##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM18672v1 #!genome-build-accession NCBI_Assembly:GCF_000186725.1 ##sequence-region NC_017265.1 1 4532063 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=547048 NC_017265.1 RefSeq region 1 4532063 . + . ID=id0;Dbxref=taxon:547048;Is_circular=true;Name=ANONYMOUS;biovar=Medievalis;country=China;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Harbin 35;sub-species=pestis NC_017265.1 RefSeq gene 270 710 . - . ID=gene0;Name=YPC_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00005;old_locus_tag=YPC_0001 NC_017265.1 Protein Homology CDS 270 710 . - 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_002212258.1;Name=WP_002212258.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NC_017265.1 RefSeq gene 803 1264 . - . ID=gene1;Name=YPC_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00010;old_locus_tag=YPC_0002 NC_017265.1 Protein Homology CDS 803 1264 . - 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11 NC_017265.1 RefSeq gene 1434 2426 . + . ID=gene2;Name=YPC_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00015;old_locus_tag=YPC_0003 NC_017265.1 Protein Homology CDS 1434 2426 . + 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NC_017265.1 RefSeq gene 2525 3991 . - . ID=gene3;Name=YPC_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00020;old_locus_tag=YPC_0004 NC_017265.1 Protein Homology CDS 2525 3991 . - 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_002212255.1;Name=WP_002212255.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_002212255.1;transl_table=11 NC_017265.1 RefSeq gene 3995 5548 . - . ID=gene4;Name=YPC_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00025;old_locus_tag=YPC_0005 NC_017265.1 Protein Homology CDS 3995 5548 . - 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_002212254.1;Name=WP_002212254.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase RavA;protein_id=WP_002212254.1;transl_table=11 NC_017265.1 RefSeq gene 5822 7690 . + . ID=gene5;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=YPC_RS00030;old_locus_tag=YPC_0006 NC_017265.1 Protein Homology CDS 5822 7690 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_002212253.1;Name=WP_002212253.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_002212253.1;transl_table=11 NC_017265.1 RefSeq gene 7895 8314 . + . ID=gene6;Name=YPC_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00035;old_locus_tag=YPC_0007 NC_017265.1 Protein Homology CDS 7895 8314 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NC_017265.1 RefSeq gene 8365 9291 . + . ID=gene7;Name=YPC_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00040;old_locus_tag=YPC_0008 NC_017265.1 Protein Homology CDS 8365 9291 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_002212251.1;Name=WP_002212251.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NC_017265.1 RefSeq gene 9344 9514 . + . ID=gene8;Name=YPC_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00045;old_locus_tag=YPC_0009 NC_017265.1 Protein Homology CDS 9344 9514 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11 NC_017265.1 RefSeq gene 9511 10935 . - . ID=gene9;Name=YPC_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00050;old_locus_tag=YPC_0010 NC_017265.1 Protein Homology CDS 9511 10935 . - 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_002212250.1;Name=WP_002212250.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002212250.1;transl_table=11 NC_017265.1 RefSeq gene 11015 11704 . - . ID=gene10;Name=YPC_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00055;old_locus_tag=YPC_0011 NC_017265.1 Protein Homology CDS 11015 11704 . - 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NC_017265.1 RefSeq repeat_region 11815 17409 . + . ID=id1;gbkey=repeat_region NC_017265.1 RefSeq gene 12261 13809 . + . ID=gene11;Name=YPC_RS00065;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS00065;old_locus_tag=YPC_0013 NC_017265.1 RefSeq rRNA 12261 13809 . + . ID=rna0;Parent=gene11;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq exon 12261 13809 . + . ID=id2;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq gene 13943 14018 . + . ID=gene12;Name=YPC_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS00070;old_locus_tag=YPC_0014 NC_017265.1 tRNAscan-SE tRNA 13943 14018 . + . ID=rna1;Parent=gene12;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu NC_017265.1 tRNAscan-SE exon 13943 14018 . + . ID=id3;Parent=rna1;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu NC_017265.1 RefSeq gene 14262 17195 . + . ID=gene13;Name=YPC_RS00075;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS00075;old_locus_tag=YPC_0015 NC_017265.1 RefSeq rRNA 14262 17195 . + . ID=rna2;Parent=gene13;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq exon 14262 17195 . + . ID=id4;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq gene 17287 17402 . + . ID=gene14;Name=YPC_RS00080;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS00080;old_locus_tag=YPC_0016 NC_017265.1 cmsearch rRNA 17287 17402 . + . ID=rna3;Parent=gene14;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 17287 17402 . + . ID=id5;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 17418 17493 . + . ID=gene15;Name=YPC_RS00085;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS00085;old_locus_tag=YPC_0017 NC_017265.1 tRNAscan-SE tRNA 17418 17493 . + . ID=rna4;Parent=gene15;anticodon=(pos:17451..17453);gbkey=tRNA;product=tRNA-Thr NC_017265.1 tRNAscan-SE exon 17418 17493 . + . ID=id6;Parent=rna4;anticodon=(pos:17451..17453);gbkey=tRNA;product=tRNA-Thr NC_017265.1 RefSeq repeat_region 17526 17659 . + . ID=id7;gbkey=repeat_region NC_017265.1 RefSeq gene 17534 17649 . + . ID=gene16;Name=YPC_RS00090;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS00090;old_locus_tag=YPC_0018 NC_017265.1 cmsearch rRNA 17534 17649 . + . ID=rna5;Parent=gene16;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 17534 17649 . + . ID=id8;Parent=rna5;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 18049 18321 . - . ID=gene17;Name=YPC_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00095 NC_017265.1 Protein Homology CDS 18049 18321 . - 0 ID=cds11;Parent=gene17;Dbxref=Genbank:WP_002430138.1;Name=WP_002430138.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430138.1;transl_table=11 NC_017265.1 RefSeq gene 18389 19318 . + . ID=gene18;Name=YPC_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00100;old_locus_tag=YPC_0019 NC_017265.1 Protein Homology CDS 18389 19318 . + 0 ID=cds12;Parent=gene18;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11 NC_017265.1 RefSeq gene 19738 21336 . + . ID=gene19;Name=YPC_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00105;old_locus_tag=YPC_0021 NC_017265.1 Protein Homology CDS 19738 21336 . + 0 ID=cds13;Parent=gene19;Dbxref=Genbank:WP_014501245.1;Name=WP_014501245.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_014501245.1;transl_table=11 NC_017265.1 RefSeq gene 21383 22690 . + . ID=gene20;Name=YPC_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00110;old_locus_tag=YPC_0022 NC_017265.1 Protein Homology CDS 21383 22690 . + 0 ID=cds14;Parent=gene20;Dbxref=Genbank:WP_002212078.1;Name=WP_002212078.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_002212078.1;transl_table=11 NC_017265.1 RefSeq repeat_region 22734 22908 . + . ID=id9;gbkey=repeat_region NC_017265.1 RefSeq gene 22946 24673 . + . ID=gene21;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YPC_RS00115;old_locus_tag=YPC_0024 NC_017265.1 Protein Homology CDS 22946 24673 . + 0 ID=cds15;Parent=gene21;Dbxref=Genbank:WP_002212079.1;Name=WP_002212079.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_002212079.1;transl_table=11 NC_017265.1 RefSeq gene 24793 25305 . - . ID=gene22;Name=YPC_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00120 NC_017265.1 Protein Homology CDS 24793 25305 . - 0 ID=cds16;Parent=gene22;Dbxref=Genbank:WP_002355282.1;Name=WP_002355282.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002355282.1;transl_table=11 NC_017265.1 RefSeq gene 25290 25637 . - . ID=gene23;Name=YPC_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00125 NC_017265.1 Protein Homology CDS 25290 25637 . - 0 ID=cds17;Parent=gene23;Dbxref=Genbank:WP_002228764.1;Name=WP_002228764.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002228764.1;transl_table=11 NC_017265.1 RefSeq gene 25852 29547 . + . ID=gene24;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YPC_RS00130;old_locus_tag=YPC_0027 NC_017265.1 Protein Homology CDS 25852 29547 . + 0 ID=cds18;Parent=gene24;Dbxref=Genbank:WP_002212080.1;Name=WP_002212080.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_002212080.1;transl_table=11 NC_017265.1 RefSeq gene 29643 34550 . - . ID=gene25;Name=YPC_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00135;old_locus_tag=YPC_0028 NC_017265.1 Protein Homology CDS 29643 34550 . - 0 ID=cds19;Parent=gene25;Dbxref=Genbank:WP_002212081.1;Name=WP_002212081.1;gbkey=CDS;product=hemolysin;protein_id=WP_002212081.1;transl_table=11 NC_017265.1 RefSeq gene 34620 36083 . - . ID=gene26;Name=YPC_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00140;old_locus_tag=YPC_0029 NC_017265.1 Protein Homology CDS 34620 36083 . - 0 ID=cds20;Parent=gene26;Dbxref=Genbank:WP_002230618.1;Name=WP_002230618.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002230618.1;transl_table=11 NC_017265.1 RefSeq gene 36049 36393 . - . ID=gene27;Name=YPC_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00145 NC_017265.1 Protein Homology CDS 36049 36393 . - 0 ID=cds21;Parent=gene27;Dbxref=Genbank:WP_042468188.1;Name=WP_042468188.1;gbkey=CDS;product=hemolysin activator protein;protein_id=WP_042468188.1;transl_table=11 NC_017265.1 RefSeq gene 36874 38259 . - . ID=gene28;Name=YPC_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00150;old_locus_tag=YPC_0032 NC_017265.1 Protein Homology CDS 36874 38259 . - 0 ID=cds22;Parent=gene28;Dbxref=Genbank:WP_002212084.1;Name=WP_002212084.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_002212084.1;transl_table=11 NC_017265.1 RefSeq gene 38629 40275 . + . ID=gene29;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YPC_RS00155;old_locus_tag=YPC_0033 NC_017265.1 Protein Homology CDS 38629 40275 . + 0 ID=cds23;Parent=gene29;Dbxref=Genbank:WP_002212085.1;Name=WP_002212085.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NC_017265.1 RefSeq gene 40410 40817 . + . ID=gene30;Name=YPC_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00160;old_locus_tag=YPC_0034 NC_017265.1 Protein Homology CDS 40410 40817 . + 0 ID=cds24;Parent=gene30;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11 NC_017265.1 RefSeq gene 40960 41850 . - . ID=gene31;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YPC_RS00165;old_locus_tag=YPC_0035 NC_017265.1 Protein Homology CDS 40960 41850 . - 0 ID=cds25;Parent=gene31;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11 NC_017265.1 RefSeq gene 41864 43441 . - . ID=gene32;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YPC_RS00170;old_locus_tag=YPC_0036 NC_017265.1 Protein Homology CDS 41864 43441 . - 0 ID=cds26;Parent=gene32;Dbxref=Genbank:WP_002212088.1;Name=WP_002212088.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_002212088.1;transl_table=11 NC_017265.1 RefSeq gene 43628 44839 . - . ID=gene33;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YPC_RS00175;old_locus_tag=YPC_0037 NC_017265.1 Protein Homology CDS 43628 44839 . - 0 ID=cds27;Parent=gene33;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11 NC_017265.1 RefSeq gene 45427 45663 . + . ID=gene34;Name=YPC_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00180;old_locus_tag=YPC_0038 NC_017265.1 Protein Homology CDS 45427 45663 . + 0 ID=cds28;Parent=gene34;Dbxref=Genbank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11 NC_017265.1 RefSeq gene 45667 46776 . + . ID=gene35;Name=YPC_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00185;old_locus_tag=YPC_0039 NC_017265.1 Protein Homology CDS 45667 46776 . + 0 ID=cds29;Parent=gene35;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NC_017265.1 RefSeq gene 46847 48118 . + . ID=gene36;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=YPC_RS00190;old_locus_tag=YPC_0040 NC_017265.1 Protein Homology CDS 46847 48118 . + 0 ID=cds30;Parent=gene36;Dbxref=Genbank:WP_002212092.1;Name=WP_002212092.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NC_017265.1 RefSeq gene 48359 49270 . + . ID=gene37;Name=YPC_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00195;old_locus_tag=YPC_0041 NC_017265.1 Protein Homology CDS 48359 49270 . + 0 ID=cds31;Parent=gene37;Dbxref=Genbank:WP_002212093.1;Name=WP_002212093.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_002212093.1;transl_table=11 NC_017265.1 RefSeq gene 49741 50019 . + . ID=gene38;Name=YPC_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00200 NC_017265.1 Protein Homology CDS 49741 50019 . + 0 ID=cds32;Parent=gene38;Dbxref=Genbank:WP_002212095.1;Name=WP_002212095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212095.1;transl_table=11 NC_017265.1 RefSeq gene 50171 50689 . - . ID=gene39;Name=YPC_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00205;old_locus_tag=YPC_0044 NC_017265.1 Protein Homology CDS 50171 50689 . - 0 ID=cds33;Parent=gene39;Dbxref=Genbank:WP_002212097.1;Name=WP_002212097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212097.1;transl_table=11 NC_017265.1 RefSeq gene 51213 51710 . + . ID=gene40;Name=YPC_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00210;old_locus_tag=YPC_0045 NC_017265.1 Protein Homology CDS 51213 51710 . + 0 ID=cds34;Parent=gene40;Dbxref=Genbank:WP_002212098.1;Name=WP_002212098.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212098.1;transl_table=11 NC_017265.1 RefSeq gene 51778 53259 . + . ID=gene41;Name=YPC_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00215;old_locus_tag=YPC_0046 NC_017265.1 Protein Homology CDS 51778 53259 . + 0 ID=cds35;Parent=gene41;Dbxref=Genbank:WP_002212099.1;Name=WP_002212099.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212099.1;transl_table=11 NC_017265.1 RefSeq gene 53266 53706 . + . ID=gene42;Name=YPC_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00220;old_locus_tag=YPC_0047 NC_017265.1 Protein Homology CDS 53266 53706 . + 0 ID=cds36;Parent=gene42;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11 NC_017265.1 RefSeq gene 53706 54152 . + . ID=gene43;Name=YPC_RS00225;end_range=54152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS00225;old_locus_tag=YPC_0048;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 53706 54152 . + 0 ID=cds37;Parent=gene43;end_range=54152,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 54149 56107 . + . ID=id10;gbkey=repeat_region NC_017265.1 RefSeq gene 54238 55260 . + . ID=gene44;Name=YPC_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00230;old_locus_tag=YPC_0049 NC_017265.1 Protein Homology CDS 54238 55260 . + 0 ID=cds38;Parent=gene44;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 55260 56039 . + . ID=gene45;Name=YPC_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00235;old_locus_tag=YPC_0050 NC_017265.1 Protein Homology CDS 55260 56039 . + 0 ID=cds39;Parent=gene45;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 56106 56777 . + . ID=gene46;Name=YPC_RS00240;end_range=56777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS00240;partial=true;pseudo=true;start_range=.,56106 NC_017265.1 Protein Homology CDS 56106 56777 . + 0 ID=cds40;Parent=gene46;end_range=56777,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type VI secretion protein;pseudo=true;start_range=.,56106;transl_table=11 NC_017265.1 RefSeq repeat_region 56748 58273 . + . ID=id11;gbkey=repeat_region NC_017265.1 RefSeq gene 56781 57566 . - . ID=gene47;Name=YPC_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00245;old_locus_tag=YPC_0052 NC_017265.1 Protein Homology CDS 56781 57566 . - 0 ID=cds41;Parent=gene47;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_017265.1 RefSeq gene 57620 58135 . - . ID=gene48;Name=YPC_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00250 NC_017265.1 Protein Homology CDS 57620 58135 . - 0 ID=cds42;Parent=gene48;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_017265.1 RefSeq gene 58328 59086 . - . ID=gene49;Name=YPC_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00255;old_locus_tag=YPC_0054 NC_017265.1 Protein Homology CDS 58328 59086 . - 0 ID=cds43;Parent=gene49;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NC_017265.1 RefSeq gene 59121 59957 . - . ID=gene50;Name=YPC_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00260;old_locus_tag=YPC_0055 NC_017265.1 Protein Homology CDS 59121 59957 . - 0 ID=cds44;Parent=gene50;Dbxref=Genbank:WP_002216348.1;Name=WP_002216348.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_002216348.1;transl_table=11 NC_017265.1 RefSeq gene 59975 60304 . - . ID=gene51;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YPC_RS00265;old_locus_tag=YPC_0056 NC_017265.1 Protein Homology CDS 59975 60304 . - 0 ID=cds45;Parent=gene51;Dbxref=Genbank:WP_002218928.1;Name=WP_002218928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002218928.1;transl_table=11 NC_017265.1 RefSeq gene 60679 63390 . - . ID=gene52;Name=YPC_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00270;old_locus_tag=YPC_0057 NC_017265.1 Protein Homology CDS 60679 63390 . - 0 ID=cds46;Parent=gene52;Dbxref=Genbank:WP_002208926.1;Name=WP_002208926.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208926.1;transl_table=11 NC_017265.1 RefSeq gene 63708 64058 . + . ID=gene53;Name=YPC_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00275 NC_017265.1 GeneMarkS+ CDS 63708 64058 . + 0 ID=cds47;Parent=gene53;Dbxref=Genbank:WP_002215922.1;Name=WP_002215922.1;gbkey=CDS;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_002215922.1;transl_table=11 NC_017265.1 RefSeq gene 64088 66112 . + . ID=gene54;Name=YPC_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00280 NC_017265.1 Protein Homology CDS 64088 66112 . + 0 ID=cds48;Parent=gene54;Dbxref=Genbank:WP_002430067.1;Name=WP_002430067.1;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=WP_002430067.1;transl_table=11 NC_017265.1 RefSeq gene 66125 68221 . + . ID=gene55;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YPC_RS00285;old_locus_tag=YPC_0060 NC_017265.1 Protein Homology CDS 66125 68221 . + 0 ID=cds49;Parent=gene55;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NC_017265.1 RefSeq gene 68550 69125 . - . ID=gene56;Name=YPC_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00290;old_locus_tag=YPC_0062 NC_017265.1 Protein Homology CDS 68550 69125 . - 0 ID=cds50;Parent=gene56;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11 NC_017265.1 RefSeq gene 69185 69886 . - . ID=gene57;Name=YPC_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00295;old_locus_tag=YPC_0063 NC_017265.1 Protein Homology CDS 69185 69886 . - 0 ID=cds51;Parent=gene57;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11 NC_017265.1 RefSeq gene 69973 70749 . + . ID=gene58;Name=YPC_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00300;old_locus_tag=YPC_0064 NC_017265.1 Protein Homology CDS 69973 70749 . + 0 ID=cds52;Parent=gene58;Dbxref=Genbank:WP_002208922.1;Name=WP_002208922.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_002208922.1;transl_table=11 NC_017265.1 RefSeq gene 70919 71188 . + . ID=gene59;Name=YPC_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00305;old_locus_tag=YPC_0065 NC_017265.1 Protein Homology CDS 70919 71188 . + 0 ID=cds53;Parent=gene59;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11 NC_017265.1 RefSeq gene 71326 71583 . - . ID=gene60;Name=YPC_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00310;old_locus_tag=YPC_0066 NC_017265.1 Protein Homology CDS 71326 71583 . - 0 ID=cds54;Parent=gene60;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11 NC_017265.1 RefSeq gene 71619 73934 . - . ID=gene61;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YPC_RS00315;old_locus_tag=YPC_0067 NC_017265.1 Protein Homology CDS 71619 73934 . - 0 ID=cds55;Parent=gene61;Dbxref=Genbank:WP_002208919.1;Name=WP_002208919.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_002208919.1;transl_table=11 NC_017265.1 RefSeq gene 74026 74253 . - . ID=gene62;Name=YPC_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00320;old_locus_tag=YPC_0068 NC_017265.1 Protein Homology CDS 74026 74253 . - 0 ID=cds56;Parent=gene62;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11 NC_017265.1 RefSeq gene 74248 74394 . + . ID=gene63;Name=YPC_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00325;old_locus_tag=YPC_0069 NC_017265.1 Protein Homology CDS 74248 74394 . + 0 ID=cds57;Parent=gene63;Dbxref=Genbank:WP_002215925.1;Name=WP_002215925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215925.1;transl_table=11 NC_017265.1 RefSeq gene 74777 77152 . - . ID=gene64;Name=YPC_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00330;old_locus_tag=YPC_0070 NC_017265.1 Protein Homology CDS 74777 77152 . - 0 ID=cds58;Parent=gene64;Dbxref=Genbank:WP_002208916.1;Name=WP_002208916.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_002208916.1;transl_table=11 NC_017265.1 RefSeq gene 77686 78201 . + . ID=gene65;Name=YPC_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00335;old_locus_tag=YPC_0071 NC_017265.1 Protein Homology CDS 77686 78201 . + 0 ID=cds59;Parent=gene65;Dbxref=Genbank:WP_002208915.1;Name=WP_002208915.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NC_017265.1 RefSeq gene 78337 79056 . + . ID=gene66;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YPC_RS00340;old_locus_tag=YPC_0072 NC_017265.1 Protein Homology CDS 78337 79056 . + 0 ID=cds60;Parent=gene66;Dbxref=Genbank:WP_002208914.1;Name=WP_002208914.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_002208914.1;transl_table=11 NC_017265.1 RefSeq gene 79053 80405 . + . ID=gene67;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=YPC_RS00345;old_locus_tag=YPC_0073 NC_017265.1 Protein Homology CDS 79053 80405 . + 0 ID=cds61;Parent=gene67;Dbxref=Genbank:WP_002208913.1;Name=WP_002208913.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_002208913.1;transl_table=11 NC_017265.1 RefSeq gene 80540 82159 . - . ID=gene68;Name=YPC_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00350;old_locus_tag=YPC_0074 NC_017265.1 Protein Homology CDS 80540 82159 . - 0 ID=cds62;Parent=gene68;Dbxref=Genbank:WP_002208912.1;Name=WP_002208912.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_002208912.1;transl_table=11 NC_017265.1 RefSeq gene 82356 83237 . - . ID=gene69;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YPC_RS00355;old_locus_tag=YPC_0075 NC_017265.1 Protein Homology CDS 82356 83237 . - 0 ID=cds63;Parent=gene69;Dbxref=Genbank:WP_002208911.1;Name=WP_002208911.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_002208911.1;transl_table=11 NC_017265.1 RefSeq gene 83400 83807 . - . ID=gene70;Name=YPC_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00360;old_locus_tag=YPC_0076 NC_017265.1 Protein Homology CDS 83400 83807 . - 0 ID=cds64;Parent=gene70;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NC_017265.1 RefSeq gene 83836 84516 . - . ID=gene71;Name=YPC_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00365;old_locus_tag=YPC_0077 NC_017265.1 Protein Homology CDS 83836 84516 . - 0 ID=cds65;Parent=gene71;Dbxref=Genbank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;product=nucleotidase;protein_id=WP_002208909.1;transl_table=11 NC_017265.1 RefSeq gene 84660 86807 . - . ID=gene72;Name=YPC_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00370;old_locus_tag=YPC_0078 NC_017265.1 Protein Homology CDS 84660 86807 . - 0 ID=cds66;Parent=gene72;Dbxref=Genbank:WP_002208908.1;Name=WP_002208908.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_002208908.1;transl_table=11 NC_017265.1 RefSeq gene 87087 87281 . + . ID=gene73;Name=YPC_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00375 NC_017265.1 Protein Homology CDS 87087 87281 . + 0 ID=cds67;Parent=gene73;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11 NC_017265.1 RefSeq gene 87394 87939 . + . ID=gene74;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YPC_RS00380;old_locus_tag=YPC_0079 NC_017265.1 Protein Homology CDS 87394 87939 . + 0 ID=cds68;Parent=gene74;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11 NC_017265.1 RefSeq gene 88075 90630 . - . ID=gene75;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YPC_RS00385;old_locus_tag=YPC_0080 NC_017265.1 Protein Homology CDS 88075 90630 . - 0 ID=cds69;Parent=gene75;Dbxref=Genbank:WP_002208906.1;Name=WP_002208906.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_002208906.1;transl_table=11 NC_017265.1 RefSeq gene 90750 91646 . + . ID=gene76;Name=YPC_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00390;old_locus_tag=YPC_0081 NC_017265.1 Protein Homology CDS 90750 91646 . + 0 ID=cds70;Parent=gene76;Dbxref=Genbank:WP_002208905.1;Name=WP_002208905.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_002208905.1;transl_table=11 NC_017265.1 RefSeq gene 91646 92251 . + . ID=gene77;Name=YPC_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00395;old_locus_tag=YPC_0082 NC_017265.1 Protein Homology CDS 91646 92251 . + 0 ID=cds71;Parent=gene77;Dbxref=Genbank:WP_002208904.1;Name=WP_002208904.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_002208904.1;transl_table=11 NC_017265.1 RefSeq gene 92244 92825 . + . ID=gene78;Name=YPC_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00400 NC_017265.1 Protein Homology CDS 92244 92825 . + 0 ID=cds72;Parent=gene78;Dbxref=Genbank:WP_002217890.1;Name=WP_002217890.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217890.1;transl_table=11 NC_017265.1 RefSeq gene 92860 93219 . + . ID=gene79;Name=YPC_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00405 NC_017265.1 Protein Homology CDS 92860 93219 . + 0 ID=cds73;Parent=gene79;Dbxref=Genbank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223837.1;transl_table=11 NC_017265.1 RefSeq gene 93222 93611 . - . ID=gene80;Name=YPC_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00410;old_locus_tag=YPC_0085 NC_017265.1 Protein Homology CDS 93222 93611 . - 0 ID=cds74;Parent=gene80;Dbxref=Genbank:WP_002208901.1;Name=WP_002208901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208901.1;transl_table=11 NC_017265.1 RefSeq gene 93646 94770 . + . ID=gene81;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=YPC_RS00415 NC_017265.1 Protein Homology CDS 93646 94770 . + 0 ID=cds75;Parent=gene81;Dbxref=Genbank:WP_002228144.1;Name=WP_002228144.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_002228144.1;transl_table=11 NC_017265.1 RefSeq gene 95119 95640 . + . ID=gene82;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YPC_RS00420;old_locus_tag=YPC_0087 NC_017265.1 Protein Homology CDS 95119 95640 . + 0 ID=cds76;Parent=gene82;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11 NC_017265.1 RefSeq gene 95697 96785 . + . ID=gene83;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YPC_RS00425;old_locus_tag=YPC_0088 NC_017265.1 Protein Homology CDS 95697 96785 . + 0 ID=cds77;Parent=gene83;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NC_017265.1 RefSeq gene 97039 98028 . + . ID=gene84;Name=YPC_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00430;old_locus_tag=YPC_0089 NC_017265.1 Protein Homology CDS 97039 98028 . + 0 ID=cds78;Parent=gene84;Dbxref=Genbank:WP_002208897.1;Name=WP_002208897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208897.1;transl_table=11 NC_017265.1 RefSeq gene 98112 98927 . + . ID=gene85;Name=YPC_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00435;old_locus_tag=YPC_0090 NC_017265.1 Protein Homology CDS 98112 98927 . + 0 ID=cds79;Parent=gene85;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11 NC_017265.1 RefSeq gene 99230 99907 . + . ID=gene86;Name=YPC_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00440;old_locus_tag=YPC_0091 NC_017265.1 Protein Homology CDS 99230 99907 . + 0 ID=cds80;Parent=gene86;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NC_017265.1 RefSeq gene 99900 100598 . + . ID=gene87;Name=YPC_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00445;old_locus_tag=YPC_0092 NC_017265.1 Protein Homology CDS 99900 100598 . + 0 ID=cds81;Parent=gene87;Dbxref=Genbank:WP_002208892.1;Name=WP_002208892.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NC_017265.1 RefSeq gene 100600 101640 . + . ID=gene88;Name=YPC_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00450;old_locus_tag=YPC_0093 NC_017265.1 Protein Homology CDS 100600 101640 . + 0 ID=cds82;Parent=gene88;Dbxref=Genbank:WP_002208891.1;Name=WP_002208891.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_002208891.1;transl_table=11 NC_017265.1 RefSeq gene 101795 103207 . - . ID=gene89;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPC_RS00455;old_locus_tag=YPC_0094 NC_017265.1 Protein Homology CDS 101795 103207 . - 0 ID=cds83;Parent=gene89;Dbxref=Genbank:WP_002208890.1;Name=WP_002208890.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase 2;protein_id=WP_002208890.1;transl_table=11 NC_017265.1 RefSeq gene 103295 104101 . - . ID=gene90;Name=YPC_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00460;old_locus_tag=YPC_0095 NC_017265.1 Protein Homology CDS 103295 104101 . - 0 ID=cds84;Parent=gene90;Dbxref=Genbank:WP_002208888.1;Name=WP_002208888.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11 NC_017265.1 RefSeq gene 104316 104642 . - . ID=gene91;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YPC_RS00465;old_locus_tag=YPC_0097 NC_017265.1 Protein Homology CDS 104316 104642 . - 0 ID=cds85;Parent=gene91;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11 NC_017265.1 RefSeq gene 104639 107185 . - . ID=gene92;Name=YPC_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00470;old_locus_tag=YPC_0098 NC_017265.1 Protein Homology CDS 104639 107185 . - 0 ID=cds86;Parent=gene92;Dbxref=Genbank:WP_002208886.1;Name=WP_002208886.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_002208886.1;transl_table=11 NC_017265.1 RefSeq gene 107507 108805 . + . ID=gene93;Name=YPC_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00475;old_locus_tag=YPC_0100 NC_017265.1 Protein Homology CDS 107507 108805 . + 0 ID=cds87;Parent=gene93;Dbxref=Genbank:WP_002228747.1;Name=WP_002228747.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NC_017265.1 RefSeq gene 108890 110074 . - . ID=gene94;Name=YPC_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00480;old_locus_tag=YPC_0101 NC_017265.1 Protein Homology CDS 108890 110074 . - 0 ID=cds88;Parent=gene94;Dbxref=Genbank:WP_002215690.1;Name=WP_002215690.1;gbkey=CDS;product=protein TsgA;protein_id=WP_002215690.1;transl_table=11 NC_017265.1 RefSeq gene 110560 112620 . + . ID=gene95;Name=YPC_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00485;old_locus_tag=YPC_0102 NC_017265.1 Protein Homology CDS 110560 112620 . + 0 ID=cds89;Parent=gene95;Dbxref=Genbank:WP_002208882.1;Name=WP_002208882.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002208882.1;transl_table=11 NC_017265.1 RefSeq gene 112727 113713 . - . ID=gene96;Name=YPC_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00490;old_locus_tag=YPC_0103 NC_017265.1 Protein Homology CDS 112727 113713 . - 0 ID=cds90;Parent=gene96;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NC_017265.1 RefSeq gene 113962 115275 . - . ID=gene97;Name=YPC_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00495;old_locus_tag=YPC_0104 NC_017265.1 Protein Homology CDS 113962 115275 . - 0 ID=cds91;Parent=gene97;Dbxref=Genbank:WP_002208880.1;Name=WP_002208880.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002208880.1;transl_table=11 NC_017265.1 RefSeq gene 115791 116360 . + . ID=gene98;Name=YPC_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00500;old_locus_tag=YPC_0105 NC_017265.1 Protein Homology CDS 115791 116360 . + 0 ID=cds92;Parent=gene98;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11 NC_017265.1 RefSeq gene 116686 118227 . + . ID=gene99;Name=YPC_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00505;old_locus_tag=YPC_0106 NC_017265.1 Protein Homology CDS 116686 118227 . + 0 ID=cds93;Parent=gene99;Dbxref=Genbank:WP_002215686.1;Name=WP_002215686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215686.1;transl_table=11 NC_017265.1 RefSeq gene 118470 119045 . + . ID=gene100;Name=YPC_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00510;old_locus_tag=YPC_0107 NC_017265.1 Protein Homology CDS 118470 119045 . + 0 ID=cds94;Parent=gene100;Dbxref=Genbank:WP_002223842.1;Name=WP_002223842.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_002223842.1;transl_table=11 NC_017265.1 RefSeq gene 119178 120395 . + . ID=gene101;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YPC_RS00515;old_locus_tag=YPC_0108 NC_017265.1 Protein Homology CDS 119178 120395 . + 0 ID=cds95;Parent=gene101;Dbxref=Genbank:WP_002212295.1;Name=WP_002212295.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=WP_002212295.1;transl_table=11 NC_017265.1 RefSeq repeat_region 120432 120601 . + . ID=id12;gbkey=repeat_region NC_017265.1 RefSeq gene 120621 122741 . - . ID=gene102;Name=YPC_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00520;old_locus_tag=YPC_0110 NC_017265.1 Protein Homology CDS 120621 122741 . - 0 ID=cds96;Parent=gene102;Dbxref=Genbank:WP_002212296.1;Name=WP_002212296.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212296.1;transl_table=11 NC_017265.1 RefSeq gene 122827 123459 . - . ID=gene103;Name=YPC_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00525;old_locus_tag=YPC_0111 NC_017265.1 Protein Homology CDS 122827 123459 . - 0 ID=cds97;Parent=gene103;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11 NC_017265.1 RefSeq gene 123795 124202 . + . ID=gene104;Name=YPC_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00530;old_locus_tag=YPC_0112 NC_017265.1 Protein Homology CDS 123795 124202 . + 0 ID=cds98;Parent=gene104;Dbxref=Genbank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212298.1;transl_table=11 NC_017265.1 RefSeq gene 124274 124705 . + . ID=gene105;Name=YPC_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00535;old_locus_tag=YPC_0113 NC_017265.1 Protein Homology CDS 124274 124705 . + 0 ID=cds99;Parent=gene105;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11 NC_017265.1 RefSeq gene 124883 125752 . - . ID=gene106;Name=YPC_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00540;old_locus_tag=YPC_0114 NC_017265.1 Protein Homology CDS 124883 125752 . - 0 ID=cds100;Parent=gene106;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NC_017265.1 RefSeq gene 125901 126137 . - . ID=gene107;Name=YPC_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00545;old_locus_tag=YPC_0115 NC_017265.1 Protein Homology CDS 125901 126137 . - 0 ID=cds101;Parent=gene107;Dbxref=Genbank:WP_002212301.1;Name=WP_002212301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212301.1;transl_table=11 NC_017265.1 RefSeq gene 126134 127114 . - . ID=gene108;Name=YPC_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00550;old_locus_tag=YPC_0116 NC_017265.1 Protein Homology CDS 126134 127114 . - 0 ID=cds102;Parent=gene108;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NC_017265.1 RefSeq gene 127287 127817 . + . ID=gene109;Name=YPC_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00555;old_locus_tag=YPC_0117 NC_017265.1 Protein Homology CDS 127287 127817 . + 0 ID=cds103;Parent=gene109;Dbxref=Genbank:WP_042468754.1;Name=WP_042468754.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_042468754.1;transl_table=11 NC_017265.1 RefSeq gene 128020 129081 . + . ID=gene110;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YPC_RS00560;old_locus_tag=YPC_0119 NC_017265.1 Protein Homology CDS 128020 129081 . + 0 ID=cds104;Parent=gene110;Dbxref=Genbank:WP_002212305.1;Name=WP_002212305.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_002212305.1;transl_table=11 NC_017265.1 RefSeq gene 129090 129857 . + . ID=gene111;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YPC_RS00565;old_locus_tag=YPC_0120 NC_017265.1 Protein Homology CDS 129090 129857 . + 0 ID=cds105;Parent=gene111;Dbxref=Genbank:WP_002212307.1;Name=WP_002212307.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_002212307.1;transl_table=11 NC_017265.1 RefSeq gene 129854 130708 . + . ID=gene112;Name=YPC_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00570;old_locus_tag=YPC_0121 NC_017265.1 Protein Homology CDS 129854 130708 . + 0 ID=cds106;Parent=gene112;Dbxref=Genbank:WP_002212309.1;Name=WP_002212309.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_002212309.1;transl_table=11 NC_017265.1 RefSeq gene 130705 131553 . + . ID=gene113;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YPC_RS00575;old_locus_tag=YPC_0122 NC_017265.1 Protein Homology CDS 130705 131553 . + 0 ID=cds107;Parent=gene113;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NC_017265.1 RefSeq gene 131566 132546 . - . ID=gene114;Name=YPC_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00580;old_locus_tag=YPC_0123 NC_017265.1 Protein Homology CDS 131566 132546 . - 0 ID=cds108;Parent=gene114;Dbxref=Genbank:WP_002212311.1;Name=WP_002212311.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212311.1;transl_table=11 NC_017265.1 RefSeq gene 132639 133628 . - . ID=gene115;Name=YPC_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00585;old_locus_tag=YPC_0124 NC_017265.1 Protein Homology CDS 132639 133628 . - 0 ID=cds109;Parent=gene115;Dbxref=Genbank:WP_002212312.1;Name=WP_002212312.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212312.1;transl_table=11 NC_017265.1 RefSeq gene 133763 135681 . - . ID=gene116;Name=YPC_RS00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS00590;pseudo=true NC_017265.1 Protein Homology CDS 133763 135681 . - 0 ID=cds110;Parent=gene116;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 135932 136480 . + . ID=gene117;Name=YPC_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00595;old_locus_tag=YPC_0127 NC_017265.1 Protein Homology CDS 135932 136480 . + 0 ID=cds111;Parent=gene117;Dbxref=Genbank:WP_002215966.1;Name=WP_002215966.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NC_017265.1 RefSeq gene 136484 138292 . + . ID=gene118;Name=YPC_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00600;old_locus_tag=YPC_0128 NC_017265.1 Protein Homology CDS 136484 138292 . + 0 ID=cds112;Parent=gene118;Dbxref=Genbank:WP_002212314.1;Name=WP_002212314.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_002212314.1;transl_table=11 NC_017265.1 RefSeq gene 138308 138529 . + . ID=gene119;Name=YPC_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00605;old_locus_tag=YPC_0129 NC_017265.1 Protein Homology CDS 138308 138529 . + 0 ID=cds113;Parent=gene119;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11 NC_017265.1 RefSeq gene 138624 139211 . + . ID=gene120;Name=YPC_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00610;old_locus_tag=YPC_0130 NC_017265.1 Protein Homology CDS 138624 139211 . + 0 ID=cds114;Parent=gene120;Dbxref=Genbank:WP_002212316.1;Name=WP_002212316.1;Note=rotamase;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212316.1;transl_table=11 NC_017265.1 RefSeq gene 139432 139650 . - . ID=gene121;Name=YPC_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00615;old_locus_tag=YPC_0132 NC_017265.1 Protein Homology CDS 139432 139650 . - 0 ID=cds115;Parent=gene121;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NC_017265.1 RefSeq gene 139965 140765 . + . ID=gene122;Name=YPC_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00620;old_locus_tag=YPC_0133 NC_017265.1 Protein Homology CDS 139965 140765 . + 0 ID=cds116;Parent=gene122;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NC_017265.1 RefSeq gene 141019 141741 . + . ID=gene123;Name=YPC_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00625;old_locus_tag=YPC_0134 NC_017265.1 Protein Homology CDS 141019 141741 . + 0 ID=cds117;Parent=gene123;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11 NC_017265.1 RefSeq gene 141741 142136 . + . ID=gene124;Name=YPC_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00630;old_locus_tag=YPC_0135 NC_017265.1 Protein Homology CDS 141741 142136 . + 0 ID=cds118;Parent=gene124;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11 NC_017265.1 RefSeq gene 142136 142501 . + . ID=gene125;Name=YPC_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00635;old_locus_tag=YPC_0136 NC_017265.1 Protein Homology CDS 142136 142501 . + 0 ID=cds119;Parent=gene125;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11 NC_017265.1 RefSeq gene 142521 142808 . + . ID=gene126;Name=YPC_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00640;old_locus_tag=YPC_0137 NC_017265.1 Protein Homology CDS 142521 142808 . + 0 ID=cds120;Parent=gene126;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11 NC_017265.1 RefSeq gene 142946 143320 . + . ID=gene127;Name=YPC_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00645;old_locus_tag=YPC_0138 NC_017265.1 Protein Homology CDS 142946 143320 . + 0 ID=cds121;Parent=gene127;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NC_017265.1 RefSeq gene 143417 143887 . + . ID=gene128;Name=YPC_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00650;old_locus_tag=YPC_0139 NC_017265.1 Protein Homology CDS 143417 143887 . + 0 ID=cds122;Parent=gene128;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NC_017265.1 RefSeq gene 143981 146089 . + . ID=gene129;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YPC_RS00655;old_locus_tag=YPC_0140 NC_017265.1 Protein Homology CDS 143981 146089 . + 0 ID=cds123;Parent=gene129;Dbxref=Genbank:WP_014501251.1;Name=WP_014501251.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_014501251.1;transl_table=11 NC_017265.1 RefSeq gene 146162 147346 . + . ID=gene130;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPC_RS00660;old_locus_tag=YPC_0141 NC_017265.1 Protein Homology CDS 146162 147346 . + 0 ID=cds124;Parent=gene130;Dbxref=Genbank:WP_002212326.1;Name=WP_002212326.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NC_017265.1 RefSeq repeat_region 147396 148124 . + . ID=id13;gbkey=repeat_region NC_017265.1 RefSeq region 147404 148113 . + . ID=id14;Dbxref=ASAP:BBE-0004897,ERIC:BBE-0004897;Note=IS1541A.1;gbkey=mobile_element NC_017265.1 RefSeq gene 147549 148007 . + . ID=gene131;Name=YPC_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00665;old_locus_tag=YPC_0144 NC_017265.1 Protein Homology CDS 147549 148007 . + 0 ID=cds125;Parent=gene131;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 148195 148389 . + . ID=gene132;Name=YPC_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00670;old_locus_tag=YPC_0145 NC_017265.1 Protein Homology CDS 148195 148389 . + 0 ID=cds126;Parent=gene132;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NC_017265.1 RefSeq gene 148468 148941 . + . ID=gene133;Name=YPC_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00675;old_locus_tag=YPC_0146 NC_017265.1 Protein Homology CDS 148468 148941 . + 0 ID=cds127;Parent=gene133;Dbxref=Genbank:WP_002212327.1;Name=WP_002212327.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_002212327.1;transl_table=11 NC_017265.1 RefSeq gene 149355 149666 . + . ID=gene134;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YPC_RS00680;old_locus_tag=YPC_0147 NC_017265.1 Protein Homology CDS 149355 149666 . + 0 ID=cds128;Parent=gene134;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NC_017265.1 RefSeq gene 149699 150328 . + . ID=gene135;Name=YPC_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00685;old_locus_tag=YPC_0148 NC_017265.1 Protein Homology CDS 149699 150328 . + 0 ID=cds129;Parent=gene135;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NC_017265.1 RefSeq gene 150345 150950 . + . ID=gene136;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YPC_RS00690;old_locus_tag=YPC_0149 NC_017265.1 Protein Homology CDS 150345 150950 . + 0 ID=cds130;Parent=gene136;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NC_017265.1 RefSeq gene 150947 151249 . + . ID=gene137;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YPC_RS00695;old_locus_tag=YPC_0150 NC_017265.1 Protein Homology CDS 150947 151249 . + 0 ID=cds131;Parent=gene137;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NC_017265.1 RefSeq gene 151266 152090 . + . ID=gene138;Name=YPC_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00700;old_locus_tag=YPC_0151 NC_017265.1 Protein Homology CDS 151266 152090 . + 0 ID=cds132;Parent=gene138;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NC_017265.1 RefSeq gene 152105 152383 . + . ID=gene139;Name=YPC_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00705;old_locus_tag=YPC_0152 NC_017265.1 Protein Homology CDS 152105 152383 . + 0 ID=cds133;Parent=gene139;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NC_017265.1 RefSeq gene 152398 152730 . + . ID=gene140;Name=YPC_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00710;old_locus_tag=YPC_0153 NC_017265.1 Protein Homology CDS 152398 152730 . + 0 ID=cds134;Parent=gene140;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NC_017265.1 RefSeq gene 152748 153446 . + . ID=gene141;Name=YPC_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00715;old_locus_tag=YPC_0154 NC_017265.1 Protein Homology CDS 152748 153446 . + 0 ID=cds135;Parent=gene141;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NC_017265.1 RefSeq gene 153459 153869 . + . ID=gene142;Name=YPC_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00720;old_locus_tag=YPC_0155 NC_017265.1 Protein Homology CDS 153459 153869 . + 0 ID=cds136;Parent=gene142;Dbxref=Genbank:WP_002218940.1;Name=WP_002218940.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11 NC_017265.1 RefSeq gene 153869 154060 . + . ID=gene143;Name=YPC_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00725;old_locus_tag=YPC_0156 NC_017265.1 Protein Homology CDS 153869 154060 . + 0 ID=cds137;Parent=gene143;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NC_017265.1 RefSeq gene 154060 154314 . + . ID=gene144;Name=YPC_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00730;old_locus_tag=YPC_0157 NC_017265.1 Protein Homology CDS 154060 154314 . + 0 ID=cds138;Parent=gene144;Dbxref=Genbank:WP_002228135.1;Name=WP_002228135.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NC_017265.1 RefSeq gene 154495 154866 . + . ID=gene145;Name=YPC_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00735;old_locus_tag=YPC_0158 NC_017265.1 Protein Homology CDS 154495 154866 . + 0 ID=cds139;Parent=gene145;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NC_017265.1 RefSeq gene 154877 155191 . + . ID=gene146;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YPC_RS00740;old_locus_tag=YPC_0159 NC_017265.1 Protein Homology CDS 154877 155191 . + 0 ID=cds140;Parent=gene146;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NC_017265.1 RefSeq gene 155206 155745 . + . ID=gene147;Name=YPC_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00745;old_locus_tag=YPC_0160 NC_017265.1 Protein Homology CDS 155206 155745 . + 0 ID=cds141;Parent=gene147;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NC_017265.1 RefSeq gene 155759 156064 . + . ID=gene148;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YPC_RS00750;old_locus_tag=YPC_0161 NC_017265.1 Protein Homology CDS 155759 156064 . + 0 ID=cds142;Parent=gene148;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NC_017265.1 RefSeq gene 156098 156490 . + . ID=gene149;Name=YPC_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00755;old_locus_tag=YPC_0162 NC_017265.1 Protein Homology CDS 156098 156490 . + 0 ID=cds143;Parent=gene149;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NC_017265.1 RefSeq gene 156505 157038 . + . ID=gene150;Name=YPC_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00760;old_locus_tag=YPC_0163 NC_017265.1 Protein Homology CDS 156505 157038 . + 0 ID=cds144;Parent=gene150;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NC_017265.1 RefSeq gene 157048 157401 . + . ID=gene151;Name=YPC_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00765;old_locus_tag=YPC_0164 NC_017265.1 Protein Homology CDS 157048 157401 . + 0 ID=cds145;Parent=gene151;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NC_017265.1 RefSeq gene 157416 157919 . + . ID=gene152;Name=YPC_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00770;old_locus_tag=YPC_0165 NC_017265.1 Protein Homology CDS 157416 157919 . + 0 ID=cds146;Parent=gene152;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NC_017265.1 RefSeq gene 157922 158101 . + . ID=gene153;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YPC_RS00775;old_locus_tag=YPC_0166 NC_017265.1 Protein Homology CDS 157922 158101 . + 0 ID=cds147;Parent=gene153;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NC_017265.1 RefSeq gene 158105 158539 . + . ID=gene154;Name=YPC_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00780;old_locus_tag=YPC_0167 NC_017265.1 Protein Homology CDS 158105 158539 . + 0 ID=cds148;Parent=gene154;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NC_017265.1 RefSeq gene 158547 159878 . + . ID=gene155;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=YPC_RS00785;old_locus_tag=YPC_0168 NC_017265.1 Protein Homology CDS 158547 159878 . + 0 ID=cds149;Parent=gene155;Dbxref=Genbank:WP_002213344.1;Name=WP_002213344.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NC_017265.1 RefSeq gene 159912 160028 . + . ID=gene156;Name=YPC_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00790;old_locus_tag=YPC_0169 NC_017265.1 Protein Homology CDS 159912 160028 . + 0 ID=cds150;Parent=gene156;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NC_017265.1 RefSeq gene 160176 160532 . + . ID=gene157;Name=YPC_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00795;old_locus_tag=YPC_0170 NC_017265.1 Protein Homology CDS 160176 160532 . + 0 ID=cds151;Parent=gene157;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NC_017265.1 RefSeq gene 160549 160938 . + . ID=gene158;Name=YPC_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00800;old_locus_tag=YPC_0171 NC_017265.1 Protein Homology CDS 160549 160938 . + 0 ID=cds152;Parent=gene158;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NC_017265.1 RefSeq gene 160969 161589 . + . ID=gene159;Name=YPC_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00805;old_locus_tag=YPC_0172 NC_017265.1 Protein Homology CDS 160969 161589 . + 0 ID=cds153;Parent=gene159;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NC_017265.1 RefSeq gene 161615 162604 . + . ID=gene160;Name=YPC_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00810;old_locus_tag=YPC_0173 NC_017265.1 Protein Homology CDS 161615 162604 . + 0 ID=cds154;Parent=gene160;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NC_017265.1 RefSeq gene 162645 163034 . + . ID=gene161;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YPC_RS00815;old_locus_tag=YPC_0174 NC_017265.1 Protein Homology CDS 162645 163034 . + 0 ID=cds155;Parent=gene161;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NC_017265.1 RefSeq gene 163481 163906 . + . ID=gene162;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YPC_RS00820;old_locus_tag=YPC_0175 NC_017265.1 Protein Homology CDS 163481 163906 . + 0 ID=cds156;Parent=gene162;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NC_017265.1 RefSeq gene 163994 164194 . + . ID=gene163;Name=YPC_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00825;old_locus_tag=YPC_0176 NC_017265.1 Protein Homology CDS 163994 164194 . + 0 ID=cds157;Parent=gene163;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11 NC_017265.1 RefSeq gene 164304 164717 . - . ID=gene164;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YPC_RS00830;old_locus_tag=YPC_0177 NC_017265.1 Protein Homology CDS 164304 164717 . - 0 ID=cds158;Parent=gene164;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11 NC_017265.1 RefSeq gene 164856 166232 . - . ID=gene165;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=YPC_RS00835;old_locus_tag=YPC_0178 NC_017265.1 Protein Homology CDS 164856 166232 . - 0 ID=cds159;Parent=gene165;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11 NC_017265.1 RefSeq gene 166288 167577 . - . ID=gene166;Name=YPC_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00840;old_locus_tag=YPC_0179 NC_017265.1 Protein Homology CDS 166288 167577 . - 0 ID=cds160;Parent=gene166;Dbxref=Genbank:WP_002215705.1;Name=WP_002215705.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_002215705.1;transl_table=11 NC_017265.1 RefSeq gene 167671 168618 . - . ID=gene167;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YPC_RS00845;old_locus_tag=YPC_0180 NC_017265.1 Protein Homology CDS 167671 168618 . - 0 ID=cds161;Parent=gene167;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NC_017265.1 RefSeq gene 168643 169155 . - . ID=gene168;Name=YPC_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00850;old_locus_tag=YPC_0181 NC_017265.1 Protein Homology CDS 168643 169155 . - 0 ID=cds162;Parent=gene168;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NC_017265.1 RefSeq gene 169290 170411 . + . ID=gene169;Name=YPC_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00855;old_locus_tag=YPC_0182 NC_017265.1 Protein Homology CDS 169290 170411 . + 0 ID=cds163;Parent=gene169;Dbxref=Genbank:WP_002209022.1;Name=WP_002209022.1;gbkey=CDS;product=DNA processing protein DprA;protein_id=WP_002209022.1;transl_table=11 NC_017265.1 RefSeq gene 170383 170856 . + . ID=gene170;Name=YPC_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00860;old_locus_tag=YPC_0183 NC_017265.1 Protein Homology CDS 170383 170856 . + 0 ID=cds164;Parent=gene170;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11 NC_017265.1 RefSeq gene 170897 171436 . + . ID=gene171;Name=YPC_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00865;old_locus_tag=YPC_0184 NC_017265.1 Protein Homology CDS 170897 171436 . + 0 ID=cds165;Parent=gene171;Dbxref=Genbank:WP_002228134.1;Name=WP_002228134.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228134.1;transl_table=11 NC_017265.1 RefSeq gene 171438 172010 . + . ID=gene172;Name=YPC_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00870;old_locus_tag=YPC_0185 NC_017265.1 Protein Homology CDS 171438 172010 . + 0 ID=cds166;Parent=gene172;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11 NC_017265.1 RefSeq gene 172019 172840 . + . ID=gene173;Name=YPC_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00875;old_locus_tag=YPC_0186 NC_017265.1 Protein Homology CDS 172019 172840 . + 0 ID=cds167;Parent=gene173;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11 NC_017265.1 RefSeq gene 172895 173380 . - . ID=gene174;Name=YPC_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00880;old_locus_tag=YPC_0187 NC_017265.1 Protein Homology CDS 172895 173380 . - 0 ID=cds168;Parent=gene174;Dbxref=Genbank:WP_002215709.1;Name=WP_002215709.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002215709.1;transl_table=11 NC_017265.1 RefSeq repeat_region 173424 175382 . + . ID=id15;gbkey=repeat_region NC_017265.1 RefSeq gene 173492 174271 . - . ID=gene175;Name=YPC_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00885;old_locus_tag=YPC_0188 NC_017265.1 Protein Homology CDS 173492 174271 . - 0 ID=cds169;Parent=gene175;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 174271 175293 . - . ID=gene176;Name=YPC_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00890;old_locus_tag=YPC_0189 NC_017265.1 Protein Homology CDS 174271 175293 . - 0 ID=cds170;Parent=gene176;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 175563 176486 . + . ID=gene177;Name=YPC_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00895;old_locus_tag=YPC_0190 NC_017265.1 Protein Homology CDS 175563 176486 . + 0 ID=cds171;Parent=gene177;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11 NC_017265.1 RefSeq gene 176621 178330 . - . ID=gene178;Name=YPC_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00900;old_locus_tag=YPC_0191 NC_017265.1 Protein Homology CDS 176621 178330 . - 0 ID=cds172;Parent=gene178;Dbxref=Genbank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209007.1;transl_table=11 NC_017265.1 RefSeq gene 178478 179863 . - . ID=gene179;Name=YPC_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00905;old_locus_tag=YPC_0193 NC_017265.1 Protein Homology CDS 178478 179863 . - 0 ID=cds173;Parent=gene179;Dbxref=Genbank:WP_002209006.1;Name=WP_002209006.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease;protein_id=WP_002209006.1;transl_table=11 NC_017265.1 RefSeq gene 180101 181315 . + . ID=gene180;Name=YPC_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00910;old_locus_tag=YPC_0194 NC_017265.1 Protein Homology CDS 180101 181315 . + 0 ID=cds174;Parent=gene180;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11 NC_017265.1 RefSeq repeat_region 181413 181592 . + . ID=id16;gbkey=repeat_region NC_017265.1 RefSeq gene 181681 183762 . - . ID=gene181;Name=YPC_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00915;old_locus_tag=YPC_0196 NC_017265.1 Protein Homology CDS 181681 183762 . - 0 ID=cds175;Parent=gene181;Dbxref=Genbank:WP_002209004.1;Name=WP_002209004.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NC_017265.1 RefSeq gene 183763 184422 . - . ID=gene182;Name=YPC_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00920;old_locus_tag=YPC_0197 NC_017265.1 Protein Homology CDS 183763 184422 . - 0 ID=cds176;Parent=gene182;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11 NC_017265.1 RefSeq gene 184461 186569 . - . ID=gene183;Name=YPC_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00925;old_locus_tag=YPC_0198 NC_017265.1 Protein Homology CDS 184461 186569 . - 0 ID=cds177;Parent=gene183;Dbxref=Genbank:WP_002209002.1;Name=WP_002209002.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NC_017265.1 RefSeq gene 186589 186864 . - . ID=gene184;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YPC_RS00930;old_locus_tag=YPC_0199 NC_017265.1 Protein Homology CDS 186589 186864 . - 0 ID=cds178;Parent=gene184;Dbxref=Genbank:WP_002209001.1;Name=WP_002209001.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002209001.1;transl_table=11 NC_017265.1 RefSeq gene 186919 187542 . - . ID=gene185;Name=YPC_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00935;old_locus_tag=YPC_0200 NC_017265.1 Protein Homology CDS 186919 187542 . - 0 ID=cds179;Parent=gene185;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NC_017265.1 RefSeq gene 187943 189646 . + . ID=gene186;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=YPC_RS00940;old_locus_tag=YPC_0201 NC_017265.1 Protein Homology CDS 187943 189646 . + 0 ID=cds180;Parent=gene186;Dbxref=Genbank:WP_002215674.1;Name=WP_002215674.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_002215674.1;transl_table=11 NC_017265.1 RefSeq gene 189659 190282 . - . ID=gene187;Name=YPC_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00945;old_locus_tag=YPC_0202 NC_017265.1 Protein Homology CDS 189659 190282 . - 0 ID=cds181;Parent=gene187;Dbxref=Genbank:WP_002215676.1;Name=WP_002215676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215676.1;transl_table=11 NC_017265.1 RefSeq gene 190685 191548 . - . ID=gene188;Name=YPC_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00950;old_locus_tag=YPC_0203 NC_017265.1 Protein Homology CDS 190685 191548 . - 0 ID=cds182;Parent=gene188;Dbxref=Genbank:WP_002208998.1;Name=WP_002208998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208998.1;transl_table=11 NC_017265.1 RefSeq gene 191675 192391 . + . ID=gene189;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YPC_RS00955;old_locus_tag=YPC_0204 NC_017265.1 Protein Homology CDS 191675 192391 . + 0 ID=cds183;Parent=gene189;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NC_017265.1 RefSeq gene 192558 193205 . + . ID=gene190;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YPC_RS00960;old_locus_tag=YPC_0205 NC_017265.1 Protein Homology CDS 192558 193205 . + 0 ID=cds184;Parent=gene190;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NC_017265.1 RefSeq gene 193340 193936 . - . ID=gene191;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=YPC_RS00965;old_locus_tag=YPC_0206 NC_017265.1 Protein Homology CDS 193340 193936 . - 0 ID=cds185;Parent=gene191;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NC_017265.1 RefSeq gene 194058 194516 . - . ID=gene192;Name=YPC_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00970;old_locus_tag=YPC_0207 NC_017265.1 Protein Homology CDS 194058 194516 . - 0 ID=cds186;Parent=gene192;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11 NC_017265.1 RefSeq gene 194494 195711 . - . ID=gene193;Name=YPC_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00975;old_locus_tag=YPC_0208 NC_017265.1 Protein Homology CDS 194494 195711 . - 0 ID=cds187;Parent=gene193;Dbxref=Genbank:WP_002208993.1;Name=WP_002208993.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002208993.1;transl_table=11 NC_017265.1 RefSeq gene 195905 196573 . + . ID=gene194;Name=YPC_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00980;old_locus_tag=YPC_0209 NC_017265.1 Protein Homology CDS 195905 196573 . + 0 ID=cds188;Parent=gene194;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11 NC_017265.1 RefSeq gene 196836 197072 . + . ID=gene195;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YPC_RS00985;old_locus_tag=YPC_0210 NC_017265.1 Protein Homology CDS 196836 197072 . + 0 ID=cds189;Parent=gene195;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NC_017265.1 RefSeq gene 197084 197251 . + . ID=gene196;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YPC_RS00990;old_locus_tag=YPC_0211 NC_017265.1 Protein Homology CDS 197084 197251 . + 0 ID=cds190;Parent=gene196;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NC_017265.1 RefSeq gene 197334 198143 . + . ID=gene197;Name=YPC_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS00995;old_locus_tag=YPC_0212 NC_017265.1 Protein Homology CDS 197334 198143 . + 0 ID=cds191;Parent=gene197;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11 NC_017265.1 RefSeq gene 198149 198628 . - . ID=gene198;Name=YPC_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01000;old_locus_tag=YPC_0213 NC_017265.1 Protein Homology CDS 198149 198628 . - 0 ID=cds192;Parent=gene198;Dbxref=Genbank:WP_002208988.1;Name=WP_002208988.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_002208988.1;transl_table=11 NC_017265.1 RefSeq gene 198625 199407 . - . ID=gene199;Name=YPC_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01005;old_locus_tag=YPC_0214 NC_017265.1 Protein Homology CDS 198625 199407 . - 0 ID=cds193;Parent=gene199;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11 NC_017265.1 RefSeq gene 199408 200685 . - . ID=gene200;Name=YPC_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01010;old_locus_tag=YPC_0215 NC_017265.1 Protein Homology CDS 199408 200685 . - 0 ID=cds194;Parent=gene200;Dbxref=Genbank:WP_002208986.1;Name=WP_002208986.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NC_017265.1 RefSeq gene 201105 202070 . - . ID=gene201;Name=YPC_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01015;old_locus_tag=YPC_0216 NC_017265.1 Protein Homology CDS 201105 202070 . - 0 ID=cds195;Parent=gene201;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11 NC_017265.1 RefSeq gene 202070 203134 . - . ID=gene202;Name=YPC_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01020;old_locus_tag=YPC_0217 NC_017265.1 Protein Homology CDS 202070 203134 . - 0 ID=cds196;Parent=gene202;Dbxref=Genbank:WP_002208984.1;Name=WP_002208984.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208984.1;transl_table=11 NC_017265.1 RefSeq gene 203165 204097 . - . ID=gene203;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YPC_RS01025;old_locus_tag=YPC_0218 NC_017265.1 Protein Homology CDS 203165 204097 . - 0 ID=cds197;Parent=gene203;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11 NC_017265.1 RefSeq gene 204343 205554 . + . ID=gene204;Name=YPC_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01030;old_locus_tag=YPC_0219 NC_017265.1 Protein Homology CDS 204343 205554 . + 0 ID=cds198;Parent=gene204;Dbxref=Genbank:WP_002208982.1;Name=WP_002208982.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_002208982.1;transl_table=11 NC_017265.1 RefSeq gene 205564 206589 . + . ID=gene205;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YPC_RS01035;old_locus_tag=YPC_0220 NC_017265.1 Protein Homology CDS 205564 206589 . + 0 ID=cds199;Parent=gene205;Dbxref=Genbank:WP_002208981.1;Name=WP_002208981.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_002208981.1;transl_table=11 NC_017265.1 RefSeq gene 206727 207661 . - . ID=gene206;Name=YPC_RS01040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS01040;pseudo=true NC_017265.1 Protein Homology CDS 206727 207661 . - 0 ID=cds200;Parent=gene206;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar deacetylase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 207685 209055 . - . ID=gene207;Name=YPC_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01045;old_locus_tag=YPC_0223 NC_017265.1 Protein Homology CDS 207685 209055 . - 0 ID=cds201;Parent=gene207;Dbxref=Genbank:WP_002208980.1;Name=WP_002208980.1;gbkey=CDS;product=peptidase M37;protein_id=WP_002208980.1;transl_table=11 NC_017265.1 RefSeq gene 209065 210612 . - . ID=gene208;Name=YPC_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01050;old_locus_tag=YPC_0224 NC_017265.1 Protein Homology CDS 209065 210612 . - 0 ID=cds202;Parent=gene208;Dbxref=Genbank:WP_002208979.1;Name=WP_002208979.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002208979.1;transl_table=11 NC_017265.1 RefSeq gene 211009 211443 . + . ID=gene209;Name=YPC_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01055;old_locus_tag=YPC_0225 NC_017265.1 Protein Homology CDS 211009 211443 . + 0 ID=cds203;Parent=gene209;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11 NC_017265.1 RefSeq gene 211562 211810 . + . ID=gene210;Name=YPC_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01060;old_locus_tag=YPC_0226 NC_017265.1 Protein Homology CDS 211562 211810 . + 0 ID=cds204;Parent=gene210;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11 NC_017265.1 RefSeq gene 211898 212374 . + . ID=gene211;Name=YPC_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01065;old_locus_tag=YPC_0227 NC_017265.1 Protein Homology CDS 211898 212374 . + 0 ID=cds205;Parent=gene211;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11 NC_017265.1 RefSeq gene 212374 213393 . + . ID=gene212;Name=YPC_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01070;old_locus_tag=YPC_0228 NC_017265.1 Protein Homology CDS 212374 213393 . + 0 ID=cds206;Parent=gene212;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11 NC_017265.1 RefSeq gene 213453 213593 . + . ID=gene213;Name=YPC_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01075;old_locus_tag=YPC_0229 NC_017265.1 Protein Homology CDS 213453 213593 . + 0 ID=cds207;Parent=gene213;Dbxref=Genbank:WP_002228146.1;Name=WP_002228146.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228146.1;transl_table=11 NC_017265.1 RefSeq gene 213659 214480 . + . ID=gene214;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YPC_RS01080;old_locus_tag=YPC_0230 NC_017265.1 Protein Homology CDS 213659 214480 . + 0 ID=cds208;Parent=gene214;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NC_017265.1 RefSeq gene 214603 215091 . - . ID=gene215;Name=YPC_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01085;old_locus_tag=YPC_0231 NC_017265.1 Protein Homology CDS 214603 215091 . - 0 ID=cds209;Parent=gene215;Dbxref=Genbank:WP_002208973.1;Name=WP_002208973.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_002208973.1;transl_table=11 NC_017265.1 RefSeq gene 215280 216344 . + . ID=gene216;Name=YPC_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01090;old_locus_tag=YPC_0232 NC_017265.1 Protein Homology CDS 215280 216344 . + 0 ID=cds210;Parent=gene216;Dbxref=Genbank:WP_002208972.1;Name=WP_002208972.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_002208972.1;transl_table=11 NC_017265.1 RefSeq gene 216393 217769 . - . ID=gene217;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YPC_RS01095;old_locus_tag=YPC_0233 NC_017265.1 Protein Homology CDS 216393 217769 . - 0 ID=cds211;Parent=gene217;Dbxref=Genbank:WP_002208971.1;Name=WP_002208971.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_002208971.1;transl_table=11 NC_017265.1 RefSeq gene 217766 218464 . - . ID=gene218;Name=YPC_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01100;old_locus_tag=YPC_0234 NC_017265.1 Protein Homology CDS 217766 218464 . - 0 ID=cds212;Parent=gene218;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11 NC_017265.1 RefSeq gene 218638 219126 . + . ID=gene219;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YPC_RS01105;old_locus_tag=YPC_0235 NC_017265.1 Protein Homology CDS 218638 219126 . + 0 ID=cds213;Parent=gene219;Dbxref=Genbank:WP_002208969.1;Name=WP_002208969.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_002208969.1;transl_table=11 NC_017265.1 RefSeq gene 219804 220763 . + . ID=gene220;Name=YPC_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01110;old_locus_tag=YPC_0237 NC_017265.1 Protein Homology CDS 219804 220763 . + 0 ID=cds214;Parent=gene220;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11 NC_017265.1 RefSeq gene 221325 222227 . + . ID=gene221;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=YPC_RS01115;old_locus_tag=YPC_0239 NC_017265.1 Protein Homology CDS 221325 222227 . + 0 ID=cds215;Parent=gene221;Dbxref=Genbank:WP_002208967.1;Name=WP_002208967.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=cation-efflux pump FieF;protein_id=WP_002208967.1;transl_table=11 NC_017265.1 RefSeq gene 222445 223428 . + . ID=gene222;Name=YPC_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01120;old_locus_tag=YPC_0240 NC_017265.1 Protein Homology CDS 222445 223428 . + 0 ID=cds216;Parent=gene222;Dbxref=Genbank:WP_002208966.1;Name=WP_002208966.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_002208966.1;transl_table=11 NC_017265.1 RefSeq gene 223649 224638 . + . ID=gene223;Name=YPC_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01125;old_locus_tag=YPC_0241 NC_017265.1 Protein Homology CDS 223649 224638 . + 0 ID=cds217;Parent=gene223;Dbxref=Genbank:WP_002208965.1;Name=WP_002208965.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_002208965.1;transl_table=11 NC_017265.1 RefSeq gene 224888 225547 . - . ID=gene224;Name=YPC_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01130;old_locus_tag=YPC_0242 NC_017265.1 Protein Homology CDS 224888 225547 . - 0 ID=cds218;Parent=gene224;Dbxref=Genbank:WP_025473238.1;Name=WP_025473238.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_025473238.1;transl_table=11 NC_017265.1 RefSeq gene 225782 227209 . - . ID=gene225;Name=YPC_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01135;old_locus_tag=YPC_0243 NC_017265.1 Protein Homology CDS 225782 227209 . - 0 ID=cds219;Parent=gene225;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11 NC_017265.1 RefSeq gene 227275 227988 . - . ID=gene226;Name=YPC_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01140;old_locus_tag=YPC_0244 NC_017265.1 Protein Homology CDS 227275 227988 . - 0 ID=cds220;Parent=gene226;Dbxref=Genbank:WP_002208962.1;Name=WP_002208962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208962.1;transl_table=11 NC_017265.1 RefSeq gene 227985 228722 . - . ID=gene227;Name=YPC_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01145;old_locus_tag=YPC_0245 NC_017265.1 Protein Homology CDS 227985 228722 . - 0 ID=cds221;Parent=gene227;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11 NC_017265.1 RefSeq gene 228859 230094 . + . ID=gene228;Name=YPC_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01150;old_locus_tag=YPC_0246 NC_017265.1 Protein Homology CDS 228859 230094 . + 0 ID=cds222;Parent=gene228;Dbxref=Genbank:WP_002208960.1;Name=WP_002208960.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208960.1;transl_table=11 NC_017265.1 RefSeq gene 230326 231093 . - . ID=gene229;Name=YPC_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01155;old_locus_tag=YPC_0247 NC_017265.1 Protein Homology CDS 230326 231093 . - 0 ID=cds223;Parent=gene229;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NC_017265.1 RefSeq gene 231222 231857 . - . ID=gene230;Name=YPC_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01160;old_locus_tag=YPC_0248 NC_017265.1 Protein Homology CDS 231222 231857 . - 0 ID=cds224;Parent=gene230;Dbxref=Genbank:WP_002223910.1;Name=WP_002223910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223910.1;transl_table=11 NC_017265.1 RefSeq gene 232005 232439 . + . ID=gene231;Name=YPC_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01165;old_locus_tag=YPC_0249 NC_017265.1 Protein Homology CDS 232005 232439 . + 0 ID=cds225;Parent=gene231;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11 NC_017265.1 RefSeq gene 232780 233526 . - . ID=gene232;Name=YPC_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01170;old_locus_tag=YPC_0250 NC_017265.1 Protein Homology CDS 232780 233526 . - 0 ID=cds226;Parent=gene232;Dbxref=Genbank:WP_002208956.1;Name=WP_002208956.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_002208956.1;transl_table=11 NC_017265.1 RefSeq gene 233681 234691 . - . ID=gene233;Name=YPC_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01175;old_locus_tag=YPC_0251 NC_017265.1 Protein Homology CDS 233681 234691 . - 0 ID=cds227;Parent=gene233;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NC_017265.1 RefSeq gene 234928 236451 . - . ID=gene234;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YPC_RS01180;old_locus_tag=YPC_0252 NC_017265.1 Protein Homology CDS 234928 236451 . - 0 ID=cds228;Parent=gene234;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11 NC_017265.1 RefSeq gene 236628 237477 . - . ID=gene235;Name=YPC_RS01185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS01185;pseudo=true NC_017265.1 Protein Homology CDS 236628 237477 . - 0 ID=cds229;Parent=gene235;Note=involved in the transport of glycerol into the cell;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycerol uptake facilitator GlpF;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 237487 237726 . - . ID=gene236;Name=YPC_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01190;old_locus_tag=YPC_0255 NC_017265.1 Protein Homology CDS 237487 237726 . - 0 ID=cds230;Parent=gene236;Dbxref=Genbank:WP_002215868.1;Name=WP_002215868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215868.1;transl_table=11 NC_017265.1 RefSeq gene 238105 238344 . + . ID=gene237;Name=YPC_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01195;old_locus_tag=YPC_0256 NC_017265.1 Protein Homology CDS 238105 238344 . + 0 ID=cds231;Parent=gene237;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11 NC_017265.1 RefSeq repeat_region 238438 239156 . + . ID=id17;gbkey=repeat_region NC_017265.1 RefSeq gene 238552 239010 . - . ID=gene238;Name=YPC_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01200;old_locus_tag=YPC_0257 NC_017265.1 Protein Homology CDS 238552 239010 . - 0 ID=cds232;Parent=gene238;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 239395 241509 . - . ID=gene239;Name=YPC_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01205;old_locus_tag=YPC_0260 NC_017265.1 Protein Homology CDS 239395 241509 . - 0 ID=cds233;Parent=gene239;Dbxref=Genbank:WP_002223915.1;Name=WP_002223915.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002223915.1;transl_table=11 NC_017265.1 RefSeq gene 241502 242794 . - . ID=gene240;Name=YPC_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01210;old_locus_tag=YPC_0261 NC_017265.1 Protein Homology CDS 241502 242794 . - 0 ID=cds234;Parent=gene240;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11 NC_017265.1 RefSeq gene 243007 243246 . + . ID=gene241;Name=YPC_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01215;old_locus_tag=YPC_0262 NC_017265.1 Protein Homology CDS 243007 243246 . + 0 ID=cds235;Parent=gene241;Dbxref=Genbank:WP_015683518.1;Name=WP_015683518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683518.1;transl_table=11 NC_017265.1 RefSeq gene 243421 243570 . + . ID=gene242;Name=YPC_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01220;old_locus_tag=YPC_0263 NC_017265.1 Protein Homology CDS 243421 243570 . + 0 ID=cds236;Parent=gene242;Dbxref=Genbank:WP_002208947.1;Name=WP_002208947.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208947.1;transl_table=11 NC_017265.1 RefSeq gene 243876 244460 . + . ID=gene243;Name=YPC_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01225;old_locus_tag=YPC_0266 NC_017265.1 Protein Homology CDS 243876 244460 . + 0 ID=cds237;Parent=gene243;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11 NC_017265.1 RefSeq gene 244577 245062 . - . ID=gene244;Name=YPC_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01230;old_locus_tag=YPC_0267 NC_017265.1 Protein Homology CDS 244577 245062 . - 0 ID=cds238;Parent=gene244;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=regulator of ribonuclease activity A;protein_id=WP_002208945.1;transl_table=11 NC_017265.1 RefSeq gene 245204 246121 . - . ID=gene245;Name=YPC_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01235;old_locus_tag=YPC_0268 NC_017265.1 Protein Homology CDS 245204 246121 . - 0 ID=cds239;Parent=gene245;Dbxref=Genbank:WP_002208944.1;Name=WP_002208944.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_002208944.1;transl_table=11 NC_017265.1 RefSeq gene 246357 247688 . - . ID=gene246;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YPC_RS01240;old_locus_tag=YPC_0269 NC_017265.1 Protein Homology CDS 246357 247688 . - 0 ID=cds240;Parent=gene246;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NC_017265.1 RefSeq gene 247759 248283 . - . ID=gene247;Name=YPC_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01245;old_locus_tag=YPC_0270 NC_017265.1 Protein Homology CDS 247759 248283 . - 0 ID=cds241;Parent=gene247;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NC_017265.1 RefSeq gene 248383 249228 . - . ID=gene248;Name=YPC_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01250;old_locus_tag=YPC_0271 NC_017265.1 Protein Homology CDS 248383 249228 . - 0 ID=cds242;Parent=gene248;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NC_017265.1 RefSeq gene 249294 250322 . - . ID=gene249;Name=YPC_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01255;old_locus_tag=YPC_0272 NC_017265.1 Protein Homology CDS 249294 250322 . - 0 ID=cds243;Parent=gene249;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11 NC_017265.1 RefSeq gene 250445 250588 . - . ID=gene250;Name=YPC_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01260 NC_017265.1 Protein Homology CDS 250445 250588 . - 0 ID=cds244;Parent=gene250;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11 NC_017265.1 RefSeq gene 250675 252873 . - . ID=gene251;Name=YPC_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01265;old_locus_tag=YPC_0273 NC_017265.1 Protein Homology CDS 250675 252873 . - 0 ID=cds245;Parent=gene251;Dbxref=Genbank:WP_002208938.1;Name=WP_002208938.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002208938.1;transl_table=11 NC_017265.1 RefSeq gene 253116 253331 . + . ID=gene252;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YPC_RS01270;old_locus_tag=YPC_0275 NC_017265.1 Protein Homology CDS 253116 253331 . + 0 ID=cds246;Parent=gene252;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NC_017265.1 RefSeq gene 253874 254329 . - . ID=gene253;Name=YPC_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01275;old_locus_tag=YPC_0276 NC_017265.1 Protein Homology CDS 253874 254329 . - 0 ID=cds247;Parent=gene253;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11 NC_017265.1 RefSeq gene 254380 254541 . + . ID=gene254;Name=YPC_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01280;old_locus_tag=YPC_0277 NC_017265.1 Protein Homology CDS 254380 254541 . + 0 ID=cds248;Parent=gene254;Dbxref=Genbank:WP_002216739.1;Name=WP_002216739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216739.1;transl_table=11 NC_017265.1 RefSeq gene 254678 254995 . - . ID=gene255;Name=YPC_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01285;old_locus_tag=YPC_0279 NC_017265.1 Protein Homology CDS 254678 254995 . - 0 ID=cds249;Parent=gene255;Dbxref=Genbank:WP_002208935.1;Name=WP_002208935.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_002208935.1;transl_table=11 NC_017265.1 RefSeq gene 255373 256532 . + . ID=gene256;Name=YPC_RS01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS01290;pseudo=true NC_017265.1 Protein Homology CDS 255373 256532 . + 0 ID=cds250;Parent=gene256;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cystathionine gamma-synthase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 256535 258970 . + . ID=gene257;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YPC_RS01295;old_locus_tag=YPC_0282 NC_017265.1 Protein Homology CDS 256535 258970 . + 0 ID=cds251;Parent=gene257;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NC_017265.1 RefSeq gene 259203 260087 . + . ID=gene258;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YPC_RS01300;old_locus_tag=YPC_0283 NC_017265.1 Protein Homology CDS 259203 260087 . + 0 ID=cds252;Parent=gene258;Dbxref=Genbank:WP_002208933.1;Name=WP_002208933.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NC_017265.1 RefSeq repeat_region 260120 261917 . + . ID=id18;gbkey=repeat_region NC_017265.1 RefSeq gene 260265 261050 . - . ID=gene259;Name=YPC_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01305;old_locus_tag=YPC_0284 NC_017265.1 Protein Homology CDS 260265 261050 . - 0 ID=cds253;Parent=gene259;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_017265.1 RefSeq gene 261104 261619 . - . ID=gene260;Name=YPC_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01310 NC_017265.1 Protein Homology CDS 261104 261619 . - 0 ID=cds254;Parent=gene260;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_017265.1 RefSeq gene 262361 264997 . - . ID=gene261;Name=YPC_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01315;old_locus_tag=YPC_0287 NC_017265.1 Protein Homology CDS 262361 264997 . - 0 ID=cds255;Parent=gene261;Dbxref=Genbank:WP_002209491.1;Name=WP_002209491.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_002209491.1;transl_table=11 NC_017265.1 RefSeq gene 265371 266534 . - . ID=gene262;Name=YPC_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01320;old_locus_tag=YPC_0288 NC_017265.1 Protein Homology CDS 265371 266534 . - 0 ID=cds256;Parent=gene262;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NC_017265.1 RefSeq gene 266785 267789 . + . ID=gene263;Name=YPC_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01325;old_locus_tag=YPC_0289 NC_017265.1 Protein Homology CDS 266785 267789 . + 0 ID=cds257;Parent=gene263;Dbxref=Genbank:WP_002209489.1;Name=WP_002209489.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002209489.1;transl_table=11 NC_017265.1 RefSeq gene 267958 268731 . + . ID=gene264;Name=YPC_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01330;old_locus_tag=YPC_0290 NC_017265.1 Protein Homology CDS 267958 268731 . + 0 ID=cds258;Parent=gene264;Dbxref=Genbank:WP_002209488.1;Name=WP_002209488.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_002209488.1;transl_table=11 NC_017265.1 RefSeq gene 268898 270271 . + . ID=gene265;Name=YPC_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01335;old_locus_tag=YPC_0291 NC_017265.1 Protein Homology CDS 268898 270271 . + 0 ID=cds259;Parent=gene265;Dbxref=Genbank:WP_002209487.1;Name=WP_002209487.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11 NC_017265.1 RefSeq gene 270434 270559 . - . ID=gene266;Name=YPC_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01340 NC_017265.1 Protein Homology CDS 270434 270559 . - 0 ID=cds260;Parent=gene266;Dbxref=Genbank:WP_002209486.1;Name=WP_002209486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209486.1;transl_table=11 NC_017265.1 RefSeq gene 270870 273361 . + . ID=gene267;Name=YPC_RS01345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS01345;pseudo=true NC_017265.1 Protein Homology CDS 270870 273361 . + 0 ID=cds261;Parent=gene267;exception=annotated by transcript or proteomic data;gbkey=CDS;product=TonB-dependent receptor;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 273583 274200 . + . ID=gene268;Name=YPC_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01350;old_locus_tag=YPC_0294 NC_017265.1 Protein Homology CDS 273583 274200 . + 0 ID=cds262;Parent=gene268;Dbxref=Genbank:WP_002209484.1;Name=WP_002209484.1;gbkey=CDS;product=hemophore HasA;protein_id=WP_002209484.1;transl_table=11 NC_017265.1 RefSeq gene 274366 276174 . + . ID=gene269;Name=YPC_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01355;old_locus_tag=YPC_0295 NC_017265.1 Protein Homology CDS 274366 276174 . + 0 ID=cds263;Parent=gene269;Dbxref=Genbank:WP_002209483.1;Name=WP_002209483.1;gbkey=CDS;product=peptidase;protein_id=WP_002209483.1;transl_table=11 NC_017265.1 RefSeq gene 276250 277578 . + . ID=gene270;Name=YPC_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01360;old_locus_tag=YPC_0296 NC_017265.1 Protein Homology CDS 276250 277578 . + 0 ID=cds264;Parent=gene270;Dbxref=Genbank:WP_002209482.1;Name=WP_002209482.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002209482.1;transl_table=11 NC_017265.1 RefSeq gene 277643 278446 . + . ID=gene271;Name=YPC_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01365;old_locus_tag=YPC_0297 NC_017265.1 Protein Homology CDS 277643 278446 . + 0 ID=cds265;Parent=gene271;Dbxref=Genbank:WP_002209481.1;Name=WP_002209481.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002209481.1;transl_table=11 NC_017265.1 RefSeq gene 278562 280025 . - . ID=gene272;Name=YPC_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01370;old_locus_tag=YPC_0298 NC_017265.1 Protein Homology CDS 278562 280025 . - 0 ID=cds266;Parent=gene272;Dbxref=Genbank:WP_002209480.1;Name=WP_002209480.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209480.1;transl_table=11 NC_017265.1 RefSeq gene 280120 280851 . - . ID=gene273;Name=YPC_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01375;old_locus_tag=YPC_0299 NC_017265.1 Protein Homology CDS 280120 280851 . - 0 ID=cds267;Parent=gene273;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11 NC_017265.1 RefSeq gene 280998 281915 . + . ID=gene274;Name=YPC_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01380;old_locus_tag=YPC_0300 NC_017265.1 Protein Homology CDS 280998 281915 . + 0 ID=cds268;Parent=gene274;Dbxref=Genbank:WP_002209478.1;Name=WP_002209478.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209478.1;transl_table=11 NC_017265.1 RefSeq gene 281898 283298 . - . ID=gene275;Name=YPC_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01385;old_locus_tag=YPC_0301 NC_017265.1 Protein Homology CDS 281898 283298 . - 0 ID=cds269;Parent=gene275;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NC_017265.1 RefSeq gene 283516 284151 . + . ID=gene276;Name=YPC_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01390;old_locus_tag=YPC_0302 NC_017265.1 Protein Homology CDS 283516 284151 . + 0 ID=cds270;Parent=gene276;Dbxref=Genbank:WP_002209476.1;Name=WP_002209476.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209476.1;transl_table=11 NC_017265.1 RefSeq gene 284164 284571 . + . ID=gene277;Name=YPC_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01395;old_locus_tag=YPC_0303 NC_017265.1 Protein Homology CDS 284164 284571 . + 0 ID=cds271;Parent=gene277;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11 NC_017265.1 RefSeq gene 284705 285808 . - . ID=gene278;Name=YPC_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01400;old_locus_tag=YPC_0304 NC_017265.1 Protein Homology CDS 284705 285808 . - 0 ID=cds272;Parent=gene278;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11 NC_017265.1 RefSeq gene 285807 286052 . + . ID=gene279;Name=YPC_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01405 NC_017265.1 Protein Homology CDS 285807 286052 . + 0 ID=cds273;Parent=gene279;Dbxref=Genbank:WP_002215343.1;Name=WP_002215343.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215343.1;transl_table=11 NC_017265.1 RefSeq gene 286288 288165 . + . ID=gene280;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YPC_RS01410;old_locus_tag=YPC_0305 NC_017265.1 Protein Homology CDS 286288 288165 . + 0 ID=cds274;Parent=gene280;Dbxref=Genbank:WP_002228170.1;Name=WP_002228170.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_002228170.1;transl_table=11 NC_017265.1 RefSeq gene 288110 288973 . + . ID=gene281;Name=YPC_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01415;old_locus_tag=YPC_0306 NC_017265.1 Protein Homology CDS 288110 288973 . + 0 ID=cds275;Parent=gene281;Dbxref=Genbank:WP_002228171.1;Name=WP_002228171.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_002228171.1;transl_table=11 NC_017265.1 RefSeq repeat_region 288995 294771 . + . ID=id19;gbkey=repeat_region NC_017265.1 RefSeq gene 289427 290975 . + . ID=gene282;Name=YPC_RS01425;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS01425;old_locus_tag=YPC_0308 NC_017265.1 RefSeq rRNA 289427 290975 . + . ID=rna6;Parent=gene282;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq exon 289427 290975 . + . ID=id20;Parent=rna6;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq gene 291109 291184 . + . ID=gene283;Name=YPC_RS01430;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS01430;old_locus_tag=YPC_0309 NC_017265.1 tRNAscan-SE tRNA 291109 291184 . + . ID=rna7;Parent=gene283;anticodon=(pos:291143..291145);gbkey=tRNA;product=tRNA-Glu NC_017265.1 tRNAscan-SE exon 291109 291184 . + . ID=id21;Parent=rna7;anticodon=(pos:291143..291145);gbkey=tRNA;product=tRNA-Glu NC_017265.1 RefSeq gene 291428 294361 . + . ID=gene284;Name=YPC_RS01435;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS01435;old_locus_tag=YPC_0310 NC_017265.1 RefSeq rRNA 291428 294361 . + . ID=rna8;Parent=gene284;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq exon 291428 294361 . + . ID=id22;Parent=rna8;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq gene 294453 294568 . + . ID=gene285;Name=YPC_RS01440;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS01440;old_locus_tag=YPC_0311 NC_017265.1 cmsearch rRNA 294453 294568 . + . ID=rna9;Parent=gene285;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 294453 294568 . + . ID=id23;Parent=rna9;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 294694 294770 . + . ID=gene286;Name=YPC_RS01445;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS01445;old_locus_tag=YPC_0313 NC_017265.1 tRNAscan-SE tRNA 294694 294770 . + . ID=rna10;Parent=gene286;anticodon=(pos:294728..294730);gbkey=tRNA;product=tRNA-Asp NC_017265.1 tRNAscan-SE exon 294694 294770 . + . ID=id24;Parent=rna10;anticodon=(pos:294728..294730);gbkey=tRNA;product=tRNA-Asp NC_017265.1 RefSeq gene 294779 294854 . + . ID=gene287;Name=YPC_RS01450;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS01450;old_locus_tag=YPC_0314 NC_017265.1 tRNAscan-SE tRNA 294779 294854 . + . ID=rna11;Parent=gene287;anticodon=(pos:294812..294814);gbkey=tRNA;product=tRNA-Trp NC_017265.1 tRNAscan-SE exon 294779 294854 . + . ID=id25;Parent=rna11;anticodon=(pos:294812..294814);gbkey=tRNA;product=tRNA-Trp NC_017265.1 RefSeq gene 294981 295191 . - . ID=gene288;Name=YPC_RS22045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS22045;pseudo=true NC_017265.1 Protein Homology CDS 294981 295191 . - 0 ID=cds276;Parent=gene288;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 295832 296788 . + . ID=gene289;Name=YPC_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01455;old_locus_tag=YPC_0315 NC_017265.1 Protein Homology CDS 295832 296788 . + 0 ID=cds277;Parent=gene289;Dbxref=Genbank:WP_015683521.1;Name=WP_015683521.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_015683521.1;transl_table=11 NC_017265.1 RefSeq gene 296874 298364 . + . ID=gene290;Name=YPC_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01460;old_locus_tag=YPC_0316 NC_017265.1 Protein Homology CDS 296874 298364 . + 0 ID=cds278;Parent=gene290;Dbxref=Genbank:WP_002212023.1;Name=WP_002212023.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002212023.1;transl_table=11 NC_017265.1 RefSeq gene 298397 299395 . + . ID=gene291;Name=YPC_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01465 NC_017265.1 Protein Homology CDS 298397 299395 . + 0 ID=cds279;Parent=gene291;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11 NC_017265.1 RefSeq gene 299395 300387 . + . ID=gene292;Name=YPC_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01470 NC_017265.1 Protein Homology CDS 299395 300387 . + 0 ID=cds280;Parent=gene292;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11 NC_017265.1 RefSeq gene 300374 301255 . - . ID=gene293;Name=YPC_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01475;old_locus_tag=YPC_0319 NC_017265.1 Protein Homology CDS 300374 301255 . - 0 ID=cds281;Parent=gene293;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11 NC_017265.1 RefSeq gene 301374 301712 . + . ID=gene294;Name=YPC_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01480;old_locus_tag=YPC_0320 NC_017265.1 Protein Homology CDS 301374 301712 . + 0 ID=cds282;Parent=gene294;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11 NC_017265.1 RefSeq gene 301969 303492 . - . ID=gene295;Name=YPC_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01485;old_locus_tag=YPC_0321 NC_017265.1 Protein Homology CDS 301969 303492 . - 0 ID=cds283;Parent=gene295;Dbxref=Genbank:WP_002212018.1;Name=WP_002212018.