 NC_014017.1 RefSeq gene 5199 6365 . - . ID=gene4222;Name=YPZ3_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21165;old_locus_tag=YPZ3_pCD0006 NC_014017.1 Protein Homology CDS 5199 6365 . - 0 ID=cds4128;Parent=gene4222;Dbxref=Genbank:WP_002220902.1;Name=WP_002220902.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002220902.1;transl_table=11 NC_014017.1 RefSeq repeat_region 7108 8342 . + . ID=id361;gbkey=repeat_region NC_014017.1 RefSeq gene 7165 7359 . - . ID=gene4223;Name=YPZ3_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21170 NC_014017.1 Protein Homology CDS 7165 7359 . - 0 ID=cds4129;Parent=gene4223;Dbxref=Genbank:WP_002229766.1;Name=WP_002229766.1;gbkey=CDS;product=transposase;protein_id=WP_002229766.1;transl_table=11 NC_014017.1 RefSeq gene 7471 7929 . - . ID=gene4224;Name=YPZ3_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21175;old_locus_tag=YPZ3_pCD0007 NC_014017.1 Protein Homology CDS 7471 7929 . - 0 ID=cds4130;Parent=gene4224;Dbxref=Genbank:WP_002229768.1;Name=WP_002229768.1;gbkey=CDS;product=transposase;protein_id=WP_002229768.1;transl_table=11 NC_014017.1 RefSeq gene 7953 8270 . - . ID=gene4225;Name=YPZ3_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21180;old_locus_tag=YPZ3_pCD0008 NC_014017.1 Protein Homology CDS 7953 8270 . - 0 ID=cds4131;Parent=gene4225;Dbxref=Genbank:WP_002213008.1;Name=WP_002213008.1;gbkey=CDS;product=transposase;protein_id=WP_002213008.1;transl_table=11 NC_014017.1 RefSeq gene 8377 8994 . - . ID=gene4226;Name=YPZ3_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21185;old_locus_tag=YPZ3_pCD0009 NC_014017.1 Protein Homology CDS 8377 8994 . - 0 ID=cds4132;Parent=gene4226;Dbxref=Genbank:WP_002353315.1;Name=WP_002353315.1;gbkey=CDS;product=conjugal transfer protein TraT;protein_id=WP_002353315.1;transl_table=11 NC_014017.1 RefSeq repeat_region 9301 9446 . + . ID=id362;gbkey=repeat_region NC_014017.1 RefSeq gene 9604 10152 . - . ID=gene4227;Name=YPZ3_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21190;old_locus_tag=YPZ3_pCD0010 NC_014017.1 Protein Homology CDS 9604 10152 . - 0 ID=cds4133;Parent=gene4227;Dbxref=Genbank:WP_002213007.1;Name=WP_002213007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213007.1;transl_table=11 NC_014017.1 RefSeq gene 10652 11620 . + . ID=gene4228;Name=YPZ3_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21195;old_locus_tag=YPZ3_pCD0011 NC_014017.1 Protein Homology CDS 10652 11620 . + 0 ID=cds4134;Parent=gene4228;Dbxref=Genbank:WP_002213006.1;Name=WP_002213006.1;gbkey=CDS;product=cysteine protease;protein_id=WP_002213006.1;transl_table=11 NC_014017.1 RefSeq gene 11620 12018 . + . ID=gene4229;Name=YPZ3_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21200;old_locus_tag=YPZ3_pCD0012 NC_014017.1 Protein Homology CDS 11620 12018 . + 0 ID=cds4135;Parent=gene4229;Dbxref=Genbank:WP_002213004.1;Name=WP_002213004.1;gbkey=CDS;product=chaperone protein SycT;protein_id=WP_002213004.1;transl_table=11 NC_014017.1 RefSeq gene 12062 12373 . - . ID=gene4230;Name=YPZ3_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21205;old_locus_tag=YPZ3_pCD0013 NC_014017.1 Protein Homology CDS 12062 12373 . - 0 ID=cds4136;Parent=gene4230;Dbxref=Genbank:WP_002233188.1;Name=WP_002233188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233188.1;transl_table=11 NC_014017.1 RefSeq repeat_region 12421 12760 . + . ID=id363;gbkey=repeat_region NC_014017.1 RefSeq gene 12723 13142 . + . ID=gene4231;Name=YPZ3_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21210;old_locus_tag=YPZ3_pCD0014 NC_014017.1 Protein Homology CDS 12723 13142 . + 0 ID=cds4137;Parent=gene4231;Dbxref=Genbank:WP_002222515.1;Name=WP_002222515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222515.1;transl_table=11 NC_014017.1 RefSeq repeat_region 13616 13889 . + . ID=id364;gbkey=repeat_region NC_014017.1 RefSeq gene 14120 14335 . + . ID=gene4232;Name=YPZ3_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21215 NC_014017.1 Protein Homology CDS 14120 14335 . + 0 ID=cds4138;Parent=gene4232;Dbxref=Genbank:WP_002353323.1;Name=WP_002353323.1;gbkey=CDS;product=transposase;protein_id=WP_002353323.1;transl_table=11 NC_014017.1 RefSeq gene 14378 15607 . - . ID=gene4233;Name=YPZ3_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21220;old_locus_tag=YPZ3_pCD0015 NC_014017.1 Protein Homology CDS 14378 15607 . - 0 ID=cds4139;Parent=gene4233;Dbxref=Genbank:WP_002229779.1;Name=WP_002229779.1;gbkey=CDS;product=outer membrane protein YopM;protein_id=WP_002229779.1;transl_table=11 NC_014017.1 RefSeq gene 16001 16210 . - . ID=gene4234;Name=YPZ3_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21225 NC_014017.1 Protein Homology CDS 16001 16210 . - 0 ID=cds4140;Parent=gene4234;Dbxref=Genbank:WP_002229781.1;Name=WP_002229781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229781.1;transl_table=11 NC_014017.1 RefSeq repeat_region 16644 16958 . + . ID=id365;gbkey=repeat_region NC_014017.1 RefSeq gene 17336 18256 . - . ID=gene4235;Name=YPZ3_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21230;old_locus_tag=YPZ3_pCD0017 NC_014017.1 Protein Homology CDS 17336 18256 . - 0 ID=cds4141;Parent=gene4235;Dbxref=Genbank:WP_002212987.1;Name=WP_002212987.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212987.1;transl_table=11 NC_014017.1 RefSeq gene 18275 19480 . - . ID=gene4236;Name=YPZ3_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21235;old_locus_tag=YPZ3_pCD0018 NC_014017.1 Protein Homology CDS 18275 19480 . - 0 ID=cds4142;Parent=gene4236;Dbxref=Genbank:WP_002212985.1;Name=WP_002212985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212985.1;transl_table=11 NC_014017.1 RefSeq gene 19458 19964 . - . ID=gene4237;Name=YPZ3_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21240;old_locus_tag=YPZ3_pCD0019 NC_014017.1 Protein Homology CDS 19458 19964 . - 0 ID=cds4143;Parent=gene4237;Dbxref=Genbank:WP_002222758.1;Name=WP_002222758.1;gbkey=CDS;product=low calcium response locus protein H;protein_id=WP_002222758.1;transl_table=11 NC_014017.1 RefSeq gene 19977 20957 . - . ID=gene4238;Name=YPZ3_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21245;old_locus_tag=YPZ3_pCD0020 NC_014017.1 Protein Homology CDS 19977 20957 . - 0 ID=cds4144;Parent=gene4238;Dbxref=Genbank:WP_002212981.1;Name=WP_002212981.1;gbkey=CDS;product=Virulence-associated V antigen;protein_id=WP_002212981.1;transl_table=11 NC_014017.1 RefSeq gene 20959 21246 . - . ID=gene4239;Name=YPZ3_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21250 NC_014017.1 Protein Homology CDS 20959 21246 . - 0 ID=cds4145;Parent=gene4239;Dbxref=Genbank:WP_002212973.1;Name=WP_002212973.1;gbkey=CDS;product=low calcium response locus protein G;protein_id=WP_002212973.1;transl_table=11 NC_014017.1 RefSeq gene 21288 21728 . - . ID=gene4240;Name=YPZ3_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21255;old_locus_tag=YPZ3_pCD0021 NC_014017.1 Protein Homology CDS 21288 21728 . - 0 ID=cds4146;Parent=gene4240;Dbxref=Genbank:WP_002220918.1;Name=WP_002220918.1;gbkey=CDS;product=low calcium response locus protein R;protein_id=WP_002220918.1;transl_table=11 NC_014017.1 RefSeq gene 21725 23839 . - . ID=gene4241;Name=YPZ3_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21260;old_locus_tag=YPZ3_pCD0022 NC_014017.1 Protein Homology CDS 21725 23839 . - 0 ID=cds4147;Parent=gene4241;Dbxref=Genbank:WP_002212971.1;Name=WP_002212971.1;gbkey=CDS;product=low calcium response locus protein D;protein_id=WP_002212971.1;transl_table=11 NC_014017.1 RefSeq gene 23826 24164 . - . ID=gene4242;Name=YPZ3_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21265;old_locus_tag=YPZ3_pCD0023 NC_014017.1 Protein Homology CDS 23826 24164 . - 0 ID=cds4148;Parent=gene4242;Dbxref=Genbank:WP_032465674.1;Name=WP_032465674.