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATPase;protein_id=WP_002212018.1;transl_table=11 NC_017265.1 RefSeq gene 304115 305761 . + . ID=gene296;Name=YPC_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01490;old_locus_tag=YPC_0322 NC_017265.1 Protein Homology CDS 304115 305761 . + 0 ID=cds284;Parent=gene296;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11 NC_017265.1 RefSeq gene 305758 306015 . + . ID=gene297;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YPC_RS01495;old_locus_tag=YPC_0323 NC_017265.1 Protein Homology CDS 305758 306015 . + 0 ID=cds285;Parent=gene297;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11 NC_017265.1 RefSeq gene 306038 306964 . + . ID=gene298;Name=YPC_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01500;old_locus_tag=YPC_0324 NC_017265.1 Protein Homology CDS 306038 306964 . + 0 ID=cds286;Parent=gene298;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11 NC_017265.1 RefSeq gene 307275 309125 . + . ID=gene299;Name=YPC_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01505;old_locus_tag=YPC_0325 NC_017265.1 Protein Homology CDS 307275 309125 . + 0 ID=cds287;Parent=gene299;Dbxref=Genbank:WP_002212014.1;Name=WP_002212014.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11 NC_017265.1 RefSeq gene 309131 310675 . + . ID=gene300;Name=YPC_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01510;old_locus_tag=YPC_0326 NC_017265.1 Protein Homology CDS 309131 310675 . + 0 ID=cds288;Parent=gene300;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11 NC_017265.1 RefSeq gene 310806 311270 . - . ID=gene301;Name=YPC_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01515;old_locus_tag=YPC_0327 NC_017265.1 Protein Homology CDS 310806 311270 . - 0 ID=cds289;Parent=gene301;Dbxref=Genbank:WP_002216998.1;Name=WP_002216998.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216998.1;transl_table=11 NC_017265.1 RefSeq repeat_region 311191 312400 . + . ID=id26;gbkey=repeat_region NC_017265.1 RefSeq gene 311350 311811 . - . ID=gene302;Name=YPC_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01520;old_locus_tag=YPC_0328 NC_017265.1 Protein Homology CDS 311350 311811 . - 0 ID=cds290;Parent=gene302;Dbxref=Genbank:WP_002217000.1;Name=WP_002217000.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217000.1;transl_table=11 NC_017265.1 RefSeq gene 311891 312352 . - . ID=gene303;Name=YPC_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01525;old_locus_tag=YPC_0329 NC_017265.1 Protein Homology CDS 311891 312352 . - 0 ID=cds291;Parent=gene303;Dbxref=Genbank:WP_002212010.1;Name=WP_002212010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212010.1;transl_table=11 NC_017265.1 RefSeq gene 312336 313214 . - . ID=gene304;Name=YPC_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01530;old_locus_tag=YPC_0330 NC_017265.1 Protein Homology CDS 312336 313214 . - 0 ID=cds292;Parent=gene304;Dbxref=Genbank:WP_002228241.1;Name=WP_002228241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228241.1;transl_table=11 NC_017265.1 RefSeq gene 313862 314071 . + . ID=gene305;Name=YPC_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01535;old_locus_tag=YPC_0331 NC_017265.1 Protein Homology CDS 313862 314071 . + 0 ID=cds293;Parent=gene305;Dbxref=Genbank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NC_017265.1 RefSeq gene 314126 315007 . - . ID=gene306;Name=YPC_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01540;old_locus_tag=YPC_0332 NC_017265.1 Protein Homology CDS 314126 315007 . - 0 ID=cds294;Parent=gene306;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11 NC_017265.1 RefSeq gene 315293 316771 . + . ID=gene307;Name=YPC_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01545;old_locus_tag=YPC_0333 NC_017265.1 Protein Homology CDS 315293 316771 . + 0 ID=cds295;Parent=gene307;Dbxref=Genbank:WP_002212007.1;Name=WP_002212007.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_002212007.1;transl_table=11 NC_017265.1 RefSeq gene 316952 317152 . + . ID=gene308;Name=YPC_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01550;old_locus_tag=YPC_0334 NC_017265.1 Protein Homology CDS 316952 317152 . + 0 ID=cds296;Parent=gene308;Dbxref=Genbank:WP_002212006.1;Name=WP_002212006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212006.1;transl_table=11 NC_017265.1 RefSeq gene 317360 318790 . + . ID=gene309;Name=YPC_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01555;old_locus_tag=YPC_0335 NC_017265.1 Protein Homology CDS 317360 318790 . + 0 ID=cds297;Parent=gene309;Dbxref=Genbank:WP_042468758.1;Name=WP_042468758.1;gbkey=CDS;product=colicin;protein_id=WP_042468758.1;transl_table=11 NC_017265.1 RefSeq gene 318790 319053 . + . ID=gene310;Name=YPC_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01560;old_locus_tag=YPC_0336 NC_017265.1 Protein Homology CDS 318790 319053 . + 0 ID=cds298;Parent=gene310;Dbxref=Genbank:WP_002212004.1;Name=WP_002212004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212004.1;transl_table=11 NC_017265.1 RefSeq gene 319306 319557 . + . ID=gene311;Name=YPC_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01565;old_locus_tag=YPC_0337 NC_017265.1 Protein Homology CDS 319306 319557 . + 0 ID=cds299;Parent=gene311;Dbxref=Genbank:WP_002215823.1;Name=WP_002215823.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_002215823.1;transl_table=11 NC_017265.1 RefSeq gene 319559 319816 . + . ID=gene312;Name=YPC_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01570;old_locus_tag=YPC_0338 NC_017265.1 Protein Homology CDS 319559 319816 . + 0 ID=cds300;Parent=gene312;Dbxref=Genbank:WP_002212003.1;Name=WP_002212003.1;gbkey=CDS;product=colicin transporter;protein_id=WP_002212003.1;transl_table=11 NC_017265.1 RefSeq gene 320269 320427 . - . ID=gene313;Name=YPC_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01575;old_locus_tag=YPC_0339 NC_017265.1 Protein Homology CDS 320269 320427 . - 0 ID=cds301;Parent=gene313;Dbxref=Genbank:WP_002212002.1;Name=WP_002212002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212002.1;transl_table=11 NC_017265.1 RefSeq gene 320451 321269 . - . ID=gene314;Name=YPC_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01580;old_locus_tag=YPC_0340 NC_017265.1 Protein Homology CDS 320451 321269 . - 0 ID=cds302;Parent=gene314;Dbxref=Genbank:WP_002215825.1;Name=WP_002215825.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002215825.1;transl_table=11 NC_017265.1 RefSeq gene 321235 322512 . - . ID=gene315;Name=YPC_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01585;old_locus_tag=YPC_0341 NC_017265.1 Protein Homology CDS 321235 322512 . - 0 ID=cds303;Parent=gene315;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11 NC_017265.1 RefSeq gene 322619 325246 . - . ID=gene316;Name=YPC_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01590;old_locus_tag=YPC_0342 NC_017265.1 Protein Homology CDS 322619 325246 . - 0 ID=cds304;Parent=gene316;Dbxref=Genbank:WP_002211999.1;Name=WP_002211999.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211999.1;transl_table=11 NC_017265.1 RefSeq gene 325274 326005 . - . ID=gene317;Name=YPC_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01595;old_locus_tag=YPC_0343 NC_017265.1 Protein Homology CDS 325274 326005 . - 0 ID=cds305;Parent=gene317;Dbxref=Genbank:WP_002211998.1;Name=WP_002211998.1;gbkey=CDS;product=gram-negative pili assembly chaperone;protein_id=WP_002211998.1;transl_table=11 NC_017265.1 RefSeq gene 326069 326599 . - . ID=gene318;Name=YPC_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01600;old_locus_tag=YPC_0344 NC_017265.1 Protein Homology CDS 326069 326599 . - 0 ID=cds306;Parent=gene318;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NC_017265.1 RefSeq gene 326910 327086 . + . ID=gene319;Name=YPC_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01605 NC_017265.1 Protein Homology CDS 326910 327086 . + 0 ID=cds307;Parent=gene319;Dbxref=Genbank:WP_002231894.1;Name=WP_002231894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231894.1;transl_table=11 NC_017265.1 RefSeq repeat_region 327372 328689 . + . ID=id27;gbkey=repeat_region NC_017265.1 RefSeq gene 327409 328617 . - . ID=gene320;Name=YPC_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01610;old_locus_tag=YPC_0345 NC_017265.1 Protein Homology CDS 327409 328617 . - 0 ID=cds308;Parent=gene320;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 328714 329505 . - . ID=gene321;Name=YPC_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01615;old_locus_tag=YPC_0346 NC_017265.1 Protein Homology CDS 328714 329505 . - 0 ID=cds309;Parent=gene321;Dbxref=Genbank:WP_002211996.1;Name=WP_002211996.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_002211996.1;transl_table=11 NC_017265.1 RefSeq gene 329744 330025 . - . ID=gene322;Name=YPC_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01620;old_locus_tag=YPC_0347 NC_017265.1 Protein Homology CDS 329744 330025 . - 0 ID=cds310;Parent=gene322;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11 NC_017265.1 RefSeq gene 330045 330230 . - . ID=gene323;Name=YPC_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01625;old_locus_tag=YPC_0348 NC_017265.1 Protein Homology CDS 330045 330230 . - 0 ID=cds311;Parent=gene323;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NC_017265.1 RefSeq gene 330229 332250 . + . ID=gene324;Name=YPC_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01630;old_locus_tag=YPC_0349 NC_017265.1 Protein Homology CDS 330229 332250 . + 0 ID=cds312;Parent=gene324;Dbxref=Genbank:WP_002211993.1;Name=WP_002211993.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_002211993.1;transl_table=11 NC_017265.1 RefSeq gene 332418 333428 . - . ID=gene325;Name=YPC_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01635 NC_017265.1 Protein Homology CDS 332418 333428 . - 0 ID=cds313;Parent=gene325;Dbxref=Genbank:WP_002355446.1;Name=WP_002355446.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_002355446.1;transl_table=11 NC_017265.1 RefSeq gene 333407 333913 . - . ID=gene326;Name=YPC_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01640 NC_017265.1 Protein Homology CDS 333407 333913 . - 0 ID=cds314;Parent=gene326;Dbxref=Genbank:WP_002228244.1;Name=WP_002228244.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphatepyrophosphatase;protein_id=WP_002228244.1;transl_table=11 NC_017265.1 RefSeq gene 333917 335203 . - . ID=gene327;Name=YPC_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01645;old_locus_tag=YPC_0353 NC_017265.1 Protein Homology CDS 333917 335203 . - 0 ID=cds315;Parent=gene327;Dbxref=Genbank:WP_002228177.1;Name=WP_002228177.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11 NC_017265.1 RefSeq gene 335322 335648 . + . ID=gene328;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YPC_RS01650;old_locus_tag=YPC_0354 NC_017265.1 Protein Homology CDS 335322 335648 . + 0 ID=cds316;Parent=gene328;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11 NC_017265.1 RefSeq gene 336128 337387 . + . ID=gene329;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YPC_RS01655;old_locus_tag=YPC_0355 NC_017265.1 Protein Homology CDS 336128 337387 . + 0 ID=cds317;Parent=gene329;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NC_017265.1 RefSeq gene 337937 339019 . + . ID=gene330;Name=YPC_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01660;old_locus_tag=YPC_0356 NC_017265.1 Protein Homology CDS 337937 339019 . + 0 ID=cds318;Parent=gene330;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11 NC_017265.1 RefSeq gene 339040 340116 . + . ID=gene331;Name=YPC_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01665;old_locus_tag=YPC_0357 NC_017265.1 Protein Homology CDS 339040 340116 . + 0 ID=cds319;Parent=gene331;Dbxref=Genbank:WP_002226022.1;Name=WP_002226022.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002226022.1;transl_table=11 NC_017265.1 RefSeq gene 340397 341527 . + . ID=gene332;Name=YPC_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01670;old_locus_tag=YPC_0358 NC_017265.1 Protein Homology CDS 340397 341527 . + 0 ID=cds320;Parent=gene332;Dbxref=Genbank:WP_002211986.1;Name=WP_002211986.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_002211986.1;transl_table=11 NC_017265.1 RefSeq gene 341524 342786 . + . ID=gene333;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YPC_RS01675;old_locus_tag=YPC_0359 NC_017265.1 Protein Homology CDS 341524 342786 . + 0 ID=cds321;Parent=gene333;Dbxref=Genbank:WP_002211985.1;Name=WP_002211985.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NC_017265.1 RefSeq gene 342783 343850 . + . ID=gene334;Name=YPC_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01680;old_locus_tag=YPC_0360 NC_017265.1 Protein Homology CDS 342783 343850 . + 0 ID=cds322;Parent=gene334;Dbxref=Genbank:WP_002211984.1;Name=WP_002211984.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_002211984.1;transl_table=11 NC_017265.1 RefSeq gene 344145 345026 . + . ID=gene335;Name=YPC_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01685;old_locus_tag=YPC_0361 NC_017265.1 Protein Homology CDS 344145 345026 . + 0 ID=cds323;Parent=gene335;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11 NC_017265.1 RefSeq gene 345004 345741 . + . ID=gene336;Name=YPC_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01690;old_locus_tag=YPC_0362 NC_017265.1 Protein Homology CDS 345004 345741 . + 0 ID=cds324;Parent=gene336;Dbxref=Genbank:WP_002211982.1;Name=WP_002211982.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_002211982.1;transl_table=11 NC_017265.1 RefSeq gene 345743 346873 . + . ID=gene337;Name=YPC_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01695;old_locus_tag=YPC_0363 NC_017265.1 Protein Homology CDS 345743 346873 . + 0 ID=cds325;Parent=gene337;Dbxref=Genbank:WP_002211981.1;Name=WP_002211981.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_002211981.1;transl_table=11 NC_017265.1 RefSeq gene 346875 348131 . + . ID=gene338;Name=YPC_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01700;old_locus_tag=YPC_0364 NC_017265.1 Protein Homology CDS 346875 348131 . + 0 ID=cds326;Parent=gene338;Dbxref=Genbank:WP_002211980.1;Name=WP_002211980.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=translocase;protein_id=WP_002211980.1;transl_table=11 NC_017265.1 RefSeq gene 348154 349239 . + . ID=gene339;Name=YPC_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01705;old_locus_tag=YPC_0365 NC_017265.1 Protein Homology CDS 348154 349239 . + 0 ID=cds327;Parent=gene339;Dbxref=Genbank:WP_002211979.1;Name=WP_002211979.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_002211979.1;transl_table=11 NC_017265.1 RefSeq gene 349236 350600 . + . ID=gene340;Name=YPC_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01710;old_locus_tag=YPC_0366 NC_017265.1 Protein Homology CDS 349236 350600 . + 0 ID=cds328;Parent=gene340;Dbxref=Genbank:WP_002211978.1;Name=WP_002211978.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=polymerase;protein_id=WP_002211978.1;transl_table=11 NC_017265.1 RefSeq gene 350609 351349 . + . ID=gene341;Name=YPC_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01715;old_locus_tag=YPC_0367 NC_017265.1 Protein Homology CDS 350609 351349 . + 0 ID=cds329;Parent=gene341;Dbxref=Genbank:WP_002211977.1;Name=WP_002211977.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_002211977.1;transl_table=11 NC_017265.1 RefSeq repeat_region 351623 351748 . + . ID=id28;gbkey=repeat_region NC_017265.1 RefSeq gene 351873 353264 . + . ID=gene342;Name=YPC_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01720;old_locus_tag=YPC_0368 NC_017265.1 Protein Homology CDS 351873 353264 . + 0 ID=cds330;Parent=gene342;Dbxref=Genbank:WP_002220976.1;Name=WP_002220976.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220976.1;transl_table=11 NC_017265.1 RefSeq gene 353413 353489 . + . ID=gene343;Name=YPC_RS01725;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS01725;old_locus_tag=YPC_0369 NC_017265.1 tRNAscan-SE tRNA 353413 353489 . + . ID=rna12;Parent=gene343;anticodon=(pos:353447..353449);gbkey=tRNA;product=tRNA-Arg NC_017265.1 tRNAscan-SE exon 353413 353489 . + . ID=id29;Parent=rna12;anticodon=(pos:353447..353449);gbkey=tRNA;product=tRNA-Arg NC_017265.1 RefSeq gene 353573 353648 . + . ID=gene344;Name=YPC_RS01730;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS01730;old_locus_tag=YPC_0370 NC_017265.1 tRNAscan-SE tRNA 353573 353648 . + . ID=rna13;Parent=gene344;anticodon=(pos:353606..353608);gbkey=tRNA;product=tRNA-His NC_017265.1 tRNAscan-SE exon 353573 353648 . + . ID=id30;Parent=rna13;anticodon=(pos:353606..353608);gbkey=tRNA;product=tRNA-His NC_017265.1 RefSeq gene 353665 353751 . + . ID=gene345;Name=YPC_RS01735;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS01735;old_locus_tag=YPC_0371 NC_017265.1 tRNAscan-SE tRNA 353665 353751 . + . ID=rna14;Parent=gene345;anticodon=(pos:353699..353701);gbkey=tRNA;product=tRNA-Leu NC_017265.1 tRNAscan-SE exon 353665 353751 . + . ID=id31;Parent=rna14;anticodon=(pos:353699..353701);gbkey=tRNA;product=tRNA-Leu NC_017265.1 RefSeq gene 353827 353903 . + . ID=gene346;Name=YPC_RS01740;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS01740;old_locus_tag=YPC_0372 NC_017265.1 tRNAscan-SE tRNA 353827 353903 . + . ID=rna15;Parent=gene346;anticodon=(pos:353861..353863);gbkey=tRNA;product=tRNA-Pro NC_017265.1 tRNAscan-SE exon 353827 353903 . + . ID=id32;Parent=rna15;anticodon=(pos:353861..353863);gbkey=tRNA;product=tRNA-Pro NC_017265.1 RefSeq repeat_region 354619 355340 . + . ID=id33;gbkey=repeat_region NC_017265.1 RefSeq gene 354770 355228 . + . ID=gene347;Name=YPC_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01745;old_locus_tag=YPC_0375 NC_017265.1 Protein Homology CDS 354770 355228 . + 0 ID=cds331;Parent=gene347;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 355421 356641 . - . ID=gene348;Name=YPC_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01750;old_locus_tag=YPC_0376 NC_017265.1 Protein Homology CDS 355421 356641 . - 0 ID=cds332;Parent=gene348;Dbxref=Genbank:WP_002211462.1;Name=WP_002211462.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_002211462.1;transl_table=11 NC_017265.1 RefSeq gene 356644 357768 . - . ID=gene349;Name=YPC_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01755;old_locus_tag=YPC_0377 NC_017265.1 Protein Homology CDS 356644 357768 . - 0 ID=cds333;Parent=gene349;Dbxref=Genbank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211463.1;transl_table=11 NC_017265.1 RefSeq gene 357799 358548 . - . ID=gene350;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YPC_RS01760;old_locus_tag=YPC_0378 NC_017265.1 Protein Homology CDS 357799 358548 . - 0 ID=cds334;Parent=gene350;Dbxref=Genbank:WP_002211464.1;Name=WP_002211464.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211464.1;transl_table=11 NC_017265.1 RefSeq gene 358545 359486 . - . ID=gene351;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YPC_RS01765;old_locus_tag=YPC_0379 NC_017265.1 Protein Homology CDS 358545 359486 . - 0 ID=cds335;Parent=gene351;Dbxref=Genbank:WP_002211465.1;Name=WP_002211465.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_002211465.1;transl_table=11 NC_017265.1 RefSeq gene 359707 359907 . - . ID=gene352;Name=YPC_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01770;old_locus_tag=YPC_0381 NC_017265.1 Protein Homology CDS 359707 359907 . - 0 ID=cds336;Parent=gene352;Dbxref=Genbank:WP_002211467.1;Name=WP_002211467.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211467.1;transl_table=11 NC_017265.1 RefSeq gene 359980 362532 . + . ID=gene353;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=YPC_RS01775;old_locus_tag=YPC_0382 NC_017265.1 Protein Homology CDS 359980 362532 . + 0 ID=cds337;Parent=gene353;Dbxref=Genbank:WP_015683523.1;Name=WP_015683523.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_015683523.1;transl_table=11 NC_017265.1 RefSeq repeat_region 362569 362741 . + . ID=id34;gbkey=repeat_region NC_017265.1 RefSeq gene 362776 363096 . - . ID=gene354;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YPC_RS01780;old_locus_tag=YPC_0384 NC_017265.1 Protein Homology CDS 362776 363096 . - 0 ID=cds338;Parent=gene354;Dbxref=Genbank:WP_002211469.1;Name=WP_002211469.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_002211469.1;transl_table=11 NC_017265.1 RefSeq gene 363248 363436 . + . ID=gene355;Name=YPC_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01785;old_locus_tag=YPC_0385 NC_017265.1 Protein Homology CDS 363248 363436 . + 0 ID=cds339;Parent=gene355;Dbxref=Genbank:WP_002211470.1;Name=WP_002211470.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211470.1;transl_table=11 NC_017265.1 RefSeq gene 363620 364444 . + . ID=gene356;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YPC_RS01790;old_locus_tag=YPC_0386 NC_017265.1 Protein Homology CDS 363620 364444 . + 0 ID=cds340;Parent=gene356;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NC_017265.1 RefSeq gene 364509 365213 . + . ID=gene357;Name=YPC_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01795;old_locus_tag=YPC_0387 NC_017265.1 Protein Homology CDS 364509 365213 . + 0 ID=cds341;Parent=gene357;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11 NC_017265.1 RefSeq gene 365210 366121 . + . ID=gene358;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YPC_RS01800;old_locus_tag=YPC_0388 NC_017265.1 Protein Homology CDS 365210 366121 . + 0 ID=cds342;Parent=gene358;Dbxref=Genbank:WP_002211473.1;Name=WP_002211473.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NC_017265.1 RefSeq gene 366121 366837 . + . ID=gene359;Name=YPC_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01805;old_locus_tag=YPC_0389 NC_017265.1 Protein Homology CDS 366121 366837 . + 0 ID=cds343;Parent=gene359;Dbxref=Genbank:WP_002211474.1;Name=WP_002211474.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_002211474.1;transl_table=11 NC_017265.1 RefSeq gene 366939 369101 . + . ID=gene360;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=YPC_RS01810;old_locus_tag=YPC_0390 NC_017265.1 Protein Homology CDS 366939 369101 . + 0 ID=cds344;Parent=gene360;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11 NC_017265.1 RefSeq gene 369215 369901 . - . ID=gene361;Name=YPC_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01815;old_locus_tag=YPC_0391 NC_017265.1 Protein Homology CDS 369215 369901 . - 0 ID=cds345;Parent=gene361;Dbxref=Genbank:WP_002211476.1;Name=WP_002211476.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002211476.1;transl_table=11 NC_017265.1 RefSeq gene 370329 371546 . + . ID=gene362;Name=YPC_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01820;old_locus_tag=YPC_0392 NC_017265.1 Protein Homology CDS 370329 371546 . + 0 ID=cds346;Parent=gene362;Dbxref=Genbank:WP_002211477.1;Name=WP_002211477.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211477.1;transl_table=11 NC_017265.1 RefSeq gene 371572 372402 . + . ID=gene363;Name=YPC_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01825;old_locus_tag=YPC_0393 NC_017265.1 Protein Homology CDS 371572 372402 . + 0 ID=cds347;Parent=gene363;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11 NC_017265.1 RefSeq gene 373051 374001 . + . ID=gene364;Name=YPC_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01830;old_locus_tag=YPC_0395 NC_017265.1 Protein Homology CDS 373051 374001 . + 0 ID=cds348;Parent=gene364;Dbxref=Genbank:WP_002211480.1;Name=WP_002211480.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_002211480.1;transl_table=11 NC_017265.1 RefSeq gene 374099 374989 . - . ID=gene365;Name=YPC_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01835;old_locus_tag=YPC_0396 NC_017265.1 Protein Homology CDS 374099 374989 . - 0 ID=cds349;Parent=gene365;Dbxref=Genbank:WP_002211481.1;Name=WP_002211481.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_002211481.1;transl_table=11 NC_017265.1 RefSeq gene 375076 375546 . - . ID=gene366;Name=YPC_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01840;old_locus_tag=YPC_0397 NC_017265.1 Protein Homology CDS 375076 375546 . - 0 ID=cds350;Parent=gene366;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11 NC_017265.1 RefSeq gene 375768 376645 . + . ID=gene367;Name=YPC_RS01845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS01845;pseudo=true NC_017265.1 Protein Homology CDS 375768 376645 . + 0 ID=cds351;Parent=gene367;Note=catalyzes the hydrolysis of phosphatidylcholine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phospholipase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 376723 378555 . + . ID=gene368;Name=YPC_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01850;old_locus_tag=YPC_0400 NC_017265.1 Protein Homology CDS 376723 378555 . + 0 ID=cds352;Parent=gene368;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NC_017265.1 RefSeq gene 378662 379282 . + . ID=gene369;Name=YPC_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01855;old_locus_tag=YPC_0401 NC_017265.1 Protein Homology CDS 378662 379282 . + 0 ID=cds353;Parent=gene369;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11 NC_017265.1 RefSeq gene 379333 379953 . - . ID=gene370;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YPC_RS01860;old_locus_tag=YPC_0402 NC_017265.1 Protein Homology CDS 379333 379953 . - 0 ID=cds354;Parent=gene370;Dbxref=Genbank:WP_002211486.1;Name=WP_002211486.1;gbkey=CDS;gene=rhtB;product=threonine transporter RhtB;protein_id=WP_002211486.1;transl_table=11 NC_017265.1 RefSeq gene 380149 381162 . + . ID=gene371;Name=YPC_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01865;old_locus_tag=YPC_0403 NC_017265.1 Protein Homology CDS 380149 381162 . + 0 ID=cds355;Parent=gene371;Dbxref=Genbank:WP_002211487.1;Name=WP_002211487.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NC_017265.1 RefSeq gene 381197 382006 . + . ID=gene372;Name=YPC_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01870;old_locus_tag=YPC_0404 NC_017265.1 Protein Homology CDS 381197 382006 . + 0 ID=cds356;Parent=gene372;Dbxref=Genbank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211488.1;transl_table=11 NC_017265.1 RefSeq gene 382283 383482 . + . ID=gene373;Name=YPC_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01875;old_locus_tag=YPC_0405 NC_017265.1 Protein Homology CDS 382283 383482 . + 0 ID=cds357;Parent=gene373;Dbxref=Genbank:WP_002366764.1;Name=WP_002366764.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_002366764.1;transl_table=11 NC_017265.1 RefSeq gene 383556 384671 . - . ID=gene374;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YPC_RS01880;old_locus_tag=YPC_0406 NC_017265.1 Protein Homology CDS 383556 384671 . - 0 ID=cds358;Parent=gene374;Dbxref=Genbank:WP_002211490.1;Name=WP_002211490.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NC_017265.1 RefSeq gene 385024 385122 . + . ID=gene375;Name=YPC_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01885;old_locus_tag=YPC_0407 NC_017265.1 Protein Homology CDS 385024 385122 . + 0 ID=cds359;Parent=gene375;Dbxref=Genbank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002216569.1;transl_table=11 NC_017265.1 RefSeq gene 385296 386951 . + . ID=gene376;Name=YPC_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01890 NC_017265.1 Protein Homology CDS 385296 386951 . + 0 ID=cds360;Parent=gene376;Dbxref=Genbank:WP_002211491.1;Name=WP_002211491.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002211491.1;transl_table=11 NC_017265.1 RefSeq gene 386941 388215 . + . ID=gene377;Name=YPC_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01895 NC_017265.1 Protein Homology CDS 386941 388215 . + 0 ID=cds361;Parent=gene377;Dbxref=Genbank:WP_002211492.1;Name=WP_002211492.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_002211492.1;transl_table=11 NC_017265.1 RefSeq gene 388212 389507 . + . ID=gene378;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YPC_RS01900 NC_017265.1 Protein Homology CDS 388212 389507 . + 0 ID=cds362;Parent=gene378;Dbxref=Genbank:WP_002211493.1;Name=WP_002211493.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_002211493.1;transl_table=11 NC_017265.1 RefSeq gene 389669 390196 . - . ID=gene379;Name=YPC_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01905;old_locus_tag=YPC_0411 NC_017265.1 Protein Homology CDS 389669 390196 . - 0 ID=cds363;Parent=gene379;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11 NC_017265.1 RefSeq gene 390326 390994 . - . ID=gene380;Name=YPC_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01910;old_locus_tag=YPC_0412 NC_017265.1 Protein Homology CDS 390326 390994 . - 0 ID=cds364;Parent=gene380;Dbxref=Genbank:WP_002211495.1;Name=WP_002211495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211495.1;transl_table=11 NC_017265.1 RefSeq gene 391278 391532 . + . ID=gene381;Name=YPC_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01915;old_locus_tag=YPC_0413 NC_017265.1 Protein Homology CDS 391278 391532 . + 0 ID=cds365;Parent=gene381;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NC_017265.1 RefSeq gene 391632 393997 . - . ID=gene382;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=pseudogene;locus_tag=YPC_RS01920;pseudo=true NC_017265.1 Protein Homology CDS 391632 393997 . - 0 ID=cds366;Parent=gene382;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=zntA;product=zinc ABC transporter ATPase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 394411 395037 . - . ID=gene383;Name=YPC_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01925;old_locus_tag=YPC_0416 NC_017265.1 Protein Homology CDS 394411 395037 . - 0 ID=cds367;Parent=gene383;Dbxref=Genbank:WP_002211498.1;Name=WP_002211498.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211498.1;transl_table=11 NC_017265.1 RefSeq gene 395327 395647 . + . ID=gene384;Name=YPC_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01930;old_locus_tag=YPC_0417 NC_017265.1 Protein Homology CDS 395327 395647 . + 0 ID=cds368;Parent=gene384;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11 NC_017265.1 RefSeq gene 395859 396278 . + . ID=gene385;Name=YPC_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01935;old_locus_tag=YPC_0418 NC_017265.1 Protein Homology CDS 395859 396278 . + 0 ID=cds369;Parent=gene385;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11 NC_017265.1 RefSeq gene 396465 396737 . - . ID=gene386;Name=YPC_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01940;old_locus_tag=YPC_0419 NC_017265.1 Protein Homology CDS 396465 396737 . - 0 ID=cds370;Parent=gene386;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11 NC_017265.1 RefSeq gene 396727 397389 . - . ID=gene387;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YPC_RS01945;old_locus_tag=YPC_0420 NC_017265.1 Protein Homology CDS 396727 397389 . - 0 ID=cds371;Parent=gene387;Dbxref=Genbank:WP_002211502.1;Name=WP_002211502.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_002211502.1;transl_table=11 NC_017265.1 RefSeq gene 397499 397642 . - . ID=gene388;Name=YPC_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01950 NC_017265.1 Protein Homology CDS 397499 397642 . - 0 ID=cds372;Parent=gene388;Dbxref=Genbank:WP_002215975.1;Name=WP_002215975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215975.1;transl_table=11 NC_017265.1 RefSeq gene 397671 399323 . + . ID=gene389;Name=YPC_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01955;old_locus_tag=YPC_0421 NC_017265.1 Protein Homology CDS 397671 399323 . + 0 ID=cds373;Parent=gene389;Dbxref=Genbank:WP_002222157.1;Name=WP_002222157.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_002222157.1;transl_table=11 NC_017265.1 RefSeq gene 399329 399997 . + . ID=gene390;Name=YPC_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01960;old_locus_tag=YPC_0422 NC_017265.1 Protein Homology CDS 399329 399997 . + 0 ID=cds374;Parent=gene390;Dbxref=Genbank:WP_002211504.1;Name=WP_002211504.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_002211504.1;transl_table=11 NC_017265.1 RefSeq gene 399987 400940 . + . ID=gene391;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YPC_RS01965;old_locus_tag=YPC_0423 NC_017265.1 Protein Homology CDS 399987 400940 . + 0 ID=cds375;Parent=gene391;Dbxref=Genbank:WP_002211505.1;Name=WP_002211505.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NC_017265.1 RefSeq gene 401251 402108 . + . ID=gene392;Name=YPC_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01970;old_locus_tag=YPC_0425 NC_017265.1 Protein Homology CDS 401251 402108 . + 0 ID=cds376;Parent=gene392;Dbxref=Genbank:WP_002211506.1;Name=WP_002211506.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_002211506.1;transl_table=11 NC_017265.1 RefSeq gene 402162 402332 . + . ID=gene393;Name=YPC_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01975 NC_017265.1 Protein Homology CDS 402162 402332 . + 0 ID=cds377;Parent=gene393;Dbxref=Genbank:WP_029787950.1;Name=WP_029787950.1;gbkey=CDS;product=transposase;protein_id=WP_029787950.1;transl_table=11 NC_017265.1 RefSeq repeat_region 402171 402892 . + . ID=id35;gbkey=repeat_region NC_017265.1 RefSeq gene 402322 402780 . + . ID=gene394;Name=YPC_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01980;old_locus_tag=YPC_0427 NC_017265.1 Protein Homology CDS 402322 402780 . + 0 ID=cds378;Parent=gene394;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 403026 403418 . - . ID=gene395;Name=YPC_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01985;old_locus_tag=YPC_0428 NC_017265.1 Protein Homology CDS 403026 403418 . - 0 ID=cds379;Parent=gene395;Dbxref=Genbank:WP_002211507.1;Name=WP_002211507.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002211507.1;transl_table=11 NC_017265.1 RefSeq gene 403840 404955 . + . ID=gene396;Name=YPC_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01990;old_locus_tag=YPC_0430 NC_017265.1 Protein Homology CDS 403840 404955 . + 0 ID=cds380;Parent=gene396;Dbxref=Genbank:WP_002211508.1;Name=WP_002211508.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002211508.1;transl_table=11 NC_017265.1 RefSeq gene 405136 406062 . + . ID=gene397;Name=YPC_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS01995;old_locus_tag=YPC_0431 NC_017265.1 Protein Homology CDS 405136 406062 . + 0 ID=cds381;Parent=gene397;Dbxref=Genbank:WP_002211509.1;Name=WP_002211509.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_002211509.1;transl_table=11 NC_017265.1 RefSeq gene 406059 407345 . + . ID=gene398;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YPC_RS02000;old_locus_tag=YPC_0432 NC_017265.1 Protein Homology CDS 406059 407345 . + 0 ID=cds382;Parent=gene398;Dbxref=Genbank:WP_002211510.1;Name=WP_002211510.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_002211510.1;transl_table=11 NC_017265.1 RefSeq gene 407342 408109 . + . ID=gene399;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YPC_RS02005;old_locus_tag=YPC_0433 NC_017265.1 Protein Homology CDS 407342 408109 . + 0 ID=cds383;Parent=gene399;Dbxref=Genbank:WP_002211511.1;Name=WP_002211511.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211511.1;transl_table=11 NC_017265.1 RefSeq gene 408154 408855 . + . ID=gene400;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YPC_RS02010;old_locus_tag=YPC_0434 NC_017265.1 Protein Homology CDS 408154 408855 . + 0 ID=cds384;Parent=gene400;Dbxref=Genbank:WP_002211512.1;Name=WP_002211512.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211512.1;transl_table=11 NC_017265.1 RefSeq gene 409083 409544 . + . ID=gene401;Name=YPC_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02015;old_locus_tag=YPC_0435 NC_017265.1 Protein Homology CDS 409083 409544 . + 0 ID=cds385;Parent=gene401;Dbxref=Genbank:WP_002211513.1;Name=WP_002211513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211513.1;transl_table=11 NC_017265.1 RefSeq gene 409659 410765 . - . ID=gene402;Name=YPC_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02020;old_locus_tag=YPC_0436 NC_017265.1 Protein Homology CDS 409659 410765 . - 0 ID=cds386;Parent=gene402;Dbxref=Genbank:WP_002211514.1;Name=WP_002211514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211514.1;transl_table=11 NC_017265.1 RefSeq gene 410829 411347 . - . ID=gene403;Name=YPC_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02025;old_locus_tag=YPC_0437 NC_017265.1 Protein Homology CDS 410829 411347 . - 0 ID=cds387;Parent=gene403;Dbxref=Genbank:WP_002211515.1;Name=WP_002211515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211515.1;transl_table=11 NC_017265.1 RefSeq gene 411409 412056 . - . ID=gene404;Name=YPC_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02030 NC_017265.1 Protein Homology CDS 411409 412056 . - 0 ID=cds388;Parent=gene404;Dbxref=Genbank:WP_002211516.1;Name=WP_002211516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211516.1;transl_table=11 NC_017265.1 RefSeq gene 412028 412714 . - . ID=gene405;Name=YPC_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02035 NC_017265.1 Protein Homology CDS 412028 412714 . - 0 ID=cds389;Parent=gene405;Dbxref=Genbank:WP_002211517.1;Name=WP_002211517.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211517.1;transl_table=11 NC_017265.1 RefSeq gene 412732 415064 . - . ID=gene406;Name=YPC_RS02040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS02040;pseudo=true NC_017265.1 Protein Homology CDS 412732 415064 . - 0 ID=cds390;Parent=gene406;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alpha-related fimbriae usher protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 415331 415822 . - . ID=gene407;Name=YPC_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02045;old_locus_tag=YPC_0442 NC_017265.1 Protein Homology CDS 415331 415822 . - 0 ID=cds391;Parent=gene407;Dbxref=Genbank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228181.1;transl_table=11 NC_017265.1 RefSeq gene 416377 417696 . + . ID=gene408;Name=YPC_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02050;old_locus_tag=YPC_0443 NC_017265.1 Protein Homology CDS 416377 417696 . + 0 ID=cds392;Parent=gene408;Dbxref=Genbank:WP_002211520.1;Name=WP_002211520.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_002211520.1;transl_table=11 NC_017265.1 RefSeq gene 417994 418881 . + . ID=gene409;Name=YPC_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02055;old_locus_tag=YPC_0444 NC_017265.1 Protein Homology CDS 417994 418881 . + 0 ID=cds393;Parent=gene409;Dbxref=Genbank:WP_002211521.1;Name=WP_002211521.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211521.1;transl_table=11 NC_017265.1 RefSeq gene 418878 419723 . + . ID=gene410;Name=YPC_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02060;old_locus_tag=YPC_0445 NC_017265.1 Protein Homology CDS 418878 419723 . + 0 ID=cds394;Parent=gene410;Dbxref=Genbank:WP_002211522.1;Name=WP_002211522.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211522.1;transl_table=11 NC_017265.1 RefSeq gene 419730 420803 . + . ID=gene411;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YPC_RS02065;old_locus_tag=YPC_0446 NC_017265.1 Protein Homology CDS 419730 420803 . + 0 ID=cds395;Parent=gene411;Dbxref=Genbank:WP_002211523.1;Name=WP_002211523.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_002211523.1;transl_table=11 NC_017265.1 RefSeq gene 420800 421549 . + . ID=gene412;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YPC_RS02070;old_locus_tag=YPC_0447 NC_017265.1 Protein Homology CDS 420800 421549 . + 0 ID=cds396;Parent=gene412;Dbxref=Genbank:WP_002211524.1;Name=WP_002211524.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211524.1;transl_table=11 NC_017265.1 RefSeq gene 421650 422606 . + . ID=gene413;Name=YPC_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02075;old_locus_tag=YPC_0448 NC_017265.1 Protein Homology CDS 421650 422606 . + 0 ID=cds397;Parent=gene413;Dbxref=Genbank:WP_002224020.1;Name=WP_002224020.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224020.1;transl_table=11 NC_017265.1 RefSeq gene 422959 423858 . + . ID=gene414;Name=YPC_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02080;old_locus_tag=YPC_0449 NC_017265.1 Protein Homology CDS 422959 423858 . + 0 ID=cds398;Parent=gene414;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11 NC_017265.1 RefSeq gene 423746 424699 . - . ID=gene415;Name=YPC_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02085;old_locus_tag=YPC_0450 NC_017265.1 Protein Homology CDS 423746 424699 . - 0 ID=cds399;Parent=gene415;Dbxref=Genbank:WP_002211525.1;Name=WP_002211525.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211525.1;transl_table=11 NC_017265.1 RefSeq gene 424790 427081 . + . ID=gene416;Name=YPC_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02090;old_locus_tag=YPC_0451 NC_017265.1 Protein Homology CDS 424790 427081 . + 0 ID=cds400;Parent=gene416;Dbxref=Genbank:WP_002220853.1;Name=WP_002220853.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_002220853.1;transl_table=11 NC_017265.1 RefSeq gene 427136 428008 . - . ID=gene417;Name=YPC_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02095;old_locus_tag=YPC_0452 NC_017265.1 Protein Homology CDS 427136 428008 . - 0 ID=cds401;Parent=gene417;Dbxref=Genbank:WP_002211527.1;Name=WP_002211527.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_002211527.1;transl_table=11 NC_017265.1 RefSeq gene 428436 429197 . + . ID=gene418;Name=YPC_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02100;old_locus_tag=YPC_0453 NC_017265.1 Protein Homology CDS 428436 429197 . + 0 ID=cds402;Parent=gene418;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NC_017265.1 RefSeq gene 429318 430148 . + . ID=gene419;Name=YPC_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02105;old_locus_tag=YPC_0454 NC_017265.1 Protein Homology CDS 429318 430148 . + 0 ID=cds403;Parent=gene419;Dbxref=Genbank:WP_002228183.1;Name=WP_002228183.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228183.1;transl_table=11 NC_017265.1 RefSeq gene 430512 432323 . + . ID=gene420;Name=YPC_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02110;old_locus_tag=YPC_0455 NC_017265.1 Protein Homology CDS 430512 432323 . + 0 ID=cds404;Parent=gene420;Dbxref=Genbank:WP_002211530.1;Name=WP_002211530.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_002211530.1;transl_table=11 NC_017265.1 RefSeq gene 432595 433125 . + . ID=gene421;Name=YPC_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02115;old_locus_tag=YPC_0456 NC_017265.1 Protein Homology CDS 432595 433125 . + 0 ID=cds405;Parent=gene421;Dbxref=Genbank:WP_002211531.1;Name=WP_002211531.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002211531.1;transl_table=11 NC_017265.1 RefSeq gene 433333 434838 . + . ID=gene422;Name=YPC_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02120;old_locus_tag=YPC_0457 NC_017265.1 Protein Homology CDS 433333 434838 . + 0 ID=cds406;Parent=gene422;Dbxref=Genbank:WP_002211532.1;Name=WP_002211532.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_002211532.1;transl_table=11 NC_017265.1 RefSeq gene 434928 435683 . + . ID=gene423;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YPC_RS02125;old_locus_tag=YPC_0458 NC_017265.1 Protein Homology CDS 434928 435683 . + 0 ID=cds407;Parent=gene423;Dbxref=Genbank:WP_002224024.1;Name=WP_002224024.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002224024.1;transl_table=11 NC_017265.1 RefSeq gene 435697 436347 . + . ID=gene424;Name=YPC_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02130;old_locus_tag=YPC_0459 NC_017265.1 Protein Homology CDS 435697 436347 . + 0 ID=cds408;Parent=gene424;Dbxref=Genbank:WP_002215928.1;Name=WP_002215928.1;gbkey=CDS;product=sterol-binding protein;protein_id=WP_002215928.1;transl_table=11 NC_017265.1 RefSeq gene 436347 437978 . + . ID=gene425;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=YPC_RS02135;old_locus_tag=YPC_0460 NC_017265.1 Protein Homology CDS 436347 437978 . + 0 ID=cds409;Parent=gene425;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11 NC_017265.1 RefSeq gene 438158 438424 . + . ID=gene426;Name=YPC_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02140;old_locus_tag=YPC_0461 NC_017265.1 Protein Homology CDS 438158 438424 . + 0 ID=cds410;Parent=gene426;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11 NC_017265.1 RefSeq gene 438428 439090 . + . ID=gene427;Name=YPC_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02145;old_locus_tag=YPC_0462 NC_017265.1 Protein Homology CDS 438428 439090 . + 0 ID=cds411;Parent=gene427;Dbxref=Genbank:WP_002211537.1;Name=WP_002211537.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_002211537.1;transl_table=11 NC_017265.1 RefSeq gene 439093 439869 . + . ID=gene428;Name=YPC_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02150;old_locus_tag=YPC_0463 NC_017265.1 Protein Homology CDS 439093 439869 . + 0 ID=cds412;Parent=gene428;Dbxref=Genbank:WP_015683528.1;Name=WP_015683528.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_015683528.1;transl_table=11 NC_017265.1 RefSeq gene 439925 440464 . + . ID=gene429;Name=YPC_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02155;old_locus_tag=YPC_0464 NC_017265.1 Protein Homology CDS 439925 440464 . + 0 ID=cds413;Parent=gene429;Dbxref=Genbank:WP_002211539.1;Name=WP_002211539.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211539.1;transl_table=11 NC_017265.1 RefSeq repeat_region 440403 442360 . + . ID=id36;gbkey=repeat_region NC_017265.1 RefSeq gene 440491 441513 . + . ID=gene430;Name=YPC_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02160;old_locus_tag=YPC_0466 NC_017265.1 Protein Homology CDS 440491 441513 . + 0 ID=cds414;Parent=gene430;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 441513 442292 . + . ID=gene431;Name=YPC_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02165;old_locus_tag=YPC_0467 NC_017265.1 Protein Homology CDS 441513 442292 . + 0 ID=cds415;Parent=gene431;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 442331 442666 . + . ID=gene432;Name=YPC_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02170;old_locus_tag=YPC_0468 NC_017265.1 Protein Homology CDS 442331 442666 . + 0 ID=cds416;Parent=gene432;Dbxref=Genbank:WP_002211540.1;Name=WP_002211540.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211540.1;transl_table=11 NC_017265.1 RefSeq gene 442681 443703 . + . ID=gene433;Name=YPC_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02175;old_locus_tag=YPC_0469 NC_017265.1 Protein Homology CDS 442681 443703 . + 0 ID=cds417;Parent=gene433;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11 NC_017265.1 RefSeq gene 443813 444301 . - . ID=gene434;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YPC_RS02180;old_locus_tag=YPC_0470 NC_017265.1 Protein Homology CDS 443813 444301 . - 0 ID=cds418;Parent=gene434;Dbxref=Genbank:WP_002211542.1;Name=WP_002211542.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_002211542.1;transl_table=11 NC_017265.1 RefSeq gene 444549 446045 . + . ID=gene435;Name=YPC_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02185;old_locus_tag=YPC_0471 NC_017265.1 Protein Homology CDS 444549 446045 . + 0 ID=cds419;Parent=gene435;Dbxref=Genbank:WP_002215917.1;Name=WP_002215917.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002215917.1;transl_table=11 NC_017265.1 RefSeq gene 446100 446801 . + . ID=gene436;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=YPC_RS02190;old_locus_tag=YPC_0472 NC_017265.1 Protein Homology CDS 446100 446801 . + 0 ID=cds420;Parent=gene436;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11 NC_017265.1 RefSeq gene 446961 448124 . - . ID=gene437;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YPC_RS02195;old_locus_tag=YPC_0473 NC_017265.1 Protein Homology CDS 446961 448124 . - 0 ID=cds421;Parent=gene437;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11 NC_017265.1 RefSeq gene 448136 450325 . - . ID=gene438;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YPC_RS02200;old_locus_tag=YPC_0474 NC_017265.1 Protein Homology CDS 448136 450325 . - 0 ID=cds422;Parent=gene438;Dbxref=Genbank:WP_015683529.1;Name=WP_015683529.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=WP_015683529.1;transl_table=11 NC_017265.1 RefSeq gene 450652 451983 . + . ID=gene439;Name=YPC_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02205;old_locus_tag=YPC_0475 NC_017265.1 Protein Homology CDS 450652 451983 . + 0 ID=cds423;Parent=gene439;Dbxref=Genbank:WP_002211547.1;Name=WP_002211547.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_002211547.1;transl_table=11 NC_017265.1 RefSeq gene 451983 452192 . + . ID=gene440;Name=YPC_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02210;old_locus_tag=YPC_0476 NC_017265.1 Protein Homology CDS 451983 452192 . + 0 ID=cds424;Parent=gene440;Dbxref=Genbank:WP_002211548.1;Name=WP_002211548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211548.1;transl_table=11 NC_017265.1 RefSeq repeat_region 452144 452866 . + . ID=id37;gbkey=repeat_region NC_017265.1 RefSeq gene 452297 452755 . + . ID=gene441;Name=YPC_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02215;old_locus_tag=YPC_0477 NC_017265.1 Protein Homology CDS 452297 452755 . + 0 ID=cds425;Parent=gene441;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 452828 453304 . + . ID=gene442;Name=YPC_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02220;old_locus_tag=YPC_0478 NC_017265.1 Protein Homology CDS 452828 453304 . + 0 ID=cds426;Parent=gene442;Dbxref=Genbank:WP_002211549.1;Name=WP_002211549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211549.1;transl_table=11 NC_017265.1 RefSeq gene 453344 454795 . + . ID=gene443;Name=YPC_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02225;old_locus_tag=YPC_0479 NC_017265.1 Protein Homology CDS 453344 454795 . + 0 ID=cds427;Parent=gene443;Dbxref=Genbank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;product=potassium transporter;protein_id=WP_002211550.1;transl_table=11 NC_017265.1 RefSeq gene 454817 455350 . + . ID=gene444;Name=YPC_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02230;old_locus_tag=YPC_0480 NC_017265.1 Protein Homology CDS 454817 455350 . + 0 ID=cds428;Parent=gene444;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11 NC_017265.1 RefSeq repeat_region 455376 461099 . + . ID=id38;gbkey=repeat_region NC_017265.1 RefSeq gene 455822 457370 . + . ID=gene445;Name=YPC_RS02240;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS02240;old_locus_tag=YPC_0482 NC_017265.1 RefSeq rRNA 455822 457370 . + . ID=rna16;Parent=gene445;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq exon 455822 457370 . + . ID=id39;Parent=rna16;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq gene 457470 457546 . + . ID=gene446;Name=YPC_RS02245;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02245;old_locus_tag=YPC_0483 NC_017265.1 tRNAscan-SE tRNA 457470 457546 . + . ID=rna17;Parent=gene446;anticodon=(pos:457504..457506);gbkey=tRNA;product=tRNA-Ile NC_017265.1 tRNAscan-SE exon 457470 457546 . + . ID=id40;Parent=rna17;anticodon=(pos:457504..457506);gbkey=tRNA;product=tRNA-Ile NC_017265.1 RefSeq gene 457598 457673 . + . ID=gene447;Name=YPC_RS02250;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02250;old_locus_tag=YPC_0484 NC_017265.1 tRNAscan-SE tRNA 457598 457673 . + . ID=rna18;Parent=gene447;anticodon=(pos:457631..457633);gbkey=tRNA;product=tRNA-Ala NC_017265.1 tRNAscan-SE exon 457598 457673 . + . ID=id41;Parent=rna18;anticodon=(pos:457631..457633);gbkey=tRNA;product=tRNA-Ala NC_017265.1 RefSeq gene 457883 460816 . + . ID=gene448;Name=YPC_RS02255;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS02255;old_locus_tag=YPC_0485 NC_017265.1 RefSeq rRNA 457883 460816 . + . ID=rna19;Parent=gene448;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq exon 457883 460816 . + . ID=id42;Parent=rna19;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq gene 460908 461023 . + . ID=gene449;Name=YPC_RS02260;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS02260;old_locus_tag=YPC_0486 NC_017265.1 cmsearch rRNA 460908 461023 . + . ID=rna20;Parent=gene449;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 460908 461023 . + . ID=id43;Parent=rna20;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 461487 462524 . + . ID=gene450;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YPC_RS02265 NC_017265.1 Protein Homology CDS 461487 462524 . + 0 ID=cds429;Parent=gene450;Dbxref=Genbank:WP_002212288.1;Name=WP_002212288.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_002212288.1;transl_table=11 NC_017265.1 RefSeq gene 462521 463480 . + . ID=gene451;Name=YPC_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02270 NC_017265.1 Protein Homology CDS 462521 463480 . + 0 ID=cds430;Parent=gene451;Dbxref=Genbank:WP_002212289.1;Name=WP_002212289.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_002212289.1;transl_table=11 NC_017265.1 RefSeq gene 463515 464465 . - . ID=gene452;Name=YPC_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02275;old_locus_tag=YPC_0489 NC_017265.1 Protein Homology CDS 463515 464465 . - 0 ID=cds431;Parent=gene452;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NC_017265.1 RefSeq gene 464676 465227 . - . ID=gene453;Name=YPC_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02280;old_locus_tag=YPC_0490 NC_017265.1 Protein Homology CDS 464676 465227 . - 0 ID=cds432;Parent=gene453;Dbxref=Genbank:WP_002217850.1;Name=WP_002217850.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002217850.1;transl_table=11 NC_017265.1 RefSeq repeat_region 465229 467188 . + . ID=id44;gbkey=repeat_region NC_017265.1 RefSeq gene 465317 466339 . + . ID=gene454;Name=YPC_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02285;old_locus_tag=YPC_0492 NC_017265.1 Protein Homology CDS 465317 466339 . + 0 ID=cds433;Parent=gene454;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 466339 467118 . + . ID=gene455;Name=YPC_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02290;old_locus_tag=YPC_0493 NC_017265.1 Protein Homology CDS 466339 467118 . + 0 ID=cds434;Parent=gene455;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 467582 467657 . + . ID=gene456;Name=YPC_RS02295;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02295;old_locus_tag=YPC_0494 NC_017265.1 tRNAscan-SE tRNA 467582 467657 . + . ID=rna21;Parent=gene456;anticodon=(pos:467615..467617);gbkey=tRNA;product=tRNA-Thr NC_017265.1 tRNAscan-SE exon 467582 467657 . + . ID=id45;Parent=rna21;anticodon=(pos:467615..467617);gbkey=tRNA;product=tRNA-Thr NC_017265.1 RefSeq gene 467676 467760 . + . ID=gene457;Name=YPC_RS02300;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02300;old_locus_tag=YPC_0495 NC_017265.1 tRNAscan-SE tRNA 467676 467760 . + . ID=rna22;Parent=gene457;anticodon=(pos:467710..467712);gbkey=tRNA;product=tRNA-Tyr NC_017265.1 tRNAscan-SE exon 467676 467760 . + . ID=id46;Parent=rna22;anticodon=(pos:467710..467712);gbkey=tRNA;product=tRNA-Tyr NC_017265.1 RefSeq gene 467910 467984 . + . ID=gene458;Name=YPC_RS02305;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02305;old_locus_tag=YPC_0496 NC_017265.1 tRNAscan-SE tRNA 467910 467984 . + . ID=rna23;Parent=gene458;anticodon=(pos:467943..467945);gbkey=tRNA;product=tRNA-Gly NC_017265.1 tRNAscan-SE exon 467910 467984 . + . ID=id47;Parent=rna23;anticodon=(pos:467943..467945);gbkey=tRNA;product=tRNA-Gly NC_017265.1 RefSeq gene 467991 468066 . + . ID=gene459;Name=YPC_RS02310;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02310;old_locus_tag=YPC_0497 NC_017265.1 tRNAscan-SE tRNA 467991 468066 . + . ID=rna24;Parent=gene459;anticodon=(pos:468024..468026);gbkey=tRNA;product=tRNA-Thr NC_017265.1 tRNAscan-SE exon 467991 468066 . + . ID=id48;Parent=rna24;anticodon=(pos:468024..468026);gbkey=tRNA;product=tRNA-Thr NC_017265.1 RefSeq gene 468175 469359 . + . ID=gene460;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPC_RS02315;old_locus_tag=YPC_0498 NC_017265.1 Protein Homology CDS 468175 469359 . + 0 ID=cds435;Parent=gene460;Dbxref=Genbank:WP_002210669.1;Name=WP_002210669.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NC_017265.1 RefSeq gene 469610 469993 . + . ID=gene461;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=YPC_RS02320;old_locus_tag=YPC_0499 NC_017265.1 Protein Homology CDS 469610 469993 . + 0 ID=cds436;Parent=gene461;Dbxref=Genbank:WP_002210670.1;Name=WP_002210670.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NC_017265.1 RefSeq gene 469995 470540 . + . ID=gene462;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YPC_RS02325;old_locus_tag=YPC_0500 NC_017265.1 Protein Homology CDS 469995 470540 . + 0 ID=cds437;Parent=gene462;Dbxref=Genbank:WP_002210671.1;Name=WP_002210671.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NC_017265.1 RefSeq gene 470731 471159 . + . ID=gene463;Name=YPC_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02330;old_locus_tag=YPC_0501 NC_017265.1 Protein Homology CDS 470731 471159 . + 0 ID=cds438;Parent=gene463;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NC_017265.1 RefSeq gene 471163 471867 . + . ID=gene464;Name=YPC_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02335;old_locus_tag=YPC_0502 NC_017265.1 Protein Homology CDS 471163 471867 . + 0 ID=cds439;Parent=gene464;Dbxref=Genbank:WP_002210673.1;Name=WP_002210673.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NC_017265.1 RefSeq gene 472232 472729 . + . ID=gene465;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YPC_RS02340;old_locus_tag=YPC_0503 NC_017265.1 Protein Homology CDS 472232 472729 . + 0 ID=cds440;Parent=gene465;Dbxref=Genbank:WP_002210674.1;Name=WP_002210674.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NC_017265.1 RefSeq gene 472796 473164 . + . ID=gene466;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YPC_RS02345;old_locus_tag=YPC_0504 NC_017265.1 Protein Homology CDS 472796 473164 . + 0 ID=cds441;Parent=gene466;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NC_017265.1 RefSeq gene 473507 477535 . + . ID=gene467;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YPC_RS02350;old_locus_tag=YPC_0505 NC_017265.1 Protein Homology CDS 473507 477535 . + 0 ID=cds442;Parent=gene467;Dbxref=Genbank:WP_015683531.1;Name=WP_015683531.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_015683531.1;transl_table=11 NC_017265.1 RefSeq gene 477664 481884 . + . ID=gene468;Name=YPC_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02355;old_locus_tag=YPC_0506 NC_017265.1 Protein Homology CDS 477664 481884 . + 0 ID=cds443;Parent=gene468;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NC_017265.1 RefSeq repeat_region 481900 482622 . + . ID=id49;gbkey=repeat_region NC_017265.1 RefSeq gene 482011 482469 . - . ID=gene469;Name=YPC_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02360;old_locus_tag=YPC_0507 NC_017265.1 Protein Homology CDS 482011 482469 . - 0 ID=cds444;Parent=gene469;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 482459 482626 . - . ID=gene470;Name=YPC_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02365 NC_017265.1 Protein Homology CDS 482459 482626 . - 0 ID=cds445;Parent=gene470;Dbxref=Genbank:WP_002217271.1;Name=WP_002217271.1;gbkey=CDS;product=invasin;protein_id=WP_002217271.1;transl_table=11 NC_017265.1 RefSeq gene 482745 482858 . + . ID=gene471;Name=YPC_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02370 NC_017265.1 Protein Homology CDS 482745 482858 . + 0 ID=cds446;Parent=gene471;Dbxref=Genbank:WP_002224232.1;Name=WP_002224232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224232.1;transl_table=11 NC_017265.1 RefSeq gene 482901 484031 . - . ID=gene472;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YPC_RS02375 NC_017265.1 Protein Homology CDS 482901 484031 . - 0 ID=cds447;Parent=gene472;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11 NC_017265.1 RefSeq gene 484024 484839 . - . ID=gene473;Name=YPC_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02380 NC_017265.1 Protein Homology CDS 484024 484839 . - 0 ID=cds448;Parent=gene473;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NC_017265.1 RefSeq gene 484841 485056 . - . ID=gene474;Name=YPC_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02385 NC_017265.1 Protein Homology CDS 484841 485056 . - 0 ID=cds449;Parent=gene474;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11 NC_017265.1 RefSeq gene 485053 485850 . - . ID=gene475;Name=YPC_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02390 NC_017265.1 Protein Homology CDS 485053 485850 . - 0 ID=cds450;Parent=gene475;Dbxref=Genbank:WP_002210680.1;Name=WP_002210680.1;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=WP_002210680.1;transl_table=11 NC_017265.1 RefSeq gene 485840 486514 . - . ID=gene476;Name=YPC_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02395 NC_017265.1 Protein Homology CDS 485840 486514 . - 0 ID=cds451;Parent=gene476;Dbxref=Genbank:WP_002210681.1;Name=WP_002210681.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_002210681.1;transl_table=11 NC_017265.1 RefSeq gene 486501 488546 . - . ID=gene477;Name=YPC_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02400;old_locus_tag=YPC_0514 NC_017265.1 Protein Homology CDS 486501 488546 . - 0 ID=cds452;Parent=gene477;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11 NC_017265.1 RefSeq gene 488539 488799 . - . ID=gene478;Name=YPC_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02405 NC_017265.1 Protein Homology CDS 488539 488799 . - 0 ID=cds453;Parent=gene478;Dbxref=Genbank:WP_002228187.1;Name=WP_002228187.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228187.1;transl_table=11 NC_017265.1 RefSeq gene 488922 489431 . - . ID=gene479;Name=YPC_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02410;old_locus_tag=YPC_0515 NC_017265.1 Protein Homology CDS 488922 489431 . - 0 ID=cds454;Parent=gene479;Dbxref=Genbank:WP_002210683.1;Name=WP_002210683.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_002210683.1;transl_table=11 NC_017265.1 RefSeq gene 489528 490310 . + . ID=gene480;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YPC_RS02415;old_locus_tag=YPC_0516 NC_017265.1 Protein Homology CDS 489528 490310 . + 0 ID=cds455;Parent=gene480;Dbxref=Genbank:WP_002210684.1;Name=WP_002210684.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_002210684.1;transl_table=11 NC_017265.1 RefSeq gene 490445 491188 . + . ID=gene481;Name=YPC_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02420;old_locus_tag=YPC_0517 NC_017265.1 Protein Homology CDS 490445 491188 . + 0 ID=cds456;Parent=gene481;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11 NC_017265.1 RefSeq gene 491307 492374 . + . ID=gene482;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YPC_RS02425;old_locus_tag=YPC_0518 NC_017265.1 Protein Homology CDS 491307 492374 . + 0 ID=cds457;Parent=gene482;Dbxref=Genbank:WP_002210686.1;Name=WP_002210686.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_002210686.1;transl_table=11 NC_017265.1 RefSeq gene 492440 493144 . + . ID=gene483;Name=YPC_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02430;old_locus_tag=YPC_0519 NC_017265.1 Protein Homology CDS 492440 493144 . + 0 ID=cds458;Parent=gene483;Dbxref=Genbank:WP_002217884.1;Name=WP_002217884.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_002217884.1;transl_table=11 NC_017265.1 RefSeq gene 493190 493780 . + . ID=gene484;Name=YPC_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02435;old_locus_tag=YPC_0520 NC_017265.1 Protein Homology CDS 493190 493780 . + 0 ID=cds459;Parent=gene484;Dbxref=Genbank:WP_002210688.1;Name=WP_002210688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210688.1;transl_table=11 NC_017265.1 RefSeq gene 493969 494244 . + . ID=gene485;Name=YPC_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02440;old_locus_tag=YPC_0522 NC_017265.1 Protein Homology CDS 493969 494244 . + 0 ID=cds460;Parent=gene485;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11 NC_017265.1 RefSeq gene 494294 494947 . + . ID=gene486;Name=YPC_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02445;old_locus_tag=YPC_0523 NC_017265.1 Protein Homology CDS 494294 494947 . + 0 ID=cds461;Parent=gene486;Dbxref=Genbank:WP_002355296.1;Name=WP_002355296.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355296.1;transl_table=11 NC_017265.1 RefSeq gene 495095 496381 . - . ID=gene487;Name=YPC_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02450;old_locus_tag=YPC_0524 NC_017265.1 Protein Homology CDS 495095 496381 . - 0 ID=cds462;Parent=gene487;Dbxref=Genbank:WP_002210691.1;Name=WP_002210691.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_002210691.1;transl_table=11 NC_017265.1 RefSeq gene 496441 498030 . - . ID=gene488;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YPC_RS02455;old_locus_tag=YPC_0525 NC_017265.1 Protein Homology CDS 496441 498030 . - 0 ID=cds463;Parent=gene488;Dbxref=Genbank:WP_002210692.1;Name=WP_002210692.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_002210692.1;transl_table=11 NC_017265.1 RefSeq gene 498188 498418 . + . ID=gene489;Name=YPC_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22050 NC_017265.1 Protein Homology CDS 498188 498418 . + 0 ID=cds464;Parent=gene489;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11 NC_017265.1 RefSeq repeat_region 498320 504271 . + . ID=id50;gbkey=repeat_region NC_017265.1 RefSeq gene 498686 500234 . + . ID=gene490;Name=YPC_RS02465;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS02465;old_locus_tag=YPC_0527 NC_017265.1 RefSeq rRNA 498686 500234 . + . ID=rna25;Parent=gene490;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq exon 498686 500234 . + . ID=id51;Parent=rna25;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq gene 500334 500410 . + . ID=gene491;Name=YPC_RS02470;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02470;old_locus_tag=YPC_0528 NC_017265.1 tRNAscan-SE tRNA 500334 500410 . + . ID=rna26;Parent=gene491;anticodon=(pos:500368..500370);gbkey=tRNA;product=tRNA-Ile NC_017265.1 tRNAscan-SE exon 500334 500410 . + . ID=id52;Parent=rna26;anticodon=(pos:500368..500370);gbkey=tRNA;product=tRNA-Ile NC_017265.1 RefSeq gene 500462 500537 . + . ID=gene492;Name=YPC_RS02475;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02475;old_locus_tag=YPC_0529 NC_017265.1 tRNAscan-SE tRNA 500462 500537 . + . ID=rna27;Parent=gene492;anticodon=(pos:500495..500497);gbkey=tRNA;product=tRNA-Ala NC_017265.1 tRNAscan-SE exon 500462 500537 . + . ID=id53;Parent=rna27;anticodon=(pos:500495..500497);gbkey=tRNA;product=tRNA-Ala NC_017265.1 RefSeq gene 500747 503680 . + . ID=gene493;Name=YPC_RS02480;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS02480;old_locus_tag=YPC_0530 NC_017265.1 RefSeq rRNA 500747 503680 . + . ID=rna28;Parent=gene493;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq exon 500747 503680 . + . ID=id54;Parent=rna28;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq gene 503772 503887 . + . ID=gene494;Name=YPC_RS02485;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS02485;old_locus_tag=YPC_0531 NC_017265.1 cmsearch rRNA 503772 503887 . + . ID=rna29;Parent=gene494;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 503772 503887 . + . ID=id55;Parent=rna29;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 503909 504106 . + . ID=gene495;Name=YPC_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22055 NC_017265.1 Protein Homology CDS 503909 504106 . + 0 ID=cds465;Parent=gene495;Dbxref=Genbank:WP_046155091.1;Name=WP_046155091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155091.1;transl_table=11 NC_017265.1 RefSeq gene 504354 504620 . + . ID=gene496;Name=YPC_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02490;old_locus_tag=YPC_0532 NC_017265.1 Protein Homology CDS 504354 504620 . + 0 ID=cds466;Parent=gene496;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_017265.1 RefSeq gene 504977 505453 . + . ID=gene497;Name=YPC_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02495 NC_017265.1 Protein Homology CDS 504977 505453 . + 0 ID=cds467;Parent=gene497;Dbxref=Genbank:WP_016674092.1;Name=WP_016674092.1;gbkey=CDS;product=integrase;protein_id=WP_016674092.1;transl_table=11 NC_017265.1 RefSeq repeat_region 506057 508014 . + . ID=id56;gbkey=repeat_region NC_017265.1 RefSeq gene 506125 506904 . - . ID=gene498;Name=YPC_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02500;old_locus_tag=YPC_0534 NC_017265.1 Protein Homology CDS 506125 506904 . - 0 ID=cds468;Parent=gene498;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 506904 507926 . - . ID=gene499;Name=YPC_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02505;old_locus_tag=YPC_0535 NC_017265.1 Protein Homology CDS 506904 507926 . - 0 ID=cds469;Parent=gene499;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 507940 511353 . - . ID=gene500;Name=YPC_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02510;old_locus_tag=YPC_0536 NC_017265.1 Protein Homology CDS 507940 511353 . - 0 ID=cds470;Parent=gene500;Dbxref=Genbank:WP_002211631.1;Name=WP_002211631.1;gbkey=CDS;product=peptide synthetase;protein_id=WP_002211631.1;transl_table=11 NC_017265.1 RefSeq gene 511504 513576 . - . ID=gene501;Name=YPC_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02515;old_locus_tag=YPC_0537 NC_017265.1 Protein Homology CDS 511504 513576 . - 0 ID=cds471;Parent=gene501;Dbxref=Genbank:WP_002211632.1;Name=WP_002211632.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_002211632.1;transl_table=11 NC_017265.1 RefSeq gene 513964 515196 . - . ID=gene502;Name=YPC_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02520;old_locus_tag=YPC_0538 NC_017265.1 Protein Homology CDS 513964 515196 . - 0 ID=cds472;Parent=gene502;Dbxref=Genbank:WP_002211633.1;Name=WP_002211633.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_002211633.1;transl_table=11 NC_017265.1 RefSeq gene 515274 516830 . - . ID=gene503;Name=YPC_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02525;old_locus_tag=YPC_0539 NC_017265.1 Protein Homology CDS 515274 516830 . - 0 ID=cds473;Parent=gene503;Dbxref=Genbank:WP_002211634.1;Name=WP_002211634.1;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=WP_002211634.1;transl_table=11 NC_017265.1 RefSeq repeat_region 517457 517681 . + . ID=id57;gbkey=repeat_region NC_017265.1 RefSeq gene 517549 519366 . + . ID=gene504;Name=YPC_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02530;old_locus_tag=YPC_0541 NC_017265.1 Protein Homology CDS 517549 519366 . + 0 ID=cds474;Parent=gene504;Dbxref=Genbank:WP_002211636.1;Name=WP_002211636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211636.1;transl_table=11 NC_017265.1 RefSeq gene 519575 520450 . + . ID=gene505;Name=YPC_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02535;old_locus_tag=YPC_0542 NC_017265.1 Protein Homology CDS 519575 520450 . + 0 ID=cds475;Parent=gene505;Dbxref=Genbank:WP_002214025.1;Name=WP_002214025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214025.1;transl_table=11 NC_017265.1 RefSeq repeat_region 520921 521145 . + . ID=id58;gbkey=repeat_region NC_017265.1 RefSeq gene 521013 522893 . + . ID=gene506;Name=YPC_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02540;old_locus_tag=YPC_0544 NC_017265.1 Protein Homology CDS 521013 522893 . + 0 ID=cds476;Parent=gene506;Dbxref=Genbank:WP_002211637.1;Name=WP_002211637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211637.1;transl_table=11 NC_017265.1 RefSeq gene 522996 526127 . - . ID=gene507;Name=YPC_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02545 NC_017265.1 Protein Homology CDS 522996 526127 . - 0 ID=cds477;Parent=gene507;Dbxref=Genbank:WP_002392746.1;Name=WP_002392746.1;gbkey=CDS;product=transporter;protein_id=WP_002392746.1;transl_table=11 NC_017265.1 RefSeq repeat_region 525948 526576 . + . ID=id59;gbkey=repeat_region NC_017265.1 RefSeq gene 526825 534114 . - . ID=gene508;Name=YPC_RS02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS02550;partial=true;pseudo=true;start_range=.,526825 NC_017265.1 Protein Homology CDS 526825 534114 . - 0 ID=cds478;Parent=gene508;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=autotransporter;pseudo=true;start_range=.,526825;transl_table=11 NC_017265.1 RefSeq repeat_region 526882 527267 . + . ID=id60;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 527911 528366 . + . ID=id61;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 528691 529076 . + . ID=id62;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 529597 530225 . + . ID=id63;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 530555 530883 . + . ID=id64;gbkey=repeat_region NC_017265.1 RefSeq gene 534968 535555 . - . ID=gene509;Name=YPC_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02555;old_locus_tag=YPC_0547 NC_017265.1 Protein Homology CDS 534968 535555 . - 0 ID=cds479;Parent=gene509;Dbxref=Genbank:WP_002211640.1;Name=WP_002211640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211640.1;transl_table=11 NC_017265.1 RefSeq gene 535833 537323 . + . ID=gene510;Name=YPC_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02560;old_locus_tag=YPC_0548 NC_017265.1 Protein Homology CDS 535833 537323 . + 0 ID=cds480;Parent=gene510;Dbxref=Genbank:WP_002211641.1;Name=WP_002211641.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002211641.1;transl_table=11 NC_017265.1 RefSeq gene 537458 540577 . - . ID=gene511;Name=YPC_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02565;old_locus_tag=YPC_0549 NC_017265.1 Protein Homology CDS 537458 540577 . - 0 ID=cds481;Parent=gene511;Dbxref=Genbank:WP_002211642.1;Name=WP_002211642.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_002211642.1;transl_table=11 NC_017265.1 RefSeq gene 540590 541867 . - . ID=gene512;Name=YPC_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02570;old_locus_tag=YPC_0550 NC_017265.1 Protein Homology CDS 540590 541867 . - 0 ID=cds482;Parent=gene512;Dbxref=Genbank:WP_002211643.1;Name=WP_002211643.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002211643.1;transl_table=11 NC_017265.1 RefSeq gene 542306 542503 . + . ID=gene513;Name=YPC_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02575;old_locus_tag=YPC_0552 NC_017265.1 Protein Homology CDS 542306 542503 . + 0 ID=cds483;Parent=gene513;Dbxref=Genbank:WP_002214016.1;Name=WP_002214016.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214016.1;transl_table=11 NC_017265.1 RefSeq gene 542507 544873 . + . ID=gene514;Name=YPC_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02580;old_locus_tag=YPC_0553 NC_017265.1 Protein Homology CDS 542507 544873 . + 0 ID=cds484;Parent=gene514;Dbxref=Genbank:WP_002214014.1;Name=WP_002214014.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002214014.1;transl_table=11 NC_017265.1 RefSeq repeat_region 545036 546479 . + . ID=id65;gbkey=repeat_region NC_017265.1 RefSeq gene 545069 545854 . - . ID=gene515;Name=YPC_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02585;old_locus_tag=YPC_0554 NC_017265.1 Protein Homology CDS 545069 545854 . - 0 ID=cds485;Parent=gene515;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_017265.1 RefSeq gene 545908 546423 . - . ID=gene516;Name=YPC_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02590;old_locus_tag=YPC_0555 NC_017265.1 Protein Homology CDS 545908 546423 . - 0 ID=cds486;Parent=gene516;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_017265.1 RefSeq gene 546510 546779 . - . ID=gene517;Name=YPC_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02595;old_locus_tag=YPC_0556 NC_017265.1 Protein Homology CDS 546510 546779 . - 0 ID=cds487;Parent=gene517;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NC_017265.1 RefSeq gene 546901 547875 . - . ID=gene518;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YPC_RS02600;old_locus_tag=YPC_0557 NC_017265.1 Protein Homology CDS 546901 547875 . - 0 ID=cds488;Parent=gene518;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11 NC_017265.1 RefSeq gene 547875 548285 . - . ID=gene519;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YPC_RS02605;old_locus_tag=YPC_0558 NC_017265.1 Protein Homology CDS 547875 548285 . - 0 ID=cds489;Parent=gene519;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11 NC_017265.1 RefSeq gene 548351 551029 . - . ID=gene520;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YPC_RS02610;old_locus_tag=YPC_0559 NC_017265.1 Protein Homology CDS 548351 551029 . - 0 ID=cds490;Parent=gene520;Dbxref=Genbank:WP_002223151.1;Name=WP_002223151.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_002223151.1;transl_table=11 NC_017265.1 RefSeq gene 551054 552541 . - . ID=gene521;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YPC_RS02615;old_locus_tag=YPC_0560 NC_017265.1 Protein Homology CDS 551054 552541 . - 0 ID=cds491;Parent=gene521;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NC_017265.1 RefSeq gene 552563 553015 . - . ID=gene522;Name=YPC_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02620;old_locus_tag=YPC_0561 NC_017265.1 Protein Homology CDS 552563 553015 . - 0 ID=cds492;Parent=gene522;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11 NC_017265.1 RefSeq gene 553231 553307 . - . ID=gene523;Name=YPC_RS02625;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02625;old_locus_tag=YPC_0562 NC_017265.1 tRNAscan-SE tRNA 553231 553307 . - . ID=rna30;Parent=gene523;anticodon=(pos:complement(553271..553273));gbkey=tRNA;product=tRNA-Met NC_017265.1 tRNAscan-SE exon 553231 553307 . - . ID=id66;Parent=rna30;anticodon=(pos:complement(553271..553273));gbkey=tRNA;product=tRNA-Met NC_017265.1 RefSeq gene 553368 553454 . - . ID=gene524;Name=YPC_RS02630;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02630;old_locus_tag=YPC_0563 NC_017265.1 tRNAscan-SE tRNA 553368 553454 . - . ID=rna31;Parent=gene524;anticodon=(pos:complement(553418..553420));gbkey=tRNA;product=tRNA-Leu NC_017265.1 tRNAscan-SE exon 553368 553454 . - . ID=id67;Parent=rna31;anticodon=(pos:complement(553418..553420));gbkey=tRNA;product=tRNA-Leu NC_017265.1 RefSeq gene 553547 553882 . - . ID=gene525;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YPC_RS02635;old_locus_tag=YPC_0564 NC_017265.1 Protein Homology CDS 553547 553882 . - 0 ID=cds493;Parent=gene525;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NC_017265.1 RefSeq gene 554105 555445 . - . ID=gene526;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YPC_RS02640;old_locus_tag=YPC_0565 NC_017265.1 Protein Homology CDS 554105 555445 . - 0 ID=cds494;Parent=gene526;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NC_017265.1 RefSeq gene 555455 556288 . - . ID=gene527;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YPC_RS02645;old_locus_tag=YPC_0566 NC_017265.1 Protein Homology CDS 555455 556288 . - 0 ID=cds495;Parent=gene527;Dbxref=Genbank:WP_015683532.1;Name=WP_015683532.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_015683532.1;transl_table=11 NC_017265.1 RefSeq gene 556408 558342 . - . ID=gene528;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=YPC_RS02650;old_locus_tag=YPC_0567 NC_017265.1 Protein Homology CDS 556408 558342 . - 0 ID=cds496;Parent=gene528;Dbxref=Genbank:WP_002228195.1;Name=WP_002228195.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_002228195.1;transl_table=11 NC_017265.1 RefSeq gene 558399 559028 . - . ID=gene529;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=YPC_RS02655;old_locus_tag=YPC_0568 NC_017265.1 Protein Homology CDS 558399 559028 . - 0 ID=cds497;Parent=gene529;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11 NC_017265.1 RefSeq gene 559175 559468 . + . ID=gene530;Name=YPC_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02660;old_locus_tag=YPC_0569 NC_017265.1 Protein Homology CDS 559175 559468 . + 0 ID=cds498;Parent=gene530;Dbxref=Genbank:WP_002210185.1;Name=WP_002210185.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002210185.1;transl_table=11 NC_017265.1 RefSeq gene 559596 560072 . - . ID=gene531;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YPC_RS02665;old_locus_tag=YPC_0571 NC_017265.1 Protein Homology CDS 559596 560072 . - 0 ID=cds499;Parent=gene531;Dbxref=Genbank:WP_002210184.1;Name=WP_002210184.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NC_017265.1 RefSeq gene 560330 561778 . + . ID=gene532;Name=YPC_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02670;old_locus_tag=YPC_0572 NC_017265.1 Protein Homology CDS 560330 561778 . + 0 ID=cds500;Parent=gene532;Dbxref=Genbank:WP_015683533.1;Name=WP_015683533.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_015683533.1;transl_table=11 NC_017265.1 RefSeq gene 561784 562446 . + . ID=gene533;Name=YPC_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02675;old_locus_tag=YPC_0573 NC_017265.1 Protein Homology CDS 561784 562446 . + 0 ID=cds501;Parent=gene533;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11 NC_017265.1 RefSeq gene 562443 563510 . + . ID=gene534;Name=YPC_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02680;old_locus_tag=YPC_0574 NC_017265.1 Protein Homology CDS 562443 563510 . + 0 ID=cds502;Parent=gene534;Dbxref=Genbank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002210182.1;transl_table=11 NC_017265.1 RefSeq gene 563605 564777 . - . ID=gene535;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=YPC_RS02685;old_locus_tag=YPC_0575 NC_017265.1 Protein Homology CDS 563605 564777 . - 0 ID=cds503;Parent=gene535;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11 NC_017265.1 RefSeq gene 564778 565764 . - . ID=gene536;Name=YPC_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02690;old_locus_tag=YPC_0576 NC_017265.1 Protein Homology CDS 564778 565764 . - 0 ID=cds504;Parent=gene536;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11 NC_017265.1 RefSeq gene 565852 566109 . - . ID=gene537;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YPC_RS02695;old_locus_tag=YPC_0577 NC_017265.1 Protein Homology CDS 565852 566109 . - 0 ID=cds505;Parent=gene537;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NC_017265.1 RefSeq gene 566129 566440 . - . ID=gene538;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YPC_RS02700;old_locus_tag=YPC_0578 NC_017265.1 Protein Homology CDS 566129 566440 . - 0 ID=cds506;Parent=gene538;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NC_017265.1 RefSeq gene 566700 567671 . + . ID=gene539;Name=YPC_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02705;old_locus_tag=YPC_0579 NC_017265.1 Protein Homology CDS 566700 567671 . + 0 ID=cds507;Parent=gene539;Dbxref=Genbank:WP_002210177.1;Name=WP_002210177.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_002210177.1;transl_table=11 NC_017265.1 RefSeq gene 567768 568115 . - . ID=gene540;Name=YPC_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02710;old_locus_tag=YPC_0580 NC_017265.1 Protein Homology CDS 567768 568115 . - 0 ID=cds508;Parent=gene540;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NC_017265.1 RefSeq gene 568299 568574 . + . ID=gene541;Name=YPC_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02715;old_locus_tag=YPC_0581 NC_017265.1 Protein Homology CDS 568299 568574 . + 0 ID=cds509;Parent=gene541;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11 NC_017265.1 RefSeq gene 569008 569946 . - . ID=gene542;Name=YPC_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02720;old_locus_tag=YPC_0582 NC_017265.1 Protein Homology CDS 569008 569946 . - 0 ID=cds510;Parent=gene542;Dbxref=Genbank:WP_002210174.1;Name=WP_002210174.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NC_017265.1 RefSeq gene 570410 570880 . + . ID=gene543;Name=YPC_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02725;old_locus_tag=YPC_0583 NC_017265.1 Protein Homology CDS 570410 570880 . + 0 ID=cds511;Parent=gene543;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11 NC_017265.1 RefSeq gene 571269 571532 . + . ID=gene544;Name=YPC_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02730;old_locus_tag=YPC_0584 NC_017265.1 Protein Homology CDS 571269 571532 . + 0 ID=cds512;Parent=gene544;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11 NC_017265.1 RefSeq gene 571535 571741 . - . ID=gene545;Name=YPC_RS02735;gbkey=Gene;gene_biotype=other;locus_tag=YPC_RS02735;old_locus_tag=YPC_0585 NC_017265.1 RefSeq repeat_region 571557 571725 . + . ID=id68;gbkey=repeat_region NC_017265.1 RefSeq gene 571828 573210 . - . ID=gene546;Name=YPC_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02740;old_locus_tag=YPC_0586 NC_017265.1 Protein Homology CDS 571828 573210 . - 0 ID=cds513;Parent=gene546;Dbxref=Genbank:WP_002210171.1;Name=WP_002210171.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002210171.1;transl_table=11 NC_017265.1 RefSeq gene 573381 574394 . + . ID=gene547;Name=YPC_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02745;old_locus_tag=YPC_0587 NC_017265.1 Protein Homology CDS 573381 574394 . + 0 ID=cds514;Parent=gene547;Dbxref=Genbank:WP_002216946.1;Name=WP_002216946.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002216946.1;transl_table=11 NC_017265.1 RefSeq gene 574594 575121 . + . ID=gene548;Name=YPC_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02750;old_locus_tag=YPC_0588 NC_017265.1 Protein Homology CDS 574594 575121 . + 0 ID=cds515;Parent=gene548;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11 NC_017265.1 RefSeq gene 575239 575595 . - . ID=gene549;Name=YPC_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02755;old_locus_tag=YPC_0589 NC_017265.1 Protein Homology CDS 575239 575595 . - 0 ID=cds516;Parent=gene549;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11 NC_017265.1 RefSeq gene 575598 579514 . - . ID=gene550;Name=YPC_RS02760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS02760;pseudo=true NC_017265.1 Protein Homology CDS 575598 579514 . - 0 ID=cds517;Parent=gene550;exception=annotated by transcript or proteomic data;gbkey=CDS;product=translocation and assembly module TamB;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 579511 581247 . - . ID=gene551;Name=YPC_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02765;old_locus_tag=YPC_0592 NC_017265.1 Protein Homology CDS 579511 581247 . - 0 ID=cds518;Parent=gene551;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11 NC_017265.1 RefSeq gene 581522 582160 . + . ID=gene552;Name=YPC_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02770;old_locus_tag=YPC_0593 NC_017265.1 Protein Homology CDS 581522 582160 . + 0 ID=cds519;Parent=gene552;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NC_017265.1 RefSeq gene 582438 583769 . + . ID=gene553;Name=YPC_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02775;old_locus_tag=YPC_0594 NC_017265.1 Protein Homology CDS 582438 583769 . + 0 ID=cds520;Parent=gene553;Dbxref=Genbank:WP_015683534.1;Name=WP_015683534.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683534.1;transl_table=11 NC_017265.1 RefSeq gene 583877 584089 . - . ID=gene554;Name=YPC_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02780;old_locus_tag=YPC_0595 NC_017265.1 Protein Homology CDS 583877 584089 . - 0 ID=cds521;Parent=gene554;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11 NC_017265.1 RefSeq gene 584425 584988 . + . ID=gene555;Name=YPC_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02785;old_locus_tag=YPC_0596 NC_017265.1 Protein Homology CDS 584425 584988 . + 0 ID=cds522;Parent=gene555;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11 NC_017265.1 RefSeq gene 584991 585731 . - . ID=gene556;Name=YPC_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02790;old_locus_tag=YPC_0597 NC_017265.1 Protein Homology CDS 584991 585731 . - 0 ID=cds523;Parent=gene556;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11 NC_017265.1 RefSeq gene 586166 588136 . + . ID=gene557;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=YPC_RS02795;old_locus_tag=YPC_0598 NC_017265.1 Protein Homology CDS 586166 588136 . + 0 ID=cds524;Parent=gene557;Dbxref=Genbank:WP_002210160.1;Name=WP_002210160.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=3'-nucleotidase;protein_id=WP_002210160.1;transl_table=11 NC_017265.1 RefSeq gene 588291 588956 . + . ID=gene558;Name=YPC_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02800;old_locus_tag=YPC_0599 NC_017265.1 Protein Homology CDS 588291 588956 . + 0 ID=cds525;Parent=gene558;Dbxref=Genbank:WP_002210159.1;Name=WP_002210159.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_002210159.1;transl_table=11 NC_017265.1 RefSeq gene 589054 589674 . - . ID=gene559;Name=YPC_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02805;old_locus_tag=YPC_0600 NC_017265.1 Protein Homology CDS 589054 589674 . - 0 ID=cds526;Parent=gene559;Dbxref=Genbank:WP_002228198.1;Name=WP_002228198.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228198.1;transl_table=11 NC_017265.1 RefSeq gene 590017 590757 . + . ID=gene560;Name=YPC_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02810;old_locus_tag=YPC_0601 NC_017265.1 Protein Homology CDS 590017 590757 . + 0 ID=cds527;Parent=gene560;Dbxref=Genbank:WP_002210158.1;Name=WP_002210158.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_002210158.1;transl_table=11 NC_017265.1 RefSeq gene 590897 591352 . + . ID=gene561;Name=YPC_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02815;old_locus_tag=YPC_0602 NC_017265.1 Protein Homology CDS 590897 591352 . + 0 ID=cds528;Parent=gene561;Dbxref=Genbank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210157.1;transl_table=11 NC_017265.1 RefSeq repeat_region 591361 592078 . + . ID=id69;gbkey=repeat_region NC_017265.1 RefSeq gene 591474 591932 . - . ID=gene562;Name=YPC_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02820;old_locus_tag=YPC_0603 NC_017265.1 Protein Homology CDS 591474 591932 . - 0 ID=cds529;Parent=gene562;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 591922 592092 . - . ID=gene563;Name=YPC_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02825 NC_017265.1 Protein Homology CDS 591922 592092 . - 0 ID=cds530;Parent=gene563;Dbxref=Genbank:WP_025470773.1;Name=WP_025470773.1;gbkey=CDS;product=transposase;protein_id=WP_025470773.1;transl_table=11 NC_017265.1 RefSeq gene 592128 592580 . - . ID=gene564;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YPC_RS02830;old_locus_tag=YPC_0605 NC_017265.1 Protein Homology CDS 592128 592580 . - 0 ID=cds531;Parent=gene564;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NC_017265.1 RefSeq gene 592620 592847 . - . ID=gene565;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YPC_RS02835;old_locus_tag=YPC_0606 NC_017265.1 Protein Homology CDS 592620 592847 . - 0 ID=cds532;Parent=gene565;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NC_017265.1 RefSeq gene 592852 593169 . - . ID=gene566;Name=YPC_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02840;old_locus_tag=YPC_0607 NC_017265.1 Protein Homology CDS 592852 593169 . - 0 ID=cds533;Parent=gene566;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11 NC_017265.1 RefSeq gene 593178 593570 . - . ID=gene567;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YPC_RS02845;old_locus_tag=YPC_0608 NC_017265.1 Protein Homology CDS 593178 593570 . - 0 ID=cds534;Parent=gene567;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NC_017265.1 RefSeq gene 593584 593862 . - . ID=gene568;Name=YPC_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02850;old_locus_tag=YPC_0609 NC_017265.1 Protein Homology CDS 593584 593862 . - 0 ID=cds535;Parent=gene568;Dbxref=Genbank:WP_002228199.1;Name=WP_002228199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228199.1;transl_table=11 NC_017265.1 RefSeq gene 593937 594638 . - . ID=gene569;Name=YPC_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02855;old_locus_tag=YPC_0610 NC_017265.1 Protein Homology CDS 593937 594638 . - 0 ID=cds536;Parent=gene569;Dbxref=Genbank:WP_002210152.1;Name=WP_002210152.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_002210152.1;transl_table=11 NC_017265.1 RefSeq repeat_region 594607 596566 . + . ID=id70;gbkey=repeat_region NC_017265.1 RefSeq gene 594695 595717 . + . ID=gene570;Name=YPC_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02860;old_locus_tag=YPC_0611 NC_017265.1 Protein Homology CDS 594695 595717 . + 0 ID=cds537;Parent=gene570;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 595717 596496 . + . ID=gene571;Name=YPC_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02865;old_locus_tag=YPC_0612 NC_017265.1 Protein Homology CDS 595717 596496 . + 0 ID=cds538;Parent=gene571;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 596571 596645 . - . ID=gene572;Name=YPC_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02870 NC_017265.1 Protein Homology CDS 596571 596645 . - 0 ID=cds539;Parent=gene572;Dbxref=Genbank:WP_042468769.1;Name=WP_042468769.1;gbkey=CDS;product=phospholipase;protein_id=WP_042468769.1;transl_table=11 NC_017265.1 RefSeq gene 596836 597147 . + . ID=gene573;Name=YPC_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02875;old_locus_tag=YPC_0614 NC_017265.1 Protein Homology CDS 596836 597147 . + 0 ID=cds540;Parent=gene573;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11 NC_017265.1 RefSeq gene 597219 598850 . - . ID=gene574;Name=YPC_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02880;old_locus_tag=YPC_0615 NC_017265.1 Protein Homology CDS 597219 598850 . - 0 ID=cds541;Parent=gene574;Dbxref=Genbank:WP_002353634.1;Name=WP_002353634.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl CoA dehydrogenase;protein_id=WP_002353634.1;transl_table=11 NC_017265.1 RefSeq repeat_region 599020 599194 . + . ID=id71;gbkey=repeat_region NC_017265.1 RefSeq gene 599270 600010 . - . ID=gene575;Name=YPC_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02885;old_locus_tag=YPC_0617 NC_017265.1 Protein Homology CDS 599270 600010 . - 0 ID=cds542;Parent=gene575;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NC_017265.1 RefSeq gene 600129 602663 . - . ID=gene576;Name=YPC_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02890;old_locus_tag=YPC_0619 NC_017265.1 Protein Homology CDS 600129 602663 . - 0 ID=cds543;Parent=gene576;Dbxref=Genbank:WP_002209159.1;Name=WP_002209159.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_002209159.1;transl_table=11 NC_017265.1 RefSeq gene 602904 603329 . - . ID=gene577;Name=YPC_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02895;old_locus_tag=YPC_0620 NC_017265.1 Protein Homology CDS 602904 603329 . - 0 ID=cds544;Parent=gene577;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11 NC_017265.1 RefSeq gene 603698 604996 . - . ID=gene578;Name=YPC_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02900;old_locus_tag=YPC_0621 NC_017265.1 Protein Homology CDS 603698 604996 . - 0 ID=cds545;Parent=gene578;Dbxref=Genbank:WP_002209157.1;Name=WP_002209157.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_002209157.1;transl_table=11 NC_017265.1 RefSeq gene 605096 605296 . - . ID=gene579;Name=YPC_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02905;old_locus_tag=YPC_0622 NC_017265.1 Protein Homology CDS 605096 605296 . - 0 ID=cds546;Parent=gene579;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11 NC_017265.1 RefSeq gene 605468 606472 . - . ID=gene580;Name=YPC_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02910;old_locus_tag=YPC_0623 NC_017265.1 Protein Homology CDS 605468 606472 . - 0 ID=cds547;Parent=gene580;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11 NC_017265.1 RefSeq gene 606476 607735 . - . ID=gene581;Name=YPC_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02915;old_locus_tag=YPC_0624 NC_017265.1 Protein Homology CDS 606476 607735 . - 0 ID=cds548;Parent=gene581;Dbxref=Genbank:WP_002209154.1;Name=WP_002209154.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209154.1;transl_table=11 NC_017265.1 RefSeq gene 607976 609262 . - . ID=gene582;Name=YPC_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02920;old_locus_tag=YPC_0625 NC_017265.1 Protein Homology CDS 607976 609262 . - 0 ID=cds549;Parent=gene582;Dbxref=Genbank:WP_002209152.1;Name=WP_002209152.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_002209152.1;transl_table=11 NC_017265.1 RefSeq gene 609361 609666 . - . ID=gene583;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YPC_RS02925;old_locus_tag=YPC_0626 NC_017265.1 Protein Homology CDS 609361 609666 . - 0 ID=cds550;Parent=gene583;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NC_017265.1 RefSeq gene 609782 610723 . - . ID=gene584;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YPC_RS02930;old_locus_tag=YPC_0627 NC_017265.1 Protein Homology CDS 609782 610723 . - 0 ID=cds551;Parent=gene584;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11 NC_017265.1 RefSeq gene 610716 612629 . - . ID=gene585;Name=YPC_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02935;old_locus_tag=YPC_0628 NC_017265.1 Protein Homology CDS 610716 612629 . - 0 ID=cds552;Parent=gene585;Dbxref=Genbank:WP_015683535.1;Name=WP_015683535.1;gbkey=CDS;product=DNA mismatch repair protein;protein_id=WP_015683535.1;transl_table=11 NC_017265.1 RefSeq gene 612645 614558 . - . ID=gene586;Name=YPC_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02940;old_locus_tag=YPC_0629 NC_017265.1 Protein Homology CDS 612645 614558 . - 0 ID=cds553;Parent=gene586;Dbxref=Genbank:WP_002232017.1;Name=WP_002232017.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002232017.1;transl_table=11 NC_017265.1 RefSeq gene 614566 615036 . - . ID=gene587;Name=YPC_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02945;old_locus_tag=YPC_0630 NC_017265.1 Protein Homology CDS 614566 615036 . - 0 ID=cds554;Parent=gene587;Dbxref=Genbank:WP_002209146.1;Name=WP_002209146.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_002209146.1;transl_table=11 NC_017265.1 RefSeq gene 615047 616561 . - . ID=gene588;Name=YPC_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02950;old_locus_tag=YPC_0631 NC_017265.1 Protein Homology CDS 615047 616561 . - 0 ID=cds555;Parent=gene588;Dbxref=Genbank:WP_002209145.1;Name=WP_002209145.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002209145.1;transl_table=11 NC_017265.1 RefSeq gene 616560 617795 . + . ID=gene589;Name=YPC_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02955;old_locus_tag=YPC_0632 NC_017265.1 Protein Homology CDS 616560 617795 . + 0 ID=cds556;Parent=gene589;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11 NC_017265.1 RefSeq gene 618107 618182 . - . ID=gene590;Name=YPC_RS02960;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02960;old_locus_tag=YPC_0634 NC_017265.1 tRNAscan-SE tRNA 618107 618182 . - . ID=rna32;Parent=gene590;anticodon=(pos:complement(618147..618149));gbkey=tRNA;product=tRNA-Gly NC_017265.1 tRNAscan-SE exon 618107 618182 . - . ID=id72;Parent=rna32;anticodon=(pos:complement(618147..618149));gbkey=tRNA;product=tRNA-Gly NC_017265.1 RefSeq gene 618274 618349 . - . ID=gene591;Name=YPC_RS02965;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS02965;old_locus_tag=YPC_0635 NC_017265.1 tRNAscan-SE tRNA 618274 618349 . - . ID=rna33;Parent=gene591;anticodon=(pos:complement(618314..618316));gbkey=tRNA;product=tRNA-Gly NC_017265.1 tRNAscan-SE exon 618274 618349 . - . ID=id73;Parent=rna33;anticodon=(pos:complement(618314..618316));gbkey=tRNA;product=tRNA-Gly NC_017265.1 RefSeq repeat_region 618553 618895 . + . ID=id74;gbkey=repeat_region NC_017265.1 RefSeq gene 618907 619452 . - . ID=gene592;Name=YPC_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02975;old_locus_tag=YPC_0636 NC_017265.1 Protein Homology CDS 618907 619452 . - 0 ID=cds557;Parent=gene592;Dbxref=Genbank:WP_002209143.1;Name=WP_002209143.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_002209143.1;transl_table=11 NC_017265.1 RefSeq gene 619451 619645 . + . ID=gene593;Name=YPC_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02980 NC_017265.1 Protein Homology CDS 619451 619645 . + 0 ID=cds558;Parent=gene593;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11 NC_017265.1 RefSeq gene 619652 620704 . + . ID=gene594;Name=YPC_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02985;old_locus_tag=YPC_0637 NC_017265.1 Protein Homology CDS 619652 620704 . + 0 ID=cds559;Parent=gene594;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NC_017265.1 RefSeq gene 620906 621787 . + . ID=gene595;Name=YPC_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02990;old_locus_tag=YPC_0638 NC_017265.1 Protein Homology CDS 620906 621787 . + 0 ID=cds560;Parent=gene595;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11 NC_017265.1 RefSeq gene 621829 625170 . + . ID=gene596;Name=YPC_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS02995;old_locus_tag=YPC_0639 NC_017265.1 Protein Homology CDS 621829 625170 . + 0 ID=cds561;Parent=gene596;Dbxref=Genbank:WP_002209140.1;Name=WP_002209140.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_002209140.1;transl_table=11 NC_017265.1 RefSeq gene 625291 626268 . - . ID=gene597;Name=YPC_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03000;old_locus_tag=YPC_0640 NC_017265.1 Protein Homology CDS 625291 626268 . - 0 ID=cds562;Parent=gene597;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NC_017265.1 RefSeq gene 626428 626619 . - . ID=gene598;Name=YPC_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03005;old_locus_tag=YPC_0641 NC_017265.1 Protein Homology CDS 626428 626619 . - 0 ID=cds563;Parent=gene598;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11 NC_017265.1 RefSeq gene 626726 628549 . + . ID=gene599;Name=YPC_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03010;old_locus_tag=YPC_0642 NC_017265.1 Protein Homology CDS 626726 628549 . + 0 ID=cds564;Parent=gene599;Dbxref=Genbank:WP_002209137.1;Name=WP_002209137.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11 NC_017265.1 RefSeq gene 628542 629276 . + . ID=gene600;Name=YPC_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03015;old_locus_tag=YPC_0643 NC_017265.1 Protein Homology CDS 628542 629276 . + 0 ID=cds565;Parent=gene600;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NC_017265.1 RefSeq gene 629293 629685 . + . ID=gene601;Name=YPC_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03020;old_locus_tag=YPC_0644 NC_017265.1 Protein Homology CDS 629293 629685 . + 0 ID=cds566;Parent=gene601;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11 NC_017265.1 RefSeq gene 629702 630058 . + . ID=gene602;Name=YPC_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03025;old_locus_tag=YPC_0645 NC_017265.1 Protein Homology CDS 629702 630058 . + 0 ID=cds567;Parent=gene602;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11 NC_017265.1 RefSeq gene 630223 630537 . - . ID=gene603;Name=YPC_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03030;old_locus_tag=YPC_0646 NC_017265.1 Protein Homology CDS 630223 630537 . - 0 ID=cds568;Parent=gene603;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11 NC_017265.1 RefSeq gene 630784 631350 . - . ID=gene604;Name=YPC_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03035;old_locus_tag=YPC_0647 NC_017265.1 Protein Homology CDS 630784 631350 . - 0 ID=cds569;Parent=gene604;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NC_017265.1 RefSeq gene 631386 632414 . + . ID=gene605;Name=YPC_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03040;old_locus_tag=YPC_0648 NC_017265.1 Protein Homology CDS 631386 632414 . + 0 ID=cds570;Parent=gene605;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NC_017265.1 RefSeq gene 632699 633097 . - . ID=gene606;Name=YPC_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03045;old_locus_tag=YPC_0649 NC_017265.1 Protein Homology CDS 632699 633097 . - 0 ID=cds571;Parent=gene606;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11 NC_017265.1 RefSeq gene 633721 635367 . - . ID=gene607;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=YPC_RS03050;old_locus_tag=YPC_0650 NC_017265.1 Protein Homology CDS 633721 635367 . - 0 ID=cds572;Parent=gene607;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11 NC_017265.1 RefSeq gene 635414 635707 . - . ID=gene608;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=YPC_RS03055;old_locus_tag=YPC_0651 NC_017265.1 Protein Homology CDS 635414 635707 . - 0 ID=cds573;Parent=gene608;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NC_017265.1 RefSeq gene 635962 636540 . - . ID=gene609;Name=YPC_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03060;old_locus_tag=YPC_0652 NC_017265.1 Protein Homology CDS 635962 636540 . - 0 ID=cds574;Parent=gene609;Dbxref=Genbank:WP_002209126.1;Name=WP_002209126.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_002209126.1;transl_table=11 NC_017265.1 RefSeq gene 636988 638424 . + . ID=gene610;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YPC_RS03065;old_locus_tag=YPC_0654 NC_017265.1 Protein Homology CDS 636988 638424 . + 0 ID=cds575;Parent=gene610;Dbxref=Genbank:WP_015683536.1;Name=WP_015683536.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_015683536.1;transl_table=11 NC_017265.1 RefSeq gene 638544 639845 . + . ID=gene611;Name=YPC_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03070;old_locus_tag=YPC_0655 NC_017265.1 Protein Homology CDS 638544 639845 . + 0 ID=cds576;Parent=gene611;Dbxref=Genbank:WP_002209123.1;Name=WP_002209123.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002209123.1;transl_table=11 NC_017265.1 RefSeq gene 640066 640389 . + . ID=gene612;Name=YPC_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03075;old_locus_tag=YPC_0656 NC_017265.1 Protein Homology CDS 640066 640389 . + 0 ID=cds577;Parent=gene612;Dbxref=Genbank:WP_002353622.1;Name=WP_002353622.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent ion tolerance protein CutA;protein_id=WP_002353622.1;transl_table=11 NC_017265.1 RefSeq gene 640365 642152 . + . ID=gene613;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=YPC_RS03080;old_locus_tag=YPC_0657 NC_017265.1 Protein Homology CDS 640365 642152 . + 0 ID=cds578;Parent=gene613;Dbxref=Genbank:WP_002209121.1;Name=WP_002209121.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein DsbD;protein_id=WP_002209121.1;transl_table=11 NC_017265.1 RefSeq gene 642214 644361 . - . ID=gene614;Name=YPC_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03085;old_locus_tag=YPC_0658 NC_017265.1 Protein Homology CDS 642214 644361 . - 0 ID=cds579;Parent=gene614;Dbxref=Genbank:WP_002209120.1;Name=WP_002209120.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_002209120.1;transl_table=11 NC_017265.1 RefSeq gene 644384 644941 . - . ID=gene615;Name=YPC_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03090;old_locus_tag=YPC_0659 NC_017265.1 Protein Homology CDS 644384 644941 . - 0 ID=cds580;Parent=gene615;Dbxref=Genbank:WP_002209119.1;Name=WP_002209119.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209119.1;transl_table=11 NC_017265.1 RefSeq gene 644964 646979 . - . ID=gene616;Name=YPC_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03095;old_locus_tag=YPC_0660 NC_017265.1 Protein Homology CDS 644964 646979 . - 0 ID=cds581;Parent=gene616;Dbxref=Genbank:WP_002209118.1;Name=WP_002209118.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S-binding subunit;protein_id=WP_002209118.1;transl_table=11 NC_017265.1 RefSeq gene 647399 647974 . + . ID=gene617;Name=YPC_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03100;old_locus_tag=YPC_0661 NC_017265.1 Protein Homology CDS 647399 647974 . + 0 ID=cds582;Parent=gene617;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NC_017265.1 RefSeq repeat_region 648096 648199 . + . ID=id75;gbkey=repeat_region NC_017265.1 RefSeq gene 648119 648194 . + . ID=gene618;Name=YPC_RS03105;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS03105;old_locus_tag=YPC_0662 NC_017265.1 tRNAscan-SE tRNA 648119 648194 . + . ID=rna34;Parent=gene618;anticodon=(pos:648152..648154);gbkey=tRNA;product=tRNA-Phe NC_017265.1 tRNAscan-SE exon 648119 648194 . + . ID=id76;Parent=rna34;anticodon=(pos:648152..648154);gbkey=tRNA;product=tRNA-Phe NC_017265.1 RefSeq gene 648628 651183 . - . ID=gene619;Name=YPC_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03110;old_locus_tag=YPC_0663 NC_017265.1 Protein Homology CDS 648628 651183 . - 0 ID=cds583;Parent=gene619;Dbxref=Genbank:WP_002209115.1;Name=WP_002209115.1;gbkey=CDS;product=viral enhancin protein;protein_id=WP_002209115.1;transl_table=11 NC_017265.1 RefSeq gene 651213 651380 . - . ID=gene620;Name=YPC_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03115;old_locus_tag=YPC_0664 NC_017265.1 Protein Homology CDS 651213 651380 . - 0 ID=cds584;Parent=gene620;Dbxref=Genbank:WP_002209114.1;Name=WP_002209114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209114.1;transl_table=11 NC_017265.1 RefSeq gene 651610 652035 . + . ID=gene621;Name=YPC_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03120;old_locus_tag=YPC_0665 NC_017265.1 Protein Homology CDS 651610 652035 . + 0 ID=cds585;Parent=gene621;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11 NC_017265.1 RefSeq gene 652471 652737 . - . ID=gene622;Name=YPC_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03125;old_locus_tag=YPC_0667 NC_017265.1 Protein Homology CDS 652471 652737 . - 0 ID=cds586;Parent=gene622;Dbxref=Genbank:WP_002217947.1;Name=WP_002217947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217947.1;transl_table=11 NC_017265.1 RefSeq gene 652891 653925 . + . ID=gene623;Name=YPC_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03130;old_locus_tag=YPC_0668 NC_017265.1 Protein Homology CDS 652891 653925 . + 0 ID=cds587;Parent=gene623;Dbxref=Genbank:WP_015683537.1;Name=WP_015683537.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=sugar:proton symporter;protein_id=WP_015683537.1;transl_table=11 NC_017265.1 RefSeq gene 654074 654946 . - . ID=gene624;Name=YPC_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03135;old_locus_tag=YPC_0670 NC_017265.1 Protein Homology CDS 654074 654946 . - 0 ID=cds588;Parent=gene624;Dbxref=Genbank:WP_002209110.1;Name=WP_002209110.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_002209110.1;transl_table=11 NC_017265.1 RefSeq gene 655079 655900 . - . ID=gene625;Name=YPC_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03140;old_locus_tag=YPC_0672 NC_017265.1 Protein Homology CDS 655079 655900 . - 0 ID=cds589;Parent=gene625;Dbxref=Genbank:WP_002209108.1;Name=WP_002209108.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_002209108.1;transl_table=11 NC_017265.1 RefSeq gene 655982 656125 . - . ID=gene626;Name=YPC_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03145 NC_017265.1 Protein Homology CDS 655982 656125 . - 0 ID=cds590;Parent=gene626;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11 NC_017265.1 RefSeq gene 656122 656328 . - . ID=gene627;Name=YPC_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03150;old_locus_tag=YPC_0673 NC_017265.1 Protein Homology CDS 656122 656328 . - 0 ID=cds591;Parent=gene627;Dbxref=Genbank:WP_002209106.1;Name=WP_002209106.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_002209106.1;transl_table=11 NC_017265.1 RefSeq gene 656327 657784 . + . ID=gene628;Name=YPC_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03155;old_locus_tag=YPC_0674 NC_017265.1 Protein Homology CDS 656327 657784 . + 0 ID=cds592;Parent=gene628;Dbxref=Genbank:WP_002209105.1;Name=WP_002209105.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_002209105.1;transl_table=11 NC_017265.1 RefSeq gene 657781 659037 . + . ID=gene629;Name=YPC_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03160;old_locus_tag=YPC_0675 NC_017265.1 Protein Homology CDS 657781 659037 . + 0 ID=cds593;Parent=gene629;Dbxref=Genbank:WP_002209104.1;Name=WP_002209104.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_002209104.1;transl_table=11 NC_017265.1 RefSeq gene 659050 659874 . + . ID=gene630;Name=YPC_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03165;old_locus_tag=YPC_0676 NC_017265.1 Protein Homology CDS 659050 659874 . + 0 ID=cds594;Parent=gene630;Dbxref=Genbank:WP_002209103.1;Name=WP_002209103.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_002209103.1;transl_table=11 NC_017265.1 RefSeq gene 659941 661089 . + . ID=gene631;Name=YPC_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03170;old_locus_tag=YPC_0677 NC_017265.1 Protein Homology CDS 659941 661089 . + 0 ID=cds595;Parent=gene631;Dbxref=Genbank:WP_002209102.1;Name=WP_002209102.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002209102.1;transl_table=11 NC_017265.1 RefSeq gene 661103 661417 . + . ID=gene632;Name=YPC_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03175;old_locus_tag=YPC_0678 NC_017265.1 Protein Homology CDS 661103 661417 . + 0 ID=cds596;Parent=gene632;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NC_017265.1 RefSeq gene 661664 662212 . - . ID=gene633;Name=YPC_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03180;old_locus_tag=YPC_0679 NC_017265.1 Protein Homology CDS 661664 662212 . - 0 ID=cds597;Parent=gene633;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11 NC_017265.1 RefSeq gene 662670 665513 . + . ID=gene634;Name=YPC_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03185;old_locus_tag=YPC_0680 NC_017265.1 Protein Homology CDS 662670 665513 . + 0 ID=cds598;Parent=gene634;Dbxref=Genbank:WP_002209099.1;Name=WP_002209099.1;gbkey=CDS;product=UvrABC system protein A;protein_id=WP_002209099.1;transl_table=11 NC_017265.1 RefSeq gene 665606 665965 . - . ID=gene635;Name=YPC_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03190;old_locus_tag=YPC_0681 NC_017265.1 Protein Homology CDS 665606 665965 . - 0 ID=cds599;Parent=gene635;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11 NC_017265.1 RefSeq gene 666492 667685 . - . ID=gene636;Name=YPC_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03195;old_locus_tag=YPC_0682 NC_017265.1 Protein Homology CDS 666492 667685 . - 0 ID=cds600;Parent=gene636;Dbxref=Genbank:WP_002209097.1;Name=WP_002209097.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002209097.1;transl_table=11 NC_017265.1 RefSeq gene 667871 668950 . - . ID=gene637;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPC_RS03200;old_locus_tag=YPC_0683 NC_017265.1 Protein Homology CDS 667871 668950 . - 0 ID=cds601;Parent=gene637;Dbxref=Genbank:WP_002209096.1;Name=WP_002209096.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_002209096.1;transl_table=11 NC_017265.1 RefSeq gene 669047 670453 . - . ID=gene638;Name=YPC_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03205;old_locus_tag=YPC_0684 NC_017265.1 Protein Homology CDS 669047 670453 . - 0 ID=cds602;Parent=gene638;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NC_017265.1 RefSeq gene 670785 671768 . + . ID=gene639;Name=YPC_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03210;old_locus_tag=YPC_0685 NC_017265.1 Protein Homology CDS 670785 671768 . + 0 ID=cds603;Parent=gene639;Dbxref=Genbank:WP_002209094.1;Name=WP_002209094.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002209094.1;transl_table=11 NC_017265.1 RefSeq gene 672113 672331 . - . ID=gene640;Name=YPC_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03215;old_locus_tag=YPC_0687 NC_017265.1 Protein Homology CDS 672113 672331 . - 0 ID=cds604;Parent=gene640;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11 NC_017265.1 RefSeq gene 672847 673884 . - . ID=gene641;Name=YPC_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03220;old_locus_tag=YPC_0688 NC_017265.1 Protein Homology CDS 672847 673884 . - 0 ID=cds605;Parent=gene641;Dbxref=Genbank:WP_002209092.1;Name=WP_002209092.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_002209092.1;transl_table=11 NC_017265.1 RefSeq gene 674139 674648 . + . ID=gene642;Name=YPC_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03225;old_locus_tag=YPC_0689 NC_017265.1 Protein Homology CDS 674139 674648 . + 0 ID=cds606;Parent=gene642;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11 NC_017265.1 RefSeq gene 674815 675423 . - . ID=gene643;Name=YPC_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03230;old_locus_tag=YPC_0690 NC_017265.1 Protein Homology CDS 674815 675423 . - 0 ID=cds607;Parent=gene643;Dbxref=Genbank:WP_015683538.1;Name=WP_015683538.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_015683538.1;transl_table=11 NC_017265.1 RefSeq gene 675548 675919 . - . ID=gene644;Name=YPC_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03235;old_locus_tag=YPC_0691 NC_017265.1 Protein Homology CDS 675548 675919 . - 0 ID=cds608;Parent=gene644;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NC_017265.1 RefSeq gene 676047 678524 . + . ID=gene645;Name=YPC_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03240;old_locus_tag=YPC_0692 NC_017265.1 Protein Homology CDS 676047 678524 . + 0 ID=cds609;Parent=gene645;Dbxref=Genbank:WP_015683539.1;Name=WP_015683539.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_015683539.1;transl_table=11 NC_017265.1 RefSeq gene 678705 679571 . - . ID=gene646;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YPC_RS03245;old_locus_tag=YPC_0693 NC_017265.1 Protein Homology CDS 678705 679571 . - 0 ID=cds610;Parent=gene646;Dbxref=Genbank:WP_002209088.1;Name=WP_002209088.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_002209088.1;transl_table=11 NC_017265.1 RefSeq gene 679737 680261 . - . ID=gene647;Name=YPC_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03250;old_locus_tag=YPC_0694 NC_017265.1 Protein Homology CDS 679737 680261 . - 0 ID=cds611;Parent=gene647;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11 NC_017265.1 RefSeq gene 681092 684895 . + . ID=gene648;Name=YPC_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03255;old_locus_tag=YPC_0695 NC_017265.1 Protein Homology CDS 681092 684895 . + 0 ID=cds612;Parent=gene648;Dbxref=Genbank:WP_002223972.1;Name=WP_002223972.1;gbkey=CDS;product=autotransporter;protein_id=WP_002223972.1;transl_table=11 NC_017265.1 RefSeq repeat_region 682765 684903 . + . ID=id77;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 685042 685216 . + . ID=id78;gbkey=repeat_region NC_017265.1 RefSeq gene 685239 687296 . - . ID=gene649;Name=YPC_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03260;old_locus_tag=YPC_0697 NC_017265.1 Protein Homology CDS 685239 687296 . - 0 ID=cds613;Parent=gene649;Dbxref=Genbank:WP_002209085.1;Name=WP_002209085.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002209085.1;transl_table=11 NC_017265.1 RefSeq gene 687585 687788 . - . ID=gene650;Name=YPC_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03265;old_locus_tag=YPC_0698 NC_017265.1 Protein Homology CDS 687585 687788 . - 0 ID=cds614;Parent=gene650;Dbxref=Genbank:WP_002228683.1;Name=WP_002228683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228683.1;transl_table=11 NC_017265.1 RefSeq gene 688305 689624 . - . ID=gene651;Name=YPC_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03270;old_locus_tag=YPC_0699 NC_017265.1 Protein Homology CDS 688305 689624 . - 0 ID=cds615;Parent=gene651;Dbxref=Genbank:WP_002214633.1;Name=WP_002214633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214633.1;transl_table=11 NC_017265.1 RefSeq gene 690817 691071 . - . ID=gene652;Name=YPC_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03275;old_locus_tag=YPC_0701 NC_017265.1 Protein Homology CDS 690817 691071 . - 0 ID=cds616;Parent=gene652;Dbxref=Genbank:WP_002214631.1;Name=WP_002214631.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214631.1;transl_table=11 NC_017265.1 RefSeq gene 691082 691825 . - . ID=gene653;Name=YPC_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03280;old_locus_tag=YPC_0702 NC_017265.1 Protein Homology CDS 691082 691825 . - 0 ID=cds617;Parent=gene653;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11 NC_017265.1 RefSeq gene 691897 694275 . - . ID=gene654;Name=YPC_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03285;old_locus_tag=YPC_0703 NC_017265.1 Protein Homology CDS 691897 694275 . - 0 ID=cds618;Parent=gene654;Dbxref=Genbank:WP_002209081.1;Name=WP_002209081.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209081.1;transl_table=11 NC_017265.1 RefSeq gene 694526 695164 . - . ID=gene655;Name=YPC_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03290;old_locus_tag=YPC_0704 NC_017265.1 Protein Homology CDS 694526 695164 . - 0 ID=cds619;Parent=gene655;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11 NC_017265.1 RefSeq gene 695877 696452 . - . ID=gene656;Name=YPC_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03295;old_locus_tag=YPC_0705 NC_017265.1 Protein Homology CDS 695877 696452 . - 0 ID=cds620;Parent=gene656;Dbxref=Genbank:WP_002209079.1;Name=WP_002209079.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_002209079.1;transl_table=11 NC_017265.1 RefSeq gene 696636 697214 . - . ID=gene657;Name=YPC_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03300;old_locus_tag=YPC_0706 NC_017265.1 Protein Homology CDS 696636 697214 . - 0 ID=cds621;Parent=gene657;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11 NC_017265.1 RefSeq gene 697278 698315 . - . ID=gene658;Name=YPC_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03305;old_locus_tag=YPC_0707 NC_017265.1 Protein Homology CDS 697278 698315 . - 0 ID=cds622;Parent=gene658;Dbxref=Genbank:WP_002209077.1;Name=WP_002209077.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_002209077.1;transl_table=11 NC_017265.1 RefSeq gene 698337 698792 . - . ID=gene659;Name=YPC_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03310;old_locus_tag=YPC_0708 NC_017265.1 Protein Homology CDS 698337 698792 . - 0 ID=cds623;Parent=gene659;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11 NC_017265.1 RefSeq gene 698825 700009 . - . ID=gene660;Name=YPC_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03315;old_locus_tag=YPC_0709 NC_017265.1 Protein Homology CDS 698825 700009 . - 0 ID=cds624;Parent=gene660;Dbxref=Genbank:WP_002209075.1;Name=WP_002209075.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209075.1;transl_table=11 NC_017265.1 RefSeq gene 700009 700602 . - . ID=gene661;Name=YPC_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03320;old_locus_tag=YPC_0710 NC_017265.1 Protein Homology CDS 700009 700602 . - 0 ID=cds625;Parent=gene661;Dbxref=Genbank:WP_002228131.1;Name=WP_002228131.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_002228131.1;transl_table=11 NC_017265.1 RefSeq gene 700878 701939 . + . ID=gene662;Name=YPC_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03325;old_locus_tag=YPC_0711 NC_017265.1 Protein Homology CDS 700878 701939 . + 0 ID=cds626;Parent=gene662;Dbxref=Genbank:WP_002209073.1;Name=WP_002209073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209073.1;transl_table=11 NC_017265.1 RefSeq gene 701951 703087 . + . ID=gene663;Name=YPC_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03330;old_locus_tag=YPC_0712 NC_017265.1 Protein Homology CDS 701951 703087 . + 0 ID=cds627;Parent=gene663;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11 NC_017265.1 RefSeq gene 703080 703892 . + . ID=gene664;Name=YPC_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03335;old_locus_tag=YPC_0713 NC_017265.1 Protein Homology CDS 703080 703892 . + 0 ID=cds628;Parent=gene664;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11 NC_017265.1 RefSeq gene 703885 704964 . + . ID=gene665;Name=YPC_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03340;old_locus_tag=YPC_0714 NC_017265.1 Protein Homology CDS 703885 704964 . + 0 ID=cds629;Parent=gene665;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11 NC_017265.1 RefSeq gene 704964 705923 . + . ID=gene666;Name=YPC_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03345;old_locus_tag=YPC_0715 NC_017265.1 Protein Homology CDS 704964 705923 . + 0 ID=cds630;Parent=gene666;Dbxref=Genbank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209069.1;transl_table=11 NC_017265.1 RefSeq gene 706320 706808 . + . ID=gene667;Name=YPC_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03350;old_locus_tag=YPC_0716 NC_017265.1 Protein Homology CDS 706320 706808 . + 0 ID=cds631;Parent=gene667;Dbxref=Genbank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NC_017265.1 RefSeq gene 707123 707923 . + . ID=gene668;Name=YPC_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03355;old_locus_tag=YPC_0717 NC_017265.1 Protein Homology CDS 707123 707923 . + 0 ID=cds632;Parent=gene668;Dbxref=Genbank:WP_002209067.1;Name=WP_002209067.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NC_017265.1 RefSeq gene 708264 709577 . + . ID=gene669;Name=YPC_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03360;old_locus_tag=YPC_0718 NC_017265.1 Protein Homology CDS 708264 709577 . + 0 ID=cds633;Parent=gene669;Dbxref=Genbank:WP_002209066.1;Name=WP_002209066.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=heme utilization radical SAM enzyme HutW;protein_id=WP_002209066.1;transl_table=11 NC_017265.1 RefSeq gene 709610 710119 . + . ID=gene670;Name=YPC_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03365;old_locus_tag=YPC_0719 NC_017265.1 Protein Homology CDS 709610 710119 . + 0 ID=cds634;Parent=gene670;Dbxref=Genbank:WP_002209065.1;Name=WP_002209065.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_002209065.1;transl_table=11 NC_017265.1 RefSeq gene 710153 710803 . + . ID=gene671;Name=YPC_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03370;old_locus_tag=YPC_0720 NC_017265.1 Protein Homology CDS 710153 710803 . + 0 ID=cds635;Parent=gene671;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11 NC_017265.1 RefSeq gene 711218 713248 . + . ID=gene672;Name=YPC_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03375;old_locus_tag=YPC_0723 NC_017265.1 Protein Homology CDS 711218 713248 . + 0 ID=cds636;Parent=gene672;Dbxref=Genbank:WP_002209062.1;Name=WP_002209062.1;gbkey=CDS;product=hemin receptor;protein_id=WP_002209062.1;transl_table=11 NC_017265.1 RefSeq gene 713367 714404 . + . ID=gene673;Name=YPC_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03380;old_locus_tag=YPC_0724 NC_017265.1 Protein Homology CDS 713367 714404 . + 0 ID=cds637;Parent=gene673;Dbxref=Genbank:WP_002209061.1;Name=WP_002209061.1;gbkey=CDS;product=hemin transporter HmuS;protein_id=WP_002209061.1;transl_table=11 NC_017265.1 RefSeq gene 714401 715240 . + . ID=gene674;Name=YPC_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03385;old_locus_tag=YPC_0725 NC_017265.1 Protein Homology CDS 714401 715240 . + 0 ID=cds638;Parent=gene674;Dbxref=Genbank:WP_002209060.1;Name=WP_002209060.1;gbkey=CDS;product=hemin-binding periplasmic protein HmuT;protein_id=WP_002209060.1;transl_table=11 NC_017265.1 RefSeq gene 715237 716241 . + . ID=gene675;Name=YPC_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03390;old_locus_tag=YPC_0726 NC_017265.1 Protein Homology CDS 715237 716241 . + 0 ID=cds639;Parent=gene675;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NC_017265.1 RefSeq gene 716234 717034 . + . ID=gene676;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=YPC_RS03395;old_locus_tag=YPC_0727 NC_017265.1 Protein Homology CDS 716234 717034 . + 0 ID=cds640;Parent=gene676;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11 NC_017265.1 RefSeq gene 717175 718356 . - . ID=gene677;Name=YPC_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03400;old_locus_tag=YPC_0728 NC_017265.1 Protein Homology CDS 717175 718356 . - 0 ID=cds641;Parent=gene677;Dbxref=Genbank:WP_002215044.1;Name=WP_002215044.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002215044.1;transl_table=11 NC_017265.1 RefSeq gene 718402 719688 . - . ID=gene678;Name=YPC_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03405;old_locus_tag=YPC_0729 NC_017265.1 Protein Homology CDS 718402 719688 . - 0 ID=cds642;Parent=gene678;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11 NC_017265.1 RefSeq gene 719858 720841 . + . ID=gene679;Name=YPC_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03410;old_locus_tag=YPC_0730 NC_017265.1 Protein Homology CDS 719858 720841 . + 0 ID=cds643;Parent=gene679;Dbxref=Genbank:WP_002209056.1;Name=WP_002209056.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11 NC_017265.1 RefSeq gene 720919 721188 . - . ID=gene680;Name=YPC_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03415;old_locus_tag=YPC_0731 NC_017265.1 Protein Homology CDS 720919 721188 . - 0 ID=cds644;Parent=gene680;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11 NC_017265.1 RefSeq gene 721185 722399 . - . ID=gene681;Name=YPC_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03420;old_locus_tag=YPC_0732 NC_017265.1 Protein Homology CDS 721185 722399 . - 0 ID=cds645;Parent=gene681;Dbxref=Genbank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209054.1;transl_table=11 NC_017265.1 RefSeq repeat_region 722492 722663 . + . ID=id79;gbkey=repeat_region NC_017265.1 RefSeq gene 722782 723849 . - . ID=gene682;Name=YPC_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03425 NC_017265.1 Protein Homology CDS 722782 723849 . - 0 ID=cds646;Parent=gene682;Dbxref=Genbank:WP_002209053.1;Name=WP_002209053.1;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_002209053.1;transl_table=11 NC_017265.1 RefSeq gene 723839 724633 . - . ID=gene683;Name=YPC_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03430 NC_017265.1 Protein Homology CDS 723839 724633 . - 0 ID=cds647;Parent=gene683;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11 NC_017265.1 RefSeq gene 724635 724928 . - . ID=gene684;Name=YPC_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03435 NC_017265.1 Protein Homology CDS 724635 724928 . - 0 ID=cds648;Parent=gene684;Dbxref=Genbank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_002209051.1;transl_table=11 NC_017265.1 RefSeq gene 724925 725575 . - . ID=gene685;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPC_RS03440 NC_017265.1 Protein Homology CDS 724925 725575 . - 0 ID=cds649;Parent=gene685;Dbxref=Genbank:WP_002221023.1;Name=WP_002221023.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=flagellar biosynthesis protein FliP;protein_id=WP_002221023.1;transl_table=11 NC_017265.1 RefSeq gene 725702 726664 . - . ID=gene686;Name=YPC_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03445;old_locus_tag=YPC_0738 NC_017265.1 Protein Homology CDS 725702 726664 . - 0 ID=cds650;Parent=gene686;Dbxref=Genbank:WP_002209049.1;Name=WP_002209049.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_002209049.1;transl_table=11 NC_017265.1 RefSeq gene 726642 727040 . - . ID=gene687;Name=YPC_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03450;old_locus_tag=YPC_0739 NC_017265.1 Protein Homology CDS 726642 727040 . - 0 ID=cds651;Parent=gene687;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NC_017265.1 RefSeq gene 727021 727422 . - . ID=gene688;Name=YPC_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03455;old_locus_tag=YPC_0740 NC_017265.1 Protein Homology CDS 727021 727422 . - 0 ID=cds652;Parent=gene688;Dbxref=Genbank:WP_002209047.1;Name=WP_002209047.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209047.1;transl_table=11 NC_017265.1 RefSeq gene 727419 728756 . - . ID=gene689;Name=YPC_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03460;old_locus_tag=YPC_0741 NC_017265.1 Protein Homology CDS 727419 728756 . - 0 ID=cds653;Parent=gene689;Dbxref=Genbank:WP_002209046.1;Name=WP_002209046.1;gbkey=CDS;product=type III secretion system ATPase;protein_id=WP_002209046.1;transl_table=11 NC_017265.1 RefSeq gene 728743 730797 . - . ID=gene690;Name=YPC_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03465;old_locus_tag=YPC_0742 NC_017265.1 Protein Homology CDS 728743 730797 . - 0 ID=cds654;Parent=gene690;Dbxref=Genbank:WP_002356788.1;Name=WP_002356788.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_002356788.1;transl_table=11 NC_017265.1 RefSeq gene 730784 731431 . - . ID=gene691;Name=YPC_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03470;old_locus_tag=YPC_0743 NC_017265.1 Protein Homology CDS 730784 731431 . - 0 ID=cds655;Parent=gene691;Dbxref=Genbank:WP_002216333.1;Name=WP_002216333.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_002216333.1;transl_table=11 NC_017265.1 RefSeq gene 731428 732021 . - . ID=gene692;Name=YPC_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03475;old_locus_tag=YPC_0744 NC_017265.1 Protein Homology CDS 731428 732021 . - 0 ID=cds656;Parent=gene692;Dbxref=Genbank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209043.1;transl_table=11 NC_017265.1 RefSeq gene 732196 732927 . - . ID=gene693;Name=YPC_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03480;old_locus_tag=YPC_0745 NC_017265.1 Protein Homology CDS 732196 732927 . - 0 ID=cds657;Parent=gene693;Dbxref=Genbank:WP_002209042.1;Name=WP_002209042.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_002209042.1;transl_table=11 NC_017265.1 RefSeq gene 732924 733175 . - . ID=gene694;Name=YPC_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03485;old_locus_tag=YPC_0746 NC_017265.1 Protein Homology CDS 732924 733175 . - 0 ID=cds658;Parent=gene694;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11 NC_017265.1 RefSeq gene 733273 733521 . - . ID=gene695;Name=YPC_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03490 NC_017265.1 Protein Homology CDS 733273 733521 . - 0 ID=cds659;Parent=gene695;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11 NC_017265.1 RefSeq gene 733518 733733 . - . ID=gene696;Name=YPC_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03495 NC_017265.1 Protein Homology CDS 733518 733733 . - 0 ID=cds660;Parent=gene696;Dbxref=Genbank:WP_002228685.1;Name=WP_002228685.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002228685.1;transl_table=11 NC_017265.1 RefSeq gene 733743 734363 . - . ID=gene697;Name=YPC_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03500;old_locus_tag=YPC_0749 NC_017265.1 Protein Homology CDS 733743 734363 . - 0 ID=cds661;Parent=gene697;Dbxref=Genbank:WP_002216326.1;Name=WP_002216326.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002216326.1;transl_table=11 NC_017265.1 RefSeq gene 734537 734758 . - . ID=gene698;Name=YPC_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03505;old_locus_tag=YPC_0750 NC_017265.1 Protein Homology CDS 734537 734758 . - 0 ID=cds662;Parent=gene698;Dbxref=Genbank:WP_002209038.1;Name=WP_002209038.1;gbkey=CDS;product=type III secretion system protein%2C YseE family;protein_id=WP_002209038.1;transl_table=11 NC_017265.1 RefSeq gene 734777 735991 . - . ID=gene699;Name=YPC_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03510;old_locus_tag=YPC_0751 NC_017265.1 Protein Homology CDS 734777 735991 . - 0 ID=cds663;Parent=gene699;Dbxref=Genbank:WP_002209037.1;Name=WP_002209037.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_002209037.1;transl_table=11 NC_017265.1 RefSeq gene 735993 737492 . - . ID=gene700;Name=YPC_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03515;old_locus_tag=YPC_0752 NC_017265.1 Protein Homology CDS 735993 737492 . - 0 ID=cds664;Parent=gene700;Dbxref=Genbank:WP_002353603.1;Name=WP_002353603.1;gbkey=CDS;product=type II secretory pathway protein;protein_id=WP_002353603.1;transl_table=11 NC_017265.1 RefSeq gene 737736 740555 . + . ID=gene701;Name=YPC_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03520;old_locus_tag=YPC_0754 NC_017265.1 Protein Homology CDS 737736 740555 . + 0 ID=cds665;Parent=gene701;Dbxref=Genbank:WP_002209035.1;Name=WP_002209035.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_002209035.1;transl_table=11 NC_017265.1 RefSeq gene 740568 741200 . + . ID=gene702;Name=YPC_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03525;old_locus_tag=YPC_0755 NC_017265.1 Protein Homology CDS 740568 741200 . + 0 ID=cds666;Parent=gene702;Dbxref=Genbank:WP_002209034.1;Name=WP_002209034.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209034.1;transl_table=11 NC_017265.1 RefSeq gene 741378 742694 . - . ID=gene703;Name=YPC_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03530;old_locus_tag=YPC_0756 NC_017265.1 Protein Homology CDS 741378 742694 . - 0 ID=cds667;Parent=gene703;Dbxref=Genbank:WP_002209033.1;Name=WP_002209033.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_002209033.1;transl_table=11 NC_017265.1 RefSeq gene 743550 745508 . + . ID=gene704;Name=YPC_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03535;old_locus_tag=YPC_0757 NC_017265.1 Protein Homology CDS 743550 745508 . + 0 ID=cds668;Parent=gene704;Dbxref=Genbank:WP_015683540.1;Name=WP_015683540.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_015683540.1;transl_table=11 NC_017265.1 RefSeq gene 745565 745876 . + . ID=gene705;Name=YPC_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03540;old_locus_tag=YPC_0758 NC_017265.1 Protein Homology CDS 745565 745876 . + 0 ID=cds669;Parent=gene705;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11 NC_017265.1 RefSeq gene 745873 747528 . + . ID=gene706;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YPC_RS03545;old_locus_tag=YPC_0759 NC_017265.1 Protein Homology CDS 745873 747528 . + 0 ID=cds670;Parent=gene706;Dbxref=Genbank:WP_002209029.1;Name=WP_002209029.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_002209029.1;transl_table=11 NC_017265.1 RefSeq gene 747602 748588 . - . ID=gene707;Name=YPC_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03550;old_locus_tag=YPC_0760 NC_017265.1 Protein Homology CDS 747602 748588 . - 0 ID=cds671;Parent=gene707;Dbxref=Genbank:WP_002209028.1;Name=WP_002209028.1;gbkey=CDS;product=hydrolase;protein_id=WP_002209028.1;transl_table=11 NC_017265.1 RefSeq repeat_region 748560 750518 . + . ID=id80;gbkey=repeat_region NC_017265.1 RefSeq gene 748647 749669 . + . ID=gene708;Name=YPC_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03555;old_locus_tag=YPC_0761 NC_017265.1 Protein Homology CDS 748647 749669 . + 0 ID=cds672;Parent=gene708;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 749669 750448 . + . ID=gene709;Name=YPC_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03560;old_locus_tag=YPC_0762 NC_017265.1 Protein Homology CDS 749669 750448 . + 0 ID=cds673;Parent=gene709;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 750656 757118 . + . ID=gene710;Name=YPC_RS03565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS03565;old_locus_tag=YPC_0763;pseudo=true NC_017265.1 Protein Homology CDS 750656 757118 . + 0 ID=cds674;Parent=gene710;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide synthetase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 757126 757998 . + . ID=gene711;Name=YPC_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03570;old_locus_tag=YPC_0764 NC_017265.1 Protein Homology CDS 757126 757998 . + 0 ID=cds675;Parent=gene711;Dbxref=Genbank:WP_042468291.1;Name=WP_042468291.1;gbkey=CDS;product=AMP-binding protein;protein_id=WP_042468291.1;transl_table=11 NC_017265.1 RefSeq gene 757991 758374 . + . ID=gene712;Name=YPC_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03575 NC_017265.1 Protein Homology CDS 757991 758374 . + 0 ID=cds676;Parent=gene712;Dbxref=Genbank:WP_042468292.1;Name=WP_042468292.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468292.1;transl_table=11 NC_017265.1 RefSeq gene 758382 758813 . + . ID=gene713;Name=YPC_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03580;old_locus_tag=YPC_0766 NC_017265.1 Protein Homology CDS 758382 758813 . + 0 ID=cds677;Parent=gene713;Dbxref=Genbank:WP_042468293.1;Name=WP_042468293.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468293.1;transl_table=11 NC_017265.1 RefSeq gene 758826 764599 . + . ID=gene714;Name=YPC_RS03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS03585;pseudo=true NC_017265.1 Protein Homology CDS 758826 764599 . + 0 ID=cds678;Parent=gene714;exception=annotated by transcript or proteomic data;gbkey=CDS;product=siderophore biosynthesis protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 764571 765335 . + . ID=gene715;Name=YPC_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03590;old_locus_tag=YPC_0769 NC_017265.1 Protein Homology CDS 764571 765335 . + 0 ID=cds679;Parent=gene715;Dbxref=Genbank:WP_002231391.1;Name=WP_002231391.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231391.1;transl_table=11 NC_017265.1 RefSeq gene 765389 765658 . + . ID=gene716;Name=YPC_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03595;old_locus_tag=YPC_0770 NC_017265.1 Protein Homology CDS 765389 765658 . + 0 ID=cds680;Parent=gene716;Dbxref=Genbank:WP_002231392.1;Name=WP_002231392.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231392.1;transl_table=11 NC_017265.1 RefSeq gene 765655 766782 . + . ID=gene717;Name=YPC_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03600;old_locus_tag=YPC_0771 NC_017265.1 Protein Homology CDS 765655 766782 . + 0 ID=cds681;Parent=gene717;Dbxref=Genbank:WP_002211390.1;Name=WP_002211390.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_002211390.1;transl_table=11 NC_017265.1 RefSeq gene 766775 767539 . + . ID=gene718;Name=YPC_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03605;old_locus_tag=YPC_0772 NC_017265.1 Protein Homology CDS 766775 767539 . + 0 ID=cds682;Parent=gene718;Dbxref=Genbank:WP_002214925.1;Name=WP_002214925.1;gbkey=CDS;product=thioesterase;protein_id=WP_002214925.1;transl_table=11 NC_017265.1 RefSeq gene 767529 768833 . + . ID=gene719;Name=YPC_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03610;old_locus_tag=YPC_0773 NC_017265.1 Protein Homology CDS 767529 768833 . + 0 ID=cds683;Parent=gene719;Dbxref=Genbank:WP_002211392.1;Name=WP_002211392.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211392.1;transl_table=11 NC_017265.1 RefSeq gene 768833 770605 . + . ID=gene720;Name=YPC_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03615;old_locus_tag=YPC_0774 NC_017265.1 Protein Homology CDS 768833 770605 . + 0 ID=cds684;Parent=gene720;Dbxref=Genbank:WP_002214927.1;Name=WP_002214927.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_002214927.1;transl_table=11 NC_017265.1 RefSeq gene 770598 772355 . + . ID=gene721;Name=YPC_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03620;old_locus_tag=YPC_0775 NC_017265.1 Protein Homology CDS 770598 772355 . + 0 ID=cds685;Parent=gene721;Dbxref=Genbank:WP_002211394.1;Name=WP_002211394.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_002211394.1;transl_table=11 NC_017265.1 RefSeq gene 772678 773552 . - . ID=gene722;Name=YPC_RS03625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS03625;pseudo=true NC_017265.1 Protein Homology CDS 772678 773552 . - 0 ID=cds686;Parent=gene722;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ornithine carbamoyltransferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 773988 774386 . - . ID=gene723;Name=YPC_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03630;old_locus_tag=YPC_0778 NC_017265.1 Protein Homology CDS 773988 774386 . - 0 ID=cds687;Parent=gene723;Dbxref=Genbank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11 NC_017265.1 RefSeq gene 775926 777269 . + . ID=gene724;Name=YPC_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03635;old_locus_tag=YPC_0779 NC_017265.1 Protein Homology CDS 775926 777269 . + 0 ID=cds688;Parent=gene724;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11 NC_017265.1 RefSeq gene 778270 779928 . + . ID=gene725;Name=YPC_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03640;old_locus_tag=YPC_0780 NC_017265.1 Protein Homology CDS 778270 779928 . + 0 ID=cds689;Parent=gene725;Dbxref=Genbank:WP_002213742.1;Name=WP_002213742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213742.1;transl_table=11 NC_017265.1 RefSeq repeat_region 779922 782083 . + . ID=id81;gbkey=repeat_region NC_017265.1 RefSeq gene 780033 780440 . + . ID=gene726;Name=YPC_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03645 NC_017265.1 GeneMarkS+ CDS 780033 780440 . + 0 ID=cds690;Parent=gene726;Dbxref=Genbank:WP_042468295.1;Name=WP_042468295.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468295.1;transl_table=11 NC_017265.1 RefSeq gene 780430 781341 . + . ID=gene727;Name=YPC_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03650 NC_017265.1 Protein Homology CDS 780430 781341 . + 0 ID=cds691;Parent=gene727;Dbxref=Genbank:WP_042468297.1;Name=WP_042468297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468297.1;transl_table=11 NC_017265.1 RefSeq gene 781305 782033 . + . ID=gene728;Name=YPC_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03655 NC_017265.1 Protein Homology CDS 781305 782033 . + 0 ID=cds692;Parent=gene728;Dbxref=Genbank:WP_042468299.1;Name=WP_042468299.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468299.1;transl_table=11 NC_017265.1 RefSeq gene 782689 786459 . + . ID=gene729;Name=YPC_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03660;old_locus_tag=YPC_0784 NC_017265.1 Protein Homology CDS 782689 786459 . + 0 ID=cds693;Parent=gene729;Dbxref=Genbank:WP_015683546.1;Name=WP_015683546.1;gbkey=CDS;product=autotransporter;protein_id=WP_015683546.1;transl_table=11 NC_017265.1 RefSeq repeat_region 784348 786509 . + . ID=id82;gbkey=repeat_region NC_017265.1 RefSeq gene 787045 789270 . + . ID=gene730;Name=YPC_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03665;old_locus_tag=YPC_0785 NC_017265.1 Protein Homology CDS 787045 789270 . + 0 ID=cds694;Parent=gene730;Dbxref=Genbank:WP_002211400.1;Name=WP_002211400.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002211400.1;transl_table=11 NC_017265.1 RefSeq gene 789296 790615 . + . ID=gene731;Name=YPC_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03670;old_locus_tag=YPC_0786 NC_017265.1 Protein Homology CDS 789296 790615 . + 0 ID=cds695;Parent=gene731;Dbxref=Genbank:WP_002211401.1;Name=WP_002211401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211401.1;transl_table=11 NC_017265.1 RefSeq gene 790629 794681 . + . ID=gene732;Name=YPC_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03675;old_locus_tag=YPC_0787 NC_017265.1 Protein Homology CDS 790629 794681 . + 0 ID=cds696;Parent=gene732;Dbxref=Genbank:WP_002223678.1;Name=WP_002223678.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002223678.1;transl_table=11 NC_017265.1 RefSeq gene 794972 795214 . + . ID=gene733;Name=YPC_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03680;old_locus_tag=YPC_0789 NC_017265.1 Protein Homology CDS 794972 795214 . + 0 ID=cds697;Parent=gene733;Dbxref=Genbank:WP_002211403.1;Name=WP_002211403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211403.1;transl_table=11 NC_017265.1 RefSeq gene 795758 796171 . + . ID=gene734;Name=YPC_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03685;old_locus_tag=YPC_0790 NC_017265.1 Protein Homology CDS 795758 796171 . + 0 ID=cds698;Parent=gene734;Dbxref=Genbank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211404.1;transl_table=11 NC_017265.1 RefSeq gene 796351 797730 . - . ID=gene735;Name=YPC_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03690;old_locus_tag=YPC_0792 NC_017265.1 Protein Homology CDS 796351 797730 . - 0 ID=cds699;Parent=gene735;Dbxref=Genbank:WP_002223680.1;Name=WP_002223680.1;gbkey=CDS;product=transporter divalent anion:Na+ symporter (DASS) family;protein_id=WP_002223680.1;transl_table=11 NC_017265.1 RefSeq gene 798012 799031 . - . ID=gene736;Name=YPC_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03695;old_locus_tag=YPC_0793 NC_017265.1 Protein Homology CDS 798012 799031 . - 0 ID=cds700;Parent=gene736;Dbxref=Genbank:WP_002211406.1;Name=WP_002211406.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211406.1;transl_table=11 NC_017265.1 RefSeq gene 799325 800488 . + . ID=gene737;Name=YPC_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03700;old_locus_tag=YPC_0794 NC_017265.1 Protein Homology CDS 799325 800488 . + 0 ID=cds701;Parent=gene737;Dbxref=Genbank:WP_002211407.1;Name=WP_002211407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211407.1;transl_table=11 NC_017265.1 RefSeq repeat_region 800341 801787 . + . ID=id83;gbkey=repeat_region NC_017265.1 RefSeq gene 801217 801840 . - . ID=gene738;Name=YPC_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03705;old_locus_tag=YPC_0796 NC_017265.1 Protein Homology CDS 801217 801840 . - 0 ID=cds702;Parent=gene738;Dbxref=Genbank:WP_042468771.1;Name=WP_042468771.1;gbkey=CDS;product=transposase;protein_id=WP_042468771.1;transl_table=11 NC_017265.1 RefSeq gene 802004 803428 . + . ID=gene739;Name=YPC_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03710;old_locus_tag=YPC_0797 NC_017265.1 Protein Homology CDS 802004 803428 . + 0 ID=cds703;Parent=gene739;Dbxref=Genbank:WP_002211645.1;Name=WP_002211645.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_002211645.1;transl_table=11 NC_017265.1 RefSeq gene 803687 805867 . - . ID=gene740;Name=YPC_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03715;old_locus_tag=YPC_0798 NC_017265.1 Protein Homology CDS 803687 805867 . - 0 ID=cds704;Parent=gene740;Dbxref=Genbank:WP_002211646.1;Name=WP_002211646.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002211646.1;transl_table=11 NC_017265.1 RefSeq gene 805939 807267 . - . ID=gene741;Name=YPC_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03720;old_locus_tag=YPC_0799 NC_017265.1 Protein Homology CDS 805939 807267 . - 0 ID=cds705;Parent=gene741;Dbxref=Genbank:WP_002211647.1;Name=WP_002211647.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_002211647.1;transl_table=11 NC_017265.1 RefSeq gene 807264 809012 . - . ID=gene742;Name=YPC_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03725;old_locus_tag=YPC_0800 NC_017265.1 Protein Homology CDS 807264 809012 . - 0 ID=cds706;Parent=gene742;Dbxref=Genbank:WP_002211648.1;Name=WP_002211648.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_002211648.1;transl_table=11 NC_017265.1 RefSeq gene 809009 809959 . - . ID=gene743;Name=YPC_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03730;old_locus_tag=YPC_0801 NC_017265.1 Protein Homology CDS 809009 809959 . - 0 ID=cds707;Parent=gene743;Dbxref=Genbank:WP_002211649.1;Name=WP_002211649.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_002211649.1;transl_table=11 NC_017265.1 RefSeq gene 809943 811013 . - . ID=gene744;Name=YPC_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03735;old_locus_tag=YPC_0802 NC_017265.1 Protein Homology CDS 809943 811013 . - 0 ID=cds708;Parent=gene744;Dbxref=Genbank:WP_002228662.1;Name=WP_002228662.1;gbkey=CDS;product=aerobactin siderophore biosynthesis proteiniucA;protein_id=WP_002228662.1;transl_table=11 NC_017265.1 RefSeq gene 811106 811714 . - . ID=gene745;Name=YPC_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03740;old_locus_tag=YPC_0803 NC_017265.1 Protein Homology CDS 811106 811714 . - 0 ID=cds709;Parent=gene745;Dbxref=Genbank:WP_002214005.1;Name=WP_002214005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214005.1;transl_table=11 NC_017265.1 RefSeq gene 811854 813077 . + . ID=gene746;Name=YPC_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03745;old_locus_tag=YPC_0804 NC_017265.1 Protein Homology CDS 811854 813077 . + 0 ID=cds710;Parent=gene746;Dbxref=Genbank:WP_002211651.1;Name=WP_002211651.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211651.1;transl_table=11 NC_017265.1 RefSeq gene 813367 814200 . - . ID=gene747;Name=YPC_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03750;old_locus_tag=YPC_0807 NC_017265.1 Protein Homology CDS 813367 814200 . - 0 ID=cds711;Parent=gene747;Dbxref=Genbank:WP_002211652.1;Name=WP_002211652.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002211652.1;transl_table=11 NC_017265.1 RefSeq gene 814577 815953 . - . ID=gene748;Name=YPC_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03755;old_locus_tag=YPC_0809 NC_017265.1 Protein Homology CDS 814577 815953 . - 0 ID=cds712;Parent=gene748;Dbxref=Genbank:WP_002211654.1;Name=WP_002211654.1;gbkey=CDS;product=peptidase;protein_id=WP_002211654.1;transl_table=11 NC_017265.1 RefSeq gene 816515 817258 . + . ID=gene749;Name=YPC_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03760;old_locus_tag=YPC_0810 NC_017265.1 Protein Homology CDS 816515 817258 . + 0 ID=cds713;Parent=gene749;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NC_017265.1 RefSeq gene 817239 817889 . - . ID=gene750;Name=YPC_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03765;old_locus_tag=YPC_0811 NC_017265.1 Protein Homology CDS 817239 817889 . - 0 ID=cds714;Parent=gene750;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NC_017265.1 RefSeq gene 819059 819709 . + . ID=gene751;Name=YPC_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03770;old_locus_tag=YPC_0812 NC_017265.1 Protein Homology CDS 819059 819709 . + 0 ID=cds715;Parent=gene751;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11 NC_017265.1 RefSeq gene 820160 820555 . + . ID=gene752;Name=YPC_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03775;old_locus_tag=YPC_0814 NC_017265.1 Protein Homology CDS 820160 820555 . + 0 ID=cds716;Parent=gene752;Dbxref=Genbank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11 NC_017265.1 RefSeq gene 820623 820886 . + . ID=gene753;Name=YPC_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03780;old_locus_tag=YPC_0815 NC_017265.1 Protein Homology CDS 820623 820886 . + 0 ID=cds717;Parent=gene753;Dbxref=Genbank:WP_002215899.1;Name=WP_002215899.1;gbkey=CDS;product=transposase;protein_id=WP_002215899.1;transl_table=11 NC_017265.1 RefSeq gene 821060 821431 . + . ID=gene754;Name=YPC_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03785;old_locus_tag=YPC_0816 NC_017265.1 Protein Homology CDS 821060 821431 . + 0 ID=cds718;Parent=gene754;Dbxref=Genbank:WP_002215898.1;Name=WP_002215898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215898.1;transl_table=11 NC_017265.1 RefSeq gene 821474 821629 . + . ID=gene755;Name=YPC_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03790 NC_017265.1 Protein Homology CDS 821474 821629 . + 0 ID=cds719;Parent=gene755;Dbxref=Genbank:WP_002211661.1;Name=WP_002211661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211661.1;transl_table=11 NC_017265.1 RefSeq repeat_region 822404 829272 . + . ID=id84;gbkey=repeat_region NC_017265.1 RefSeq gene 822831 823331 . + . ID=gene756;Name=YPC_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03795;old_locus_tag=YPC_0818 NC_017265.1 Protein Homology CDS 822831 823331 . + 0 ID=cds720;Parent=gene756;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_017265.1 RefSeq gene 823374 824918 . + . ID=gene757;Name=YPC_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03800;old_locus_tag=YPC_0819 NC_017265.1 Protein Homology CDS 823374 824918 . + 0 ID=cds721;Parent=gene757;Dbxref=Genbank:WP_002215896.1;Name=WP_002215896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215896.1;transl_table=11 NC_017265.1 RefSeq gene 824930 826282 . + . ID=gene758;Name=YPC_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03805;old_locus_tag=YPC_0820 NC_017265.1 Protein Homology CDS 824930 826282 . + 0 ID=cds722;Parent=gene758;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11 NC_017265.1 RefSeq gene 826279 826965 . + . ID=gene759;Name=YPC_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03810;old_locus_tag=YPC_0821 NC_017265.1 Protein Homology CDS 826279 826965 . + 0 ID=cds723;Parent=gene759;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_017265.1 RefSeq gene 826965 828701 . + . ID=gene760;Name=YPC_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03815;old_locus_tag=YPC_0822 NC_017265.1 Protein Homology CDS 826965 828701 . + 0 ID=cds724;Parent=gene760;Dbxref=Genbank:WP_002228049.1;Name=WP_002228049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228049.1;transl_table=11 NC_017265.1 RefSeq gene 828705 829196 . + . ID=gene761;Name=YPC_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03820;old_locus_tag=YPC_0823 NC_017265.1 Protein Homology CDS 828705 829196 . + 0 ID=cds725;Parent=gene761;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_017265.1 RefSeq repeat_region 829595 831299 . + . ID=id85;gbkey=repeat_region NC_017265.1 RefSeq gene 829614 832262 . + . ID=gene762;Name=YPC_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03825;old_locus_tag=YPC_0824 NC_017265.1 Protein Homology CDS 829614 832262 . + 0 ID=cds726;Parent=gene762;Dbxref=Genbank:WP_002210013.1;Name=WP_002210013.1;gbkey=CDS;product=ATPase;protein_id=WP_002210013.1;transl_table=11 NC_017265.1 RefSeq gene 832259 834607 . + . ID=gene763;Name=YPC_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03830;old_locus_tag=YPC_0825 NC_017265.1 Protein Homology CDS 832259 834607 . + 0 ID=cds727;Parent=gene763;Dbxref=Genbank:WP_015683548.1;Name=WP_015683548.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_015683548.1;transl_table=11 NC_017265.1 RefSeq repeat_region 833966 834522 . + . ID=id86;gbkey=repeat_region NC_017265.1 RefSeq gene 834622 836844 . + . ID=gene764;Name=YPC_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03835;old_locus_tag=YPC_0826 NC_017265.1 Protein Homology CDS 834622 836844 . + 0 ID=cds728;Parent=gene764;Dbxref=Genbank:WP_002210011.1;Name=WP_002210011.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_002210011.1;transl_table=11 NC_017265.1 RefSeq gene 836988 837344 . + . ID=gene765;Name=YPC_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03840;old_locus_tag=YPC_0827 NC_017265.1 Protein Homology CDS 836988 837344 . + 0 ID=cds729;Parent=gene765;Dbxref=Genbank:WP_016257642.1;Name=WP_016257642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257642.1;transl_table=11 NC_017265.1 RefSeq gene 837548 837742 . + . ID=gene766;Name=YPC_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03845 NC_017265.1 Protein Homology CDS 837548 837742 . + 0 ID=cds730;Parent=gene766;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NC_017265.1 RefSeq repeat_region 837710 838343 . + . ID=id87;gbkey=repeat_region NC_017265.1 RefSeq gene 837771 838046 . + . ID=gene767;Name=YPC_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03850;old_locus_tag=YPC_0828 NC_017265.1 Protein Homology CDS 837771 838046 . + 0 ID=cds731;Parent=gene767;Dbxref=Genbank:WP_002216108.1;Name=WP_002216108.1;gbkey=CDS;product=transposase;protein_id=WP_002216108.1;transl_table=11 NC_017265.1 RefSeq gene 838100 838435 . + . ID=gene768;Name=YPC_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03855;old_locus_tag=YPC_0829 NC_017265.1 Protein Homology CDS 838100 838435 . + 0 ID=cds732;Parent=gene768;Dbxref=Genbank:WP_002216107.1;Name=WP_002216107.1;gbkey=CDS;product=transposase;protein_id=WP_002216107.1;transl_table=11 NC_017265.1 RefSeq repeat_region 838357 841084 . + . ID=id88;gbkey=repeat_region NC_017265.1 RefSeq gene 838967 839602 . + . ID=gene769;Name=YPC_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03860;old_locus_tag=YPC_0830 NC_017265.1 Protein Homology CDS 838967 839602 . + 0 ID=cds733;Parent=gene769;Dbxref=Genbank:WP_002210010.1;Name=WP_002210010.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210010.1;transl_table=11 NC_017265.1 RefSeq gene 839618 841915 . + . ID=gene770;Name=YPC_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03865;old_locus_tag=YPC_0831 NC_017265.1 Protein Homology CDS 839618 841915 . + 0 ID=cds734;Parent=gene770;Dbxref=Genbank:WP_002210009.1;Name=WP_002210009.1;gbkey=CDS;product=kinase;protein_id=WP_002210009.1;transl_table=11 NC_017265.1 RefSeq gene 841902 842669 . + . ID=gene771;Name=YPC_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03870;old_locus_tag=YPC_0832 NC_017265.1 Protein Homology CDS 841902 842669 . + 0 ID=cds735;Parent=gene771;Dbxref=Genbank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11 NC_017265.1 RefSeq repeat_region 842704 843338 . + . ID=id89;gbkey=repeat_region NC_017265.1 RefSeq gene 842918 843040 . + . ID=gene772;Name=YPC_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03875 NC_017265.1 Protein Homology CDS 842918 843040 . + 0 ID=cds736;Parent=gene772;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NC_017265.1 RefSeq gene 843094 843462 . + . ID=gene773;Name=YPC_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03880;old_locus_tag=YPC_0834 NC_017265.1 Protein Homology CDS 843094 843462 . + 0 ID=cds737;Parent=gene773;Dbxref=Genbank:WP_002263919.1;Name=WP_002263919.1;gbkey=CDS;product=transposase;protein_id=WP_002263919.1;transl_table=11 NC_017265.1 RefSeq repeat_region 843460 844669 . + . ID=id90;gbkey=repeat_region NC_017265.1 RefSeq gene 844070 844705 . + . ID=gene774;Name=YPC_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03885;old_locus_tag=YPC_0835 NC_017265.1 Protein Homology CDS 844070 844705 . + 0 ID=cds738;Parent=gene774;Dbxref=Genbank:WP_002210005.1;Name=WP_002210005.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210005.1;transl_table=11 NC_017265.1 RefSeq gene 844729 845037 . + . ID=gene775;Name=YPC_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03890;old_locus_tag=YPC_0836 NC_017265.1 Protein Homology CDS 844729 845037 . + 0 ID=cds739;Parent=gene775;Dbxref=Genbank:WP_002228972.1;Name=WP_002228972.1;gbkey=CDS;product=integrase;protein_id=WP_002228972.1;transl_table=11 NC_017265.1 RefSeq repeat_region 845285 845388 . + . ID=id91;gbkey=repeat_region NC_017265.1 RefSeq gene 845290 845365 . - . ID=gene776;Name=YPC_RS03895;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS03895;old_locus_tag=YPC_0837 NC_017265.1 tRNAscan-SE tRNA 845290 845365 . - . ID=rna35;Parent=gene776;anticodon=(pos:complement(845330..845332));gbkey=tRNA;product=tRNA-Phe NC_017265.1 tRNAscan-SE exon 845290 845365 . - . ID=id92;Parent=rna35;anticodon=(pos:complement(845330..845332));gbkey=tRNA;product=tRNA-Phe NC_017265.1 RefSeq gene 846034 848196 . + . ID=gene777;Name=YPC_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03900;old_locus_tag=YPC_0839 NC_017265.1 Protein Homology CDS 846034 848196 . + 0 ID=cds740;Parent=gene777;Dbxref=Genbank:WP_002210002.1;Name=WP_002210002.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_002210002.1;transl_table=11 NC_017265.1 RefSeq gene 848752 849711 . + . ID=gene778;Name=YPC_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03905;old_locus_tag=YPC_0840 NC_017265.1 Protein Homology CDS 848752 849711 . + 0 ID=cds741;Parent=gene778;Dbxref=Genbank:WP_002210001.1;Name=WP_002210001.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210001.1;transl_table=11 NC_017265.1 RefSeq gene 849757 851256 . + . ID=gene779;Name=YPC_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03910;old_locus_tag=YPC_0841 NC_017265.1 Protein Homology CDS 849757 851256 . + 0 ID=cds742;Parent=gene779;Dbxref=Genbank:WP_002210000.1;Name=WP_002210000.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_002210000.1;transl_table=11 NC_017265.1 RefSeq gene 851337 852272 . + . ID=gene780;Name=YPC_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03915;old_locus_tag=YPC_0842 NC_017265.1 Protein Homology CDS 851337 852272 . + 0 ID=cds743;Parent=gene780;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11 NC_017265.1 RefSeq gene 852355 854388 . - . ID=gene781;Name=YPC_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03920;old_locus_tag=YPC_0843 NC_017265.1 Protein Homology CDS 852355 854388 . - 0 ID=cds744;Parent=gene781;Dbxref=Genbank:WP_002209998.1;Name=WP_002209998.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209998.1;transl_table=11 NC_017265.1 RefSeq gene 854492 855592 . - . ID=gene782;Name=YPC_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03925;old_locus_tag=YPC_0844 NC_017265.1 Protein Homology CDS 854492 855592 . - 0 ID=cds745;Parent=gene782;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NC_017265.1 RefSeq gene 855892 856968 . - . ID=gene783;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YPC_RS03930;old_locus_tag=YPC_0845 NC_017265.1 Protein Homology CDS 855892 856968 . - 0 ID=cds746;Parent=gene783;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11 NC_017265.1 RefSeq gene 857151 857423 . - . ID=gene784;Name=YPC_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03935;old_locus_tag=YPC_0846 NC_017265.1 Protein Homology CDS 857151 857423 . - 0 ID=cds747;Parent=gene784;Dbxref=Genbank:WP_002209994.1;Name=WP_002209994.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002209994.1;transl_table=11 NC_017265.1 RefSeq gene 857601 858716 . - . ID=gene785;Name=YPC_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03940;old_locus_tag=YPC_0847 NC_017265.1 Protein Homology CDS 857601 858716 . - 0 ID=cds748;Parent=gene785;Dbxref=Genbank:WP_002228057.1;Name=WP_002228057.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_002228057.1;transl_table=11 NC_017265.1 RefSeq gene 859054 859773 . + . ID=gene786;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=YPC_RS03945;old_locus_tag=YPC_0848 NC_017265.1 Protein Homology CDS 859054 859773 . + 0 ID=cds749;Parent=gene786;Dbxref=Genbank:WP_002209991.1;Name=WP_002209991.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_002209991.1;transl_table=11 NC_017265.1 RefSeq gene 859773 860099 . + . ID=gene787;Name=YPC_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03950;old_locus_tag=YPC_0849 NC_017265.1 Protein Homology CDS 859773 860099 . + 0 ID=cds750;Parent=gene787;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11 NC_017265.1 RefSeq gene 860210 861136 . + . ID=gene788;Name=YPC_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03955;old_locus_tag=YPC_0850 NC_017265.1 Protein Homology CDS 860210 861136 . + 0 ID=cds751;Parent=gene788;Dbxref=Genbank:WP_002209989.1;Name=WP_002209989.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002209989.1;transl_table=11 NC_017265.1 RefSeq gene 861248 861778 . + . ID=gene789;Name=YPC_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03960 NC_017265.1 Protein Homology CDS 861248 861778 . + 0 ID=cds752;Parent=gene789;Dbxref=Genbank:WP_002228656.1;Name=WP_002228656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228656.1;transl_table=11 NC_017265.1 RefSeq gene 861751 861981 . + . ID=gene790;Name=YPC_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03965 NC_017265.1 Protein Homology CDS 861751 861981 . + 0 ID=cds753;Parent=gene790;Dbxref=Genbank:WP_002228655.1;Name=WP_002228655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228655.1;transl_table=11 NC_017265.1 RefSeq gene 862477 871809 . + . ID=gene791;Name=YPC_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03970;old_locus_tag=YPC_0853 NC_017265.1 Protein Homology CDS 862477 871809 . + 0 ID=cds754;Parent=gene791;Dbxref=Genbank:WP_015683549.1;Name=WP_015683549.1;gbkey=CDS;product=virulence determinant;protein_id=WP_015683549.1;transl_table=11 NC_017265.1 RefSeq gene 871999 873129 . - . ID=gene792;Name=YPC_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03975;old_locus_tag=YPC_0854 NC_017265.1 Protein Homology CDS 871999 873129 . - 0 ID=cds755;Parent=gene792;Dbxref=Genbank:WP_002209987.1;Name=WP_002209987.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002209987.1;transl_table=11 NC_017265.1 RefSeq gene 873122 873715 . - . ID=gene793;Name=YPC_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03980;old_locus_tag=YPC_0855 NC_017265.1 Protein Homology CDS 873122 873715 . - 0 ID=cds756;Parent=gene793;Dbxref=Genbank:WP_002215614.1;Name=WP_002215614.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_002215614.1;transl_table=11 NC_017265.1 RefSeq gene 873815 874105 . - . ID=gene794;Name=YPC_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03985;old_locus_tag=YPC_0856 NC_017265.1 Protein Homology CDS 873815 874105 . - 0 ID=cds757;Parent=gene794;Dbxref=Genbank:WP_002215612.1;Name=WP_002215612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215612.1;transl_table=11 NC_017265.1 RefSeq gene 874102 874656 . - . ID=gene795;Name=YPC_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03990;old_locus_tag=YPC_0857 NC_017265.1 Protein Homology CDS 874102 874656 . - 0 ID=cds758;Parent=gene795;Dbxref=Genbank:WP_002209984.1;Name=WP_002209984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209984.1;transl_table=11 NC_017265.1 RefSeq gene 874944 875765 . - . ID=gene796;Name=YPC_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS03995;old_locus_tag=YPC_0858 NC_017265.1 Protein Homology CDS 874944 875765 . - 0 ID=cds759;Parent=gene796;Dbxref=Genbank:WP_002209983.1;Name=WP_002209983.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_002209983.1;transl_table=11 NC_017265.1 RefSeq gene 875898 876596 . - . ID=gene797;Name=YPC_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04000;old_locus_tag=YPC_0859 NC_017265.1 Protein Homology CDS 875898 876596 . - 0 ID=cds760;Parent=gene797;Dbxref=Genbank:WP_002215609.1;Name=WP_002215609.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_002215609.1;transl_table=11 NC_017265.1 RefSeq gene 876616 877740 . + . ID=gene798;Name=YPC_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04005;old_locus_tag=YPC_0860 NC_017265.1 Protein Homology CDS 876616 877740 . + 0 ID=cds761;Parent=gene798;Dbxref=Genbank:WP_002209981.1;Name=WP_002209981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209981.1;transl_table=11 NC_017265.1 RefSeq gene 877849 878964 . - . ID=gene799;Name=YPC_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04010;old_locus_tag=YPC_0861 NC_017265.1 Protein Homology CDS 877849 878964 . - 0 ID=cds762;Parent=gene799;Dbxref=Genbank:WP_002209980.1;Name=WP_002209980.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11 NC_017265.1 RefSeq gene 878968 879852 . - . ID=gene800;Name=YPC_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04015;old_locus_tag=YPC_0862 NC_017265.1 Protein Homology CDS 878968 879852 . - 0 ID=cds763;Parent=gene800;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NC_017265.1 RefSeq gene 880032 880454 . - . ID=gene801;Name=YPC_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04020;old_locus_tag=YPC_0863 NC_017265.1 Protein Homology CDS 880032 880454 . - 0 ID=cds764;Parent=gene801;Dbxref=Genbank:WP_002209978.1;Name=WP_002209978.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_002209978.1;transl_table=11 NC_017265.1 RefSeq gene 880454 881017 . - . ID=gene802;Name=YPC_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04025;old_locus_tag=YPC_0864 NC_017265.1 Protein Homology CDS 880454 881017 . - 0 ID=cds765;Parent=gene802;Dbxref=Genbank:WP_002209977.1;Name=WP_002209977.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209977.1;transl_table=11 NC_017265.1 RefSeq gene 881133 882092 . - . ID=gene803;Name=YPC_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04030;old_locus_tag=YPC_0865 NC_017265.1 Protein Homology CDS 881133 882092 . - 0 ID=cds766;Parent=gene803;Dbxref=Genbank:WP_002209976.1;Name=WP_002209976.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_002209976.1;transl_table=11 NC_017265.1 RefSeq gene 882118 882849 . - . ID=gene804;Name=YPC_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04035;old_locus_tag=YPC_0866 NC_017265.1 Protein Homology CDS 882118 882849 . - 0 ID=cds767;Parent=gene804;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11 NC_017265.1 RefSeq gene 883110 883817 . - . ID=gene805;Name=YPC_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04040;old_locus_tag=YPC_0869 NC_017265.1 Protein Homology CDS 883110 883817 . - 0 ID=cds768;Parent=gene805;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11 NC_017265.1 RefSeq gene 883915 884427 . - . ID=gene806;Name=YPC_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04045;old_locus_tag=YPC_0870 NC_017265.1 Protein Homology CDS 883915 884427 . - 0 ID=cds769;Parent=gene806;Dbxref=Genbank:WP_002228653.1;Name=WP_002228653.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_002228653.1;transl_table=11 NC_017265.1 RefSeq gene 884620 885774 . - . ID=gene807;Name=YPC_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04050;old_locus_tag=YPC_0871 NC_017265.1 Protein Homology CDS 884620 885774 . - 0 ID=cds770;Parent=gene807;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11 NC_017265.1 RefSeq gene 886981 888960 . + . ID=gene808;Name=YPC_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04055;old_locus_tag=YPC_0873 NC_017265.1 Protein Homology CDS 886981 888960 . + 0 ID=cds771;Parent=gene808;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NC_017265.1 RefSeq gene 889120 889440 . + . ID=gene809;Name=YPC_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04060;old_locus_tag=YPC_0874 NC_017265.1 Protein Homology CDS 889120 889440 . + 0 ID=cds772;Parent=gene809;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11 NC_017265.1 RefSeq repeat_region 889513 889683 . + . ID=id93;gbkey=repeat_region NC_017265.1 RefSeq gene 889730 890482 . - . ID=gene810;Name=YPC_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04065;old_locus_tag=YPC_0876 NC_017265.1 Protein Homology CDS 889730 890482 . - 0 ID=cds773;Parent=gene810;Dbxref=Genbank:WP_002209967.1;Name=WP_002209967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209967.1;transl_table=11 NC_017265.1 RefSeq gene 890973 892967 . + . ID=gene811;Name=YPC_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04070;old_locus_tag=YPC_0877 NC_017265.1 Protein Homology CDS 890973 892967 . + 0 ID=cds774;Parent=gene811;Dbxref=Genbank:WP_002209965.1;Name=WP_002209965.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_002209965.1;transl_table=11 NC_017265.1 RefSeq repeat_region 893123 893844 . + . ID=id94;gbkey=repeat_region NC_017265.1 RefSeq gene 893275 893733 . + . ID=gene812;Name=YPC_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04075;old_locus_tag=YPC_0879 NC_017265.1 Protein Homology CDS 893275 893733 . + 0 ID=cds775;Parent=gene812;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 894074 895090 . + . ID=gene813;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YPC_RS04080;old_locus_tag=YPC_0880 NC_017265.1 Protein Homology CDS 894074 895090 . + 0 ID=cds776;Parent=gene813;Dbxref=Genbank:WP_002209964.1;Name=WP_002209964.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NC_017265.1 RefSeq gene 895193 896356 . + . ID=gene814;Name=YPC_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04085;old_locus_tag=YPC_0881 NC_017265.1 Protein Homology CDS 895193 896356 . + 0 ID=cds777;Parent=gene814;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NC_017265.1 RefSeq gene 896476 897555 . + . ID=gene815;Name=YPC_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04090;old_locus_tag=YPC_0882 NC_017265.1 Protein Homology CDS 896476 897555 . + 0 ID=cds778;Parent=gene815;Dbxref=Genbank:WP_002209962.1;Name=WP_002209962.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NC_017265.1 RefSeq gene 897587 897877 . - . ID=gene816;Name=YPC_RS04095;gbkey=Gene;gene_biotype=other;locus_tag=YPC_RS04095;old_locus_tag=YPC_0883 NC_017265.1 RefSeq repeat_region 897597 897767 . + . ID=id95;gbkey=repeat_region NC_017265.1 RefSeq gene 897993 898862 . + . ID=gene817;Name=YPC_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04100;old_locus_tag=YPC_0884 NC_017265.1 Protein Homology CDS 897993 898862 . + 0 ID=cds779;Parent=gene817;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11 NC_017265.1 RefSeq gene 899125 899742 . + . ID=gene818;Name=YPC_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04105;old_locus_tag=YPC_0885 NC_017265.1 Protein Homology CDS 899125 899742 . + 0 ID=cds780;Parent=gene818;Dbxref=Genbank:WP_002209960.1;Name=WP_002209960.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein ArgO;protein_id=WP_002209960.1;transl_table=11 NC_017265.1 RefSeq gene 899932 900711 . + . ID=gene819;Name=YPC_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04110;old_locus_tag=YPC_0886 NC_017265.1 Protein Homology CDS 899932 900711 . + 0 ID=cds781;Parent=gene819;Dbxref=Genbank:WP_002209959.1;Name=WP_002209959.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209959.1;transl_table=11 NC_017265.1 RefSeq gene 900722 901630 . - . ID=gene820;Name=YPC_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04115;old_locus_tag=YPC_0887 NC_017265.1 Protein Homology CDS 900722 901630 . - 0 ID=cds782;Parent=gene820;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11 NC_017265.1 RefSeq gene 901972 902628 . + . ID=gene821;Name=YPC_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04120;old_locus_tag=YPC_0888 NC_017265.1 Protein Homology CDS 901972 902628 . + 0 ID=cds783;Parent=gene821;Dbxref=Genbank:WP_002209957.1;Name=WP_002209957.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A 1;protein_id=WP_002209957.1;transl_table=11 NC_017265.1 RefSeq gene 902935 904176 . + . ID=gene822;Name=YPC_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04125;old_locus_tag=YPC_0889 NC_017265.1 Protein Homology CDS 902935 904176 . + 0 ID=cds784;Parent=gene822;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NC_017265.1 RefSeq repeat_region 904218 904390 . + . ID=id96;gbkey=repeat_region NC_017265.1 RefSeq gene 904441 905037 . - . ID=gene823;Name=YPC_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04130;old_locus_tag=YPC_0891 NC_017265.1 Protein Homology CDS 904441 905037 . - 0 ID=cds785;Parent=gene823;Dbxref=Genbank:WP_002209955.1;Name=WP_002209955.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002209955.1;transl_table=11 NC_017265.1 RefSeq gene 905401 905730 . - . ID=gene824;Name=YPC_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04135;old_locus_tag=YPC_0893 NC_017265.1 Protein Homology CDS 905401 905730 . - 0 ID=cds786;Parent=gene824;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NC_017265.1 RefSeq gene 906067 906645 . + . ID=gene825;Name=YPC_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04140;old_locus_tag=YPC_0894 NC_017265.1 Protein Homology CDS 906067 906645 . + 0 ID=cds787;Parent=gene825;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11 NC_017265.1 RefSeq gene 906733 908046 . + . ID=gene826;Name=YPC_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04145;old_locus_tag=YPC_0895 NC_017265.1 Protein Homology CDS 906733 908046 . + 0 ID=cds788;Parent=gene826;Dbxref=Genbank:WP_002209952.1;Name=WP_002209952.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_002209952.1;transl_table=11 NC_017265.1 RefSeq gene 908115 909293 . + . ID=gene827;Name=YPC_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04150;old_locus_tag=YPC_0896 NC_017265.1 Protein Homology CDS 908115 909293 . + 0 ID=cds789;Parent=gene827;Dbxref=Genbank:WP_002209951.1;Name=WP_002209951.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209951.1;transl_table=11 NC_017265.1 RefSeq gene 909466 910686 . + . ID=gene828;Name=YPC_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04155;old_locus_tag=YPC_0897 NC_017265.1 Protein Homology CDS 909466 910686 . + 0 ID=cds790;Parent=gene828;Dbxref=Genbank:WP_002209950.1;Name=WP_002209950.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209950.1;transl_table=11 NC_017265.1 RefSeq gene 911405 912502 . + . ID=gene829;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YPC_RS04160;old_locus_tag=YPC_0898 NC_017265.1 Protein Homology CDS 911405 912502 . + 0 ID=cds791;Parent=gene829;Dbxref=Genbank:WP_002209949.1;Name=WP_002209949.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_002209949.1;transl_table=11 NC_017265.1 RefSeq gene 912571 912957 . + . ID=gene830;Name=YPC_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04165;old_locus_tag=YPC_0899 NC_017265.1 Protein Homology CDS 912571 912957 . + 0 ID=cds792;Parent=gene830;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11 NC_017265.1 RefSeq gene 913169 916048 . + . ID=gene831;Name=YPC_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04170;old_locus_tag=YPC_0900 NC_017265.1 Protein Homology CDS 913169 916048 . + 0 ID=cds793;Parent=gene831;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11 NC_017265.1 RefSeq repeat_region 916082 916255 . + . ID=id97;gbkey=repeat_region NC_017265.1 RefSeq gene 916426 916863 . + . ID=gene832;Name=YPC_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04175;old_locus_tag=YPC_0902 NC_017265.1 Protein Homology CDS 916426 916863 . + 0 ID=cds794;Parent=gene832;Dbxref=Genbank:WP_002209946.1;Name=WP_002209946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209946.1;transl_table=11 NC_017265.1 RefSeq gene 917924 918076 . + . ID=gene833;Name=YPC_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04180;old_locus_tag=YPC_0904 NC_017265.1 Protein Homology CDS 917924 918076 . + 0 ID=cds795;Parent=gene833;Dbxref=Genbank:WP_002209944.1;Name=WP_002209944.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002209944.1;transl_table=11 NC_017265.1 RefSeq gene 918073 920049 . + . ID=gene834;Name=YPC_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04185;old_locus_tag=YPC_0905 NC_017265.1 Protein Homology CDS 918073 920049 . + 0 ID=cds796;Parent=gene834;Dbxref=Genbank:WP_002215142.1;Name=WP_002215142.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215142.1;transl_table=11 NC_017265.1 RefSeq gene 920153 921256 . + . ID=gene835;Name=YPC_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04190;old_locus_tag=YPC_0906 NC_017265.1 Protein Homology CDS 920153 921256 . + 0 ID=cds797;Parent=gene835;Dbxref=Genbank:WP_002209943.1;Name=WP_002209943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209943.1;transl_table=11 NC_017265.1 RefSeq gene 921458 922159 . + . ID=gene836;Name=YPC_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04195;old_locus_tag=YPC_0907 NC_017265.1 Protein Homology CDS 921458 922159 . + 0 ID=cds798;Parent=gene836;Dbxref=Genbank:WP_002209942.1;Name=WP_002209942.1;gbkey=CDS;product=hemolysin III;protein_id=WP_002209942.1;transl_table=11 NC_017265.1 RefSeq gene 922417 922914 . + . ID=gene837;Name=YPC_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04200;old_locus_tag=YPC_0908 NC_017265.1 Protein Homology CDS 922417 922914 . + 0 ID=cds799;Parent=gene837;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11 NC_017265.1 RefSeq gene 922987 923979 . - . ID=gene838;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YPC_RS04205;old_locus_tag=YPC_0909 NC_017265.1 Protein Homology CDS 922987 923979 . - 0 ID=cds800;Parent=gene838;Dbxref=Genbank:WP_002209940.1;Name=WP_002209940.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_002209940.1;transl_table=11 NC_017265.1 RefSeq gene 924296 924562 . + . ID=gene839;Name=YPC_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04210;old_locus_tag=YPC_0910 NC_017265.1 Protein Homology CDS 924296 924562 . + 0 ID=cds801;Parent=gene839;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11 NC_017265.1 RefSeq gene 924543 924968 . + . ID=gene840;Name=YPC_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04215;old_locus_tag=YPC_0911 NC_017265.1 Protein Homology CDS 924543 924968 . + 0 ID=cds802;Parent=gene840;Dbxref=Genbank:WP_002215144.1;Name=WP_002215144.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215144.1;transl_table=11 NC_017265.1 RefSeq gene 924968 925666 . + . ID=gene841;Name=YPC_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04220;old_locus_tag=YPC_0912 NC_017265.1 Protein Homology CDS 924968 925666 . + 0 ID=cds803;Parent=gene841;Dbxref=Genbank:WP_002209937.1;Name=WP_002209937.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209937.1;transl_table=11 NC_017265.1 RefSeq gene 925691 927109 . + . ID=gene842;Name=YPC_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04225;old_locus_tag=YPC_0913 NC_017265.1 Protein Homology CDS 925691 927109 . + 0 ID=cds804;Parent=gene842;Dbxref=Genbank:WP_002209936.1;Name=WP_002209936.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002209936.1;transl_table=11 NC_017265.1 RefSeq gene 927230 928687 . + . ID=gene843;Name=YPC_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04230;old_locus_tag=YPC_0914 NC_017265.1 Protein Homology CDS 927230 928687 . + 0 ID=cds805;Parent=gene843;Dbxref=Genbank:WP_002220113.1;Name=WP_002220113.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220113.1;transl_table=11 NC_017265.1 RefSeq gene 928777 929295 . - . ID=gene844;Name=YPC_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04235;old_locus_tag=YPC_0915 NC_017265.1 Protein Homology CDS 928777 929295 . - 0 ID=cds806;Parent=gene844;Dbxref=Genbank:WP_002209934.1;Name=WP_002209934.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_002209934.1;transl_table=11 NC_017265.1 RefSeq gene 929402 930301 . + . ID=gene845;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YPC_RS04240;old_locus_tag=YPC_0916 NC_017265.1 Protein Homology CDS 929402 930301 . + 0 ID=cds807;Parent=gene845;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NC_017265.1 RefSeq gene 930332 931048 . + . ID=gene846;Name=YPC_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04245;old_locus_tag=YPC_0917 NC_017265.1 Protein Homology CDS 930332 931048 . + 0 ID=cds808;Parent=gene846;Dbxref=Genbank:WP_002209932.1;Name=WP_002209932.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_002209932.1;transl_table=11 NC_017265.1 RefSeq gene 931055 932788 . + . ID=gene847;Name=YPC_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04250;old_locus_tag=YPC_0918 NC_017265.1 Protein Homology CDS 931055 932788 . + 0 ID=cds809;Parent=gene847;Dbxref=Genbank:WP_002209931.1;Name=WP_002209931.