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_032465674.1;transl_table=11 NC_014017.1 RefSeq gene 24167 24535 . - . ID=gene4243;Name=YPZ3_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21270;old_locus_tag=YPZ3_pCD0024 NC_014017.1 Protein Homology CDS 24167 24535 . - 0 ID=cds4149;Parent=gene4243;Dbxref=Genbank:WP_002212969.1;Name=WP_002212969.1;gbkey=CDS;product=translocation protein YopX;protein_id=WP_002212969.1;transl_table=11 NC_014017.1 RefSeq gene 24532 24903 . - . ID=gene4244;Name=YPZ3_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21275;old_locus_tag=YPZ3_pCD0025 NC_014017.1 Protein Homology CDS 24532 24903 . - 0 ID=cds4150;Parent=gene4244;Dbxref=Genbank:WP_002229794.1;Name=WP_002229794.1;gbkey=CDS;product=chaperone protein SycN;protein_id=WP_002229794.1;transl_table=11 NC_014017.1 RefSeq gene 24890 25168 . - . ID=gene4245;Name=YPZ3_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21280 NC_014017.1 Protein Homology CDS 24890 25168 . - 0 ID=cds4151;Parent=gene4245;Dbxref=Genbank:WP_002212965.1;Name=WP_002212965.1;gbkey=CDS;product=protein TyeA;protein_id=WP_002212965.1;transl_table=11 NC_014017.1 RefSeq gene 25149 26030 . - . ID=gene4246;Name=YPZ3_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21285;old_locus_tag=YPZ3_pCD0026 NC_014017.1 Protein Homology CDS 25149 26030 . - 0 ID=cds4152;Parent=gene4246;Dbxref=Genbank:WP_002212958.1;Name=WP_002212958.1;gbkey=CDS;product=outer membrane protein YopN;protein_id=WP_002212958.1;transl_table=11 NC_014017.1 RefSeq gene 26228 27547 . + . ID=gene4247;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPZ3_RS21290;old_locus_tag=YPZ3_pCD0027 NC_014017.1 Protein Homology CDS 26228 27547 . + 0 ID=cds4153;Parent=gene4247;Dbxref=Genbank:WP_002212955.1;Name=WP_002212955.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_002212955.1;transl_table=11 NC_014017.1 RefSeq gene 27544 28008 . + . ID=gene4248;Name=YPZ3_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21295;old_locus_tag=YPZ3_pCD0028 NC_014017.1 Protein Homology CDS 27544 28008 . + 0 ID=cds4154;Parent=gene4248;Dbxref=Genbank:WP_002212952.1;Name=WP_002212952.1;gbkey=CDS;product=translocation protein YopO;protein_id=WP_002212952.1;transl_table=11 NC_014017.1 RefSeq gene 28008 29375 . + . ID=gene4249;Name=YPZ3_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21300;old_locus_tag=YPZ3_pCD0029 NC_014017.1 Protein Homology CDS 28008 29375 . + 0 ID=cds4155;Parent=gene4249;Dbxref=Genbank:WP_002212950.1;Name=WP_002212950.1;gbkey=CDS;product=translocation protein YopP;protein_id=WP_002212950.1;transl_table=11 NC_014017.1 RefSeq gene 29372 30295 . + . ID=gene4250;Name=YPZ3_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21305;old_locus_tag=YPZ3_pCD0030 NC_014017.1 Protein Homology CDS 29372 30295 . + 0 ID=cds4156;Parent=gene4250;Dbxref=Genbank:WP_002212948.1;Name=WP_002212948.1;gbkey=CDS;product=translocation protein YopQ;protein_id=WP_002212948.1;transl_table=11 NC_014017.1 RefSeq gene 30292 30945 . + . ID=gene4251;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPZ3_RS21310;old_locus_tag=YPZ3_pCD0031 NC_014017.1 Protein Homology CDS 30292 30945 . + 0 ID=cds4157;Parent=gene4251;Dbxref=Genbank:WP_002212947.1;Name=WP_002212947.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=translocation protein YopR;protein_id=WP_002212947.1;transl_table=11 NC_014017.1 RefSeq gene 30947 31213 . + . ID=gene4252;Name=YPZ3_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21315 NC_014017.1 Protein Homology CDS 30947 31213 . + 0 ID=cds4158;Parent=gene4252;Dbxref=Genbank:WP_002212945.1;Name=WP_002212945.1;gbkey=CDS;product=translocation protein YopS;protein_id=WP_002212945.1;transl_table=11 NC_014017.1 RefSeq gene 31210 31995 . + . ID=gene4253;Name=YPZ3_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21320;old_locus_tag=YPZ3_pCD0032 NC_014017.1 Protein Homology CDS 31210 31995 . + 0 ID=cds4159;Parent=gene4253;Dbxref=Genbank:WP_002212938.1;Name=WP_002212938.1;gbkey=CDS;product=translocation protein YopT;protein_id=WP_002212938.1;transl_table=11 NC_014017.1 RefSeq gene 31995 33059 . + . ID=gene4254;Name=YPZ3_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21325;old_locus_tag=YPZ3_pCD0033 NC_014017.1 Protein Homology CDS 31995 33059 . + 0 ID=cds4160;Parent=gene4254;Dbxref=Genbank:WP_002212936.1;Name=WP_002212936.1;gbkey=CDS;product=translocation protein YopU;protein_id=WP_002212936.1;transl_table=11 NC_014017.1 RefSeq gene 33635 34030 . + . ID=gene4255;Name=YPZ3_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21330;old_locus_tag=YPZ3_pCD0034 NC_014017.1 Protein Homology CDS 33635 34030 . + 0 ID=cds4161;Parent=gene4255;Dbxref=Genbank:WP_002222527.1;Name=WP_002222527.1;gbkey=CDS;product=type III secretion system chaperone VirG;protein_id=WP_002222527.1;transl_table=11 NC_014017.1 RefSeq gene 34154 34969 . + . ID=gene4256;Name=YPZ3_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21335;old_locus_tag=YPZ3_pCD0035 NC_014017.1 Protein Homology CDS 34154 34969 . + 0 ID=cds4162;Parent=gene4256;Dbxref=Genbank:WP_002212931.1;Name=WP_002212931.1;gbkey=CDS;product=thermoregulatory protein LcrF;protein_id=WP_002212931.1;transl_table=11 NC_014017.1 RefSeq gene 35048 35146 . + . ID=gene4257;Name=YPZ3_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21340 NC_014017.1 Protein Homology CDS 35048 35146 . + 0 ID=cds4163;Parent=gene4257;Dbxref=Genbank:WP_002229797.1;Name=WP_002229797.1;gbkey=CDS;product=translocation protein YopA;protein_id=WP_002229797.1;transl_table=11 NC_014017.1 RefSeq gene 35372 35785 . + . ID=gene4258;Name=YPZ3_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21345;old_locus_tag=YPZ3_pCD0036 NC_014017.1 Protein Homology CDS 35372 35785 . + 0 ID=cds4164;Parent=gene4258;Dbxref=Genbank:WP_002212925.1;Name=WP_002212925.1;gbkey=CDS;product=chaperone protein YscB;protein_id=WP_002212925.1;transl_table=11 NC_014017.1 RefSeq gene 35791 37614 . + . ID=gene4259;Name=YPZ3_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21350;old_locus_tag=YPZ3_pCD0037 NC_014017.1 Protein Homology CDS 35791 37614 . + 0 ID=cds4165;Parent=gene4259;Dbxref=Genbank:WP_002212923.1;Name=WP_002212923.1;gbkey=CDS;product=secretin;protein_id=WP_002212923.1;transl_table=11 NC_014017.1 RefSeq gene 37611 38870 . + . ID=gene4260;Name=YPZ3_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21355 NC_014017.1 Protein Homology CDS 37611 38870 . + 0 ID=cds4166;Parent=gene4260;Dbxref=Genbank:WP_002212919.1;Name=WP_002212919.1;gbkey=CDS;product=preprotein translocase D;protein_id=WP_002212919.1;transl_table=11 NC_014017.1 RefSeq gene 38867 39067 . + . ID=gene4261;Name=YPZ3_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21360 NC_014017.1 Protein Homology CDS 38867 39067 . + 0 ID=cds4167;Parent=gene4261;Dbxref=Genbank:WP_002212917.1;Name=WP_002212917.1;gbkey=CDS;product=preprotein translocase SecE;protein_id=WP_002212917.1;transl_table=11 NC_014017.1 RefSeq gene 39068 39331 . + . ID=gene4262;Name=YPZ3_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21365 NC_014017.1 Protein Homology CDS 39068 39331 . + 0 ID=cds4168;Parent=gene4262;Dbxref=Genbank:WP_002212916.1;Name=WP_002212916.1;gbkey=CDS;product=type III export protein pscF;protein_id=WP_002212916.1;transl_table=11 NC_014017.1 RefSeq gene 39333 39680 . + . ID=gene4263;Name=YPZ3_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21370;old_locus_tag=YPZ3_pCD0040 NC_014017.1 Protein Homology CDS 39333 39680 . + 0 ID=cds4169;Parent=gene4263;Dbxref=Genbank:WP_002229801.1;Name=WP_002229801.1;gbkey=CDS;product=preprotein translocase G;protein_id=WP_002229801.1;transl_table=11 NC_014017.1 RefSeq gene 39677 40174 . + . ID=gene4264;Name=YPZ3_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21375;old_locus_tag=YPZ3_pCD0041 NC_014017.1 Protein Homology CDS 39677 40174 . + 0 ID=cds4170;Parent=gene4264;Dbxref=Genbank:WP_002212915.1;Name=WP_002212915.1;gbkey=CDS;product=translocation protein YopH;protein_id=WP_002212915.1;transl_table=11 NC_014017.1 RefSeq gene 40184 40522 . + . ID=gene4265;Name=YPZ3_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21380;old_locus_tag=YPZ3_pCD0042 NC_014017.1 Protein Homology CDS 40184 40522 . + 0 ID=cds4171;Parent=gene4265;Dbxref=Genbank:WP_032465675.1;Name=WP_032465675.1;gbkey=CDS;product=preprotein translocase I;protein_id=WP_032465675.1;transl_table=11 NC_014017.1 RefSeq gene 40529 41263 . + . ID=gene4266;Name=YPZ3_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21385;old_locus_tag=YPZ3_pCD0043 NC_014017.1 Protein Homology CDS 40529 41263 . + 0 ID=cds4172;Parent=gene4266;Dbxref=Genbank:WP_002212912.1;Name=WP_002212912.1;gbkey=CDS;product=translocation protein YopJ;protein_id=WP_002212912.1;transl_table=11 NC_014017.1 RefSeq gene 41266 41892 . + . ID=gene4267;Name=YPZ3_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21390;old_locus_tag=YPZ3_pCD0044 NC_014017.1 Protein Homology CDS 41266 41892 . + 0 ID=cds4173;Parent=gene4267;Dbxref=Genbank:WP_002212911.1;Name=WP_002212911.1;gbkey=CDS;product=preprotein translocase K;protein_id=WP_002212911.1;transl_table=11 NC_014017.1 RefSeq gene 41871 42503 . + . ID=gene4268;Name=YPZ3_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21395;old_locus_tag=YPZ3_pCD0045 NC_014017.1 Protein Homology CDS 41871 42503 . + 0 