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NC_017265.1 RefSeq gene 933133 934065 . + . ID=gene848;Name=YPC_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04255 NC_017265.1 Protein Homology CDS 933133 934065 . + 0 ID=cds810;Parent=gene848;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11 NC_017265.1 RefSeq gene 934075 935592 . + . ID=gene849;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YPC_RS04260;old_locus_tag=YPC_0920 NC_017265.1 Protein Homology CDS 934075 935592 . + 0 ID=cds811;Parent=gene849;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NC_017265.1 RefSeq gene 935786 935859 . + . ID=gene850;Name=YPC_RS04265;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS04265;old_locus_tag=YPC_0921 NC_017265.1 tRNAscan-SE tRNA 935786 935859 . + . ID=rna36;Parent=gene850;anticodon=(pos:935818..935820);gbkey=tRNA;product=tRNA-Gly NC_017265.1 tRNAscan-SE exon 935786 935859 . + . ID=id98;Parent=rna36;anticodon=(pos:935818..935820);gbkey=tRNA;product=tRNA-Gly NC_017265.1 RefSeq gene 936025 937239 . + . ID=gene851;Name=YPC_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04270;old_locus_tag=YPC_0922 NC_017265.1 Protein Homology CDS 936025 937239 . + 0 ID=cds812;Parent=gene851;Dbxref=Genbank:WP_002209929.1;Name=WP_002209929.1;gbkey=CDS;product=integrase;protein_id=WP_002209929.1;transl_table=11 NC_017265.1 RefSeq gene 937321 937506 . - . ID=gene852;Name=YPC_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04275 NC_017265.1 Protein Homology CDS 937321 937506 . - 0 ID=cds813;Parent=gene852;Dbxref=Genbank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11 NC_017265.1 RefSeq gene 937607 937732 . - . ID=gene853;Name=YPC_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04280;old_locus_tag=YPC_0924 NC_017265.1 Protein Homology CDS 937607 937732 . - 0 ID=cds814;Parent=gene853;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11 NC_017265.1 RefSeq repeat_region 937890 938145 . + . ID=id99;gbkey=repeat_region NC_017265.1 RefSeq gene 938104 938364 . + . ID=gene854;Name=YPC_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04285;old_locus_tag=YPC_0925 NC_017265.1 Protein Homology CDS 938104 938364 . + 0 ID=cds815;Parent=gene854;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11 NC_017265.1 RefSeq gene 938427 938789 . + . ID=gene855;Name=YPC_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04290;old_locus_tag=YPC_0926 NC_017265.1 Protein Homology CDS 938427 938789 . + 0 ID=cds816;Parent=gene855;Dbxref=Genbank:WP_002209925.1;Name=WP_002209925.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209925.1;transl_table=11 NC_017265.1 RefSeq gene 938953 939249 . + . ID=gene856;Name=YPC_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04295;old_locus_tag=YPC_0927 NC_017265.1 Protein Homology CDS 938953 939249 . + 0 ID=cds817;Parent=gene856;Dbxref=Genbank:WP_002214787.1;Name=WP_002214787.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214787.1;transl_table=11 NC_017265.1 RefSeq gene 939249 939647 . + . ID=gene857;Name=YPC_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04300;old_locus_tag=YPC_0928 NC_017265.1 Protein Homology CDS 939249 939647 . + 0 ID=cds818;Parent=gene857;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11 NC_017265.1 RefSeq gene 940048 942339 . - . ID=gene858;Name=YPC_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04305;old_locus_tag=YPC_0929 NC_017265.1 Protein Homology CDS 940048 942339 . - 0 ID=cds819;Parent=gene858;Dbxref=Genbank:WP_002209923.1;Name=WP_002209923.1;gbkey=CDS;product=DNA primase;protein_id=WP_002209923.1;transl_table=11 NC_017265.1 RefSeq gene 942639 942965 . + . ID=gene859;Name=YPC_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04310 NC_017265.1 Protein Homology CDS 942639 942965 . + 0 ID=cds820;Parent=gene859;Dbxref=Genbank:WP_002209922.1;Name=WP_002209922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209922.1;transl_table=11 NC_017265.1 RefSeq gene 942958 943110 . + . ID=gene860;Name=YPC_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04315 NC_017265.1 Protein Homology CDS 942958 943110 . + 0 ID=cds821;Parent=gene860;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NC_017265.1 RefSeq gene 943124 943324 . - . ID=gene861;Name=YPC_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04320;old_locus_tag=YPC_0932 NC_017265.1 Protein Homology CDS 943124 943324 . - 0 ID=cds822;Parent=gene861;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11 NC_017265.1 RefSeq gene 943506 943838 . - . ID=gene862;Name=YPC_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04325;old_locus_tag=YPC_0933 NC_017265.1 Protein Homology CDS 943506 943838 . - 0 ID=cds823;Parent=gene862;Dbxref=Genbank:WP_002214791.1;Name=WP_002214791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214791.1;transl_table=11 NC_017265.1 RefSeq gene 943844 944080 . - . ID=gene863;Name=YPC_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04330;old_locus_tag=YPC_0934 NC_017265.1 Protein Homology CDS 943844 944080 . - 0 ID=cds824;Parent=gene863;Dbxref=Genbank:WP_002214792.1;Name=WP_002214792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214792.1;transl_table=11 NC_017265.1 RefSeq gene 944093 944458 . - . ID=gene864;Name=YPC_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04335;old_locus_tag=YPC_0935 NC_017265.1 Protein Homology CDS 944093 944458 . - 0 ID=cds825;Parent=gene864;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NC_017265.1 RefSeq gene 944727 945869 . + . ID=gene865;Name=YPC_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04340;old_locus_tag=YPC_0937 NC_017265.1 Protein Homology CDS 944727 945869 . + 0 ID=cds826;Parent=gene865;Dbxref=Genbank:WP_002209918.1;Name=WP_002209918.1;gbkey=CDS;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11 NC_017265.1 RefSeq gene 946376 947914 . + . ID=gene866;Name=YPC_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04345;old_locus_tag=YPC_0938 NC_017265.1 Protein Homology CDS 946376 947914 . + 0 ID=cds827;Parent=gene866;Dbxref=Genbank:WP_002214794.1;Name=WP_002214794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214794.1;transl_table=11 NC_017265.1 RefSeq gene 947911 948105 . + . ID=gene867;Name=YPC_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04350 NC_017265.1 Protein Homology CDS 947911 948105 . + 0 ID=cds828;Parent=gene867;Dbxref=Genbank:WP_002214795.1;Name=WP_002214795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214795.1;transl_table=11 NC_017265.1 RefSeq gene 948478 948681 . + . ID=gene868;Name=YPC_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04355 NC_017265.1 Protein Homology CDS 948478 948681 . + 0 ID=cds829;Parent=gene868;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NC_017265.1 RefSeq gene 948728 949012 . + . ID=gene869;Name=YPC_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04360;old_locus_tag=YPC_0942 NC_017265.1 Protein Homology CDS 948728 949012 . + 0 ID=cds830;Parent=gene869;Dbxref=Genbank:WP_002214798.1;Name=WP_002214798.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_002214798.1;transl_table=11 NC_017265.1 RefSeq repeat_region 948822 949185 . + . ID=id100;gbkey=repeat_region NC_017265.1 RefSeq gene 949422 951581 . + . ID=gene870;Name=YPC_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04365;old_locus_tag=YPC_0943 NC_017265.1 Protein Homology CDS 949422 951581 . + 0 ID=cds831;Parent=gene870;Dbxref=Genbank:WP_002209914.1;Name=WP_002209914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209914.1;transl_table=11 NC_017265.1 RefSeq gene 951551 952318 . + . ID=gene871;Name=YPC_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04370;old_locus_tag=YPC_0944 NC_017265.1 Protein Homology CDS 951551 952318 . + 0 ID=cds832;Parent=gene871;Dbxref=Genbank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209913.1;transl_table=11 NC_017265.1 RefSeq gene 952630 952842 . + . ID=gene872;Name=YPC_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04375 NC_017265.1 Protein Homology CDS 952630 952842 . + 0 ID=cds833;Parent=gene872;Dbxref=Genbank:WP_002214799.1;Name=WP_002214799.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214799.1;transl_table=11 NC_017265.1 RefSeq gene 952923 953702 . + . ID=gene873;Name=YPC_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04380;old_locus_tag=YPC_0945 NC_017265.1 Protein Homology CDS 952923 953702 . + 0 ID=cds834;Parent=gene873;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11 NC_017265.1 RefSeq gene 953958 954224 . + . ID=gene874;Name=YPC_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04385;old_locus_tag=YPC_0946 NC_017265.1 Protein Homology CDS 953958 954224 . + 0 ID=cds835;Parent=gene874;Dbxref=Genbank:WP_002209911.1;Name=WP_002209911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209911.1;transl_table=11 NC_017265.1 RefSeq gene 954307 954627 . - . ID=gene875;Name=YPC_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04390;old_locus_tag=YPC_0947 NC_017265.1 Protein Homology CDS 954307 954627 . - 0 ID=cds836;Parent=gene875;Dbxref=Genbank:WP_002209910.1;Name=WP_002209910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209910.1;transl_table=11 NC_017265.1 RefSeq gene 954627 955307 . - . ID=gene876;Name=YPC_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04395;old_locus_tag=YPC_0948 NC_017265.1 Protein Homology CDS 954627 955307 . - 0 ID=cds837;Parent=gene876;Dbxref=Genbank:WP_002209909.1;Name=WP_002209909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_002209909.1;transl_table=11 NC_017265.1 RefSeq gene 955731 956588 . - . ID=gene877;Name=YPC_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04400;old_locus_tag=YPC_0951 NC_017265.1 Protein Homology CDS 955731 956588 . - 0 ID=cds838;Parent=gene877;Dbxref=Genbank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209908.1;transl_table=11 NC_017265.1 RefSeq gene 956964 957482 . - . ID=gene878;Name=YPC_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04405;old_locus_tag=YPC_0952 NC_017265.1 Protein Homology CDS 956964 957482 . - 0 ID=cds839;Parent=gene878;Dbxref=Genbank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11 NC_017265.1 RefSeq gene 958261 959262 . - . ID=gene879;Name=YPC_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04410;old_locus_tag=YPC_0953 NC_017265.1 Protein Homology CDS 958261 959262 . - 0 ID=cds840;Parent=gene879;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11 NC_017265.1 RefSeq gene 959697 960701 . - . ID=gene880;Name=YPC_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04415;old_locus_tag=YPC_0954 NC_017265.1 Protein Homology CDS 959697 960701 . - 0 ID=cds841;Parent=gene880;Dbxref=Genbank:WP_002209904.1;Name=WP_002209904.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209904.1;transl_table=11 NC_017265.1 RefSeq gene 960773 962281 . - . ID=gene881;Name=YPC_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04420;old_locus_tag=YPC_0955 NC_017265.1 Protein Homology CDS 960773 962281 . - 0 ID=cds842;Parent=gene881;Dbxref=Genbank:WP_002209903.1;Name=WP_002209903.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=enolase;protein_id=WP_002209903.1;transl_table=11 NC_017265.1 RefSeq gene 962830 963936 . - . ID=gene882;Name=YPC_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04425;old_locus_tag=YPC_0956 NC_017265.1 Protein Homology CDS 962830 963936 . - 0 ID=cds843;Parent=gene882;Dbxref=Genbank:WP_015683551.1;Name=WP_015683551.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_015683551.1;transl_table=11 NC_017265.1 RefSeq gene 964299 965534 . + . ID=gene883;Name=YPC_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04430;old_locus_tag=YPC_0957 NC_017265.1 Protein Homology CDS 964299 965534 . + 0 ID=cds844;Parent=gene883;Dbxref=Genbank:WP_002209901.1;Name=WP_002209901.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_002209901.1;transl_table=11 NC_017265.1 RefSeq gene 965694 967001 . + . ID=gene884;Name=YPC_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04435;old_locus_tag=YPC_0958 NC_017265.1 Protein Homology CDS 965694 967001 . + 0 ID=cds845;Parent=gene884;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NC_017265.1 RefSeq gene 967013 967864 . + . ID=gene885;Name=YPC_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04440;old_locus_tag=YPC_0959 NC_017265.1 Protein Homology CDS 967013 967864 . + 0 ID=cds846;Parent=gene885;Dbxref=Genbank:WP_015683552.1;Name=WP_015683552.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_015683552.1;transl_table=11 NC_017265.1 RefSeq gene 967869 969071 . + . ID=gene886;Name=YPC_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04445;old_locus_tag=YPC_0960 NC_017265.1 Protein Homology CDS 967869 969071 . + 0 ID=cds847;Parent=gene886;Dbxref=Genbank:WP_002209898.1;Name=WP_002209898.1;gbkey=CDS;product=galactosidase;protein_id=WP_002209898.1;transl_table=11 NC_017265.1 RefSeq gene 969122 971182 . + . ID=gene887;Name=YPC_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04450;old_locus_tag=YPC_0961 NC_017265.1 Protein Homology CDS 969122 971182 . + 0 ID=cds848;Parent=gene887;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NC_017265.1 RefSeq gene 971294 971605 . + . ID=gene888;Name=YPC_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04455;old_locus_tag=YPC_0962 NC_017265.1 Protein Homology CDS 971294 971605 . + 0 ID=cds849;Parent=gene888;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11 NC_017265.1 RefSeq gene 971978 973237 . - . ID=gene889;Name=YPC_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04460;old_locus_tag=YPC_0963 NC_017265.1 Protein Homology CDS 971978 973237 . - 0 ID=cds850;Parent=gene889;Dbxref=Genbank:WP_002215759.1;Name=WP_002215759.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_002215759.1;transl_table=11 NC_017265.1 RefSeq gene 973509 974582 . + . ID=gene890;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YPC_RS04465;old_locus_tag=YPC_0964 NC_017265.1 Protein Homology CDS 973509 974582 . + 0 ID=cds851;Parent=gene890;Dbxref=Genbank:WP_002209894.1;Name=WP_002209894.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_002209894.1;transl_table=11 NC_017265.1 RefSeq repeat_region 974713 974884 . + . ID=id101;gbkey=repeat_region NC_017265.1 RefSeq gene 974927 977302 . - . ID=gene891;Name=YPC_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04470;old_locus_tag=YPC_0967 NC_017265.1 Protein Homology CDS 974927 977302 . - 0 ID=cds852;Parent=gene891;Dbxref=Genbank:WP_002209892.1;Name=WP_002209892.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_002209892.1;transl_table=11 NC_017265.1 RefSeq gene 977453 978761 . - . ID=gene892;Name=YPC_RS04475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS04475;pseudo=true NC_017265.1 Protein Homology CDS 977453 978761 . - 0 ID=cds853;Parent=gene892;Note=involved in the transport of aldohexuronates;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hexuronate transporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 979155 980237 . + . ID=gene893;Name=YPC_RS04480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS04480;old_locus_tag=YPC_0971;pseudo=true NC_017265.1 Protein Homology CDS 979155 980237 . + 0 ID=cds854;Parent=gene893;gbkey=CDS;product=cytochrome C peroxidase;pseudo=true;transl_except=(pos:980139..980141%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 980227 980508 . + . ID=gene894;Name=YPC_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04485 NC_017265.1 Protein Homology CDS 980227 980508 . + 0 ID=cds855;Parent=gene894;Dbxref=Genbank:WP_002215765.1;Name=WP_002215765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215765.1;transl_table=11 NC_017265.1 RefSeq gene 980478 981056 . - . ID=gene895;Name=YPC_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04490;old_locus_tag=YPC_0972 NC_017265.1 Protein Homology CDS 980478 981056 . - 0 ID=cds856;Parent=gene895;Dbxref=Genbank:WP_015683554.1;Name=WP_015683554.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_015683554.1;transl_table=11 NC_017265.1 RefSeq gene 981080 981934 . - . ID=gene896;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=YPC_RS04495;old_locus_tag=YPC_0973 NC_017265.1 Protein Homology CDS 981080 981934 . - 0 ID=cds857;Parent=gene896;Dbxref=Genbank:WP_002209888.1;Name=WP_002209888.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_002209888.1;transl_table=11 NC_017265.1 RefSeq gene 982043 983530 . - . ID=gene897;Name=YPC_RS04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS04500;pseudo=true NC_017265.1 Protein Homology CDS 982043 983530 . - 0 ID=cds858;Parent=gene897;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(983252..983254)%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 983653 985260 . - . ID=gene898;Name=YPC_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04505;old_locus_tag=YPC_0976 NC_017265.1 Protein Homology CDS 983653 985260 . - 0 ID=cds859;Parent=gene898;Dbxref=Genbank:WP_015683557.1;Name=WP_015683557.1;gbkey=CDS;product=sulfatase;protein_id=WP_015683557.1;transl_table=11 NC_017265.1 RefSeq gene 985281 986507 . - . ID=gene899;Name=YPC_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04510;old_locus_tag=YPC_0977 NC_017265.1 Protein Homology CDS 985281 986507 . - 0 ID=cds860;Parent=gene899;Dbxref=Genbank:WP_002209885.1;Name=WP_002209885.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002209885.1;transl_table=11 NC_017265.1 RefSeq gene 986751 987809 . - . ID=gene900;Name=YPC_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04515;old_locus_tag=YPC_0978 NC_017265.1 Protein Homology CDS 986751 987809 . - 0 ID=cds861;Parent=gene900;Dbxref=Genbank:WP_002209884.1;Name=WP_002209884.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_002209884.1;transl_table=11 NC_017265.1 RefSeq gene 987825 988579 . - . ID=gene901;Name=YPC_RS04520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS04520;pseudo=true NC_017265.1 Protein Homology CDS 987825 988579 . - 0 ID=cds862;Parent=gene901;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 988775 989941 . - . ID=gene902;Name=YPC_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04525;old_locus_tag=YPC_0981 NC_017265.1 Protein Homology CDS 988775 989941 . - 0 ID=cds863;Parent=gene902;Dbxref=Genbank:WP_002209882.1;Name=WP_002209882.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002209882.1;transl_table=11 NC_017265.1 RefSeq gene 989944 990384 . - . ID=gene903;Name=YPC_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04530;old_locus_tag=YPC_0982 NC_017265.1 Protein Homology CDS 989944 990384 . - 0 ID=cds864;Parent=gene903;Dbxref=Genbank:WP_002209881.1;Name=WP_002209881.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_002209881.1;transl_table=11 NC_017265.1 RefSeq gene 990470 991360 . - . ID=gene904;Name=YPC_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04535 NC_017265.1 Protein Homology CDS 990470 991360 . - 0 ID=cds865;Parent=gene904;Dbxref=Genbank:WP_002209880.1;Name=WP_002209880.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NC_017265.1 RefSeq gene 991350 992138 . - . ID=gene905;Name=YPC_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04540 NC_017265.1 Protein Homology CDS 991350 992138 . - 0 ID=cds866;Parent=gene905;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NC_017265.1 RefSeq gene 992185 992682 . - . ID=gene906;Name=YPC_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04545;old_locus_tag=YPC_0985 NC_017265.1 Protein Homology CDS 992185 992682 . - 0 ID=cds867;Parent=gene906;Dbxref=Genbank:WP_002209878.1;Name=WP_002209878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NC_017265.1 RefSeq gene 992700 993866 . - . ID=gene907;Name=YPC_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04550;old_locus_tag=YPC_0986 NC_017265.1 Protein Homology CDS 992700 993866 . - 0 ID=cds868;Parent=gene907;Dbxref=Genbank:WP_002209877.1;Name=WP_002209877.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_002209877.1;transl_table=11 NC_017265.1 RefSeq gene 993863 995161 . - . ID=gene908;Name=YPC_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04555;old_locus_tag=YPC_0987 NC_017265.1 Protein Homology CDS 993863 995161 . - 0 ID=cds869;Parent=gene908;Dbxref=Genbank:WP_002209876.1;Name=WP_002209876.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose 6-phosphate kinase;protein_id=WP_002209876.1;transl_table=11 NC_017265.1 RefSeq gene 995211 995987 . - . ID=gene909;Name=YPC_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04560;old_locus_tag=YPC_0988 NC_017265.1 Protein Homology CDS 995211 995987 . - 0 ID=cds870;Parent=gene909;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11 NC_017265.1 RefSeq gene 996827 998380 . + . ID=gene910;Name=YPC_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04565;old_locus_tag=YPC_0991 NC_017265.1 Protein Homology CDS 996827 998380 . + 0 ID=cds871;Parent=gene910;Dbxref=Genbank:WP_002209873.1;Name=WP_002209873.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209873.1;transl_table=11 NC_017265.1 RefSeq repeat_region 998560 1001398 . + . ID=id102;gbkey=repeat_region NC_017265.1 RefSeq gene 998832 999266 . - . ID=gene911;Name=YPC_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04570;old_locus_tag=YPC_0992 NC_017265.1 Protein Homology CDS 998832 999266 . - 0 ID=cds872;Parent=gene911;Dbxref=Genbank:WP_002209872.1;Name=WP_002209872.1;gbkey=CDS;product=transposase;protein_id=WP_002209872.1;transl_table=11 NC_017265.1 RefSeq gene 999323 1000345 . + . ID=gene912;Name=YPC_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04575;old_locus_tag=YPC_0993 NC_017265.1 Protein Homology CDS 999323 1000345 . + 0 ID=cds873;Parent=gene912;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 1000345 1001124 . + . ID=gene913;Name=YPC_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04580;old_locus_tag=YPC_0994 NC_017265.1 Protein Homology CDS 1000345 1001124 . + 0 ID=cds874;Parent=gene913;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 1001469 1004582 . - . ID=gene914;Name=YPC_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04585;old_locus_tag=YPC_0996 NC_017265.1 Protein Homology CDS 1001469 1004582 . - 0 ID=cds875;Parent=gene914;Dbxref=Genbank:WP_002214081.1;Name=WP_002214081.1;gbkey=CDS;product=chondroitin ABC lyase;protein_id=WP_002214081.1;transl_table=11 NC_017265.1 RefSeq gene 1004652 1006838 . - . ID=gene915;Name=YPC_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04590;old_locus_tag=YPC_0997 NC_017265.1 Protein Homology CDS 1004652 1006838 . - 0 ID=cds876;Parent=gene915;Dbxref=Genbank:WP_002209869.1;Name=WP_002209869.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209869.1;transl_table=11 NC_017265.1 RefSeq gene 1006953 1007903 . - . ID=gene916;Name=YPC_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04595;old_locus_tag=YPC_0998 NC_017265.1 Protein Homology CDS 1006953 1007903 . - 0 ID=cds877;Parent=gene916;Dbxref=Genbank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209868.1;transl_table=11 NC_017265.1 RefSeq gene 1007925 1008119 . - . ID=gene917;Name=YPC_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04600;old_locus_tag=YPC_0999 NC_017265.1 Protein Homology CDS 1007925 1008119 . - 0 ID=cds878;Parent=gene917;Dbxref=Genbank:WP_002214083.1;Name=WP_002214083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214083.1;transl_table=11 NC_017265.1 RefSeq gene 1008506 1008694 . - . ID=gene918;Name=YPC_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04605;old_locus_tag=YPC_1000 NC_017265.1 Protein Homology CDS 1008506 1008694 . - 0 ID=cds879;Parent=gene918;Dbxref=Genbank:WP_002214085.1;Name=WP_002214085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214085.1;transl_table=11 NC_017265.1 RefSeq gene 1009190 1009945 . + . ID=gene919;Name=YPC_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04610;old_locus_tag=YPC_1002 NC_017265.1 Protein Homology CDS 1009190 1009945 . + 0 ID=cds880;Parent=gene919;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NC_017265.1 RefSeq gene 1010688 1011104 . + . ID=gene920;Name=YPC_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04615;old_locus_tag=YPC_1003 NC_017265.1 Protein Homology CDS 1010688 1011104 . + 0 ID=cds881;Parent=gene920;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11 NC_017265.1 RefSeq gene 1011274 1011675 . + . ID=gene921;Name=YPC_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04620 NC_017265.1 Protein Homology CDS 1011274 1011675 . + 0 ID=cds882;Parent=gene921;Dbxref=Genbank:WP_002209865.1;Name=WP_002209865.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_002209865.1;transl_table=11 NC_017265.1 RefSeq gene 1011756 1013678 . + . ID=gene922;Name=YPC_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04625;old_locus_tag=YPC_1005 NC_017265.1 Protein Homology CDS 1011756 1013678 . + 0 ID=cds883;Parent=gene922;Dbxref=Genbank:WP_002220086.1;Name=WP_002220086.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_002220086.1;transl_table=11 NC_017265.1 RefSeq gene 1013675 1015186 . + . ID=gene923;Name=YPC_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04630;old_locus_tag=YPC_1006 NC_017265.1 Protein Homology CDS 1013675 1015186 . + 0 ID=cds884;Parent=gene923;Dbxref=Genbank:WP_002209863.1;Name=WP_002209863.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_002209863.1;transl_table=11 NC_017265.1 RefSeq gene 1015173 1015367 . + . ID=gene924;Name=YPC_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04635;old_locus_tag=YPC_1007 NC_017265.1 Protein Homology CDS 1015173 1015367 . + 0 ID=cds885;Parent=gene924;Dbxref=Genbank:WP_002214090.1;Name=WP_002214090.1;gbkey=CDS;product=general secretion pathway protein GspF;protein_id=WP_002214090.1;transl_table=11 NC_017265.1 RefSeq gene 1015328 1016374 . + . ID=gene925;Name=YPC_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04640;old_locus_tag=YPC_1008 NC_017265.1 Protein Homology CDS 1015328 1016374 . + 0 ID=cds886;Parent=gene925;Dbxref=Genbank:WP_002229014.1;Name=WP_002229014.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_002229014.1;transl_table=11 NC_017265.1 RefSeq gene 1016394 1016831 . + . ID=gene926;Name=YPC_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04645;old_locus_tag=YPC_1009 NC_017265.1 Protein Homology CDS 1016394 1016831 . + 0 ID=cds887;Parent=gene926;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11 NC_017265.1 RefSeq gene 1016836 1017378 . + . ID=gene927;Name=YPC_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04650;old_locus_tag=YPC_1010 NC_017265.1 Protein Homology CDS 1016836 1017378 . + 0 ID=cds888;Parent=gene927;Dbxref=Genbank:WP_002214092.1;Name=WP_002214092.1;gbkey=CDS;product=general secretion pathway protein GspH;protein_id=WP_002214092.1;transl_table=11 NC_017265.1 RefSeq gene 1017470 1017760 . + . ID=gene928;Name=YPC_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04655;old_locus_tag=YPC_1011 NC_017265.1 Protein Homology CDS 1017470 1017760 . + 0 ID=cds889;Parent=gene928;Dbxref=Genbank:WP_002214093.1;Name=WP_002214093.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_002214093.1;transl_table=11 NC_017265.1 RefSeq gene 1017753 1018349 . + . ID=gene929;Name=YPC_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04660;old_locus_tag=YPC_1012 NC_017265.1 Protein Homology CDS 1017753 1018349 . + 0 ID=cds890;Parent=gene929;Dbxref=Genbank:WP_002223730.1;Name=WP_002223730.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_002223730.1;transl_table=11 NC_017265.1 RefSeq gene 1018418 1019314 . + . ID=gene930;Name=YPC_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04665;old_locus_tag=YPC_1013 NC_017265.1 Protein Homology CDS 1018418 1019314 . + 0 ID=cds891;Parent=gene930;Dbxref=Genbank:WP_002209859.1;Name=WP_002209859.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_002209859.1;transl_table=11 NC_017265.1 RefSeq gene 1019298 1020488 . + . ID=gene931;Name=YPC_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04670;old_locus_tag=YPC_1014 NC_017265.1 Protein Homology CDS 1019298 1020488 . + 0 ID=cds892;Parent=gene931;Dbxref=Genbank:WP_002209858.1;Name=WP_002209858.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_002209858.1;transl_table=11 NC_017265.1 RefSeq gene 1020497 1020946 . + . ID=gene932;Name=YPC_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04675;old_locus_tag=YPC_1015 NC_017265.1 Protein Homology CDS 1020497 1020946 . + 0 ID=cds893;Parent=gene932;Dbxref=Genbank:WP_002226092.1;Name=WP_002226092.1;gbkey=CDS;product=membrane protein;protein_id=WP_002226092.1;transl_table=11 NC_017265.1 RefSeq gene 1020975 1021814 . + . ID=gene933;Name=YPC_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04680;old_locus_tag=YPC_1016 NC_017265.1 Protein Homology CDS 1020975 1021814 . + 0 ID=cds894;Parent=gene933;Dbxref=Genbank:WP_002209856.1;Name=WP_002209856.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11 NC_017265.1 RefSeq gene 1021866 1022171 . - . ID=gene934;Name=YPC_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04685;old_locus_tag=YPC_1017 NC_017265.1 Protein Homology CDS 1021866 1022171 . - 0 ID=cds895;Parent=gene934;Dbxref=Genbank:WP_002214097.1;Name=WP_002214097.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002214097.1;transl_table=11 NC_017265.1 RefSeq gene 1022455 1023171 . + . ID=gene935;Name=YPC_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04690;old_locus_tag=YPC_1018 NC_017265.1 Protein Homology CDS 1022455 1023171 . + 0 ID=cds896;Parent=gene935;Dbxref=Genbank:WP_002214099.1;Name=WP_002214099.1;gbkey=CDS;product=regulatory membrane protein;protein_id=WP_002214099.1;transl_table=11 NC_017265.1 RefSeq gene 1023168 1023569 . + . ID=gene936;Name=YPC_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04695;old_locus_tag=YPC_1019 NC_017265.1 Protein Homology CDS 1023168 1023569 . + 0 ID=cds897;Parent=gene936;Dbxref=Genbank:WP_002214100.1;Name=WP_002214100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214100.1;transl_table=11 NC_017265.1 RefSeq gene 1023724 1025415 . + . ID=gene937;Name=YPC_RS04700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS04700;pseudo=true NC_017265.1 Protein Homology CDS 1023724 1025415 . + 0 ID=cds898;Parent=gene937;gbkey=CDS;product=chemotaxis protein;pseudo=true;transl_except=(pos:1024201..1024203%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 1025401 1026036 . - . ID=gene938;Name=YPC_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04705;old_locus_tag=YPC_1022 NC_017265.1 Protein Homology CDS 1025401 1026036 . - 0 ID=cds899;Parent=gene938;Dbxref=Genbank:WP_002209852.1;Name=WP_002209852.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002209852.1;transl_table=11 NC_017265.1 RefSeq gene 1026149 1027036 . - . ID=gene939;Name=YPC_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04710;old_locus_tag=YPC_1023 NC_017265.1 Protein Homology CDS 1026149 1027036 . - 0 ID=cds900;Parent=gene939;Dbxref=Genbank:WP_002209850.1;Name=WP_002209850.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002209850.1;transl_table=11 NC_017265.1 RefSeq gene 1027143 1028051 . + . ID=gene940;Name=YPC_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04715;old_locus_tag=YPC_1024 NC_017265.1 Protein Homology CDS 1027143 1028051 . + 0 ID=cds901;Parent=gene940;Dbxref=Genbank:WP_002209849.1;Name=WP_002209849.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NC_017265.1 RefSeq gene 1028420 1029580 . + . ID=gene941;Name=YPC_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04720;old_locus_tag=YPC_1025 NC_017265.1 Protein Homology CDS 1028420 1029580 . + 0 ID=cds902;Parent=gene941;Dbxref=Genbank:WP_002209848.1;Name=WP_002209848.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11 NC_017265.1 RefSeq gene 1029577 1030518 . - . ID=gene942;Name=YPC_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04725;old_locus_tag=YPC_1026 NC_017265.1 Protein Homology CDS 1029577 1030518 . - 0 ID=cds903;Parent=gene942;Dbxref=Genbank:WP_002209847.1;Name=WP_002209847.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209847.1;transl_table=11 NC_017265.1 RefSeq gene 1030733 1031995 . + . ID=gene943;Name=YPC_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04730;old_locus_tag=YPC_1027 NC_017265.1 Protein Homology CDS 1030733 1031995 . + 0 ID=cds904;Parent=gene943;Dbxref=Genbank:WP_002209846.1;Name=WP_002209846.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_002209846.1;transl_table=11 NC_017265.1 RefSeq gene 1031992 1033014 . - . ID=gene944;Name=YPC_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04735;old_locus_tag=YPC_1028 NC_017265.1 Protein Homology CDS 1031992 1033014 . - 0 ID=cds905;Parent=gene944;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11 NC_017265.1 RefSeq gene 1033459 1035585 . + . ID=gene945;Name=YPC_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04740;old_locus_tag=YPC_1029 NC_017265.1 Protein Homology CDS 1033459 1035585 . + 0 ID=cds906;Parent=gene945;Dbxref=Genbank:WP_011055709.1;Name=WP_011055709.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_011055709.1;transl_table=11 NC_017265.1 RefSeq gene 1036034 1036243 . + . ID=gene946;Name=YPC_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04745 NC_017265.1 Protein Homology CDS 1036034 1036243 . + 0 ID=cds907;Parent=gene946;Dbxref=Genbank:WP_002228643.1;Name=WP_002228643.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002228643.1;transl_table=11 NC_017265.1 RefSeq gene 1036231 1038189 . + . ID=gene947;Name=YPC_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04750 NC_017265.1 Protein Homology CDS 1036231 1038189 . + 0 ID=cds908;Parent=gene947;Dbxref=Genbank:WP_042468323.1;Name=WP_042468323.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=acyl-ACP synthetase;protein_id=WP_042468323.1;transl_table=11 NC_017265.1 RefSeq gene 1038186 1039406 . + . ID=gene948;Name=YPC_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04755;old_locus_tag=YPC_1033 NC_017265.1 Protein Homology CDS 1038186 1039406 . + 0 ID=cds909;Parent=gene948;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NC_017265.1 RefSeq gene 1039435 1039668 . - . ID=gene949;Name=YPC_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04760;old_locus_tag=YPC_1034 NC_017265.1 Protein Homology CDS 1039435 1039668 . - 0 ID=cds910;Parent=gene949;Dbxref=Genbank:WP_002228641.1;Name=WP_002228641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228641.1;transl_table=11 NC_017265.1 RefSeq gene 1039747 1039998 . + . ID=gene950;Name=YPC_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04765 NC_017265.1 Protein Homology CDS 1039747 1039998 . + 0 ID=cds911;Parent=gene950;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1040151 1040319 . + . ID=id103;gbkey=repeat_region NC_017265.1 RefSeq gene 1040375 1041415 . - . ID=gene951;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YPC_RS04770;old_locus_tag=YPC_1037 NC_017265.1 Protein Homology CDS 1040375 1041415 . - 0 ID=cds912;Parent=gene951;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NC_017265.1 RefSeq gene 1041822 1042508 . - . ID=gene952;Name=YPC_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04775;old_locus_tag=YPC_1039 NC_017265.1 Protein Homology CDS 1041822 1042508 . - 0 ID=cds913;Parent=gene952;Dbxref=Genbank:WP_002209838.1;Name=WP_002209838.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_002209838.1;transl_table=11 NC_017265.1 RefSeq gene 1042741 1042932 . + . ID=gene953;Name=YPC_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04780 NC_017265.1 Protein Homology CDS 1042741 1042932 . + 0 ID=cds914;Parent=gene953;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11 NC_017265.1 RefSeq gene 1042929 1043180 . + . ID=gene954;Name=YPC_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04785 NC_017265.1 Protein Homology CDS 1042929 1043180 . + 0 ID=cds915;Parent=gene954;Dbxref=Genbank:WP_002228075.1;Name=WP_002228075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228075.1;transl_table=11 NC_017265.1 RefSeq gene 1043206 1043733 . + . ID=gene955;Name=YPC_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04790;old_locus_tag=YPC_1040 NC_017265.1 Protein Homology CDS 1043206 1043733 . + 0 ID=cds916;Parent=gene955;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NC_017265.1 RefSeq gene 1043746 1045991 . + . ID=gene956;Name=YPC_RS04795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS04795;pseudo=true NC_017265.1 Protein Homology CDS 1043746 1045991 . + 0 ID=cds917;Parent=gene956;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1046242 1047114 . + . ID=gene957;Name=YPC_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04800;old_locus_tag=YPC_1043 NC_017265.1 Protein Homology CDS 1046242 1047114 . + 0 ID=cds918;Parent=gene957;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NC_017265.1 RefSeq gene 1047121 1047915 . + . ID=gene958;Name=YPC_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04805;old_locus_tag=YPC_1044 NC_017265.1 Protein Homology CDS 1047121 1047915 . + 0 ID=cds919;Parent=gene958;Dbxref=Genbank:WP_002211384.1;Name=WP_002211384.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_002211384.1;transl_table=11 NC_017265.1 RefSeq gene 1047935 1048156 . + . ID=gene959;Name=YPC_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04810 NC_017265.1 Protein Homology CDS 1047935 1048156 . + 0 ID=cds920;Parent=gene959;Dbxref=Genbank:WP_032485737.1;Name=WP_032485737.1;gbkey=CDS;product=membrane protein;protein_id=WP_032485737.1;transl_table=11 NC_017265.1 RefSeq gene 1048143 1048712 . + . ID=gene960;Name=YPC_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04815;old_locus_tag=YPC_1045 NC_017265.1 Protein Homology CDS 1048143 1048712 . + 0 ID=cds921;Parent=gene960;Dbxref=Genbank:WP_002228638.1;Name=WP_002228638.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002228638.1;transl_table=11 NC_017265.1 RefSeq gene 1048703 1049311 . + . ID=gene961;Name=YPC_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04820;old_locus_tag=YPC_1046 NC_017265.1 Protein Homology CDS 1048703 1049311 . + 0 ID=cds922;Parent=gene961;Dbxref=Genbank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002211630.1;transl_table=11 NC_017265.1 RefSeq gene 1049308 1049778 . + . ID=gene962;Name=YPC_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04825;old_locus_tag=YPC_1047 NC_017265.1 Protein Homology CDS 1049308 1049778 . + 0 ID=cds923;Parent=gene962;Dbxref=Genbank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211629.1;transl_table=11 NC_017265.1 RefSeq gene 1049811 1050176 . + . ID=gene963;Name=YPC_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04830;old_locus_tag=YPC_1048 NC_017265.1 Protein Homology CDS 1049811 1050176 . + 0 ID=cds924;Parent=gene963;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11 NC_017265.1 RefSeq gene 1050311 1053682 . + . ID=gene964;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YPC_RS04835;old_locus_tag=YPC_1049 NC_017265.1 Protein Homology CDS 1050311 1053682 . + 0 ID=cds925;Parent=gene964;Dbxref=Genbank:WP_002211627.1;Name=WP_002211627.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_002211627.1;transl_table=11 NC_017265.1 RefSeq gene 1053764 1056652 . + . ID=gene965;Name=YPC_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04840;old_locus_tag=YPC_1050 NC_017265.1 Protein Homology CDS 1053764 1056652 . + 0 ID=cds926;Parent=gene965;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11 NC_017265.1 RefSeq gene 1056649 1060311 . + . ID=gene966;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=YPC_RS04845 NC_017265.1 Protein Homology CDS 1056649 1060311 . + 0 ID=cds927;Parent=gene966;Dbxref=Genbank:WP_002215833.1;Name=WP_002215833.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_002215833.1;transl_table=11 NC_017265.1 RefSeq gene 1060308 1062266 . + . ID=gene967;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YPC_RS04850 NC_017265.1 Protein Homology CDS 1060308 1062266 . + 0 ID=cds928;Parent=gene967;Dbxref=Genbank:WP_002215834.1;Name=WP_002215834.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_002215834.1;transl_table=11 NC_017265.1 RefSeq gene 1062421 1063746 . - . ID=gene968;Name=YPC_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04855;old_locus_tag=YPC_1053 NC_017265.1 Protein Homology CDS 1062421 1063746 . - 0 ID=cds929;Parent=gene968;Dbxref=Genbank:WP_002211624.1;Name=WP_002211624.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=amino-acid acetyltransferase;protein_id=WP_002211624.1;transl_table=11 NC_017265.1 RefSeq gene 1063982 1065232 . + . ID=gene969;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YPC_RS04860;old_locus_tag=YPC_1054 NC_017265.1 Protein Homology CDS 1063982 1065232 . + 0 ID=cds930;Parent=gene969;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11 NC_017265.1 RefSeq gene 1065462 1065538 . - . ID=gene970;Name=YPC_RS04865;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS04865;old_locus_tag=YPC_1055 NC_017265.1 tRNAscan-SE tRNA 1065462 1065538 . - . ID=rna37;Parent=gene970;anticodon=(pos:complement(1065502..1065504));gbkey=tRNA;product=tRNA-Met NC_017265.1 tRNAscan-SE exon 1065462 1065538 . - . ID=id104;Parent=rna37;anticodon=(pos:complement(1065502..1065504));gbkey=tRNA;product=tRNA-Met NC_017265.1 RefSeq gene 1065662 1065738 . - . ID=gene971;Name=YPC_RS04870;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS04870;old_locus_tag=YPC_1056 NC_017265.1 tRNAscan-SE tRNA 1065662 1065738 . - . ID=rna38;Parent=gene971;anticodon=(pos:complement(1065702..1065704));gbkey=tRNA;product=tRNA-Met NC_017265.1 tRNAscan-SE exon 1065662 1065738 . - . ID=id105;Parent=rna38;anticodon=(pos:complement(1065702..1065704));gbkey=tRNA;product=tRNA-Met NC_017265.1 RefSeq gene 1065954 1067126 . + . ID=gene972;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YPC_RS04875;old_locus_tag=YPC_1057 NC_017265.1 Protein Homology CDS 1065954 1067126 . + 0 ID=cds931;Parent=gene972;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11 NC_017265.1 RefSeq gene 1067269 1068096 . + . ID=gene973;Name=YPC_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04880;old_locus_tag=YPC_1058 NC_017265.1 Protein Homology CDS 1067269 1068096 . + 0 ID=cds932;Parent=gene973;Dbxref=Genbank:WP_002212114.1;Name=WP_002212114.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_002212114.1;transl_table=11 NC_017265.1 RefSeq gene 1068132 1068575 . - . ID=gene974;Name=YPC_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04885;old_locus_tag=YPC_1059 NC_017265.1 Protein Homology CDS 1068132 1068575 . - 0 ID=cds933;Parent=gene974;Dbxref=Genbank:WP_002212115.1;Name=WP_002212115.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_002212115.1;transl_table=11 NC_017265.1 RefSeq gene 1068710 1069915 . - . ID=gene975;Name=YPC_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04890;old_locus_tag=YPC_1060 NC_017265.1 Protein Homology CDS 1068710 1069915 . - 0 ID=cds934;Parent=gene975;Dbxref=Genbank:WP_002212116.1;Name=WP_002212116.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_002212116.1;transl_table=11 NC_017265.1 RefSeq gene 1070575 1071492 . + . ID=gene976;Name=YPC_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04895;old_locus_tag=YPC_1063 NC_017265.1 Protein Homology CDS 1070575 1071492 . + 0 ID=cds935;Parent=gene976;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11 NC_017265.1 RefSeq gene 1071673 1072053 . + . ID=gene977;Name=YPC_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04900;old_locus_tag=YPC_1064 NC_017265.1 Protein Homology CDS 1071673 1072053 . + 0 ID=cds936;Parent=gene977;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11 NC_017265.1 RefSeq gene 1072046 1073152 . + . ID=gene978;Name=YPC_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04905;old_locus_tag=YPC_1065 NC_017265.1 Protein Homology CDS 1072046 1073152 . + 0 ID=cds937;Parent=gene978;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1073193 1073371 . + . ID=id106;gbkey=repeat_region NC_017265.1 RefSeq gene 1073403 1074158 . - . ID=gene979;Name=YPC_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04910;old_locus_tag=YPC_1066 NC_017265.1 Protein Homology CDS 1073403 1074158 . - 0 ID=cds938;Parent=gene979;Dbxref=Genbank:WP_002215970.1;Name=WP_002215970.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_002215970.1;transl_table=11 NC_017265.1 RefSeq gene 1074418 1075782 . - . ID=gene980;Name=YPC_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04915;old_locus_tag=YPC_1067 NC_017265.1 Protein Homology CDS 1074418 1075782 . - 0 ID=cds939;Parent=gene980;Dbxref=Genbank:WP_002212121.1;Name=WP_002212121.1;gbkey=CDS;product=LOG family protein;protein_id=WP_002212121.1;transl_table=11 NC_017265.1 RefSeq gene 1075935 1076780 . - . ID=gene981;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YPC_RS04920;old_locus_tag=YPC_1068 NC_017265.1 Protein Homology CDS 1075935 1076780 . - 0 ID=cds940;Parent=gene981;Dbxref=Genbank:WP_002212122.1;Name=WP_002212122.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_002212122.1;transl_table=11 NC_017265.1 RefSeq gene 1076912 1077463 . + . ID=gene982;Name=YPC_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04925;old_locus_tag=YPC_1069 NC_017265.1 Protein Homology CDS 1076912 1077463 . + 0 ID=cds941;Parent=gene982;Dbxref=Genbank:WP_002212123.1;Name=WP_002212123.1;gbkey=CDS;product=protein Syd;protein_id=WP_002212123.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1078001 1078722 . + . ID=id107;gbkey=repeat_region NC_017265.1 RefSeq gene 1078153 1078611 . + . ID=gene983;Name=YPC_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04930;old_locus_tag=YPC_1071 NC_017265.1 Protein Homology CDS 1078153 1078611 . + 0 ID=cds942;Parent=gene983;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 1078865 1079197 . + . ID=gene984;Name=YPC_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04935;old_locus_tag=YPC_1072 NC_017265.1 Protein Homology CDS 1078865 1079197 . + 0 ID=cds943;Parent=gene984;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11 NC_017265.1 RefSeq gene 1079197 1079970 . + . ID=gene985;Name=YPC_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04940;old_locus_tag=YPC_1073 NC_017265.1 Protein Homology CDS 1079197 1079970 . + 0 ID=cds944;Parent=gene985;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11 NC_017265.1 RefSeq gene 1079998 1080447 . + . ID=gene986;Name=YPC_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04945;old_locus_tag=YPC_1074 NC_017265.1 Protein Homology CDS 1079998 1080447 . + 0 ID=cds945;Parent=gene986;Dbxref=Genbank:WP_002212126.1;Name=WP_002212126.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002212126.1;transl_table=11 NC_017265.1 RefSeq gene 1080537 1080926 . - . ID=gene987;Name=YPC_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04950;old_locus_tag=YPC_1075 NC_017265.1 Protein Homology CDS 1080537 1080926 . - 0 ID=cds946;Parent=gene987;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1081010 1081731 . + . ID=id108;gbkey=repeat_region NC_017265.1 RefSeq gene 1081122 1081580 . - . ID=gene988;Name=YPC_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04955;old_locus_tag=YPC_1077 NC_017265.1 Protein Homology CDS 1081122 1081580 . - 0 ID=cds947;Parent=gene988;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 1081761 1082585 . - . ID=gene989;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YPC_RS04960;old_locus_tag=YPC_1079 NC_017265.1 Protein Homology CDS 1081761 1082585 . - 0 ID=cds948;Parent=gene989;Dbxref=Genbank:WP_002212128.1;Name=WP_002212128.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NC_017265.1 RefSeq gene 1082760 1085441 . - . ID=gene990;Name=YPC_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04965;old_locus_tag=YPC_1080 NC_017265.1 Protein Homology CDS 1082760 1085441 . - 0 ID=cds949;Parent=gene990;Dbxref=Genbank:WP_002212129.1;Name=WP_002212129.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_002212129.1;transl_table=11 NC_017265.1 RefSeq gene 1085501 1086292 . - . ID=gene991;Name=YPC_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04970;old_locus_tag=YPC_1081 NC_017265.1 Protein Homology CDS 1085501 1086292 . - 0 ID=cds950;Parent=gene991;Dbxref=Genbank:WP_002212130.1;Name=WP_002212130.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_002212130.1;transl_table=11 NC_017265.1 RefSeq gene 1086727 1087452 . + . ID=gene992;Name=YPC_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04975;old_locus_tag=YPC_1083 NC_017265.1 Protein Homology CDS 1086727 1087452 . + 0 ID=cds951;Parent=gene992;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NC_017265.1 RefSeq gene 1087580 1088437 . + . ID=gene993;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YPC_RS04980;old_locus_tag=YPC_1084 NC_017265.1 Protein Homology CDS 1087580 1088437 . + 0 ID=cds952;Parent=gene993;Dbxref=Genbank:WP_002212132.1;Name=WP_002212132.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NC_017265.1 RefSeq gene 1088646 1089371 . + . ID=gene994;Name=YPC_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04985;old_locus_tag=YPC_1085 NC_017265.1 Protein Homology CDS 1088646 1089371 . + 0 ID=cds953;Parent=gene994;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11 NC_017265.1 RefSeq gene 1089507 1090064 . + . ID=gene995;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YPC_RS04990;old_locus_tag=YPC_1086 NC_017265.1 Protein Homology CDS 1089507 1090064 . + 0 ID=cds954;Parent=gene995;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11 NC_017265.1 RefSeq gene 1090278 1091474 . + . ID=gene996;Name=YPC_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS04995;old_locus_tag=YPC_1087 NC_017265.1 Protein Homology CDS 1090278 1091474 . + 0 ID=cds955;Parent=gene996;Dbxref=Genbank:WP_002212135.1;Name=WP_002212135.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11 NC_017265.1 RefSeq gene 1091698 1092456 . + . ID=gene997;Name=YPC_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05000;old_locus_tag=YPC_1088 NC_017265.1 Protein Homology CDS 1091698 1092456 . + 0 ID=cds956;Parent=gene997;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11 NC_017265.1 RefSeq gene 1092466 1093314 . + . ID=gene998;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YPC_RS05005;old_locus_tag=YPC_1089 NC_017265.1 Protein Homology CDS 1092466 1093314 . + 0 ID=cds957;Parent=gene998;Dbxref=Genbank:WP_002212137.1;Name=WP_002212137.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_002212137.1;transl_table=11 NC_017265.1 RefSeq gene 1093343 1094698 . + . ID=gene999;Name=YPC_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05010;old_locus_tag=YPC_1090 NC_017265.1 Protein Homology CDS 1093343 1094698 . + 0 ID=cds958;Parent=gene999;Dbxref=Genbank:WP_002212138.1;Name=WP_002212138.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=protease RseP;protein_id=WP_002212138.1;transl_table=11 NC_017265.1 RefSeq gene 1094735 1097122 . + . ID=gene1000;Name=YPC_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05015;old_locus_tag=YPC_1091 NC_017265.1 Protein Homology CDS 1094735 1097122 . + 0 ID=cds959;Parent=gene1000;Dbxref=Genbank:WP_015683563.1;Name=WP_015683563.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor YaeT;protein_id=WP_015683563.1;transl_table=11 NC_017265.1 RefSeq gene 1097280 1097777 . + . ID=gene1001;Name=YPC_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05020;old_locus_tag=YPC_1092 NC_017265.1 Protein Homology CDS 1097280 1097777 . + 0 ID=cds960;Parent=gene1001;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11 NC_017265.1 RefSeq gene 1097781 1098803 . + . ID=gene1002;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YPC_RS05025;old_locus_tag=YPC_1093 NC_017265.1 Protein Homology CDS 1097781 1098803 . + 0 ID=cds961;Parent=gene1002;Dbxref=Genbank:WP_002212141.1;Name=WP_002212141.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002212141.1;transl_table=11 NC_017265.1 RefSeq gene 1098961 1099491 . + . ID=gene1003;Name=YPC_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05030;old_locus_tag=YPC_1094 NC_017265.1 Protein Homology CDS 1098961 1099491 . + 0 ID=cds962;Parent=gene1003;Dbxref=Genbank:WP_002217656.1;Name=WP_002217656.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002217656.1;transl_table=11 NC_017265.1 RefSeq gene 1099495 1100283 . + . ID=gene1004;Name=YPC_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05035;old_locus_tag=YPC_1095 NC_017265.1 Protein Homology CDS 1099495 1100283 . + 0 ID=cds963;Parent=gene1004;Dbxref=Genbank:WP_002212143.1;Name=WP_002212143.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NC_017265.1 RefSeq gene 1100287 1101471 . + . ID=gene1005;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YPC_RS05040;old_locus_tag=YPC_1096 NC_017265.1 Protein Homology CDS 1100287 1101471 . + 0 ID=cds964;Parent=gene1005;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NC_017265.1 RefSeq gene 1101468 1102064 . + . ID=gene1006;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YPC_RS05045;old_locus_tag=YPC_1097 NC_017265.1 Protein Homology CDS 1101468 1102064 . + 0 ID=cds965;Parent=gene1006;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NC_017265.1 RefSeq gene 1102227 1105709 . + . ID=gene1007;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPC_RS05050;old_locus_tag=YPC_1098 NC_017265.1 Protein Homology CDS 1102227 1105709 . + 0 ID=cds966;Parent=gene1007;Dbxref=Genbank:WP_002228634.1;Name=WP_002228634.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_002228634.1;transl_table=11 NC_017265.1 RefSeq gene 1105722 1106681 . + . ID=gene1008;Name=YPC_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05055;old_locus_tag=YPC_1099 NC_017265.1 Protein Homology CDS 1105722 1106681 . + 0 ID=cds967;Parent=gene1008;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NC_017265.1 RefSeq gene 1106865 1107263 . + . ID=gene1009;Name=YPC_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05060;old_locus_tag=YPC_1100 NC_017265.1 Protein Homology CDS 1106865 1107263 . + 0 ID=cds968;Parent=gene1009;Dbxref=Genbank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;product=lyase;protein_id=WP_002212148.1;transl_table=11 NC_017265.1 RefSeq gene 1107265 1108647 . + . ID=gene1010;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YPC_RS05065;old_locus_tag=YPC_1101 NC_017265.1 Protein Homology CDS 1107265 1108647 . + 0 ID=cds969;Parent=gene1010;Dbxref=Genbank:WP_002212149.1;Name=WP_002212149.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_002212149.1;transl_table=11 NC_017265.1 RefSeq gene 1108884 1109201 . + . ID=gene1011;Name=YPC_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05070;old_locus_tag=YPC_1102 NC_017265.1 Protein Homology CDS 1108884 1109201 . + 0 ID=cds970;Parent=gene1011;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11 NC_017265.1 RefSeq gene 1109466 1109726 . - . ID=gene1012;Name=YPC_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05075;old_locus_tag=YPC_1103 NC_017265.1 Protein Homology CDS 1109466 1109726 . - 0 ID=cds971;Parent=gene1012;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NC_017265.1 RefSeq gene 1109713 1109913 . - . ID=gene1013;Name=YPC_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05080;old_locus_tag=YPC_1104 NC_017265.1 Protein Homology CDS 1109713 1109913 . - 0 ID=cds972;Parent=gene1013;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11 NC_017265.1 RefSeq gene 1110155 1110703 . + . ID=gene1014;Name=YPC_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05085;old_locus_tag=YPC_1105 NC_017265.1 Protein Homology CDS 1110155 1110703 . + 0 ID=cds973;Parent=gene1014;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11 NC_017265.1 RefSeq gene 1110706 1111122 . + . ID=gene1015;Name=YPC_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05090;old_locus_tag=YPC_1106 NC_017265.1 Protein Homology CDS 1110706 1111122 . + 0 ID=cds974;Parent=gene1015;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11 NC_017265.1 RefSeq gene 1111207 1111890 . + . ID=gene1016;Name=YPC_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05095;old_locus_tag=YPC_1107 NC_017265.1 Protein Homology CDS 1111207 1111890 . + 0 ID=cds975;Parent=gene1016;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11 NC_017265.1 RefSeq gene 1112005 1113723 . - . ID=gene1017;Name=YPC_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05100;old_locus_tag=YPC_1108 NC_017265.1 Protein Homology CDS 1112005 1113723 . - 0 ID=cds976;Parent=gene1017;Dbxref=Genbank:WP_002212156.1;Name=WP_002212156.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_002212156.1;transl_table=11 NC_017265.1 RefSeq gene 1113827 1114534 . - . ID=gene1018;Name=YPC_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05105;old_locus_tag=YPC_1109 NC_017265.1 Protein Homology CDS 1113827 1114534 . - 0 ID=cds977;Parent=gene1018;Dbxref=Genbank:WP_002212157.1;Name=WP_002212157.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_002212157.1;transl_table=11 NC_017265.1 RefSeq gene 1114531 1114938 . - . ID=gene1019;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YPC_RS05110;old_locus_tag=YPC_1110 NC_017265.1 Protein Homology CDS 1114531 1114938 . - 0 ID=cds978;Parent=gene1019;Dbxref=Genbank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_002212158.1;transl_table=11 NC_017265.1 RefSeq gene 1115056 1115871 . - . ID=gene1020;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=YPC_RS05115;old_locus_tag=YPC_1111 NC_017265.1 Protein Homology CDS 1115056 1115871 . - 0 ID=cds979;Parent=gene1020;Dbxref=Genbank:WP_002212159.1;Name=WP_002212159.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_002212159.1;transl_table=11 NC_017265.1 RefSeq gene 1115935 1116588 . - . ID=gene1021;Name=YPC_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05120;old_locus_tag=YPC_1112 NC_017265.1 Protein Homology CDS 1115935 1116588 . - 0 ID=cds980;Parent=gene1021;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11 NC_017265.1 RefSeq gene 1116581 1117612 . - . ID=gene1022;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=YPC_RS05125;old_locus_tag=YPC_1113 NC_017265.1 Protein Homology CDS 1116581 1117612 . - 0 ID=cds981;Parent=gene1022;Dbxref=Genbank:WP_002212161.1;Name=WP_002212161.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002212161.1;transl_table=11 NC_017265.1 RefSeq gene 1117799 1118365 . + . ID=gene1023;Name=YPC_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05130;old_locus_tag=YPC_1114 NC_017265.1 Protein Homology CDS 1117799 1118365 . + 0 ID=cds982;Parent=gene1023;Dbxref=Genbank:WP_002220062.1;Name=WP_002220062.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1118531 1124148 . + . ID=id109;gbkey=repeat_region NC_017265.1 RefSeq gene 1118804 1120352 . + . ID=gene1024;Name=YPC_RS05140;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS05140;old_locus_tag=YPC_1116 NC_017265.1 RefSeq rRNA 1118804 1120352 . + . ID=rna39;Parent=gene1024;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq exon 1118804 1120352 . + . ID=id110;Parent=rna39;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq gene 1120486 1120561 . + . ID=gene1025;Name=YPC_RS05145;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS05145;old_locus_tag=YPC_1117 NC_017265.1 tRNAscan-SE tRNA 1120486 1120561 . + . ID=rna40;Parent=gene1025;anticodon=(pos:1120520..1120522);gbkey=tRNA;product=tRNA-Glu NC_017265.1 tRNAscan-SE exon 1120486 1120561 . + . ID=id111;Parent=rna40;anticodon=(pos:1120520..1120522);gbkey=tRNA;product=tRNA-Glu NC_017265.1 RefSeq gene 1120805 1123738 . + . ID=gene1026;Name=YPC_RS05150;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS05150;old_locus_tag=YPC_1118 NC_017265.1 RefSeq rRNA 1120805 1123738 . + . ID=rna41;Parent=gene1026;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq exon 1120805 1123738 . + . ID=id112;Parent=rna41;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq gene 1123830 1123945 . + . ID=gene1027;Name=YPC_RS05155;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS05155;old_locus_tag=YPC_1119 NC_017265.1 cmsearch rRNA 1123830 1123945 . + . ID=rna42;Parent=gene1027;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 1123830 1123945 . + . ID=id113;Parent=rna42;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 1124071 1124147 . + . ID=gene1028;Name=YPC_RS05160;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS05160;old_locus_tag=YPC_1120 NC_017265.1 tRNAscan-SE tRNA 1124071 1124147 . + . ID=rna43;Parent=gene1028;anticodon=(pos:1124105..1124107);gbkey=tRNA;product=tRNA-Asp NC_017265.1 tRNAscan-SE exon 1124071 1124147 . + . ID=id114;Parent=rna43;anticodon=(pos:1124105..1124107);gbkey=tRNA;product=tRNA-Asp NC_017265.1 RefSeq gene 1124506 1125309 . + . ID=gene1029;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YPC_RS05165;old_locus_tag=YPC_1121 NC_017265.1 Protein Homology CDS 1124506 1125309 . + 0 ID=cds983;Parent=gene1029;Dbxref=Genbank:WP_002210693.1;Name=WP_002210693.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase B;protein_id=WP_002210693.1;transl_table=11 NC_017265.1 RefSeq gene 1125362 1125808 . + . ID=gene1030;Name=YPC_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05170;old_locus_tag=YPC_1122 NC_017265.1 Protein Homology CDS 1125362 1125808 . + 0 ID=cds984;Parent=gene1030;Dbxref=Genbank:WP_002210694.1;Name=WP_002210694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210694.1;transl_table=11 NC_017265.1 RefSeq gene 1126190 1126951 . + . ID=gene1031;Name=YPC_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05175;old_locus_tag=YPC_1123 NC_017265.1 Protein Homology CDS 1126190 1126951 . + 0 ID=cds985;Parent=gene1031;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11 NC_017265.1 RefSeq gene 1126993 1128381 . - . ID=gene1032;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=YPC_RS05180;old_locus_tag=YPC_1124 NC_017265.1 Protein Homology CDS 1126993 1128381 . - 0 ID=cds986;Parent=gene1032;Dbxref=Genbank:WP_002228041.1;Name=WP_002228041.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_002228041.1;transl_table=11 NC_017265.1 RefSeq gene 1128453 1129208 . - . ID=gene1033;Name=YPC_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05185;old_locus_tag=YPC_1125 NC_017265.1 Protein Homology CDS 1128453 1129208 . - 0 ID=cds987;Parent=gene1033;Dbxref=Genbank:WP_002210697.1;Name=WP_002210697.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_002210697.1;transl_table=11 NC_017265.1 RefSeq gene 1129253 1129972 . + . ID=gene1034;Name=YPC_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05190;old_locus_tag=YPC_1126 NC_017265.1 Protein Homology CDS 1129253 1129972 . + 0 ID=cds988;Parent=gene1034;Dbxref=Genbank:WP_002210698.1;Name=WP_002210698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210698.1;transl_table=11 NC_017265.1 RefSeq gene 1130027 1130491 . - . ID=gene1035;Name=YPC_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05195;old_locus_tag=YPC_1127 NC_017265.1 Protein Homology CDS 1130027 1130491 . - 0 ID=cds989;Parent=gene1035;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NC_017265.1 RefSeq gene 1130561 1131325 . + . ID=gene1036;Name=YPC_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05200;old_locus_tag=YPC_1128 NC_017265.1 Protein Homology CDS 1130561 1131325 . + 0 ID=cds990;Parent=gene1036;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NC_017265.1 RefSeq gene 1131438 1131514 . + . ID=gene1037;Name=YPC_RS05205;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS05205;old_locus_tag=YPC_1129 NC_017265.1 tRNAscan-SE tRNA 1131438 1131514 . + . ID=rna44;Parent=gene1037;anticodon=(pos:1131472..1131474);gbkey=tRNA;product=tRNA-Asp NC_017265.1 tRNAscan-SE exon 1131438 1131514 . + . ID=id115;Parent=rna44;anticodon=(pos:1131472..1131474);gbkey=tRNA;product=tRNA-Asp NC_017265.1 RefSeq gene 1131571 1133055 . - . ID=gene1038;Name=YPC_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05210;old_locus_tag=YPC_1130 NC_017265.1 Protein Homology CDS 1131571 1133055 . - 0 ID=cds991;Parent=gene1038;Dbxref=Genbank:WP_002210701.1;Name=WP_002210701.1;gbkey=CDS;product=permease;protein_id=WP_002210701.1;transl_table=11 NC_017265.1 RefSeq gene 1133279 1133401 . + . ID=gene1039;Name=YPC_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05215;old_locus_tag=YPC_1131 NC_017265.1 Protein Homology CDS 1133279 1133401 . + 0 ID=cds992;Parent=gene1039;Dbxref=Genbank:WP_002210702.1;Name=WP_002210702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210702.1;transl_table=11 NC_017265.1 RefSeq gene 1133394 1133627 . + . ID=gene1040;Name=YPC_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05220;old_locus_tag=YPC_1132 NC_017265.1 Protein Homology CDS 1133394 1133627 . + 0 ID=cds993;Parent=gene1040;Dbxref=Genbank:WP_002210703.1;Name=WP_002210703.1;gbkey=CDS;product=polysaccharide deacetylase;protein_id=WP_002210703.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1133609 1135567 . + . ID=id116;gbkey=repeat_region NC_017265.1 RefSeq gene 1133678 1134457 . - . ID=gene1041;Name=YPC_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05225;old_locus_tag=YPC_1133 NC_017265.1 Protein Homology CDS 1133678 1134457 . - 0 ID=cds994;Parent=gene1041;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 1134457 1135479 . - . ID=gene1042;Name=YPC_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05230;old_locus_tag=YPC_1134 NC_017265.1 Protein Homology CDS 1134457 1135479 . - 0 ID=cds995;Parent=gene1042;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 1135493 1135669 . - . ID=gene1043;Name=YPC_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05235;old_locus_tag=YPC_1135 NC_017265.1 Protein Homology CDS 1135493 1135669 . - 0 ID=cds996;Parent=gene1043;Dbxref=Genbank:WP_002210704.1;Name=WP_002210704.1;gbkey=CDS;product=integrase;protein_id=WP_002210704.1;transl_table=11 NC_017265.1 RefSeq gene 1136084 1136401 . + . ID=gene1044;Name=YPC_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05240;old_locus_tag=YPC_1136 NC_017265.1 Protein Homology CDS 1136084 1136401 . + 0 ID=cds997;Parent=gene1044;Dbxref=Genbank:WP_002215951.1;Name=WP_002215951.1;gbkey=CDS;product=addiction module protein;protein_id=WP_002215951.1;transl_table=11 NC_017265.1 RefSeq gene 1136407 1136721 . + . ID=gene1045;Name=YPC_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05245;old_locus_tag=YPC_1137 NC_017265.1 Protein Homology CDS 1136407 1136721 . + 0 ID=cds998;Parent=gene1045;Dbxref=Genbank:WP_002210705.1;Name=WP_002210705.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210705.1;transl_table=11 NC_017265.1 RefSeq gene 1137070 1138158 . - . ID=gene1046;Name=YPC_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05250;old_locus_tag=YPC_1140 NC_017265.1 Protein Homology CDS 1137070 1138158 . - 0 ID=cds999;Parent=gene1046;Dbxref=Genbank:WP_002210707.1;Name=WP_002210707.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210707.1;transl_table=11 NC_017265.1 RefSeq gene 1138155 1139114 . - . ID=gene1047;Name=YPC_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05255;old_locus_tag=YPC_1141 NC_017265.1 Protein Homology CDS 1138155 1139114 . - 0 ID=cds1000;Parent=gene1047;Dbxref=Genbank:WP_002215950.1;Name=WP_002215950.1;gbkey=CDS;product=DNA primase;protein_id=WP_002215950.1;transl_table=11 NC_017265.1 RefSeq gene 1139107 1139649 . - . ID=gene1048;Name=YPC_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05260;old_locus_tag=YPC_1142 NC_017265.1 Protein Homology CDS 1139107 1139649 . - 0 ID=cds1001;Parent=gene1048;Dbxref=Genbank:WP_002215949.1;Name=WP_002215949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215949.1;transl_table=11 NC_017265.1 RefSeq gene 1139649 1139849 . - . ID=gene1049;Name=YPC_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05265;old_locus_tag=YPC_1143 NC_017265.1 Protein Homology CDS 1139649 1139849 . - 0 ID=cds1002;Parent=gene1049;Dbxref=Genbank:WP_002210709.1;Name=WP_002210709.1;gbkey=CDS;product=dipicolinate synthase;protein_id=WP_002210709.1;transl_table=11 NC_017265.1 RefSeq gene 1139842 1140729 . - . ID=gene1050;Name=YPC_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05270;old_locus_tag=YPC_1144 NC_017265.1 Protein Homology CDS 1139842 1140729 . - 0 ID=cds1003;Parent=gene1050;Dbxref=Genbank:WP_002210710.1;Name=WP_002210710.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210710.1;transl_table=11 NC_017265.1 RefSeq gene 1140751 1141074 . - . ID=gene1051;Name=YPC_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05275;old_locus_tag=YPC_1145 NC_017265.1 Protein Homology CDS 1140751 1141074 . - 0 ID=cds1004;Parent=gene1051;Dbxref=Genbank:WP_011566205.1;Name=WP_011566205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011566205.1;transl_table=11 NC_017265.1 RefSeq gene 1141133 1141306 . - . ID=gene1052;Name=YPC_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05280 NC_017265.1 Protein Homology CDS 1141133 1141306 . - 0 ID=cds1005;Parent=gene1052;Dbxref=Genbank:WP_002215947.1;Name=WP_002215947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215947.1;transl_table=11 NC_017265.1 RefSeq gene 1141537 1141764 . + . ID=gene1053;Name=YPC_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05285;old_locus_tag=YPC_1146 NC_017265.1 Protein Homology CDS 1141537 1141764 . + 0 ID=cds1006;Parent=gene1053;Dbxref=Genbank:WP_002215946.1;Name=WP_002215946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215946.1;transl_table=11 NC_017265.1 RefSeq gene 1141926 1143596 . - . ID=gene1054;Name=YPC_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05290;old_locus_tag=YPC_1147 NC_017265.1 Protein Homology CDS 1141926 1143596 . - 0 ID=cds1007;Parent=gene1054;Dbxref=Genbank:WP_002215945.1;Name=WP_002215945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215945.1;transl_table=11 NC_017265.1 RefSeq gene 1143647 1144735 . - . ID=gene1055;Name=YPC_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05295;old_locus_tag=YPC_1148 NC_017265.1 Protein Homology CDS 1143647 1144735 . - 0 ID=cds1008;Parent=gene1055;Dbxref=Genbank:WP_002210712.1;Name=WP_002210712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210712.1;transl_table=11 NC_017265.1 RefSeq gene 1144814 1146013 . - . ID=gene1056;Name=YPC_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05300;old_locus_tag=YPC_1149 NC_017265.1 Protein Homology CDS 1144814 1146013 . - 0 ID=cds1009;Parent=gene1056;Dbxref=Genbank:WP_002210713.1;Name=WP_002210713.1;gbkey=CDS;product=integrase;protein_id=WP_002210713.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1146125 1146847 . + . ID=id117;gbkey=repeat_region NC_017265.1 RefSeq gene 1146237 1146695 . - . ID=gene1057;Name=YPC_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05305;old_locus_tag=YPC_1150 NC_017265.1 Protein Homology CDS 1146237 1146695 . - 0 ID=cds1010;Parent=gene1057;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 1146685 1146885 . - . ID=gene1058;Name=YPC_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05310 NC_017265.1 Protein Homology CDS 1146685 1146885 . - 0 ID=cds1011;Parent=gene1058;Dbxref=Genbank:WP_002215944.1;Name=WP_002215944.1;gbkey=CDS;product=invasin;protein_id=WP_002215944.1;transl_table=11 NC_017265.1 RefSeq gene 1147330 1147812 . - . ID=gene1059;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YPC_RS05315;old_locus_tag=YPC_1154 NC_017265.1 Protein Homology CDS 1147330 1147812 . - 0 ID=cds1012;Parent=gene1059;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11 NC_017265.1 RefSeq gene 1147973 1148407 . + . ID=gene1060;Name=YPC_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05320;old_locus_tag=YPC_1155 NC_017265.1 Protein Homology CDS 1147973 1148407 . + 0 ID=cds1013;Parent=gene1060;Dbxref=Genbank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210715.1;transl_table=11 NC_017265.1 RefSeq gene 1148400 1148684 . + . ID=gene1061;Name=YPC_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05325;old_locus_tag=YPC_1156 NC_017265.1 Protein Homology CDS 1148400 1148684 . + 0 ID=cds1014;Parent=gene1061;Dbxref=Genbank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;product=protein RnfH;protein_id=WP_002210716.1;transl_table=11 NC_017265.1 RefSeq gene 1148834 1149175 . - . ID=gene1062;Name=YPC_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05330;old_locus_tag=YPC_1157 NC_017265.1 Protein Homology CDS 1148834 1149175 . - 0 ID=cds1015;Parent=gene1062;Dbxref=Genbank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_002210717.1;transl_table=11 NC_017265.1 RefSeq gene 1149289 1150950 . - . ID=gene1063;Name=YPC_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05335;old_locus_tag=YPC_1158 NC_017265.1 Protein Homology CDS 1149289 1150950 . - 0 ID=cds1016;Parent=gene1063;Dbxref=Genbank:WP_015683564.1;Name=WP_015683564.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_015683564.1;transl_table=11 NC_017265.1 RefSeq gene 1151037 1151918 . - . ID=gene1064;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=YPC_RS05340;old_locus_tag=YPC_1159 NC_017265.1 Protein Homology CDS 1151037 1151918 . - 0 ID=cds1017;Parent=gene1064;Dbxref=Genbank:WP_002210719.1;Name=WP_002210719.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_002210719.1;transl_table=11 NC_017265.1 RefSeq gene 1152042 1152620 . + . ID=gene1065;Name=YPC_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05345;old_locus_tag=YPC_1160 NC_017265.1 Protein Homology CDS 1152042 1152620 . + 0 ID=cds1018;Parent=gene1065;Dbxref=Genbank:WP_002210720.1;Name=WP_002210720.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002210720.1;transl_table=11 NC_017265.1 RefSeq gene 1152728 1154008 . - . ID=gene1066;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=YPC_RS05350;old_locus_tag=YPC_1161 NC_017265.1 Protein Homology CDS 1152728 1154008 . - 0 ID=cds1019;Parent=gene1066;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11 NC_017265.1 RefSeq gene 1154718 1155107 . + . ID=gene1067;Name=YPC_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05355 NC_017265.1 Protein Homology CDS 1154718 1155107 . + 0 ID=cds1020;Parent=gene1067;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11 NC_017265.1 RefSeq gene 1155101 1155448 . + . ID=gene1068;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YPC_RS05360;old_locus_tag=YPC_1163 NC_017265.1 Protein Homology CDS 1155101 1155448 . + 0 ID=cds1021;Parent=gene1068;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11 NC_017265.1 RefSeq gene 1155449 1157215 . + . ID=gene1069;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YPC_RS05365;old_locus_tag=YPC_1164 NC_017265.1 Protein Homology CDS 1155449 1157215 . + 0 ID=cds1022;Parent=gene1069;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NC_017265.1 RefSeq gene 1157265 1157981 . + . ID=gene1070;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YPC_RS05370;old_locus_tag=YPC_1165 NC_017265.1 Protein Homology CDS 1157265 1157981 . + 0 ID=cds1023;Parent=gene1070;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NC_017265.1 RefSeq gene 1158337 1161144 . + . ID=gene1071;Name=YPC_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05375;old_locus_tag=YPC_1166 NC_017265.1 Protein Homology CDS 1158337 1161144 . + 0 ID=cds1024;Parent=gene1071;Dbxref=Genbank:WP_002210726.1;Name=WP_002210726.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=WP_002210726.1;transl_table=11 NC_017265.1 RefSeq gene 1161174 1162397 . + . ID=gene1072;Name=YPC_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05380;old_locus_tag=YPC_1167 NC_017265.1 Protein Homology CDS 1161174 1162397 . + 0 ID=cds1025;Parent=gene1072;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NC_017265.1 RefSeq gene 1162510 1163676 . + . ID=gene1073;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YPC_RS05385;old_locus_tag=YPC_1168 NC_017265.1 Protein Homology CDS 1162510 1163676 . + 0 ID=cds1026;Parent=gene1073;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NC_017265.1 RefSeq gene 1163676 1164548 . + . ID=gene1074;Name=YPC_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05390;old_locus_tag=YPC_1169 NC_017265.1 Protein Homology CDS 1163676 1164548 . + 0 ID=cds1027;Parent=gene1074;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NC_017265.1 RefSeq gene 1165315 1166883 . + . ID=gene1075;Name=YPC_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05395;old_locus_tag=YPC_1170 NC_017265.1 Protein Homology CDS 1165315 1166883 . + 0 ID=cds1028;Parent=gene1075;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NC_017265.1 RefSeq gene 1166898 1168037 . + . ID=gene1076;Name=YPC_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05400;old_locus_tag=YPC_1171 NC_017265.1 Protein Homology CDS 1166898 1168037 . + 0 ID=cds1029;Parent=gene1076;Dbxref=Genbank:WP_002210731.1;Name=WP_002210731.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NC_017265.1 RefSeq gene 1168050 1168184 . + . ID=gene1077;Name=YPC_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05405;old_locus_tag=YPC_1172 NC_017265.1 Protein Homology CDS 1168050 1168184 . + 0 ID=cds1030;Parent=gene1077;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11 NC_017265.1 RefSeq gene 1168174 1168461 . + . ID=gene1078;Name=YPC_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05410;old_locus_tag=YPC_1173 NC_017265.1 Protein Homology CDS 1168174 1168461 . + 0 ID=cds1031;Parent=gene1078;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11 NC_017265.1 RefSeq gene 1168593 1168994 . + . ID=gene1079;Name=YPC_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05415;old_locus_tag=YPC_1174 NC_017265.1 Protein Homology CDS 1168593 1168994 . + 0 ID=cds1032;Parent=gene1079;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11 NC_017265.1 RefSeq gene 1168994 1169680 . + . ID=gene1080;Name=YPC_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05420;old_locus_tag=YPC_1175 NC_017265.1 Protein Homology CDS 1168994 1169680 . + 0 ID=cds1033;Parent=gene1080;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11 NC_017265.1 RefSeq gene 1169693 1170121 . + . ID=gene1081;Name=YPC_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05425;old_locus_tag=YPC_1176 NC_017265.1 Protein Homology CDS 1169693 1170121 . + 0 ID=cds1034;Parent=gene1081;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11 NC_017265.1 RefSeq gene 1170233 1171399 . + . ID=gene1082;Name=YPC_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05430;old_locus_tag=YPC_1177 NC_017265.1 Protein Homology CDS 1170233 1171399 . + 0 ID=cds1035;Parent=gene1082;Dbxref=Genbank:WP_002210737.1;Name=WP_002210737.1;gbkey=CDS;product=cell envelope integrity/translocation protein TolA;protein_id=WP_002210737.1;transl_table=11 NC_017265.1 RefSeq gene 1171519 1172811 . + . ID=gene1083;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YPC_RS05435;old_locus_tag=YPC_1178 NC_017265.1 Protein Homology CDS 1171519 1172811 . + 0 ID=cds1036;Parent=gene1083;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11 NC_017265.1 RefSeq gene 1172862 1173368 . + . ID=gene1084;Name=YPC_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05440;old_locus_tag=YPC_1179 NC_017265.1 Protein Homology CDS 1172862 1173368 . + 0 ID=cds1037;Parent=gene1084;Dbxref=Genbank:WP_002210739.1;Name=WP_002210739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210739.1;transl_table=11 NC_017265.1 RefSeq gene 1173378 1174187 . + . ID=gene1085;Name=YPC_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05445;old_locus_tag=YPC_1180 NC_017265.1 Protein Homology CDS 1173378 1174187 . + 0 ID=cds1038;Parent=gene1085;Dbxref=Genbank:WP_002220051.1;Name=WP_002220051.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=WP_002220051.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1174378 1174641 . + . ID=id118;gbkey=repeat_region NC_017265.1 RefSeq gene 1174378 1174453 . + . ID=gene1086;Name=YPC_RS05450;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS05450;old_locus_tag=YPC_1181 NC_017265.1 tRNAscan-SE tRNA 1174378 1174453 . + . ID=rna45;Parent=gene1086;anticodon=(pos:1174411..1174413);gbkey=tRNA;product=tRNA-Lys NC_017265.1 tRNAscan-SE exon 1174378 1174453 . + . ID=id119;Parent=rna45;anticodon=(pos:1174411..1174413);gbkey=tRNA;product=tRNA-Lys NC_017265.1 RefSeq gene 1174481 1174556 . + . ID=gene1087;Name=YPC_RS05455;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS05455;old_locus_tag=YPC_1182 NC_017265.1 tRNAscan-SE tRNA 1174481 1174556 . + . ID=rna46;Parent=gene1087;anticodon=(pos:1174514..1174516);gbkey=tRNA;product=tRNA-Lys NC_017265.1 tRNAscan-SE exon 1174481 1174556 . + . ID=id120;Parent=rna46;anticodon=(pos:1174514..1174516);gbkey=tRNA;product=tRNA-Lys NC_017265.1 RefSeq gene 1174704 1174946 . - . ID=gene1088;Name=YPC_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05460 NC_017265.1 Protein Homology CDS 1174704 1174946 . - 0 ID=cds1039;Parent=gene1088;Dbxref=Genbank:WP_002217022.1;Name=WP_002217022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217022.1;transl_table=11 NC_017265.1 RefSeq gene 1175023 1176084 . + . ID=gene1089;Name=YPC_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05465;old_locus_tag=YPC_1184 NC_017265.1 Protein Homology CDS 1175023 1176084 . + 0 ID=cds1040;Parent=gene1089;Dbxref=Genbank:WP_002210741.1;Name=WP_002210741.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002210741.1;transl_table=11 NC_017265.1 RefSeq gene 1176206 1176931 . + . ID=gene1090;Name=YPC_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05470;old_locus_tag=YPC_1185 NC_017265.1 Protein Homology CDS 1176206 1176931 . + 0 ID=cds1041;Parent=gene1090;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NC_017265.1 RefSeq gene 1177046 1177984 . - . ID=gene1091;Name=YPC_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05475;old_locus_tag=YPC_1186 NC_017265.1 Protein Homology CDS 1177046 1177984 . - 0 ID=cds1042;Parent=gene1091;Dbxref=Genbank:WP_002210743.1;Name=WP_002210743.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_002210743.1;transl_table=11 NC_017265.1 RefSeq gene 1178433 1179485 . + . ID=gene1092;Name=YPC_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05480;old_locus_tag=YPC_1187 NC_017265.1 Protein Homology CDS 1178433 1179485 . + 0 ID=cds1043;Parent=gene1092;Dbxref=Genbank:WP_002223549.1;Name=WP_002223549.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002223549.1;transl_table=11 NC_017265.1 RefSeq gene 1179667 1180419 . - . ID=gene1093;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YPC_RS05485;old_locus_tag=YPC_1188 NC_017265.1 Protein Homology CDS 1179667 1180419 . - 0 ID=cds1044;Parent=gene1093;Dbxref=Genbank:WP_015683565.1;Name=WP_015683565.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_015683565.1;transl_table=11 NC_017265.1 RefSeq gene 1180766 1181101 . - . ID=gene1094;Name=YPC_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05490;old_locus_tag=YPC_1189 NC_017265.1 Protein Homology CDS 1180766 1181101 . - 0 ID=cds1045;Parent=gene1094;Dbxref=Genbank:WP_002210747.1;Name=WP_002210747.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_002210747.1;transl_table=11 NC_017265.1 RefSeq gene 1181394 1182290 . - . ID=gene1095;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YPC_RS05495;old_locus_tag=YPC_1190 NC_017265.1 Protein Homology CDS 1181394 1182290 . - 0 ID=cds1046;Parent=gene1095;Dbxref=Genbank:WP_002216812.1;Name=WP_002216812.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_002216812.1;transl_table=11 NC_017265.1 RefSeq gene 1182311 1182463 . - . ID=gene1096;Name=YPC_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05500;old_locus_tag=YPC_1191 NC_017265.1 Protein Homology CDS 1182311 1182463 . - 0 ID=cds1047;Parent=gene1096;Dbxref=Genbank:WP_002216814.1;Name=WP_002216814.1;gbkey=CDS;product=aldose 1-epimerase;protein_id=WP_002216814.1;transl_table=11 NC_017265.1 RefSeq gene 1182457 1183608 . - . ID=gene1097;Name=YPC_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05505;old_locus_tag=YPC_1192 NC_017265.1 Protein Homology CDS 1182457 1183608 . - 0 ID=cds1048;Parent=gene1097;Dbxref=Genbank:WP_002210748.1;Name=WP_002210748.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NC_017265.1 RefSeq gene 1183605 1184657 . - . ID=gene1098;Name=YPC_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05510;old_locus_tag=YPC_1193 NC_017265.1 Protein Homology CDS 1183605 1184657 . - 0 ID=cds1049;Parent=gene1098;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NC_017265.1 RefSeq gene 1184667 1185683 . - . ID=gene1099;Name=YPC_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05515;old_locus_tag=YPC_1194 NC_017265.1 Protein Homology CDS 1184667 1185683 . - 0 ID=cds1050;Parent=gene1099;Dbxref=Genbank:WP_002210750.1;Name=WP_002210750.1;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=WP_002210750.1;transl_table=11 NC_017265.1 RefSeq gene 1186043 1186861 . - . ID=gene1100;Name=YPC_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05520;old_locus_tag=YPC_1195 NC_017265.1 Protein Homology CDS 1186043 1186861 . - 0 ID=cds1051;Parent=gene1100;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11 NC_017265.1 RefSeq gene 1186916 1187044 . - . ID=gene1101;Name=YPC_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05525;old_locus_tag=YPC_1196 NC_017265.1 Protein Homology CDS 1186916 1187044 . - 0 ID=cds1052;Parent=gene1101;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11 NC_017265.1 RefSeq gene 1187078 1188568 . - . ID=gene1102;Name=YPC_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05530;old_locus_tag=YPC_1197 NC_017265.1 Protein Homology CDS 1187078 1188568 . - 0 ID=cds1053;Parent=gene1102;Dbxref=Genbank:WP_002210753.1;Name=WP_002210753.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_002210753.1;transl_table=11 NC_017265.1 RefSeq gene 1188678 1189469 . - . ID=gene1103;Name=YPC_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05535;old_locus_tag=YPC_1198 NC_017265.1 Protein Homology CDS 1188678 1189469 . - 0 ID=cds1054;Parent=gene1103;Dbxref=Genbank:WP_002210754.1;Name=WP_002210754.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_002210754.1;transl_table=11 NC_017265.1 RefSeq gene 1189769 1189921 . + . ID=gene1104;Name=YPC_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05540;old_locus_tag=YPC_1200 NC_017265.1 Protein Homology CDS 1189769 1189921 . + 0 ID=cds1055;Parent=gene1104;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11 NC_017265.1 RefSeq gene 1190156 1190935 . + . ID=gene1105;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YPC_RS05545;old_locus_tag=YPC_1201 NC_017265.1 Protein Homology CDS 1190156 1190935 . + 0 ID=cds1056;Parent=gene1105;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NC_017265.1 RefSeq gene 1190935 1191630 . + . ID=gene1106;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YPC_RS05550;old_locus_tag=YPC_1202 NC_017265.1 Protein Homology CDS 1190935 1191630 . + 0 ID=cds1057;Parent=gene1106;Dbxref=Genbank:WP_002210757.1;Name=WP_002210757.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_002210757.1;transl_table=11 NC_017265.1 RefSeq gene 1191624 1192703 . + . ID=gene1107;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YPC_RS05555;old_locus_tag=YPC_1203 NC_017265.1 Protein Homology CDS 1191624 1192703 . + 0 ID=cds1058;Parent=gene1107;Dbxref=Genbank:WP_002210758.1;Name=WP_002210758.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_002210758.1;transl_table=11 NC_017265.1 RefSeq gene 1192759 1193580 . - . ID=gene1108;Name=YPC_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05560;old_locus_tag=YPC_1204 NC_017265.1 Protein Homology CDS 1192759 1193580 . - 0 ID=cds1059;Parent=gene1108;Dbxref=Genbank:WP_002210759.1;Name=WP_002210759.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_002210759.1;transl_table=11 NC_017265.1 RefSeq gene 1193871 1194875 . + . ID=gene1109;Name=YPC_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05565;old_locus_tag=YPC_1205 NC_017265.1 Protein Homology CDS 1193871 1194875 . + 0 ID=cds1060;Parent=gene1109;Dbxref=Genbank:WP_002210760.1;Name=WP_002210760.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_002210760.1;transl_table=11 NC_017265.1 RefSeq gene 1195060 1196340 . - . ID=gene1110;Name=YPC_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05570;old_locus_tag=YPC_1206 NC_017265.1 Protein Homology CDS 1195060 1196340 . - 0 ID=cds1061;Parent=gene1110;Dbxref=Genbank:WP_002220188.1;Name=WP_002220188.1;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_002220188.1;transl_table=11 NC_017265.1 RefSeq gene 1196439 1197476 . + . ID=gene1111;Name=YPC_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05575;old_locus_tag=YPC_1207 NC_017265.1 Protein Homology CDS 1196439 1197476 . + 0 ID=cds1062;Parent=gene1111;Dbxref=Genbank:WP_002210762.1;Name=WP_002210762.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_002210762.1;transl_table=11 NC_017265.1 RefSeq gene 1197476 1198627 . + . ID=gene1112;Name=YPC_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05580;old_locus_tag=YPC_1208 NC_017265.1 Protein Homology CDS 1197476 1198627 . + 0 ID=cds1063;Parent=gene1112;Dbxref=Genbank:WP_002210763.1;Name=WP_002210763.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_002210763.1;transl_table=11 NC_017265.1 RefSeq gene 1198611 1199414 . + . ID=gene1113;Name=YPC_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05585;old_locus_tag=YPC_1209 NC_017265.1 Protein Homology CDS 1198611 1199414 . + 0 ID=cds1064;Parent=gene1113;Dbxref=Genbank:WP_002210764.1;Name=WP_002210764.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_002210764.1;transl_table=11 NC_017265.1 RefSeq gene 1199407 1200129 . + . ID=gene1114;Name=YPC_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05590;old_locus_tag=YPC_1210 NC_017265.1 Protein Homology CDS 1199407 1200129 . + 0 ID=cds1065;Parent=gene1114;Dbxref=Genbank:WP_002216554.1;Name=WP_002216554.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002216554.1;transl_table=11 NC_017265.1 RefSeq gene 1200281 1200991 . - . ID=gene1115;Name=YPC_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05595;old_locus_tag=YPC_1211 NC_017265.1 Protein Homology CDS 1200281 1200991 . - 0 ID=cds1066;Parent=gene1115;Dbxref=Genbank:WP_002210766.1;Name=WP_002210766.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210766.1;transl_table=11 NC_017265.1 RefSeq gene 1202081 1204096 . + . ID=gene1116;Name=YPC_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05600;old_locus_tag=YPC_1212 NC_017265.1 Protein Homology CDS 1202081 1204096 . + 0 ID=cds1067;Parent=gene1116;Dbxref=Genbank:WP_002210767.1;Name=WP_002210767.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_002210767.1;transl_table=11 NC_017265.1 RefSeq gene 1204388 1204633 . + . ID=gene1117;Name=YPC_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05605;old_locus_tag=YPC_1214 NC_017265.1 Protein Homology CDS 1204388 1204633 . + 0 ID=cds1068;Parent=gene1117;Dbxref=Genbank:WP_002210768.1;Name=WP_002210768.1;gbkey=CDS;product=transporter;protein_id=WP_002210768.1;transl_table=11 NC_017265.1 RefSeq gene 1204764 1205687 . - . ID=gene1118;Name=YPC_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05610;old_locus_tag=YPC_1215 NC_017265.1 Protein Homology CDS 1204764 1205687 . - 0 ID=cds1069;Parent=gene1118;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11 NC_017265.1 RefSeq gene 1205821 1205967 . - . ID=gene1119;Name=YPC_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05615 NC_017265.1 Protein Homology CDS 1205821 1205967 . - 0 ID=cds1070;Parent=gene1119;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11 NC_017265.1 RefSeq gene 1206219 1207199 . + . ID=gene1120;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YPC_RS05620;old_locus_tag=YPC_1216 NC_017265.1 Protein Homology CDS 1206219 1207199 . + 0 ID=cds1071;Parent=gene1120;Dbxref=Genbank:WP_015683566.1;Name=WP_015683566.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_015683566.1;transl_table=11 NC_017265.1 RefSeq gene 1207300 1207779 . + . ID=gene1121;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YPC_RS05625;old_locus_tag=YPC_1217 NC_017265.1 Protein Homology CDS 1207300 1207779 . + 0 ID=cds1072;Parent=gene1121;Dbxref=Genbank:WP_002210772.1;Name=WP_002210772.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_002210772.1;transl_table=11 NC_017265.1 RefSeq gene 1207776 1208021 . + . ID=gene1122;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YPC_RS05630;old_locus_tag=YPC_1218 NC_017265.1 Protein Homology CDS 1207776 1208021 . + 0 ID=cds1073;Parent=gene1122;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11 NC_017265.1 RefSeq gene 1208024 1208476 . + . ID=gene1123;Name=YPC_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05635;old_locus_tag=YPC_1219 NC_017265.1 Protein Homology CDS 1208024 1208476 . + 0 ID=cds1074;Parent=gene1123;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11 NC_017265.1 RefSeq gene 1208619 1209329 . + . ID=gene1124;Name=YPC_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05640;old_locus_tag=YPC_1220 NC_017265.1 Protein Homology CDS 1208619 1209329 . + 0 ID=cds1075;Parent=gene1124;Dbxref=Genbank:WP_002210775.1;Name=WP_002210775.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210775.1;transl_table=11 NC_017265.1 RefSeq gene 1209404 1209574 . + . ID=gene1125;Name=YPC_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05645 NC_017265.1 Protein Homology CDS 1209404 1209574 . + 0 ID=cds1076;Parent=gene1125;Dbxref=Genbank:WP_025470755.1;Name=WP_025470755.1;gbkey=CDS;product=transposase;protein_id=WP_025470755.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1209411 1210134 . + . ID=id121;gbkey=repeat_region NC_017265.1 RefSeq gene 1209564 1210022 . + . ID=gene1126;Name=YPC_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05650;old_locus_tag=YPC_1223 NC_017265.1 Protein Homology CDS 1209564 1210022 . + 0 ID=cds1077;Parent=gene1126;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 1210251 1211953 . - . ID=gene1127;Name=YPC_RS05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS05655;pseudo=true NC_017265.1 Protein Homology CDS 1210251 1211953 . - 0 ID=cds1078;Parent=gene1127;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=choline dehydrogenase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1211976 1213448 . - . ID=gene1128;Name=YPC_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05660;old_locus_tag=YPC_1226 NC_017265.1 Protein Homology CDS 1211976 1213448 . - 0 ID=cds1079;Parent=gene1128;Dbxref=Genbank:WP_002218281.1;Name=WP_002218281.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_002218281.1;transl_table=11 NC_017265.1 RefSeq gene 1213506 1214102 . - . ID=gene1129;Name=YPC_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05665;old_locus_tag=YPC_1227 NC_017265.1 Protein Homology CDS 1213506 1214102 . - 0 ID=cds1080;Parent=gene1129;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11 NC_017265.1 RefSeq gene 1214467 1216515 . + . ID=gene1130;Name=YPC_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05670;old_locus_tag=YPC_1228 NC_017265.1 Protein Homology CDS 1214467 1216515 . + 0 ID=cds1081;Parent=gene1130;Dbxref=Genbank:WP_002228035.1;Name=WP_002228035.