ID=cds4174;Parent=gene4268;Dbxref=Genbank:WP_002212909.1;Name=WP_002212909.1;gbkey=CDS;product=type III secretion system protein;protein_id=WP_002212909.1;transl_table=11 NC_014017.1 RefSeq gene 42728 43075 . + . ID=gene4269;Name=YPZ3_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21400;old_locus_tag=YPZ3_pCD0046 NC_014017.1 Protein Homology CDS 42728 43075 . + 0 ID=cds4175;Parent=gene4269;Dbxref=Genbank:WP_002212907.1;Name=WP_002212907.1;gbkey=CDS;product=translocation protein YopM;protein_id=WP_002212907.1;transl_table=11 NC_014017.1 RefSeq gene 43623 43889 . + . ID=gene4270;Name=YPZ3_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21405 NC_014017.1 Protein Homology CDS 43623 43889 . + 0 ID=cds4176;Parent=gene4270;Dbxref=Genbank:WP_002212900.1;Name=WP_002212900.1;gbkey=CDS;product=low calcium response locus protein S;protein_id=WP_002212900.1;transl_table=11 NC_014017.1 RefSeq gene 43925 44347 . + . ID=gene4271;Name=YPZ3_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21410;old_locus_tag=YPZ3_pCD0047 NC_014017.1 Protein Homology CDS 43925 44347 . + 0 ID=cds4177;Parent=gene4271;Dbxref=Genbank:WP_002229803.1;Name=WP_002229803.1;gbkey=CDS;product=low calcium response locus protein T;protein_id=WP_002229803.1;transl_table=11 NC_014017.1 RefSeq gene 44365 44652 . + . ID=gene4272;Name=YPZ3_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21415;old_locus_tag=YPZ3_pCD0048 NC_014017.1 Protein Homology CDS 44365 44652 . + 0 ID=cds4178;Parent=gene4272;Dbxref=Genbank:WP_002356326.1;Name=WP_002356326.1;gbkey=CDS;product=integrase;protein_id=WP_002356326.1;transl_table=11 NC_014017.1 RefSeq gene 45164 46570 . - . ID=gene4273;Name=YPZ3_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21420;old_locus_tag=YPZ3_pCD0049 NC_014017.1 Protein Homology CDS 45164 46570 . - 0 ID=cds4179;Parent=gene4273;Dbxref=Genbank:WP_002213278.1;Name=WP_002213278.1;gbkey=CDS;product=tyrosine-protein phosphatase YopH;protein_id=WP_002213278.1;transl_table=11 NC_014017.1 RefSeq gene 46853 47059 . - . ID=gene4274;Name=YPZ3_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21425 NC_014017.1 Protein Homology CDS 46853 47059 . - 0 ID=cds4180;Parent=gene4274;Dbxref=Genbank:WP_002213282.1;Name=WP_002213282.1;gbkey=CDS;product=transposase;protein_id=WP_002213282.1;transl_table=11 NC_014017.1 RefSeq repeat_region 47088 47699 . + . ID=id366;gbkey=repeat_region NC_014017.1 RefSeq gene 47191 47667 . + . ID=gene4275;Name=YPZ3_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21430;old_locus_tag=YPZ3_pCD0050 NC_014017.1 Protein Homology CDS 47191 47667 . + 0 ID=cds4181;Parent=gene4275;Dbxref=Genbank:WP_002213284.1;Name=WP_002213284.1;gbkey=CDS;product=integrase;protein_id=WP_002213284.1;transl_table=11 NC_014017.1 RefSeq gene 48253 49119 . - . ID=gene4276;Name=YPZ3_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21435;old_locus_tag=YPZ3_pCD0051 NC_014017.1 Protein Homology CDS 48253 49119 . - 0 ID=cds4182;Parent=gene4276;Dbxref=Genbank:WP_002213287.1;Name=WP_002213287.1;gbkey=CDS;product=effector protein YopJ;protein_id=WP_002213287.1;transl_table=11 NC_014017.1 RefSeq gene 49515 51713 . - . ID=gene4277;Name=YPZ3_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21440;old_locus_tag=YPZ3_pCD0052 NC_014017.1 Protein Homology CDS 49515 51713 . - 0 ID=cds4183;Parent=gene4277;Dbxref=Genbank:WP_002213290.1;Name=WP_002213290.1;gbkey=CDS;product=protein kinase YpkA;protein_id=WP_002213290.1;transl_table=11 NC_014017.1 RefSeq gene 51721 52170 . - . ID=gene4278;Name=YPZ3_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21445;old_locus_tag=YPZ3_pCD0053 NC_014017.1 Protein Homology CDS 51721 52170 . - 0 ID=cds4184;Parent=gene4278;Dbxref=Genbank:WP_002229809.1;Name=WP_002229809.1;gbkey=CDS;product=molecular chaperone Tir;protein_id=WP_002229809.1;transl_table=11 NC_014017.1 RefSeq repeat_region 52408 52741 . + . ID=id367;gbkey=repeat_region NC_014017.1 RefSeq gene 52466 52660 . - . ID=gene4279;Name=YPZ3_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21450 NC_014017.1 Protein Homology CDS 52466 52660 . - 0 ID=cds4185;Parent=gene4279;Dbxref=Genbank:WP_011191370.1;Name=WP_011191370.1;gbkey=CDS;product=transposase;protein_id=WP_011191370.1;transl_table=11 NC_014017.1 RefSeq gene 54328 55194 . - . ID=gene4280;Name=YPZ3_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21455;old_locus_tag=YPZ3_pCD0054 NC_014017.1 Protein Homology CDS 54328 55194 . - 0 ID=cds4186;Parent=gene4280;Dbxref=Genbank:WP_002225475.1;Name=WP_002225475.1;gbkey=CDS;product=replication protein;protein_id=WP_002225475.1;transl_table=11 NC_014017.1 RefSeq gene 55187 55261 . - . ID=gene4281;Name=YPZ3_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21460 NC_014017.1 Protein Homology CDS 55187 55261 . - 0 ID=cds4187;Parent=gene4281;Dbxref=Genbank:WP_002233140.1;Name=WP_002233140.1;Note=acts to regulate the expression of the plasmid replication protein RepA in the IncFII plasmid group;gbkey=CDS;product=RepA leader peptide Tap-containing protein;protein_id=WP_002233140.1;transl_table=11 NC_014017.1 RefSeq gene 55503 55757 . - . ID=gene4282;Name=YPZ3_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21465 NC_014017.1 Protein Homology CDS 55503 55757 . - 0 ID=cds4188;Parent=gene4282;Dbxref=Genbank:WP_002229817.1;Name=WP_002229817.1;gbkey=CDS;product=replication protein;protein_id=WP_002229817.1;transl_table=11 NC_014017.1 RefSeq gene 55895 56143 . - . ID=gene4283;Name=YPZ3_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21470 NC_014017.1 Protein Homology CDS 55895 56143 . - 0 ID=cds4189;Parent=gene4283;Dbxref=Genbank:WP_002233137.1;Name=WP_002233137.1;gbkey=CDS;product=phospholipase;protein_id=WP_002233137.1;transl_table=11 NC_014017.1 RefSeq repeat_region 56145 57381 . + . ID=id368;gbkey=repeat_region NC_014017.1 RefSeq gene 56560 56967 . - . ID=gene4284;Name=YPZ3_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21475;old_locus_tag=YPZ3_pCD0055 NC_014017.1 Protein Homology CDS 56560 56967 . - 0 ID=cds4190;Parent=gene4284;Dbxref=Genbank:WP_002213294.1;Name=WP_002213294.1;gbkey=CDS;product=transposase;protein_id=WP_002213294.1;transl_table=11 NC_014017.1 RefSeq gene 56991 57308 . - . ID=gene4285;Name=YPZ3_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21480;old_locus_tag=YPZ3_pCD0056 NC_014017.1 Protein Homology CDS 56991 57308 . - 0 ID=cds4191;Parent=gene4285;Dbxref=Genbank:WP_002213244.1;Name=WP_002213244.1;gbkey=CDS;product=transposase;protein_id=WP_002213244.1;transl_table=11 NC_014017.1 RefSeq gene 57480 57938 . - . ID=gene4286;Name=YPZ3_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21485;old_locus_tag=YPZ3_pCD0057 NC_014017.1 Protein Homology CDS 57480 57938 . - 0 ID=cds4192;Parent=gene4286;Dbxref=Genbank:WP_002213246.1;Name=WP_002213246.1;gbkey=CDS;product=DNA helicase TraI;protein_id=WP_002213246.1;transl_table=11 NC_014017.1 RefSeq repeat_region 57981 58375 . + . ID=id369;gbkey=repeat_region NC_014017.1 RefSeq gene 58007 58276 . + . ID=gene4287;Name=YPZ3_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21490 NC_014017.1 Protein Homology CDS 58007 58276 . + 0 ID=cds4193;Parent=gene4287;Dbxref=Genbank:WP_042469136.1;Name=WP_042469136.1;gbkey=CDS;product=transposase;protein_id=WP_042469136.1;transl_table=11 NC_014017.1 RefSeq gene 58273 58479 . - . ID=gene4288;Name=YPZ3_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21495 NC_014017.1 Protein Homology CDS 58273 58479 . - 0 ID=cds4194;Parent=gene4288;Dbxref=Genbank:WP_011557428.1;Name=WP_011557428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011557428.1;transl_table=11 NC_014017.1 RefSeq gene 58602 59177 . - . ID=gene4289;Name=YPZ3_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21500 NC_014017.1 Protein Homology CDS 58602 59177 . - 0 ID=cds4195;Parent=gene4289;Dbxref=Genbank:WP_002353282.1;Name=WP_002353282.1;gbkey=CDS;product=adhesin;protein_id=WP_002353282.1;transl_table=11 NC_014017.1 RefSeq gene 59654 59905 . - . ID=gene4290;Name=YPZ3_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21505 NC_014017.1 Protein Homology CDS 59654 59905 . - 0 ID=cds4196;Parent=gene4290;Dbxref=Genbank:WP_002356450.1;Name=WP_002356450.1;gbkey=CDS;product=adhesin;protein_id=WP_002356450.1;transl_table=11 NC_014017.1 RefSeq gene 60511 60891 . + . ID=gene4291;Name=YPZ3_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21510;old_locus_tag=YPZ3_pCD0059 NC_014017.1 Protein Homology CDS 60511 60891 . + 0 ID=cds4197;Parent=gene4291;Dbxref=Genbank:WP_002213254.1;Name=WP_002213254.1;gbkey=CDS;product=transposase;protein_id=WP_002213254.1;transl_table=11 NC_014017.1 RefSeq repeat_region 60588 60733 . + . ID=id370;gbkey=repeat_region NC_014017.1 RefSeq gene 60888 63203 . - . ID=gene4292;Name=YPZ3_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21515;old_locus_tag=YPZ3_pCD0060 NC_014017.1 Protein Homology CDS 60888 63203 . - 0 ID=cds4198;Parent=gene4292;Dbxref=Genbank:WP_002213256.1;Name=WP_002213256.1;gbkey=CDS;product=transposase;protein_id=WP_002213256.1;transl_table=11 NC_014017.1 RefSeq gene 63367 63918 . + . ID=gene4293;Name=YPZ3_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21520;old_locus_tag=YPZ3_pCD0061 NC_014017.1 Protein Homology CDS 63367 63918 . + 0 ID=cds4199;Parent=gene4293;Dbxref=Genbank:WP_002213258.1;Name=WP_002213258.1;gbkey=CDS;product=recombinase;protein_id=WP_002213258.1;transl_table=11 NC_014017.1 RefSeq gene 63937 64401 . + . ID=gene4294;Name=YPZ3_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21525;old_locus_tag=YPZ3_pCD0062 NC_014017.1 Protein Homology CDS 63937 64401 . + 0 ID=cds4200;Parent=gene4294;Dbxref=Genbank:WP_002224338.1;Name=WP_002224338.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224338.1;transl_table=11 NC_014017.1 RefSeq gene 64540 64869 . + . ID=gene4295;Name=YPZ3_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21530;old_locus_tag=YPZ3_pCD0063 NC_014017.1 Protein Homology CDS 64540 64869 . + 0 ID=cds4201;Parent=gene4295;Dbxref=Genbank:WP_002229829.1;Name=WP_002229829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229829.1;transl_table=11 NC_014017.1 RefSeq gene 64969 65235 . + . ID=gene4296;Name=YPZ3_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21535 NC_014017.1 Protein Homology CDS 64969 65235 . + 0 ID=cds4202;Parent=gene4296;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_014017.1 RefSeq gene 65241 66068 . + . ID=gene4297;Name=YPZ3_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21540;old_locus_tag=YPZ3_pCD0064 NC_014017.1 Protein Homology CDS 65241 66068 . + 0 ID=cds4203;Parent=gene4297;Dbxref=Genbank:WP_032465673.1;Name=WP_032465673.1;gbkey=CDS;product=transposase;protein_id=WP_032465673.1;transl_table=11 NC_014017.1 RefSeq repeat_region 65489 66100 . + . ID=id371;gbkey=repeat_region NC_014017.1 RefSeq gene 66216 66641 . - . ID=gene4298;Name=YPZ3_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21545;old_locus_tag=YPZ3_pCD0065 NC_014017.1 Protein Homology CDS 66216 66641 . - 0 ID=cds4204;Parent=gene4298;Dbxref=Genbank:WP_002213267.1;Name=WP_002213267.1;gbkey=CDS;product=yopH targeting protein;protein_id=WP_002213267.1;transl_table=11 NC_014017.1 RefSeq gene 67017 67415 . - . ID=gene4299;Name=YPZ3_RS21550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPZ3_RS21550;old_locus_tag=YPZ3_pCD0066;partial=true;pseudo=true;start_range=.,67017 NC_014017.1 Protein Homology CDS 67017 67415 . - 0 ID=cds4205;Parent=gene4299;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,67017;transl_table=11 ##sequence-region NC_014022.1 1 94251 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637386 NC_014022.1 RefSeq region 1 94251 . + . ID=id372;Dbxref=taxon:637386;Is_circular=true;Name=pMT1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pMT1;strain=Z176003 NC_014022.1 RefSeq gene 87 1109 . + . ID=gene4300;Name=YPZ3_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21560;old_locus_tag=YPZ3_pMT0001 NC_014022.1 Protein Homology CDS 87 1109 . + 0 ID=cds4206;Parent=gene4300;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014022.1 RefSeq gene 1109 1888 . + . ID=gene4301;Name=YPZ3_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21565;old_locus_tag=YPZ3_pMT0002 NC_014022.1 Protein Homology CDS 1109 1888 . + 0 ID=cds4207;Parent=gene4301;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014022.1 RefSeq gene 2022 2630 . - . ID=gene4302;Name=YPZ3_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21570;old_locus_tag=YPZ3_pMT0003 NC_014022.1 Protein Homology CDS 2022 2630 . - 0 ID=cds4208;Parent=gene4302;Dbxref=Genbank:WP_002211769.1;Name=WP_002211769.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211769.1;transl_table=11 NC_014022.1 RefSeq gene 2723 2935 . - . ID=gene4303;Name=YPZ3_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21575 NC_014022.1 Protein Homology CDS 2723 2935 . - 0 ID=cds4209;Parent=gene4303;Dbxref=Genbank:WP_002217458.1;Name=WP_002217458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217458.1;transl_table=11 NC_014022.1 RefSeq gene 2932 5820 . - . ID=gene4304;Name=YPZ3_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21580;old_locus_tag=YPZ3_pMT0004 NC_014022.1 Protein Homology CDS 2932 5820 . - 0 ID=cds4210;Parent=gene4304;Dbxref=Genbank:WP_002211770.1;Name=WP_002211770.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211770.1;transl_table=11 NC_014022.1 RefSeq gene 5901 6533 . - . ID=gene4305;Name=YPZ3_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21585;old_locus_tag=YPZ3_pMT0005 NC_014022.1 Protein Homology CDS 5901 6533 . - 0 ID=cds4211;Parent=gene4305;Dbxref=Genbank:WP_002214116.1;Name=WP_002214116.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214116.1;transl_table=11 NC_014022.1 RefSeq gene 6536 11167 . - . ID=gene4306;Name=YPZ3_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21590;old_locus_tag=YPZ3_pMT0006 NC_014022.1 Protein Homology CDS 6536 11167 . - 0 ID=cds4212;Parent=gene4306;Dbxref=Genbank:WP_002214118.1;Name=WP_002214118.1;gbkey=CDS;product=host specificity protein J;protein_id=WP_002214118.1;transl_table=11 NC_014022.1 RefSeq gene 11189 11776 . - . ID=gene4307;Name=YPZ3_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21595;old_locus_tag=YPZ3_pMT0007 NC_014022.1 Protein Homology CDS 11189 11776 . - 0 ID=cds4213;Parent=gene4307;Dbxref=Genbank:WP_002211773.1;Name=WP_002211773.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211773.1;transl_table=11 NC_014022.1 RefSeq gene 11764 12561 . - . ID=gene4308;Name=YPZ3_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21600;old_locus_tag=YPZ3_pMT0008 NC_014022.1 Protein Homology CDS 11764 12561 . - 0 ID=cds4214;Parent=gene4308;Dbxref=Genbank:WP_002211774.1;Name=WP_002211774.1;gbkey=CDS;product=tail protein;protein_id=WP_002211774.1;transl_table=11 NC_014022.1 RefSeq gene 12554 13252 . - . ID=gene4309;Name=YPZ3_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21605;old_locus_tag=YPZ3_pMT0009 NC_014022.1 Protein Homology CDS 12554 13252 . - 0 ID=cds4215;Parent=gene4309;Dbxref=Genbank:WP_002211775.1;Name=WP_002211775.1;gbkey=CDS;product=tail protein;protein_id=WP_002211775.1;transl_table=11 NC_014022.1 RefSeq gene 13342 13677 . - . ID=gene4310;Name=YPZ3_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21610;old_locus_tag=YPZ3_pMT0010 NC_014022.1 Protein Homology CDS 13342 13677 . - 0 ID=cds4216;Parent=gene4310;Dbxref=Genbank:WP_000440566.1;Name=WP_000440566.1;gbkey=CDS;product=tail protein;protein_id=WP_000440566.1;transl_table=11 NC_014022.1 RefSeq gene 13719 18296 . - . ID=gene4311;Name=YPZ3_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21615;old_locus_tag=YPZ3_pMT0011 NC_014022.1 Protein Homology CDS 13719 18296 . - 0 ID=cds4217;Parent=gene4311;Dbxref=Genbank:WP_002211776.1;Name=WP_002211776.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_002211776.1;transl_table=11 NC_014022.1 RefSeq gene 18304 18537 . - . ID=gene4312;Name=YPZ3_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21620 NC_014022.1 Protein Homology CDS 18304 18537 . - 0 ID=cds4218;Parent=gene4312;Dbxref=Genbank:WP_002211777.1;Name=WP_002211777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211777.1;transl_table=11 NC_014022.1 RefSeq gene 18654 18971 . - . ID=gene4313;Name=YPZ3_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21630;old_locus_tag=YPZ3_pMT0012 NC_014022.1 Protein Homology CDS 18654 18971 . - 0 ID=cds4219;Parent=gene4313;Dbxref=Genbank:WP_000163862.1;Name=WP_000163862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000163862.1;transl_table=11 NC_014022.1 RefSeq gene 19031 19777 . - . ID=gene4314;Name=YPZ3_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21635;old_locus_tag=YPZ3_pMT0013 NC_014022.1 Protein Homology CDS 19031 19777 . - 0 ID=cds4220;Parent=gene4314;Dbxref=Genbank:WP_002211778.1;Name=WP_002211778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211778.1;transl_table=11 NC_014022.1 RefSeq gene 19852 20235 . - . ID=gene4315;Name=YPZ3_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21640;old_locus_tag=YPZ3_pMT0014 NC_014022.1 Protein Homology CDS 19852 20235 . - 0 ID=cds4221;Parent=gene4315;Dbxref=Genbank:WP_002211779.1;Name=WP_002211779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211779.1;transl_table=11 NC_014022.1 RefSeq gene 20237 20710 . - . ID=gene4316;Name=YPZ3_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21645;old_locus_tag=YPZ3_pMT0015 NC_014022.1 Protein Homology CDS 20237 20710 . - 0 ID=cds4222;Parent=gene4316;Dbxref=Genbank:WP_002211780.1;Name=WP_002211780.