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_002228035.1;transl_table=11 NC_017265.1 RefSeq gene 1216747 1217640 . + . ID=gene1131;Name=YPC_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05675;old_locus_tag=YPC_1230 NC_017265.1 Protein Homology CDS 1216747 1217640 . + 0 ID=cds1082;Parent=gene1131;Dbxref=Genbank:WP_002214199.1;Name=WP_002214199.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214199.1;transl_table=11 NC_017265.1 RefSeq gene 1217678 1218526 . - . ID=gene1132;Name=YPC_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05680;old_locus_tag=YPC_1231 NC_017265.1 Protein Homology CDS 1217678 1218526 . - 0 ID=cds1083;Parent=gene1132;Dbxref=Genbank:WP_002214197.1;Name=WP_002214197.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002214197.1;transl_table=11 NC_017265.1 RefSeq gene 1218872 1219735 . + . ID=gene1133;Name=YPC_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05685;old_locus_tag=YPC_1232 NC_017265.1 Protein Homology CDS 1218872 1219735 . + 0 ID=cds1084;Parent=gene1133;Dbxref=Genbank:WP_002214195.1;Name=WP_002214195.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_002214195.1;transl_table=11 NC_017265.1 RefSeq gene 1219874 1220518 . + . ID=gene1134;Name=YPC_RS05690;end_range=1220518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS05690;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 1219874 1220518 . + 0 ID=cds1085;Parent=gene1134;end_range=1220518,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 1220513 1221234 . + . ID=id122;gbkey=repeat_region NC_017265.1 RefSeq gene 1220664 1221122 . + . ID=gene1135;Name=YPC_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05695 NC_017265.1 Protein Homology CDS 1220664 1221122 . + 0 ID=cds1086;Parent=gene1135;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 1221223 1221840 . + . ID=gene1136;Name=YPC_RS05700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS05700;partial=true;pseudo=true;start_range=.,1221223 NC_017265.1 Protein Homology CDS 1221223 1221840 . + 0 ID=cds1087;Parent=gene1136;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;start_range=.,1221223;transl_table=11 NC_017265.1 RefSeq gene 1221928 1222401 . - . ID=gene1137;Name=YPC_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05705;old_locus_tag=YPC_1236 NC_017265.1 Protein Homology CDS 1221928 1222401 . - 0 ID=cds1088;Parent=gene1137;Dbxref=Genbank:WP_002220173.1;Name=WP_002220173.1;gbkey=CDS;product=zinc resistance protein;protein_id=WP_002220173.1;transl_table=11 NC_017265.1 RefSeq gene 1222759 1224573 . + . ID=gene1138;Name=YPC_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05710;old_locus_tag=YPC_1237 NC_017265.1 Protein Homology CDS 1222759 1224573 . + 0 ID=cds1089;Parent=gene1138;Dbxref=Genbank:WP_002220171.1;Name=WP_002220171.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_002220171.1;transl_table=11 NC_017265.1 RefSeq gene 1224560 1225924 . + . ID=gene1139;Name=YPC_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05715;old_locus_tag=YPC_1238 NC_017265.1 Protein Homology CDS 1224560 1225924 . + 0 ID=cds1090;Parent=gene1139;Dbxref=Genbank:WP_002220170.1;Name=WP_002220170.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_002220170.1;transl_table=11 NC_017265.1 RefSeq gene 1226272 1227381 . + . ID=gene1140;Name=YPC_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05720;old_locus_tag=YPC_1239 NC_017265.1 Protein Homology CDS 1226272 1227381 . + 0 ID=cds1091;Parent=gene1140;Dbxref=Genbank:WP_015683567.1;Name=WP_015683567.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_015683567.1;transl_table=11 NC_017265.1 RefSeq gene 1227382 1228293 . - . ID=gene1141;Name=YPC_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05725;old_locus_tag=YPC_1240 NC_017265.1 Protein Homology CDS 1227382 1228293 . - 0 ID=cds1092;Parent=gene1141;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11 NC_017265.1 RefSeq gene 1228848 1229075 . + . ID=gene1142;Name=YPC_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05730;old_locus_tag=YPC_1242 NC_017265.1 Protein Homology CDS 1228848 1229075 . + 0 ID=cds1093;Parent=gene1142;Dbxref=Genbank:WP_002220165.1;Name=WP_002220165.1;gbkey=CDS;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_002220165.1;transl_table=11 NC_017265.1 RefSeq gene 1229086 1229412 . + . ID=gene1143;Name=YPC_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05735;old_locus_tag=YPC_1243 NC_017265.1 Protein Homology CDS 1229086 1229412 . + 0 ID=cds1094;Parent=gene1143;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11 NC_017265.1 RefSeq gene 1229451 1230557 . - . ID=gene1144;Name=YPC_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05740;old_locus_tag=YPC_1244 NC_017265.1 Protein Homology CDS 1229451 1230557 . - 0 ID=cds1095;Parent=gene1144;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11 NC_017265.1 RefSeq gene 1230570 1231745 . - . ID=gene1145;Name=YPC_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05745;old_locus_tag=YPC_1245 NC_017265.1 Protein Homology CDS 1230570 1231745 . - 0 ID=cds1096;Parent=gene1145;Dbxref=Genbank:WP_002220159.1;Name=WP_002220159.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220159.1;transl_table=11 NC_017265.1 RefSeq gene 1231750 1233492 . - . ID=gene1146;Name=YPC_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05750;old_locus_tag=YPC_1246 NC_017265.1 Protein Homology CDS 1231750 1233492 . - 0 ID=cds1097;Parent=gene1146;Dbxref=Genbank:WP_015683568.1;Name=WP_015683568.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_015683568.1;transl_table=11 NC_017265.1 RefSeq gene 1233506 1234492 . - . ID=gene1147;Name=YPC_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05755;old_locus_tag=YPC_1247 NC_017265.1 Protein Homology CDS 1233506 1234492 . - 0 ID=cds1098;Parent=gene1147;Dbxref=Genbank:WP_002220156.1;Name=WP_002220156.1;gbkey=CDS;product=transporter;protein_id=WP_002220156.1;transl_table=11 NC_017265.1 RefSeq gene 1234544 1235254 . - . ID=gene1148;Name=YPC_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05760;old_locus_tag=YPC_1248 NC_017265.1 Protein Homology CDS 1234544 1235254 . - 0 ID=cds1099;Parent=gene1148;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NC_017265.1 RefSeq gene 1235645 1237000 . + . ID=gene1149;Name=YPC_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05765;old_locus_tag=YPC_1249 NC_017265.1 Protein Homology CDS 1235645 1237000 . + 0 ID=cds1100;Parent=gene1149;Dbxref=Genbank:WP_015683569.1;Name=WP_015683569.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_015683569.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1236007 1237062 . + . ID=id123;gbkey=repeat_region NC_017265.1 RefSeq gene 1237130 1237396 . + . ID=gene1150;Name=YPC_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05770;old_locus_tag=YPC_1250 NC_017265.1 Protein Homology CDS 1237130 1237396 . + 0 ID=cds1101;Parent=gene1150;Dbxref=Genbank:WP_002228622.1;Name=WP_002228622.1;gbkey=CDS;product=transposase;protein_id=WP_002228622.1;transl_table=11 NC_017265.1 RefSeq gene 1238214 1238408 . + . ID=gene1151;Name=YPC_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05775;old_locus_tag=YPC_1252 NC_017265.1 Protein Homology CDS 1238214 1238408 . + 0 ID=cds1102;Parent=gene1151;Dbxref=Genbank:WP_002228620.1;Name=WP_002228620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228620.1;transl_table=11 NC_017265.1 RefSeq gene 1238442 1238768 . + . ID=gene1152;Name=YPC_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05780 NC_017265.1 Protein Homology CDS 1238442 1238768 . + 0 ID=cds1103;Parent=gene1152;Dbxref=Genbank:WP_016256670.1;Name=WP_016256670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256670.1;transl_table=11 NC_017265.1 RefSeq gene 1238909 1239145 . + . ID=gene1153;Name=YPC_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22060;old_locus_tag=YPC_1255 NC_017265.1 Protein Homology CDS 1238909 1239145 . + 0 ID=cds1104;Parent=gene1153;Dbxref=Genbank:WP_002228617.1;Name=WP_002228617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228617.1;transl_table=11 NC_017265.1 RefSeq gene 1239229 1239543 . + . ID=gene1154;Name=YPC_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05790;old_locus_tag=YPC_1256 NC_017265.1 Protein Homology CDS 1239229 1239543 . + 0 ID=cds1105;Parent=gene1154;Dbxref=Genbank:WP_002223532.1;Name=WP_002223532.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223532.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1239644 1240963 . + . ID=id124;gbkey=repeat_region NC_017265.1 RefSeq gene 1239718 1240926 . + . ID=gene1155;Name=YPC_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05795;old_locus_tag=YPC_1258 NC_017265.1 Protein Homology CDS 1239718 1240926 . + 0 ID=cds1106;Parent=gene1155;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 1240938 1241216 . - . ID=gene1156;Name=YPC_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05800;old_locus_tag=YPC_1259 NC_017265.1 Protein Homology CDS 1240938 1241216 . - 0 ID=cds1107;Parent=gene1156;Dbxref=Genbank:WP_002209804.1;Name=WP_002209804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209804.1;transl_table=11 NC_017265.1 RefSeq gene 1241275 1241742 . - . ID=gene1157;Name=YPC_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05805;old_locus_tag=YPC_1260 NC_017265.1 Protein Homology CDS 1241275 1241742 . - 0 ID=cds1108;Parent=gene1157;Dbxref=Genbank:WP_002209803.1;Name=WP_002209803.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209803.1;transl_table=11 NC_017265.1 RefSeq gene 1242264 1243064 . + . ID=gene1158;Name=YPC_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05810;old_locus_tag=YPC_1261 NC_017265.1 Protein Homology CDS 1242264 1243064 . + 0 ID=cds1109;Parent=gene1158;Dbxref=Genbank:WP_002209801.1;Name=WP_002209801.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_002209801.1;transl_table=11 NC_017265.1 RefSeq gene 1243126 1243872 . - . ID=gene1159;Name=YPC_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05815;old_locus_tag=YPC_1262 NC_017265.1 Protein Homology CDS 1243126 1243872 . - 0 ID=cds1110;Parent=gene1159;Dbxref=Genbank:WP_002232352.1;Name=WP_002232352.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002232352.1;transl_table=11 NC_017265.1 RefSeq gene 1244382 1244753 . + . ID=gene1160;Name=YPC_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05820 NC_017265.1 Protein Homology CDS 1244382 1244753 . + 0 ID=cds1111;Parent=gene1160;Dbxref=Genbank:WP_002422129.1;Name=WP_002422129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002422129.1;transl_table=11 NC_017265.1 RefSeq gene 1245040 1245930 . - . ID=gene1161;Name=YPC_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05825;old_locus_tag=YPC_1265 NC_017265.1 Protein Homology CDS 1245040 1245930 . - 0 ID=cds1112;Parent=gene1161;Dbxref=Genbank:WP_002209799.1;Name=WP_002209799.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_002209799.1;transl_table=11 NC_017265.1 RefSeq gene 1246566 1247960 . - . ID=gene1162;Name=YPC_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05830;old_locus_tag=YPC_1267 NC_017265.1 Protein Homology CDS 1246566 1247960 . - 0 ID=cds1113;Parent=gene1162;Dbxref=Genbank:WP_002209798.1;Name=WP_002209798.1;gbkey=CDS;product=protease;protein_id=WP_002209798.1;transl_table=11 NC_017265.1 RefSeq gene 1248235 1248573 . - . ID=gene1163;Name=YPC_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05835;old_locus_tag=YPC_1268 NC_017265.1 Protein Homology CDS 1248235 1248573 . - 0 ID=cds1114;Parent=gene1163;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11 NC_017265.1 RefSeq gene 1248710 1249429 . - . ID=gene1164;Name=YPC_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05840;old_locus_tag=YPC_1269 NC_017265.1 Protein Homology CDS 1248710 1249429 . - 0 ID=cds1115;Parent=gene1164;Dbxref=Genbank:WP_002209796.1;Name=WP_002209796.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209796.1;transl_table=11 NC_017265.1 RefSeq gene 1249439 1250821 . - . ID=gene1165;Name=YPC_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05845;old_locus_tag=YPC_1270 NC_017265.1 Protein Homology CDS 1249439 1250821 . - 0 ID=cds1116;Parent=gene1165;Dbxref=Genbank:WP_032466694.1;Name=WP_032466694.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_032466694.1;transl_table=11 NC_017265.1 RefSeq gene 1250855 1252252 . - . ID=gene1166;Name=YPC_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05850;old_locus_tag=YPC_1271 NC_017265.1 Protein Homology CDS 1250855 1252252 . - 0 ID=cds1117;Parent=gene1166;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11 NC_017265.1 RefSeq gene 1252286 1255360 . - . ID=gene1167;Name=YPC_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05855 NC_017265.1 Protein Homology CDS 1252286 1255360 . - 0 ID=cds1118;Parent=gene1167;Dbxref=Genbank:WP_002209794.1;Name=WP_002209794.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_002209794.1;transl_table=11 NC_017265.1 RefSeq gene 1255357 1258515 . - . ID=gene1168;Name=YPC_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05860 NC_017265.1 Protein Homology CDS 1255357 1258515 . - 0 ID=cds1119;Parent=gene1168;Dbxref=Genbank:WP_002209793.1;Name=WP_002209793.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_002209793.1;transl_table=11 NC_017265.1 RefSeq gene 1258515 1259849 . - . ID=gene1169;Name=YPC_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05865;old_locus_tag=YPC_1274 NC_017265.1 Protein Homology CDS 1258515 1259849 . - 0 ID=cds1120;Parent=gene1169;Dbxref=Genbank:WP_002214676.1;Name=WP_002214676.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_002214676.1;transl_table=11 NC_017265.1 RefSeq gene 1260213 1261298 . - . ID=gene1170;Name=YPC_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05870;old_locus_tag=YPC_1275 NC_017265.1 Protein Homology CDS 1260213 1261298 . - 0 ID=cds1121;Parent=gene1170;Dbxref=Genbank:WP_002209791.1;Name=WP_002209791.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209791.1;transl_table=11 NC_017265.1 RefSeq gene 1261681 1263186 . - . ID=gene1171;Name=YPC_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05875;old_locus_tag=YPC_1276 NC_017265.1 Protein Homology CDS 1261681 1263186 . - 0 ID=cds1122;Parent=gene1171;Dbxref=Genbank:WP_002209790.1;Name=WP_002209790.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002209790.1;transl_table=11 NC_017265.1 RefSeq gene 1263368 1264657 . + . ID=gene1172;Name=YPC_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05880;old_locus_tag=YPC_1277 NC_017265.1 Protein Homology CDS 1263368 1264657 . + 0 ID=cds1123;Parent=gene1172;Dbxref=Genbank:WP_002209789.1;Name=WP_002209789.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_002209789.1;transl_table=11 NC_017265.1 RefSeq gene 1264710 1265738 . + . ID=gene1173;Name=YPC_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05885;old_locus_tag=YPC_1278 NC_017265.1 Protein Homology CDS 1264710 1265738 . + 0 ID=cds1124;Parent=gene1173;Dbxref=Genbank:WP_002209788.1;Name=WP_002209788.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_002209788.1;transl_table=11 NC_017265.1 RefSeq gene 1265785 1267050 . + . ID=gene1174;Name=YPC_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05890;old_locus_tag=YPC_1279 NC_017265.1 Protein Homology CDS 1265785 1267050 . + 0 ID=cds1125;Parent=gene1174;Dbxref=Genbank:WP_002209787.1;Name=WP_002209787.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209787.1;transl_table=11 NC_017265.1 RefSeq gene 1267112 1267960 . + . ID=gene1175;Name=YPC_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05895;old_locus_tag=YPC_1280 NC_017265.1 Protein Homology CDS 1267112 1267960 . + 0 ID=cds1126;Parent=gene1175;Dbxref=Genbank:WP_002209786.1;Name=WP_002209786.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NC_017265.1 RefSeq gene 1268232 1269584 . - . ID=gene1176;Name=YPC_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05900;old_locus_tag=YPC_1281 NC_017265.1 Protein Homology CDS 1268232 1269584 . - 0 ID=cds1127;Parent=gene1176;Dbxref=Genbank:WP_002209785.1;Name=WP_002209785.1;gbkey=CDS;product=chaperone;protein_id=WP_002209785.1;transl_table=11 NC_017265.1 RefSeq gene 1269724 1271199 . - . ID=gene1177;Name=YPC_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05905;old_locus_tag=YPC_1282 NC_017265.1 Protein Homology CDS 1269724 1271199 . - 0 ID=cds1128;Parent=gene1177;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11 NC_017265.1 RefSeq gene 1271251 1271439 . - . ID=gene1178;Name=YPC_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05910;old_locus_tag=YPC_1283 NC_017265.1 Protein Homology CDS 1271251 1271439 . - 0 ID=cds1129;Parent=gene1178;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11 NC_017265.1 RefSeq gene 1271575 1273134 . - . ID=gene1179;Name=YPC_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05915;old_locus_tag=YPC_1284 NC_017265.1 Protein Homology CDS 1271575 1273134 . - 0 ID=cds1130;Parent=gene1179;Dbxref=Genbank:WP_002209783.1;Name=WP_002209783.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NC_017265.1 RefSeq gene 1273145 1275208 . - . ID=gene1180;Name=YPC_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05920;old_locus_tag=YPC_1285 NC_017265.1 Protein Homology CDS 1273145 1275208 . - 0 ID=cds1131;Parent=gene1180;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11 NC_017265.1 RefSeq gene 1275479 1277710 . + . ID=gene1181;Name=YPC_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05925 NC_017265.1 Protein Homology CDS 1275479 1277710 . + 0 ID=cds1132;Parent=gene1181;Dbxref=Genbank:WP_002214670.1;Name=WP_002214670.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_002214670.1;transl_table=11 NC_017265.1 RefSeq gene 1277770 1279422 . + . ID=gene1182;Name=YPC_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05930 NC_017265.1 Protein Homology CDS 1277770 1279422 . + 0 ID=cds1133;Parent=gene1182;Dbxref=Genbank:WP_032465662.1;Name=WP_032465662.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_032465662.1;transl_table=11 NC_017265.1 RefSeq gene 1279450 1280262 . + . ID=gene1183;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPC_RS05935;old_locus_tag=YPC_1289 NC_017265.1 Protein Homology CDS 1279450 1280262 . + 0 ID=cds1134;Parent=gene1183;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11 NC_017265.1 RefSeq gene 1280490 1280870 . + . ID=gene1184;Name=YPC_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05940 NC_017265.1 Protein Homology CDS 1280490 1280870 . + 0 ID=cds1135;Parent=gene1184;Dbxref=Genbank:WP_002214664.1;Name=WP_002214664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214664.1;transl_table=11 NC_017265.1 RefSeq gene 1280957 1281680 . + . ID=gene1185;Name=YPC_RS05945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS05945;pseudo=true NC_017265.1 Protein Homology CDS 1280957 1281680 . + 0 ID=cds1136;Parent=gene1185;exception=annotated by transcript or proteomic data;gbkey=CDS;product=N-methylation of lysine residues in flagellin;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1281774 1282319 . - . ID=gene1186;Name=YPC_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05950;old_locus_tag=YPC_1293 NC_017265.1 Protein Homology CDS 1281774 1282319 . - 0 ID=cds1137;Parent=gene1186;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NC_017265.1 RefSeq gene 1282548 1283186 . - . ID=gene1187;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YPC_RS05955;old_locus_tag=YPC_1294 NC_017265.1 Protein Homology CDS 1282548 1283186 . - 0 ID=cds1138;Parent=gene1187;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NC_017265.1 RefSeq gene 1283301 1284344 . - . ID=gene1188;Name=YPC_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05960;old_locus_tag=YPC_1295 NC_017265.1 Protein Homology CDS 1283301 1284344 . - 0 ID=cds1139;Parent=gene1188;Dbxref=Genbank:WP_002209777.1;Name=WP_002209777.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002209777.1;transl_table=11 NC_017265.1 RefSeq gene 1284741 1285367 . + . ID=gene1189;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YPC_RS05965;old_locus_tag=YPC_1296 NC_017265.1 Protein Homology CDS 1284741 1285367 . + 0 ID=cds1140;Parent=gene1189;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1285391 1286111 . + . ID=id125;gbkey=repeat_region NC_017265.1 RefSeq gene 1285543 1286001 . + . ID=gene1190;Name=YPC_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05970;old_locus_tag=YPC_1298 NC_017265.1 Protein Homology CDS 1285543 1286001 . + 0 ID=cds1141;Parent=gene1190;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 1286189 1286896 . + . ID=gene1191;Name=YPC_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05975;old_locus_tag=YPC_1299 NC_017265.1 Protein Homology CDS 1286189 1286896 . + 0 ID=cds1142;Parent=gene1191;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NC_017265.1 RefSeq gene 1287108 1287464 . - . ID=gene1192;Name=YPC_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05980;old_locus_tag=YPC_1300 NC_017265.1 Protein Homology CDS 1287108 1287464 . - 0 ID=cds1143;Parent=gene1192;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11 NC_017265.1 RefSeq gene 1287571 1289055 . - . ID=gene1193;Name=YPC_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05985;old_locus_tag=YPC_1301 NC_017265.1 Protein Homology CDS 1287571 1289055 . - 0 ID=cds1144;Parent=gene1193;Dbxref=Genbank:WP_002217569.1;Name=WP_002217569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217569.1;transl_table=11 NC_017265.1 RefSeq gene 1289386 1290450 . + . ID=gene1194;Name=YPC_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05990;old_locus_tag=YPC_1302 NC_017265.1 Protein Homology CDS 1289386 1290450 . + 0 ID=cds1145;Parent=gene1194;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11 NC_017265.1 RefSeq gene 1290539 1290712 . - . ID=gene1195;Name=YPC_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS05995;old_locus_tag=YPC_1303 NC_017265.1 Protein Homology CDS 1290539 1290712 . - 0 ID=cds1146;Parent=gene1195;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11 NC_017265.1 RefSeq gene 1291050 1291745 . + . ID=gene1196;Name=YPC_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06000;old_locus_tag=YPC_1305 NC_017265.1 Protein Homology CDS 1291050 1291745 . + 0 ID=cds1147;Parent=gene1196;Dbxref=Genbank:WP_002208561.1;Name=WP_002208561.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208561.1;transl_table=11 NC_017265.1 RefSeq gene 1291749 1292168 . + . ID=gene1197;Name=YPC_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06005;old_locus_tag=YPC_1306 NC_017265.1 Protein Homology CDS 1291749 1292168 . + 0 ID=cds1148;Parent=gene1197;Dbxref=Genbank:WP_002217563.1;Name=WP_002217563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217563.1;transl_table=11 NC_017265.1 RefSeq gene 1292412 1292882 . - . ID=gene1198;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YPC_RS06010;old_locus_tag=YPC_1307 NC_017265.1 Protein Homology CDS 1292412 1292882 . - 0 ID=cds1149;Parent=gene1198;Dbxref=Genbank:WP_002224836.1;Name=WP_002224836.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_002224836.1;transl_table=11 NC_017265.1 RefSeq gene 1292885 1293454 . - . ID=gene1199;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YPC_RS06015;old_locus_tag=YPC_1308 NC_017265.1 Protein Homology CDS 1292885 1293454 . - 0 ID=cds1150;Parent=gene1199;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11 NC_017265.1 RefSeq gene 1293619 1294500 . + . ID=gene1200;Name=YPC_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06020;old_locus_tag=YPC_1309 NC_017265.1 Protein Homology CDS 1293619 1294500 . + 0 ID=cds1151;Parent=gene1200;Dbxref=Genbank:WP_002227834.1;Name=WP_002227834.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NC_017265.1 RefSeq gene 1294518 1295576 . + . ID=gene1201;Name=YPC_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06025;old_locus_tag=YPC_1310 NC_017265.1 Protein Homology CDS 1294518 1295576 . + 0 ID=cds1152;Parent=gene1201;Dbxref=Genbank:WP_002208557.1;Name=WP_002208557.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_002208557.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1295602 1296319 . + . ID=id126;gbkey=repeat_region NC_017265.1 RefSeq gene 1295606 1295761 . + . ID=gene1202;Name=YPC_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06030 NC_017265.1 Protein Homology CDS 1295606 1295761 . + 0 ID=cds1153;Parent=gene1202;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 1295751 1296209 . + . ID=gene1203;Name=YPC_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06035;old_locus_tag=YPC_1312 NC_017265.1 Protein Homology CDS 1295751 1296209 . + 0 ID=cds1154;Parent=gene1203;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 1296357 1297070 . + . ID=gene1204;Name=YPC_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06040;old_locus_tag=YPC_1313 NC_017265.1 Protein Homology CDS 1296357 1297070 . + 0 ID=cds1155;Parent=gene1204;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NC_017265.1 RefSeq gene 1297289 1298155 . + . ID=gene1205;Name=YPC_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06045;old_locus_tag=YPC_1314 NC_017265.1 Protein Homology CDS 1297289 1298155 . + 0 ID=cds1156;Parent=gene1205;Dbxref=Genbank:WP_002208554.1;Name=WP_002208554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208554.1;transl_table=11 NC_017265.1 RefSeq gene 1298249 1298701 . + . ID=gene1206;Name=YPC_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06050;old_locus_tag=YPC_1315 NC_017265.1 Protein Homology CDS 1298249 1298701 . + 0 ID=cds1157;Parent=gene1206;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11 NC_017265.1 RefSeq gene 1298703 1300802 . + . ID=gene1207;Name=YPC_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06055;old_locus_tag=YPC_1316 NC_017265.1 Protein Homology CDS 1298703 1300802 . + 0 ID=cds1158;Parent=gene1207;Dbxref=Genbank:WP_002208552.1;Name=WP_002208552.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_002208552.1;transl_table=11 NC_017265.1 RefSeq gene 1301007 1301201 . - . ID=gene1208;Name=YPC_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06060;old_locus_tag=YPC_1317 NC_017265.1 Protein Homology CDS 1301007 1301201 . - 0 ID=cds1159;Parent=gene1208;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11 NC_017265.1 RefSeq gene 1301269 1301946 . - . ID=gene1209;Name=YPC_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06065;old_locus_tag=YPC_1318 NC_017265.1 Protein Homology CDS 1301269 1301946 . - 0 ID=cds1160;Parent=gene1209;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11 NC_017265.1 RefSeq gene 1301943 1303070 . - . ID=gene1210;Name=YPC_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06070;old_locus_tag=YPC_1319 NC_017265.1 Protein Homology CDS 1301943 1303070 . - 0 ID=cds1161;Parent=gene1210;Dbxref=Genbank:WP_002208549.1;Name=WP_002208549.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NC_017265.1 RefSeq gene 1303072 1303470 . - . ID=gene1211;Name=YPC_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06075;old_locus_tag=YPC_1320 NC_017265.1 Protein Homology CDS 1303072 1303470 . - 0 ID=cds1162;Parent=gene1211;Dbxref=Genbank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;product=reductase;protein_id=WP_002208548.1;transl_table=11 NC_017265.1 RefSeq gene 1303630 1304103 . - . ID=gene1212;Name=YPC_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06080;old_locus_tag=YPC_1322 NC_017265.1 Protein Homology CDS 1303630 1304103 . - 0 ID=cds1163;Parent=gene1212;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11 NC_017265.1 RefSeq gene 1304414 1305502 . + . ID=gene1213;Name=YPC_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06085;old_locus_tag=YPC_1323 NC_017265.1 Protein Homology CDS 1304414 1305502 . + 0 ID=cds1164;Parent=gene1213;Dbxref=Genbank:WP_002208546.1;Name=WP_002208546.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208546.1;transl_table=11 NC_017265.1 RefSeq gene 1305597 1307366 . + . ID=gene1214;Name=YPC_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06090;old_locus_tag=YPC_1324 NC_017265.1 Protein Homology CDS 1305597 1307366 . + 0 ID=cds1165;Parent=gene1214;Dbxref=Genbank:WP_002208545.1;Name=WP_002208545.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002208545.1;transl_table=11 NC_017265.1 RefSeq gene 1307359 1308429 . + . ID=gene1215;Name=YPC_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06095;old_locus_tag=YPC_1325 NC_017265.1 Protein Homology CDS 1307359 1308429 . + 0 ID=cds1166;Parent=gene1215;Dbxref=Genbank:WP_002208544.1;Name=WP_002208544.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208544.1;transl_table=11 NC_017265.1 RefSeq gene 1308910 1310580 . + . ID=gene1216;Name=YPC_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06100;old_locus_tag=YPC_1326 NC_017265.1 Protein Homology CDS 1308910 1310580 . + 0 ID=cds1167;Parent=gene1216;Dbxref=Genbank:WP_002378486.1;Name=WP_002378486.1;gbkey=CDS;product=sulfatase;protein_id=WP_002378486.1;transl_table=11 NC_017265.1 RefSeq gene 1310638 1311813 . + . ID=gene1217;Name=YPC_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06105;old_locus_tag=YPC_1327 NC_017265.1 Protein Homology CDS 1310638 1311813 . + 0 ID=cds1168;Parent=gene1217;Dbxref=Genbank:WP_002208542.1;Name=WP_002208542.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002208542.1;transl_table=11 NC_017265.1 RefSeq gene 1312567 1313115 . - . ID=gene1218;Name=YPC_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06110;old_locus_tag=YPC_1329 NC_017265.1 Protein Homology CDS 1312567 1313115 . - 0 ID=cds1169;Parent=gene1218;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11 NC_017265.1 RefSeq gene 1313404 1313988 . - . ID=gene1219;Name=YPC_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06115;old_locus_tag=YPC_1330 NC_017265.1 Protein Homology CDS 1313404 1313988 . - 0 ID=cds1170;Parent=gene1219;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NC_017265.1 RefSeq gene 1314219 1317348 . - . ID=gene1220;Name=YPC_RS06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS06120;pseudo=true NC_017265.1 Protein Homology CDS 1314219 1317348 . - 0 ID=cds1171;Parent=gene1220;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug transporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1317763 1318041 . + . ID=gene1221;Name=YPC_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06125;old_locus_tag=YPC_1335 NC_017265.1 Protein Homology CDS 1317763 1318041 . + 0 ID=cds1172;Parent=gene1221;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11 NC_017265.1 RefSeq gene 1318054 1318683 . - . ID=gene1222;Name=YPC_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06130;old_locus_tag=YPC_1336 NC_017265.1 Protein Homology CDS 1318054 1318683 . - 0 ID=cds1173;Parent=gene1222;Dbxref=Genbank:WP_002208537.1;Name=WP_002208537.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208537.1;transl_table=11 NC_017265.1 RefSeq gene 1319516 1320019 . + . ID=gene1223;Name=YPC_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06135;old_locus_tag=YPC_1337 NC_017265.1 Protein Homology CDS 1319516 1320019 . + 0 ID=cds1174;Parent=gene1223;Dbxref=Genbank:WP_002208536.1;Name=WP_002208536.1;gbkey=CDS;product=ferredoxin-type protein NapF;protein_id=WP_002208536.1;transl_table=11 NC_017265.1 RefSeq gene 1320009 1320275 . + . ID=gene1224;Name=YPC_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06140;old_locus_tag=YPC_1338 NC_017265.1 Protein Homology CDS 1320009 1320275 . + 0 ID=cds1175;Parent=gene1224;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11 NC_017265.1 RefSeq gene 1320272 1322764 . + . ID=gene1225;Name=YPC_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06145;old_locus_tag=YPC_1339 NC_017265.1 Protein Homology CDS 1320272 1322764 . + 0 ID=cds1176;Parent=gene1225;Dbxref=Genbank:WP_002208534.1;Name=WP_002208534.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_002208534.1;transl_table=11 NC_017265.1 RefSeq gene 1322847 1323314 . + . ID=gene1226;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YPC_RS06150;old_locus_tag=YPC_1341 NC_017265.1 Protein Homology CDS 1322847 1323314 . + 0 ID=cds1177;Parent=gene1226;Dbxref=Genbank:WP_002208532.1;Name=WP_002208532.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_002208532.1;transl_table=11 NC_017265.1 RefSeq gene 1323342 1323941 . + . ID=gene1227;Name=YPC_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06155;old_locus_tag=YPC_1342 NC_017265.1 Protein Homology CDS 1323342 1323941 . + 0 ID=cds1178;Parent=gene1227;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11 NC_017265.1 RefSeq gene 1324126 1324722 . + . ID=gene1228;Name=YPC_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06160;old_locus_tag=YPC_1343 NC_017265.1 Protein Homology CDS 1324126 1324722 . + 0 ID=cds1179;Parent=gene1228;Dbxref=Genbank:WP_002208529.1;Name=WP_002208529.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11 NC_017265.1 RefSeq gene 1324918 1327197 . + . ID=gene1229;Name=YPC_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06165;old_locus_tag=YPC_1344 NC_017265.1 Protein Homology CDS 1324918 1327197 . + 0 ID=cds1180;Parent=gene1229;Dbxref=Genbank:WP_002224829.1;Name=WP_002224829.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=NADP-dependent malic enzyme;protein_id=WP_002224829.1;transl_table=11 NC_017265.1 RefSeq gene 1327348 1327806 . - . ID=gene1230;Name=YPC_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06170;old_locus_tag=YPC_1345 NC_017265.1 Protein Homology CDS 1327348 1327806 . - 0 ID=cds1181;Parent=gene1230;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11 NC_017265.1 RefSeq gene 1327806 1328735 . - . ID=gene1231;Name=YPC_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06175;old_locus_tag=YPC_1346 NC_017265.1 Protein Homology CDS 1327806 1328735 . - 0 ID=cds1182;Parent=gene1231;Dbxref=Genbank:WP_002208526.1;Name=WP_002208526.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002208526.1;transl_table=11 NC_017265.1 RefSeq gene 1329018 1329443 . + . ID=gene1232;Name=YPC_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06180;old_locus_tag=YPC_1347 NC_017265.1 Protein Homology CDS 1329018 1329443 . + 0 ID=cds1183;Parent=gene1232;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NC_017265.1 RefSeq gene 1329625 1329810 . - . ID=gene1233;Name=YPC_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06185 NC_017265.1 Protein Homology CDS 1329625 1329810 . - 0 ID=cds1184;Parent=gene1233;Dbxref=Genbank:WP_002216562.1;Name=WP_002216562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216562.1;transl_table=11 NC_017265.1 RefSeq gene 1329916 1330332 . + . ID=gene1234;Name=YPC_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06190;old_locus_tag=YPC_1349 NC_017265.1 Protein Homology CDS 1329916 1330332 . + 0 ID=cds1185;Parent=gene1234;Dbxref=Genbank:WP_002208524.1;Name=WP_002208524.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208524.1;transl_table=11 NC_017265.1 RefSeq gene 1330424 1332703 . - . ID=gene1235;Name=YPC_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06195;old_locus_tag=YPC_1350 NC_017265.1 Protein Homology CDS 1330424 1332703 . - 0 ID=cds1186;Parent=gene1235;Dbxref=Genbank:WP_002208523.1;Name=WP_002208523.1;gbkey=CDS;product=autotransporter;protein_id=WP_002208523.1;transl_table=11 NC_017265.1 RefSeq gene 1333190 1333603 . - . ID=gene1236;Name=YPC_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06200;old_locus_tag=YPC_1352 NC_017265.1 Protein Homology CDS 1333190 1333603 . - 0 ID=cds1187;Parent=gene1236;Dbxref=Genbank:WP_002208522.1;Name=WP_002208522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208522.1;transl_table=11 NC_017265.1 RefSeq gene 1333962 1334573 . + . ID=gene1237;Name=YPC_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06205;old_locus_tag=YPC_1353 NC_017265.1 Protein Homology CDS 1333962 1334573 . + 0 ID=cds1188;Parent=gene1237;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11 NC_017265.1 RefSeq gene 1334751 1335650 . + . ID=gene1238;Name=YPC_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06210;old_locus_tag=YPC_1354 NC_017265.1 Protein Homology CDS 1334751 1335650 . + 0 ID=cds1189;Parent=gene1238;Dbxref=Genbank:WP_002208519.1;Name=WP_002208519.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_002208519.1;transl_table=11 NC_017265.1 RefSeq gene 1335748 1336641 . - . ID=gene1239;Name=YPC_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06215;old_locus_tag=YPC_1355 NC_017265.1 Protein Homology CDS 1335748 1336641 . - 0 ID=cds1190;Parent=gene1239;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11 NC_017265.1 RefSeq gene 1336704 1337327 . - . ID=gene1240;Name=YPC_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06220;old_locus_tag=YPC_1356 NC_017265.1 Protein Homology CDS 1336704 1337327 . - 0 ID=cds1191;Parent=gene1240;Dbxref=Genbank:WP_002354634.1;Name=WP_002354634.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_002354634.1;transl_table=11 NC_017265.1 RefSeq gene 1337611 1338738 . - . ID=gene1241;Name=YPC_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06225;old_locus_tag=YPC_1357 NC_017265.1 Protein Homology CDS 1337611 1338738 . - 0 ID=cds1192;Parent=gene1241;Dbxref=Genbank:WP_002224823.1;Name=WP_002224823.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224823.1;transl_table=11 NC_017265.1 RefSeq gene 1339007 1339879 . + . ID=gene1242;Name=YPC_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06230;old_locus_tag=YPC_1358 NC_017265.1 Protein Homology CDS 1339007 1339879 . + 0 ID=cds1193;Parent=gene1242;Dbxref=Genbank:WP_015683572.1;Name=WP_015683572.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_015683572.1;transl_table=11 NC_017265.1 RefSeq gene 1339961 1340431 . + . ID=gene1243;Name=YPC_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06235;old_locus_tag=YPC_1359 NC_017265.1 Protein Homology CDS 1339961 1340431 . + 0 ID=cds1194;Parent=gene1243;Dbxref=Genbank:WP_002208515.1;Name=WP_002208515.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_002208515.1;transl_table=11 NC_017265.1 RefSeq gene 1340471 1340623 . + . ID=gene1244;Name=YPC_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06240;old_locus_tag=YPC_1360 NC_017265.1 Protein Homology CDS 1340471 1340623 . + 0 ID=cds1195;Parent=gene1244;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11 NC_017265.1 RefSeq gene 1340620 1341498 . + . ID=gene1245;Name=YPC_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06245;old_locus_tag=YPC_1361 NC_017265.1 Protein Homology CDS 1340620 1341498 . + 0 ID=cds1196;Parent=gene1245;Dbxref=Genbank:WP_002208514.1;Name=WP_002208514.1;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208514.1;transl_table=11 NC_017265.1 RefSeq gene 1342103 1343635 . + . ID=gene1246;Name=YPC_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06250;old_locus_tag=YPC_1362 NC_017265.1 Protein Homology CDS 1342103 1343635 . + 0 ID=cds1197;Parent=gene1246;Dbxref=Genbank:WP_002208513.1;Name=WP_002208513.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002208513.1;transl_table=11 NC_017265.1 RefSeq gene 1343950 1344987 . + . ID=gene1247;Name=YPC_RS06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS06255;pseudo=true NC_017265.1 Protein Homology CDS 1343950 1344987 . + 0 ID=cds1198;Parent=gene1247;gbkey=CDS;product=thiosulfate transporter subunit;pseudo=true;transl_except=(pos:1344250..1344252%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 1344987 1345820 . + . ID=gene1248;Name=YPC_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06260;old_locus_tag=YPC_1365 NC_017265.1 Protein Homology CDS 1344987 1345820 . + 0 ID=cds1199;Parent=gene1248;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11 NC_017265.1 RefSeq gene 1345820 1346695 . + . ID=gene1249;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YPC_RS06265;old_locus_tag=YPC_1366 NC_017265.1 Protein Homology CDS 1345820 1346695 . + 0 ID=cds1200;Parent=gene1249;Dbxref=Genbank:WP_002208510.1;Name=WP_002208510.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_002208510.1;transl_table=11 NC_017265.1 RefSeq gene 1346685 1347776 . + . ID=gene1250;Name=YPC_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06270;old_locus_tag=YPC_1367 NC_017265.1 Protein Homology CDS 1346685 1347776 . + 0 ID=cds1201;Parent=gene1250;Dbxref=Genbank:WP_002208509.1;Name=WP_002208509.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_002208509.1;transl_table=11 NC_017265.1 RefSeq gene 1347947 1348825 . + . ID=gene1251;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YPC_RS06275;old_locus_tag=YPC_1368 NC_017265.1 Protein Homology CDS 1347947 1348825 . + 0 ID=cds1202;Parent=gene1251;Dbxref=Genbank:WP_002208508.1;Name=WP_002208508.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=WP_002208508.1;transl_table=11 NC_017265.1 RefSeq gene 1349070 1350302 . + . ID=gene1252;Name=YPC_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06280;old_locus_tag=YPC_1369 NC_017265.1 Protein Homology CDS 1349070 1350302 . + 0 ID=cds1203;Parent=gene1252;Dbxref=Genbank:WP_002208507.1;Name=WP_002208507.1;gbkey=CDS;product=type III secretion protein GogB;protein_id=WP_002208507.1;transl_table=11 NC_017265.1 RefSeq gene 1350682 1351389 . - . ID=gene1253;Name=YPC_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06285;old_locus_tag=YPC_1370 NC_017265.1 Protein Homology CDS 1350682 1351389 . - 0 ID=cds1204;Parent=gene1253;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11 NC_017265.1 RefSeq gene 1351386 1352930 . - . ID=gene1254;Name=YPC_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06290;old_locus_tag=YPC_1371 NC_017265.1 Protein Homology CDS 1351386 1352930 . - 0 ID=cds1205;Parent=gene1254;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1352986 1353154 . + . ID=id127;gbkey=repeat_region NC_017265.1 RefSeq gene 1353163 1354581 . - . ID=gene1255;Name=YPC_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06295;old_locus_tag=YPC_1373 NC_017265.1 Protein Homology CDS 1353163 1354581 . - 0 ID=cds1206;Parent=gene1255;Dbxref=Genbank:WP_042468361.1;Name=WP_042468361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468361.1;transl_table=11 NC_017265.1 RefSeq gene 1355289 1356470 . + . ID=gene1256;Name=YPC_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06300;old_locus_tag=YPC_1374 NC_017265.1 Protein Homology CDS 1355289 1356470 . + 0 ID=cds1207;Parent=gene1256;Dbxref=Genbank:WP_002228410.1;Name=WP_002228410.1;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002228410.1;transl_table=11 NC_017265.1 RefSeq gene 1356504 1356695 . + . ID=gene1257;Name=YPC_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06305;old_locus_tag=YPC_1375 NC_017265.1 Protein Homology CDS 1356504 1356695 . + 0 ID=cds1208;Parent=gene1257;Dbxref=Genbank:WP_002215018.1;Name=WP_002215018.1;gbkey=CDS;product=creatininase;protein_id=WP_002215018.1;transl_table=11 NC_017265.1 RefSeq gene 1356716 1357723 . + . ID=gene1258;Name=YPC_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06310;old_locus_tag=YPC_1376 NC_017265.1 Protein Homology CDS 1356716 1357723 . + 0 ID=cds1209;Parent=gene1258;Dbxref=Genbank:WP_002228411.1;Name=WP_002228411.1;gbkey=CDS;product=peptidase M24;protein_id=WP_002228411.1;transl_table=11 NC_017265.1 RefSeq gene 1357866 1358063 . + . ID=gene1259;Name=YPC_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06315;old_locus_tag=YPC_1377 NC_017265.1 Protein Homology CDS 1357866 1358063 . + 0 ID=cds1210;Parent=gene1259;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11 NC_017265.1 RefSeq gene 1358060 1359520 . + . ID=gene1260;Name=YPC_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06320;old_locus_tag=YPC_1378 NC_017265.1 Protein Homology CDS 1358060 1359520 . + 0 ID=cds1211;Parent=gene1260;Dbxref=Genbank:WP_002208498.1;Name=WP_002208498.1;gbkey=CDS;product=permease;protein_id=WP_002208498.1;transl_table=11 NC_017265.1 RefSeq gene 1359580 1361226 . + . ID=gene1261;Name=YPC_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06325;old_locus_tag=YPC_1379 NC_017265.1 Protein Homology CDS 1359580 1361226 . + 0 ID=cds1212;Parent=gene1261;Dbxref=Genbank:WP_002208497.1;Name=WP_002208497.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_002208497.1;transl_table=11 NC_017265.1 RefSeq gene 1361481 1363517 . - . ID=gene1262;Name=YPC_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06330;old_locus_tag=YPC_1380 NC_017265.1 Protein Homology CDS 1361481 1363517 . - 0 ID=cds1213;Parent=gene1262;Dbxref=Genbank:WP_002208496.1;Name=WP_002208496.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002208496.1;transl_table=11 NC_017265.1 RefSeq gene 1363521 1364726 . - . ID=gene1263;Name=YPC_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06335;old_locus_tag=YPC_1381 NC_017265.1 Protein Homology CDS 1363521 1364726 . - 0 ID=cds1214;Parent=gene1263;Dbxref=Genbank:WP_002208495.1;Name=WP_002208495.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002208495.1;transl_table=11 NC_017265.1 RefSeq gene 1364914 1365597 . + . ID=gene1264;Name=YPC_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06340;old_locus_tag=YPC_1382 NC_017265.1 Protein Homology CDS 1364914 1365597 . + 0 ID=cds1215;Parent=gene1264;Dbxref=Genbank:WP_002208494.1;Name=WP_002208494.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208494.1;transl_table=11 NC_017265.1 RefSeq gene 1365623 1366972 . + . ID=gene1265;Name=YPC_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06345;old_locus_tag=YPC_1383 NC_017265.1 Protein Homology CDS 1365623 1366972 . + 0 ID=cds1216;Parent=gene1265;Dbxref=Genbank:WP_002208493.1;Name=WP_002208493.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208493.1;transl_table=11 NC_017265.1 RefSeq gene 1367058 1367252 . + . ID=gene1266;Name=YPC_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06350 NC_017265.1 Protein Homology CDS 1367058 1367252 . + 0 ID=cds1217;Parent=gene1266;Dbxref=Genbank:WP_002430126.1;Name=WP_002430126.1;gbkey=CDS;product=invasin;protein_id=WP_002430126.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1367089 1369769 . + . ID=id128;gbkey=repeat_region NC_017265.1 RefSeq gene 1367367 1368146 . - . ID=gene1267;Name=YPC_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06355;old_locus_tag=YPC_1387 NC_017265.1 Protein Homology CDS 1367367 1368146 . - 0 ID=cds1218;Parent=gene1267;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 1368146 1369168 . - . ID=gene1268;Name=YPC_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06360;old_locus_tag=YPC_1388 NC_017265.1 Protein Homology CDS 1368146 1369168 . - 0 ID=cds1219;Parent=gene1268;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 1369225 1369659 . + . ID=gene1269;Name=YPC_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06365;old_locus_tag=YPC_1389 NC_017265.1 Protein Homology CDS 1369225 1369659 . + 0 ID=cds1220;Parent=gene1269;Dbxref=Genbank:WP_002221590.1;Name=WP_002221590.1;gbkey=CDS;product=transposase;protein_id=WP_002221590.1;transl_table=11 NC_017265.1 RefSeq gene 1369802 1370311 . - . ID=gene1270;Name=YPC_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06370;old_locus_tag=YPC_1390 NC_017265.1 Protein Homology CDS 1369802 1370311 . - 0 ID=cds1221;Parent=gene1270;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NC_017265.1 RefSeq gene 1370360 1372087 . - . ID=gene1271;Name=YPC_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06375;old_locus_tag=YPC_1391 NC_017265.1 Protein Homology CDS 1370360 1372087 . - 0 ID=cds1222;Parent=gene1271;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11 NC_017265.1 RefSeq gene 1372136 1372393 . - . ID=gene1272;Name=YPC_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06380;old_locus_tag=YPC_1392 NC_017265.1 Protein Homology CDS 1372136 1372393 . - 0 ID=cds1223;Parent=gene1272;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11 NC_017265.1 RefSeq gene 1372892 1373860 . - . ID=gene1273;Name=YPC_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06385;old_locus_tag=YPC_1393 NC_017265.1 Protein Homology CDS 1372892 1373860 . - 0 ID=cds1224;Parent=gene1273;Dbxref=Genbank:WP_002222180.1;Name=WP_002222180.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11 NC_017265.1 RefSeq gene 1374017 1374751 . - . ID=gene1274;Name=YPC_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06390;old_locus_tag=YPC_1394 NC_017265.1 Protein Homology CDS 1374017 1374751 . - 0 ID=cds1225;Parent=gene1274;Dbxref=Genbank:WP_002213487.1;Name=WP_002213487.1;gbkey=CDS;product=cysteine biosynthesis protein CysZ;protein_id=WP_002213487.1;transl_table=11 NC_017265.1 RefSeq gene 1375000 1375986 . + . ID=gene1275;Name=YPC_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06395;old_locus_tag=YPC_1395 NC_017265.1 Protein Homology CDS 1375000 1375986 . + 0 ID=cds1226;Parent=gene1275;Dbxref=Genbank:WP_002227089.1;Name=WP_002227089.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_002227089.1;transl_table=11 NC_017265.1 RefSeq gene 1376077 1378089 . + . ID=gene1276;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YPC_RS06400;old_locus_tag=YPC_1396 NC_017265.1 Protein Homology CDS 1376077 1378089 . + 0 ID=cds1227;Parent=gene1276;Dbxref=Genbank:WP_015683576.1;Name=WP_015683576.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=WP_015683576.1;transl_table=11 NC_017265.1 RefSeq gene 1378109 1378324 . + . ID=gene1277;Name=YPC_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06405;old_locus_tag=YPC_1397 NC_017265.1 Protein Homology CDS 1378109 1378324 . + 0 ID=cds1228;Parent=gene1277;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11 NC_017265.1 RefSeq gene 1378425 1378772 . - . ID=gene1278;Name=YPC_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06410;old_locus_tag=YPC_1398 NC_017265.1 Protein Homology CDS 1378425 1378772 . - 0 ID=cds1229;Parent=gene1278;Dbxref=Genbank:WP_002213372.1;Name=WP_002213372.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213372.1;transl_table=11 NC_017265.1 RefSeq gene 1378904 1379509 . - . ID=gene1279;Name=YPC_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06415;old_locus_tag=YPC_1400 NC_017265.1 Protein Homology CDS 1378904 1379509 . - 0 ID=cds1230;Parent=gene1279;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11 NC_017265.1 RefSeq gene 1379704 1379779 . - . ID=gene1280;Name=YPC_RS06420;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS06420;old_locus_tag=YPC_1401 NC_017265.1 tRNAscan-SE tRNA 1379704 1379779 . - . ID=rna47;Parent=gene1280;anticodon=(pos:complement(1379744..1379746));gbkey=tRNA;product=tRNA-Ala NC_017265.1 tRNAscan-SE exon 1379704 1379779 . - . ID=id129;Parent=rna47;anticodon=(pos:complement(1379744..1379746));gbkey=tRNA;product=tRNA-Ala NC_017265.1 RefSeq gene 1379857 1379932 . - . ID=gene1281;Name=YPC_RS06425;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS06425;old_locus_tag=YPC_1402 NC_017265.1 tRNAscan-SE tRNA 1379857 1379932 . - . ID=rna48;Parent=gene1281;anticodon=(pos:complement(1379897..1379899));gbkey=tRNA;product=tRNA-Ala NC_017265.1 tRNAscan-SE exon 1379857 1379932 . - . ID=id130;Parent=rna48;anticodon=(pos:complement(1379897..1379899));gbkey=tRNA;product=tRNA-Ala NC_017265.1 RefSeq repeat_region 1380113 1380837 . + . ID=id131;gbkey=repeat_region NC_017265.1 RefSeq gene 1380223 1380681 . - . ID=gene1282;Name=YPC_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06430;old_locus_tag=YPC_1403 NC_017265.1 Protein Homology CDS 1380223 1380681 . - 0 ID=cds1231;Parent=gene1282;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 1380874 1382289 . - . ID=gene1283;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YPC_RS06435;old_locus_tag=YPC_1405 NC_017265.1 Protein Homology CDS 1380874 1382289 . - 0 ID=cds1232;Parent=gene1283;Dbxref=Genbank:WP_002222185.1;Name=WP_002222185.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_002222185.1;transl_table=11 NC_017265.1 RefSeq gene 1382564 1382639 . + . ID=gene1284;Name=YPC_RS06440;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS06440;old_locus_tag=YPC_1406 NC_017265.1 tRNAscan-SE tRNA 1382564 1382639 . + . ID=rna49;Parent=gene1284;anticodon=(pos:1382597..1382599);gbkey=tRNA;product=tRNA-Val NC_017265.1 tRNAscan-SE exon 1382564 1382639 . + . ID=id132;Parent=rna49;anticodon=(pos:1382597..1382599);gbkey=tRNA;product=tRNA-Val NC_017265.1 RefSeq gene 1382684 1382759 . + . ID=gene1285;Name=YPC_RS06445;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS06445;old_locus_tag=YPC_1407 NC_017265.1 tRNAscan-SE tRNA 1382684 1382759 . + . ID=rna50;Parent=gene1285;anticodon=(pos:1382717..1382719);gbkey=tRNA;product=tRNA-Val NC_017265.1 tRNAscan-SE exon 1382684 1382759 . + . ID=id133;Parent=rna50;anticodon=(pos:1382717..1382719);gbkey=tRNA;product=tRNA-Val NC_017265.1 RefSeq gene 1382959 1383034 . + . ID=gene1286;Name=YPC_RS06450;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS06450;old_locus_tag=YPC_1408 NC_017265.1 tRNAscan-SE tRNA 1382959 1383034 . + . ID=rna51;Parent=gene1286;anticodon=(pos:1382992..1382994);gbkey=tRNA;product=tRNA-Lys NC_017265.1 tRNAscan-SE exon 1382959 1383034 . + . ID=id134;Parent=rna51;anticodon=(pos:1382992..1382994);gbkey=tRNA;product=tRNA-Lys NC_017265.1 RefSeq gene 1383411 1384595 . - . ID=gene1287;Name=YPC_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06455;old_locus_tag=YPC_1409 NC_017265.1 Protein Homology CDS 1383411 1384595 . - 0 ID=cds1233;Parent=gene1287;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11 NC_017265.1 RefSeq gene 1385046 1386275 . + . ID=gene1288;Name=YPC_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06460;old_locus_tag=YPC_1410 NC_017265.1 Protein Homology CDS 1385046 1386275 . + 0 ID=cds1234;Parent=gene1288;Dbxref=Genbank:WP_002211621.1;Name=WP_002211621.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_002211621.1;transl_table=11 NC_017265.1 RefSeq gene 1386368 1386682 . - . ID=gene1289;Name=YPC_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06465 NC_017265.1 Protein Homology CDS 1386368 1386682 . - 0 ID=cds1235;Parent=gene1289;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11 NC_017265.1 RefSeq gene 1386952 1387941 . - . ID=gene1290;Name=YPC_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06470;old_locus_tag=YPC_1414 NC_017265.1 Protein Homology CDS 1386952 1387941 . - 0 ID=cds1236;Parent=gene1290;Dbxref=Genbank:WP_002211618.1;Name=WP_002211618.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_002211618.1;transl_table=11 NC_017265.1 RefSeq gene 1388077 1388955 . - . ID=gene1291;Name=YPC_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06475;old_locus_tag=YPC_1416 NC_017265.1 Protein Homology CDS 1388077 1388955 . - 0 ID=cds1237;Parent=gene1291;Dbxref=Genbank:WP_015683577.1;Name=WP_015683577.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_015683577.1;transl_table=11 NC_017265.1 RefSeq gene 1389058 1389534 . + . ID=gene1292;Name=YPC_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06480;old_locus_tag=YPC_1417 NC_017265.1 Protein Homology CDS 1389058 1389534 . + 0 ID=cds1238;Parent=gene1292;Dbxref=Genbank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002211616.1;transl_table=11 NC_017265.1 RefSeq gene 1389715 1390686 . + . ID=gene1293;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YPC_RS06485;old_locus_tag=YPC_1418 NC_017265.1 Protein Homology CDS 1389715 1390686 . + 0 ID=cds1239;Parent=gene1293;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NC_017265.1 RefSeq gene 1390764 1392011 . - . ID=gene1294;Name=YPC_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06490;old_locus_tag=YPC_1419 NC_017265.1 Protein Homology CDS 1390764 1392011 . - 0 ID=cds1240;Parent=gene1294;Dbxref=Genbank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211614.1;transl_table=11 NC_017265.1 RefSeq gene 1392277 1393512 . + . ID=gene1295;Name=YPC_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06495;old_locus_tag=YPC_1420 NC_017265.1 Protein Homology CDS 1392277 1393512 . + 0 ID=cds1241;Parent=gene1295;Dbxref=Genbank:WP_002211613.1;Name=WP_002211613.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002211613.1;transl_table=11 NC_017265.1 RefSeq gene 1393776 1394300 . + . ID=gene1296;Name=YPC_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06500;old_locus_tag=YPC_1421 NC_017265.1 Protein Homology CDS 1393776 1394300 . + 0 ID=cds1242;Parent=gene1296;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11 NC_017265.1 RefSeq gene 1394395 1394826 . - . ID=gene1297;Name=YPC_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06505;old_locus_tag=YPC_1422 NC_017265.1 Protein Homology CDS 1394395 1394826 . - 0 ID=cds1243;Parent=gene1297;Dbxref=Genbank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_002211610.1;transl_table=11 NC_017265.1 RefSeq gene 1395416 1396087 . + . ID=gene1298;Name=YPC_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06510 NC_017265.1 Protein Homology CDS 1395416 1396087 . + 0 ID=cds1244;Parent=gene1298;Dbxref=Genbank:WP_002215847.1;Name=WP_002215847.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215847.1;transl_table=11 NC_017265.1 RefSeq gene 1396114 1396468 . + . ID=gene1299;Name=YPC_RS06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS06515;pseudo=true NC_017265.1 Protein Homology CDS 1396114 1396468 . + 0 ID=cds1245;Parent=gene1299;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1396465 1397121 . + . ID=gene1300;Name=YPC_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06520 NC_017265.1 Protein Homology CDS 1396465 1397121 . + 0 ID=cds1246;Parent=gene1300;Dbxref=Genbank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211607.1;transl_table=11 NC_017265.1 RefSeq gene 1397367 1397936 . - . ID=gene1301;Name=YPC_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06525;old_locus_tag=YPC_1427 NC_017265.1 Protein Homology CDS 1397367 1397936 . - 0 ID=cds1247;Parent=gene1301;Dbxref=Genbank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_002211606.1;transl_table=11 NC_017265.1 RefSeq gene 1397933 1398529 . - . ID=gene1302;Name=YPC_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06530;old_locus_tag=YPC_1428 NC_017265.1 Protein Homology CDS 1397933 1398529 . - 0 ID=cds1248;Parent=gene1302;Dbxref=Genbank:WP_002228419.1;Name=WP_002228419.1;gbkey=CDS;product=nitrate reductase subunit delta;protein_id=WP_002228419.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1398555 1398905 . + . ID=id135;gbkey=repeat_region NC_017265.1 RefSeq gene 1399011 1399787 . - . ID=gene1303;Name=YPC_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06535;old_locus_tag=YPC_1429 NC_017265.1 Protein Homology CDS 1399011 1399787 . - 0 ID=cds1249;Parent=gene1303;Dbxref=Genbank:WP_002211604.1;Name=WP_002211604.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211604.1;transl_table=11 NC_017265.1 RefSeq gene 1399789 1400406 . - . ID=gene1304;Name=YPC_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06540;old_locus_tag=YPC_1430 NC_017265.1 Protein Homology CDS 1399789 1400406 . - 0 ID=cds1250;Parent=gene1304;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11 NC_017265.1 RefSeq gene 1400418 1402844 . - . ID=gene1305;Name=YPC_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06545;old_locus_tag=YPC_1431 NC_017265.1 Protein Homology CDS 1400418 1402844 . - 0 ID=cds1251;Parent=gene1305;Dbxref=Genbank:WP_002228420.1;Name=WP_002228420.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002228420.1;transl_table=11 NC_017265.1 RefSeq gene 1403675 1404523 . + . ID=gene1306;Name=YPC_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06550;old_locus_tag=YPC_1432 NC_017265.1 Protein Homology CDS 1403675 1404523 . + 0 ID=cds1252;Parent=gene1306;Dbxref=Genbank:WP_002211601.1;Name=WP_002211601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211601.1;transl_table=11 NC_017265.1 RefSeq gene 1404753 1405232 . - . ID=gene1307;Name=YPC_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06555 NC_017265.1 Protein Homology CDS 1404753 1405232 . - 0 ID=cds1253;Parent=gene1307;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11 NC_017265.1 RefSeq gene 1405699 1406223 . + . ID=gene1308;Name=YPC_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06560;old_locus_tag=YPC_1435 NC_017265.1 Protein Homology CDS 1405699 1406223 . + 0 ID=cds1254;Parent=gene1308;Dbxref=Genbank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211599.1;transl_table=11 NC_017265.1 RefSeq gene 1406296 1407345 . - . ID=gene1309;Name=YPC_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06565;old_locus_tag=YPC_1436 NC_017265.1 Protein Homology CDS 1406296 1407345 . - 0 ID=cds1255;Parent=gene1309;Dbxref=Genbank:WP_002211598.1;Name=WP_002211598.1;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_002211598.1;transl_table=11 NC_017265.1 RefSeq gene 1407342 1408929 . - . ID=gene1310;Name=YPC_RS06570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS06570;pseudo=true NC_017265.1 Protein Homology CDS 1407342 1408929 . - 0 ID=cds1256;Parent=gene1310;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron ABC transporter permease;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1408985 1410004 . - . ID=gene1311;Name=YPC_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06575;old_locus_tag=YPC_1439 NC_017265.1 Protein Homology CDS 1408985 1410004 . - 0 ID=cds1257;Parent=gene1311;Dbxref=Genbank:WP_002211596.1;Name=WP_002211596.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211596.1;transl_table=11 NC_017265.1 RefSeq gene 1410333 1411427 . + . ID=gene1312;Name=YPC_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06580;old_locus_tag=YPC_1440 NC_017265.1 Protein Homology CDS 1410333 1411427 . + 0 ID=cds1258;Parent=gene1312;Dbxref=Genbank:WP_002211594.1;Name=WP_002211594.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_002211594.1;transl_table=11 NC_017265.1 RefSeq gene 1412693 1413295 . + . ID=gene1313;Name=YPC_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06585;old_locus_tag=YPC_1442 NC_017265.1 Protein Homology CDS 1412693 1413295 . + 0 ID=cds1259;Parent=gene1313;Dbxref=Genbank:WP_002211590.1;Name=WP_002211590.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211590.1;transl_table=11 NC_017265.1 RefSeq gene 1413653 1414135 . - . ID=gene1314;Name=YPC_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06590;old_locus_tag=YPC_1443 NC_017265.1 Protein Homology CDS 1413653 1414135 . - 0 ID=cds1260;Parent=gene1314;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11 NC_017265.1 RefSeq gene 1414132 1415814 . - . ID=gene1315;Name=YPC_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06595;old_locus_tag=YPC_1444 NC_017265.1 Protein Homology CDS 1414132 1415814 . - 0 ID=cds1261;Parent=gene1315;Dbxref=Genbank:WP_002211588.1;Name=WP_002211588.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211588.1;transl_table=11 NC_017265.1 RefSeq gene 1415815 1416516 . - . ID=gene1316;Name=YPC_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06600;old_locus_tag=YPC_1445 NC_017265.1 Protein Homology CDS 1415815 1416516 . - 0 ID=cds1262;Parent=gene1316;Dbxref=Genbank:WP_002224806.1;Name=WP_002224806.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224806.1;transl_table=11 NC_017265.1 RefSeq gene 1416513 1417850 . - . ID=gene1317;Name=YPC_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06605;old_locus_tag=YPC_1446 NC_017265.1 Protein Homology CDS 1416513 1417850 . - 0 ID=cds1263;Parent=gene1317;Dbxref=Genbank:WP_002211586.1;Name=WP_002211586.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002211586.1;transl_table=11 NC_017265.1 RefSeq gene 1417890 1418921 . - . ID=gene1318;Name=YPC_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06610;old_locus_tag=YPC_1447 NC_017265.1 Protein Homology CDS 1417890 1418921 . - 0 ID=cds1264;Parent=gene1318;Dbxref=Genbank:WP_002215319.1;Name=WP_002215319.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215319.1;transl_table=11 NC_017265.1 RefSeq gene 1418928 1420109 . - . ID=gene1319;Name=YPC_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06615;old_locus_tag=YPC_1448 NC_017265.1 Protein Homology CDS 1418928 1420109 . - 0 ID=cds1265;Parent=gene1319;Dbxref=Genbank:WP_002211584.1;Name=WP_002211584.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211584.1;transl_table=11 NC_017265.1 RefSeq gene 1420208 1421233 . - . ID=gene1320;Name=YPC_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06620;old_locus_tag=YPC_1449 NC_017265.1 Protein Homology CDS 1420208 1421233 . - 0 ID=cds1266;Parent=gene1320;Dbxref=Genbank:WP_002211583.1;Name=WP_002211583.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211583.1;transl_table=11 NC_017265.1 RefSeq gene 1421233 1423113 . - . ID=gene1321;Name=YPC_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06625;old_locus_tag=YPC_1450 NC_017265.1 Protein Homology CDS 1421233 1423113 . - 0 ID=cds1267;Parent=gene1321;Dbxref=Genbank:WP_002211582.1;Name=WP_002211582.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211582.1;transl_table=11 NC_017265.1 RefSeq gene 1423896 1426571 . + . ID=gene1322;Name=YPC_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06630;old_locus_tag=YPC_1452 NC_017265.1 Protein Homology CDS 1423896 1426571 . + 0 ID=cds1268;Parent=gene1322;Dbxref=Genbank:WP_002215317.1;Name=WP_002215317.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_002215317.1;transl_table=11 NC_017265.1 RefSeq gene 1426772 1427317 . + . ID=gene1323;Name=YPC_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06635;old_locus_tag=YPC_1453 NC_017265.1 Protein Homology CDS 1426772 1427317 . + 0 ID=cds1269;Parent=gene1323;Dbxref=Genbank:WP_002211580.1;Name=WP_002211580.1;gbkey=CDS;product=frimbrial protein;protein_id=WP_002211580.1;transl_table=11 NC_017265.1 RefSeq gene 1427474 1428235 . + . ID=gene1324;Name=YPC_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06640;old_locus_tag=YPC_1454 NC_017265.1 Protein Homology CDS 1427474 1428235 . + 0 ID=cds1270;Parent=gene1324;Dbxref=Genbank:WP_002211579.1;Name=WP_002211579.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211579.1;transl_table=11 NC_017265.1 RefSeq gene 1428363 1429913 . + . ID=gene1325;Name=YPC_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06645;old_locus_tag=YPC_1455 NC_017265.1 Protein Homology CDS 1428363 1429913 . + 0 ID=cds1271;Parent=gene1325;Dbxref=Genbank:WP_002215157.1;Name=WP_002215157.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002215157.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1429896 1431216 . + . ID=id136;gbkey=repeat_region NC_017265.1 RefSeq gene 1429935 1431143 . - . ID=gene1326;Name=YPC_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06650;old_locus_tag=YPC_1456 NC_017265.1 Protein Homology CDS 1429935 1431143 . - 0 ID=cds1272;Parent=gene1326;Dbxref=Genbank:WP_015683580.1;Name=WP_015683580.1;gbkey=CDS;product=transposase;protein_id=WP_015683580.1;transl_table=11 NC_017265.1 RefSeq gene 1431168 1432358 . + . ID=gene1327;Name=YPC_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06655;old_locus_tag=YPC_1457 NC_017265.1 Protein Homology CDS 1431168 1432358 . + 0 ID=cds1273;Parent=gene1327;Dbxref=Genbank:WP_002211577.1;Name=WP_002211577.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002211577.1;transl_table=11 NC_017265.1 RefSeq gene 1432343 1432951 . + . ID=gene1328;Name=YPC_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06660;old_locus_tag=YPC_1458 NC_017265.1 Protein Homology CDS 1432343 1432951 . + 0 ID=cds1274;Parent=gene1328;Dbxref=Genbank:WP_002211576.1;Name=WP_002211576.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211576.1;transl_table=11 NC_017265.1 RefSeq gene 1433056 1433580 . + . ID=gene1329;Name=YPC_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06665;old_locus_tag=YPC_1459 NC_017265.1 Protein Homology CDS 1433056 1433580 . + 0 ID=cds1275;Parent=gene1329;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11 NC_017265.1 RefSeq gene 1433604 1435106 . + . ID=gene1330;Name=YPC_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06670;old_locus_tag=YPC_1460 NC_017265.1 Protein Homology CDS 1433604 1435106 . + 0 ID=cds1276;Parent=gene1330;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11 NC_017265.1 RefSeq gene 1435432 1435917 . + . ID=gene1331;Name=YPC_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06675;old_locus_tag=YPC_1461 NC_017265.1 Protein Homology CDS 1435432 1435917 . + 0 ID=cds1277;Parent=gene1331;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NC_017265.1 RefSeq gene 1436191 1436730 . + . ID=gene1332;Name=YPC_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06680;old_locus_tag=YPC_1462 NC_017265.1 Protein Homology CDS 1436191 1436730 . + 0 ID=cds1278;Parent=gene1332;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11 NC_017265.1 RefSeq gene 1436734 1438083 . + . ID=gene1333;Name=YPC_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06685;old_locus_tag=YPC_1463 NC_017265.1 Protein Homology CDS 1436734 1438083 . + 0 ID=cds1279;Parent=gene1333;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11 NC_017265.1 RefSeq gene 1438080 1438748 . + . ID=gene1334;Name=YPC_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06690;old_locus_tag=YPC_1464 NC_017265.1 Protein Homology CDS 1438080 1438748 . + 0 ID=cds1280;Parent=gene1334;Dbxref=Genbank:WP_042468373.1;Name=WP_042468373.1;gbkey=CDS;product=type IV secretion protein DotU;protein_id=WP_042468373.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1438672 1440638 . + . ID=id137;gbkey=repeat_region NC_017265.1 RefSeq gene 1438762 1439784 . + . ID=gene1335;Name=YPC_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06695;old_locus_tag=YPC_1465 NC_017265.1 Protein Homology CDS 1438762 1439784 . + 0 ID=cds1281;Parent=gene1335;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 1439784 1440563 . + . ID=gene1336;Name=YPC_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06700;old_locus_tag=YPC_1466 NC_017265.1 Protein Homology CDS 1439784 1440563 . + 0 ID=cds1282;Parent=gene1336;Dbxref=Genbank:WP_042468376.1;Name=WP_042468376.1;gbkey=CDS;product=transposase;protein_id=WP_042468376.1;transl_table=11 NC_017265.1 RefSeq gene 1440579 1441415 . + . ID=gene1337;Name=YPC_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06705;old_locus_tag=YPC_1467 NC_017265.1 Protein Homology CDS 1440579 1441415 . + 0 ID=cds1283;Parent=gene1337;Dbxref=Genbank:WP_002209681.1;Name=WP_002209681.1;gbkey=CDS;product=polymerase;protein_id=WP_002209681.1;transl_table=11 NC_017265.1 RefSeq gene 1441424 1445250 . + . ID=gene1338;Name=YPC_RS06710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS06710;pseudo=true NC_017265.1 Protein Homology CDS 1441424 1445250 . + 0 ID=cds1284;Parent=gene1338;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type VI secretion protein IcmF;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1445544 1448129 . + . ID=gene1339;Name=YPC_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06715;old_locus_tag=YPC_1471 NC_017265.1 Protein Homology CDS 1445544 1448129 . + 0 ID=cds1285;Parent=gene1339;Dbxref=Genbank:WP_011055427.1;Name=WP_011055427.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_011055427.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1447790 1447889 . + . ID=id138;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 1447988 1448087 . + . ID=id139;gbkey=repeat_region NC_017265.1 RefSeq gene 1448228 1448488 . + . ID=gene1340;Name=YPC_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06720;old_locus_tag=YPC_1472 NC_017265.1 Protein Homology CDS 1448228 1448488 . + 0 ID=cds1286;Parent=gene1340;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11 NC_017265.1 RefSeq gene 1448494 1449336 . + . ID=gene1341;Name=YPC_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06725;old_locus_tag=YPC_1473 NC_017265.1 Protein Homology CDS 1448494 1449336 . + 0 ID=cds1287;Parent=gene1341;Dbxref=Genbank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354537.1;transl_table=11 NC_017265.1 RefSeq gene 1449356 1450162 . + . ID=gene1342;Name=YPC_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06730;old_locus_tag=YPC_1474 NC_017265.1 Protein Homology CDS 1449356 1450162 . + 0 ID=cds1288;Parent=gene1342;Dbxref=Genbank:WP_002209685.1;Name=WP_002209685.1;gbkey=CDS;product=ImpE family protein;protein_id=WP_002209685.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1450134 1450258 . + . ID=id140;gbkey=repeat_region NC_017265.1 RefSeq gene 1450307 1450786 . + . ID=gene1343;Name=YPC_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06735;old_locus_tag=YPC_1475 NC_017265.1 Protein Homology CDS 1450307 1450786 . + 0 ID=cds1289;Parent=gene1343;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11 NC_017265.1 RefSeq gene 1450811 1451158 . + . ID=gene1344;Name=YPC_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06740;old_locus_tag=YPC_1476 NC_017265.1 Protein Homology CDS 1450811 1451158 . + 0 ID=cds1290;Parent=gene1344;Dbxref=Genbank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209687.1;transl_table=11 NC_017265.1 RefSeq gene 1451233 1451574 . - . ID=gene1345;Name=YPC_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06745;old_locus_tag=YPC_1477 NC_017265.1 Protein Homology CDS 1451233 1451574 . - 0 ID=cds1291;Parent=gene1345;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11 NC_017265.1 RefSeq gene 1451950 1453989 . - . ID=gene1346;Name=YPC_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06750;old_locus_tag=YPC_1479 NC_017265.1 Protein Homology CDS 1451950 1453989 . - 0 ID=cds1292;Parent=gene1346;Dbxref=Genbank:WP_002209690.1;Name=WP_002209690.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209690.1;transl_table=11 NC_017265.1 RefSeq gene 1453994 1454536 . - . ID=gene1347;Name=YPC_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06755;old_locus_tag=YPC_1480 NC_017265.1 Protein Homology CDS 1453994 1454536 . - 0 ID=cds1293;Parent=gene1347;Dbxref=Genbank:WP_002209691.1;Name=WP_002209691.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209691.1;transl_table=11 NC_017265.1 RefSeq gene 1454823 1454897 . + . ID=gene1348;Name=YPC_RS06760;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS06760;old_locus_tag=YPC_1481 NC_017265.1 tRNAscan-SE tRNA 1454823 1454897 . + . ID=rna52;Parent=gene1348;anticodon=(pos:1454856..1454858);gbkey=tRNA;product=tRNA-Arg NC_017265.1 tRNAscan-SE exon 1454823 1454897 . + . ID=id141;Parent=rna52;anticodon=(pos:1454856..1454858);gbkey=tRNA;product=tRNA-Arg NC_017265.1 RefSeq gene 1455152 1455619 . + . ID=gene1349;Name=YPC_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06765;old_locus_tag=YPC_1483 NC_017265.1 Protein Homology CDS 1455152 1455619 . + 0 ID=cds1294;Parent=gene1349;Dbxref=Genbank:WP_002209692.1;Name=WP_002209692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209692.1;transl_table=11 NC_017265.1 RefSeq gene 1456064 1456720 . + . ID=gene1350;Name=YPC_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06770;old_locus_tag=YPC_1485 NC_017265.1 Protein Homology CDS 1456064 1456720 . + 0 ID=cds1295;Parent=gene1350;Dbxref=Genbank:WP_002209693.1;Name=WP_002209693.1;gbkey=CDS;product=cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=WP_002209693.1;transl_table=11 NC_017265.1 RefSeq gene 1456690 1457349 . + . ID=gene1351;Name=YPC_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06775;old_locus_tag=YPC_1486 NC_017265.1 Protein Homology CDS 1456690 1457349 . + 0 ID=cds1296;Parent=gene1351;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11 NC_017265.1 RefSeq gene 1457412 1458149 . + . ID=gene1352;Name=YPC_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06780;old_locus_tag=YPC_1487 NC_017265.1 Protein Homology CDS 1457412 1458149 . + 0 ID=cds1297;Parent=gene1352;Dbxref=Genbank:WP_002209695.1;Name=WP_002209695.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_002209695.1;transl_table=11 NC_017265.1 RefSeq gene 1458146 1458448 . + . ID=gene1353;Name=YPC_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06785;old_locus_tag=YPC_1488 NC_017265.1 Protein Homology CDS 1458146 1458448 . + 0 ID=cds1298;Parent=gene1353;Dbxref=Genbank:WP_002209696.1;Name=WP_002209696.1;gbkey=CDS;product=heme exporter protein D;protein_id=WP_002209696.1;transl_table=11 NC_017265.1 RefSeq gene 1458445 1458939 . + . ID=gene1354;Name=YPC_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06790 NC_017265.1 Protein Homology CDS 1458445 1458939 . + 0 ID=cds1299;Parent=gene1354;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11 NC_017265.1 RefSeq gene 1458936 1460906 . + . ID=gene1355;Name=YPC_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06795 NC_017265.1 Protein Homology CDS 1458936 1460906 . + 0 ID=cds1300;Parent=gene1355;Dbxref=Genbank:WP_002209698.1;Name=WP_002209698.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=heme lyase subunit CcmF;protein_id=WP_002209698.1;transl_table=11 NC_017265.1 RefSeq gene 1460903 1461460 . + . ID=gene1356;Name=YPC_RS06800;end_range=1461460,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS06800;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 1460903 1461460 . + 0 ID=cds1301;Parent=gene1356;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;end_range=1461460,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=disulfide bond formation protein DsbE;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1461465 1461977 . + . ID=gene1357;Name=YPC_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06805 NC_017265.1 Protein Homology CDS 1461465 1461977 . + 0 ID=cds1302;Parent=gene1357;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NC_017265.1 RefSeq gene 1461977 1463203 . + . ID=gene1358;Name=YPC_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06810 NC_017265.1 Protein Homology CDS 1461977 1463203 . + 0 ID=cds1303;Parent=gene1358;Dbxref=Genbank:WP_002209700.1;Name=WP_002209700.1;gbkey=CDS;product=cytochrome C;protein_id=WP_002209700.1;transl_table=11 NC_017265.1 RefSeq gene 1463239 1464003 . + . ID=gene1359;Name=YPC_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06815;old_locus_tag=YPC_1494 NC_017265.1 Protein Homology CDS 1463239 1464003 . + 0 ID=cds1304;Parent=gene1359;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11 NC_017265.1 RefSeq gene 1464110 1465375 . - . ID=gene1360;Name=YPC_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06820;old_locus_tag=YPC_1495 NC_017265.1 Protein Homology CDS 1464110 1465375 . - 0 ID=cds1305;Parent=gene1360;Dbxref=Genbank:WP_002209702.1;Name=WP_002209702.1;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=WP_002209702.1;transl_table=11 NC_017265.1 RefSeq gene 1465801 1466085 . + . ID=gene1361;Name=YPC_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06825;old_locus_tag=YPC_1496 NC_017265.1 Protein Homology CDS 1465801 1466085 . + 0 ID=cds1306;Parent=gene1361;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11 NC_017265.1 RefSeq gene 1466372 1467682 . + . ID=gene1362;Name=YPC_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06830;old_locus_tag=YPC_1497 NC_017265.1 Protein Homology CDS 1466372 1467682 . + 0 ID=cds1307;Parent=gene1362;Dbxref=Genbank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_002209704.1;transl_table=11 NC_017265.1 RefSeq gene 1467682 1470006 . + . ID=gene1363;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YPC_RS06835;old_locus_tag=YPC_1498 NC_017265.1 Protein Homology CDS 1467682 1470006 . + 0 ID=cds1308;Parent=gene1363;Dbxref=Genbank:WP_015683583.1;Name=WP_015683583.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty-acid oxidation protein subunit alpha;protein_id=WP_015683583.1;transl_table=11 NC_017265.1 RefSeq gene 1470575 1471066 . + . ID=gene1364;Name=YPC_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06840;old_locus_tag=YPC_1499 NC_017265.1 Protein Homology CDS 1470575 1471066 . + 0 ID=cds1309;Parent=gene1364;Dbxref=Genbank:WP_002209707.1;Name=WP_002209707.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_002209707.1;transl_table=11 NC_017265.1 RefSeq gene 1471142 1471255 . + . ID=gene1365;Name=YPC_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06845 NC_017265.1 Protein Homology CDS 1471142 1471255 . + 0 ID=cds1310;Parent=gene1365;Dbxref=Genbank:WP_042468383.1;Name=WP_042468383.1;gbkey=CDS;product=polyprotein;protein_id=WP_042468383.1;transl_table=11 NC_017265.1 RefSeq gene 1471420 1471950 . - . ID=gene1366;Name=YPC_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06850;old_locus_tag=YPC_1500 NC_017265.1 Protein Homology CDS 1471420 1471950 . - 0 ID=cds1311;Parent=gene1366;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11 NC_017265.1 RefSeq gene 1472320 1473252 . + . ID=gene1367;Name=YPC_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06855;old_locus_tag=YPC_1501 NC_017265.1 Protein Homology CDS 1472320 1473252 . + 0 ID=cds1312;Parent=gene1367;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NC_017265.1 RefSeq gene 1473329 1474414 . + . ID=gene1368;Name=YPC_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06860;old_locus_tag=YPC_1502 NC_017265.1 Protein Homology CDS 1473329 1474414 . + 0 ID=cds1313;Parent=gene1368;Dbxref=Genbank:WP_002209711.1;Name=WP_002209711.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NC_017265.1 RefSeq gene 1474420 1475247 . + . ID=gene1369;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YPC_RS06865;old_locus_tag=YPC_1503 NC_017265.1 Protein Homology CDS 1474420 1475247 . + 0 ID=cds1314;Parent=gene1369;Dbxref=Genbank:WP_002225365.1;Name=WP_002225365.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11 NC_017265.1 RefSeq gene 1475251 1476057 . + . ID=gene1370;Name=YPC_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06870;old_locus_tag=YPC_1504 NC_017265.1 Protein Homology CDS 1475251 1476057 . + 0 ID=cds1315;Parent=gene1370;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11 NC_017265.1 RefSeq gene 1476157 1476699 . + . ID=gene1371;Name=YPC_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06875;old_locus_tag=YPC_1506 NC_017265.1 Protein Homology CDS 1476157 1476699 . + 0 ID=cds1316;Parent=gene1371;Dbxref=Genbank:WP_002209714.1;Name=WP_002209714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209714.1;transl_table=11 NC_017265.1 RefSeq gene 1476757 1477035 . + . ID=gene1372;Name=YPC_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06880;old_locus_tag=YPC_1507 NC_017265.1 Protein Homology CDS 1476757 1477035 . + 0 ID=cds1317;Parent=gene1372;Dbxref=Genbank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209715.1;transl_table=11 NC_017265.1 RefSeq gene 1477213 1479282 . - . ID=gene1373;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=YPC_RS06885;old_locus_tag=YPC_1508 NC_017265.1 Protein Homology CDS 1477213 1479282 . - 0 ID=cds1318;Parent=gene1373;Dbxref=Genbank:WP_002209716.1;Name=WP_002209716.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_002209716.1;transl_table=11 NC_017265.1 RefSeq gene 1479454 1480677 . + . ID=gene1374;Name=YPC_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06890;old_locus_tag=YPC_1509 NC_017265.1 Protein Homology CDS 1479454 1480677 . + 0 ID=cds1319;Parent=gene1374;Dbxref=Genbank:WP_002209717.1;Name=WP_002209717.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002209717.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1480742 1480912 . + . ID=id142;gbkey=repeat_region NC_017265.1 RefSeq gene 1481085 1481777 . - . ID=gene1375;Name=YPC_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06895;old_locus_tag=YPC_1511 NC_017265.1 Protein Homology CDS 1481085 1481777 . - 0 ID=cds1320;Parent=gene1375;Dbxref=Genbank:WP_002209718.1;Name=WP_002209718.1;gbkey=CDS;product=racemase;protein_id=WP_002209718.1;transl_table=11 NC_017265.1 RefSeq gene 1482568 1483098 . + . ID=gene1376;Name=YPC_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06900;old_locus_tag=YPC_1513 NC_017265.1 Protein Homology CDS 1482568 1483098 . + 0 ID=cds1321;Parent=gene1376;Dbxref=Genbank:WP_002209720.1;Name=WP_002209720.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_002209720.1;transl_table=11 NC_017265.1 RefSeq gene 1483440 1484477 . - . ID=gene1377;Name=YPC_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06905;old_locus_tag=YPC_1514 NC_017265.1 Protein Homology CDS 1483440 1484477 . - 0 ID=cds1322;Parent=gene1377;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11 NC_017265.1 RefSeq gene 1484762 1485679 . - . ID=gene1378;Name=YPC_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06910;old_locus_tag=YPC_1515 NC_017265.1 Protein Homology CDS 1484762 1485679 . - 0 ID=cds1323;Parent=gene1378;Dbxref=Genbank:WP_002209722.1;Name=WP_002209722.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002209722.1;transl_table=11 NC_017265.1 RefSeq gene 1485757 1485918 . + . ID=gene1379;Name=YPC_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06915 NC_017265.1 Protein Homology CDS 1485757 1485918 . + 0 ID=cds1324;Parent=gene1379;Dbxref=Genbank:WP_002209723.1;Name=WP_002209723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209723.1;transl_table=11 NC_017265.1 RefSeq gene 1485905 1486690 . + . ID=gene1380;Name=YPC_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06920;old_locus_tag=YPC_1516 NC_017265.1 Protein Homology CDS 1485905 1486690 . + 0 ID=cds1325;Parent=gene1380;Dbxref=Genbank:WP_002209724.1;Name=WP_002209724.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209724.1;transl_table=11 NC_017265.1 RefSeq gene 1486737 1487864 . + . ID=gene1381;Name=YPC_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06925;old_locus_tag=YPC_1517 NC_017265.1 Protein Homology CDS 1486737 1487864 . + 0 ID=cds1326;Parent=gene1381;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11 NC_017265.1 RefSeq gene 1488034 1489044 . + . ID=gene1382;Name=YPC_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06930;old_locus_tag=YPC_1518 NC_017265.1 Protein Homology CDS 1488034 1489044 . + 0 ID=cds1327;Parent=gene1382;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NC_017265.1 RefSeq gene 1489095 1489925 . + . ID=gene1383;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=YPC_RS06935;old_locus_tag=YPC_1519 NC_017265.1 Protein Homology CDS 1489095 1489925 . + 0 ID=cds1328;Parent=gene1383;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11 NC_017265.1 RefSeq gene 1490082 1490744 . + . ID=gene1384;Name=YPC_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06940;old_locus_tag=YPC_1520 NC_017265.1 Protein Homology CDS 1490082 1490744 . + 0 ID=cds1329;Parent=gene1384;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11 NC_017265.1 RefSeq gene 1490975 1491889 . + . ID=gene1385;Name=YPC_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06945;old_locus_tag=YPC_1521 NC_017265.1 Protein Homology CDS 1490975 1491889 . + 0 ID=cds1330;Parent=gene1385;Dbxref=Genbank:WP_002209729.1;Name=WP_002209729.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NC_017265.1 RefSeq gene 1492138 1493442 . + . ID=gene1386;Name=YPC_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06950;old_locus_tag=YPC_1522 NC_017265.1 Protein Homology CDS 1492138 1493442 . + 0 ID=cds1331;Parent=gene1386;Dbxref=Genbank:WP_002209730.1;Name=WP_002209730.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NC_017265.1 RefSeq gene 1493562 1494284 . + . ID=gene1387;Name=YPC_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06955;old_locus_tag=YPC_1523 NC_017265.1 Protein Homology CDS 1493562 1494284 . + 0 ID=cds1332;Parent=gene1387;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NC_017265.1 RefSeq gene 1494596 1495105 . + . ID=gene1388;Name=YPC_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06960;old_locus_tag=YPC_1524 NC_017265.1 Protein Homology CDS 1494596 1495105 . + 0 ID=cds1333;Parent=gene1388;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NC_017265.1 RefSeq gene 1495118 1496635 . + . ID=gene1389;Name=YPC_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06965;old_locus_tag=YPC_1525 NC_017265.1 Protein Homology CDS 1495118 1496635 . + 0 ID=cds1334;Parent=gene1389;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NC_017265.1 RefSeq gene 1496882 1497454 . + . ID=gene1390;Name=YPC_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06970;old_locus_tag=YPC_1526 NC_017265.1 Protein Homology CDS 1496882 1497454 . + 0 ID=cds1335;Parent=gene1390;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11 NC_017265.1 RefSeq gene 1497979 1498761 . + . ID=gene1391;Name=YPC_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06975;old_locus_tag=YPC_1529 NC_017265.1 Protein Homology CDS 1497979 1498761 . + 0 ID=cds1336;Parent=gene1391;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11 NC_017265.1 RefSeq gene 1498864 1499550 . + . ID=gene1392;Name=YPC_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06980;old_locus_tag=YPC_1530 NC_017265.1 Protein Homology CDS 1498864 1499550 . + 0 ID=cds1337;Parent=gene1392;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NC_017265.1 RefSeq gene 1499547 1500263 . + . ID=gene1393;Name=YPC_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06985;old_locus_tag=YPC_1531 NC_017265.1 Protein Homology CDS 1499547 1500263 . + 0 ID=cds1338;Parent=gene1393;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11 NC_017265.1 RefSeq gene 1500277 1501074 . + . ID=gene1394;Name=YPC_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06990;old_locus_tag=YPC_1532 NC_017265.1 Protein Homology CDS 1500277 1501074 . + 0 ID=cds1339;Parent=gene1394;Dbxref=Genbank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_002209738.1;transl_table=11 NC_017265.1 RefSeq gene 1501197 1502105 . - . ID=gene1395;Name=YPC_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS06995;old_locus_tag=YPC_1533 NC_017265.1 Protein Homology CDS 1501197 1502105 . - 0 ID=cds1340;Parent=gene1395;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11 NC_017265.1 RefSeq gene 1502459 1503151 . + . ID=gene1396;Name=YPC_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07000;old_locus_tag=YPC_1534 NC_017265.1 Protein Homology CDS 1502459 1503151 . + 0 ID=cds1341;Parent=gene1396;Dbxref=Genbank:WP_002209740.1;Name=WP_002209740.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_002209740.1;transl_table=11 NC_017265.1 RefSeq gene 1503339 1503926 . + . ID=gene1397;Name=YPC_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07005;old_locus_tag=YPC_1535 NC_017265.1 Protein Homology CDS 1503339 1503926 . + 0 ID=cds1342;Parent=gene1397;Dbxref=Genbank:WP_002225358.1;Name=WP_002225358.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002225358.1;transl_table=11 NC_017265.1 RefSeq gene 1504148 1504696 . + . ID=gene1398;Name=YPC_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07010;old_locus_tag=YPC_1537 NC_017265.1 Protein Homology CDS 1504148 1504696 . + 0 ID=cds1343;Parent=gene1398;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11 NC_017265.1 RefSeq gene 1504813 1506069 . - . ID=gene1399;Name=YPC_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07015;old_locus_tag=YPC_1538 NC_017265.1 Protein Homology CDS 1504813 1506069 . - 0 ID=cds1344;Parent=gene1399;Dbxref=Genbank:WP_002222248.1;Name=WP_002222248.1;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;protein_id=WP_002222248.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1506136 1507454 . + . ID=id143;gbkey=repeat_region NC_017265.1 RefSeq gene 1506209 1507417 . + . ID=gene1400;Name=YPC_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07020;old_locus_tag=YPC_1539 NC_017265.1 Protein Homology CDS 1506209 1507417 . + 0 ID=cds1345;Parent=gene1400;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 1507439 1507693 . - . ID=gene1401;Name=YPC_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07025;old_locus_tag=YPC_1540 NC_017265.1 Protein Homology CDS 1507439 1507693 . - 0 ID=cds1346;Parent=gene1401;Dbxref=Genbank:WP_002210293.1;Name=WP_002210293.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002210293.1;transl_table=11 NC_017265.1 RefSeq gene 1507862 1508305 . - . ID=gene1402;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=YPC_RS07030;old_locus_tag=YPC_1542 NC_017265.1 Protein Homology CDS 1507862 1508305 . - 0 ID=cds1347;Parent=gene1402;Dbxref=Genbank:WP_002210291.1;Name=WP_002210291.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_002210291.1;transl_table=11 NC_017265.1 RefSeq gene 1508672 1509706 . + . ID=gene1403;Name=YPC_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07035;old_locus_tag=YPC_1543 NC_017265.1 Protein Homology CDS 1508672 1509706 . + 0 ID=cds1348;Parent=gene1403;Dbxref=Genbank:WP_002216059.1;Name=WP_002216059.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002216059.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1509788 1509958 . + . ID=id144;gbkey=repeat_region NC_017265.1 RefSeq gene 1509972 1512110 . - . ID=gene1404;Name=YPC_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07040;old_locus_tag=YPC_1545 NC_017265.1 Protein Homology CDS 1509972 1512110 . - 0 ID=cds1349;Parent=gene1404;Dbxref=Genbank:WP_002265141.1;Name=WP_002265141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NC_017265.1 RefSeq gene 1512293 1513495 . - . ID=gene1405;Name=YPC_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07045;old_locus_tag=YPC_1547 NC_017265.1 Protein Homology CDS 1512293 1513495 . - 0 ID=cds1350;Parent=gene1405;Dbxref=Genbank:WP_002210288.1;Name=WP_002210288.