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211780.1;transl_table=11 NC_014022.1 RefSeq gene 20701 21045 . - . ID=gene4317;Name=YPZ3_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21650;old_locus_tag=YPZ3_pMT0016 NC_014022.1 Protein Homology CDS 20701 21045 . - 0 ID=cds4223;Parent=gene4317;Dbxref=Genbank:WP_001027662.1;Name=WP_001027662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001027662.1;transl_table=11 NC_014022.1 RefSeq gene 21143 21976 . - . ID=gene4318;Name=YPZ3_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21655;old_locus_tag=YPZ3_pMT0017 NC_014022.1 Protein Homology CDS 21143 21976 . - 0 ID=cds4224;Parent=gene4318;Dbxref=Genbank:WP_002211781.1;Name=WP_002211781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211781.1;transl_table=11 NC_014022.1 RefSeq gene 21976 22410 . - . ID=gene4319;Name=YPZ3_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21660;old_locus_tag=YPZ3_pMT0018 NC_014022.1 Protein Homology CDS 21976 22410 . - 0 ID=cds4225;Parent=gene4319;Dbxref=Genbank:WP_002211782.1;Name=WP_002211782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211782.1;transl_table=11 NC_014022.1 RefSeq gene 22454 23116 . - . ID=gene4320;Name=YPZ3_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21665;old_locus_tag=YPZ3_pMT0019 NC_014022.1 Protein Homology CDS 22454 23116 . - 0 ID=cds4226;Parent=gene4320;Dbxref=Genbank:WP_002211783.1;Name=WP_002211783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211783.1;transl_table=11 NC_014022.1 RefSeq gene 23191 24066 . - . ID=gene4321;Name=YPZ3_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21670;old_locus_tag=YPZ3_pMT0020 NC_014022.1 Protein Homology CDS 23191 24066 . - 0 ID=cds4227;Parent=gene4321;Dbxref=Genbank:WP_002211784.1;Name=WP_002211784.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_002211784.1;transl_table=11 NC_014022.1 RefSeq gene 24093 24926 . - . ID=gene4322;Name=YPZ3_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21675;old_locus_tag=YPZ3_pMT0021 NC_014022.1 Protein Homology CDS 24093 24926 . - 0 ID=cds4228;Parent=gene4322;Dbxref=Genbank:WP_002211785.1;Name=WP_002211785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211785.1;transl_table=11 NC_014022.1 RefSeq gene 24949 26523 . - . ID=gene4323;Name=YPZ3_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21680;old_locus_tag=YPZ3_pMT0022 NC_014022.1 Protein Homology CDS 24949 26523 . - 0 ID=cds4229;Parent=gene4323;Dbxref=Genbank:WP_002211786.1;Name=WP_002211786.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211786.1;transl_table=11 NC_014022.1 RefSeq gene 26557 27813 . - . ID=gene4324;Name=YPZ3_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21685;old_locus_tag=YPZ3_pMT0023 NC_014022.1 Protein Homology CDS 26557 27813 . - 0 ID=cds4230;Parent=gene4324;Dbxref=Genbank:WP_002211787.1;Name=WP_002211787.1;gbkey=CDS;product=terminase;protein_id=WP_002211787.1;transl_table=11 NC_014022.1 RefSeq gene 27816 28457 . - . ID=gene4325;Name=YPZ3_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21690;old_locus_tag=YPZ3_pMT0024 NC_014022.1 Protein Homology CDS 27816 28457 . - 0 ID=cds4231;Parent=gene4325;Dbxref=Genbank:WP_002211788.1;Name=WP_002211788.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211788.1;transl_table=11 NC_014022.1 RefSeq gene 28653 28919 . - . ID=gene4326;Name=YPZ3_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21695 NC_014022.1 Protein Homology CDS 28653 28919 . - 0 ID=cds4232;Parent=gene4326;Dbxref=Genbank:WP_000176291.1;Name=WP_000176291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000176291.1;transl_table=11 NC_014022.1 RefSeq gene 28929 29819 . - . ID=gene4327;Name=YPZ3_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21700;old_locus_tag=YPZ3_pMT0025 NC_014022.1 Protein Homology CDS 28929 29819 . - 0 ID=cds4233;Parent=gene4327;Dbxref=Genbank:WP_002211789.1;Name=WP_002211789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211789.1;transl_table=11 NC_014022.1 RefSeq gene 29825 30079 . - . ID=gene4328;Name=YPZ3_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21705 NC_014022.1 Protein Homology CDS 29825 30079 . - 0 ID=cds4234;Parent=gene4328;Dbxref=Genbank:WP_002211790.1;Name=WP_002211790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211790.1;transl_table=11 NC_014022.1 RefSeq gene 30072 30710 . - . ID=gene4329;Name=YPZ3_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21710;old_locus_tag=YPZ3_pMT0026 NC_014022.1 Protein Homology CDS 30072 30710 . - 0 ID=cds4235;Parent=gene4329;Dbxref=Genbank:WP_002211791.1;Name=WP_002211791.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211791.1;transl_table=11 NC_014022.1 RefSeq gene 30707 31375 . - . ID=gene4330;Name=YPZ3_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21715;old_locus_tag=YPZ3_pMT0027 NC_014022.1 Protein Homology CDS 30707 31375 . - 0 ID=cds4236;Parent=gene4330;Dbxref=Genbank:WP_002211792.1;Name=WP_002211792.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002211792.1;transl_table=11 NC_014022.1 RefSeq gene 31375 32073 . - . ID=gene4331;Name=YPZ3_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21720;old_locus_tag=YPZ3_pMT0028 NC_014022.1 Protein Homology CDS 31375 32073 . - 0 ID=cds4237;Parent=gene4331;Dbxref=Genbank:WP_002228791.1;Name=WP_002228791.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002228791.1;transl_table=11 NC_014022.1 RefSeq gene 32138 33697 . + . ID=gene4332;Name=YPZ3_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21725;old_locus_tag=YPZ3_pMT0029 NC_014022.1 Protein Homology CDS 32138 33697 . + 0 ID=cds4238;Parent=gene4332;Dbxref=Genbank:WP_002211794.1;Name=WP_002211794.1;gbkey=CDS;product=helicase;protein_id=WP_002211794.1;transl_table=11 NC_014022.1 RefSeq gene 33700 33978 . + . ID=gene4333;Name=YPZ3_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21730 NC_014022.1 Protein Homology CDS 33700 33978 . + 0 ID=cds4239;Parent=gene4333;Dbxref=Genbank:WP_002214131.1;Name=WP_002214131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214131.1;transl_table=11 NC_014022.1 RefSeq gene 34038 34460 . + . ID=gene4334;Name=YPZ3_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21735;old_locus_tag=YPZ3_pMT0030 NC_014022.1 Protein Homology CDS 34038 34460 . + 0 ID=cds4240;Parent=gene4334;Dbxref=Genbank:WP_002211796.1;Name=WP_002211796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211796.1;transl_table=11 NC_014022.1 RefSeq gene 34465 34992 . + . ID=gene4335;Name=YPZ3_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21740;old_locus_tag=YPZ3_pMT0031 NC_014022.1 Protein Homology CDS 34465 34992 . + 0 ID=cds4241;Parent=gene4335;Dbxref=Genbank:WP_002214134.1;Name=WP_002214134.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214134.1;transl_table=11 NC_014022.1 RefSeq gene 35315 35965 . + . ID=gene4336;Name=YPZ3_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21745;old_locus_tag=YPZ3_pMT0032 NC_014022.1 Protein Homology CDS 35315 35965 . + 0 ID=cds4242;Parent=gene4336;Dbxref=Genbank:WP_002211799.1;Name=WP_002211799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211799.1;transl_table=11 NC_014022.1 RefSeq gene 36050 36277 . + . ID=gene4337;Name=YPZ3_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21750 NC_014022.1 Protein Homology CDS 36050 36277 . + 0 ID=cds4243;Parent=gene4337;Dbxref=Genbank:WP_002214137.1;Name=WP_002214137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214137.1;transl_table=11 NC_014022.1 RefSeq gene 36578 36937 . + . ID=gene4338;Name=YPZ3_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21755 NC_014022.1 Protein Homology CDS 36578 36937 . + 0 ID=cds4244;Parent=gene4338;Dbxref=Genbank:WP_002214139.1;Name=WP_002214139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214139.1;transl_table=11 NC_014022.1 RefSeq gene 36916 37398 . - . ID=gene4339;Name=YPZ3_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21760;old_locus_tag=YPZ3_pMT0033 NC_014022.1 Protein Homology CDS 36916 37398 . - 0 ID=cds4245;Parent=gene4339;Dbxref=Genbank:WP_002211801.1;Name=WP_002211801.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211801.1;transl_table=11 NC_014022.1 RefSeq gene 37411 37587 . - . ID=gene4340;Name=YPZ3_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21765 NC_014022.1 Protein Homology CDS 37411 37587 . - 0 ID=cds4246;Parent=gene4340;Dbxref=Genbank:WP_002233073.1;Name=WP_002233073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233073.1;transl_table=11 NC_014022.1 RefSeq gene 37604 37885 . - . ID=gene4341;Name=YPZ3_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21770 NC_014022.1 Protein Homology CDS 37604 37885 . - 0 ID=cds4247;Parent=gene4341;Dbxref=Genbank:WP_002211802.1;Name=WP_002211802.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211802.1;transl_table=11 NC_014022.1 RefSeq gene 38085 38543 . - . ID=gene4342;Name=YPZ3_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21775;old_locus_tag=YPZ3_pMT0034 NC_014022.1 Protein Homology CDS 38085 38543 . - 0 ID=cds4248;Parent=gene4342;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_014022.1 RefSeq gene 38553 38676 . - . ID=gene4343;Name=YPZ3_RS22185;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPZ3_RS22185 NC_014022.1 cmsearch ncRNA 38553 38676 . - . ID=rna87;Parent=gene4343;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_014022.1 cmsearch exon 38553 38676 . - . ID=id373;Parent=rna87;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_014022.1 RefSeq gene 38752 39321 . - . ID=gene4344;Name=YPZ3_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21780;old_locus_tag=YPZ3_pMT0035 NC_014022.1 Protein Homology CDS 38752 39321 . - 0 ID=cds4249;Parent=gene4344;Dbxref=Genbank:WP_002214145.1;Name=WP_002214145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214145.1;transl_table=11 NC_014022.1 RefSeq gene 39334 40080 . - . ID=gene4345;Name=YPZ3_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21785;old_locus_tag=YPZ3_pMT0036 NC_014022.1 Protein Homology CDS 39334 40080 . - 0 ID=cds4250;Parent=gene4345;Dbxref=Genbank:WP_002213303.1;Name=WP_002213303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213303.1;transl_table=11 NC_014022.1 RefSeq gene 40070 41986 . - . ID=gene4346;Name=YPZ3_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21790;old_locus_tag=YPZ3_pMT0037 NC_014022.1 Protein Homology CDS 40070 41986 . - 0 ID=cds4251;Parent=gene4346;Dbxref=Genbank:WP_002214148.1;Name=WP_002214148.1;gbkey=CDS;product=exonuclease;protein_id=WP_002214148.1;transl_table=11 NC_014022.1 RefSeq gene 41995 42219 . - . ID=gene4347;Name=YPZ3_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21795 NC_014022.1 Protein Homology CDS 41995 42219 . - 0 ID=cds4252;Parent=gene4347;Dbxref=Genbank:WP_002228794.1;Name=WP_002228794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228794.1;transl_table=11 NC_014022.1 RefSeq gene 42216 43301 . - . ID=gene4348;Name=YPZ3_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21800;old_locus_tag=YPZ3_pMT0038 NC_014022.1 Protein Homology CDS 42216 43301 . - 0 ID=cds4253;Parent=gene4348;Dbxref=Genbank:WP_002213300.1;Name=WP_002213300.1;gbkey=CDS;product=exonuclease;protein_id=WP_002213300.1;transl_table=11 NC_014022.1 RefSeq gene 43450 43638 . + . ID=gene4349;Name=YPZ3_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21805 NC_014022.1 Protein Homology CDS 43450 43638 . + 0 ID=cds4254;Parent=gene4349;Dbxref=Genbank:WP_002214154.1;Name=WP_002214154.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214154.1;transl_table=11 NC_014022.1 RefSeq gene 43717 44739 . + . ID=gene4350;Name=YPZ3_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21810;old_locus_tag=YPZ3_pMT0039 NC_014022.1 Protein Homology CDS 43717 44739 . + 0 ID=cds4255;Parent=gene4350;Dbxref=Genbank:WP_002213298.1;Name=WP_002213298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213298.1;transl_table=11 NC_014022.1 RefSeq gene 44877 45023 . - . ID=gene4351;Name=YPZ3_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21815 NC_014022.1 Protein Homology CDS 44877 45023 . - 0 ID=cds4256;Parent=gene4351;Dbxref=Genbank:WP_002214158.1;Name=WP_002214158.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214158.1;transl_table=11 NC_014022.1 RefSeq gene 45099 45743 . - . ID=gene4352;Name=YPZ3_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21820;old_locus_tag=YPZ3_pMT0040 NC_014022.1 Protein Homology CDS 45099 45743 . - 0 ID=cds4257;Parent=gene4352;Dbxref=Genbank:WP_002214160.1;Name=WP_002214160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214160.1;transl_table=11 NC_014022.1 RefSeq gene 46488 47552 . + . ID=gene4353;Name=YPZ3_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21825;old_locus_tag=YPZ3_pMT0041 NC_014022.1 Protein Homology CDS 46488 47552 . + 0 ID=cds4258;Parent=gene4353;Dbxref=Genbank:WP_002214164.1;Name=WP_002214164.1;gbkey=CDS;product=replication protein RepA;protein_id=WP_002214164.1;transl_table=11 NC_014022.1 RefSeq gene 48121 48333 . - . ID=gene4354;Name=YPZ3_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21830 NC_014022.1 Protein Homology CDS 48121 48333 . - 0 ID=cds4259;Parent=gene4354;Dbxref=Genbank:WP_002222711.1;Name=WP_002222711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222711.1;transl_table=11 NC_014022.1 RefSeq gene 48333 48668 . - . ID=gene4355;Name=YPZ3_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21835;old_locus_tag=YPZ3_pMT0042 NC_014022.1 Protein Homology CDS 48333 48668 . - 0 ID=cds4260;Parent=gene4355;Dbxref=Genbank:WP_002227818.1;Name=WP_002227818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227818.1;transl_table=11 NC_014022.1 RefSeq gene 48665 48844 . - . ID=gene4356;Name=YPZ3_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21840 NC_014022.1 Protein Homology CDS 48665 48844 . - 0 ID=cds4261;Parent=gene4356;Dbxref=Genbank:WP_002228796.1;Name=WP_002228796.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228796.1;transl_table=11 NC_014022.1 RefSeq gene 48885 49160 . - . ID=gene4357;Name=YPZ3_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21845 NC_014022.1 Protein Homology CDS 48885 49160 . - 0 ID=cds4262;Parent=gene4357;Dbxref=Genbank:WP_002228797.1;Name=WP_002228797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228797.1;transl_table=11 NC_014022.1 RefSeq gene 49228 49638 . - . ID=gene4358;Name=YPZ3_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21850;old_locus_tag=YPZ3_pMT0043 NC_014022.1 Protein Homology CDS 49228 49638 . - 0 ID=cds4263;Parent=gene4358;Dbxref=Genbank:WP_002222869.1;Name=WP_002222869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222869.1;transl_table=11 NC_014022.1 RefSeq gene 49622 49993 . - . ID=gene4359;Name=YPZ3_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21855;old_locus_tag=YPZ3_pMT0044 NC_014022.1 Protein Homology CDS 49622 49993 . - 0 ID=cds4264;Parent=gene4359;Dbxref=Genbank:WP_002222868.1;Name=WP_002222868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222868.1;transl_table=11 NC_014022.1 RefSeq gene 50147 50977 . - . ID=gene4360;Name=YPZ3_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21860;old_locus_tag=YPZ3_pMT0045 NC_014022.1 Protein Homology CDS 50147 50977 . - 0 ID=cds4265;Parent=gene4360;Dbxref=Genbank:WP_002222866.1;Name=WP_002222866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222866.1;transl_table=11 NC_014022.1 RefSeq gene 50981 51181 . - . ID=gene4361;Name=YPZ3_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21865 NC_014022.1 Protein Homology CDS 50981 51181 . - 0 ID=cds4266;Parent=gene4361;Dbxref=Genbank:WP_002213439.1;Name=WP_002213439.