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_002210288.1;transl_table=11 NC_017265.1 RefSeq gene 1513485 1513676 . - . ID=gene1406;Name=YPC_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07050;old_locus_tag=YPC_1548 NC_017265.1 Protein Homology CDS 1513485 1513676 . - 0 ID=cds1351;Parent=gene1406;Dbxref=Genbank:WP_002216055.1;Name=WP_002216055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216055.1;transl_table=11 NC_017265.1 RefSeq gene 1513917 1514372 . + . ID=gene1407;Name=YPC_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07055;old_locus_tag=YPC_1549 NC_017265.1 Protein Homology CDS 1513917 1514372 . + 0 ID=cds1352;Parent=gene1407;Dbxref=Genbank:WP_002210287.1;Name=WP_002210287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210287.1;transl_table=11 NC_017265.1 RefSeq gene 1514680 1515174 . + . ID=gene1408;Name=YPC_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07060;old_locus_tag=YPC_1550 NC_017265.1 Protein Homology CDS 1514680 1515174 . + 0 ID=cds1353;Parent=gene1408;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11 NC_017265.1 RefSeq gene 1515339 1515995 . + . ID=gene1409;Name=YPC_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07065;old_locus_tag=YPC_1551 NC_017265.1 Protein Homology CDS 1515339 1515995 . + 0 ID=cds1354;Parent=gene1409;Dbxref=Genbank:WP_002210285.1;Name=WP_002210285.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210285.1;transl_table=11 NC_017265.1 RefSeq gene 1516287 1518119 . + . ID=gene1410;Name=YPC_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07070;old_locus_tag=YPC_1552 NC_017265.1 Protein Homology CDS 1516287 1518119 . + 0 ID=cds1355;Parent=gene1410;Dbxref=Genbank:WP_002227880.1;Name=WP_002227880.1;gbkey=CDS;product=citrate transporter;protein_id=WP_002227880.1;transl_table=11 NC_017265.1 RefSeq gene 1518224 1518415 . + . ID=gene1411;Name=YPC_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07075 NC_017265.1 Protein Homology CDS 1518224 1518415 . + 0 ID=cds1356;Parent=gene1411;Dbxref=Genbank:WP_002216053.1;Name=WP_002216053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216053.1;transl_table=11 NC_017265.1 RefSeq gene 1518462 1519055 . - . ID=gene1412;Name=YPC_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07080;old_locus_tag=YPC_1554 NC_017265.1 Protein Homology CDS 1518462 1519055 . - 0 ID=cds1357;Parent=gene1412;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11 NC_017265.1 RefSeq gene 1519206 1520420 . - . ID=gene1413;Name=YPC_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07085;old_locus_tag=YPC_1556 NC_017265.1 Protein Homology CDS 1519206 1520420 . - 0 ID=cds1358;Parent=gene1413;Dbxref=Genbank:WP_002210282.1;Name=WP_002210282.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=WP_002210282.1;transl_table=11 NC_017265.1 RefSeq gene 1520553 1520825 . + . ID=gene1414;Name=YPC_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07090 NC_017265.1 Protein Homology CDS 1520553 1520825 . + 0 ID=cds1359;Parent=gene1414;Dbxref=Genbank:WP_002217838.1;Name=WP_002217838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217838.1;transl_table=11 NC_017265.1 RefSeq gene 1521276 1522208 . + . ID=gene1415;Name=YPC_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07095;old_locus_tag=YPC_1558 NC_017265.1 Protein Homology CDS 1521276 1522208 . + 0 ID=cds1360;Parent=gene1415;Dbxref=Genbank:WP_002210280.1;Name=WP_002210280.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210280.1;transl_table=11 NC_017265.1 RefSeq gene 1522886 1523386 . + . ID=gene1416;Name=YPC_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07100;old_locus_tag=YPC_1560 NC_017265.1 Protein Homology CDS 1522886 1523386 . + 0 ID=cds1361;Parent=gene1416;Dbxref=Genbank:WP_002210279.1;Name=WP_002210279.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NC_017265.1 RefSeq gene 1523488 1524165 . + . ID=gene1417;Name=YPC_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07105;old_locus_tag=YPC_1561 NC_017265.1 Protein Homology CDS 1523488 1524165 . + 0 ID=cds1362;Parent=gene1417;Dbxref=Genbank:WP_002210278.1;Name=WP_002210278.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002210278.1;transl_table=11 NC_017265.1 RefSeq gene 1524306 1526102 . + . ID=gene1418;Name=YPC_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07110;old_locus_tag=YPC_1562 NC_017265.1 Protein Homology CDS 1524306 1526102 . + 0 ID=cds1363;Parent=gene1418;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NC_017265.1 RefSeq gene 1526105 1526668 . + . ID=gene1419;Name=YPC_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07115;old_locus_tag=YPC_1563 NC_017265.1 Protein Homology CDS 1526105 1526668 . + 0 ID=cds1364;Parent=gene1419;Dbxref=Genbank:WP_002228514.1;Name=WP_002228514.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_002228514.1;transl_table=11 NC_017265.1 RefSeq gene 1526665 1528050 . + . ID=gene1420;Name=YPC_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07120;old_locus_tag=YPC_1564 NC_017265.1 Protein Homology CDS 1526665 1528050 . + 0 ID=cds1365;Parent=gene1420;Dbxref=Genbank:WP_002210276.1;Name=WP_002210276.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_002210276.1;transl_table=11 NC_017265.1 RefSeq gene 1528137 1530881 . + . ID=gene1421;Name=YPC_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07125;old_locus_tag=YPC_1565 NC_017265.1 Protein Homology CDS 1528137 1530881 . + 0 ID=cds1366;Parent=gene1421;Dbxref=Genbank:WP_002210275.1;Name=WP_002210275.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_002210275.1;transl_table=11 NC_017265.1 RefSeq gene 1530878 1531855 . + . ID=gene1422;Name=YPC_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07130;old_locus_tag=YPC_1566 NC_017265.1 Protein Homology CDS 1530878 1531855 . + 0 ID=cds1367;Parent=gene1422;Dbxref=Genbank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_002210274.1;transl_table=11 NC_017265.1 RefSeq gene 1531870 1532412 . + . ID=gene1423;Name=YPC_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07135;old_locus_tag=YPC_1567 NC_017265.1 Protein Homology CDS 1531870 1532412 . + 0 ID=cds1368;Parent=gene1423;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11 NC_017265.1 RefSeq gene 1532425 1532970 . + . ID=gene1424;Name=YPC_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07140;old_locus_tag=YPC_1568 NC_017265.1 Protein Homology CDS 1532425 1532970 . + 0 ID=cds1369;Parent=gene1424;Dbxref=Genbank:WP_002210272.1;Name=WP_002210272.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NC_017265.1 RefSeq gene 1532967 1533269 . + . ID=gene1425;Name=YPC_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07145;old_locus_tag=YPC_1569 NC_017265.1 Protein Homology CDS 1532967 1533269 . + 0 ID=cds1370;Parent=gene1425;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11 NC_017265.1 RefSeq gene 1533266 1535110 . + . ID=gene1426;Name=YPC_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07150;old_locus_tag=YPC_1570 NC_017265.1 Protein Homology CDS 1533266 1535110 . + 0 ID=cds1371;Parent=gene1426;Dbxref=Genbank:WP_002210270.1;Name=WP_002210270.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_002210270.1;transl_table=11 NC_017265.1 RefSeq gene 1535150 1536682 . + . ID=gene1427;Name=YPC_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07155;old_locus_tag=YPC_1571 NC_017265.1 Protein Homology CDS 1535150 1536682 . + 0 ID=cds1372;Parent=gene1427;Dbxref=Genbank:WP_002210269.1;Name=WP_002210269.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NC_017265.1 RefSeq gene 1536689 1538152 . + . ID=gene1428;Name=YPC_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07160;old_locus_tag=YPC_1572 NC_017265.1 Protein Homology CDS 1536689 1538152 . + 0 ID=cds1373;Parent=gene1428;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11 NC_017265.1 RefSeq gene 1538388 1539578 . + . ID=gene1429;Name=YPC_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07165;old_locus_tag=YPC_1573 NC_017265.1 Protein Homology CDS 1538388 1539578 . + 0 ID=cds1374;Parent=gene1429;Dbxref=Genbank:WP_002210267.1;Name=WP_002210267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210267.1;transl_table=11 NC_017265.1 RefSeq gene 1539939 1540406 . - . ID=gene1430;Name=YPC_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07170;old_locus_tag=YPC_1574 NC_017265.1 Protein Homology CDS 1539939 1540406 . - 0 ID=cds1375;Parent=gene1430;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11 NC_017265.1 RefSeq gene 1540484 1541020 . - . ID=gene1431;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPC_RS07175;old_locus_tag=YPC_1575 NC_017265.1 Protein Homology CDS 1540484 1541020 . - 0 ID=cds1376;Parent=gene1431;Dbxref=Genbank:WP_002210265.1;Name=WP_002210265.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_002210265.1;transl_table=11 NC_017265.1 RefSeq gene 1541069 1541833 . - . ID=gene1432;Name=YPC_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07180;old_locus_tag=YPC_1576 NC_017265.1 Protein Homology CDS 1541069 1541833 . - 0 ID=cds1377;Parent=gene1432;Dbxref=Genbank:WP_002210264.1;Name=WP_002210264.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_002210264.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1541862 1542039 . + . ID=id145;gbkey=repeat_region NC_017265.1 RefSeq gene 1542592 1543875 . - . ID=gene1433;Name=YPC_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07185;old_locus_tag=YPC_1579 NC_017265.1 Protein Homology CDS 1542592 1543875 . - 0 ID=cds1378;Parent=gene1433;Dbxref=Genbank:WP_002210262.1;Name=WP_002210262.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210262.1;transl_table=11 NC_017265.1 RefSeq gene 1544344 1545336 . + . ID=gene1434;Name=YPC_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07190;old_locus_tag=YPC_1580 NC_017265.1 Protein Homology CDS 1544344 1545336 . + 0 ID=cds1379;Parent=gene1434;Dbxref=Genbank:WP_002210260.1;Name=WP_002210260.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210260.1;transl_table=11 NC_017265.1 RefSeq gene 1545661 1545783 . + . ID=gene1435;Name=YPC_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07195;old_locus_tag=YPC_1581 NC_017265.1 Protein Homology CDS 1545661 1545783 . + 0 ID=cds1380;Parent=gene1435;Dbxref=Genbank:WP_002210258.1;Name=WP_002210258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210258.1;transl_table=11 NC_017265.1 RefSeq gene 1545802 1546752 . + . ID=gene1436;Name=YPC_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07200;old_locus_tag=YPC_1582 NC_017265.1 Protein Homology CDS 1545802 1546752 . + 0 ID=cds1381;Parent=gene1436;Dbxref=Genbank:WP_002210257.1;Name=WP_002210257.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002210257.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1546773 1546945 . + . ID=id146;gbkey=repeat_region NC_017265.1 RefSeq gene 1547298 1548614 . + . ID=gene1437;Name=YPC_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07205;old_locus_tag=YPC_1584 NC_017265.1 Protein Homology CDS 1547298 1548614 . + 0 ID=cds1382;Parent=gene1437;Dbxref=Genbank:WP_002215889.1;Name=WP_002215889.1;gbkey=CDS;product=2-ketogluconate transporter;protein_id=WP_002215889.1;transl_table=11 NC_017265.1 RefSeq gene 1548644 1549159 . + . ID=gene1438;Name=YPC_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07210;old_locus_tag=YPC_1585 NC_017265.1 Protein Homology CDS 1548644 1549159 . + 0 ID=cds1383;Parent=gene1438;Dbxref=Genbank:WP_002210255.1;Name=WP_002210255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210255.1;transl_table=11 NC_017265.1 RefSeq gene 1549169 1551040 . + . ID=gene1439;Name=YPC_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07215;old_locus_tag=YPC_1586 NC_017265.1 Protein Homology CDS 1549169 1551040 . + 0 ID=cds1384;Parent=gene1439;Dbxref=Genbank:WP_002210254.1;Name=WP_002210254.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_002210254.1;transl_table=11 NC_017265.1 RefSeq gene 1551106 1551318 . + . ID=gene1440;Name=YPC_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07220;old_locus_tag=YPC_1587 NC_017265.1 Protein Homology CDS 1551106 1551318 . + 0 ID=cds1385;Parent=gene1440;Dbxref=Genbank:WP_002215888.1;Name=WP_002215888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215888.1;transl_table=11 NC_017265.1 RefSeq gene 1551259 1551402 . - . ID=gene1441;Name=YPC_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07225 NC_017265.1 Protein Homology CDS 1551259 1551402 . - 0 ID=cds1386;Parent=gene1441;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11 NC_017265.1 RefSeq gene 1551966 1552274 . + . ID=gene1442;Name=YPC_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07230;old_locus_tag=YPC_1590 NC_017265.1 Protein Homology CDS 1551966 1552274 . + 0 ID=cds1387;Parent=gene1442;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11 NC_017265.1 RefSeq gene 1552829 1553473 . + . ID=gene1443;Name=YPC_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07235;old_locus_tag=YPC_1592 NC_017265.1 Protein Homology CDS 1552829 1553473 . + 0 ID=cds1388;Parent=gene1443;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11 NC_017265.1 RefSeq gene 1554001 1555368 . + . ID=gene1444;Name=YPC_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07240;old_locus_tag=YPC_1593 NC_017265.1 Protein Homology CDS 1554001 1555368 . + 0 ID=cds1389;Parent=gene1444;Dbxref=Genbank:WP_002210248.1;Name=WP_002210248.1;gbkey=CDS;product=menaquinone-specific isochorismate synthase;protein_id=WP_002210248.1;transl_table=11 NC_017265.1 RefSeq gene 1555811 1557298 . + . ID=gene1445;Name=YPC_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07245;old_locus_tag=YPC_1594 NC_017265.1 Protein Homology CDS 1555811 1557298 . + 0 ID=cds1390;Parent=gene1445;Dbxref=Genbank:WP_002403930.1;Name=WP_002403930.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_002403930.1;transl_table=11 NC_017265.1 RefSeq gene 1557295 1558113 . + . ID=gene1446;Name=YPC_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07250;old_locus_tag=YPC_1595 NC_017265.1 Protein Homology CDS 1557295 1558113 . + 0 ID=cds1391;Parent=gene1446;Dbxref=Genbank:WP_002210246.1;Name=WP_002210246.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002210246.1;transl_table=11 NC_017265.1 RefSeq gene 1558127 1558984 . + . ID=gene1447;Name=YPC_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07255;old_locus_tag=YPC_1596 NC_017265.1 Protein Homology CDS 1558127 1558984 . + 0 ID=cds1392;Parent=gene1447;Dbxref=Genbank:WP_002210245.1;Name=WP_002210245.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=naphthoate synthase;protein_id=WP_002210245.1;transl_table=11 NC_017265.1 RefSeq gene 1558984 1559955 . + . ID=gene1448;Name=YPC_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07260;old_locus_tag=YPC_1597 NC_017265.1 Protein Homology CDS 1558984 1559955 . + 0 ID=cds1393;Parent=gene1448;Dbxref=Genbank:WP_002210244.1;Name=WP_002210244.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_002210244.1;transl_table=11 NC_017265.1 RefSeq gene 1559943 1561358 . + . ID=gene1449;Name=YPC_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07265;old_locus_tag=YPC_1598 NC_017265.1 Protein Homology CDS 1559943 1561358 . + 0 ID=cds1394;Parent=gene1449;Dbxref=Genbank:WP_002210243.1;Name=WP_002210243.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_002210243.1;transl_table=11 NC_017265.1 RefSeq gene 1561424 1562383 . + . ID=gene1450;Name=YPC_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07270;old_locus_tag=YPC_1599 NC_017265.1 Protein Homology CDS 1561424 1562383 . + 0 ID=cds1395;Parent=gene1450;Dbxref=Genbank:WP_002210242.1;Name=WP_002210242.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210242.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1562428 1562601 . + . ID=id147;gbkey=repeat_region NC_017265.1 RefSeq gene 1562765 1563025 . - . ID=gene1451;Name=YPC_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07275;old_locus_tag=YPC_1602 NC_017265.1 Protein Homology CDS 1562765 1563025 . - 0 ID=cds1396;Parent=gene1451;Dbxref=Genbank:WP_002210240.1;Name=WP_002210240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210240.1;transl_table=11 NC_017265.1 RefSeq gene 1563313 1564323 . + . ID=gene1452;Name=YPC_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07280;old_locus_tag=YPC_1603 NC_017265.1 Protein Homology CDS 1563313 1564323 . + 0 ID=cds1397;Parent=gene1452;Dbxref=Genbank:WP_002210239.1;Name=WP_002210239.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_002210239.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1564840 1565014 . + . ID=id148;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 1565117 1567074 . + . ID=id149;gbkey=repeat_region NC_017265.1 RefSeq gene 1565185 1565964 . - . ID=gene1453;Name=YPC_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07285;old_locus_tag=YPC_1606 NC_017265.1 Protein Homology CDS 1565185 1565964 . - 0 ID=cds1398;Parent=gene1453;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 1565964 1566986 . - . ID=gene1454;Name=YPC_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07290;old_locus_tag=YPC_1607 NC_017265.1 Protein Homology CDS 1565964 1566986 . - 0 ID=cds1399;Parent=gene1454;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 1567095 1568342 . + . ID=gene1455;Name=YPC_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07295;old_locus_tag=YPC_1608 NC_017265.1 Protein Homology CDS 1567095 1568342 . + 0 ID=cds1400;Parent=gene1455;Dbxref=Genbank:WP_002227884.1;Name=WP_002227884.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002227884.1;transl_table=11 NC_017265.1 RefSeq gene 1568582 1569304 . - . ID=gene1456;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YPC_RS07300;old_locus_tag=YPC_1609 NC_017265.1 Protein Homology CDS 1568582 1569304 . - 0 ID=cds1401;Parent=gene1456;Dbxref=Genbank:WP_002210237.1;Name=WP_002210237.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_002210237.1;transl_table=11 NC_017265.1 RefSeq gene 1569301 1569957 . - . ID=gene1457;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YPC_RS07305;old_locus_tag=YPC_1610 NC_017265.1 Protein Homology CDS 1569301 1569957 . - 0 ID=cds1402;Parent=gene1457;Dbxref=Genbank:WP_002210236.1;Name=WP_002210236.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_002210236.1;transl_table=11 NC_017265.1 RefSeq gene 1569992 1570735 . - . ID=gene1458;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YPC_RS07310;old_locus_tag=YPC_1611 NC_017265.1 Protein Homology CDS 1569992 1570735 . - 0 ID=cds1403;Parent=gene1458;Dbxref=Genbank:WP_002210235.1;Name=WP_002210235.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-binding protein;protein_id=WP_002210235.1;transl_table=11 NC_017265.1 RefSeq gene 1571305 1572432 . - . ID=gene1459;Name=YPC_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07315;old_locus_tag=YPC_1612 NC_017265.1 Protein Homology CDS 1571305 1572432 . - 0 ID=cds1404;Parent=gene1459;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11 NC_017265.1 RefSeq gene 1572752 1573255 . - . ID=gene1460;Name=YPC_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07320;old_locus_tag=YPC_1613 NC_017265.1 Protein Homology CDS 1572752 1573255 . - 0 ID=cds1405;Parent=gene1460;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11 NC_017265.1 RefSeq gene 1573512 1574289 . - . ID=gene1461;Name=YPC_RS07325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS07325;pseudo=true NC_017265.1 Protein Homology CDS 1573512 1574289 . - 0 ID=cds1406;Parent=gene1461;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=trans-aconitate methyltransferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1574312 1574809 . - . ID=gene1462;Name=YPC_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07330;old_locus_tag=YPC_1616 NC_017265.1 Protein Homology CDS 1574312 1574809 . - 0 ID=cds1407;Parent=gene1462;Dbxref=Genbank:WP_002210231.1;Name=WP_002210231.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002210231.1;transl_table=11 NC_017265.1 RefSeq gene 1574825 1575712 . - . ID=gene1463;Name=YPC_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07335;old_locus_tag=YPC_1617 NC_017265.1 Protein Homology CDS 1574825 1575712 . - 0 ID=cds1408;Parent=gene1463;Dbxref=Genbank:WP_015683588.1;Name=WP_015683588.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_015683588.1;transl_table=11 NC_017265.1 RefSeq gene 1576117 1576641 . + . ID=gene1464;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YPC_RS07340;old_locus_tag=YPC_1619 NC_017265.1 Protein Homology CDS 1576117 1576641 . + 0 ID=cds1409;Parent=gene1464;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11 NC_017265.1 RefSeq gene 1576957 1577895 . + . ID=gene1465;Name=YPC_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07345;old_locus_tag=YPC_1620 NC_017265.1 Protein Homology CDS 1576957 1577895 . + 0 ID=cds1410;Parent=gene1465;Dbxref=Genbank:WP_002210228.1;Name=WP_002210228.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_002210228.1;transl_table=11 NC_017265.1 RefSeq gene 1578133 1578675 . + . ID=gene1466;Name=YPC_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07350;old_locus_tag=YPC_1621 NC_017265.1 Protein Homology CDS 1578133 1578675 . + 0 ID=cds1411;Parent=gene1466;Dbxref=Genbank:WP_002210227.1;Name=WP_002210227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210227.1;transl_table=11 NC_017265.1 RefSeq gene 1578871 1579539 . + . ID=gene1467;Name=YPC_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07355;old_locus_tag=YPC_1622 NC_017265.1 Protein Homology CDS 1578871 1579539 . + 0 ID=cds1412;Parent=gene1467;Dbxref=Genbank:WP_002210225.1;Name=WP_002210225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210225.1;transl_table=11 NC_017265.1 RefSeq gene 1580281 1581348 . + . ID=gene1468;Name=YPC_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07360;old_locus_tag=YPC_1623 NC_017265.1 Protein Homology CDS 1580281 1581348 . + 0 ID=cds1413;Parent=gene1468;Dbxref=Genbank:WP_002210224.1;Name=WP_002210224.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002210224.1;transl_table=11 NC_017265.1 RefSeq gene 1581523 1582440 . + . ID=gene1469;Name=YPC_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07365;old_locus_tag=YPC_1624 NC_017265.1 Protein Homology CDS 1581523 1582440 . + 0 ID=cds1414;Parent=gene1469;Dbxref=Genbank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210223.1;transl_table=11 NC_017265.1 RefSeq gene 1582480 1583970 . + . ID=gene1470;Name=YPC_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07370;old_locus_tag=YPC_1625 NC_017265.1 Protein Homology CDS 1582480 1583970 . + 0 ID=cds1415;Parent=gene1470;Dbxref=Genbank:WP_002210222.1;Name=WP_002210222.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210222.1;transl_table=11 NC_017265.1 RefSeq gene 1583967 1584959 . + . ID=gene1471;Name=YPC_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07375;old_locus_tag=YPC_1626 NC_017265.1 Protein Homology CDS 1583967 1584959 . + 0 ID=cds1416;Parent=gene1471;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NC_017265.1 RefSeq gene 1585092 1586096 . - . ID=gene1472;Name=YPC_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07380;old_locus_tag=YPC_1627 NC_017265.1 Protein Homology CDS 1585092 1586096 . - 0 ID=cds1417;Parent=gene1472;Dbxref=Genbank:WP_002210220.1;Name=WP_002210220.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210220.1;transl_table=11 NC_017265.1 RefSeq gene 1586343 1587284 . - . ID=gene1473;Name=YPC_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07385;old_locus_tag=YPC_1628 NC_017265.1 Protein Homology CDS 1586343 1587284 . - 0 ID=cds1418;Parent=gene1473;Dbxref=Genbank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210219.1;transl_table=11 NC_017265.1 RefSeq gene 1587387 1588472 . + . ID=gene1474;Name=YPC_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07390;old_locus_tag=YPC_1629 NC_017265.1 Protein Homology CDS 1587387 1588472 . + 0 ID=cds1419;Parent=gene1474;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1588507 1588682 . + . ID=id150;gbkey=repeat_region NC_017265.1 RefSeq gene 1588541 1588723 . + . ID=gene1475;Name=YPC_RS07395;gbkey=Gene;gene_biotype=other;locus_tag=YPC_RS07395 NC_017265.1 RefSeq gene 1589089 1590735 . + . ID=gene1476;Name=YPC_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07400;old_locus_tag=YPC_1631 NC_017265.1 Protein Homology CDS 1589089 1590735 . + 0 ID=cds1420;Parent=gene1476;Dbxref=Genbank:WP_015683589.1;Name=WP_015683589.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_015683589.1;transl_table=11 NC_017265.1 RefSeq gene 1590852 1591905 . + . ID=gene1477;Name=YPC_RS07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS07405;pseudo=true NC_017265.1 Protein Homology CDS 1590852 1591905 . + 0 ID=cds1421;Parent=gene1477;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dioxygenase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1592001 1592966 . + . ID=gene1478;Name=YPC_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07410;old_locus_tag=YPC_1634 NC_017265.1 Protein Homology CDS 1592001 1592966 . + 0 ID=cds1422;Parent=gene1478;Dbxref=Genbank:WP_002213817.1;Name=WP_002213817.1;gbkey=CDS;product=dioxygenase subunit beta;protein_id=WP_002213817.1;transl_table=11 NC_017265.1 RefSeq gene 1593619 1595307 . + . ID=gene1479;Name=YPC_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07415;old_locus_tag=YPC_1635 NC_017265.1 Protein Homology CDS 1593619 1595307 . + 0 ID=cds1423;Parent=gene1479;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11 NC_017265.1 RefSeq gene 1595463 1603059 . + . ID=gene1480;Name=YPC_RS07420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS07420;pseudo=true NC_017265.1 Protein Homology CDS 1595463 1603059 . + 0 ID=cds1424;Parent=gene1480;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemagglutinin;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 1601120 1602450 . + . ID=id151;gbkey=repeat_region NC_017265.1 RefSeq gene 1603061 1603570 . + . ID=gene1481;Name=YPC_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07425;old_locus_tag=YPC_1638 NC_017265.1 Protein Homology CDS 1603061 1603570 . + 0 ID=cds1425;Parent=gene1481;Dbxref=Genbank:WP_002210211.1;Name=WP_002210211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210211.1;transl_table=11 NC_017265.1 RefSeq gene 1603815 1604066 . + . ID=gene1482;Name=YPC_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07430;old_locus_tag=YPC_1639 NC_017265.1 Protein Homology CDS 1603815 1604066 . + 0 ID=cds1426;Parent=gene1482;Dbxref=Genbank:WP_002213821.1;Name=WP_002213821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213821.1;transl_table=11 NC_017265.1 RefSeq gene 1604207 1604554 . + . ID=gene1483;Name=YPC_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07435 NC_017265.1 Protein Homology CDS 1604207 1604554 . + 0 ID=cds1427;Parent=gene1483;Dbxref=Genbank:WP_016256369.1;Name=WP_016256369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256369.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1604677 1606158 . + . ID=id152;gbkey=repeat_region NC_017265.1 RefSeq gene 1604730 1606763 . + . ID=gene1484;Name=YPC_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07440;old_locus_tag=YPC_1640 NC_017265.1 Protein Homology CDS 1604730 1606763 . + 0 ID=cds1428;Parent=gene1484;Dbxref=Genbank:WP_002213825.1;Name=WP_002213825.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002213825.1;transl_table=11 NC_017265.1 RefSeq gene 1606773 1606970 . + . ID=gene1485;Name=YPC_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07445;old_locus_tag=YPC_1641 NC_017265.1 Protein Homology CDS 1606773 1606970 . + 0 ID=cds1429;Parent=gene1485;Dbxref=Genbank:WP_002210208.1;Name=WP_002210208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210208.1;transl_table=11 NC_017265.1 RefSeq gene 1607173 1607340 . + . ID=gene1486;Name=YPC_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07450;old_locus_tag=YPC_1642 NC_017265.1 Protein Homology CDS 1607173 1607340 . + 0 ID=cds1430;Parent=gene1486;Dbxref=Genbank:WP_002213827.1;Name=WP_002213827.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213827.1;transl_table=11 NC_017265.1 RefSeq gene 1607482 1607886 . + . ID=gene1487;Name=YPC_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07455;old_locus_tag=YPC_1643 NC_017265.1 Protein Homology CDS 1607482 1607886 . + 0 ID=cds1431;Parent=gene1487;Dbxref=Genbank:WP_002213829.1;Name=WP_002213829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213829.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1608027 1608277 . + . ID=id153;gbkey=repeat_region NC_017265.1 RefSeq gene 1608046 1608438 . + . ID=gene1488;Name=YPC_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07460;old_locus_tag=YPC_1645 NC_017265.1 Protein Homology CDS 1608046 1608438 . + 0 ID=cds1432;Parent=gene1488;Dbxref=Genbank:WP_002213832.1;Name=WP_002213832.1;gbkey=CDS;product=adhesin;protein_id=WP_002213832.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1608431 1608599 . + . ID=id154;gbkey=repeat_region NC_017265.1 RefSeq gene 1608789 1609241 . + . ID=gene1489;Name=YPC_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07465;old_locus_tag=YPC_1647 NC_017265.1 Protein Homology CDS 1608789 1609241 . + 0 ID=cds1433;Parent=gene1489;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NC_017265.1 RefSeq gene 1609507 1610586 . - . ID=gene1490;Name=YPC_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07470;old_locus_tag=YPC_1648 NC_017265.1 Protein Homology CDS 1609507 1610586 . - 0 ID=cds1434;Parent=gene1490;Dbxref=Genbank:WP_002210202.1;Name=WP_002210202.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210202.1;transl_table=11 NC_017265.1 RefSeq gene 1610686 1612074 . - . ID=gene1491;Name=YPC_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07475;old_locus_tag=YPC_1649 NC_017265.1 Protein Homology CDS 1610686 1612074 . - 0 ID=cds1435;Parent=gene1491;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11 NC_017265.1 RefSeq gene 1612091 1613131 . - . ID=gene1492;Name=YPC_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07480;old_locus_tag=YPC_1650 NC_017265.1 Protein Homology CDS 1612091 1613131 . - 0 ID=cds1436;Parent=gene1492;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NC_017265.1 RefSeq gene 1613403 1614689 . + . ID=gene1493;Name=YPC_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07485;old_locus_tag=YPC_1651 NC_017265.1 Protein Homology CDS 1613403 1614689 . + 0 ID=cds1437;Parent=gene1493;Dbxref=Genbank:WP_002210199.1;Name=WP_002210199.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002210199.1;transl_table=11 NC_017265.1 RefSeq gene 1614798 1615673 . + . ID=gene1494;Name=YPC_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07490;old_locus_tag=YPC_1652 NC_017265.1 Protein Homology CDS 1614798 1615673 . + 0 ID=cds1438;Parent=gene1494;Dbxref=Genbank:WP_002210198.1;Name=WP_002210198.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210198.1;transl_table=11 NC_017265.1 RefSeq gene 1615674 1616498 . + . ID=gene1495;Name=YPC_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07495;old_locus_tag=YPC_1653 NC_017265.1 Protein Homology CDS 1615674 1616498 . + 0 ID=cds1439;Parent=gene1495;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NC_017265.1 RefSeq gene 1616645 1617700 . + . ID=gene1496;Name=YPC_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07500;old_locus_tag=YPC_1654 NC_017265.1 Protein Homology CDS 1616645 1617700 . + 0 ID=cds1440;Parent=gene1496;Dbxref=Genbank:WP_015683592.1;Name=WP_015683592.1;gbkey=CDS;product=glycosidase;protein_id=WP_015683592.1;transl_table=11 NC_017265.1 RefSeq gene 1617727 1618665 . + . ID=gene1497;Name=YPC_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07505;old_locus_tag=YPC_1655 NC_017265.1 Protein Homology CDS 1617727 1618665 . + 0 ID=cds1441;Parent=gene1497;Dbxref=Genbank:WP_002213840.1;Name=WP_002213840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213840.1;transl_table=11 NC_017265.1 RefSeq gene 1618788 1619903 . + . ID=gene1498;Name=YPC_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07510;old_locus_tag=YPC_1656 NC_017265.1 Protein Homology CDS 1618788 1619903 . + 0 ID=cds1442;Parent=gene1498;Dbxref=Genbank:WP_002210194.1;Name=WP_002210194.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210194.1;transl_table=11 NC_017265.1 RefSeq gene 1619942 1621216 . + . ID=gene1499;Name=YPC_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07515;old_locus_tag=YPC_1657 NC_017265.1 Protein Homology CDS 1619942 1621216 . + 0 ID=cds1443;Parent=gene1499;Dbxref=Genbank:WP_002210193.1;Name=WP_002210193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210193.1;transl_table=11 NC_017265.1 RefSeq gene 1621799 1623043 . - . ID=gene1500;Name=YPC_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07520;old_locus_tag=YPC_1658 NC_017265.1 Protein Homology CDS 1621799 1623043 . - 0 ID=cds1444;Parent=gene1500;Dbxref=Genbank:WP_002210192.1;Name=WP_002210192.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_002210192.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1623381 1623589 . + . ID=id155;gbkey=repeat_region NC_017265.1 RefSeq gene 1623948 1624928 . + . ID=gene1501;Name=YPC_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07525;old_locus_tag=YPC_1659 NC_017265.1 Protein Homology CDS 1623948 1624928 . + 0 ID=cds1445;Parent=gene1501;Dbxref=Genbank:WP_002210191.1;Name=WP_002210191.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_002210191.1;transl_table=11 NC_017265.1 RefSeq gene 1624925 1628212 . + . ID=gene1502;Name=YPC_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07530;old_locus_tag=YPC_1660 NC_017265.1 Protein Homology CDS 1624925 1628212 . + 0 ID=cds1446;Parent=gene1502;Dbxref=Genbank:WP_002228501.1;Name=WP_002228501.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_002228501.1;transl_table=11 NC_017265.1 RefSeq gene 1628621 1629967 . + . ID=gene1503;Name=YPC_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07535;old_locus_tag=YPC_1661 NC_017265.1 Protein Homology CDS 1628621 1629967 . + 0 ID=cds1447;Parent=gene1503;Dbxref=Genbank:WP_002222491.1;Name=WP_002222491.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_002222491.1;transl_table=11 NC_017265.1 RefSeq gene 1629964 1630914 . + . ID=gene1504;Name=YPC_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07540;old_locus_tag=YPC_1662 NC_017265.1 Protein Homology CDS 1629964 1630914 . + 0 ID=cds1448;Parent=gene1504;Dbxref=Genbank:WP_002211868.1;Name=WP_002211868.1;gbkey=CDS;product=CRISPR type I-F system protein Csy2;protein_id=WP_002211868.1;transl_table=11 NC_017265.1 RefSeq gene 1630932 1631936 . + . ID=gene1505;Name=YPC_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07545;old_locus_tag=YPC_1663 NC_017265.1 Protein Homology CDS 1630932 1631936 . + 0 ID=cds1449;Parent=gene1505;Dbxref=Genbank:WP_002211867.1;Name=WP_002211867.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_002211867.1;transl_table=11 NC_017265.1 RefSeq gene 1631947 1632501 . + . ID=gene1506;Name=YPC_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07550;old_locus_tag=YPC_1664 NC_017265.1 Protein Homology CDS 1631947 1632501 . + 0 ID=cds1450;Parent=gene1506;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11 NC_017265.1 RefSeq gene 1632579 1633597 . - . ID=gene1507;Name=YPC_RS07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS07555;old_locus_tag=YPC_1665;pseudo=true NC_017265.1 Protein Homology CDS 1632579 1633597 . - 0 ID=cds1451;Parent=gene1507;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alcohol dehydrogenase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1633608 1634111 . - . ID=gene1508;Name=YPC_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07560;old_locus_tag=YPC_1667 NC_017265.1 Protein Homology CDS 1633608 1634111 . - 0 ID=cds1452;Parent=gene1508;Dbxref=Genbank:WP_002211864.1;Name=WP_002211864.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_002211864.1;transl_table=11 NC_017265.1 RefSeq gene 1634158 1635516 . - . ID=gene1509;Name=YPC_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07565;old_locus_tag=YPC_1668 NC_017265.1 Protein Homology CDS 1634158 1635516 . - 0 ID=cds1453;Parent=gene1509;Dbxref=Genbank:WP_002211863.1;Name=WP_002211863.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211863.1;transl_table=11 NC_017265.1 RefSeq gene 1635640 1635849 . + . ID=gene1510;Name=YPC_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07570 NC_017265.1 Protein Homology CDS 1635640 1635849 . + 0 ID=cds1454;Parent=gene1510;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11 NC_017265.1 RefSeq gene 1635964 1636890 . + . ID=gene1511;Name=YPC_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07575;old_locus_tag=YPC_1669 NC_017265.1 Protein Homology CDS 1635964 1636890 . + 0 ID=cds1455;Parent=gene1511;Dbxref=Genbank:WP_002211861.1;Name=WP_002211861.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211861.1;transl_table=11 NC_017265.1 RefSeq gene 1637376 1638113 . + . ID=gene1512;Name=YPC_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07580;old_locus_tag=YPC_1670 NC_017265.1 Protein Homology CDS 1637376 1638113 . + 0 ID=cds1456;Parent=gene1512;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NC_017265.1 RefSeq gene 1638106 1638750 . - . ID=gene1513;Name=YPC_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07585;old_locus_tag=YPC_1671 NC_017265.1 Protein Homology CDS 1638106 1638750 . - 0 ID=cds1457;Parent=gene1513;Dbxref=Genbank:WP_002211858.1;Name=WP_002211858.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11 NC_017265.1 RefSeq gene 1639181 1639858 . + . ID=gene1514;Name=YPC_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07590;old_locus_tag=YPC_1672 NC_017265.1 Protein Homology CDS 1639181 1639858 . + 0 ID=cds1458;Parent=gene1514;Dbxref=Genbank:WP_002211857.1;Name=WP_002211857.1;gbkey=CDS;product=transporter;protein_id=WP_002211857.1;transl_table=11 NC_017265.1 RefSeq gene 1639895 1640056 . + . ID=gene1515;Name=YPC_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07595;old_locus_tag=YPC_1673 NC_017265.1 Protein Homology CDS 1639895 1640056 . + 0 ID=cds1459;Parent=gene1515;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11 NC_017265.1 RefSeq gene 1640386 1640550 . + . ID=gene1516;Name=YPC_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07600 NC_017265.1 Protein Homology CDS 1640386 1640550 . + 0 ID=cds1460;Parent=gene1516;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11 NC_017265.1 RefSeq gene 1640737 1640865 . + . ID=gene1517;Name=YPC_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07605;old_locus_tag=YPC_1676 NC_017265.1 Protein Homology CDS 1640737 1640865 . + 0 ID=cds1461;Parent=gene1517;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11 NC_017265.1 RefSeq gene 1640909 1641976 . + . ID=gene1518;Name=YPC_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07610;old_locus_tag=YPC_1677 NC_017265.1 Protein Homology CDS 1640909 1641976 . + 0 ID=cds1462;Parent=gene1518;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11 NC_017265.1 RefSeq gene 1642125 1643183 . + . ID=gene1519;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=YPC_RS07615;old_locus_tag=YPC_1678 NC_017265.1 Protein Homology CDS 1642125 1643183 . + 0 ID=cds1463;Parent=gene1519;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11 NC_017265.1 RefSeq gene 1643755 1644369 . - . ID=gene1520;Name=YPC_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07620;old_locus_tag=YPC_1680 NC_017265.1 Protein Homology CDS 1643755 1644369 . - 0 ID=cds1464;Parent=gene1520;Dbxref=Genbank:WP_002211851.1;Name=WP_002211851.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211851.1;transl_table=11 NC_017265.1 RefSeq gene 1644636 1645751 . - . ID=gene1521;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YPC_RS07625;old_locus_tag=YPC_1681 NC_017265.1 Protein Homology CDS 1644636 1645751 . - 0 ID=cds1465;Parent=gene1521;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1646039 1647356 . + . ID=id156;gbkey=repeat_region NC_017265.1 RefSeq gene 1646112 1647320 . + . ID=gene1522;Name=YPC_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07630;old_locus_tag=YPC_1682 NC_017265.1 Protein Homology CDS 1646112 1647320 . + 0 ID=cds1466;Parent=gene1522;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 1647283 1647579 . - . ID=gene1523;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=YPC_RS07635;old_locus_tag=YPC_1683 NC_017265.1 Protein Homology CDS 1647283 1647579 . - 0 ID=cds1467;Parent=gene1523;Dbxref=Genbank:WP_002217041.1;Name=WP_002217041.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_002217041.1;transl_table=11 NC_017265.1 RefSeq gene 1647758 1647886 . + . ID=gene1524;Name=YPC_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07640 NC_017265.1 Protein Homology CDS 1647758 1647886 . + 0 ID=cds1468;Parent=gene1524;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11 NC_017265.1 RefSeq gene 1648085 1648330 . - . ID=gene1525;Name=YPC_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07645;old_locus_tag=YPC_1684 NC_017265.1 Protein Homology CDS 1648085 1648330 . - 0 ID=cds1469;Parent=gene1525;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NC_017265.1 RefSeq gene 1648643 1649689 . - . ID=gene1526;Name=YPC_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07650;old_locus_tag=YPC_1685 NC_017265.1 Protein Homology CDS 1648643 1649689 . - 0 ID=cds1470;Parent=gene1526;Dbxref=Genbank:WP_015683595.1;Name=WP_015683595.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_015683595.1;transl_table=11 NC_017265.1 RefSeq gene 1649924 1650211 . + . ID=gene1527;Name=YPC_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07655;old_locus_tag=YPC_1686 NC_017265.1 Protein Homology CDS 1649924 1650211 . + 0 ID=cds1471;Parent=gene1527;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1650446 1651774 . + . ID=id157;gbkey=repeat_region NC_017265.1 RefSeq gene 1650488 1651696 . - . ID=gene1528;Name=YPC_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07660;old_locus_tag=YPC_1687 NC_017265.1 Protein Homology CDS 1650488 1651696 . - 0 ID=cds1472;Parent=gene1528;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 1651792 1655433 . - . ID=gene1529;Name=YPC_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07665;old_locus_tag=YPC_1688 NC_017265.1 Protein Homology CDS 1651792 1655433 . - 0 ID=cds1473;Parent=gene1529;Dbxref=Genbank:WP_042468403.1;Name=WP_042468403.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_042468403.1;transl_table=11 NC_017265.1 RefSeq gene 1656017 1656979 . + . ID=gene1530;Name=YPC_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07670;old_locus_tag=YPC_1689 NC_017265.1 Protein Homology CDS 1656017 1656979 . + 0 ID=cds1474;Parent=gene1530;Dbxref=Genbank:WP_002210927.1;Name=WP_002210927.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=WP_002210927.1;transl_table=11 NC_017265.1 RefSeq gene 1657102 1657698 . - . ID=gene1531;Name=YPC_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07675;old_locus_tag=YPC_1690 NC_017265.1 Protein Homology CDS 1657102 1657698 . - 0 ID=cds1475;Parent=gene1531;Dbxref=Genbank:WP_002210928.1;Name=WP_002210928.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210928.1;transl_table=11 NC_017265.1 RefSeq gene 1657840 1658364 . + . ID=gene1532;Name=YPC_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07680;old_locus_tag=YPC_1691 NC_017265.1 Protein Homology CDS 1657840 1658364 . + 0 ID=cds1476;Parent=gene1532;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11 NC_017265.1 RefSeq gene 1658377 1658544 . + . ID=gene1533;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YPC_RS07685;old_locus_tag=YPC_1692 NC_017265.1 Protein Homology CDS 1658377 1658544 . + 0 ID=cds1477;Parent=gene1533;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NC_017265.1 RefSeq gene 1658608 1659612 . + . ID=gene1534;Name=YPC_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07690;old_locus_tag=YPC_1693 NC_017265.1 Protein Homology CDS 1658608 1659612 . + 0 ID=cds1478;Parent=gene1534;Dbxref=Genbank:WP_032465670.1;Name=WP_032465670.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_032465670.1;transl_table=11 NC_017265.1 RefSeq gene 1659619 1660569 . + . ID=gene1535;Name=YPC_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07695;old_locus_tag=YPC_1694 NC_017265.1 Protein Homology CDS 1659619 1660569 . + 0 ID=cds1479;Parent=gene1535;Dbxref=Genbank:WP_002210933.1;Name=WP_002210933.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NC_017265.1 RefSeq gene 1660607 1661536 . + . ID=gene1536;Name=YPC_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07700;old_locus_tag=YPC_1695 NC_017265.1 Protein Homology CDS 1660607 1661536 . + 0 ID=cds1480;Parent=gene1536;Dbxref=Genbank:WP_002210934.1;Name=WP_002210934.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_002210934.1;transl_table=11 NC_017265.1 RefSeq gene 1661550 1662284 . + . ID=gene1537;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YPC_RS07705;old_locus_tag=YPC_1696 NC_017265.1 Protein Homology CDS 1661550 1662284 . + 0 ID=cds1481;Parent=gene1537;Dbxref=Genbank:WP_002210935.1;Name=WP_002210935.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_002210935.1;transl_table=11 NC_017265.1 RefSeq gene 1662438 1662674 . + . ID=gene1538;Name=YPC_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07710;old_locus_tag=YPC_1697 NC_017265.1 Protein Homology CDS 1662438 1662674 . + 0 ID=cds1482;Parent=gene1538;Dbxref=Genbank:WP_002220787.1;Name=WP_002220787.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NC_017265.1 RefSeq gene 1662805 1664010 . + . ID=gene1539;Name=YPC_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07715;old_locus_tag=YPC_1698 NC_017265.1 Protein Homology CDS 1662805 1664010 . + 0 ID=cds1483;Parent=gene1539;Dbxref=Genbank:WP_002354075.1;Name=WP_002354075.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002354075.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1664060 1664780 . + . ID=id158;gbkey=repeat_region NC_017265.1 RefSeq gene 1664210 1664668 . + . ID=gene1540;Name=YPC_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07720;old_locus_tag=YPC_1700 NC_017265.1 Protein Homology CDS 1664210 1664668 . + 0 ID=cds1484;Parent=gene1540;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 1665084 1665890 . + . ID=gene1541;Name=YPC_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07725;old_locus_tag=YPC_1701 NC_017265.1 Protein Homology CDS 1665084 1665890 . + 0 ID=cds1485;Parent=gene1541;Dbxref=Genbank:WP_002213080.1;Name=WP_002213080.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_002213080.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1665923 1666096 . + . ID=id159;gbkey=repeat_region NC_017265.1 RefSeq gene 1666179 1667204 . + . ID=gene1542;Name=YPC_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07730;old_locus_tag=YPC_1703 NC_017265.1 Protein Homology CDS 1666179 1667204 . + 0 ID=cds1486;Parent=gene1542;Dbxref=Genbank:WP_002217396.1;Name=WP_002217396.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_002217396.1;transl_table=11 NC_017265.1 RefSeq gene 1667194 1667832 . + . ID=gene1543;Name=YPC_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07735;old_locus_tag=YPC_1704 NC_017265.1 Protein Homology CDS 1667194 1667832 . + 0 ID=cds1487;Parent=gene1543;Dbxref=Genbank:WP_002213082.1;Name=WP_002213082.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_002213082.1;transl_table=11 NC_017265.1 RefSeq gene 1667832 1668854 . + . ID=gene1544;Name=YPC_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07740;old_locus_tag=YPC_1705 NC_017265.1 Protein Homology CDS 1667832 1668854 . + 0 ID=cds1488;Parent=gene1544;Dbxref=Genbank:WP_002213083.1;Name=WP_002213083.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11 NC_017265.1 RefSeq gene 1668869 1669678 . + . ID=gene1545;Name=YPC_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07745;old_locus_tag=YPC_1706 NC_017265.1 Protein Homology CDS 1668869 1669678 . + 0 ID=cds1489;Parent=gene1545;Dbxref=Genbank:WP_002213084.1;Name=WP_002213084.1;gbkey=CDS;product=DNAse;protein_id=WP_002213084.1;transl_table=11 NC_017265.1 RefSeq gene 1669984 1671417 . + . ID=gene1546;Name=YPC_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07750;old_locus_tag=YPC_1707 NC_017265.1 Protein Homology CDS 1669984 1671417 . + 0 ID=cds1490;Parent=gene1546;Dbxref=Genbank:WP_002213085.1;Name=WP_002213085.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIBC;protein_id=WP_002213085.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1671455 1672179 . + . ID=id160;gbkey=repeat_region NC_017265.1 RefSeq gene 1671607 1672065 . + . ID=gene1547;Name=YPC_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07755;old_locus_tag=YPC_1709 NC_017265.1 Protein Homology CDS 1671607 1672065 . + 0 ID=cds1491;Parent=gene1547;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 1672508 1673326 . + . ID=gene1548;Name=YPC_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07760;old_locus_tag=YPC_1710 NC_017265.1 Protein Homology CDS 1672508 1673326 . + 0 ID=cds1492;Parent=gene1548;Dbxref=Genbank:WP_002215853.1;Name=WP_002215853.1;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NC_017265.1 RefSeq gene 1673500 1673853 . + . ID=gene1549;Name=YPC_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07765;old_locus_tag=YPC_1711 NC_017265.1 Protein Homology CDS 1673500 1673853 . + 0 ID=cds1493;Parent=gene1549;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NC_017265.1 RefSeq gene 1673888 1674277 . + . ID=gene1550;Name=YPC_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07770;old_locus_tag=YPC_1712 NC_017265.1 Protein Homology CDS 1673888 1674277 . + 0 ID=cds1494;Parent=gene1550;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11 NC_017265.1 RefSeq gene 1674318 1674893 . + . ID=gene1551;Name=YPC_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07775;old_locus_tag=YPC_1713 NC_017265.1 Protein Homology CDS 1674318 1674893 . + 0 ID=cds1495;Parent=gene1551;Dbxref=Genbank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11 NC_017265.1 RefSeq gene 1674874 1675740 . + . ID=gene1552;Name=YPC_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07780;old_locus_tag=YPC_1714 NC_017265.1 Protein Homology CDS 1674874 1675740 . + 0 ID=cds1496;Parent=gene1552;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NC_017265.1 RefSeq gene 1675823 1676842 . + . ID=gene1553;Name=YPC_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07785;old_locus_tag=YPC_1715 NC_017265.1 Protein Homology CDS 1675823 1676842 . + 0 ID=cds1497;Parent=gene1553;Dbxref=Genbank:WP_002215854.1;Name=WP_002215854.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_002215854.1;transl_table=11 NC_017265.1 RefSeq gene 1676970 1677512 . + . ID=gene1554;Name=YPC_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07790;old_locus_tag=YPC_1716 NC_017265.1 Protein Homology CDS 1676970 1677512 . + 0 ID=cds1498;Parent=gene1554;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11 NC_017265.1 RefSeq gene 1677887 1679191 . + . ID=gene1555;Name=YPC_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07795;old_locus_tag=YPC_1717 NC_017265.1 Protein Homology CDS 1677887 1679191 . + 0 ID=cds1499;Parent=gene1555;Dbxref=Genbank:WP_015683597.1;Name=WP_015683597.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_015683597.1;transl_table=11 NC_017265.1 RefSeq gene 1679933 1680298 . + . ID=gene1556;Name=YPC_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07800 NC_017265.1 Protein Homology CDS 1679933 1680298 . + 0 ID=cds1500;Parent=gene1556;Dbxref=Genbank:WP_002213099.1;Name=WP_002213099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213099.1;transl_table=11 NC_017265.1 RefSeq gene 1680306 1680719 . + . ID=gene1557;Name=YPC_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07805;old_locus_tag=YPC_1721 NC_017265.1 Protein Homology CDS 1680306 1680719 . + 0 ID=cds1501;Parent=gene1557;Dbxref=Genbank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1680742 1682059 . + . ID=id161;gbkey=repeat_region NC_017265.1 RefSeq gene 1680815 1682023 . + . ID=gene1558;Name=YPC_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07810;old_locus_tag=YPC_1722 NC_017265.1 Protein Homology CDS 1680815 1682023 . + 0 ID=cds1502;Parent=gene1558;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 1682353 1682892 . + . ID=gene1559;Name=YPC_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07815;old_locus_tag=YPC_1723 NC_017265.1 Protein Homology CDS 1682353 1682892 . + 0 ID=cds1503;Parent=gene1559;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11 NC_017265.1 RefSeq gene 1683131 1686577 . - . ID=gene1560;Name=YPC_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07820;old_locus_tag=YPC_1724 NC_017265.1 Protein Homology CDS 1683131 1686577 . - 0 ID=cds1504;Parent=gene1560;Dbxref=Genbank:WP_002210924.1;Name=WP_002210924.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_002210924.1;transl_table=11 NC_017265.1 RefSeq gene 1686847 1688049 . + . ID=gene1561;Name=YPC_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07825;old_locus_tag=YPC_1726 NC_017265.1 Protein Homology CDS 1686847 1688049 . + 0 ID=cds1505;Parent=gene1561;Dbxref=Genbank:WP_002222341.1;Name=WP_002222341.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002222341.1;transl_table=11 NC_017265.1 RefSeq gene 1688042 1688746 . + . ID=gene1562;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YPC_RS07830;old_locus_tag=YPC_1727 NC_017265.1 Protein Homology CDS 1688042 1688746 . + 0 ID=cds1506;Parent=gene1562;Dbxref=Genbank:WP_002210923.1;Name=WP_002210923.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NC_017265.1 RefSeq gene 1688746 1689993 . + . ID=gene1563;Name=YPC_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07835;old_locus_tag=YPC_1728 NC_017265.1 Protein Homology CDS 1688746 1689993 . + 0 ID=cds1507;Parent=gene1563;Dbxref=Genbank:WP_002210922.1;Name=WP_002210922.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002210922.1;transl_table=11 NC_017265.1 RefSeq gene 1690012 1690782 . + . ID=gene1564;Name=YPC_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07840;old_locus_tag=YPC_1729 NC_017265.1 Protein Homology CDS 1690012 1690782 . + 0 ID=cds1508;Parent=gene1564;Dbxref=Genbank:WP_002216175.1;Name=WP_002216175.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_002216175.1;transl_table=11 NC_017265.1 RefSeq gene 1690976 1691812 . + . ID=gene1565;Name=YPC_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07845;old_locus_tag=YPC_1732 NC_017265.1 Protein Homology CDS 1690976 1691812 . + 0 ID=cds1509;Parent=gene1565;Dbxref=Genbank:WP_002210921.1;Name=WP_002210921.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11 NC_017265.1 RefSeq gene 1692142 1693377 . + . ID=gene1566;Name=YPC_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07850;old_locus_tag=YPC_1733 NC_017265.1 Protein Homology CDS 1692142 1693377 . + 0 ID=cds1510;Parent=gene1566;Dbxref=Genbank:WP_002210920.1;Name=WP_002210920.1;gbkey=CDS;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NC_017265.1 RefSeq gene 1693610 1694731 . - . ID=gene1567;Name=YPC_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07855;old_locus_tag=YPC_1734 NC_017265.1 Protein Homology CDS 1693610 1694731 . - 0 ID=cds1511;Parent=gene1567;Dbxref=Genbank:WP_002210919.1;Name=WP_002210919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210919.1;transl_table=11 NC_017265.1 RefSeq gene 1694815 1696269 . - . ID=gene1568;Name=YPC_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07860;old_locus_tag=YPC_1735 NC_017265.1 Protein Homology CDS 1694815 1696269 . - 0 ID=cds1512;Parent=gene1568;Dbxref=Genbank:WP_002210918.1;Name=WP_002210918.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_002210918.1;transl_table=11 NC_017265.1 RefSeq gene 1696275 1696946 . - . ID=gene1569;Name=YPC_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07865;old_locus_tag=YPC_1736 NC_017265.1 Protein Homology CDS 1696275 1696946 . - 0 ID=cds1513;Parent=gene1569;Dbxref=Genbank:WP_002210917.1;Name=WP_002210917.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210917.1;transl_table=11 NC_017265.1 RefSeq gene 1697157 1697780 . - . ID=gene1570;Name=YPC_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07870;old_locus_tag=YPC_1737 NC_017265.1 Protein Homology CDS 1697157 1697780 . - 0 ID=cds1514;Parent=gene1570;Dbxref=Genbank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210916.1;transl_table=11 NC_017265.1 RefSeq gene 1697968 1699338 . - . ID=gene1571;Name=YPC_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07875;old_locus_tag=YPC_1738 NC_017265.1 Protein Homology CDS 1697968 1699338 . - 0 ID=cds1515;Parent=gene1571;Dbxref=Genbank:WP_002210915.1;Name=WP_002210915.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002210915.1;transl_table=11 NC_017265.1 RefSeq gene 1699399 1700025 . - . ID=gene1572;Name=YPC_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07880;old_locus_tag=YPC_1739 NC_017265.1 Protein Homology CDS 1699399 1700025 . - 0 ID=cds1516;Parent=gene1572;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11 NC_017265.1 RefSeq gene 1700083 1701198 . - . ID=gene1573;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=YPC_RS07885;old_locus_tag=YPC_1740 NC_017265.1 Protein Homology CDS 1700083 1701198 . - 0 ID=cds1517;Parent=gene1573;Dbxref=Genbank:WP_002210913.1;Name=WP_002210913.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_002210913.1;transl_table=11 NC_017265.1 RefSeq gene 1701385 1701831 . - . ID=gene1574;Name=YPC_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07890;old_locus_tag=YPC_1741 NC_017265.1 Protein Homology CDS 1701385 1701831 . - 0 ID=cds1518;Parent=gene1574;Dbxref=Genbank:WP_002210912.1;Name=WP_002210912.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210912.1;transl_table=11 NC_017265.1 RefSeq gene 1701824 1702450 . - . ID=gene1575;Name=YPC_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07895;old_locus_tag=YPC_1742 NC_017265.1 Protein Homology CDS 1701824 1702450 . - 0 ID=cds1519;Parent=gene1575;Dbxref=Genbank:WP_002218214.1;Name=WP_002218214.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_002218214.1;transl_table=11 NC_017265.1 RefSeq gene 1702581 1703834 . + . ID=gene1576;Name=YPC_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07900;old_locus_tag=YPC_1743 NC_017265.1 Protein Homology CDS 1702581 1703834 . + 0 ID=cds1520;Parent=gene1576;Dbxref=Genbank:WP_002210910.1;Name=WP_002210910.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NC_017265.1 RefSeq gene 1703980 1705023 . - . ID=gene1577;Name=YPC_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07905;old_locus_tag=YPC_1744 NC_017265.1 Protein Homology CDS 1703980 1705023 . - 0 ID=cds1521;Parent=gene1577;Dbxref=Genbank:WP_002210909.1;Name=WP_002210909.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_002210909.1;transl_table=11 NC_017265.1 RefSeq gene 1705299 1705559 . - . ID=gene1578;Name=YPC_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07910;old_locus_tag=YPC_1745 NC_017265.1 Protein Homology CDS 1705299 1705559 . - 0 ID=cds1522;Parent=gene1578;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NC_017265.1 RefSeq gene 1705679 1707259 . - . ID=gene1579;Name=YPC_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07915;old_locus_tag=YPC_1746 NC_017265.1 Protein Homology CDS 1705679 1707259 . - 0 ID=cds1523;Parent=gene1579;Dbxref=Genbank:WP_002210907.1;Name=WP_002210907.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210907.1;transl_table=11 NC_017265.1 RefSeq gene 1708179 1709036 . - . ID=gene1580;Name=YPC_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07920;old_locus_tag=YPC_1747 NC_017265.1 Protein Homology CDS 1708179 1709036 . - 0 ID=cds1524;Parent=gene1580;Dbxref=Genbank:WP_002210906.1;Name=WP_002210906.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210906.1;transl_table=11 NC_017265.1 RefSeq gene 1709196 1709579 . + . ID=gene1581;Name=YPC_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07925;old_locus_tag=YPC_1748 NC_017265.1 Protein Homology CDS 1709196 1709579 . + 0 ID=cds1525;Parent=gene1581;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NC_017265.1 RefSeq gene 1709637 1709810 . + . ID=gene1582;Name=YPC_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07930;old_locus_tag=YPC_1750 NC_017265.1 Protein Homology CDS 1709637 1709810 . + 0 ID=cds1526;Parent=gene1582;Dbxref=Genbank:WP_002210904.1;Name=WP_002210904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210904.1;transl_table=11 NC_017265.1 RefSeq gene 1710111 1711435 . + . ID=gene1583;Name=YPC_RS07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS07935;pseudo=true NC_017265.1 Protein Homology CDS 1710111 1711435 . + 0 ID=cds1527;Parent=gene1583;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoanhydride phosphorylase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1711737 1711940 . - . ID=gene1584;Name=YPC_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07940;old_locus_tag=YPC_1755 NC_017265.1 Protein Homology CDS 1711737 1711940 . - 0 ID=cds1528;Parent=gene1584;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11 NC_017265.1 RefSeq gene 1712243 1713142 . - . ID=gene1585;Name=YPC_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07945;old_locus_tag=YPC_1756 NC_017265.1 Protein Homology CDS 1712243 1713142 . - 0 ID=cds1529;Parent=gene1585;Dbxref=Genbank:WP_002210901.1;Name=WP_002210901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210901.1;transl_table=11 NC_017265.1 RefSeq gene 1713234 1713683 . - . ID=gene1586;Name=YPC_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07950;old_locus_tag=YPC_1757 NC_017265.1 Protein Homology CDS 1713234 1713683 . - 0 ID=cds1530;Parent=gene1586;Dbxref=Genbank:WP_002210900.1;Name=WP_002210900.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NC_017265.1 RefSeq gene 1714219 1714752 . - . ID=gene1587;Name=YPC_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07955;old_locus_tag=YPC_1759 NC_017265.1 Protein Homology CDS 1714219 1714752 . - 0 ID=cds1531;Parent=gene1587;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11 NC_017265.1 RefSeq gene 1715035 1716045 . - . ID=gene1588;Name=YPC_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07960;old_locus_tag=YPC_1760 NC_017265.1 Protein Homology CDS 1715035 1716045 . - 0 ID=cds1532;Parent=gene1588;Dbxref=Genbank:WP_002210897.1;Name=WP_002210897.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_002210897.1;transl_table=11 NC_017265.1 RefSeq gene 1716452 1719652 . - . ID=gene1589;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YPC_RS07965;old_locus_tag=YPC_1761 NC_017265.1 Protein Homology CDS 1716452 1719652 . - 0 ID=cds1533;Parent=gene1589;Dbxref=Genbank:WP_015683601.1;Name=WP_015683601.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-D-galactosidase;protein_id=WP_015683601.1;transl_table=11 NC_017265.1 cmsearch region 1720012 1720454 . + . ID=id162;Note=cspA;gbkey=misc_feature NC_017265.1 RefSeq gene 1720193 1720405 . + . ID=gene1590;Name=YPC_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07970;old_locus_tag=YPC_1762 NC_017265.1 Protein Homology CDS 1720193 1720405 . + 0 ID=cds1534;Parent=gene1590;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11 NC_017265.1 RefSeq gene 1720620 1720811 . + . ID=gene1591;Name=YPC_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07975;old_locus_tag=YPC_1763 NC_017265.1 Protein Homology CDS 1720620 1720811 . + 0 ID=cds1535;Parent=gene1591;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NC_017265.1 RefSeq gene 1720994 1722695 . - . ID=gene1592;Name=YPC_RS07980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS07980;pseudo=true NC_017265.1 Protein Homology CDS 1720994 1722695 . - 0 ID=cds1536;Parent=gene1592;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chemotaxis protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1723332 1723502 . + . ID=gene1593;Name=YPC_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07985 NC_017265.1 Protein Homology CDS 1723332 1723502 . + 0 ID=cds1537;Parent=gene1593;Dbxref=Genbank:WP_002214053.1;Name=WP_002214053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214053.1;transl_table=11 NC_017265.1 RefSeq gene 1723854 1724552 . + . ID=gene1594;Name=YPC_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS07990;old_locus_tag=YPC_1766 NC_017265.1 Protein Homology CDS 1723854 1724552 . + 0 ID=cds1538;Parent=gene1594;Dbxref=Genbank:WP_002210891.1;Name=WP_002210891.1;gbkey=CDS;product=magnesium transporter;protein_id=WP_002210891.1;transl_table=11 NC_017265.1 RefSeq gene 1724953 1727651 . + . ID=gene1595;Name=YPC_RS07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS07995;pseudo=true NC_017265.1 Protein Homology CDS 1724953 1727651 . + 0 ID=cds1539;Parent=gene1595;Note=P-type%3B involved in magnesium transport into the cytoplasm;exception=annotated by transcript or proteomic data;gbkey=CDS;product=magnesium ABC transporter ATPase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1728839 1729190 . + . ID=gene1596;Name=YPC_RS08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08000;pseudo=true NC_017265.1 Protein Homology CDS 1728839 1729190 . + 0 ID=cds1540;Parent=gene1596;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1729194 1729774 . + . ID=gene1597;Name=YPC_RS08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08005;old_locus_tag=YPC_1771;pseudo=true NC_017265.1 Protein Homology CDS 1729194 1729774 . + 0 ID=cds1541;Parent=gene1597;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1729979 1730866 . + . ID=gene1598;Name=YPC_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08010;old_locus_tag=YPC_1772 NC_017265.1 Protein Homology CDS 1729979 1730866 . + 0 ID=cds1542;Parent=gene1598;Dbxref=Genbank:WP_002210888.1;Name=WP_002210888.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_002210888.1;transl_table=11 NC_017265.1 RefSeq gene 1730863 1731810 . + . ID=gene1599;Name=YPC_RS08015;end_range=1731810,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08015;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 1730863 1731810 . + 0 ID=cds1543;Parent=gene1599;end_range=1731810,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1732181 1734346 . + . ID=gene1600;Name=YPC_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08020;old_locus_tag=YPC_1774 NC_017265.1 Protein Homology CDS 1732181 1734346 . + 0 ID=cds1544;Parent=gene1600;Dbxref=Genbank:WP_002210886.1;Name=WP_002210886.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_002210886.1;transl_table=11 NC_017265.1 RefSeq gene 1734509 1735006 . + . ID=gene1601;Name=YPC_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08025;old_locus_tag=YPC_1775 NC_017265.1 Protein Homology CDS 1734509 1735006 . + 0 ID=cds1545;Parent=gene1601;Dbxref=Genbank:WP_002210885.1;Name=WP_002210885.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_002210885.1;transl_table=11 NC_017265.1 RefSeq gene 1735298 1736533 . - . ID=gene1602;Name=YPC_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08030;old_locus_tag=YPC_1776 NC_017265.1 Protein Homology CDS 1735298 1736533 . - 0 ID=cds1546;Parent=gene1602;Dbxref=Genbank:WP_002210884.1;Name=WP_002210884.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210884.1;transl_table=11 NC_017265.1 RefSeq gene 1736546 1736923 . - . ID=gene1603;Name=YPC_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08035;old_locus_tag=YPC_1777 NC_017265.1 Protein Homology CDS 1736546 1736923 . - 0 ID=cds1547;Parent=gene1603;Dbxref=Genbank:WP_002210883.1;Name=WP_002210883.1;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_002210883.1;transl_table=11 NC_017265.1 RefSeq gene 1736920 1737906 . - . ID=gene1604;Name=YPC_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08040;old_locus_tag=YPC_1778 NC_017265.1 Protein Homology CDS 1736920 1737906 . - 0 ID=cds1548;Parent=gene1604;Dbxref=Genbank:WP_002210882.1;Name=WP_002210882.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210882.1;transl_table=11 NC_017265.1 RefSeq gene 1738096 1738761 . + . ID=gene1605;Name=YPC_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08045;old_locus_tag=YPC_1779 NC_017265.1 Protein Homology CDS 1738096 1738761 . + 0 ID=cds1549;Parent=gene1605;Dbxref=Genbank:WP_002210881.1;Name=WP_002210881.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210881.1;transl_table=11 NC_017265.1 RefSeq gene 1739236 1743042 . + . ID=gene1606;Name=YPC_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08050;old_locus_tag=YPC_1780 NC_017265.1 Protein Homology CDS 1739236 1743042 . + 0 ID=cds1550;Parent=gene1606;Dbxref=Genbank:WP_002224033.1;Name=WP_002224033.1;gbkey=CDS;product=autotransporter;protein_id=WP_002224033.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1740912 1743042 . + . ID=id163;gbkey=repeat_region NC_017265.1 RefSeq gene 1743570 1746446 . + . ID=gene1607;Name=YPC_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08055;old_locus_tag=YPC_1781 NC_017265.1 Protein Homology CDS 1743570 1746446 . + 0 ID=cds1551;Parent=gene1607;Dbxref=Genbank:WP_002210878.1;Name=WP_002210878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210878.1;transl_table=11 NC_017265.1 RefSeq gene 1746515 1747216 . + . ID=gene1608;Name=YPC_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08060;old_locus_tag=YPC_1782 NC_017265.1 Protein Homology CDS 1746515 1747216 . + 0 ID=cds1552;Parent=gene1608;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11 NC_017265.1 RefSeq gene 1747457 1749130 . + . ID=gene1609;Name=YPC_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08065;old_locus_tag=YPC_1783 NC_017265.1 Protein Homology CDS 1747457 1749130 . + 0 ID=cds1553;Parent=gene1609;Dbxref=Genbank:WP_002210876.1;Name=WP_002210876.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210876.1;transl_table=11 NC_017265.1 RefSeq gene 1749314 1750924 . + . ID=gene1610;Name=YPC_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08070;old_locus_tag=YPC_1784 NC_017265.1 Protein Homology CDS 1749314 1750924 . + 0 ID=cds1554;Parent=gene1610;Dbxref=Genbank:WP_015683605.1;Name=WP_015683605.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_015683605.1;transl_table=11 NC_017265.1 RefSeq gene 1751097 1751969 . + . ID=gene1611;Name=YPC_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08075;old_locus_tag=YPC_1785 NC_017265.1 Protein Homology CDS 1751097 1751969 . + 0 ID=cds1555;Parent=gene1611;Dbxref=Genbank:WP_002214065.1;Name=WP_002214065.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_002214065.1;transl_table=11 NC_017265.1 RefSeq gene 1751969 1753018 . + . ID=gene1612;Name=YPC_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08080;old_locus_tag=YPC_1786 NC_017265.1 Protein Homology CDS 1751969 1753018 . + 0 ID=cds1556;Parent=gene1612;Dbxref=Genbank:WP_002210874.1;Name=WP_002210874.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_002210874.1;transl_table=11 NC_017265.1 RefSeq gene 1753119 1753508 . + . ID=gene1613;Name=YPC_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08085;old_locus_tag=YPC_1787 NC_017265.1 Protein Homology CDS 1753119 1753508 . + 0 ID=cds1557;Parent=gene1613;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11 NC_017265.1 RefSeq gene 1753518 1754162 . + . ID=gene1614;Name=YPC_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08090;old_locus_tag=YPC_1788 NC_017265.1 Protein Homology CDS 1753518 1754162 . + 0 ID=cds1558;Parent=gene1614;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NC_017265.1 RefSeq gene 1754482 1754601 . - . ID=gene1615;Name=YPC_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08095;old_locus_tag=YPC_1790 NC_017265.1 Protein Homology CDS 1754482 1754601 . - 0 ID=cds1559;Parent=gene1615;Dbxref=Genbank:WP_002210871.1;Name=WP_002210871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210871.1;transl_table=11 NC_017265.1 RefSeq gene 1754733 1755497 . + . ID=gene1616;Name=YPC_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08100;old_locus_tag=YPC_1791 NC_017265.1 Protein Homology CDS 1754733 1755497 . + 0 ID=cds1560;Parent=gene1616;Dbxref=Genbank:WP_002210870.1;Name=WP_002210870.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210870.1;transl_table=11 NC_017265.1 RefSeq gene 1755971 1758064 . + . ID=gene1617;Name=YPC_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08105;old_locus_tag=YPC_1792 NC_017265.1 Protein Homology CDS 1755971 1758064 . + 0 ID=cds1561;Parent=gene1617;Dbxref=Genbank:WP_042468801.1;Name=WP_042468801.1;gbkey=CDS;product=cell surface protein;protein_id=WP_042468801.1;transl_table=11 NC_017265.1 RefSeq gene 1758051 1758485 . + . ID=gene1618;Name=YPC_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08110;old_locus_tag=YPC_1793 NC_017265.1 Protein Homology CDS 1758051 1758485 . + 0 ID=cds1562;Parent=gene1618;Dbxref=Genbank:WP_002215939.1;Name=WP_002215939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215939.1;transl_table=11 NC_017265.1 RefSeq gene 1758585 1759538 . + . ID=gene1619;Name=YPC_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08115;old_locus_tag=YPC_1794 NC_017265.1 Protein Homology CDS 1758585 1759538 . + 0 ID=cds1563;Parent=gene1619;Dbxref=Genbank:WP_002210869.1;Name=WP_002210869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210869.1;transl_table=11 NC_017265.1 RefSeq gene 1760157 1761386 . - . ID=gene1620;Name=YPC_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08125;old_locus_tag=YPC_1795 NC_017265.1 Protein Homology CDS 1760157 1761386 . - 0 ID=cds1564;Parent=gene1620;Dbxref=Genbank:WP_002210868.1;Name=WP_002210868.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_002210868.1;transl_table=11 NC_017265.1 RefSeq gene 1761788 1761982 . - . ID=gene1621;Name=YPC_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08130 NC_017265.1 Protein Homology CDS 1761788 1761982 . - 0 ID=cds1565;Parent=gene1621;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NC_017265.1 RefSeq gene 1762547 1762795 . + . ID=gene1622;Name=YPC_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08135;old_locus_tag=YPC_1796 NC_017265.1 Protein Homology CDS 1762547 1762795 . + 0 ID=cds1566;Parent=gene1622;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NC_017265.1 RefSeq gene 1763188 1764444 . + . ID=gene1623;Name=YPC_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08140;old_locus_tag=YPC_1797 NC_017265.1 Protein Homology CDS 1763188 1764444 . + 0 ID=cds1567;Parent=gene1623;Dbxref=Genbank:WP_002210864.1;Name=WP_002210864.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210864.1;transl_table=11 NC_017265.1 RefSeq gene 1764599 1764832 . + . ID=gene1624;Name=YPC_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08145;old_locus_tag=YPC_1799 NC_017265.1 Protein Homology CDS 1764599 1764832 . + 0 ID=cds1568;Parent=gene1624;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1765331 1767288 . + . ID=id164;gbkey=repeat_region NC_017265.1 RefSeq gene 1765399 1766178 . - . ID=gene1625;Name=YPC_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08150;old_locus_tag=YPC_1800 NC_017265.1 Protein Homology CDS 1765399 1766178 . - 0 ID=cds1569;Parent=gene1625;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 1766178 1767200 . - . ID=gene1626;Name=YPC_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08155;old_locus_tag=YPC_1801 NC_017265.1 Protein Homology CDS 1766178 1767200 . - 0 ID=cds1570;Parent=gene1626;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 1767740 1770415 . - . ID=gene1627;Name=YPC_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08160;old_locus_tag=YPC_1802 NC_017265.1 Protein Homology CDS 1767740 1770415 . - 0 ID=cds1571;Parent=gene1627;Dbxref=Genbank:WP_002223614.1;Name=WP_002223614.1;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_002223614.1;transl_table=11 NC_017265.1 RefSeq gene 1771222 1771866 . + . ID=gene1628;Name=YPC_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08165;old_locus_tag=YPC_1803 NC_017265.1 Protein Homology CDS 1771222 1771866 . + 0 ID=cds1572;Parent=gene1628;Dbxref=Genbank:WP_002210656.1;Name=WP_002210656.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210656.1;transl_table=11 NC_017265.1 RefSeq gene 1772704 1774341 . + . ID=gene1629;Name=YPC_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08170;old_locus_tag=YPC_1804 NC_017265.1 Protein Homology CDS 1772704 1774341 . + 0 ID=cds1573;Parent=gene1629;Dbxref=Genbank:WP_015683607.1;Name=WP_015683607.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_015683607.1;transl_table=11 NC_017265.1 RefSeq gene 1774428 1775348 . + . ID=gene1630;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YPC_RS08175;old_locus_tag=YPC_1805 NC_017265.1 Protein Homology CDS 1774428 1775348 . + 0 ID=cds1574;Parent=gene1630;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11 NC_017265.1 RefSeq gene 1775364 1776272 . + . ID=gene1631;Name=YPC_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08180;old_locus_tag=YPC_1806 NC_017265.1 Protein Homology CDS 1775364 1776272 . + 0 ID=cds1575;Parent=gene1631;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11 NC_017265.1 RefSeq gene 1776284 1777285 . + . ID=gene1632;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YPC_RS08185;old_locus_tag=YPC_1807 NC_017265.1 Protein Homology CDS 1776284 1777285 . + 0 ID=cds1576;Parent=gene1632;Dbxref=Genbank:WP_002210652.1;Name=WP_002210652.1;gbkey=CDS;gene=oppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210652.1;transl_table=11 NC_017265.1 RefSeq gene 1777282 1778283 . + . ID=gene1633;Name=YPC_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08190;old_locus_tag=YPC_1808 NC_017265.1 Protein Homology CDS 1777282 1778283 . + 0 ID=cds1577;Parent=gene1633;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11 NC_017265.1 RefSeq gene 1778332 1778547 . - . ID=gene1634;Name=YPC_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08195 NC_017265.1 GeneMarkS+ CDS 1778332 1778547 . - 0 ID=cds1578;Parent=gene1634;Dbxref=Genbank:WP_015683825.1;Name=WP_015683825.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683825.1;transl_table=11 NC_017265.1 RefSeq gene 1778844 1779059 . + . ID=gene1635;Name=YPC_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08200;old_locus_tag=YPC_1809 NC_017265.1 Protein Homology CDS 1778844 1779059 . + 0 ID=cds1579;Parent=gene1635;Dbxref=Genbank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NC_017265.1 RefSeq gene 1779359 1779682 . - . ID=gene1636;Name=YPC_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08205;old_locus_tag=YPC_1810 NC_017265.1 Protein Homology CDS 1779359 1779682 . - 0 ID=cds1580;Parent=gene1636;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NC_017265.1 RefSeq gene 1779847 1781307 . - . ID=gene1637;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YPC_RS08210;old_locus_tag=YPC_1811 NC_017265.1 Protein Homology CDS 1779847 1781307 . - 0 ID=cds1581;Parent=gene1637;Dbxref=Genbank:WP_002210648.1;Name=WP_002210648.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_002210648.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1781442 1781616 . + . ID=id165;gbkey=repeat_region NC_017265.1 RefSeq gene 1782354 1782893 . + . ID=gene1638;Name=YPC_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08215;old_locus_tag=YPC_1814 NC_017265.1 Protein Homology CDS 1782354 1782893 . + 0 ID=cds1582;Parent=gene1638;Dbxref=Genbank:WP_002210646.1;Name=WP_002210646.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002210646.1;transl_table=11 NC_017265.1 RefSeq gene 1783114 1783377 . + . ID=gene1639;Name=YPC_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08220;old_locus_tag=YPC_1816 NC_017265.1 Protein Homology CDS 1783114 1783377 . + 0 ID=cds1583;Parent=gene1639;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NC_017265.1 RefSeq gene 1783493 1783738 . - . ID=gene1640;Name=YPC_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08225;old_locus_tag=YPC_1817 NC_017265.1 Protein Homology CDS 1783493 1783738 . - 0 ID=cds1584;Parent=gene1640;Dbxref=Genbank:WP_002217646.1;Name=WP_002217646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217646.1;transl_table=11 NC_017265.1 RefSeq gene 1783961 1784257 . - . ID=gene1641;Name=YPC_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08230;old_locus_tag=YPC_1818 NC_017265.1 Protein Homology CDS 1783961 1784257 . - 0 ID=cds1585;Parent=gene1641;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11 NC_017265.1 RefSeq gene 1784558 1785316 . + . ID=gene1642;Name=YPC_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08235;old_locus_tag=YPC_1819 NC_017265.1 Protein Homology CDS 1784558 1785316 . + 0 ID=cds1586;Parent=gene1642;Dbxref=Genbank:WP_002210642.1;Name=WP_002210642.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002210642.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1785315 1786634 . + . ID=id166;gbkey=repeat_region NC_017265.1 RefSeq gene 1785352 1786560 . - . ID=gene1643;Name=YPC_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08240;old_locus_tag=YPC_1820 NC_017265.1 Protein Homology CDS 1785352 1786560 . - 0 ID=cds1587;Parent=gene1643;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 1786708 1787157 . - . ID=gene1644;Name=YPC_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08245;old_locus_tag=YPC_1821 NC_017265.1 Protein Homology CDS 1786708 1787157 . - 0 ID=cds1588;Parent=gene1644;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11 NC_017265.1 RefSeq gene 1787237 1787779 . - . ID=gene1645;Name=YPC_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08250;old_locus_tag=YPC_1822 NC_017265.1 Protein Homology CDS 1787237 1787779 . - 0 ID=cds1589;Parent=gene1645;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11 NC_017265.1 RefSeq gene 1788010 1789092 . + . ID=gene1646;Name=YPC_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08255;old_locus_tag=YPC_1824 NC_017265.1 Protein Homology CDS 1788010 1789092 . + 0 ID=cds1590;Parent=gene1646;Dbxref=Genbank:WP_002215978.1;Name=WP_002215978.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_002215978.1;transl_table=11 NC_017265.1 RefSeq gene 1789124 1789744 . + . ID=gene1647;Name=YPC_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08260;old_locus_tag=YPC_1825 NC_017265.1 Protein Homology CDS 1789124 1789744 . + 0 ID=cds1591;Parent=gene1647;Dbxref=Genbank:WP_002215979.1;Name=WP_002215979.1;gbkey=CDS;product=sulfate permease;protein_id=WP_002215979.1;transl_table=11 NC_017265.1 RefSeq gene 1789865 1790635 . - . ID=gene1648;Name=YPC_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08265;old_locus_tag=YPC_1826 NC_017265.1 Protein Homology CDS 1789865 1790635 . - 0 ID=cds1592;Parent=gene1648;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11 NC_017265.1 RefSeq gene 1790797 1791012 . + . ID=gene1649;Name=YPC_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08270;old_locus_tag=YPC_1827 NC_017265.1 Protein Homology CDS 1790797 1791012 . + 0 ID=cds1593;Parent=gene1649;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NC_017265.1 RefSeq gene 1791109 1791756 . + . ID=gene1650;Name=YPC_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08275;old_locus_tag=YPC_1828 NC_017265.1 Protein Homology CDS 1791109 1791756 . + 0 ID=cds1594;Parent=gene1650;Dbxref=Genbank:WP_011055515.1;Name=WP_011055515.1;Note=receptor for colicin S4;gbkey=CDS;product=outer membrane protein W;protein_id=WP_011055515.1;transl_table=11 NC_017265.1 RefSeq gene 1791903 1792217 . - . ID=gene1651;Name=YPC_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08280;old_locus_tag=YPC_1829 NC_017265.1 Protein Homology CDS 1791903 1792217 . - 0 ID=cds1595;Parent=gene1651;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11 NC_017265.1 RefSeq gene 1792560 1793366 . - . ID=gene1652;Name=YPC_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08285;old_locus_tag=YPC_1831 NC_017265.1 Protein Homology CDS 1792560 1793366 . - 0 ID=cds1596;Parent=gene1652;Dbxref=Genbank:WP_002210634.1;Name=WP_002210634.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_002210634.1;transl_table=11 NC_017265.1 RefSeq gene 1793366 1794556 . - . ID=gene1653;Name=YPC_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08290;old_locus_tag=YPC_1832 NC_017265.1 Protein Homology CDS 1793366 1794556 . - 0 ID=cds1597;Parent=gene1653;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NC_017265.1 RefSeq gene 1794713 1796140 . - . ID=gene1654;Name=YPC_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08295;old_locus_tag=YPC_1833 NC_017265.1 Protein Homology CDS 1794713 1796140 . - 0 ID=cds1598;Parent=gene1654;Dbxref=Genbank:WP_002228453.1;Name=WP_002228453.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=phosphoribosylanthranilate isomerase;protein_id=WP_002228453.1;transl_table=11 NC_017265.1 RefSeq gene 1796144 1797142 . - . ID=gene1655;Name=YPC_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08300;old_locus_tag=YPC_1834 NC_017265.1 Protein Homology CDS 1796144 1797142 . - 0 ID=cds1599;Parent=gene1655;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11 NC_017265.1 RefSeq gene 1797157 1797735 . - . ID=gene1656;Name=YPC_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08305;old_locus_tag=YPC_1835 NC_017265.1 Protein Homology CDS 1797157 1797735 . - 0 ID=cds1600;Parent=gene1656;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11 NC_017265.1 RefSeq gene 1797735 1799297 . - . ID=gene1657;Name=YPC_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08310;old_locus_tag=YPC_1836 NC_017265.1 Protein Homology CDS 1797735 1799297 . - 0 ID=cds1601;Parent=gene1657;Dbxref=Genbank:WP_002228454.1;Name=WP_002228454.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase subunit I;protein_id=WP_002228454.1;transl_table=11 NC_017265.1 RefSeq gene 1799416 1799478 . - . ID=gene1658;Name=YPC_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08315;old_locus_tag=YPC_1837 NC_017265.1 Protein Homology CDS 1799416 1799478 . - 0 ID=cds1602;Parent=gene1658;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11 NC_017265.1 RefSeq gene 1799507 1799635 . - . ID=gene1659;Name=YPC_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08320 NC_017265.1 Protein Homology CDS 1799507 1799635 . - 0 ID=cds1603;Parent=gene1659;Dbxref=Genbank:WP_002215982.1;Name=WP_002215982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215982.1;transl_table=11 NC_017265.1 RefSeq gene 1799716 1800651 . + . ID=gene1660;Name=YPC_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08325;old_locus_tag=YPC_1838 NC_017265.1 Protein Homology CDS 1799716 1800651 . + 0 ID=cds1604;Parent=gene1660;Dbxref=Genbank:WP_042468427.1;Name=WP_042468427.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_042468427.1;transl_table=11 NC_017265.1 RefSeq gene 1800668 1801288 . + . ID=gene1661;Name=YPC_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08330;old_locus_tag=YPC_1840 NC_017265.1 Protein Homology CDS 1800668 1801288 . + 0 ID=cds1605;Parent=gene1661;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11 NC_017265.1 RefSeq gene 1801635 1802669 . + . ID=gene1662;Name=YPC_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08335;old_locus_tag=YPC_1841 NC_017265.1 Protein Homology CDS 1801635 1802669 . + 0 ID=cds1606;Parent=gene1662;Dbxref=Genbank:WP_002210627.1;Name=WP_002210627.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_002210627.1;transl_table=11 NC_017265.1 RefSeq gene 1802792 1803382 . - . ID=gene1663;Name=YPC_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08340;old_locus_tag=YPC_1842 NC_017265.1 Protein Homology CDS 1802792 1803382 . - 0 ID=cds1607;Parent=gene1663;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11 NC_017265.1 RefSeq gene 1803399 1804160 . - . ID=gene1664;Name=YPC_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08345;old_locus_tag=YPC_1843 NC_017265.1 Protein Homology CDS 1803399 1804160 . - 0 ID=cds1608;Parent=gene1664;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11 NC_017265.1 RefSeq gene 1804332 1805378 . + . ID=gene1665;Name=YPC_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08350;old_locus_tag=YPC_1844 NC_017265.1 Protein Homology CDS 1804332 1805378 . + 0 ID=cds1609;Parent=gene1665;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11 NC_017265.1 RefSeq gene 1805497 1805748 . - . ID=gene1666;Name=YPC_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08355;old_locus_tag=YPC_1846 NC_017265.1 Protein Homology CDS 1805497 1805748 . - 0 ID=cds1610;Parent=gene1666;Dbxref=Genbank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210623.1;transl_table=11 NC_017265.1 RefSeq gene 1805841 1806140 . + . ID=gene1667;Name=YPC_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08360;old_locus_tag=YPC_1847 NC_017265.1 Protein Homology CDS 1805841 1806140 . + 0 ID=cds1611;Parent=gene1667;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NC_017265.1 RefSeq gene 1806167 1808782 . + . ID=gene1668;Name=YPC_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08365;old_locus_tag=YPC_1848 NC_017265.1 Protein Homology CDS 1806167 1808782 . + 0 ID=cds1612;Parent=gene1668;Dbxref=Genbank:WP_002210622.1;Name=WP_002210622.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_002210622.1;transl_table=11 NC_017265.1 RefSeq gene 1809179 1810153 . + . ID=gene1669;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YPC_RS08370;old_locus_tag=YPC_1849 NC_017265.1 Protein Homology CDS 1809179 1810153 . + 0 ID=cds1613;Parent=gene1669;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11 NC_017265.1 RefSeq gene 1810489 1811346 . + . ID=gene1670;Name=YPC_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08375;old_locus_tag=YPC_1850 NC_017265.1 Protein Homology CDS 1810489 1811346 . + 0 ID=cds1614;Parent=gene1670;Dbxref=Genbank:WP_002210620.1;Name=WP_002210620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210620.1;transl_table=11 NC_017265.1 RefSeq gene 1811710 1814382 . + . ID=gene1671;Name=YPC_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08380;old_locus_tag=YPC_1851 NC_017265.1 Protein Homology CDS 1811710 1814382 . + 0 ID=cds1615;Parent=gene1671;Dbxref=Genbank:WP_015683609.1;Name=WP_015683609.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_015683609.1;transl_table=11 NC_017265.1 RefSeq gene 1814546 1815136 . - . ID=gene1672;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YPC_RS08385;old_locus_tag=YPC_1852 NC_017265.1 Protein Homology CDS 1814546 1815136 . - 0 ID=cds1616;Parent=gene1672;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11 NC_017265.1 RefSeq gene 1815642 1816403 . + . ID=gene1673;Name=YPC_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08390;old_locus_tag=YPC_1853 NC_017265.1 Protein Homology CDS 1815642 1816403 . + 0 ID=cds1617;Parent=gene1673;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NC_017265.1 RefSeq gene 1816572 1816883 . + . ID=gene1674;Name=YPC_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08395;old_locus_tag=YPC_1854 NC_017265.1 Protein Homology CDS 1816572 1816883 . + 0 ID=cds1618;Parent=gene1674;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11 NC_017265.1 RefSeq gene 1816890 1818059 . + . ID=gene1675;Name=YPC_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08400;old_locus_tag=YPC_1855 NC_017265.1 Protein Homology CDS 1816890 1818059 . + 0 ID=cds1619;Parent=gene1675;Dbxref=Genbank:WP_002210615.1;Name=WP_002210615.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210615.1;transl_table=11 NC_017265.1 RefSeq gene 1818181 1818480 . - . ID=gene1676;Name=YPC_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08405;old_locus_tag=YPC_1856 NC_017265.1 Protein Homology CDS 1818181 1818480 . - 0 ID=cds1620;Parent=gene1676;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NC_017265.1 RefSeq gene 1818950 1819687 . + . ID=gene1677;Name=YPC_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08410;old_locus_tag=YPC_1857 NC_017265.1 Protein Homology CDS 1818950 1819687 . + 0 ID=cds1621;Parent=gene1677;Dbxref=Genbank:WP_002210613.1;Name=WP_002210613.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_002210613.1;transl_table=11 NC_017265.1 RefSeq gene 1819687 1820013 . + . ID=gene1678;Name=YPC_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08415;old_locus_tag=YPC_1858 NC_017265.1 Protein Homology CDS 1819687 1820013 . + 0 ID=cds1622;Parent=gene1678;Dbxref=Genbank:WP_002210612.1;Name=WP_002210612.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_002210612.1;transl_table=11 NC_017265.1 RefSeq gene 1820252 1820467 . - . ID=gene1679;Name=YPC_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08420;old_locus_tag=YPC_1859 NC_017265.1 Protein Homology CDS 1820252 1820467 . - 0 ID=cds1623;Parent=gene1679;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11 NC_017265.1 RefSeq gene 1820947 1821642 . + . ID=gene1680;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPC_RS08425;old_locus_tag=YPC_1860 NC_017265.1 Protein Homology CDS 1820947 1821642 . + 0 ID=cds1624;Parent=gene1680;Dbxref=Genbank:WP_002210610.1;Name=WP_002210610.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NC_017265.1 RefSeq gene 1821671 1821919 . - . ID=gene1681;Name=YPC_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08430;old_locus_tag=YPC_1861 NC_017265.1 Protein Homology CDS 1821671 1821919 . - 0 ID=cds1625;Parent=gene1681;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11 NC_017265.1 RefSeq gene 1822253 1822918 . + . ID=gene1682;Name=YPC_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08435;old_locus_tag=YPC_1862 NC_017265.1 Protein Homology CDS 1822253 1822918 . + 0 ID=cds1626;Parent=gene1682;Dbxref=Genbank:WP_002215192.1;Name=WP_002215192.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11 NC_017265.1 RefSeq gene 1823035 1823340 . - . ID=gene1683;Name=YPC_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08440;old_locus_tag=YPC_1863 NC_017265.1 Protein Homology CDS 1823035 1823340 . - 0 ID=cds1627;Parent=gene1683;Dbxref=Genbank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210607.1;transl_table=11 NC_017265.1 RefSeq gene 1823333 1825399 . - . ID=gene1684;Name=YPC_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08445;old_locus_tag=YPC_1864 NC_017265.1 Protein Homology CDS 1823333 1825399 . - 0 ID=cds1628;Parent=gene1684;Dbxref=Genbank:WP_002220371.1;Name=WP_002220371.