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213439.1;transl_table=11 NC_014022.1 RefSeq gene 51272 52348 . - . ID=gene4362;Name=YPZ3_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21870;old_locus_tag=YPZ3_pMT0046 NC_014022.1 Protein Homology CDS 51272 52348 . - 0 ID=cds4267;Parent=gene4362;Dbxref=Genbank:WP_002213437.1;Name=WP_002213437.1;gbkey=CDS;product=recombinase;protein_id=WP_002213437.1;transl_table=11 NC_014022.1 RefSeq gene 52351 52617 . - . ID=gene4363;Name=YPZ3_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21875 NC_014022.1 Protein Homology CDS 52351 52617 . - 0 ID=cds4268;Parent=gene4363;Dbxref=Genbank:WP_000920226.1;Name=WP_000920226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000920226.1;transl_table=11 NC_014022.1 RefSeq gene 52617 53561 . - . ID=gene4364;Name=YPZ3_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21880;old_locus_tag=YPZ3_pMT0047 NC_014022.1 Protein Homology CDS 52617 53561 . - 0 ID=cds4269;Parent=gene4364;Dbxref=Genbank:WP_002225551.1;Name=WP_002225551.1;gbkey=CDS;product=exonuclease;protein_id=WP_002225551.1;transl_table=11 NC_014022.1 RefSeq gene 53622 54650 . - . ID=gene4365;Name=YPZ3_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21885;old_locus_tag=YPZ3_pMT0048 NC_014022.1 Protein Homology CDS 53622 54650 . - 0 ID=cds4270;Parent=gene4365;Dbxref=Genbank:WP_002213132.1;Name=WP_002213132.1;gbkey=CDS;product=regulator;protein_id=WP_002213132.1;transl_table=11 NC_014022.1 RefSeq gene 54770 55201 . - . ID=gene4366;Name=YPZ3_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21890;old_locus_tag=YPZ3_pMT0049 NC_014022.1 Protein Homology CDS 54770 55201 . - 0 ID=cds4271;Parent=gene4366;Dbxref=Genbank:WP_002213135.1;Name=WP_002213135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213135.1;transl_table=11 NC_014022.1 RefSeq gene 55422 55673 . + . ID=gene4367;Name=YPZ3_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21895 NC_014022.1 Protein Homology CDS 55422 55673 . + 0 ID=cds4272;Parent=gene4367;Dbxref=Genbank:WP_002215095.1;Name=WP_002215095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215095.1;transl_table=11 NC_014022.1 RefSeq gene 55746 56309 . + . ID=gene4368;Name=YPZ3_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21900;old_locus_tag=YPZ3_pMT0050 NC_014022.1 Protein Homology CDS 55746 56309 . + 0 ID=cds4273;Parent=gene4368;Dbxref=Genbank:WP_002213141.1;Name=WP_002213141.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002213141.1;transl_table=11 NC_014022.1 RefSeq gene 56339 56782 . - . ID=gene4369;Name=YPZ3_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21905;old_locus_tag=YPZ3_pMT0051 NC_014022.1 Protein Homology CDS 56339 56782 . - 0 ID=cds4274;Parent=gene4369;Dbxref=Genbank:WP_002213143.1;Name=WP_002213143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213143.1;transl_table=11 NC_014022.1 RefSeq gene 56779 60303 . - . ID=gene4370;Name=YPZ3_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21910;old_locus_tag=YPZ3_pMT0052 NC_014022.1 Protein Homology CDS 56779 60303 . - 0 ID=cds4275;Parent=gene4370;Dbxref=Genbank:WP_002221186.1;Name=WP_002221186.1;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=WP_002221186.1;transl_table=11 NC_014022.1 RefSeq gene 60484 61719 . - . ID=gene4371;Name=YPZ3_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21915;old_locus_tag=YPZ3_pMT0053 NC_014022.1 Protein Homology CDS 60484 61719 . - 0 ID=cds4276;Parent=gene4371;Dbxref=Genbank:WP_002211767.1;Name=WP_002211767.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211767.1;transl_table=11 NC_014022.1 RefSeq gene 61816 64182 . - . ID=gene4372;Name=YPZ3_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21920;old_locus_tag=YPZ3_pMT0054 NC_014022.1 Protein Homology CDS 61816 64182 . - 0 ID=cds4277;Parent=gene4372;Dbxref=Genbank:WP_002211766.1;Name=WP_002211766.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211766.1;transl_table=11 NC_014022.1 RefSeq gene 64292 64504 . - . ID=gene4373;Name=YPZ3_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21925 NC_014022.1 Protein Homology CDS 64292 64504 . - 0 ID=cds4278;Parent=gene4373;Dbxref=Genbank:WP_002228800.1;Name=WP_002228800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228800.1;transl_table=11 NC_014022.1 RefSeq gene 64767 65153 . + . ID=gene4374;Name=YPZ3_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21930;old_locus_tag=YPZ3_pMT0055 NC_014022.1 Protein Homology CDS 64767 65153 . + 0 ID=cds4279;Parent=gene4374;Dbxref=Genbank:WP_002228802.1;Name=WP_002228802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228802.1;transl_table=11 NC_014022.1 RefSeq gene 65148 66251 . - . ID=gene4375;Name=YPZ3_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21935;old_locus_tag=YPZ3_pMT0056 NC_014022.1 Protein Homology CDS 65148 66251 . - 0 ID=cds4280;Parent=gene4375;Dbxref=Genbank:WP_002353208.1;Name=WP_002353208.1;gbkey=CDS;product=integrase;protein_id=WP_002353208.1;transl_table=11 NC_014022.1 RefSeq gene 67011 67523 . - . ID=gene4376;Name=YPZ3_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21940;old_locus_tag=YPZ3_pMT0057 NC_014022.1 Protein Homology CDS 67011 67523 . - 0 ID=cds4281;Parent=gene4376;Dbxref=Genbank:WP_002216410.1;Name=WP_002216410.1;gbkey=CDS;product=F1 capsule antigen;protein_id=WP_002216410.1;transl_table=11 NC_014022.1 RefSeq gene 67604 70105 . - . ID=gene4377;Name=YPZ3_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21945;old_locus_tag=YPZ3_pMT0058 NC_014022.1 Protein Homology CDS 67604 70105 . - 0 ID=cds4282;Parent=gene4377;Dbxref=Genbank:WP_002211763.1;Name=WP_002211763.1;gbkey=CDS;product=F1 capsule-anchoring protein;protein_id=WP_002211763.1;transl_table=11 NC_014022.1 RefSeq gene 70130 70906 . - . ID=gene4378;Name=YPZ3_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21950;old_locus_tag=YPZ3_pMT0059 NC_014022.1 Protein Homology CDS 70130 70906 . - 0 ID=cds4283;Parent=gene4378;Dbxref=Genbank:WP_002211762.1;Name=WP_002211762.1;gbkey=CDS;product=chaperone protein caf1M;protein_id=WP_002211762.1;transl_table=11 NC_014022.1 RefSeq gene 71234 72139 . + . ID=gene4379;Name=YPZ3_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21955;old_locus_tag=YPZ3_pMT0060 NC_014022.1 Protein Homology CDS 71234 72139 . + 0 ID=cds4284;Parent=gene4379;Dbxref=Genbank:WP_002211761.1;Name=WP_002211761.1;gbkey=CDS;product=F1 operon positive regulatory protein;protein_id=WP_002211761.1;transl_table=11 NC_014022.1 RefSeq gene 72488 73696 . + . ID=gene4380;Name=YPZ3_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21960;old_locus_tag=YPZ3_pMT0061 NC_014022.1 Protein Homology CDS 72488 73696 . + 0 ID=cds4285;Parent=gene4380;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_014022.1 RefSeq gene 73826 74005 . + . ID=gene4381;Name=YPZ3_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21965 NC_014022.1 Protein Homology CDS 73826 74005 . + 0 ID=cds4286;Parent=gene4381;Dbxref=Genbank:WP_002216419.1;Name=WP_002216419.1;gbkey=CDS;product=DNA helicase;protein_id=WP_002216419.1;transl_table=11 NC_014022.1 RefSeq gene 74165 75187 . + . ID=gene4382;Name=YPZ3_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21970;old_locus_tag=YPZ3_pMT0062 NC_014022.1 Protein Homology CDS 74165 75187 . + 0 ID=cds4287;Parent=gene4382;Dbxref=Genbank:WP_002211760.1;Name=WP_002211760.1;gbkey=CDS;product=transposase;protein_id=WP_002211760.1;transl_table=11 NC_014022.1 RefSeq gene 75386 75703 . - . ID=gene4383;Name=YPZ3_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21975;old_locus_tag=YPZ3_pMT0063 NC_014022.1 Protein Homology CDS 75386 75703 . - 0 ID=cds4288;Parent=gene4383;Dbxref=Genbank:WP_002216421.1;Name=WP_002216421.1;gbkey=CDS;product=transposase;protein_id=WP_002216421.1;transl_table=11 NC_014022.1 RefSeq gene 75883 76254 . - . ID=gene4384;Name=YPZ3_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21980 NC_014022.1 Protein Homology CDS 75883 76254 . - 0 ID=cds4289;Parent=gene4384;Dbxref=Genbank:WP_002228772.1;Name=WP_002228772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228772.1;transl_table=11 NC_014022.1 RefSeq gene 76169 76477 . - . ID=gene4385;Name=YPZ3_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21985 NC_014022.1 Protein Homology CDS 76169 76477 . - 0 ID=cds4290;Parent=gene4385;Dbxref=Genbank:WP_002228773.1;Name=WP_002228773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228773.1;transl_table=11 NC_014022.1 RefSeq gene 76563 77018 . + . ID=gene4386;Name=YPZ3_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21990;old_locus_tag=YPZ3_pMT0064 NC_014022.1 Protein Homology CDS 76563 77018 . + 0 ID=cds4291;Parent=gene4386;Dbxref=Genbank:WP_002353217.1;Name=WP_002353217.1;gbkey=CDS;product=reverse transcriptase;protein_id=WP_002353217.1;transl_table=11 NC_014022.1 RefSeq gene 77263 79026 . - . ID=gene4387;Name=YPZ3_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS21995;old_locus_tag=YPZ3_pMT0065 NC_014022.1 Protein Homology CDS 77263 79026 . - 0 ID=cds4292;Parent=gene4387;Dbxref=Genbank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211758.1;transl_table=11 NC_014022.1 RefSeq gene 79104 79592 . - . ID=gene4388;Name=YPZ3_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22000;old_locus_tag=YPZ3_pMT0066 NC_014022.1 Protein Homology CDS 79104 79592 . - 0 ID=cds4293;Parent=gene4388;Dbxref=Genbank:WP_002211757.1;Name=WP_002211757.