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_002220371.1;transl_table=11 NC_017265.1 RefSeq gene 1825749 1827683 . - . ID=gene1685;Name=YPC_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08450;old_locus_tag=YPC_1865 NC_017265.1 Protein Homology CDS 1825749 1827683 . - 0 ID=cds1629;Parent=gene1685;Dbxref=Genbank:WP_002210605.1;Name=WP_002210605.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_002210605.1;transl_table=11 NC_017265.1 RefSeq gene 1828352 1829662 . + . ID=gene1686;Name=YPC_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08455;old_locus_tag=YPC_1866 NC_017265.1 Protein Homology CDS 1828352 1829662 . + 0 ID=cds1630;Parent=gene1686;Dbxref=Genbank:WP_002210604.1;Name=WP_002210604.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210604.1;transl_table=11 NC_017265.1 RefSeq gene 1829700 1830698 . + . ID=gene1687;Name=YPC_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08460;old_locus_tag=YPC_1867 NC_017265.1 Protein Homology CDS 1829700 1830698 . + 0 ID=cds1631;Parent=gene1687;Dbxref=Genbank:WP_002210603.1;Name=WP_002210603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210603.1;transl_table=11 NC_017265.1 RefSeq gene 1830881 1831522 . - . ID=gene1688;Name=YPC_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08465;old_locus_tag=YPC_1868 NC_017265.1 Protein Homology CDS 1830881 1831522 . - 0 ID=cds1632;Parent=gene1688;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NC_017265.1 RefSeq gene 1831519 1832220 . - . ID=gene1689;Name=YPC_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08470 NC_017265.1 Protein Homology CDS 1831519 1832220 . - 0 ID=cds1633;Parent=gene1689;Dbxref=Genbank:WP_002210601.1;Name=WP_002210601.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_002210601.1;transl_table=11 NC_017265.1 RefSeq gene 1832217 1832846 . - . ID=gene1690;Name=YPC_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08475 NC_017265.1 Protein Homology CDS 1832217 1832846 . - 0 ID=cds1634;Parent=gene1690;Dbxref=Genbank:WP_002210600.1;Name=WP_002210600.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit G;protein_id=WP_002210600.1;transl_table=11 NC_017265.1 RefSeq gene 1832856 1833950 . - . ID=gene1691;Name=YPC_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08480;old_locus_tag=YPC_1871 NC_017265.1 Protein Homology CDS 1832856 1833950 . - 0 ID=cds1635;Parent=gene1691;Dbxref=Genbank:WP_002210599.1;Name=WP_002210599.1;gbkey=CDS;product=electron transporter RnfG;protein_id=WP_002210599.1;transl_table=11 NC_017265.1 RefSeq gene 1834439 1835332 . + . ID=gene1692;Name=YPC_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08485;old_locus_tag=YPC_1872 NC_017265.1 Protein Homology CDS 1834439 1835332 . + 0 ID=cds1636;Parent=gene1692;Dbxref=Genbank:WP_002210598.1;Name=WP_002210598.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210598.1;transl_table=11 NC_017265.1 RefSeq gene 1835437 1837416 . - . ID=gene1693;Name=YPC_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08490;old_locus_tag=YPC_1873 NC_017265.1 Protein Homology CDS 1835437 1837416 . - 0 ID=cds1637;Parent=gene1693;Dbxref=Genbank:WP_002223606.1;Name=WP_002223606.1;gbkey=CDS;product=electron transport complex subunit C;protein_id=WP_002223606.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1835456 1835730 . + . ID=id167;gbkey=repeat_region NC_017265.1 RefSeq gene 1837466 1838032 . - . ID=gene1694;Name=YPC_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08495;old_locus_tag=YPC_1875 NC_017265.1 Protein Homology CDS 1837466 1838032 . - 0 ID=cds1638;Parent=gene1694;Dbxref=Genbank:WP_002210596.1;Name=WP_002210596.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit B;protein_id=WP_002210596.1;transl_table=11 NC_017265.1 RefSeq gene 1838032 1838613 . - . ID=gene1695;Name=YPC_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08500;old_locus_tag=YPC_1876 NC_017265.1 Protein Homology CDS 1838032 1838613 . - 0 ID=cds1639;Parent=gene1695;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11 NC_017265.1 RefSeq gene 1838741 1839184 . - . ID=gene1696;Name=YPC_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08505;old_locus_tag=YPC_1877 NC_017265.1 Protein Homology CDS 1838741 1839184 . - 0 ID=cds1640;Parent=gene1696;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11 NC_017265.1 RefSeq gene 1839659 1841443 . + . ID=gene1697;Name=YPC_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08510;old_locus_tag=YPC_1879 NC_017265.1 Protein Homology CDS 1839659 1841443 . + 0 ID=cds1641;Parent=gene1697;Dbxref=Genbank:WP_002215879.1;Name=WP_002215879.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002215879.1;transl_table=11 NC_017265.1 RefSeq gene 1841496 1841717 . + . ID=gene1698;Name=YPC_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08515 NC_017265.1 GeneMarkS+ CDS 1841496 1841717 . + 0 ID=cds1642;Parent=gene1698;Dbxref=Genbank:WP_002215880.1;Name=WP_002215880.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215880.1;transl_table=11 NC_017265.1 RefSeq gene 1841742 1842743 . + . ID=gene1699;Name=YPC_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08520;old_locus_tag=YPC_1881 NC_017265.1 Protein Homology CDS 1841742 1842743 . + 0 ID=cds1643;Parent=gene1699;Dbxref=Genbank:WP_015683610.1;Name=WP_015683610.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_015683610.1;transl_table=11 NC_017265.1 RefSeq gene 1842743 1843111 . + . ID=gene1700;Name=YPC_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08525;old_locus_tag=YPC_1882 NC_017265.1 Protein Homology CDS 1842743 1843111 . + 0 ID=cds1644;Parent=gene1700;Dbxref=Genbank:WP_002215882.1;Name=WP_002215882.1;gbkey=CDS;product=hemolysin D;protein_id=WP_002215882.1;transl_table=11 NC_017265.1 RefSeq gene 1843113 1845251 . + . ID=gene1701;Name=YPC_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08530;old_locus_tag=YPC_1883 NC_017265.1 Protein Homology CDS 1843113 1845251 . + 0 ID=cds1645;Parent=gene1701;Dbxref=Genbank:WP_002210593.1;Name=WP_002210593.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002210593.1;transl_table=11 NC_017265.1 RefSeq gene 1845441 1846943 . - . ID=gene1702;Name=YPC_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08535;old_locus_tag=YPC_1884 NC_017265.1 Protein Homology CDS 1845441 1846943 . - 0 ID=cds1646;Parent=gene1702;Dbxref=Genbank:WP_002210591.1;Name=WP_002210591.1;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_002210591.1;transl_table=11 NC_017265.1 RefSeq gene 1847027 1848730 . - . ID=gene1703;Name=YPC_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08540;old_locus_tag=YPC_1885 NC_017265.1 Protein Homology CDS 1847027 1848730 . - 0 ID=cds1647;Parent=gene1703;Dbxref=Genbank:WP_002210590.1;Name=WP_002210590.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_002210590.1;transl_table=11 NC_017265.1 RefSeq gene 1849138 1850121 . + . ID=gene1704;Name=YPC_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08545;old_locus_tag=YPC_1886 NC_017265.1 Protein Homology CDS 1849138 1850121 . + 0 ID=cds1648;Parent=gene1704;Dbxref=Genbank:WP_002210589.1;Name=WP_002210589.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NC_017265.1 RefSeq gene 1850219 1851790 . + . ID=gene1705;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YPC_RS08550;old_locus_tag=YPC_1887 NC_017265.1 Protein Homology CDS 1850219 1851790 . + 0 ID=cds1649;Parent=gene1705;Dbxref=Genbank:WP_002210588.1;Name=WP_002210588.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_002210588.1;transl_table=11 NC_017265.1 RefSeq gene 1851808 1852857 . + . ID=gene1706;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YPC_RS08555;old_locus_tag=YPC_1888 NC_017265.1 Protein Homology CDS 1851808 1852857 . + 0 ID=cds1650;Parent=gene1706;Dbxref=Genbank:WP_002210587.1;Name=WP_002210587.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_002210587.1;transl_table=11 NC_017265.1 RefSeq gene 1853078 1854010 . + . ID=gene1707;Name=YPC_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08560;old_locus_tag=YPC_1889 NC_017265.1 Protein Homology CDS 1853078 1854010 . + 0 ID=cds1651;Parent=gene1707;Dbxref=Genbank:WP_002210586.1;Name=WP_002210586.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210586.1;transl_table=11 NC_017265.1 RefSeq gene 1854138 1855187 . + . ID=gene1708;Name=YPC_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08565;old_locus_tag=YPC_1890 NC_017265.1 Protein Homology CDS 1854138 1855187 . + 0 ID=cds1652;Parent=gene1708;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NC_017265.1 RefSeq gene 1855381 1856409 . + . ID=gene1709;Name=YPC_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08570;old_locus_tag=YPC_1891 NC_017265.1 Protein Homology CDS 1855381 1856409 . + 0 ID=cds1653;Parent=gene1709;Dbxref=Genbank:WP_002210584.1;Name=WP_002210584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210584.1;transl_table=11 NC_017265.1 RefSeq gene 1856615 1857214 . + . ID=gene1710;Name=YPC_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08575;old_locus_tag=YPC_1893 NC_017265.1 Protein Homology CDS 1856615 1857214 . + 0 ID=cds1654;Parent=gene1710;Dbxref=Genbank:WP_002210583.1;Name=WP_002210583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210583.1;transl_table=11 NC_017265.1 RefSeq gene 1857263 1858807 . - . ID=gene1711;Name=YPC_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08580;old_locus_tag=YPC_1894 NC_017265.1 Protein Homology CDS 1857263 1858807 . - 0 ID=cds1655;Parent=gene1711;Dbxref=Genbank:WP_002216605.1;Name=WP_002216605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216605.1;transl_table=11 NC_017265.1 RefSeq gene 1859047 1860222 . - . ID=gene1712;Name=YPC_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08585;old_locus_tag=YPC_1895 NC_017265.1 Protein Homology CDS 1859047 1860222 . - 0 ID=cds1656;Parent=gene1712;Dbxref=Genbank:WP_002210579.1;Name=WP_002210579.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_002210579.1;transl_table=11 NC_017265.1 RefSeq gene 1860506 1861903 . + . ID=gene1713;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YPC_RS08590;old_locus_tag=YPC_1896 NC_017265.1 Protein Homology CDS 1860506 1861903 . + 0 ID=cds1657;Parent=gene1713;Dbxref=Genbank:WP_002210578.1;Name=WP_002210578.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase class II;protein_id=WP_002210578.1;transl_table=11 NC_017265.1 RefSeq gene 1861983 1862918 . - . ID=gene1714;Name=YPC_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08595;old_locus_tag=YPC_1897 NC_017265.1 Protein Homology CDS 1861983 1862918 . - 0 ID=cds1658;Parent=gene1714;Dbxref=Genbank:WP_002227921.1;Name=WP_002227921.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_002227921.1;transl_table=11 NC_017265.1 RefSeq gene 1863123 1864421 . - . ID=gene1715;Name=YPC_RS08600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08600;old_locus_tag=YPC_1898;pseudo=true NC_017265.1 Protein Homology CDS 1863123 1864421 . - 0 ID=cds1659;Parent=gene1715;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1863303..1863305)%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 1864634 1865512 . + . ID=gene1716;Name=YPC_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08605;old_locus_tag=YPC_1899 NC_017265.1 Protein Homology CDS 1864634 1865512 . + 0 ID=cds1660;Parent=gene1716;Dbxref=Genbank:WP_002220360.1;Name=WP_002220360.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220360.1;transl_table=11 NC_017265.1 RefSeq gene 1865726 1866943 . + . ID=gene1717;Name=YPC_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08610;old_locus_tag=YPC_1900 NC_017265.1 Protein Homology CDS 1865726 1866943 . + 0 ID=cds1661;Parent=gene1717;Dbxref=Genbank:WP_002210576.1;Name=WP_002210576.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210576.1;transl_table=11 NC_017265.1 RefSeq gene 1867167 1867835 . + . ID=gene1718;Name=YPC_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08615;old_locus_tag=YPC_1902 NC_017265.1 Protein Homology CDS 1867167 1867835 . + 0 ID=cds1662;Parent=gene1718;Dbxref=Genbank:WP_002210575.1;Name=WP_002210575.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002210575.1;transl_table=11 NC_017265.1 RefSeq gene 1867958 1869238 . - . ID=gene1719;Name=YPC_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08620;old_locus_tag=YPC_1903 NC_017265.1 Protein Homology CDS 1867958 1869238 . - 0 ID=cds1663;Parent=gene1719;Dbxref=Genbank:WP_002210574.1;Name=WP_002210574.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_002210574.1;transl_table=11 NC_017265.1 RefSeq gene 1869606 1869716 . - . ID=gene1720;Name=YPC_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08625 NC_017265.1 Protein Homology CDS 1869606 1869716 . - 0 ID=cds1664;Parent=gene1720;Dbxref=Genbank:WP_002214514.1;Name=WP_002214514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214514.1;transl_table=11 NC_017265.1 RefSeq gene 1869838 1870854 . - . ID=gene1721;Name=YPC_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08630;old_locus_tag=YPC_1904 NC_017265.1 Protein Homology CDS 1869838 1870854 . - 0 ID=cds1665;Parent=gene1721;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NC_017265.1 RefSeq gene 1870918 1871388 . - . ID=gene1722;Name=YPC_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08635;old_locus_tag=YPC_1905 NC_017265.1 Protein Homology CDS 1870918 1871388 . - 0 ID=cds1666;Parent=gene1722;Dbxref=Genbank:WP_002211037.1;Name=WP_002211037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211037.1;transl_table=11 NC_017265.1 RefSeq gene 1871532 1871882 . - . ID=gene1723;Name=YPC_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08640;old_locus_tag=YPC_1906 NC_017265.1 Protein Homology CDS 1871532 1871882 . - 0 ID=cds1667;Parent=gene1723;Dbxref=Genbank:WP_002211036.1;Name=WP_002211036.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211036.1;transl_table=11 NC_017265.1 RefSeq gene 1872321 1873352 . + . ID=gene1724;Name=YPC_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08645;old_locus_tag=YPC_1907 NC_017265.1 Protein Homology CDS 1872321 1873352 . + 0 ID=cds1668;Parent=gene1724;Dbxref=Genbank:WP_002211035.1;Name=WP_002211035.1;gbkey=CDS;product=myristoyl transferase;protein_id=WP_002211035.1;transl_table=11 NC_017265.1 RefSeq gene 1873356 1874177 . + . ID=gene1725;Name=YPC_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08650;old_locus_tag=YPC_1908 NC_017265.1 Protein Homology CDS 1873356 1874177 . + 0 ID=cds1669;Parent=gene1725;Dbxref=Genbank:WP_002211034.1;Name=WP_002211034.1;gbkey=CDS;product=sulfonate ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NC_017265.1 RefSeq gene 1874187 1875006 . + . ID=gene1726;Name=YPC_RS08655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08655;pseudo=true NC_017265.1 Protein Homology CDS 1874187 1875006 . + 0 ID=cds1670;Parent=gene1726;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sulfonate ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1875431 1876921 . - . ID=gene1727;Name=YPC_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08660;old_locus_tag=YPC_1910 NC_017265.1 Protein Homology CDS 1875431 1876921 . - 0 ID=cds1671;Parent=gene1727;Dbxref=Genbank:WP_002223601.1;Name=WP_002223601.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_002223601.1;transl_table=11 NC_017265.1 RefSeq gene 1877127 1878560 . + . ID=gene1728;Name=YPC_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08665;old_locus_tag=YPC_1912 NC_017265.1 Protein Homology CDS 1877127 1878560 . + 0 ID=cds1672;Parent=gene1728;Dbxref=Genbank:WP_002211031.1;Name=WP_002211031.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211031.1;transl_table=11 NC_017265.1 RefSeq gene 1878565 1881636 . + . ID=gene1729;Name=YPC_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08670 NC_017265.1 Protein Homology CDS 1878565 1881636 . + 0 ID=cds1673;Parent=gene1729;Dbxref=Genbank:WP_042468439.1;Name=WP_042468439.1;gbkey=CDS;product=virulence factor SrfB;protein_id=WP_042468439.1;transl_table=11 NC_017265.1 RefSeq gene 1881633 1884108 . + . ID=gene1730;Name=YPC_RS08675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08675;pseudo=true NC_017265.1 Protein Homology CDS 1881633 1884108 . + 0 ID=cds1674;Parent=gene1730;exception=annotated by transcript or proteomic data;gbkey=CDS;product=virulence factor;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1884277 1885071 . - . ID=gene1731;Name=YPC_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08680;old_locus_tag=YPC_1916 NC_017265.1 Protein Homology CDS 1884277 1885071 . - 0 ID=cds1675;Parent=gene1731;Dbxref=Genbank:WP_002220345.1;Name=WP_002220345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220345.1;transl_table=11 NC_017265.1 RefSeq gene 1885673 1887339 . + . ID=gene1732;Name=YPC_RS08685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08685;pseudo=true NC_017265.1 Protein Homology CDS 1885673 1887339 . + 0 ID=cds1676;Parent=gene1732;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acetolactate synthase catalytic subunit;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1887341 1887643 . + . ID=gene1733;Name=YPC_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08690;old_locus_tag=YPC_1919 NC_017265.1 Protein Homology CDS 1887341 1887643 . + 0 ID=cds1677;Parent=gene1733;Dbxref=Genbank:WP_002211026.1;Name=WP_002211026.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211026.1;transl_table=11 NC_017265.1 RefSeq gene 1887710 1888384 . - . ID=gene1734;Name=YPC_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08695;old_locus_tag=YPC_1920 NC_017265.1 Protein Homology CDS 1887710 1888384 . - 0 ID=cds1678;Parent=gene1734;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11 NC_017265.1 RefSeq gene 1888515 1889900 . - . ID=gene1735;Name=YPC_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08700 NC_017265.1 Protein Homology CDS 1888515 1889900 . - 0 ID=cds1679;Parent=gene1735;Dbxref=Genbank:WP_042468442.1;Name=WP_042468442.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468442.1;transl_table=11 NC_017265.1 RefSeq gene 1889900 1890911 . - . ID=gene1736;Name=YPC_RS08705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08705;pseudo=true NC_017265.1 Protein Homology CDS 1889900 1890911 . - 0 ID=cds1680;Parent=gene1736;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1891457 1892902 . - . ID=gene1737;Name=YPC_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08710;old_locus_tag=YPC_1922 NC_017265.1 Protein Homology CDS 1891457 1892902 . - 0 ID=cds1681;Parent=gene1737;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NC_017265.1 RefSeq gene 1893143 1893661 . + . ID=gene1738;Name=YPC_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08715;old_locus_tag=YPC_1923 NC_017265.1 Protein Homology CDS 1893143 1893661 . + 0 ID=cds1682;Parent=gene1738;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11 NC_017265.1 RefSeq gene 1893734 1894486 . + . ID=gene1739;Name=YPC_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08720;old_locus_tag=YPC_1924 NC_017265.1 Protein Homology CDS 1893734 1894486 . + 0 ID=cds1683;Parent=gene1739;Dbxref=Genbank:WP_002211022.1;Name=WP_002211022.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate and nitrate reduction regulatory protein;protein_id=WP_002211022.1;transl_table=11 NC_017265.1 RefSeq gene 1894621 1895577 . + . ID=gene1740;Name=YPC_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08725;old_locus_tag=YPC_1925 NC_017265.1 Protein Homology CDS 1894621 1895577 . + 0 ID=cds1684;Parent=gene1740;Dbxref=Genbank:WP_002228471.1;Name=WP_002228471.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein E;protein_id=WP_002228471.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1895632 1895806 . + . ID=id168;gbkey=repeat_region NC_017265.1 RefSeq gene 1895852 1897246 . - . ID=gene1741;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YPC_RS08730;old_locus_tag=YPC_1928 NC_017265.1 Protein Homology CDS 1895852 1897246 . - 0 ID=cds1685;Parent=gene1741;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11 NC_017265.1 RefSeq gene 1897319 1898845 . - . ID=gene1742;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YPC_RS08735;old_locus_tag=YPC_1929 NC_017265.1 Protein Homology CDS 1897319 1898845 . - 0 ID=cds1686;Parent=gene1742;Dbxref=Genbank:WP_002211019.1;Name=WP_002211019.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_002211019.1;transl_table=11 NC_017265.1 RefSeq gene 1898966 1899169 . - . ID=gene1743;Name=YPC_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08740;old_locus_tag=YPC_1930 NC_017265.1 Protein Homology CDS 1898966 1899169 . - 0 ID=cds1687;Parent=gene1743;Dbxref=Genbank:WP_002227912.1;Name=WP_002227912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227912.1;transl_table=11 NC_017265.1 RefSeq gene 1899375 1900328 . + . ID=gene1744;Name=YPC_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08745;old_locus_tag=YPC_1931 NC_017265.1 Protein Homology CDS 1899375 1900328 . + 0 ID=cds1688;Parent=gene1744;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11 NC_017265.1 RefSeq gene 1900598 1901989 . + . ID=gene1745;Name=YPC_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08750;old_locus_tag=YPC_1932 NC_017265.1 Protein Homology CDS 1900598 1901989 . + 0 ID=cds1689;Parent=gene1745;Dbxref=Genbank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_002211017.1;transl_table=11 NC_017265.1 RefSeq gene 1902013 1902429 . - . ID=gene1746;Name=YPC_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08755;old_locus_tag=YPC_1933 NC_017265.1 Protein Homology CDS 1902013 1902429 . - 0 ID=cds1690;Parent=gene1746;Dbxref=Genbank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NC_017265.1 RefSeq gene 1902726 1903472 . + . ID=gene1747;Name=YPC_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08760;old_locus_tag=YPC_1934 NC_017265.1 Protein Homology CDS 1902726 1903472 . + 0 ID=cds1691;Parent=gene1747;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11 NC_017265.1 RefSeq gene 1903521 1904777 . + . ID=gene1748;Name=YPC_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08765;old_locus_tag=YPC_1935 NC_017265.1 Protein Homology CDS 1903521 1904777 . + 0 ID=cds1692;Parent=gene1748;Dbxref=Genbank:WP_002354278.1;Name=WP_002354278.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002354278.1;transl_table=11 NC_017265.1 RefSeq gene 1904871 1906370 . + . ID=gene1749;Name=YPC_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08770;old_locus_tag=YPC_1936 NC_017265.1 Protein Homology CDS 1904871 1906370 . + 0 ID=cds1693;Parent=gene1749;Dbxref=Genbank:WP_002211014.1;Name=WP_002211014.1;gbkey=CDS;product=peptidase M32;protein_id=WP_002211014.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1906382 1907099 . + . ID=id169;gbkey=repeat_region NC_017265.1 RefSeq gene 1906492 1906950 . - . ID=gene1750;Name=YPC_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08775;old_locus_tag=YPC_1937 NC_017265.1 Protein Homology CDS 1906492 1906950 . - 0 ID=cds1694;Parent=gene1750;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 1906940 1907110 . - . ID=gene1751;Name=YPC_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08780 NC_017265.1 Protein Homology CDS 1906940 1907110 . - 0 ID=cds1695;Parent=gene1751;Dbxref=Genbank:WP_025470768.1;Name=WP_025470768.1;gbkey=CDS;product=transposase;protein_id=WP_025470768.1;transl_table=11 NC_017265.1 RefSeq gene 1907920 1910544 . + . ID=gene1752;Name=YPC_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08785;old_locus_tag=YPC_1939 NC_017265.1 Protein Homology CDS 1907920 1910544 . + 0 ID=cds1696;Parent=gene1752;Dbxref=Genbank:WP_002211013.1;Name=WP_002211013.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_002211013.1;transl_table=11 NC_017265.1 RefSeq gene 1910547 1910903 . + . ID=gene1753;Name=YPC_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08790;old_locus_tag=YPC_1940 NC_017265.1 Protein Homology CDS 1910547 1910903 . + 0 ID=cds1697;Parent=gene1753;Dbxref=Genbank:WP_002227910.1;Name=WP_002227910.1;gbkey=CDS;product=DNA gyrase;protein_id=WP_002227910.1;transl_table=11 NC_017265.1 RefSeq gene 1911007 1911165 . - . ID=gene1754;Name=YPC_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08795;old_locus_tag=YPC_1941 NC_017265.1 Protein Homology CDS 1911007 1911165 . - 0 ID=cds1698;Parent=gene1754;Dbxref=Genbank:WP_002214618.1;Name=WP_002214618.1;gbkey=CDS;product=invertase;protein_id=WP_002214618.1;transl_table=11 NC_017265.1 RefSeq gene 1911351 1911886 . - . ID=gene1755;Name=YPC_RS08800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS08800;old_locus_tag=YPC_1943;pseudo=true NC_017265.1 Protein Homology CDS 1911351 1911886 . - 0 ID=cds1699;Parent=gene1755;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cytochrome B;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1912281 1912493 . + . ID=gene1756;Name=YPC_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08805;old_locus_tag=YPC_1944 NC_017265.1 Protein Homology CDS 1912281 1912493 . + 0 ID=cds1700;Parent=gene1756;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11 NC_017265.1 RefSeq gene 1912490 1912804 . + . ID=gene1757;Name=YPC_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08810;old_locus_tag=YPC_1945 NC_017265.1 Protein Homology CDS 1912490 1912804 . + 0 ID=cds1701;Parent=gene1757;Dbxref=Genbank:WP_002228477.1;Name=WP_002228477.1;gbkey=CDS;product=acid-shock protein;protein_id=WP_002228477.1;transl_table=11 NC_017265.1 RefSeq gene 1913138 1913974 . + . ID=gene1758;Name=YPC_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08815;old_locus_tag=YPC_1948 NC_017265.1 Protein Homology CDS 1913138 1913974 . + 0 ID=cds1702;Parent=gene1758;Dbxref=Genbank:WP_002211008.1;Name=WP_002211008.1;gbkey=CDS;product=peptidase;protein_id=WP_002211008.1;transl_table=11 NC_017265.1 RefSeq gene 1914030 1914353 . - . ID=gene1759;Name=YPC_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08820;old_locus_tag=YPC_1949 NC_017265.1 Protein Homology CDS 1914030 1914353 . - 0 ID=cds1703;Parent=gene1759;Dbxref=Genbank:WP_015683613.1;Name=WP_015683613.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_015683613.1;transl_table=11 NC_017265.1 RefSeq gene 1914350 1914679 . - . ID=gene1760;Name=YPC_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08825;old_locus_tag=YPC_1950 NC_017265.1 Protein Homology CDS 1914350 1914679 . - 0 ID=cds1704;Parent=gene1760;Dbxref=Genbank:WP_002214609.1;Name=WP_002214609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214609.1;transl_table=11 NC_017265.1 RefSeq gene 1915018 1918860 . - . ID=gene1761;Name=YPC_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08830;old_locus_tag=YPC_1951 NC_017265.1 Protein Homology CDS 1915018 1918860 . - 0 ID=cds1705;Parent=gene1761;Dbxref=Genbank:WP_002214608.1;Name=WP_002214608.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_002214608.1;transl_table=11 NC_017265.1 RefSeq gene 1919328 1919933 . + . ID=gene1762;Name=YPC_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08835;old_locus_tag=YPC_1952 NC_017265.1 Protein Homology CDS 1919328 1919933 . + 0 ID=cds1706;Parent=gene1762;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NC_017265.1 RefSeq gene 1920054 1921010 . - . ID=gene1763;Name=YPC_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08840;old_locus_tag=YPC_1953 NC_017265.1 Protein Homology CDS 1920054 1921010 . - 0 ID=cds1707;Parent=gene1763;Dbxref=Genbank:WP_002211003.1;Name=WP_002211003.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211003.1;transl_table=11 NC_017265.1 RefSeq gene 1921220 1922611 . + . ID=gene1764;Name=YPC_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08845;old_locus_tag=YPC_1954 NC_017265.1 Protein Homology CDS 1921220 1922611 . + 0 ID=cds1708;Parent=gene1764;Dbxref=Genbank:WP_002211002.1;Name=WP_002211002.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_002211002.1;transl_table=11 NC_017265.1 RefSeq gene 1922830 1923201 . - . ID=gene1765;Name=YPC_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08850;old_locus_tag=YPC_1955 NC_017265.1 Protein Homology CDS 1922830 1923201 . - 0 ID=cds1709;Parent=gene1765;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11 NC_017265.1 RefSeq gene 1923211 1923405 . - . ID=gene1766;Name=YPC_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08855;old_locus_tag=YPC_1956 NC_017265.1 Protein Homology CDS 1923211 1923405 . - 0 ID=cds1710;Parent=gene1766;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11 NC_017265.1 RefSeq gene 1923402 1926098 . - . ID=gene1767;Name=YPC_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08860;old_locus_tag=YPC_1957 NC_017265.1 Protein Homology CDS 1923402 1926098 . - 0 ID=cds1711;Parent=gene1767;Dbxref=Genbank:WP_002210999.1;Name=WP_002210999.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210999.1;transl_table=11 NC_017265.1 RefSeq gene 1926364 1927356 . + . ID=gene1768;Name=YPC_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08865;old_locus_tag=YPC_1958 NC_017265.1 Protein Homology CDS 1926364 1927356 . + 0 ID=cds1712;Parent=gene1768;Dbxref=Genbank:WP_002210998.1;Name=WP_002210998.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210998.1;transl_table=11 NC_017265.1 RefSeq gene 1927426 1927878 . + . ID=gene1769;Name=YPC_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08870;old_locus_tag=YPC_1959 NC_017265.1 Protein Homology CDS 1927426 1927878 . + 0 ID=cds1713;Parent=gene1769;Dbxref=Genbank:WP_002214605.1;Name=WP_002214605.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_002214605.1;transl_table=11 NC_017265.1 RefSeq gene 1927936 1928247 . - . ID=gene1770;Name=YPC_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08875;old_locus_tag=YPC_1960 NC_017265.1 Protein Homology CDS 1927936 1928247 . - 0 ID=cds1714;Parent=gene1770;Dbxref=Genbank:WP_002210996.1;Name=WP_002210996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210996.1;transl_table=11 NC_017265.1 RefSeq gene 1928562 1929221 . + . ID=gene1771;Name=YPC_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08880;old_locus_tag=YPC_1961 NC_017265.1 Protein Homology CDS 1928562 1929221 . + 0 ID=cds1715;Parent=gene1771;Dbxref=Genbank:WP_015683614.1;Name=WP_015683614.1;gbkey=CDS;product=methyltransferase;protein_id=WP_015683614.1;transl_table=11 NC_017265.1 RefSeq gene 1929281 1929613 . - . ID=gene1772;Name=YPC_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08885;old_locus_tag=YPC_1962 NC_017265.1 Protein Homology CDS 1929281 1929613 . - 0 ID=cds1716;Parent=gene1772;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11 NC_017265.1 RefSeq gene 1930092 1933625 . + . ID=gene1773;Name=YPC_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08890;old_locus_tag=YPC_1963 NC_017265.1 Protein Homology CDS 1930092 1933625 . + 0 ID=cds1717;Parent=gene1773;Dbxref=Genbank:WP_002210993.1;Name=WP_002210993.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_002210993.1;transl_table=11 NC_017265.1 RefSeq gene 1933900 1934841 . + . ID=gene1774;Name=YPC_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08895;old_locus_tag=YPC_1964 NC_017265.1 Protein Homology CDS 1933900 1934841 . + 0 ID=cds1718;Parent=gene1774;Dbxref=Genbank:WP_002210992.1;Name=WP_002210992.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_002210992.1;transl_table=11 NC_017265.1 RefSeq gene 1935112 1936116 . + . ID=gene1775;Name=YPC_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08900;old_locus_tag=YPC_1965 NC_017265.1 Protein Homology CDS 1935112 1936116 . + 0 ID=cds1719;Parent=gene1775;Dbxref=Genbank:WP_002210991.1;Name=WP_002210991.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002210991.1;transl_table=11 NC_017265.1 RefSeq gene 1936428 1937267 . + . ID=gene1776;Name=YPC_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08905;old_locus_tag=YPC_1967 NC_017265.1 Protein Homology CDS 1936428 1937267 . + 0 ID=cds1720;Parent=gene1776;Dbxref=Genbank:WP_002210990.1;Name=WP_002210990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210990.1;transl_table=11 NC_017265.1 RefSeq gene 1937317 1937526 . - . ID=gene1777;Name=YPC_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08910 NC_017265.1 Protein Homology CDS 1937317 1937526 . - 0 ID=cds1721;Parent=gene1777;Dbxref=Genbank:WP_002223628.1;Name=WP_002223628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223628.1;transl_table=11 NC_017265.1 RefSeq gene 1937641 1938624 . - . ID=gene1778;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YPC_RS08915;old_locus_tag=YPC_1968 NC_017265.1 Protein Homology CDS 1937641 1938624 . - 0 ID=cds1722;Parent=gene1778;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NC_017265.1 RefSeq gene 1938867 1940483 . - . ID=gene1779;Name=YPC_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08920;old_locus_tag=YPC_1969 NC_017265.1 Protein Homology CDS 1938867 1940483 . - 0 ID=cds1723;Parent=gene1779;Dbxref=Genbank:WP_002210987.1;Name=WP_002210987.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11 NC_017265.1 RefSeq gene 1940924 1941631 . + . ID=gene1780;Name=YPC_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08925;old_locus_tag=YPC_1970 NC_017265.1 Protein Homology CDS 1940924 1941631 . + 0 ID=cds1724;Parent=gene1780;Dbxref=Genbank:WP_042468802.1;Name=WP_042468802.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_042468802.1;transl_table=11 NC_017265.1 RefSeq gene 1941673 1942647 . - . ID=gene1781;Name=YPC_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08930;old_locus_tag=YPC_1971 NC_017265.1 Protein Homology CDS 1941673 1942647 . - 0 ID=cds1725;Parent=gene1781;Dbxref=Genbank:WP_015683616.1;Name=WP_015683616.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=L-Ala-D/L-Glu epimerase;protein_id=WP_015683616.1;transl_table=11 NC_017265.1 RefSeq gene 1942810 1943313 . + . ID=gene1782;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YPC_RS08935;old_locus_tag=YPC_1972 NC_017265.1 Protein Homology CDS 1942810 1943313 . + 0 ID=cds1726;Parent=gene1782;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1943412 1944134 . + . ID=id170;gbkey=repeat_region NC_017265.1 RefSeq gene 1943566 1944024 . + . ID=gene1783;Name=YPC_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08940;old_locus_tag=YPC_1974 NC_017265.1 Protein Homology CDS 1943566 1944024 . + 0 ID=cds1727;Parent=gene1783;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 1944171 1945748 . - . ID=gene1784;Name=YPC_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08945;old_locus_tag=YPC_1975 NC_017265.1 Protein Homology CDS 1944171 1945748 . - 0 ID=cds1728;Parent=gene1784;Dbxref=Genbank:WP_002210983.1;Name=WP_002210983.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210983.1;transl_table=11 NC_017265.1 RefSeq gene 1946070 1946516 . + . ID=gene1785;Name=YPC_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08950;old_locus_tag=YPC_1976 NC_017265.1 Protein Homology CDS 1946070 1946516 . + 0 ID=cds1729;Parent=gene1785;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11 NC_017265.1 RefSeq gene 1946578 1947036 . + . ID=gene1786;Name=YPC_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08955;old_locus_tag=YPC_1977 NC_017265.1 Protein Homology CDS 1946578 1947036 . + 0 ID=cds1730;Parent=gene1786;Dbxref=Genbank:WP_002210981.1;Name=WP_002210981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210981.1;transl_table=11 NC_017265.1 RefSeq gene 1947046 1948107 . - . ID=gene1787;Name=YPC_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08960;old_locus_tag=YPC_1978 NC_017265.1 Protein Homology CDS 1947046 1948107 . - 0 ID=cds1731;Parent=gene1787;Dbxref=Genbank:WP_002210980.1;Name=WP_002210980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210980.1;transl_table=11 NC_017265.1 RefSeq gene 1948104 1949501 . - . ID=gene1788;Name=YPC_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08965;old_locus_tag=YPC_1979 NC_017265.1 Protein Homology CDS 1948104 1949501 . - 0 ID=cds1732;Parent=gene1788;Dbxref=Genbank:WP_002210979.1;Name=WP_002210979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210979.1;transl_table=11 NC_017265.1 RefSeq gene 1949482 1949721 . - . ID=gene1789;Name=YPC_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08970;old_locus_tag=YPC_1980 NC_017265.1 Protein Homology CDS 1949482 1949721 . - 0 ID=cds1733;Parent=gene1789;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11 NC_017265.1 RefSeq gene 1949809 1950168 . - . ID=gene1790;Name=YPC_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08975;old_locus_tag=YPC_1981 NC_017265.1 Protein Homology CDS 1949809 1950168 . - 0 ID=cds1734;Parent=gene1790;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11 NC_017265.1 RefSeq gene 1950168 1950395 . - . ID=gene1791;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YPC_RS08980;old_locus_tag=YPC_1982 NC_017265.1 Protein Homology CDS 1950168 1950395 . - 0 ID=cds1735;Parent=gene1791;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11 NC_017265.1 RefSeq gene 1950557 1951222 . - . ID=gene1792;Name=YPC_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08985;old_locus_tag=YPC_1983 NC_017265.1 Protein Homology CDS 1950557 1951222 . - 0 ID=cds1736;Parent=gene1792;Dbxref=Genbank:WP_002210975.1;Name=WP_002210975.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_002210975.1;transl_table=11 NC_017265.1 RefSeq gene 1951467 1952495 . + . ID=gene1793;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YPC_RS08990;old_locus_tag=YPC_1984 NC_017265.1 Protein Homology CDS 1951467 1952495 . + 0 ID=cds1737;Parent=gene1793;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1952549 1953270 . + . ID=id171;gbkey=repeat_region NC_017265.1 RefSeq gene 1952660 1953118 . - . ID=gene1794;Name=YPC_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS08995;old_locus_tag=YPC_1985 NC_017265.1 Protein Homology CDS 1952660 1953118 . - 0 ID=cds1738;Parent=gene1794;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 1953108 1953275 . - . ID=gene1795;Name=YPC_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09000 NC_017265.1 Protein Homology CDS 1953108 1953275 . - 0 ID=cds1739;Parent=gene1795;Dbxref=Genbank:WP_002430114.1;Name=WP_002430114.1;gbkey=CDS;product=invasin;protein_id=WP_002430114.1;transl_table=11 NC_017265.1 RefSeq gene 1953462 1953640 . + . ID=gene1796;Name=YPC_RS09005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS09005;pseudo=true NC_017265.1 Protein Homology CDS 1953462 1953640 . + 0 ID=cds1740;Parent=gene1796;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 1953776 1955422 . + . ID=gene1797;Name=YPC_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09010;old_locus_tag=YPC_1987 NC_017265.1 Protein Homology CDS 1953776 1955422 . + 0 ID=cds1741;Parent=gene1797;Dbxref=Genbank:WP_002210973.1;Name=WP_002210973.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210973.1;transl_table=11 NC_017265.1 RefSeq gene 1955419 1956384 . + . ID=gene1798;Name=YPC_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09015;old_locus_tag=YPC_1988 NC_017265.1 Protein Homology CDS 1955419 1956384 . + 0 ID=cds1742;Parent=gene1798;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11 NC_017265.1 RefSeq gene 1956371 1957261 . + . ID=gene1799;Name=YPC_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09020;old_locus_tag=YPC_1989 NC_017265.1 Protein Homology CDS 1956371 1957261 . + 0 ID=cds1743;Parent=gene1799;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11 NC_017265.1 RefSeq gene 1957261 1958253 . + . ID=gene1800;Name=YPC_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09025 NC_017265.1 Protein Homology CDS 1957261 1958253 . + 0 ID=cds1744;Parent=gene1800;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11 NC_017265.1 RefSeq gene 1958253 1959068 . + . ID=gene1801;Name=YPC_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09030 NC_017265.1 Protein Homology CDS 1958253 1959068 . + 0 ID=cds1745;Parent=gene1801;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11 NC_017265.1 RefSeq gene 1959458 1960738 . + . ID=gene1802;Name=YPC_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09035;old_locus_tag=YPC_1992 NC_017265.1 Protein Homology CDS 1959458 1960738 . + 0 ID=cds1746;Parent=gene1802;Dbxref=Genbank:WP_002210967.1;Name=WP_002210967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210967.1;transl_table=11 NC_017265.1 RefSeq gene 1961381 1962886 . + . ID=gene1803;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=YPC_RS09040;old_locus_tag=YPC_1994 NC_017265.1 Protein Homology CDS 1961381 1962886 . + 0 ID=cds1747;Parent=gene1803;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11 NC_017265.1 RefSeq gene 1963142 1963732 . + . ID=gene1804;Name=YPC_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09045;old_locus_tag=YPC_1995 NC_017265.1 Protein Homology CDS 1963142 1963732 . + 0 ID=cds1748;Parent=gene1804;Dbxref=Genbank:WP_015683617.1;Name=WP_015683617.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683617.1;transl_table=11 NC_017265.1 RefSeq gene 1963978 1964241 . + . ID=gene1805;Name=YPC_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09050;old_locus_tag=YPC_1996 NC_017265.1 Protein Homology CDS 1963978 1964241 . + 0 ID=cds1749;Parent=gene1805;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11 NC_017265.1 RefSeq gene 1964486 1965091 . + . ID=gene1806;Name=YPC_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09055;old_locus_tag=YPC_1997 NC_017265.1 Protein Homology CDS 1964486 1965091 . + 0 ID=cds1750;Parent=gene1806;Dbxref=Genbank:WP_002210962.1;Name=WP_002210962.1;gbkey=CDS;product=glutathionine S-transferase;protein_id=WP_002210962.1;transl_table=11 NC_017265.1 RefSeq gene 1965151 1966011 . - . ID=gene1807;Name=YPC_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09060;old_locus_tag=YPC_1998 NC_017265.1 Protein Homology CDS 1965151 1966011 . - 0 ID=cds1751;Parent=gene1807;Dbxref=Genbank:WP_002210961.1;Name=WP_002210961.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_002210961.1;transl_table=11 NC_017265.1 RefSeq gene 1966166 1967440 . - . ID=gene1808;Name=YPC_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09065;old_locus_tag=YPC_1999 NC_017265.1 Protein Homology CDS 1966166 1967440 . - 0 ID=cds1752;Parent=gene1808;Dbxref=Genbank:WP_002210960.1;Name=WP_002210960.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_002210960.1;transl_table=11 NC_017265.1 RefSeq gene 1967622 1968275 . - . ID=gene1809;Name=YPC_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09070;old_locus_tag=YPC_2000 NC_017265.1 Protein Homology CDS 1967622 1968275 . - 0 ID=cds1753;Parent=gene1809;Dbxref=Genbank:WP_002210959.1;Name=WP_002210959.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NC_017265.1 RefSeq gene 1968366 1968680 . - . ID=gene1810;Name=YPC_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09075;old_locus_tag=YPC_2001 NC_017265.1 Protein Homology CDS 1968366 1968680 . - 0 ID=cds1754;Parent=gene1810;Dbxref=Genbank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002218323.1;transl_table=11 NC_017265.1 RefSeq gene 1968738 1969850 . - . ID=gene1811;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=YPC_RS09080;old_locus_tag=YPC_2002 NC_017265.1 Protein Homology CDS 1968738 1969850 . - 0 ID=cds1755;Parent=gene1811;Dbxref=Genbank:WP_002218322.1;Name=WP_002218322.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NC_017265.1 RefSeq gene 1970406 1970873 . + . ID=gene1812;Name=YPC_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09085;old_locus_tag=YPC_2004 NC_017265.1 Protein Homology CDS 1970406 1970873 . + 0 ID=cds1756;Parent=gene1812;Dbxref=Genbank:WP_002210956.1;Name=WP_002210956.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210956.1;transl_table=11 NC_017265.1 RefSeq gene 1971017 1971448 . - . ID=gene1813;Name=YPC_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09090;old_locus_tag=YPC_2005 NC_017265.1 Protein Homology CDS 1971017 1971448 . - 0 ID=cds1757;Parent=gene1813;Dbxref=Genbank:WP_002210955.1;Name=WP_002210955.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_002210955.1;transl_table=11 NC_017265.1 RefSeq gene 1972012 1973592 . + . ID=gene1814;Name=YPC_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09095;old_locus_tag=YPC_2006 NC_017265.1 Protein Homology CDS 1972012 1973592 . + 0 ID=cds1758;Parent=gene1814;Dbxref=Genbank:WP_042468452.1;Name=WP_042468452.1;gbkey=CDS;product=hydrolase;protein_id=WP_042468452.1;transl_table=11 NC_017265.1 RefSeq gene 1973815 1974414 . + . ID=gene1815;Name=YPC_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09100;old_locus_tag=YPC_2007 NC_017265.1 Protein Homology CDS 1973815 1974414 . + 0 ID=cds1759;Parent=gene1815;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NC_017265.1 RefSeq gene 1974502 1975599 . + . ID=gene1816;Name=YPC_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09105;old_locus_tag=YPC_2009 NC_017265.1 Protein Homology CDS 1974502 1975599 . + 0 ID=cds1760;Parent=gene1816;Dbxref=Genbank:WP_002210950.1;Name=WP_002210950.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_002210950.1;transl_table=11 NC_017265.1 RefSeq gene 1975820 1978774 . - . ID=gene1817;Name=YPC_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09110;old_locus_tag=YPC_2010 NC_017265.1 Protein Homology CDS 1975820 1978774 . - 0 ID=cds1761;Parent=gene1817;Dbxref=Genbank:WP_015683618.1;Name=WP_015683618.1;gbkey=CDS;product=toxin;protein_id=WP_015683618.1;transl_table=11 NC_017265.1 RefSeq gene 1979047 1979454 . + . ID=gene1818;Name=YPC_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09115;old_locus_tag=YPC_2011 NC_017265.1 Protein Homology CDS 1979047 1979454 . + 0 ID=cds1762;Parent=gene1818;Dbxref=Genbank:WP_002210948.1;Name=WP_002210948.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=lactoylglutathione lyase;protein_id=WP_002210948.1;transl_table=11 NC_017265.1 RefSeq gene 1979533 1980213 . + . ID=gene1819;Name=YPC_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09120;old_locus_tag=YPC_2012 NC_017265.1 Protein Homology CDS 1979533 1980213 . + 0 ID=cds1763;Parent=gene1819;Dbxref=Genbank:WP_002210947.1;Name=WP_002210947.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_002210947.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1980250 1980424 . + . ID=id172;gbkey=repeat_region NC_017265.1 RefSeq gene 1980522 1980872 . - . ID=gene1820;Name=YPC_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09125;old_locus_tag=YPC_2014 NC_017265.1 Protein Homology CDS 1980522 1980872 . - 0 ID=cds1764;Parent=gene1820;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NC_017265.1 RefSeq gene 1980972 1981193 . - . ID=gene1821;Name=YPC_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09130;old_locus_tag=YPC_2015 NC_017265.1 Protein Homology CDS 1980972 1981193 . - 0 ID=cds1765;Parent=gene1821;Dbxref=Genbank:WP_002216283.1;Name=WP_002216283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216283.1;transl_table=11 NC_017265.1 RefSeq gene 1981312 1982163 . + . ID=gene1822;Name=YPC_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09135;old_locus_tag=YPC_2016 NC_017265.1 Protein Homology CDS 1981312 1982163 . + 0 ID=cds1766;Parent=gene1822;Dbxref=Genbank:WP_002210945.1;Name=WP_002210945.1;gbkey=CDS;product=hydrolase;protein_id=WP_002210945.1;transl_table=11 NC_017265.1 RefSeq gene 1982541 1983119 . + . ID=gene1823;Name=YPC_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09140;old_locus_tag=YPC_2017 NC_017265.1 Protein Homology CDS 1982541 1983119 . + 0 ID=cds1767;Parent=gene1823;Dbxref=Genbank:WP_002210944.1;Name=WP_002210944.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002210944.1;transl_table=11 NC_017265.1 RefSeq gene 1983783 1984715 . - . ID=gene1824;Name=YPC_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09145;old_locus_tag=YPC_2018 NC_017265.1 Protein Homology CDS 1983783 1984715 . - 0 ID=cds1768;Parent=gene1824;Dbxref=Genbank:WP_002210942.1;Name=WP_002210942.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210942.1;transl_table=11 NC_017265.1 RefSeq gene 1985005 1986207 . + . ID=gene1825;Name=YPC_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09150;old_locus_tag=YPC_2019 NC_017265.1 Protein Homology CDS 1985005 1986207 . + 0 ID=cds1769;Parent=gene1825;Dbxref=Genbank:WP_002210941.1;Name=WP_002210941.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002210941.1;transl_table=11 NC_017265.1 RefSeq gene 1986687 1987838 . + . ID=gene1826;Name=YPC_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09155;old_locus_tag=YPC_2020 NC_017265.1 Protein Homology CDS 1986687 1987838 . + 0 ID=cds1770;Parent=gene1826;Dbxref=Genbank:WP_002210940.1;Name=WP_002210940.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11 NC_017265.1 RefSeq gene 1987889 1988545 . - . ID=gene1827;Name=YPC_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09160;old_locus_tag=YPC_2021 NC_017265.1 Protein Homology CDS 1987889 1988545 . - 0 ID=cds1771;Parent=gene1827;Dbxref=Genbank:WP_002210939.1;Name=WP_002210939.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_002210939.1;transl_table=11 NC_017265.1 RefSeq gene 1988794 1990167 . + . ID=gene1828;Name=YPC_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09165;old_locus_tag=YPC_2022 NC_017265.1 Protein Homology CDS 1988794 1990167 . + 0 ID=cds1772;Parent=gene1828;Dbxref=Genbank:WP_002210937.1;Name=WP_002210937.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_002210937.1;transl_table=11 NC_017265.1 RefSeq gene 1990410 1990486 . + . ID=gene1829;Name=YPC_RS09170;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS09170;old_locus_tag=YPC_2023 NC_017265.1 tRNAscan-SE tRNA 1990410 1990486 . + . ID=rna53;Parent=gene1829;anticodon=(pos:1990444..1990446);gbkey=tRNA;product=tRNA-Val NC_017265.1 tRNAscan-SE exon 1990410 1990486 . + . ID=id173;Parent=rna53;anticodon=(pos:1990444..1990446);gbkey=tRNA;product=tRNA-Val NC_017265.1 RefSeq gene 1990546 1990622 . + . ID=gene1830;Name=YPC_RS09175;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS09175;old_locus_tag=YPC_2024 NC_017265.1 tRNAscan-SE tRNA 1990546 1990622 . + . ID=rna54;Parent=gene1830;anticodon=(pos:1990580..1990582);gbkey=tRNA;product=tRNA-Val NC_017265.1 tRNAscan-SE exon 1990546 1990622 . + . ID=id174;Parent=rna54;anticodon=(pos:1990580..1990582);gbkey=tRNA;product=tRNA-Val NC_017265.1 RefSeq gene 1991198 1992610 . + . ID=gene1831;Name=YPC_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09180;old_locus_tag=YPC_2025 NC_017265.1 Protein Homology CDS 1991198 1992610 . + 0 ID=cds1773;Parent=gene1831;Dbxref=Genbank:WP_015683619.1;Name=WP_015683619.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_015683619.1;transl_table=11 NC_017265.1 RefSeq gene 1992931 1993167 . + . ID=gene1832;Name=YPC_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09185;old_locus_tag=YPC_2026 NC_017265.1 Protein Homology CDS 1992931 1993167 . + 0 ID=cds1774;Parent=gene1832;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11 NC_017265.1 RefSeq gene 1993198 1993368 . + . ID=gene1833;Name=YPC_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09190 NC_017265.1 Protein Homology CDS 1993198 1993368 . + 0 ID=cds1775;Parent=gene1833;Dbxref=Genbank:WP_002430115.1;Name=WP_002430115.1;gbkey=CDS;product=invasin;protein_id=WP_002430115.1;transl_table=11 NC_017265.1 RefSeq repeat_region 1993206 1995888 . + . ID=id175;gbkey=repeat_region NC_017265.1 RefSeq gene 1993358 1993789 . + . ID=gene1834;Name=YPC_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09195;old_locus_tag=YPC_2028 NC_017265.1 Protein Homology CDS 1993358 1993789 . + 0 ID=cds1776;Parent=gene1834;Dbxref=Genbank:WP_011566176.1;Name=WP_011566176.1;gbkey=CDS;product=transposase;protein_id=WP_011566176.1;transl_table=11 NC_017265.1 RefSeq gene 1993816 1994838 . + . ID=gene1835;Name=YPC_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09200;old_locus_tag=YPC_2029 NC_017265.1 Protein Homology CDS 1993816 1994838 . + 0 ID=cds1777;Parent=gene1835;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 1994838 1995617 . + . ID=gene1836;Name=YPC_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09205;old_locus_tag=YPC_2030 NC_017265.1 Protein Homology CDS 1994838 1995617 . + 0 ID=cds1778;Parent=gene1836;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 1996199 1997263 . - . ID=gene1837;Name=YPC_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09210;old_locus_tag=YPC_2032 NC_017265.1 Protein Homology CDS 1996199 1997263 . - 0 ID=cds1779;Parent=gene1837;Dbxref=Genbank:WP_002223648.1;Name=WP_002223648.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002223648.1;transl_table=11 NC_017265.1 RefSeq gene 1997534 1997956 . - . ID=gene1838;Name=YPC_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09215;old_locus_tag=YPC_2033 NC_017265.1 Protein Homology CDS 1997534 1997956 . - 0 ID=cds1780;Parent=gene1838;Dbxref=Genbank:WP_002211804.1;Name=WP_002211804.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NC_017265.1 RefSeq gene 1998045 1999265 . - . ID=gene1839;Name=YPC_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09220;old_locus_tag=YPC_2034 NC_017265.1 Protein Homology CDS 1998045 1999265 . - 0 ID=cds1781;Parent=gene1839;Dbxref=Genbank:WP_002211805.1;Name=WP_002211805.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002211805.1;transl_table=11 NC_017265.1 RefSeq gene 1999262 2000587 . - . ID=gene1840;Name=YPC_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09225;old_locus_tag=YPC_2035 NC_017265.1 Protein Homology CDS 1999262 2000587 . - 0 ID=cds1782;Parent=gene1840;Dbxref=Genbank:WP_002211806.1;Name=WP_002211806.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_002211806.1;transl_table=11 NC_017265.1 RefSeq gene 2000562 2001308 . - . ID=gene1841;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YPC_RS09230;old_locus_tag=YPC_2036 NC_017265.1 Protein Homology CDS 2000562 2001308 . - 0 ID=cds1783;Parent=gene1841;Dbxref=Genbank:WP_002211807.1;Name=WP_002211807.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002211807.1;transl_table=11 NC_017265.1 RefSeq gene 2001494 2003005 . - . ID=gene1842;Name=YPC_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09235;old_locus_tag=YPC_2037 NC_017265.1 Protein Homology CDS 2001494 2003005 . - 0 ID=cds1784;Parent=gene1842;Dbxref=Genbank:WP_002211808.1;Name=WP_002211808.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=Fe-S cluster assembly protein SufB;protein_id=WP_002211808.1;transl_table=11 NC_017265.1 RefSeq gene 2003020 2003391 . - . ID=gene1843;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YPC_RS09240;old_locus_tag=YPC_2038 NC_017265.1 Protein Homology CDS 2003020 2003391 . - 0 ID=cds1785;Parent=gene1843;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11 NC_017265.1 RefSeq gene 2003569 2003727 . - . ID=gene1844;Name=YPC_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09245 NC_017265.1 Protein Homology CDS 2003569 2003727 . - 0 ID=cds1786;Parent=gene1844;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11 NC_017265.1 RefSeq gene 2003986 2004402 . - . ID=gene1845;Name=YPC_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09250;old_locus_tag=YPC_2039 NC_017265.1 Protein Homology CDS 2003986 2004402 . - 0 ID=cds1787;Parent=gene1845;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11 NC_017265.1 RefSeq gene 2004524 2007580 . - . ID=gene1846;Name=YPC_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09255;old_locus_tag=YPC_2040 NC_017265.1 Protein Homology CDS 2004524 2007580 . - 0 ID=cds1788;Parent=gene1846;Dbxref=Genbank:WP_002211811.1;Name=WP_002211811.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211811.1;transl_table=11 NC_017265.1 RefSeq gene 2008201 2009304 . + . ID=gene1847;Name=YPC_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09260;old_locus_tag=YPC_2041 NC_017265.1 Protein Homology CDS 2008201 2009304 . + 0 ID=cds1789;Parent=gene1847;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11 NC_017265.1 RefSeq gene 2009903 2012287 . - . ID=gene1848;Name=YPC_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09265;old_locus_tag=YPC_2043 NC_017265.1 Protein Homology CDS 2009903 2012287 . - 0 ID=cds1790;Parent=gene1848;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NC_017265.1 RefSeq gene 2012624 2013445 . + . ID=gene1849;Name=YPC_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09270;old_locus_tag=YPC_2044 NC_017265.1 Protein Homology CDS 2012624 2013445 . + 0 ID=cds1791;Parent=gene1849;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11 NC_017265.1 RefSeq gene 2013602 2014648 . + . ID=gene1850;Name=YPC_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09275;old_locus_tag=YPC_2045 NC_017265.1 Protein Homology CDS 2013602 2014648 . + 0 ID=cds1792;Parent=gene1850;Dbxref=Genbank:WP_002211815.1;Name=WP_002211815.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002211815.1;transl_table=11 NC_017265.1 RefSeq gene 2014817 2016280 . - . ID=gene1851;Name=YPC_RS09280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS09280;pseudo=true NC_017265.1 Protein Homology CDS 2014817 2016280 . - 0 ID=cds1793;Parent=gene1851;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2015558..2015560)%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 2016332 2017348 . - . ID=gene1852;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YPC_RS09285;old_locus_tag=YPC_2048 NC_017265.1 Protein Homology CDS 2016332 2017348 . - 0 ID=cds1794;Parent=gene1852;Dbxref=Genbank:WP_002211816.1;Name=WP_002211816.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_002211816.1;transl_table=11 NC_017265.1 RefSeq gene 2017473 2017937 . - . ID=gene1853;Name=YPC_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09290;old_locus_tag=YPC_2049 NC_017265.1 Protein Homology CDS 2017473 2017937 . - 0 ID=cds1795;Parent=gene1853;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11 NC_017265.1 RefSeq gene 2018217 2018531 . - . ID=gene1854;Name=YPC_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09295;old_locus_tag=YPC_2051 NC_017265.1 Protein Homology CDS 2018217 2018531 . - 0 ID=cds1796;Parent=gene1854;Dbxref=Genbank:WP_042468806.1;Name=WP_042468806.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;protein_id=WP_042468806.1;transl_table=11 NC_017265.1 RefSeq gene 2018599 2018943 . - . ID=gene1855;Name=YPC_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09300;old_locus_tag=YPC_2052 NC_017265.1 Protein Homology CDS 2018599 2018943 . - 0 ID=cds1797;Parent=gene1855;Dbxref=Genbank:WP_002211820.1;Name=WP_002211820.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002211820.1;transl_table=11 NC_017265.1 RefSeq gene 2018940 2020604 . - . ID=gene1856;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YPC_RS09305;old_locus_tag=YPC_2053 NC_017265.1 Protein Homology CDS 2018940 2020604 . - 0 ID=cds1798;Parent=gene1856;Dbxref=Genbank:WP_002211821.1;Name=WP_002211821.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_002211821.1;transl_table=11 NC_017265.1 RefSeq gene 2020601 2021506 . - . ID=gene1857;Name=YPC_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09310;old_locus_tag=YPC_2054 NC_017265.1 Protein Homology CDS 2020601 2021506 . - 0 ID=cds1799;Parent=gene1857;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11 NC_017265.1 RefSeq gene 2021503 2023506 . - . ID=gene1858;Name=YPC_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09315;old_locus_tag=YPC_2055 NC_017265.1 Protein Homology CDS 2021503 2023506 . - 0 ID=cds1800;Parent=gene1858;Dbxref=Genbank:WP_002211823.1;Name=WP_002211823.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_002211823.1;transl_table=11 NC_017265.1 RefSeq gene 2023503 2024486 . - . ID=gene1859;Name=YPC_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09320;old_locus_tag=YPC_2056 NC_017265.1 Protein Homology CDS 2023503 2024486 . - 0 ID=cds1801;Parent=gene1859;Dbxref=Genbank:WP_002211824.1;Name=WP_002211824.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002211824.1;transl_table=11 NC_017265.1 RefSeq gene 2024473 2025627 . - . ID=gene1860;Name=YPC_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09325;old_locus_tag=YPC_2057 NC_017265.1 Protein Homology CDS 2024473 2025627 . - 0 ID=cds1802;Parent=gene1860;Dbxref=Genbank:WP_002211825.1;Name=WP_002211825.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_002211825.1;transl_table=11 NC_017265.1 RefSeq gene 2025977 2026735 . - . ID=gene1861;Name=YPC_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09330;old_locus_tag=YPC_2058 NC_017265.1 Protein Homology CDS 2025977 2026735 . - 0 ID=cds1803;Parent=gene1861;Dbxref=Genbank:WP_002211826.1;Name=WP_002211826.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_002211826.1;transl_table=11 NC_017265.1 RefSeq gene 2026760 2027314 . - . ID=gene1862;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YPC_RS09335;old_locus_tag=YPC_2059 NC_017265.1 Protein Homology CDS 2026760 2027314 . - 0 ID=cds1804;Parent=gene1862;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NC_017265.1 RefSeq gene 2027384 2028391 . - . ID=gene1863;Name=YPC_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09340;old_locus_tag=YPC_2060 NC_017265.1 Protein Homology CDS 2027384 2028391 . - 0 ID=cds1805;Parent=gene1863;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11 NC_017265.1 RefSeq gene 2028618 2029076 . - . ID=gene1864;Name=YPC_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09345;old_locus_tag=YPC_2061 NC_017265.1 Protein Homology CDS 2028618 2029076 . - 0 ID=cds1806;Parent=gene1864;Dbxref=Genbank:WP_002211829.1;Name=WP_002211829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211829.1;transl_table=11 NC_017265.1 RefSeq gene 2029410 2029706 . - . ID=gene1865;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YPC_RS09350;old_locus_tag=YPC_2062 NC_017265.1 Protein Homology CDS 2029410 2029706 . - 0 ID=cds1807;Parent=gene1865;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NC_017265.1 RefSeq gene 2029711 2032098 . - . ID=gene1866;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YPC_RS09355;old_locus_tag=YPC_2063 NC_017265.1 Protein Homology CDS 2029711 2032098 . - 0 ID=cds1808;Parent=gene1866;Dbxref=Genbank:WP_002211831.1;Name=WP_002211831.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002211831.1;transl_table=11 NC_017265.1 RefSeq gene 2032112 2033095 . - . ID=gene1867;Name=YPC_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09360;old_locus_tag=YPC_2064 NC_017265.1 Protein Homology CDS 2032112 2033095 . - 0 ID=cds1809;Parent=gene1867;Dbxref=Genbank:WP_002211832.1;Name=WP_002211832.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002211832.1;transl_table=11 NC_017265.1 RefSeq gene 2033594 2033950 . - . ID=gene1868;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YPC_RS09365;old_locus_tag=YPC_2067 NC_017265.1 Protein Homology CDS 2033594 2033950 . - 0 ID=cds1810;Parent=gene1868;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NC_017265.1 RefSeq gene 2033988 2034185 . - . ID=gene1869;Name=YPC_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09370;old_locus_tag=YPC_2068 NC_017265.1 Protein Homology CDS 2033988 2034185 . - 0 ID=cds1811;Parent=gene1869;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NC_017265.1 RefSeq gene 2034282 2034632 . - . ID=gene1870;Name=YPC_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09375;old_locus_tag=YPC_2069 NC_017265.1 Protein Homology CDS 2034282 2034632 . - 0 ID=cds1812;Parent=gene1870;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11 NC_017265.1 RefSeq gene 2034837 2036765 . - . ID=gene1871;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YPC_RS09380;old_locus_tag=YPC_2070 NC_017265.1 Protein Homology CDS 2034837 2036765 . - 0 ID=cds1813;Parent=gene1871;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NC_017265.1 RefSeq gene 2037156 2037368 . + . ID=gene1872;Name=YPC_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09385;old_locus_tag=YPC_2073 NC_017265.1 Protein Homology CDS 2037156 2037368 . + 0 ID=cds1814;Parent=gene1872;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11 NC_017265.1 RefSeq gene 2037678 2038055 . + . ID=gene1873;Name=YPC_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09390;old_locus_tag=YPC_2075 NC_017265.1 Protein Homology CDS 2037678 2038055 . + 0 ID=cds1815;Parent=gene1873;Dbxref=Genbank:WP_015683621.1;Name=WP_015683621.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683621.1;transl_table=11 NC_017265.1 RefSeq gene 2038127 2038378 . - . ID=gene1874;Name=YPC_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09395;old_locus_tag=YPC_2076 NC_017265.1 Protein Homology CDS 2038127 2038378 . - 0 ID=cds1816;Parent=gene1874;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NC_017265.1 RefSeq gene 2038697 2039380 . + . ID=gene1875;Name=YPC_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09400;old_locus_tag=YPC_2078 NC_017265.1 Protein Homology CDS 2038697 2039380 . + 0 ID=cds1817;Parent=gene1875;Dbxref=Genbank:WP_002211840.1;Name=WP_002211840.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211840.1;transl_table=11 NC_017265.1 RefSeq gene 2039502 2040164 . - . ID=gene1876;Name=YPC_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09405;old_locus_tag=YPC_2079 NC_017265.1 Protein Homology CDS 2039502 2040164 . - 0 ID=cds1818;Parent=gene1876;Dbxref=Genbank:WP_002216686.1;Name=WP_002216686.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_002216686.1;transl_table=11 NC_017265.1 RefSeq gene 2040376 2041344 . + . ID=gene1877;Name=YPC_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09410;old_locus_tag=YPC_2080 NC_017265.1 Protein Homology CDS 2040376 2041344 . + 0 ID=cds1819;Parent=gene1877;Dbxref=Genbank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_002211842.1;transl_table=11 NC_017265.1 RefSeq gene 2041341 2042231 . + . ID=gene1878;Name=YPC_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09415;old_locus_tag=YPC_2081 NC_017265.1 Protein Homology CDS 2041341 2042231 . + 0 ID=cds1820;Parent=gene1878;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11 NC_017265.1 RefSeq gene 2042231 2043115 . + . ID=gene1879;Name=YPC_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09420 NC_017265.1 Protein Homology CDS 2042231 2043115 . + 0 ID=cds1821;Parent=gene1879;Dbxref=Genbank:WP_002211844.1;Name=WP_002211844.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeC;protein_id=WP_002211844.1;transl_table=11 NC_017265.1 RefSeq gene 2043112 2044005 . + . ID=gene1880;Name=YPC_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09425 NC_017265.1 Protein Homology CDS 2043112 2044005 . + 0 ID=cds1822;Parent=gene1880;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11 NC_017265.1 RefSeq gene 2044073 2044285 . + . ID=gene1881;Name=YPC_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09430;old_locus_tag=YPC_2084 NC_017265.1 Protein Homology CDS 2044073 2044285 . + 0 ID=cds1823;Parent=gene1881;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11 NC_017265.1 RefSeq gene 2044310 2045185 . + . ID=gene1882;Name=YPC_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09435;old_locus_tag=YPC_2085 NC_017265.1 Protein Homology CDS 2044310 2045185 . + 0 ID=cds1824;Parent=gene1882;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11 NC_017265.1 RefSeq gene 2045314 2045868 . - . ID=gene1883;Name=YPC_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09440;old_locus_tag=YPC_2086 NC_017265.1 Protein Homology CDS 2045314 2045868 . - 0 ID=cds1825;Parent=gene1883;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11 NC_017265.1 RefSeq gene 2046279 2046944 . + . ID=gene1884;Name=YPC_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09445;old_locus_tag=YPC_2087 NC_017265.1 Protein Homology CDS 2046279 2046944 . + 0 ID=cds1826;Parent=gene1884;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2047158 2048478 . + . ID=id176;gbkey=repeat_region NC_017265.1 RefSeq gene 2047195 2048403 . - . ID=gene1885;Name=YPC_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09450;old_locus_tag=YPC_2089 NC_017265.1 Protein Homology CDS 2047195 2048403 . - 0 ID=cds1827;Parent=gene1885;Dbxref=Genbank:WP_015683622.1;Name=WP_015683622.1;gbkey=CDS;product=transposase;protein_id=WP_015683622.1;transl_table=11 NC_017265.1 RefSeq gene 2048451 2048801 . - . ID=gene1886;Name=YPC_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09455;old_locus_tag=YPC_2090 NC_017265.1 Protein Homology CDS 2048451 2048801 . - 0 ID=cds1828;Parent=gene1886;Dbxref=Genbank:WP_002210828.1;Name=WP_002210828.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_002210828.1;transl_table=11 NC_017265.1 RefSeq gene 2049137 2049973 . + . ID=gene1887;Name=YPC_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09460;old_locus_tag=YPC_2091 NC_017265.1 Protein Homology CDS 2049137 2049973 . + 0 ID=cds1829;Parent=gene1887;Dbxref=Genbank:WP_002210829.1;Name=WP_002210829.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_002210829.1;transl_table=11 NC_017265.1 RefSeq gene 2050065 2050826 . + . ID=gene1888;Name=YPC_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09465;old_locus_tag=YPC_2092 NC_017265.1 Protein Homology CDS 2050065 2050826 . + 0 ID=cds1830;Parent=gene1888;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11 NC_017265.1 RefSeq gene 2051162 2052829 . + . ID=gene1889;Name=YPC_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09470;old_locus_tag=YPC_2093 NC_017265.1 Protein Homology CDS 2051162 2052829 . + 0 ID=cds1831;Parent=gene1889;Dbxref=Genbank:WP_002210831.1;Name=WP_002210831.1;gbkey=CDS;product=pectate disaccharide-lyase;protein_id=WP_002210831.1;transl_table=11 NC_017265.1 RefSeq gene 2052870 2053760 . + . ID=gene1890;Name=YPC_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09475 NC_017265.1 Protein Homology CDS 2052870 2053760 . + 0 ID=cds1832;Parent=gene1890;Dbxref=Genbank:WP_002210832.1;Name=WP_002210832.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NC_017265.1 RefSeq gene 2053753 2054673 . + . ID=gene1891;Name=YPC_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09480 NC_017265.1 Protein Homology CDS 2053753 2054673 . + 0 ID=cds1833;Parent=gene1891;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NC_017265.1 RefSeq gene 2054687 2055814 . + . ID=gene1892;Name=YPC_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09485;old_locus_tag=YPC_2096 NC_017265.1 Protein Homology CDS 2054687 2055814 . + 0 ID=cds1834;Parent=gene1892;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NC_017265.1 RefSeq gene 2055830 2057122 . + . ID=gene1893;Name=YPC_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09490;old_locus_tag=YPC_2097 NC_017265.1 Protein Homology CDS 2055830 2057122 . + 0 ID=cds1835;Parent=gene1893;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NC_017265.1 RefSeq gene 2057420 2058130 . + . ID=gene1894;Name=YPC_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09495;old_locus_tag=YPC_2098 NC_017265.1 Protein Homology CDS 2057420 2058130 . + 0 ID=cds1836;Parent=gene1894;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11 NC_017265.1 RefSeq gene 2058610 2059158 . + . ID=gene1895;Name=YPC_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09500;old_locus_tag=YPC_2099 NC_017265.1 Protein Homology CDS 2058610 2059158 . + 0 ID=cds1837;Parent=gene1895;Dbxref=Genbank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210837.1;transl_table=11 NC_017265.1 RefSeq gene 2059362 2060753 . + . ID=gene1896;Name=YPC_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09505;old_locus_tag=YPC_2100 NC_017265.1 Protein Homology CDS 2059362 2060753 . + 0 ID=cds1838;Parent=gene1896;Dbxref=Genbank:WP_002210838.1;Name=WP_002210838.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_002210838.1;transl_table=11 NC_017265.1 RefSeq gene 2060968 2061819 . - . ID=gene1897;Name=YPC_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09510;old_locus_tag=YPC_2102 NC_017265.1 Protein Homology CDS 2060968 2061819 . - 0 ID=cds1839;Parent=gene1897;Dbxref=Genbank:WP_002210839.1;Name=WP_002210839.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11 NC_017265.1 RefSeq gene 2062204 2062995 . - . ID=gene1898;Name=YPC_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09515;old_locus_tag=YPC_2103 NC_017265.1 Protein Homology CDS 2062204 2062995 . - 0 ID=cds1840;Parent=gene1898;Dbxref=Genbank:WP_015683623.1;Name=WP_015683623.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_015683623.1;transl_table=11 NC_017265.1 RefSeq gene 2063182 2064348 . - . ID=gene1899;Name=YPC_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09520;old_locus_tag=YPC_2104 NC_017265.1 Protein Homology CDS 2063182 2064348 . - 0 ID=cds1841;Parent=gene1899;Dbxref=Genbank:WP_002210841.1;Name=WP_002210841.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_002210841.1;transl_table=11 NC_017265.1 RefSeq gene 2064675 2066042 . + . ID=gene1900;Name=YPC_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09525;old_locus_tag=YPC_2105 NC_017265.1 Protein Homology CDS 2064675 2066042 . + 0 ID=cds1842;Parent=gene1900;Dbxref=Genbank:WP_015683624.1;Name=WP_015683624.1;gbkey=CDS;product=multidrug MFS transporter;protein_id=WP_015683624.1;transl_table=11 NC_017265.1 RefSeq gene 2066096 2066899 . - . ID=gene1901;Name=YPC_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09530;old_locus_tag=YPC_2106 NC_017265.1 Protein Homology CDS 2066096 2066899 . - 0 ID=cds1843;Parent=gene1901;Dbxref=Genbank:WP_002210843.1;Name=WP_002210843.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210843.1;transl_table=11 NC_017265.1 RefSeq gene 2066896 2068059 . - . ID=gene1902;Name=YPC_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09535;old_locus_tag=YPC_2107 NC_017265.1 Protein Homology CDS 2066896 2068059 . - 0 ID=cds1844;Parent=gene1902;Dbxref=Genbank:WP_002215120.1;Name=WP_002215120.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11 NC_017265.1 RefSeq gene 2068056 2070668 . - . ID=gene1903;Name=YPC_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09540;old_locus_tag=YPC_2108 NC_017265.1 Protein Homology CDS 2068056 2070668 . - 0 ID=cds1845;Parent=gene1903;Dbxref=Genbank:WP_002210844.1;Name=WP_002210844.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210844.1;transl_table=11 NC_017265.1 RefSeq gene 2070750 2071436 . - . ID=gene1904;Name=YPC_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09545;old_locus_tag=YPC_2109 NC_017265.1 Protein Homology CDS 2070750 2071436 . - 0 ID=cds1846;Parent=gene1904;Dbxref=Genbank:WP_002354110.1;Name=WP_002354110.1;gbkey=CDS;product=fimbrial assembly protein StbE;protein_id=WP_002354110.1;transl_table=11 NC_017265.1 RefSeq gene 2071682 2072224 . - . ID=gene1905;Name=YPC_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09550;old_locus_tag=YPC_2110 NC_017265.1 Protein Homology CDS 2071682 2072224 . - 0 ID=cds1847;Parent=gene1905;Dbxref=Genbank:WP_002210846.1;Name=WP_002210846.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002210846.1;transl_table=11 NC_017265.1 RefSeq gene 2072882 2073763 . - . ID=gene1906;Name=YPC_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09555;old_locus_tag=YPC_2111 NC_017265.1 Protein Homology CDS 2072882 2073763 . - 0 ID=cds1848;Parent=gene1906;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NC_017265.1 RefSeq gene 2074237 2076309 . - . ID=gene1907;Name=YPC_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09560;old_locus_tag=YPC_2112 NC_017265.1 Protein Homology CDS 2074237 2076309 . - 0 ID=cds1849;Parent=gene1907;Dbxref=Genbank:WP_002210848.1;Name=WP_002210848.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_002210848.1;transl_table=11 NC_017265.1 RefSeq gene 2076329 2077042 . - . ID=gene1908;Name=YPC_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09565;old_locus_tag=YPC_2113 NC_017265.1 Protein Homology CDS 2076329 2077042 . - 0 ID=cds1850;Parent=gene1908;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NC_017265.1 RefSeq gene 2077138 2077635 . - . ID=gene1909;Name=YPC_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09570;old_locus_tag=YPC_2115 NC_017265.1 Protein Homology CDS 2077138 2077635 . - 0 ID=cds1851;Parent=gene1909;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11 NC_017265.1 RefSeq gene 2077867 2079114 . + . ID=gene1910;Name=YPC_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09575;old_locus_tag=YPC_2116 NC_017265.1 Protein Homology CDS 2077867 2079114 . + 0 ID=cds1852;Parent=gene1910;Dbxref=Genbank:WP_002367629.1;Name=WP_002367629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002367629.1;transl_table=11 NC_017265.1 RefSeq gene 2079083 2081733 . + . ID=gene1911;Name=YPC_RS09580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS09580;pseudo=true NC_017265.1 Protein Homology CDS 2079083 2081733 . + 0 ID=cds1853;Parent=gene1911;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2082212 2082766 . + . ID=gene1912;Name=YPC_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09585;old_locus_tag=YPC_2119 NC_017265.1 Protein Homology CDS 2082212 2082766 . + 0 ID=cds1854;Parent=gene1912;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11 NC_017265.1 RefSeq gene 2082811 2083302 . + . ID=gene1913;Name=YPC_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09590;old_locus_tag=YPC_2120 NC_017265.1 Protein Homology CDS 2082811 2083302 . + 0 ID=cds1855;Parent=gene1913;Dbxref=Genbank:WP_002210853.1;Name=WP_002210853.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210853.1;transl_table=11 NC_017265.1 RefSeq gene 2083323 2083880 . + . ID=gene1914;Name=YPC_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09595;old_locus_tag=YPC_2121 NC_017265.1 Protein Homology CDS 2083323 2083880 . + 0 ID=cds1856;Parent=gene1914;Dbxref=Genbank:WP_002216611.1;Name=WP_002216611.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002216611.1;transl_table=11 NC_017265.1 RefSeq gene 2083911 2084663 . + . ID=gene1915;Name=YPC_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09600;old_locus_tag=YPC_2122 NC_017265.1 Protein Homology CDS 2083911 2084663 . + 0 ID=cds1857;Parent=gene1915;Dbxref=Genbank:WP_002210856.1;Name=WP_002210856.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210856.1;transl_table=11 NC_017265.1 RefSeq gene 2084834 2087281 . + . ID=gene1916;Name=YPC_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09605;old_locus_tag=YPC_2123 NC_017265.1 Protein Homology CDS 2084834 2087281 . + 0 ID=cds1858;Parent=gene1916;Dbxref=Genbank:WP_002210857.1;Name=WP_002210857.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210857.1;transl_table=11 NC_017265.1 RefSeq gene 2087487 2088476 . + . ID=gene1917;Name=YPC_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09610;old_locus_tag=YPC_2125 NC_017265.1 Protein Homology CDS 2087487 2088476 . + 0 ID=cds1859;Parent=gene1917;Dbxref=Genbank:WP_002210858.1;Name=WP_002210858.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210858.1;transl_table=11 NC_017265.1 RefSeq gene 2088684 2088923 . + . ID=gene1918;Name=YPC_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09615;old_locus_tag=YPC_2126 NC_017265.1 Protein Homology CDS 2088684 2088923 . + 0 ID=cds1860;Parent=gene1918;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11 NC_017265.1 RefSeq gene 2089033 2089422 . - . ID=gene1919;Name=YPC_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09620;old_locus_tag=YPC_2127 NC_017265.1 Protein Homology CDS 2089033 2089422 . - 0 ID=cds1861;Parent=gene1919;Dbxref=Genbank:WP_002215943.1;Name=WP_002215943.1;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002215943.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2089741 2091699 . + . ID=id177;gbkey=repeat_region NC_017265.1 RefSeq gene 2089829 2090851 . + . ID=gene1920;Name=YPC_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09625;old_locus_tag=YPC_2129 NC_017265.1 Protein Homology CDS 2089829 2090851 . + 0 ID=cds1862;Parent=gene1920;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 2090851 2091630 . + . ID=gene1921;Name=YPC_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09630;old_locus_tag=YPC_2130 NC_017265.1 Protein Homology CDS 2090851 2091630 . + 0 ID=cds1863;Parent=gene1921;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 2091999 2092589 . - . ID=gene1922;Name=YPC_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09635;old_locus_tag=YPC_2131 NC_017265.1 Protein Homology CDS 2091999 2092589 . - 0 ID=cds1864;Parent=gene1922;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NC_017265.1 RefSeq gene 2093339 2093746 . + . ID=gene1923;Name=YPC_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09640;old_locus_tag=YPC_2133 NC_017265.1 Protein Homology CDS 2093339 2093746 . + 0 ID=cds1865;Parent=gene1923;Dbxref=Genbank:WP_002223593.1;Name=WP_002223593.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002223593.1;transl_table=11 NC_017265.1 RefSeq gene 2094181 2095528 . - . ID=gene1924;Name=YPC_RS09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS09645;pseudo=true NC_017265.1 Protein Homology CDS 2094181 2095528 . - 0 ID=cds1866;Parent=gene1924;exception=annotated by transcript or proteomic data;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2095835 2096851 . - . ID=gene1925;Name=YPC_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09650;old_locus_tag=YPC_2136 NC_017265.1 Protein Homology CDS 2095835 2096851 . - 0 ID=cds1867;Parent=gene1925;Dbxref=Genbank:WP_002210665.1;Name=WP_002210665.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210665.1;transl_table=11 NC_017265.1 RefSeq gene 2098185 2098649 . + . ID=gene1926;Name=YPC_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09655;old_locus_tag=YPC_2137 NC_017265.1 Protein Homology CDS 2098185 2098649 . + 0 ID=cds1868;Parent=gene1926;Dbxref=Genbank:WP_002210666.1;Name=WP_002210666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210666.1;transl_table=11 NC_017265.1 RefSeq gene 2098733 2099602 . + . ID=gene1927;Name=YPC_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09660;old_locus_tag=YPC_2138 NC_017265.1 Protein Homology CDS 2098733 2099602 . + 0 ID=cds1869;Parent=gene1927;Dbxref=Genbank:WP_002210667.1;Name=WP_002210667.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_002210667.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2099527 2100846 . + . ID=id178;gbkey=repeat_region NC_017265.1 RefSeq gene 2099565 2100773 . - . ID=gene1928;Name=YPC_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09665;old_locus_tag=YPC_2139 NC_017265.1 Protein Homology CDS 2099565 2100773 . - 0 ID=cds1870;Parent=gene1928;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2101053 2101137 . + . ID=gene1929;Name=YPC_RS09670;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS09670;old_locus_tag=YPC_2140 NC_017265.1 tRNAscan-SE tRNA 2101053 2101137 . + . ID=rna55;Parent=gene1929;anticodon=(pos:2101087..2101089);gbkey=tRNA;product=tRNA-Tyr NC_017265.1 tRNAscan-SE exon 2101053 2101137 . + . ID=id179;Parent=rna55;anticodon=(pos:2101087..2101089);gbkey=tRNA;product=tRNA-Tyr NC_017265.1 RefSeq repeat_region 2101119 2101583 . + . ID=id180;gbkey=repeat_region NC_017265.1 RefSeq gene 2101645 2102505 . - . ID=gene1930;Name=YPC_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09675;old_locus_tag=YPC_2141 NC_017265.1 Protein Homology CDS 2101645 2102505 . - 0 ID=cds1871;Parent=gene1930;Dbxref=Genbank:WP_002211665.1;Name=WP_002211665.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211665.1;transl_table=11 NC_017265.1 RefSeq gene 2103315 2104121 . + . ID=gene1931;Name=YPC_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09680;old_locus_tag=YPC_2143 NC_017265.1 Protein Homology CDS 2103315 2104121 . + 0 ID=cds1872;Parent=gene1931;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11 NC_017265.1 RefSeq gene 2104219 2104605 . + . ID=gene1932;Name=YPC_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09685;old_locus_tag=YPC_2144 NC_017265.1 Protein Homology CDS 2104219 2104605 . + 0 ID=cds1873;Parent=gene1932;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11 NC_017265.1 RefSeq gene 2104618 2104908 . - . ID=gene1933;Name=YPC_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09690;old_locus_tag=YPC_2145 NC_017265.1 Protein Homology CDS 2104618 2104908 . - 0 ID=cds1874;Parent=gene1933;Dbxref=Genbank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211669.1;transl_table=11 NC_017265.1 RefSeq gene 2104905 2106830 . - . ID=gene1934;Name=YPC_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09695;old_locus_tag=YPC_2147 NC_017265.1 Protein Homology CDS 2104905 2106830 . - 0 ID=cds1875;Parent=gene1934;Dbxref=Genbank:WP_002211670.1;Name=WP_002211670.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_002211670.1;transl_table=11 NC_017265.1 RefSeq gene 2106892 2107938 . - . ID=gene1935;Name=YPC_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09700;old_locus_tag=YPC_2148 NC_017265.1 Protein Homology CDS 2106892 2107938 . - 0 ID=cds1876;Parent=gene1935;Dbxref=Genbank:WP_015683625.1;Name=WP_015683625.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_015683625.1;transl_table=11 NC_017265.1 RefSeq gene 2108163 2108714 . - . ID=gene1936;Name=YPC_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09705;old_locus_tag=YPC_2150 NC_017265.1 Protein Homology CDS 2108163 2108714 . - 0 ID=cds1877;Parent=gene1936;Dbxref=Genbank:WP_002211673.1;Name=WP_002211673.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211673.1;transl_table=11 NC_017265.1 RefSeq gene 2108877 2110726 . + . ID=gene1937;Name=YPC_RS09710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS09710;pseudo=true NC_017265.1 Protein Homology CDS 2108877 2110726 . + 0 ID=cds1878;Parent=gene1937;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protease 4;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2110843 2111859 . + . ID=gene1938;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YPC_RS09715;old_locus_tag=YPC_2153 NC_017265.1 Protein Homology CDS 2110843 2111859 . + 0 ID=cds1879;Parent=gene1938;Dbxref=Genbank:WP_002211675.1;Name=WP_002211675.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_002211675.1;transl_table=11 NC_017265.1 RefSeq gene 2111874 2112521 . + . ID=gene1939;Name=YPC_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09720;old_locus_tag=YPC_2154 NC_017265.1 Protein Homology CDS 2111874 2112521 . + 0 ID=cds1880;Parent=gene1939;Dbxref=Genbank:WP_002211676.1;Name=WP_002211676.1;gbkey=CDS;product=nicotinamidase/pyrazinamidase;protein_id=WP_002211676.1;transl_table=11 NC_017265.1 RefSeq gene 2112655 2112927 . - . ID=gene1940;Name=YPC_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09725;old_locus_tag=YPC_2155 NC_017265.1 Protein Homology CDS 2112655 2112927 . - 0 ID=cds1881;Parent=gene1940;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11 NC_017265.1 RefSeq gene 2112998 2113411 . - . ID=gene1941;Name=YPC_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09730;old_locus_tag=YPC_2156 NC_017265.1 Protein Homology CDS 2112998 2113411 . - 0 ID=cds1882;Parent=gene1941;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NC_017265.1 RefSeq gene 2113759 2114754 . + . ID=gene1942;Name=YPC_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09735;old_locus_tag=YPC_2157 NC_017265.1 Protein Homology CDS 2113759 2114754 . + 0 ID=cds1883;Parent=gene1942;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NC_017265.1 RefSeq gene 2115068 2115943 . + . ID=gene1943;Name=YPC_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09740;old_locus_tag=YPC_2158 NC_017265.1 Protein Homology CDS 2115068 2115943 . + 0 ID=cds1884;Parent=gene1943;Dbxref=Genbank:WP_002211679.1;Name=WP_002211679.1;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;protein_id=WP_002211679.1;transl_table=11 NC_017265.1 RefSeq gene 2116016 2116786 . - . ID=gene1944;Name=YPC_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09745;old_locus_tag=YPC_2159 NC_017265.1 Protein Homology CDS 2116016 2116786 . - 0 ID=cds1885;Parent=gene1944;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11 NC_017265.1 RefSeq gene 2117209 2119143 . + . ID=gene1945;Name=YPC_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09750;old_locus_tag=YPC_2160 NC_017265.1 Protein Homology CDS 2117209 2119143 . + 0 ID=cds1886;Parent=gene1945;Dbxref=Genbank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_002211681.1;transl_table=11 NC_017265.1 RefSeq gene 2119293 2120567 . + . ID=gene1946;Name=YPC_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09755;old_locus_tag=YPC_2161 NC_017265.1 Protein Homology CDS 2119293 2120567 . + 0 ID=cds1887;Parent=gene1946;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11 NC_017265.1 RefSeq gene 2120675 2121793 . + . ID=gene1947;Name=YPC_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09760;old_locus_tag=YPC_2162 NC_017265.1 Protein Homology CDS 2120675 2121793 . + 0 ID=cds1888;Parent=gene1947;Dbxref=Genbank:WP_002211683.1;Name=WP_002211683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211683.1;transl_table=11 NC_017265.1 RefSeq gene 2121828 2122733 . - . ID=gene1948;Name=YPC_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09765;old_locus_tag=YPC_2163 NC_017265.1 Protein Homology CDS 2121828 2122733 . - 0 ID=cds1889;Parent=gene1948;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NC_017265.1 RefSeq gene 2122931 2123800 . + . ID=gene1949;Name=YPC_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09770;old_locus_tag=YPC_2164 NC_017265.1 Protein Homology CDS 2122931 2123800 . + 0 ID=cds1890;Parent=gene1949;Dbxref=Genbank:WP_002211685.1;Name=WP_002211685.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002211685.1;transl_table=11 NC_017265.1 RefSeq gene 2124065 2125267 . + . ID=gene1950;Name=YPC_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09775;old_locus_tag=YPC_2166 NC_017265.1 Protein Homology CDS 2124065 2125267 . + 0 ID=cds1891;Parent=gene1950;Dbxref=Genbank:WP_002216508.1;Name=WP_002216508.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002216508.1;transl_table=11 NC_017265.1 RefSeq gene 2125283 2126587 . - . ID=gene1951;Name=YPC_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09780;old_locus_tag=YPC_2167 NC_017265.1 Protein Homology CDS 2125283 2126587 . - 0 ID=cds1892;Parent=gene1951;Dbxref=Genbank:WP_002211686.1;Name=WP_002211686.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NC_017265.1 RefSeq gene 2127053 2128588 . + . ID=gene1952;Name=YPC_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09785;old_locus_tag=YPC_2168 NC_017265.1 Protein Homology CDS 2127053 2128588 . + 0 ID=cds1893;Parent=gene1952;Dbxref=Genbank:WP_002211687.1;Name=WP_002211687.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_002211687.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2128636 2128767 . + . ID=id181;gbkey=repeat_region NC_017265.1 RefSeq gene 2128806 2129525 . - . ID=gene1953;Name=YPC_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09790;old_locus_tag=YPC_2169 NC_017265.1 Protein Homology CDS 2128806 2129525 . - 0 ID=cds1894;Parent=gene1953;Dbxref=Genbank:WP_002211688.1;Name=WP_002211688.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_002211688.1;transl_table=11 NC_017265.1 RefSeq gene 2129769 2131343 . + . ID=gene1954;Name=YPC_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09795;old_locus_tag=YPC_2170 NC_017265.1 Protein Homology CDS 2129769 2131343 . + 0 ID=cds1895;Parent=gene1954;Dbxref=Genbank:WP_002211689.1;Name=WP_002211689.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_002211689.1;transl_table=11 NC_017265.1 RefSeq gene 2131579 2132109 . + . ID=gene1955;Name=YPC_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09800;old_locus_tag=YPC_2171 NC_017265.1 Protein Homology CDS 2131579 2132109 . + 0 ID=cds1896;Parent=gene1955;Dbxref=Genbank:WP_002227934.1;Name=WP_002227934.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_002227934.1;transl_table=11 NC_017265.1 RefSeq gene 2132526 2132882 . - . ID=gene1956;Name=YPC_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09805;old_locus_tag=YPC_2172 NC_017265.1 Protein Homology CDS 2132526 2132882 . - 0 ID=cds1897;Parent=gene1956;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NC_017265.1 RefSeq gene 2133974 2134714 . + . ID=gene1957;Name=YPC_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09810;old_locus_tag=YPC_2173 NC_017265.1 Protein Homology CDS 2133974 2134714 . + 0 ID=cds1898;Parent=gene1957;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NC_017265.1 RefSeq gene 2134731 2135930 . + . ID=gene1958;Name=YPC_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09815;old_locus_tag=YPC_2174 NC_017265.1 Protein Homology CDS 2134731 2135930 . + 0 ID=cds1899;Parent=gene1958;Dbxref=Genbank:WP_002211693.1;Name=WP_002211693.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=aminotransferase;protein_id=WP_002211693.1;transl_table=11 NC_017265.1 RefSeq gene 2135934 2137106 . + . ID=gene1959;Name=YPC_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09820;old_locus_tag=YPC_2175 NC_017265.1 Protein Homology CDS 2135934 2137106 . + 0 ID=cds1900;Parent=gene1959;Dbxref=Genbank:WP_002214492.1;Name=WP_002214492.