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211757.1;transl_table=11 NC_014022.1 RefSeq gene 80331 80606 . + . ID=gene4389;Name=YPZ3_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22005 NC_014022.1 Protein Homology CDS 80331 80606 . + 0 ID=cds4294;Parent=gene4389;Dbxref=Genbank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11 NC_014022.1 RefSeq gene 80629 81570 . - . ID=gene4390;Name=YPZ3_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22010;old_locus_tag=YPZ3_pMT0067 NC_014022.1 Protein Homology CDS 80629 81570 . - 0 ID=cds4295;Parent=gene4390;Dbxref=Genbank:WP_002215065.1;Name=WP_002215065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215065.1;transl_table=11 NC_014022.1 RefSeq gene 81636 82256 . - . ID=gene4391;Name=YPZ3_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22015;old_locus_tag=YPZ3_pMT0068 NC_014022.1 Protein Homology CDS 81636 82256 . - 0 ID=cds4296;Parent=gene4391;Dbxref=Genbank:WP_002211754.1;Name=WP_002211754.1;gbkey=CDS;product=serine recombinase;protein_id=WP_002211754.1;transl_table=11 NC_014022.1 RefSeq gene 82456 82782 . - . ID=gene4392;Name=YPZ3_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22020 NC_014022.1 Protein Homology CDS 82456 82782 . - 0 ID=cds4297;Parent=gene4392;Dbxref=Genbank:WP_002215068.1;Name=WP_002215068.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002215068.1;transl_table=11 NC_014022.1 RefSeq gene 82782 83009 . - . ID=gene4393;Name=YPZ3_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22025 NC_014022.1 Protein Homology CDS 82782 83009 . - 0 ID=cds4298;Parent=gene4393;Dbxref=Genbank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;product=prevent-host-death protein;protein_id=WP_002211753.1;transl_table=11 NC_014022.1 RefSeq gene 83311 84516 . + . ID=gene4394;Name=YPZ3_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22030;old_locus_tag=YPZ3_pMT0069 NC_014022.1 Protein Homology CDS 83311 84516 . + 0 ID=cds4299;Parent=gene4394;Dbxref=Genbank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002211752.1;transl_table=11 NC_014022.1 RefSeq gene 84513 85484 . + . ID=gene4395;Name=YPZ3_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22035;old_locus_tag=YPZ3_pMT0070 NC_014022.1 Protein Homology CDS 84513 85484 . + 0 ID=cds4300;Parent=gene4395;Dbxref=Genbank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002215070.1;transl_table=11 NC_014022.1 RefSeq gene 85863 87260 . + . ID=gene4396;Name=YPZ3_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22040;old_locus_tag=YPZ3_pMT0071 NC_014022.1 Protein Homology CDS 85863 87260 . + 0 ID=cds4301;Parent=gene4396;Dbxref=Genbank:WP_002228775.1;Name=WP_002228775.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228775.1;transl_table=11 NC_014022.1 RefSeq gene 87422 87622 . - . ID=gene4397;Name=YPZ3_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22045 NC_014022.1 Protein Homology CDS 87422 87622 . - 0 ID=cds4302;Parent=gene4397;Dbxref=Genbank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11 NC_014022.1 RefSeq gene 88123 88800 . + . ID=gene4398;Name=YPZ3_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22050;old_locus_tag=YPZ3_pMT0072 NC_014022.1 Protein Homology CDS 88123 88800 . + 0 ID=cds4303;Parent=gene4398;Dbxref=Genbank:WP_002211749.1;Name=WP_002211749.1;gbkey=CDS;product=methylase;protein_id=WP_002211749.1;transl_table=11 NC_014022.1 RefSeq gene 88800 89021 . + . ID=gene4399;Name=YPZ3_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22055 NC_014022.1 Protein Homology CDS 88800 89021 . + 0 ID=cds4304;Parent=gene4399;Dbxref=Genbank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211748.1;transl_table=11 NC_014022.1 RefSeq gene 89032 89451 . + . ID=gene4400;Name=YPZ3_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22060;old_locus_tag=YPZ3_pMT0073 NC_014022.1 Protein Homology CDS 89032 89451 . + 0 ID=cds4305;Parent=gene4400;Dbxref=Genbank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215082.1;transl_table=11 NC_014022.1 RefSeq gene 89505 90284 . + . ID=gene4401;Name=YPZ3_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22065;old_locus_tag=YPZ3_pMT0074 NC_014022.1 Protein Homology CDS 89505 90284 . + 0 ID=cds4306;Parent=gene4401;Dbxref=Genbank:WP_002211747.1;Name=WP_002211747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211747.1;transl_table=11 NC_014022.1 RefSeq gene 90683 91189 . + . ID=gene4402;Name=YPZ3_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22070;old_locus_tag=YPZ3_pMT0075 NC_014022.1 Protein Homology CDS 90683 91189 . + 0 ID=cds4307;Parent=gene4402;Dbxref=Genbank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_002211746.1;transl_table=11 NC_014022.1 RefSeq gene 91902 92132 . + . ID=gene4403;Name=YPZ3_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22075 NC_014022.1 Protein Homology CDS 91902 92132 . + 0 ID=cds4308;Parent=gene4403;Dbxref=Genbank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211745.1;transl_table=11 NC_014022.1 RefSeq gene 92205 94214 . + . ID=gene4404;Name=YPZ3_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22080;old_locus_tag=YPZ3_pMT0076 NC_014022.1 Protein Homology CDS 92205 94214 . + 0 ID=cds4309;Parent=gene4404;Dbxref=Genbank:WP_002211744.1;Name=WP_002211744.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211744.1;transl_table=11 ##sequence-region NC_014027.1 1 9609 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637386 NC_014027.1 RefSeq region 1 9609 . + . ID=id374;Dbxref=taxon:637386;Is_circular=true;Name=pPCP1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pPCP1;strain=Z176003 NC_014027.1 RefSeq gene 87 1109 . + . ID=gene4405;Name=YPZ3_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22090;old_locus_tag=YPZ3_pPCP0001 NC_014027.1 Protein Homology CDS 87 1109 . + 0 ID=cds4310;Parent=gene4405;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_014027.1 RefSeq gene 1109 1888 . + . ID=gene4406;Name=YPZ3_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22095;old_locus_tag=YPZ3_pPCP0002 NC_014027.1 Protein Homology CDS 1109 1888 . + 0 ID=cds4311;Parent=gene4406;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_014027.1 RefSeq gene 2925 3119 . + . ID=gene4407;Name=YPZ3_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22100 NC_014027.1 Protein Homology CDS 2925 3119 . + 0 ID=cds4312;Parent=gene4407;Dbxref=Genbank:WP_002213433.1;Name=WP_002213433.1;gbkey=CDS;product=rop protein;protein_id=WP_002213433.1;transl_table=11 NC_014027.1 RefSeq gene 4355 4780 . + . ID=gene4408;Name=YPZ3_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22105 NC_014027.1 Protein Homology CDS 4355 4780 . + 0 ID=cds4313;Parent=gene4408;Dbxref=Genbank:WP_002218512.1;Name=WP_002218512.1;gbkey=CDS;product=pesticin immunity protein;protein_id=WP_002218512.1;transl_table=11 NC_014027.1 RefSeq gene 4815 5888 . - . ID=gene4409;Name=YPZ3_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22110;old_locus_tag=YPZ3_pPCP0005 NC_014027.1 Protein Homology CDS 4815 5888 . - 0 ID=cds4314;Parent=gene4409;Dbxref=Genbank:WP_002218509.1;Name=WP_002218509.1;gbkey=CDS;product=peptidase;protein_id=WP_002218509.1;transl_table=11 NC_014027.1 RefSeq gene 6116 6421 . + . ID=gene4410;Name=YPZ3_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22115 NC_014027.1 Protein Homology CDS 6116 6421 . + 0 ID=cds4315;Parent=gene4410;Dbxref=Genbank:WP_002221218.1;Name=WP_002221218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221218.1;transl_table=11 NC_014027.1 RefSeq gene 6664 7602 . + . ID=gene4411;Name=YPZ3_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22120;old_locus_tag=YPZ3_pPCP0007 NC_014027.1 Protein Homology CDS 6664 7602 . + 0 ID=cds4316;Parent=gene4411;Dbxref=Genbank:WP_002218234.1;Name=WP_002218234.1;gbkey=CDS;product=coagulase/fibrinolysin;protein_id=WP_002218234.1;transl_table=11 NC_014027.1 RefSeq gene 7789 8088 . - . ID=gene4412;Name=YPZ3_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22125 NC_014027.1 Protein Homology CDS 7789 8088 . - 0 ID=cds4317;Parent=gene4412;Dbxref=Genbank:WP_002213446.1;Name=WP_002213446.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213446.1;transl_table=11 NC_014027.1 RefSeq gene 8088 8429 . - . ID=gene4413;Name=YPZ3_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22130;old_locus_tag=YPZ3_pPCP0008 NC_014027.1 Protein Homology CDS 8088 8429 . - 0 ID=cds4318;Parent=gene4413;Dbxref=Genbank:WP_002225538.1;Name=WP_002225538.1;gbkey=CDS;product=toxin RelE;protein_id=WP_002225538.1;transl_table=11 NC_014027.1 RefSeq gene 9132 9347 . - . ID=gene4414;Name=YPZ3_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPZ3_RS22135 NC_014027.1 Protein Homology CDS 9132 9347 . - 0 ID=cds4319;Parent=gene4414;Dbxref=Genbank:WP_002213461.1;Name=WP_002213461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213461.1;transl_table=11 ###