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2137336 2138657 . + . ID=id182;gbkey=repeat_region NC_017265.1 RefSeq gene 2137411 2138619 . + . ID=gene1960;Name=YPC_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09825;old_locus_tag=YPC_2176 NC_017265.1 Protein Homology CDS 2137411 2138619 . + 0 ID=cds1901;Parent=gene1960;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2138688 2138843 . - . ID=gene1961;Name=YPC_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09830;old_locus_tag=YPC_2177 NC_017265.1 Protein Homology CDS 2138688 2138843 . - 0 ID=cds1902;Parent=gene1961;Dbxref=Genbank:WP_002211694.1;Name=WP_002211694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211694.1;transl_table=11 NC_017265.1 RefSeq gene 2138840 2139259 . - . ID=gene1962;Name=YPC_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09835;old_locus_tag=YPC_2178 NC_017265.1 Protein Homology CDS 2138840 2139259 . - 0 ID=cds1903;Parent=gene1962;Dbxref=Genbank:WP_002211695.1;Name=WP_002211695.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211695.1;transl_table=11 NC_017265.1 RefSeq gene 2139270 2140187 . - . ID=gene1963;Name=YPC_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09840;old_locus_tag=YPC_2179 NC_017265.1 Protein Homology CDS 2139270 2140187 . - 0 ID=cds1904;Parent=gene1963;Dbxref=Genbank:WP_002211696.1;Name=WP_002211696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211696.1;transl_table=11 NC_017265.1 RefSeq gene 2140204 2141202 . - . ID=gene1964;Name=YPC_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09845;old_locus_tag=YPC_2180 NC_017265.1 Protein Homology CDS 2140204 2141202 . - 0 ID=cds1905;Parent=gene1964;Dbxref=Genbank:WP_002211697.1;Name=WP_002211697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211697.1;transl_table=11 NC_017265.1 RefSeq gene 2141202 2144405 . - . ID=gene1965;Name=YPC_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09850;old_locus_tag=YPC_2181 NC_017265.1 Protein Homology CDS 2141202 2144405 . - 0 ID=cds1906;Parent=gene1965;Dbxref=Genbank:WP_002211698.1;Name=WP_002211698.1;gbkey=CDS;product=host specificity protein;protein_id=WP_002211698.1;transl_table=11 NC_017265.1 RefSeq gene 2144581 2144802 . + . ID=gene1966;Name=YPC_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09855 NC_017265.1 Protein Homology CDS 2144581 2144802 . + 0 ID=cds1907;Parent=gene1966;Dbxref=Genbank:WP_002359202.1;Name=WP_002359202.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002359202.1;transl_table=11 NC_017265.1 RefSeq gene 2144771 2144935 . - . ID=gene1967;Name=YPC_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09860;old_locus_tag=YPC_2182 NC_017265.1 Protein Homology CDS 2144771 2144935 . - 0 ID=cds1908;Parent=gene1967;Dbxref=Genbank:WP_002211699.1;Name=WP_002211699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211699.1;transl_table=11 NC_017265.1 RefSeq gene 2144977 2145597 . - . ID=gene1968;Name=YPC_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09865;old_locus_tag=YPC_2183 NC_017265.1 Protein Homology CDS 2144977 2145597 . - 0 ID=cds1909;Parent=gene1968;Dbxref=Genbank:WP_002211700.1;Name=WP_002211700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211700.1;transl_table=11 NC_017265.1 RefSeq gene 2145653 2145868 . - . ID=gene1969;Name=YPC_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09870 NC_017265.1 Protein Homology CDS 2145653 2145868 . - 0 ID=cds1910;Parent=gene1969;Dbxref=Genbank:WP_002211701.1;Name=WP_002211701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211701.1;transl_table=11 NC_017265.1 RefSeq gene 2146011 2146562 . - . ID=gene1970;Name=YPC_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09875;old_locus_tag=YPC_2185 NC_017265.1 Protein Homology CDS 2146011 2146562 . - 0 ID=cds1911;Parent=gene1970;Dbxref=Genbank:WP_002214482.1;Name=WP_002214482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214482.1;transl_table=11 NC_017265.1 RefSeq gene 2146661 2147668 . - . ID=gene1971;Name=YPC_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09880;old_locus_tag=YPC_2186 NC_017265.1 Protein Homology CDS 2146661 2147668 . - 0 ID=cds1912;Parent=gene1971;Dbxref=Genbank:WP_002211704.1;Name=WP_002211704.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211704.1;transl_table=11 NC_017265.1 RefSeq gene 2147742 2147909 . - . ID=gene1972;Name=YPC_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09885;old_locus_tag=YPC_2187 NC_017265.1 Protein Homology CDS 2147742 2147909 . - 0 ID=cds1913;Parent=gene1972;Dbxref=Genbank:WP_002211705.1;Name=WP_002211705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211705.1;transl_table=11 NC_017265.1 RefSeq gene 2148033 2148464 . + . ID=gene1973;Name=YPC_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09890 NC_017265.1 Protein Homology CDS 2148033 2148464 . + 0 ID=cds1914;Parent=gene1973;Dbxref=Genbank:WP_002211706.1;Name=WP_002211706.1;gbkey=CDS;product=Rha family transcriptional regulator;protein_id=WP_002211706.1;transl_table=11 NC_017265.1 RefSeq gene 2148543 2149175 . - . ID=gene1974;Name=YPC_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09895;old_locus_tag=YPC_2189 NC_017265.1 Protein Homology CDS 2148543 2149175 . - 0 ID=cds1915;Parent=gene1974;Dbxref=Genbank:WP_002211707.1;Name=WP_002211707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211707.1;transl_table=11 NC_017265.1 RefSeq gene 2149436 2150146 . - . ID=gene1975;Name=YPC_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09900;old_locus_tag=YPC_2190 NC_017265.1 Protein Homology CDS 2149436 2150146 . - 0 ID=cds1916;Parent=gene1975;Dbxref=Genbank:WP_015683627.1;Name=WP_015683627.1;gbkey=CDS;product=peptidase P60;protein_id=WP_015683627.1;transl_table=11 NC_017265.1 RefSeq gene 2150149 2150901 . - . ID=gene1976;Name=YPC_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09905;old_locus_tag=YPC_2191 NC_017265.1 Protein Homology CDS 2150149 2150901 . - 0 ID=cds1917;Parent=gene1976;Dbxref=Genbank:WP_002211709.1;Name=WP_002211709.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211709.1;transl_table=11 NC_017265.1 RefSeq gene 2151075 2151416 . - . ID=gene1977;Name=YPC_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09910;old_locus_tag=YPC_2192 NC_017265.1 Protein Homology CDS 2151075 2151416 . - 0 ID=cds1918;Parent=gene1977;Dbxref=Genbank:WP_002211710.1;Name=WP_002211710.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211710.1;transl_table=11 NC_017265.1 RefSeq gene 2151419 2154922 . - . ID=gene1978;Name=YPC_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09915;old_locus_tag=YPC_2193 NC_017265.1 Protein Homology CDS 2151419 2154922 . - 0 ID=cds1919;Parent=gene1978;Dbxref=Genbank:WP_002211711.1;Name=WP_002211711.1;gbkey=CDS;product=tail protein;protein_id=WP_002211711.1;transl_table=11 NC_017265.1 RefSeq gene 2154923 2155144 . - . ID=gene1979;Name=YPC_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09920;old_locus_tag=YPC_2194 NC_017265.1 Protein Homology CDS 2154923 2155144 . - 0 ID=cds1920;Parent=gene1979;Dbxref=Genbank:WP_002214476.1;Name=WP_002214476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214476.1;transl_table=11 NC_017265.1 RefSeq gene 2155231 2155542 . - . ID=gene1980;Name=YPC_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09925;old_locus_tag=YPC_2195 NC_017265.1 Protein Homology CDS 2155231 2155542 . - 0 ID=cds1921;Parent=gene1980;Dbxref=Genbank:WP_002211712.1;Name=WP_002211712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211712.1;transl_table=11 NC_017265.1 RefSeq gene 2155555 2156475 . - . ID=gene1981;Name=YPC_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09930;old_locus_tag=YPC_2196 NC_017265.1 Protein Homology CDS 2155555 2156475 . - 0 ID=cds1922;Parent=gene1981;Dbxref=Genbank:WP_002211713.1;Name=WP_002211713.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211713.1;transl_table=11 NC_017265.1 RefSeq gene 2156541 2156948 . - . ID=gene1982;Name=YPC_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09935;old_locus_tag=YPC_2197 NC_017265.1 Protein Homology CDS 2156541 2156948 . - 0 ID=cds1923;Parent=gene1982;Dbxref=Genbank:WP_002211714.1;Name=WP_002211714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211714.1;transl_table=11 NC_017265.1 RefSeq gene 2156945 2157529 . - . ID=gene1983;Name=YPC_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09940;old_locus_tag=YPC_2198 NC_017265.1 Protein Homology CDS 2156945 2157529 . - 0 ID=cds1924;Parent=gene1983;Dbxref=Genbank:WP_002211715.1;Name=WP_002211715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211715.1;transl_table=11 NC_017265.1 RefSeq gene 2157531 2157881 . - . ID=gene1984;Name=YPC_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09945;old_locus_tag=YPC_2199 NC_017265.1 Protein Homology CDS 2157531 2157881 . - 0 ID=cds1925;Parent=gene1984;Dbxref=Genbank:WP_002211716.1;Name=WP_002211716.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211716.1;transl_table=11 NC_017265.1 RefSeq gene 2157883 2158137 . - . ID=gene1985;Name=YPC_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09950;old_locus_tag=YPC_2200 NC_017265.1 Protein Homology CDS 2157883 2158137 . - 0 ID=cds1926;Parent=gene1985;Dbxref=Genbank:WP_002211717.1;Name=WP_002211717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211717.1;transl_table=11 NC_017265.1 RefSeq gene 2158134 2158616 . - . ID=gene1986;Name=YPC_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09955 NC_017265.1 Protein Homology CDS 2158134 2158616 . - 0 ID=cds1927;Parent=gene1986;Dbxref=Genbank:WP_002211718.1;Name=WP_002211718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211718.1;transl_table=11 NC_017265.1 RefSeq gene 2158664 2159869 . - . ID=gene1987;Name=YPC_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09960;old_locus_tag=YPC_2202 NC_017265.1 Protein Homology CDS 2158664 2159869 . - 0 ID=cds1928;Parent=gene1987;Dbxref=Genbank:WP_002211719.1;Name=WP_002211719.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211719.1;transl_table=11 NC_017265.1 RefSeq gene 2159883 2160656 . - . ID=gene1988;Name=YPC_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09965;old_locus_tag=YPC_2203 NC_017265.1 Protein Homology CDS 2159883 2160656 . - 0 ID=cds1929;Parent=gene1988;Dbxref=Genbank:WP_002211720.1;Name=WP_002211720.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211720.1;transl_table=11 NC_017265.1 RefSeq gene 2160778 2161890 . - . ID=gene1989;Name=YPC_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09970;old_locus_tag=YPC_2204 NC_017265.1 Protein Homology CDS 2160778 2161890 . - 0 ID=cds1930;Parent=gene1989;Dbxref=Genbank:WP_002211721.1;Name=WP_002211721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211721.1;transl_table=11 NC_017265.1 RefSeq gene 2161891 2162532 . - . ID=gene1990;Name=YPC_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09975;old_locus_tag=YPC_2205 NC_017265.1 Protein Homology CDS 2161891 2162532 . - 0 ID=cds1931;Parent=gene1990;Dbxref=Genbank:WP_002228446.1;Name=WP_002228446.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228446.1;transl_table=11 NC_017265.1 RefSeq gene 2162551 2163279 . - . ID=gene1991;Name=YPC_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09980;old_locus_tag=YPC_2206 NC_017265.1 Protein Homology CDS 2162551 2163279 . - 0 ID=cds1932;Parent=gene1991;Dbxref=Genbank:WP_002228445.1;Name=WP_002228445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228445.1;transl_table=11 NC_017265.1 RefSeq gene 2163279 2164253 . - . ID=gene1992;Name=YPC_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09985;old_locus_tag=YPC_2207 NC_017265.1 Protein Homology CDS 2163279 2164253 . - 0 ID=cds1933;Parent=gene1992;Dbxref=Genbank:WP_002211722.1;Name=WP_002211722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211722.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2164220 2165539 . + . ID=id183;gbkey=repeat_region NC_017265.1 RefSeq gene 2164258 2165466 . - . ID=gene1993;Name=YPC_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS09990;old_locus_tag=YPC_2208 NC_017265.1 Protein Homology CDS 2164258 2165466 . - 0 ID=cds1934;Parent=gene1993;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2165514 2166091 . - . ID=gene1994;Name=YPC_RS09995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS09995;pseudo=true NC_017265.1 Protein Homology CDS 2165514 2166091 . - 0 ID=cds1935;Parent=gene1994;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase large subunit;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2166101 2166550 . - . ID=gene1995;Name=YPC_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10000;old_locus_tag=YPC_2209 NC_017265.1 Protein Homology CDS 2166101 2166550 . - 0 ID=cds1936;Parent=gene1995;Dbxref=Genbank:WP_002211724.1;Name=WP_002211724.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211724.1;transl_table=11 NC_017265.1 RefSeq gene 2166581 2167216 . - . ID=gene1996;Name=YPC_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10005;old_locus_tag=YPC_2210 NC_017265.1 Protein Homology CDS 2166581 2167216 . - 0 ID=cds1937;Parent=gene1996;Dbxref=Genbank:WP_002211725.1;Name=WP_002211725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211725.1;transl_table=11 NC_017265.1 RefSeq gene 2167673 2168386 . - . ID=gene1997;Name=YPC_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10010;old_locus_tag=YPC_2211 NC_017265.1 Protein Homology CDS 2167673 2168386 . - 0 ID=cds1938;Parent=gene1997;Dbxref=Genbank:WP_042468489.1;Name=WP_042468489.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042468489.1;transl_table=11 NC_017265.1 RefSeq gene 2168932 2169390 . - . ID=gene1998;Name=YPC_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10015;old_locus_tag=YPC_2213 NC_017265.1 Protein Homology CDS 2168932 2169390 . - 0 ID=cds1939;Parent=gene1998;Dbxref=Genbank:WP_002211729.1;Name=WP_002211729.1;gbkey=CDS;product=endopeptidase;protein_id=WP_002211729.1;transl_table=11 NC_017265.1 RefSeq gene 2169375 2169887 . - . ID=gene1999;Name=YPC_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10020;old_locus_tag=YPC_2214 NC_017265.1 Protein Homology CDS 2169375 2169887 . - 0 ID=cds1940;Parent=gene1999;Dbxref=Genbank:WP_002211730.1;Name=WP_002211730.1;gbkey=CDS;product=glycoside hydrolase;protein_id=WP_002211730.1;transl_table=11 NC_017265.1 RefSeq gene 2170360 2170635 . + . ID=gene2000;Name=YPC_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10025;old_locus_tag=YPC_2216 NC_017265.1 Protein Homology CDS 2170360 2170635 . + 0 ID=cds1941;Parent=gene2000;Dbxref=Genbank:WP_002215644.1;Name=WP_002215644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215644.1;transl_table=11 NC_017265.1 RefSeq gene 2170632 2170841 . - . ID=gene2001;Name=YPC_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10030;old_locus_tag=YPC_2217 NC_017265.1 Protein Homology CDS 2170632 2170841 . - 0 ID=cds1942;Parent=gene2001;Dbxref=Genbank:WP_002211731.1;Name=WP_002211731.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211731.1;transl_table=11 NC_017265.1 RefSeq gene 2171004 2171180 . + . ID=gene2002;Name=YPC_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10035;old_locus_tag=YPC_2218 NC_017265.1 Protein Homology CDS 2171004 2171180 . + 0 ID=cds1943;Parent=gene2002;Dbxref=Genbank:WP_002393183.1;Name=WP_002393183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002393183.1;transl_table=11 NC_017265.1 RefSeq gene 2171265 2171828 . - . ID=gene2003;Name=YPC_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10040;old_locus_tag=YPC_2219 NC_017265.1 Protein Homology CDS 2171265 2171828 . - 0 ID=cds1944;Parent=gene2003;Dbxref=Genbank:WP_002211732.1;Name=WP_002211732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211732.1;transl_table=11 NC_017265.1 RefSeq gene 2171877 2172095 . - . ID=gene2004;Name=YPC_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10045 NC_017265.1 Protein Homology CDS 2171877 2172095 . - 0 ID=cds1945;Parent=gene2004;Dbxref=Genbank:WP_002215638.1;Name=WP_002215638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215638.1;transl_table=11 NC_017265.1 RefSeq gene 2172099 2172488 . - . ID=gene2005;Name=YPC_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10050;old_locus_tag=YPC_2220 NC_017265.1 Protein Homology CDS 2172099 2172488 . - 0 ID=cds1946;Parent=gene2005;Dbxref=Genbank:WP_002215636.1;Name=WP_002215636.1;gbkey=CDS;product=antitermination protein;protein_id=WP_002215636.1;transl_table=11 NC_017265.1 RefSeq gene 2172489 2173094 . - . ID=gene2006;Name=YPC_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10055;old_locus_tag=YPC_2221 NC_017265.1 Protein Homology CDS 2172489 2173094 . - 0 ID=cds1947;Parent=gene2006;Dbxref=Genbank:WP_002211735.1;Name=WP_002211735.1;gbkey=CDS;product=protein ninG;protein_id=WP_002211735.1;transl_table=11 NC_017265.1 RefSeq gene 2173168 2173614 . - . ID=gene2007;Name=YPC_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10060;old_locus_tag=YPC_2222 NC_017265.1 Protein Homology CDS 2173168 2173614 . - 0 ID=cds1948;Parent=gene2007;Dbxref=Genbank:WP_002211736.1;Name=WP_002211736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211736.1;transl_table=11 NC_017265.1 RefSeq gene 2173641 2174339 . + . ID=gene2008;Name=YPC_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10065;old_locus_tag=YPC_2223 NC_017265.1 Protein Homology CDS 2173641 2174339 . + 0 ID=cds1949;Parent=gene2008;Dbxref=Genbank:WP_002211737.1;Name=WP_002211737.1;gbkey=CDS;product=DNA methyltransferase;protein_id=WP_002211737.1;transl_table=11 NC_017265.1 RefSeq gene 2174639 2174899 . + . ID=gene2009;Name=YPC_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10070;old_locus_tag=YPC_2224 NC_017265.1 Protein Homology CDS 2174639 2174899 . + 0 ID=cds1950;Parent=gene2009;Dbxref=Genbank:WP_002215632.1;Name=WP_002215632.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002215632.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2175000 2176956 . + . ID=id184;gbkey=repeat_region NC_017265.1 RefSeq gene 2175067 2175846 . - . ID=gene2010;Name=YPC_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10075;old_locus_tag=YPC_2225 NC_017265.1 Protein Homology CDS 2175067 2175846 . - 0 ID=cds1951;Parent=gene2010;Dbxref=Genbank:WP_042468497.1;Name=WP_042468497.1;gbkey=CDS;product=transposase;protein_id=WP_042468497.1;transl_table=11 NC_017265.1 RefSeq gene 2175846 2176868 . - . ID=gene2011;Name=YPC_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10080;old_locus_tag=YPC_2226 NC_017265.1 Protein Homology CDS 2175846 2176868 . - 0 ID=cds1952;Parent=gene2011;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 2176938 2178175 . + . ID=gene2012;Name=YPC_RS10085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS10085;old_locus_tag=YPC_2227;pseudo=true NC_017265.1 Protein Homology CDS 2176938 2178175 . + 0 ID=cds1953;Parent=gene2012;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2178202 2178648 . - . ID=gene2013;Name=YPC_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10090;old_locus_tag=YPC_2228 NC_017265.1 Protein Homology CDS 2178202 2178648 . - 0 ID=cds1954;Parent=gene2013;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11 NC_017265.1 RefSeq gene 2178751 2179407 . - . ID=gene2014;Name=YPC_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10095;old_locus_tag=YPC_2229 NC_017265.1 Protein Homology CDS 2178751 2179407 . - 0 ID=cds1955;Parent=gene2014;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11 NC_017265.1 RefSeq gene 2179478 2180407 . - . ID=gene2015;Name=YPC_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10100;old_locus_tag=YPC_2230 NC_017265.1 Protein Homology CDS 2179478 2180407 . - 0 ID=cds1956;Parent=gene2015;Dbxref=Genbank:WP_002232866.1;Name=WP_002232866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002232866.1;transl_table=11 NC_017265.1 RefSeq gene 2180703 2180975 . - . ID=gene2016;Name=YPC_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10105;old_locus_tag=YPC_2233 NC_017265.1 Protein Homology CDS 2180703 2180975 . - 0 ID=cds1957;Parent=gene2016;Dbxref=Genbank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211743.1;transl_table=11 NC_017265.1 RefSeq gene 2181696 2182382 . + . ID=gene2017;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YPC_RS10110;old_locus_tag=YPC_2234 NC_017265.1 Protein Homology CDS 2181696 2182382 . + 0 ID=cds1958;Parent=gene2017;Dbxref=Genbank:WP_002220631.1;Name=WP_002220631.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11 NC_017265.1 RefSeq gene 2182407 2183219 . + . ID=gene2018;Name=YPC_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10115;old_locus_tag=YPC_2235 NC_017265.1 Protein Homology CDS 2182407 2183219 . + 0 ID=cds1959;Parent=gene2018;Dbxref=Genbank:WP_002211179.1;Name=WP_002211179.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_002211179.1;transl_table=11 NC_017265.1 RefSeq gene 2183223 2183492 . + . ID=gene2019;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YPC_RS10120;old_locus_tag=YPC_2236 NC_017265.1 Protein Homology CDS 2183223 2183492 . + 0 ID=cds1960;Parent=gene2019;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11 NC_017265.1 RefSeq gene 2183729 2184850 . - . ID=gene2020;Name=YPC_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10125;old_locus_tag=YPC_2237 NC_017265.1 Protein Homology CDS 2183729 2184850 . - 0 ID=cds1961;Parent=gene2020;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NC_017265.1 RefSeq gene 2185010 2186698 . - . ID=gene2021;Name=YPC_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10130;old_locus_tag=YPC_2238 NC_017265.1 Protein Homology CDS 2185010 2186698 . - 0 ID=cds1962;Parent=gene2021;Dbxref=Genbank:WP_002220632.1;Name=WP_002220632.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002220632.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2187189 2187304 . + . ID=id185;gbkey=repeat_region NC_017265.1 RefSeq gene 2187341 2187946 . - . ID=gene2022;Name=YPC_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10135;old_locus_tag=YPC_2240 NC_017265.1 Protein Homology CDS 2187341 2187946 . - 0 ID=cds1963;Parent=gene2022;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11 NC_017265.1 RefSeq gene 2188083 2188781 . - . ID=gene2023;Name=YPC_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10140;old_locus_tag=YPC_2241 NC_017265.1 Protein Homology CDS 2188083 2188781 . - 0 ID=cds1964;Parent=gene2023;Dbxref=Genbank:WP_002211184.1;Name=WP_002211184.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_002211184.1;transl_table=11 NC_017265.1 RefSeq gene 2188853 2190757 . - . ID=gene2024;Name=YPC_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10145;old_locus_tag=YPC_2243 NC_017265.1 Protein Homology CDS 2188853 2190757 . - 0 ID=cds1965;Parent=gene2024;Dbxref=Genbank:WP_002211185.1;Name=WP_002211185.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_002211185.1;transl_table=11 NC_017265.1 RefSeq gene 2190888 2191232 . + . ID=gene2025;Name=YPC_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10150;old_locus_tag=YPC_2244 NC_017265.1 Protein Homology CDS 2190888 2191232 . + 0 ID=cds1966;Parent=gene2025;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11 NC_017265.1 RefSeq gene 2191364 2191693 . - . ID=gene2026;Name=YPC_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10155 NC_017265.1 Protein Homology CDS 2191364 2191693 . - 0 ID=cds1967;Parent=gene2026;Dbxref=Genbank:WP_002211187.1;Name=WP_002211187.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_002211187.1;transl_table=11 NC_017265.1 RefSeq gene 2191680 2192123 . - . ID=gene2027;Name=YPC_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10160 NC_017265.1 Protein Homology CDS 2191680 2192123 . - 0 ID=cds1968;Parent=gene2027;Dbxref=Genbank:WP_002211188.1;Name=WP_002211188.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_002211188.1;transl_table=11 NC_017265.1 RefSeq gene 2192838 2193479 . - . ID=gene2028;Name=YPC_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10165;old_locus_tag=YPC_2247 NC_017265.1 Protein Homology CDS 2192838 2193479 . - 0 ID=cds1969;Parent=gene2028;Dbxref=Genbank:WP_002211190.1;Name=WP_002211190.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_002211190.1;transl_table=11 NC_017265.1 RefSeq gene 2193721 2195205 . - . ID=gene2029;Name=YPC_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10170;old_locus_tag=YPC_2248 NC_017265.1 Protein Homology CDS 2193721 2195205 . - 0 ID=cds1970;Parent=gene2029;Dbxref=Genbank:WP_002211191.1;Name=WP_002211191.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_002211191.1;transl_table=11 NC_017265.1 RefSeq gene 2195558 2196427 . + . ID=gene2030;Name=YPC_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10175;old_locus_tag=YPC_2249 NC_017265.1 Protein Homology CDS 2195558 2196427 . + 0 ID=cds1971;Parent=gene2030;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NC_017265.1 RefSeq gene 2196757 2198199 . + . ID=gene2031;Name=YPC_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10180;old_locus_tag=YPC_2250 NC_017265.1 Protein Homology CDS 2196757 2198199 . + 0 ID=cds1972;Parent=gene2031;Dbxref=Genbank:WP_015683633.1;Name=WP_015683633.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_015683633.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2198248 2198424 . + . ID=id186;gbkey=repeat_region NC_017265.1 RefSeq gene 2198544 2199506 . - . ID=gene2032;Name=YPC_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10185;old_locus_tag=YPC_2252 NC_017265.1 Protein Homology CDS 2198544 2199506 . - 0 ID=cds1973;Parent=gene2032;Dbxref=Genbank:WP_002211194.1;Name=WP_002211194.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_002211194.1;transl_table=11 NC_017265.1 RefSeq gene 2199773 2201089 . - . ID=gene2033;Name=YPC_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10190;old_locus_tag=YPC_2253 NC_017265.1 Protein Homology CDS 2199773 2201089 . - 0 ID=cds1974;Parent=gene2033;Dbxref=Genbank:WP_002228437.1;Name=WP_002228437.1;gbkey=CDS;product=peptidase;protein_id=WP_002228437.1;transl_table=11 NC_017265.1 RefSeq gene 2201110 2202066 . - . ID=gene2034;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=YPC_RS10195;old_locus_tag=YPC_2254 NC_017265.1 Protein Homology CDS 2201110 2202066 . - 0 ID=cds1975;Parent=gene2034;Dbxref=Genbank:WP_002227944.1;Name=WP_002227944.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_002227944.1;transl_table=11 NC_017265.1 RefSeq gene 2202142 2202900 . + . ID=gene2035;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=YPC_RS10200;old_locus_tag=YPC_2255 NC_017265.1 Protein Homology CDS 2202142 2202900 . + 0 ID=cds1976;Parent=gene2035;Dbxref=Genbank:WP_002228434.1;Name=WP_002228434.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_002228434.1;transl_table=11 NC_017265.1 RefSeq gene 2202897 2203682 . + . ID=gene2036;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=YPC_RS10205;old_locus_tag=YPC_2256 NC_017265.1 Protein Homology CDS 2202897 2203682 . + 0 ID=cds1977;Parent=gene2036;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11 NC_017265.1 RefSeq gene 2203737 2204741 . - . ID=gene2037;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YPC_RS10210;old_locus_tag=YPC_2257 NC_017265.1 Protein Homology CDS 2203737 2204741 . - 0 ID=cds1978;Parent=gene2037;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NC_017265.1 RefSeq gene 2204903 2205517 . - . ID=gene2038;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YPC_RS10215;old_locus_tag=YPC_2258 NC_017265.1 Protein Homology CDS 2204903 2205517 . - 0 ID=cds1979;Parent=gene2038;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11 NC_017265.1 RefSeq gene 2205800 2206321 . - . ID=gene2039;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YPC_RS10220;old_locus_tag=YPC_2259 NC_017265.1 Protein Homology CDS 2205800 2206321 . - 0 ID=cds1980;Parent=gene2039;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NC_017265.1 RefSeq gene 2206530 2207273 . - . ID=gene2040;Name=YPC_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10225;old_locus_tag=YPC_2260 NC_017265.1 Protein Homology CDS 2206530 2207273 . - 0 ID=cds1981;Parent=gene2040;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NC_017265.1 RefSeq gene 2207331 2207774 . - . ID=gene2041;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YPC_RS10230;old_locus_tag=YPC_2261 NC_017265.1 Protein Homology CDS 2207331 2207774 . - 0 ID=cds1982;Parent=gene2041;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11 NC_017265.1 RefSeq gene 2207774 2209570 . - . ID=gene2042;Name=YPC_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10235;old_locus_tag=YPC_2262 NC_017265.1 Protein Homology CDS 2207774 2209570 . - 0 ID=cds1983;Parent=gene2042;Dbxref=Genbank:WP_002211204.1;Name=WP_002211204.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2210156 2210621 . + . ID=id187;gbkey=repeat_region NC_017265.1 RefSeq gene 2210628 2211443 . + . ID=gene2043;Name=YPC_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10240;old_locus_tag=YPC_2263 NC_017265.1 Protein Homology CDS 2210628 2211443 . + 0 ID=cds1984;Parent=gene2043;Dbxref=Genbank:WP_002211205.1;Name=WP_002211205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211205.1;transl_table=11 NC_017265.1 RefSeq gene 2211623 2212018 . + . ID=gene2044;Name=YPC_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10245;old_locus_tag=YPC_2264 NC_017265.1 Protein Homology CDS 2211623 2212018 . + 0 ID=cds1985;Parent=gene2044;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11 NC_017265.1 RefSeq gene 2212209 2213012 . + . ID=gene2045;Name=YPC_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10250 NC_017265.1 Protein Homology CDS 2212209 2213012 . + 0 ID=cds1986;Parent=gene2045;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11 NC_017265.1 RefSeq gene 2213009 2213980 . + . ID=gene2046;Name=YPC_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10255 NC_017265.1 Protein Homology CDS 2213009 2213980 . + 0 ID=cds1987;Parent=gene2046;Dbxref=Genbank:WP_002211208.1;Name=WP_002211208.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_002211208.1;transl_table=11 NC_017265.1 RefSeq gene 2214173 2214808 . - . ID=gene2047;Name=YPC_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10260;old_locus_tag=YPC_2267 NC_017265.1 Protein Homology CDS 2214173 2214808 . - 0 ID=cds1988;Parent=gene2047;Dbxref=Genbank:WP_016596750.1;Name=WP_016596750.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_016596750.1;transl_table=11 NC_017265.1 RefSeq gene 2215170 2215745 . - . ID=gene2048;Name=YPC_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10265;old_locus_tag=YPC_2269 NC_017265.1 Protein Homology CDS 2215170 2215745 . - 0 ID=cds1989;Parent=gene2048;Dbxref=Genbank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211210.1;transl_table=11 NC_017265.1 RefSeq gene 2216360 2218090 . + . ID=gene2049;Name=YPC_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10270;old_locus_tag=YPC_2272 NC_017265.1 Protein Homology CDS 2216360 2218090 . + 0 ID=cds1990;Parent=gene2049;Dbxref=Genbank:WP_002228433.1;Name=WP_002228433.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_002228433.1;transl_table=11 NC_017265.1 RefSeq gene 2218321 2222796 . - . ID=gene2050;Name=YPC_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10275;old_locus_tag=YPC_2273 NC_017265.1 Protein Homology CDS 2218321 2222796 . - 0 ID=cds1991;Parent=gene2050;Dbxref=Genbank:WP_032485806.1;Name=WP_032485806.1;gbkey=CDS;product=hemolysin;protein_id=WP_032485806.1;transl_table=11 NC_017265.1 RefSeq gene 2223081 2224742 . - . ID=gene2051;Name=YPC_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10280;old_locus_tag=YPC_2274 NC_017265.1 Protein Homology CDS 2223081 2224742 . - 0 ID=cds1992;Parent=gene2051;Dbxref=Genbank:WP_002211213.1;Name=WP_002211213.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002211213.1;transl_table=11 NC_017265.1 RefSeq gene 2225222 2226757 . - . ID=gene2052;Name=YPC_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10285;old_locus_tag=YPC_2275 NC_017265.1 Protein Homology CDS 2225222 2226757 . - 0 ID=cds1993;Parent=gene2052;Dbxref=Genbank:WP_002211214.1;Name=WP_002211214.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211214.1;transl_table=11 NC_017265.1 RefSeq gene 2227024 2227936 . - . ID=gene2053;Name=YPC_RS10290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS10290;old_locus_tag=YPC_2276;pseudo=true NC_017265.1 Protein Homology CDS 2227024 2227936 . - 0 ID=cds1994;Parent=gene2053;exception=annotated by transcript or proteomic data;gbkey=CDS;product=virulence factor MviM;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2227937 2228635 . - . ID=gene2054;Name=YPC_RS10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS10295;old_locus_tag=YPC_2277;partial=true;pseudo=true;start_range=.,2227937 NC_017265.1 Protein Homology CDS 2227937 2228635 . - 0 ID=cds1995;Parent=gene2054;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2227937;transl_table=11 NC_017265.1 RefSeq gene 2228643 2229227 . - . ID=gene2055;Name=YPC_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10300;old_locus_tag=YPC_2278 NC_017265.1 Protein Homology CDS 2228643 2229227 . - 0 ID=cds1996;Parent=gene2055;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NC_017265.1 RefSeq gene 2229521 2230726 . + . ID=gene2056;Name=YPC_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10305;old_locus_tag=YPC_2279 NC_017265.1 Protein Homology CDS 2229521 2230726 . + 0 ID=cds1997;Parent=gene2056;Dbxref=Genbank:WP_002211217.1;Name=WP_002211217.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_002211217.1;transl_table=11 NC_017265.1 RefSeq gene 2231121 2231684 . + . ID=gene2057;Name=YPC_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10310;old_locus_tag=YPC_2281 NC_017265.1 Protein Homology CDS 2231121 2231684 . + 0 ID=cds1998;Parent=gene2057;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2231746 2232084 . + . ID=id188;gbkey=repeat_region NC_017265.1 RefSeq gene 2232138 2232698 . - . ID=gene2058;Name=YPC_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10315;old_locus_tag=YPC_2285 NC_017265.1 Protein Homology CDS 2232138 2232698 . - 0 ID=cds1999;Parent=gene2058;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NC_017265.1 RefSeq gene 2232735 2233472 . - . ID=gene2059;Name=YPC_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10320;old_locus_tag=YPC_2286 NC_017265.1 Protein Homology CDS 2232735 2233472 . - 0 ID=cds2000;Parent=gene2059;Dbxref=Genbank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NC_017265.1 RefSeq gene 2233761 2233850 . + . ID=gene2060;Name=YPC_RS10325;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS10325;old_locus_tag=YPC_2287 NC_017265.1 tRNAscan-SE tRNA 2233761 2233850 . + . ID=rna56;Parent=gene2060;anticodon=(pos:2233795..2233797);gbkey=tRNA;product=tRNA-Ser NC_017265.1 tRNAscan-SE exon 2233761 2233850 . + . ID=id189;Parent=rna56;anticodon=(pos:2233795..2233797);gbkey=tRNA;product=tRNA-Ser NC_017265.1 RefSeq gene 2234107 2235222 . - . ID=gene2061;Name=YPC_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10330;old_locus_tag=YPC_2288 NC_017265.1 Protein Homology CDS 2234107 2235222 . - 0 ID=cds2001;Parent=gene2061;Dbxref=Genbank:WP_015683638.1;Name=WP_015683638.1;gbkey=CDS;product=ROK family transcriptional regulator;protein_id=WP_015683638.1;transl_table=11 NC_017265.1 RefSeq gene 2235236 2236066 . - . ID=gene2062;Name=YPC_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10335;old_locus_tag=YPC_2289 NC_017265.1 Protein Homology CDS 2235236 2236066 . - 0 ID=cds2002;Parent=gene2062;Dbxref=Genbank:WP_002211223.1;Name=WP_002211223.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11 NC_017265.1 RefSeq gene 2236281 2237348 . + . ID=gene2063;Name=YPC_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10340;old_locus_tag=YPC_2290 NC_017265.1 Protein Homology CDS 2236281 2237348 . + 0 ID=cds2003;Parent=gene2063;Dbxref=Genbank:WP_015683639.1;Name=WP_015683639.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_015683639.1;transl_table=11 NC_017265.1 RefSeq gene 2237345 2238211 . + . ID=gene2064;Name=YPC_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10345;old_locus_tag=YPC_2291 NC_017265.1 Protein Homology CDS 2237345 2238211 . + 0 ID=cds2004;Parent=gene2064;Dbxref=Genbank:WP_002211226.1;Name=WP_002211226.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211226.1;transl_table=11 NC_017265.1 RefSeq gene 2238208 2239044 . + . ID=gene2065;Name=YPC_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10350;old_locus_tag=YPC_2292 NC_017265.1 Protein Homology CDS 2238208 2239044 . + 0 ID=cds2005;Parent=gene2065;Dbxref=Genbank:WP_002211227.1;Name=WP_002211227.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NC_017265.1 RefSeq gene 2239064 2240146 . + . ID=gene2066;Name=YPC_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10355;old_locus_tag=YPC_2293 NC_017265.1 Protein Homology CDS 2239064 2240146 . + 0 ID=cds2006;Parent=gene2066;Dbxref=Genbank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211228.1;transl_table=11 NC_017265.1 RefSeq gene 2240470 2241321 . + . ID=gene2067;Name=YPC_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10360;old_locus_tag=YPC_2294 NC_017265.1 Protein Homology CDS 2240470 2241321 . + 0 ID=cds2007;Parent=gene2067;Dbxref=Genbank:WP_029834536.1;Name=WP_029834536.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_029834536.1;transl_table=11 NC_017265.1 RefSeq gene 2241463 2241552 . + . ID=gene2068;Name=YPC_RS10365;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS10365;old_locus_tag=YPC_2295 NC_017265.1 tRNAscan-SE tRNA 2241463 2241552 . + . ID=rna57;Parent=gene2068;anticodon=(pos:2241497..2241499);gbkey=tRNA;product=tRNA-Ser NC_017265.1 tRNAscan-SE exon 2241463 2241552 . + . ID=id190;Parent=rna57;anticodon=(pos:2241497..2241499);gbkey=tRNA;product=tRNA-Ser NC_017265.1 RefSeq gene 2241854 2242150 . + . ID=gene2069;Name=YPC_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10370 NC_017265.1 Protein Homology CDS 2241854 2242150 . + 0 ID=cds2008;Parent=gene2069;Dbxref=Genbank:WP_002217150.1;Name=WP_002217150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217150.1;transl_table=11 NC_017265.1 RefSeq gene 2242389 2244086 . + . ID=gene2070;Name=YPC_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10375;old_locus_tag=YPC_2296 NC_017265.1 Protein Homology CDS 2242389 2244086 . + 0 ID=cds2009;Parent=gene2070;Dbxref=Genbank:WP_002224472.1;Name=WP_002224472.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_002224472.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2244129 2244300 . + . ID=id191;gbkey=repeat_region NC_017265.1 RefSeq gene 2244441 2245295 . - . ID=gene2071;Name=YPC_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10380;old_locus_tag=YPC_2298 NC_017265.1 Protein Homology CDS 2244441 2245295 . - 0 ID=cds2010;Parent=gene2071;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11 NC_017265.1 RefSeq gene 2245391 2246200 . - . ID=gene2072;Name=YPC_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10385;old_locus_tag=YPC_2299 NC_017265.1 Protein Homology CDS 2245391 2246200 . - 0 ID=cds2011;Parent=gene2072;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11 NC_017265.1 RefSeq gene 2246197 2246598 . - . ID=gene2073;Name=YPC_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10390;old_locus_tag=YPC_2300 NC_017265.1 Protein Homology CDS 2246197 2246598 . - 0 ID=cds2012;Parent=gene2073;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11 NC_017265.1 RefSeq gene 2246662 2247492 . - . ID=gene2074;Name=YPC_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10395;old_locus_tag=YPC_2301 NC_017265.1 Protein Homology CDS 2246662 2247492 . - 0 ID=cds2013;Parent=gene2074;Dbxref=Genbank:WP_002211235.1;Name=WP_002211235.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=release factor glutamine methyltransferase;protein_id=WP_002211235.1;transl_table=11 NC_017265.1 RefSeq gene 2247492 2248574 . - . ID=gene2075;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YPC_RS10400;old_locus_tag=YPC_2302 NC_017265.1 Protein Homology CDS 2247492 2248574 . - 0 ID=cds2014;Parent=gene2075;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NC_017265.1 RefSeq gene 2248607 2249869 . - . ID=gene2076;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YPC_RS10405;old_locus_tag=YPC_2303 NC_017265.1 Protein Homology CDS 2248607 2249869 . - 0 ID=cds2015;Parent=gene2076;Dbxref=Genbank:WP_002211237.1;Name=WP_002211237.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NC_017265.1 RefSeq gene 2250175 2250798 . + . ID=gene2077;Name=YPC_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10410;old_locus_tag=YPC_2304 NC_017265.1 Protein Homology CDS 2250175 2250798 . + 0 ID=cds2016;Parent=gene2077;Dbxref=Genbank:WP_002224468.1;Name=WP_002224468.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_002224468.1;transl_table=11 NC_017265.1 RefSeq gene 2250800 2251699 . + . ID=gene2078;Name=YPC_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10415;old_locus_tag=YPC_2305 NC_017265.1 Protein Homology CDS 2250800 2251699 . + 0 ID=cds2017;Parent=gene2078;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NC_017265.1 RefSeq gene 2251880 2251990 . + . ID=gene2079;Name=YPC_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10420 NC_017265.1 Protein Homology CDS 2251880 2251990 . + 0 ID=cds2018;Parent=gene2079;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11 NC_017265.1 RefSeq gene 2252040 2252987 . + . ID=gene2080;Name=YPC_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10425;old_locus_tag=YPC_2306 NC_017265.1 Protein Homology CDS 2252040 2252987 . + 0 ID=cds2019;Parent=gene2080;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11 NC_017265.1 RefSeq gene 2253085 2253198 . + . ID=gene2081;Name=YPC_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10430;old_locus_tag=YPC_2307 NC_017265.1 Protein Homology CDS 2253085 2253198 . + 0 ID=cds2020;Parent=gene2081;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11 NC_017265.1 RefSeq gene 2253189 2253461 . - . ID=gene2082;Name=YPC_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10435;old_locus_tag=YPC_2308 NC_017265.1 Protein Homology CDS 2253189 2253461 . - 0 ID=cds2021;Parent=gene2082;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11 NC_017265.1 RefSeq gene 2253823 2254413 . + . ID=gene2083;Name=YPC_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10440;old_locus_tag=YPC_2310 NC_017265.1 Protein Homology CDS 2253823 2254413 . + 0 ID=cds2022;Parent=gene2083;Dbxref=Genbank:WP_002218168.1;Name=WP_002218168.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_002218168.1;transl_table=11 NC_017265.1 RefSeq gene 2254577 2255668 . + . ID=gene2084;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YPC_RS10445;old_locus_tag=YPC_2311 NC_017265.1 Protein Homology CDS 2254577 2255668 . + 0 ID=cds2023;Parent=gene2084;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11 NC_017265.1 RefSeq gene 2256091 2256279 . + . ID=gene2085;Name=YPC_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10450 NC_017265.1 Protein Homology CDS 2256091 2256279 . + 0 ID=cds2024;Parent=gene2085;Dbxref=Genbank:WP_002354205.1;Name=WP_002354205.1;gbkey=CDS;product=transposase;protein_id=WP_002354205.1;transl_table=11 NC_017265.1 RefSeq gene 2256297 2256806 . + . ID=gene2086;Name=YPC_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10455;old_locus_tag=YPC_2312 NC_017265.1 Protein Homology CDS 2256297 2256806 . + 0 ID=cds2025;Parent=gene2086;Dbxref=Genbank:WP_002211246.1;Name=WP_002211246.1;gbkey=CDS;product=integrase;protein_id=WP_002211246.1;transl_table=11 NC_017265.1 RefSeq gene 2256854 2257252 . - . ID=gene2087;Name=YPC_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10460;old_locus_tag=YPC_2313 NC_017265.1 Protein Homology CDS 2256854 2257252 . - 0 ID=cds2026;Parent=gene2087;Dbxref=Genbank:WP_002211247.1;Name=WP_002211247.1;gbkey=CDS;product=rhodanese;protein_id=WP_002211247.1;transl_table=11 NC_017265.1 RefSeq gene 2257260 2258090 . - . ID=gene2088;Name=YPC_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10465;old_locus_tag=YPC_2314 NC_017265.1 Protein Homology CDS 2257260 2258090 . - 0 ID=cds2027;Parent=gene2088;Dbxref=Genbank:WP_002211248.1;Name=WP_002211248.1;gbkey=CDS;product=esterase;protein_id=WP_002211248.1;transl_table=11 NC_017265.1 RefSeq gene 2258087 2258743 . - . ID=gene2089;Name=YPC_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10470;old_locus_tag=YPC_2315 NC_017265.1 Protein Homology CDS 2258087 2258743 . - 0 ID=cds2028;Parent=gene2089;Dbxref=Genbank:WP_002216887.1;Name=WP_002216887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216887.1;transl_table=11 NC_017265.1 RefSeq gene 2259374 2260216 . + . ID=gene2090;Name=YPC_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10475;old_locus_tag=YPC_2316 NC_017265.1 Protein Homology CDS 2259374 2260216 . + 0 ID=cds2029;Parent=gene2090;Dbxref=Genbank:WP_002211249.1;Name=WP_002211249.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211249.1;transl_table=11 NC_017265.1 RefSeq gene 2260425 2261120 . - . ID=gene2091;Name=YPC_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10480;old_locus_tag=YPC_2317 NC_017265.1 Protein Homology CDS 2260425 2261120 . - 0 ID=cds2030;Parent=gene2091;Dbxref=Genbank:WP_002211250.1;Name=WP_002211250.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211250.1;transl_table=11 NC_017265.1 RefSeq gene 2261135 2261800 . - . ID=gene2092;Name=YPC_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10485;old_locus_tag=YPC_2318 NC_017265.1 Protein Homology CDS 2261135 2261800 . - 0 ID=cds2031;Parent=gene2092;Dbxref=Genbank:WP_002211251.1;Name=WP_002211251.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11 NC_017265.1 RefSeq gene 2261991 2263082 . - . ID=gene2093;Name=YPC_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10490;old_locus_tag=YPC_2319 NC_017265.1 Protein Homology CDS 2261991 2263082 . - 0 ID=cds2032;Parent=gene2093;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11 NC_017265.1 RefSeq gene 2263347 2264039 . + . ID=gene2094;Name=YPC_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10495;old_locus_tag=YPC_2320 NC_017265.1 Protein Homology CDS 2263347 2264039 . + 0 ID=cds2033;Parent=gene2094;Dbxref=Genbank:WP_002211253.1;Name=WP_002211253.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211253.1;transl_table=11 NC_017265.1 RefSeq gene 2264051 2265436 . + . ID=gene2095;Name=YPC_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10500;old_locus_tag=YPC_2321 NC_017265.1 Protein Homology CDS 2264051 2265436 . + 0 ID=cds2034;Parent=gene2095;Dbxref=Genbank:WP_002211254.1;Name=WP_002211254.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11 NC_017265.1 RefSeq gene 2265713 2266135 . + . ID=gene2096;Name=YPC_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10505;old_locus_tag=YPC_2322 NC_017265.1 Protein Homology CDS 2265713 2266135 . + 0 ID=cds2035;Parent=gene2096;Dbxref=Genbank:WP_002211255.1;Name=WP_002211255.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002211255.1;transl_table=11 NC_017265.1 RefSeq gene 2266190 2266660 . + . ID=gene2097;Name=YPC_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10510;old_locus_tag=YPC_2323 NC_017265.1 Protein Homology CDS 2266190 2266660 . + 0 ID=cds2036;Parent=gene2097;Dbxref=Genbank:WP_002211256.1;Name=WP_002211256.1;gbkey=CDS;product=cupin;protein_id=WP_002211256.1;transl_table=11 NC_017265.1 RefSeq gene 2266873 2267946 . + . ID=gene2098;Name=YPC_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10515;old_locus_tag=YPC_2325 NC_017265.1 Protein Homology CDS 2266873 2267946 . + 0 ID=cds2037;Parent=gene2098;Dbxref=Genbank:WP_002211257.1;Name=WP_002211257.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11 NC_017265.1 RefSeq gene 2268737 2269642 . + . ID=gene2099;Name=YPC_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10520;old_locus_tag=YPC_2326 NC_017265.1 Protein Homology CDS 2268737 2269642 . + 0 ID=cds2038;Parent=gene2099;Dbxref=Genbank:WP_002211258.1;Name=WP_002211258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211258.1;transl_table=11 NC_017265.1 RefSeq gene 2269648 2270580 . + . ID=gene2100;Name=YPC_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10525;old_locus_tag=YPC_2327 NC_017265.1 Protein Homology CDS 2269648 2270580 . + 0 ID=cds2039;Parent=gene2100;Dbxref=Genbank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NC_017265.1 RefSeq gene 2270567 2271517 . + . ID=gene2101;Name=YPC_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10530;old_locus_tag=YPC_2328 NC_017265.1 Protein Homology CDS 2270567 2271517 . + 0 ID=cds2040;Parent=gene2101;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NC_017265.1 RefSeq gene 2271858 2272538 . + . ID=gene2102;Name=YPC_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10535;old_locus_tag=YPC_2329 NC_017265.1 Protein Homology CDS 2271858 2272538 . + 0 ID=cds2041;Parent=gene2102;Dbxref=Genbank:WP_015683640.1;Name=WP_015683640.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_015683640.1;transl_table=11 NC_017265.1 RefSeq gene 2272643 2273302 . + . ID=gene2103;Name=YPC_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10540;old_locus_tag=YPC_2330 NC_017265.1 Protein Homology CDS 2272643 2273302 . + 0 ID=cds2042;Parent=gene2103;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11 NC_017265.1 RefSeq gene 2273437 2274075 . - . ID=gene2104;Name=YPC_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10545;old_locus_tag=YPC_2331 NC_017265.1 Protein Homology CDS 2273437 2274075 . - 0 ID=cds2043;Parent=gene2104;Dbxref=Genbank:WP_002211263.1;Name=WP_002211263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211263.1;transl_table=11 NC_017265.1 RefSeq gene 2274131 2274319 . + . ID=gene2105;Name=YPC_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10550 NC_017265.1 Protein Homology CDS 2274131 2274319 . + 0 ID=cds2044;Parent=gene2105;Dbxref=Genbank:WP_002211264.1;Name=WP_002211264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211264.1;transl_table=11 NC_017265.1 RefSeq gene 2274322 2276433 . - . ID=gene2106;Name=YPC_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10555;old_locus_tag=YPC_2332 NC_017265.1 Protein Homology CDS 2274322 2276433 . - 0 ID=cds2045;Parent=gene2106;Dbxref=Genbank:WP_002224461.1;Name=WP_002224461.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224461.1;transl_table=11 NC_017265.1 RefSeq gene 2277011 2279173 . + . ID=gene2107;Name=YPC_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10560;old_locus_tag=YPC_2333 NC_017265.1 Protein Homology CDS 2277011 2279173 . + 0 ID=cds2046;Parent=gene2107;Dbxref=Genbank:WP_002211266.1;Name=WP_002211266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211266.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2279255 2280574 . + . ID=id192;gbkey=repeat_region NC_017265.1 RefSeq gene 2279293 2280501 . - . ID=gene2108;Name=YPC_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10565;old_locus_tag=YPC_2334 NC_017265.1 Protein Homology CDS 2279293 2280501 . - 0 ID=cds2047;Parent=gene2108;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2280620 2282278 . + . ID=gene2109;Name=YPC_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10570;old_locus_tag=YPC_2335 NC_017265.1 Protein Homology CDS 2280620 2282278 . + 0 ID=cds2048;Parent=gene2109;Dbxref=Genbank:WP_002211267.1;Name=WP_002211267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211267.1;transl_table=11 NC_017265.1 RefSeq gene 2282448 2282912 . + . ID=gene2110;Name=YPC_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10575;old_locus_tag=YPC_2336 NC_017265.1 Protein Homology CDS 2282448 2282912 . + 0 ID=cds2049;Parent=gene2110;Dbxref=Genbank:WP_002211268.1;Name=WP_002211268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211268.1;transl_table=11 NC_017265.1 RefSeq gene 2283073 2284260 . - . ID=gene2111;Name=YPC_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10580;old_locus_tag=YPC_2337 NC_017265.1 Protein Homology CDS 2283073 2284260 . - 0 ID=cds2050;Parent=gene2111;Dbxref=Genbank:WP_002211269.1;Name=WP_002211269.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002211269.1;transl_table=11 NC_017265.1 RefSeq gene 2284257 2284841 . - . ID=gene2112;Name=YPC_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10585;old_locus_tag=YPC_2338 NC_017265.1 Protein Homology CDS 2284257 2284841 . - 0 ID=cds2051;Parent=gene2112;Dbxref=Genbank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11 NC_017265.1 RefSeq gene 2284838 2285992 . - . ID=gene2113;Name=YPC_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10590;old_locus_tag=YPC_2339 NC_017265.1 Protein Homology CDS 2284838 2285992 . - 0 ID=cds2052;Parent=gene2113;Dbxref=Genbank:WP_002214329.1;Name=WP_002214329.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002214329.1;transl_table=11 NC_017265.1 RefSeq gene 2285992 2286954 . - . ID=gene2114;Name=YPC_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10595;old_locus_tag=YPC_2340 NC_017265.1 Protein Homology CDS 2285992 2286954 . - 0 ID=cds2053;Parent=gene2114;Dbxref=Genbank:WP_002211271.1;Name=WP_002211271.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211271.1;transl_table=11 NC_017265.1 RefSeq gene 2287088 2288374 . - . ID=gene2115;Name=YPC_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10600;old_locus_tag=YPC_2342 NC_017265.1 Protein Homology CDS 2287088 2288374 . - 0 ID=cds2054;Parent=gene2115;Dbxref=Genbank:WP_015683641.1;Name=WP_015683641.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_015683641.1;transl_table=11 NC_017265.1 RefSeq gene 2288371 2289177 . - . ID=gene2116;Name=YPC_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10605;old_locus_tag=YPC_2343 NC_017265.1 Protein Homology CDS 2288371 2289177 . - 0 ID=cds2055;Parent=gene2116;Dbxref=Genbank:WP_002214335.1;Name=WP_002214335.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002214335.1;transl_table=11 NC_017265.1 RefSeq gene 2289170 2290186 . - . ID=gene2117;Name=YPC_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10610;old_locus_tag=YPC_2344 NC_017265.1 Protein Homology CDS 2289170 2290186 . - 0 ID=cds2056;Parent=gene2117;Dbxref=Genbank:WP_002211275.1;Name=WP_002211275.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211275.1;transl_table=11 NC_017265.1 RefSeq gene 2290200 2290730 . - . ID=gene2118;Name=YPC_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10615 NC_017265.1 Protein Homology CDS 2290200 2290730 . - 0 ID=cds2057;Parent=gene2118;Dbxref=Genbank:WP_002214337.1;Name=WP_002214337.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002214337.1;transl_table=11 NC_017265.1 RefSeq gene 2290699 2291208 . - . ID=gene2119;Name=YPC_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10620 NC_017265.1 Protein Homology CDS 2290699 2291208 . - 0 ID=cds2058;Parent=gene2119;Dbxref=Genbank:WP_002214339.1;Name=WP_002214339.1;gbkey=CDS;product=thiolase;protein_id=WP_002214339.1;transl_table=11 NC_017265.1 RefSeq gene 2292205 2293809 . + . ID=gene2120;Name=YPC_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10625;old_locus_tag=YPC_2347 NC_017265.1 Protein Homology CDS 2292205 2293809 . + 0 ID=cds2059;Parent=gene2120;Dbxref=Genbank:WP_002211277.1;Name=WP_002211277.1;gbkey=CDS;product=chorismate-binding enzyme domain protein;protein_id=WP_002211277.1;transl_table=11 NC_017265.1 RefSeq gene 2293987 2294559 . - . ID=gene2121;Name=YPC_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10630;old_locus_tag=YPC_2348 NC_017265.1 Protein Homology CDS 2293987 2294559 . - 0 ID=cds2060;Parent=gene2121;Dbxref=Genbank:WP_002211278.1;Name=WP_002211278.1;gbkey=CDS;product=cold inducible protein Ves;protein_id=WP_002211278.1;transl_table=11 NC_017265.1 RefSeq gene 2294559 2295929 . - . ID=gene2122;Name=YPC_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10635;old_locus_tag=YPC_2349 NC_017265.1 Protein Homology CDS 2294559 2295929 . - 0 ID=cds2061;Parent=gene2122;Dbxref=Genbank:WP_002211279.1;Name=WP_002211279.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_002211279.1;transl_table=11 NC_017265.1 RefSeq gene 2296077 2296844 . + . ID=gene2123;Name=YPC_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10640;old_locus_tag=YPC_2350 NC_017265.1 Protein Homology CDS 2296077 2296844 . + 0 ID=cds2062;Parent=gene2123;Dbxref=Genbank:WP_015683642.1;Name=WP_015683642.1;gbkey=CDS;product=histidine utilization repressor;protein_id=WP_015683642.1;transl_table=11 NC_017265.1 RefSeq gene 2297048 2298268 . + . ID=gene2124;Name=YPC_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10645;old_locus_tag=YPC_2351 NC_017265.1 Protein Homology CDS 2297048 2298268 . + 0 ID=cds2063;Parent=gene2124;Dbxref=Genbank:WP_002211281.1;Name=WP_002211281.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_002211281.1;transl_table=11 NC_017265.1 RefSeq gene 2298265 2299071 . + . ID=gene2125;Name=YPC_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10650;old_locus_tag=YPC_2352 NC_017265.1 Protein Homology CDS 2298265 2299071 . + 0 ID=cds2064;Parent=gene2125;Dbxref=Genbank:WP_002211282.1;Name=WP_002211282.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_002211282.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2299548 2301506 . + . ID=id193;gbkey=repeat_region NC_017265.1 RefSeq gene 2299616 2300395 . - . ID=gene2126;Name=YPC_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10655;old_locus_tag=YPC_2354 NC_017265.1 Protein Homology CDS 2299616 2300395 . - 0 ID=cds2065;Parent=gene2126;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 2300395 2301417 . - . ID=gene2127;Name=YPC_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10660;old_locus_tag=YPC_2355 NC_017265.1 Protein Homology CDS 2300395 2301417 . - 0 ID=cds2066;Parent=gene2127;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 2301474 2301701 . + . ID=gene2128;Name=YPC_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10665 NC_017265.1 Protein Homology CDS 2301474 2301701 . + 0 ID=cds2067;Parent=gene2128;Dbxref=Genbank:WP_002215429.1;Name=WP_002215429.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215429.1;transl_table=11 NC_017265.1 RefSeq gene 2301685 2301807 . - . ID=gene2129;Name=YPC_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10670;old_locus_tag=YPC_2356 NC_017265.1 Protein Homology CDS 2301685 2301807 . - 0 ID=cds2068;Parent=gene2129;Dbxref=Genbank:WP_002213181.1;Name=WP_002213181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213181.1;transl_table=11 NC_017265.1 RefSeq gene 2301895 2302080 . + . ID=gene2130;Name=YPC_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10675;old_locus_tag=YPC_2357 NC_017265.1 Protein Homology CDS 2301895 2302080 . + 0 ID=cds2069;Parent=gene2130;Dbxref=Genbank:WP_002215428.1;Name=WP_002215428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215428.1;transl_table=11 NC_017265.1 RefSeq gene 2302096 2302320 . + . ID=gene2131;Name=YPC_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10680;old_locus_tag=YPC_2358 NC_017265.1 Protein Homology CDS 2302096 2302320 . + 0 ID=cds2070;Parent=gene2131;Dbxref=Genbank:WP_002213183.1;Name=WP_002213183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213183.1;transl_table=11 NC_017265.1 RefSeq gene 2302330 2302482 . - . ID=gene2132;Name=YPC_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10685 NC_017265.1 Protein Homology CDS 2302330 2302482 . - 0 ID=cds2071;Parent=gene2132;Dbxref=Genbank:WP_002231175.1;Name=WP_002231175.1;gbkey=CDS;product=sugar ABC transporter ATPase;protein_id=WP_002231175.1;transl_table=11 NC_017265.1 RefSeq gene 2302557 2303447 . - . ID=gene2133;Name=YPC_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10690;old_locus_tag=YPC_2360 NC_017265.1 Protein Homology CDS 2302557 2303447 . - 0 ID=cds2072;Parent=gene2133;Dbxref=Genbank:WP_002215425.1;Name=WP_002215425.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002215425.1;transl_table=11 NC_017265.1 RefSeq gene 2303472 2304299 . - . ID=gene2134;Name=YPC_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10695 NC_017265.1 Protein Homology CDS 2303472 2304299 . - 0 ID=cds2073;Parent=gene2134;Dbxref=Genbank:WP_002213186.1;Name=WP_002213186.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213186.1;transl_table=11 NC_017265.1 RefSeq gene 2304292 2305152 . - . ID=gene2135;Name=YPC_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10700 NC_017265.1 Protein Homology CDS 2304292 2305152 . - 0 ID=cds2074;Parent=gene2135;Dbxref=Genbank:WP_002213188.1;Name=WP_002213188.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NC_017265.1 RefSeq gene 2305219 2306487 . - . ID=gene2136;Name=YPC_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10705;old_locus_tag=YPC_2363 NC_017265.1 Protein Homology CDS 2305219 2306487 . - 0 ID=cds2075;Parent=gene2136;Dbxref=Genbank:WP_002213190.1;Name=WP_002213190.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002213190.1;transl_table=11 NC_017265.1 RefSeq gene 2306517 2307530 . - . ID=gene2137;Name=YPC_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10710;old_locus_tag=YPC_2364 NC_017265.1 Protein Homology CDS 2306517 2307530 . - 0 ID=cds2076;Parent=gene2137;Dbxref=Genbank:WP_002213192.1;Name=WP_002213192.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213192.1;transl_table=11 NC_017265.1 RefSeq gene 2307938 2308222 . + . ID=gene2138;Name=YPC_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10715;old_locus_tag=YPC_2365 NC_017265.1 Protein Homology CDS 2307938 2308222 . + 0 ID=cds2077;Parent=gene2138;Dbxref=Genbank:WP_002228532.1;Name=WP_002228532.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002228532.1;transl_table=11 NC_017265.1 RefSeq gene 2308192 2308989 . - . ID=gene2139;Name=YPC_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10720;old_locus_tag=YPC_2366 NC_017265.1 Protein Homology CDS 2308192 2308989 . - 0 ID=cds2078;Parent=gene2139;Dbxref=Genbank:WP_002213201.1;Name=WP_002213201.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NC_017265.1 RefSeq gene 2309176 2309280 . - . ID=gene2140;Name=YPC_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10725 NC_017265.1 Protein Homology CDS 2309176 2309280 . - 0 ID=cds2079;Parent=gene2140;Dbxref=Genbank:WP_002215419.1;Name=WP_002215419.1;gbkey=CDS;product=transposase;protein_id=WP_002215419.1;transl_table=11 NC_017265.1 RefSeq gene 2309958 2310392 . + . ID=gene2141;Name=YPC_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10730;old_locus_tag=YPC_2370 NC_017265.1 Protein Homology CDS 2309958 2310392 . + 0 ID=cds2080;Parent=gene2141;Dbxref=Genbank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NC_017265.1 RefSeq gene 2310404 2310973 . + . ID=gene2142;Name=YPC_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10735;old_locus_tag=YPC_2371 NC_017265.1 Protein Homology CDS 2310404 2310973 . + 0 ID=cds2081;Parent=gene2142;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NC_017265.1 RefSeq gene 2311391 2312589 . - . ID=gene2143;Name=YPC_RS10740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS10740;pseudo=true NC_017265.1 Protein Homology CDS 2311391 2312589 . - 0 ID=cds2082;Parent=gene2143;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2312637 2313713 . - . ID=gene2144;Name=YPC_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10745;old_locus_tag=YPC_2374 NC_017265.1 Protein Homology CDS 2312637 2313713 . - 0 ID=cds2083;Parent=gene2144;Dbxref=Genbank:WP_002213208.1;Name=WP_002213208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213208.1;transl_table=11 NC_017265.1 RefSeq gene 2313779 2314069 . - . ID=gene2145;Name=YPC_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10750;old_locus_tag=YPC_2375 NC_017265.1 Protein Homology CDS 2313779 2314069 . - 0 ID=cds2084;Parent=gene2145;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11 NC_017265.1 RefSeq gene 2314050 2314322 . - . ID=gene2146;Name=YPC_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10755;old_locus_tag=YPC_2376 NC_017265.1 Protein Homology CDS 2314050 2314322 . - 0 ID=cds2085;Parent=gene2146;Dbxref=Genbank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;product=toxin;protein_id=WP_002213210.1;transl_table=11 NC_017265.1 RefSeq gene 2314458 2314712 . + . ID=gene2147;Name=YPC_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10760 NC_017265.1 Protein Homology CDS 2314458 2314712 . + 0 ID=cds2086;Parent=gene2147;Dbxref=Genbank:WP_002213211.1;Name=WP_002213211.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_002213211.1;transl_table=11 NC_017265.1 RefSeq gene 2314709 2315008 . + . ID=gene2148;Name=YPC_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10765;old_locus_tag=YPC_2378 NC_017265.1 Protein Homology CDS 2314709 2315008 . + 0 ID=cds2087;Parent=gene2148;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11 NC_017265.1 RefSeq gene 2315025 2315312 . + . ID=gene2149;Name=YPC_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10770;old_locus_tag=YPC_2379 NC_017265.1 Protein Homology CDS 2315025 2315312 . + 0 ID=cds2088;Parent=gene2149;Dbxref=Genbank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215413.1;transl_table=11 NC_017265.1 RefSeq gene 2315747 2315962 . + . ID=gene2150;Name=YPC_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10775;old_locus_tag=YPC_2380 NC_017265.1 Protein Homology CDS 2315747 2315962 . + 0 ID=cds2089;Parent=gene2150;Dbxref=Genbank:WP_002215412.1;Name=WP_002215412.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215412.1;transl_table=11 NC_017265.1 RefSeq gene 2315959 2316264 . + . ID=gene2151;Name=YPC_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10780;old_locus_tag=YPC_2381 NC_017265.1 Protein Homology CDS 2315959 2316264 . + 0 ID=cds2090;Parent=gene2151;Dbxref=Genbank:WP_002215411.1;Name=WP_002215411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215411.1;transl_table=11 NC_017265.1 RefSeq gene 2316245 2316523 . + . ID=gene2152;Name=YPC_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10785;old_locus_tag=YPC_2382 NC_017265.1 Protein Homology CDS 2316245 2316523 . + 0 ID=cds2091;Parent=gene2152;Dbxref=Genbank:WP_002215410.1;Name=WP_002215410.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215410.1;transl_table=11 NC_017265.1 RefSeq gene 2316688 2316828 . + . ID=gene2153;Name=YPC_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10790;old_locus_tag=YPC_2383 NC_017265.1 Protein Homology CDS 2316688 2316828 . + 0 ID=cds2092;Parent=gene2153;Dbxref=Genbank:WP_002213214.1;Name=WP_002213214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213214.1;transl_table=11 NC_017265.1 RefSeq gene 2316876 2317358 . + . ID=gene2154;Name=YPC_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10795;old_locus_tag=YPC_2384 NC_017265.1 Protein Homology CDS 2316876 2317358 . + 0 ID=cds2093;Parent=gene2154;Dbxref=Genbank:WP_042468522.1;Name=WP_042468522.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_042468522.1;transl_table=11 NC_017265.1 RefSeq gene 2317430 2318389 . + . ID=gene2155;Name=YPC_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10800;old_locus_tag=YPC_2385 NC_017265.1 Protein Homology CDS 2317430 2318389 . + 0 ID=cds2094;Parent=gene2155;Dbxref=Genbank:WP_002213218.1;Name=WP_002213218.1;gbkey=CDS;product=transposase;protein_id=WP_002213218.1;transl_table=11 NC_017265.1 RefSeq gene 2318609 2318953 . + . ID=gene2156;Name=YPC_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10805;old_locus_tag=YPC_2386 NC_017265.1 Protein Homology CDS 2318609 2318953 . + 0 ID=cds2095;Parent=gene2156;Dbxref=Genbank:WP_002215406.1;Name=WP_002215406.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215406.1;transl_table=11 NC_017265.1 RefSeq gene 2318979 2319194 . + . ID=gene2157;Name=YPC_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10810;old_locus_tag=YPC_2387 NC_017265.1 Protein Homology CDS 2318979 2319194 . + 0 ID=cds2096;Parent=gene2157;Dbxref=Genbank:WP_002230255.1;Name=WP_002230255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230255.1;transl_table=11 NC_017265.1 RefSeq gene 2319224 2319406 . - . ID=gene2158;Name=YPC_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10815 NC_017265.1 Protein Homology CDS 2319224 2319406 . - 0 ID=cds2097;Parent=gene2158;Dbxref=Genbank:WP_002213223.1;Name=WP_002213223.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213223.1;transl_table=11 NC_017265.1 RefSeq gene 2320016 2320138 . - . ID=gene2159;Name=YPC_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10820;old_locus_tag=YPC_2388 NC_017265.1 Protein Homology CDS 2320016 2320138 . - 0 ID=cds2098;Parent=gene2159;Dbxref=Genbank:WP_002213228.1;Name=WP_002213228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213228.1;transl_table=11 NC_017265.1 RefSeq gene 2320531 2320758 . - . ID=gene2160;Name=YPC_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10825;old_locus_tag=YPC_2389 NC_017265.1 Protein Homology CDS 2320531 2320758 . - 0 ID=cds2099;Parent=gene2160;Dbxref=Genbank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002215401.1;transl_table=11 NC_017265.1 RefSeq gene 2320869 2321384 . + . ID=gene2161;Name=YPC_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10830;old_locus_tag=YPC_2390 NC_017265.1 Protein Homology CDS 2320869 2321384 . + 0 ID=cds2100;Parent=gene2161;Dbxref=Genbank:WP_002215399.1;Name=WP_002215399.1;gbkey=CDS;product=integrase;protein_id=WP_002215399.1;transl_table=11 NC_017265.1 RefSeq gene 2321682 2321767 . - . ID=gene2162;Name=YPC_RS10835;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS10835;old_locus_tag=YPC_2392 NC_017265.1 tRNAscan-SE tRNA 2321682 2321767 . - . ID=rna58;Parent=gene2162;anticodon=(pos:complement(2321731..2321733));gbkey=tRNA;product=tRNA-Leu NC_017265.1 tRNAscan-SE exon 2321682 2321767 . - . ID=id194;Parent=rna58;anticodon=(pos:complement(2321731..2321733));gbkey=tRNA;product=tRNA-Leu NC_017265.1 RefSeq gene 2321778 2321851 . - . ID=gene2163;Name=YPC_RS10840;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS10840;old_locus_tag=YPC_2393 NC_017265.1 tRNAscan-SE tRNA 2321778 2321851 . - . ID=rna59;Parent=gene2163;anticodon=(pos:complement(2321817..2321819));gbkey=tRNA;product=tRNA-Cys NC_017265.1 tRNAscan-SE exon 2321778 2321851 . - . ID=id195;Parent=rna59;anticodon=(pos:complement(2321817..2321819));gbkey=tRNA;product=tRNA-Cys NC_017265.1 RefSeq gene 2321904 2321979 . - . ID=gene2164;Name=YPC_RS10845;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS10845;old_locus_tag=YPC_2394 NC_017265.1 tRNAscan-SE tRNA 2321904 2321979 . - . ID=rna60;Parent=gene2164;anticodon=(pos:complement(2321944..2321946));gbkey=tRNA;product=tRNA-Gly NC_017265.1 tRNAscan-SE exon 2321904 2321979 . - . ID=id196;Parent=rna60;anticodon=(pos:complement(2321944..2321946));gbkey=tRNA;product=tRNA-Gly NC_017265.1 RefSeq gene 2322124 2322672 . - . ID=gene2165;Name=YPC_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10850;old_locus_tag=YPC_2395 NC_017265.1 Protein Homology CDS 2322124 2322672 . - 0 ID=cds2101;Parent=gene2165;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NC_017265.1 RefSeq gene 2322731 2324563 . - . ID=gene2166;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YPC_RS10855;old_locus_tag=YPC_2396 NC_017265.1 Protein Homology CDS 2322731 2324563 . - 0 ID=cds2102;Parent=gene2166;Dbxref=Genbank:WP_002220477.1;Name=WP_002220477.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_002220477.1;transl_table=11 NC_017265.1 RefSeq gene 2324556 2325212 . - . ID=gene2167;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=YPC_RS10860;old_locus_tag=YPC_2397 NC_017265.1 Protein Homology CDS 2324556 2325212 . - 0 ID=cds2103;Parent=gene2167;Dbxref=Genbank:WP_002211176.1;Name=WP_002211176.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_002211176.1;transl_table=11 NC_017265.1 RefSeq gene 2325874 2326098 . + . ID=gene2168;Name=YPC_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10865;old_locus_tag=YPC_2398 NC_017265.1 Protein Homology CDS 2325874 2326098 . + 0 ID=cds2104;Parent=gene2168;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11 NC_017265.1 RefSeq gene 2326226 2326567 . + . ID=gene2169;Name=YPC_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10870;old_locus_tag=YPC_2400 NC_017265.1 Protein Homology CDS 2326226 2326567 . + 0 ID=cds2105;Parent=gene2169;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11 NC_017265.1 RefSeq gene 2326595 2326849 . - . ID=gene2170;Name=YPC_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10875;old_locus_tag=YPC_2401 NC_017265.1 Protein Homology CDS 2326595 2326849 . - 0 ID=cds2106;Parent=gene2170;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11 NC_017265.1 RefSeq gene 2326968 2327150 . + . ID=gene2171;Name=YPC_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10880 NC_017265.1 Protein Homology CDS 2326968 2327150 . + 0 ID=cds2107;Parent=gene2171;Dbxref=Genbank:WP_002218407.1;Name=WP_002218407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218407.1;transl_table=11 NC_017265.1 RefSeq gene 2327189 2327740 . - . ID=gene2172;Name=YPC_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10885;old_locus_tag=YPC_2402 NC_017265.1 Protein Homology CDS 2327189 2327740 . - 0 ID=cds2108;Parent=gene2172;Dbxref=Genbank:WP_002211172.1;Name=WP_002211172.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002211172.1;transl_table=11 NC_017265.1 RefSeq gene 2328427 2328502 . - . ID=gene2173;Name=YPC_RS10890;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS10890;old_locus_tag=YPC_2403 NC_017265.1 tRNAscan-SE tRNA 2328427 2328502 . - . ID=rna61;Parent=gene2173;anticodon=(pos:complement(2328467..2328469));gbkey=tRNA;product=tRNA-Lys NC_017265.1 tRNAscan-SE exon 2328427 2328502 . - . ID=id197;Parent=rna61;anticodon=(pos:complement(2328467..2328469));gbkey=tRNA;product=tRNA-Lys NC_017265.1 RefSeq gene 2328855 2330279 . + . ID=gene2174;Name=YPC_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10895;old_locus_tag=YPC_2404 NC_017265.1 Protein Homology CDS 2328855 2330279 . + 0 ID=cds2109;Parent=gene2174;Dbxref=Genbank:WP_015683644.1;Name=WP_015683644.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_015683644.1;transl_table=11 NC_017265.1 RefSeq gene 2330405 2331583 . - . ID=gene2175;Name=YPC_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10900;old_locus_tag=YPC_2405 NC_017265.1 Protein Homology CDS 2330405 2331583 . - 0 ID=cds2110;Parent=gene2175;Dbxref=Genbank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11 NC_017265.1 RefSeq gene 2331977 2332576 . + . ID=gene2176;Name=YPC_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10905;old_locus_tag=YPC_2406 NC_017265.1 Protein Homology CDS 2331977 2332576 . + 0 ID=cds2111;Parent=gene2176;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11 NC_017265.1 RefSeq gene 2332662 2333966 . - . ID=gene2177;Name=YPC_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10910;old_locus_tag=YPC_2407 NC_017265.1 Protein Homology CDS 2332662 2333966 . - 0 ID=cds2112;Parent=gene2177;Dbxref=Genbank:WP_002211167.1;Name=WP_002211167.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_002211167.1;transl_table=11 NC_017265.1 RefSeq gene 2333977 2335107 . - . ID=gene2178;Name=YPC_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10915;old_locus_tag=YPC_2408 NC_017265.1 Protein Homology CDS 2333977 2335107 . - 0 ID=cds2113;Parent=gene2178;Dbxref=Genbank:WP_002211166.1;Name=WP_002211166.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron uptake system component EfeO;protein_id=WP_002211166.1;transl_table=11 NC_017265.1 RefSeq gene 2335137 2335985 . - . ID=gene2179;Name=YPC_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10920;old_locus_tag=YPC_2409 NC_017265.1 Protein Homology CDS 2335137 2335985 . - 0 ID=cds2114;Parent=gene2179;Dbxref=Genbank:WP_002211165.1;Name=WP_002211165.1;gbkey=CDS;product=ferrous iron permease EfeU;protein_id=WP_002211165.1;transl_table=11 NC_017265.1 RefSeq gene 2336318 2337802 . - . ID=gene2180;Name=YPC_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10925;old_locus_tag=YPC_2410 NC_017265.1 Protein Homology CDS 2336318 2337802 . - 0 ID=cds2115;Parent=gene2180;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11 NC_017265.1 RefSeq gene 2337832 2338029 . - . ID=gene2181;Name=YPC_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10930;old_locus_tag=YPC_2411 NC_017265.1 Protein Homology CDS 2337832 2338029 . - 0 ID=cds2116;Parent=gene2181;Dbxref=Genbank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211163.1;transl_table=11 NC_017265.1 RefSeq gene 2338374 2342345 . + . ID=gene2182;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YPC_RS10935;old_locus_tag=YPC_2412 NC_017265.1 Protein Homology CDS 2338374 2342345 . + 0 ID=cds2117;Parent=gene2182;Dbxref=Genbank:WP_015683645.1;Name=WP_015683645.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=WP_015683645.1;transl_table=11 NC_017265.1 RefSeq gene 2342851 2343144 . + . ID=gene2183;Name=YPC_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10940;old_locus_tag=YPC_2413 NC_017265.1 Protein Homology CDS 2342851 2343144 . + 0 ID=cds2118;Parent=gene2183;Dbxref=Genbank:WP_002211161.1;Name=WP_002211161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211161.1;transl_table=11 NC_017265.1 RefSeq gene 2343144 2343515 . + . ID=gene2184;Name=YPC_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10945;old_locus_tag=YPC_2414 NC_017265.1 Protein Homology CDS 2343144 2343515 . + 0 ID=cds2119;Parent=gene2184;Dbxref=Genbank:WP_002223875.1;Name=WP_002223875.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002223875.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2343651 2343819 . + . ID=id198;gbkey=repeat_region NC_017265.1 RefSeq gene 2343807 2344568 . - . ID=gene2185;Name=YPC_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10950;old_locus_tag=YPC_2416 NC_017265.1 Protein Homology CDS 2343807 2344568 . - 0 ID=cds2120;Parent=gene2185;Dbxref=Genbank:WP_002211159.1;Name=WP_002211159.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211159.1;transl_table=11 NC_017265.1 RefSeq gene 2344571 2345233 . - . ID=gene2186;Name=YPC_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10955;old_locus_tag=YPC_2417 NC_017265.1 Protein Homology CDS 2344571 2345233 . - 0 ID=cds2121;Parent=gene2186;Dbxref=Genbank:WP_002211158.1;Name=WP_002211158.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002211158.1;transl_table=11 NC_017265.1 RefSeq gene 2345233 2346033 . - . ID=gene2187;Name=YPC_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10960;old_locus_tag=YPC_2418 NC_017265.1 Protein Homology CDS 2345233 2346033 . - 0 ID=cds2122;Parent=gene2187;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11 NC_017265.1 RefSeq gene 2346157 2347149 . - . ID=gene2188;Name=YPC_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10965;old_locus_tag=YPC_2419 NC_017265.1 Protein Homology CDS 2346157 2347149 . - 0 ID=cds2123;Parent=gene2188;Dbxref=Genbank:WP_002227959.1;Name=WP_002227959.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_002227959.1;transl_table=11 NC_017265.1 RefSeq gene 2347438 2347947 . - . ID=gene2189;Name=YPC_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10970;old_locus_tag=YPC_2420 NC_017265.1 Protein Homology CDS 2347438 2347947 . - 0 ID=cds2124;Parent=gene2189;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11 NC_017265.1 RefSeq gene 2348169 2348891 . - . ID=gene2190;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=YPC_RS10975;old_locus_tag=YPC_2422 NC_017265.1 Protein Homology CDS 2348169 2348891 . - 0 ID=cds2125;Parent=gene2190;Dbxref=Genbank:WP_002211153.1;Name=WP_002211153.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_002211153.1;transl_table=11 NC_017265.1 RefSeq gene 2349238 2350347 . - . ID=gene2191;Name=YPC_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10980;old_locus_tag=YPC_2424 NC_017265.1 Protein Homology CDS 2349238 2350347 . - 0 ID=cds2126;Parent=gene2191;Dbxref=Genbank:WP_002211152.1;Name=WP_002211152.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002211152.1;transl_table=11 NC_017265.1 RefSeq gene 2350644 2352044 . + . ID=gene2192;Name=YPC_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10985;old_locus_tag=YPC_2425 NC_017265.1 Protein Homology CDS 2350644 2352044 . + 0 ID=cds2127;Parent=gene2192;Dbxref=Genbank:WP_002211150.1;Name=WP_002211150.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_002211150.1;transl_table=11 NC_017265.1 RefSeq gene 2352055 2352453 . + . ID=gene2193;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPC_RS10990;old_locus_tag=YPC_2426 NC_017265.1 Protein Homology CDS 2352055 2352453 . + 0 ID=cds2128;Parent=gene2193;Dbxref=Genbank:WP_002211149.1;Name=WP_002211149.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_002211149.1;transl_table=11 NC_017265.1 RefSeq gene 2352464 2352826 . + . ID=gene2194;Name=YPC_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS10995;old_locus_tag=YPC_2427 NC_017265.1 Protein Homology CDS 2352464 2352826 . + 0 ID=cds2129;Parent=gene2194;Dbxref=Genbank:WP_002211148.1;Name=WP_002211148.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_002211148.1;transl_table=11 NC_017265.1 RefSeq gene 2352881 2353120 . + . ID=gene2195;Name=YPC_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11000 NC_017265.1 Protein Homology CDS 2352881 2353120 . + 0 ID=cds2130;Parent=gene2195;Dbxref=Genbank:WP_002215994.1;Name=WP_002215994.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215994.1;transl_table=11 NC_017265.1 RefSeq gene 2353127 2354002 . + . ID=gene2196;Name=YPC_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11005;old_locus_tag=YPC_2428 NC_017265.1 Protein Homology CDS 2353127 2354002 . + 0 ID=cds2131;Parent=gene2196;Dbxref=Genbank:WP_002211147.1;Name=WP_002211147.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NC_017265.1 RefSeq gene 2354356 2356270 . + . ID=gene2197;Name=YPC_RS11010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11010;pseudo=true NC_017265.1 Protein Homology CDS 2354356 2356270 . + 0 ID=cds2132;Parent=gene2197;exception=annotated by transcript or proteomic data;gbkey=CDS;product=histidine kinase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2356407 2357312 . + . ID=gene2198;Name=YPC_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11015;old_locus_tag=YPC_2431 NC_017265.1 Protein Homology CDS 2356407 2357312 . + 0 ID=cds2133;Parent=gene2198;Dbxref=Genbank:WP_002228542.1;Name=WP_002228542.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002228542.1;transl_table=11 NC_017265.1 RefSeq gene 2357473 2358084 . + . ID=gene2199;Name=YPC_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11020;old_locus_tag=YPC_2432 NC_017265.1 Protein Homology CDS 2357473 2358084 . + 0 ID=cds2134;Parent=gene2199;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11 NC_017265.1 RefSeq gene 2358270 2358746 . - . ID=gene2200;Name=YPC_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11025;old_locus_tag=YPC_2433 NC_017265.1 Protein Homology CDS 2358270 2358746 . - 0 ID=cds2135;Parent=gene2200;Dbxref=Genbank:WP_002215992.1;Name=WP_002215992.1;gbkey=CDS;product=death-on-curing family protein;protein_id=WP_002215992.1;transl_table=11 NC_017265.1 RefSeq gene 2358757 2358936 . - . ID=gene2201;Name=YPC_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11030 NC_017265.1 Protein Homology CDS 2358757 2358936 . - 0 ID=cds2136;Parent=gene2201;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NC_017265.1 RefSeq gene 2359356 2359667 . - . ID=gene2202;Name=YPC_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11035;old_locus_tag=YPC_2435 NC_017265.1 Protein Homology CDS 2359356 2359667 . - 0 ID=cds2137;Parent=gene2202;Dbxref=Genbank:WP_002211144.1;Name=WP_002211144.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NC_017265.1 RefSeq gene 2360020 2361732 . + . ID=gene2203;Name=YPC_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11040;old_locus_tag=YPC_2436 NC_017265.1 Protein Homology CDS 2360020 2361732 . + 0 ID=cds2138;Parent=gene2203;Dbxref=Genbank:WP_002211143.1;Name=WP_002211143.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_002211143.1;transl_table=11 NC_017265.1 RefSeq gene 2361729 2362721 . + . ID=gene2204;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPC_RS11045;old_locus_tag=YPC_2437 NC_017265.1 Protein Homology CDS 2361729 2362721 . + 0 ID=cds2139;Parent=gene2204;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NC_017265.1 RefSeq gene 2362714 2363430 . + . ID=gene2205;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPC_RS11050;old_locus_tag=YPC_2438 NC_017265.1 Protein Homology CDS 2362714 2363430 . + 0 ID=cds2140;Parent=gene2205;Dbxref=Genbank:WP_002211141.1;Name=WP_002211141.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_002211141.1;transl_table=11 NC_017265.1 RefSeq gene 2363393 2364847 . + . ID=gene2206;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPC_RS11055;old_locus_tag=YPC_2439 NC_017265.1 Protein Homology CDS 2363393 2364847 . + 0 ID=cds2141;Parent=gene2206;Dbxref=Genbank:WP_002211140.1;Name=WP_002211140.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=WP_002211140.1;transl_table=11 NC_017265.1 RefSeq gene 2364947 2365393 . + . ID=gene2207;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPC_RS11060;old_locus_tag=YPC_2440 NC_017265.1 Protein Homology CDS 2364947 2365393 . + 0 ID=cds2142;Parent=gene2207;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11 NC_017265.1 RefSeq gene 2365390 2366742 . + . ID=gene2208;Name=YPC_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11065;old_locus_tag=YPC_2441 NC_017265.1 Protein Homology CDS 2365390 2366742 . + 0 ID=cds2143;Parent=gene2208;Dbxref=Genbank:WP_002211138.1;Name=WP_002211138.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_002211138.1;transl_table=11 NC_017265.1 RefSeq gene 2367009 2367479 . + . ID=gene2209;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YPC_RS11070;old_locus_tag=YPC_2443 NC_017265.1 Protein Homology CDS 2367009 2367479 . + 0 ID=cds2144;Parent=gene2209;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11 NC_017265.1 RefSeq gene 2367485 2368486 . + . ID=gene2210;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YPC_RS11075;old_locus_tag=YPC_2444 NC_017265.1 Protein Homology CDS 2367485 2368486 . + 0 ID=cds2145;Parent=gene2210;Dbxref=Genbank:WP_002211135.1;Name=WP_002211135.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11 NC_017265.1 RefSeq gene 2368483 2368899 . + . ID=gene2211;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPC_RS11080;old_locus_tag=YPC_2445 NC_017265.1 Protein Homology CDS 2368483 2368899 . + 0 ID=cds2146;Parent=gene2211;Dbxref=Genbank:WP_002211134.1;Name=WP_002211134.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_002211134.1;transl_table=11 NC_017265.1 RefSeq gene 2368899 2369435 . + . ID=gene2212;Name=YPC_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11085;old_locus_tag=YPC_2446 NC_017265.1 Protein Homology CDS 2368899 2369435 . + 0 ID=cds2147;Parent=gene2212;Dbxref=Genbank:WP_002211133.1;Name=WP_002211133.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_002211133.1;transl_table=11 NC_017265.1 RefSeq gene 2369516 2370256 . + . ID=gene2213;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPC_RS11090;old_locus_tag=YPC_2447 NC_017265.1 Protein Homology CDS 2369516 2370256 . + 0 ID=cds2148;Parent=gene2213;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11 NC_017265.1 RefSeq gene 2370362 2370631 . + . ID=gene2214;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YPC_RS11095;old_locus_tag=YPC_2448 NC_017265.1 Protein Homology CDS 2370362 2370631 . + 0 ID=cds2149;Parent=gene2214;Dbxref=Genbank:WP_002211131.1;Name=WP_002211131.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NC_017265.1 RefSeq gene 2370634 2371416 . + . ID=gene2215;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YPC_RS11100;old_locus_tag=YPC_2449 NC_017265.1 Protein Homology CDS 2370634 2371416 . + 0 ID=cds2150;Parent=gene2215;Dbxref=Genbank:WP_002211130.1;Name=WP_002211130.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_002211130.1;transl_table=11 NC_017265.1 RefSeq gene 2371623 2371805 . + . ID=gene2216;Name=YPC_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11105 NC_017265.1 Protein Homology CDS 2371623 2371805 . + 0 ID=cds2151;Parent=gene2216;Dbxref=Genbank:WP_002214976.1;Name=WP_002214976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214976.1;transl_table=11 NC_017265.1 RefSeq gene 2371850 2372269 . + . ID=gene2217;Name=YPC_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11110;old_locus_tag=YPC_2451 NC_017265.1 Protein Homology CDS 2371850 2372269 . + 0 ID=cds2152;Parent=gene2217;Dbxref=Genbank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211129.1;transl_table=11 NC_017265.1 RefSeq gene 2372527 2373486 . - . ID=gene2218;Name=YPC_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11115;old_locus_tag=YPC_2452 NC_017265.1 Protein Homology CDS 2372527 2373486 . - 0 ID=cds2153;Parent=gene2218;Dbxref=Genbank:WP_002223882.1;Name=WP_002223882.1;gbkey=CDS;product=kinase pfkB family;protein_id=WP_002223882.1;transl_table=11 NC_017265.1 RefSeq gene 2373535 2374556 . - . ID=gene2219;Name=YPC_RS11120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11120;pseudo=true NC_017265.1 Protein Homology CDS 2373535 2374556 . - 0 ID=cds2154;Parent=gene2219;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter permease;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2374559 2376136 . - . ID=gene2220;Name=YPC_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11125;old_locus_tag=YPC_2455 NC_017265.1 Protein Homology CDS 2374559 2376136 . - 0 ID=cds2155;Parent=gene2220;Dbxref=Genbank:WP_002211126.1;Name=WP_002211126.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002211126.1;transl_table=11 NC_017265.1 RefSeq gene 2376202 2377197 . - . ID=gene2221;Name=YPC_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11130;old_locus_tag=YPC_2456 NC_017265.1 Protein Homology CDS 2376202 2377197 . - 0 ID=cds2156;Parent=gene2221;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11 NC_017265.1 RefSeq gene 2377240 2378319 . - . ID=gene2222;Name=YPC_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11135;old_locus_tag=YPC_2458 NC_017265.1 Protein Homology CDS 2377240 2378319 . - 0 ID=cds2157;Parent=gene2222;Dbxref=Genbank:WP_002211124.1;Name=WP_002211124.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211124.1;transl_table=11 NC_017265.1 RefSeq gene 2378449 2380515 . - . ID=gene2223;Name=YPC_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11140;old_locus_tag=YPC_2459 NC_017265.1 Protein Homology CDS 2378449 2380515 . - 0 ID=cds2158;Parent=gene2223;Dbxref=Genbank:WP_002211122.1;Name=WP_002211122.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002211122.1;transl_table=11 NC_017265.1 RefSeq gene 2380733 2381734 . + . ID=gene2224;Name=YPC_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11145;old_locus_tag=YPC_2460 NC_017265.1 Protein Homology CDS 2380733 2381734 . + 0 ID=cds2159;Parent=gene2224;Dbxref=Genbank:WP_002211121.1;Name=WP_002211121.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NC_017265.1 RefSeq gene 2381763 2382743 . - . ID=gene2225;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPC_RS11150;old_locus_tag=YPC_2461 NC_017265.1 Protein Homology CDS 2381763 2382743 . - 0 ID=cds2160;Parent=gene2225;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NC_017265.1 RefSeq gene 2382882 2384546 . - . ID=gene2226;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPC_RS11155;old_locus_tag=YPC_2462 NC_017265.1 Protein Homology CDS 2382882 2384546 . - 0 ID=cds2161;Parent=gene2226;Dbxref=Genbank:WP_015683650.1;Name=WP_015683650.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_015683650.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2384714 2385408 . + . ID=id199;gbkey=repeat_region NC_017265.1 RefSeq gene 2385417 2386361 . - . ID=gene2227;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPC_RS11160;old_locus_tag=YPC_2467 NC_017265.1 Protein Homology CDS 2385417 2386361 . - 0 ID=cds2162;Parent=gene2227;Dbxref=Genbank:WP_002211118.1;Name=WP_002211118.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_002211118.1;transl_table=11 NC_017265.1 RefSeq gene 2386361 2387470 . - . ID=gene2228;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=YPC_RS11165;old_locus_tag=YPC_2468 NC_017265.1 Protein Homology CDS 2386361 2387470 . - 0 ID=cds2163;Parent=gene2228;Dbxref=Genbank:WP_002228547.1;Name=WP_002228547.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=WP_002228547.1;transl_table=11 NC_017265.1 RefSeq gene 2387485 2388216 . - . ID=gene2229;Name=YPC_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11170;old_locus_tag=YPC_2469 NC_017265.1 Protein Homology CDS 2387485 2388216 . - 0 ID=cds2164;Parent=gene2229;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11 NC_017265.1 RefSeq gene 2388318 2389043 . - . ID=gene2230;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=YPC_RS11175;old_locus_tag=YPC_2470;pseudo=true NC_017265.1 Protein Homology CDS 2388318 2389043 . - 0 ID=cds2165;Parent=gene2230;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar biosynthesis protein FlgG;pseudo=true;transl_except=(pos:complement(2389029..2389031)%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 2388997 2389626 . - . ID=gene2231;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=YPC_RS11180;old_locus_tag=YPC_2471 NC_017265.1 Protein Homology CDS 2388997 2389626 . - 0 ID=cds2166;Parent=gene2231;Dbxref=Genbank:WP_002211114.1;Name=WP_002211114.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_002211114.1;transl_table=11 NC_017265.1 RefSeq gene 2389648 2390934 . - . ID=gene2232;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPC_RS11185;old_locus_tag=YPC_2472 NC_017265.1 Protein Homology CDS 2389648 2390934 . - 0 ID=cds2167;Parent=gene2232;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NC_017265.1 RefSeq gene 2391136 2391813 . - . ID=gene2233;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPC_RS11190;old_locus_tag=YPC_2473 NC_017265.1 Protein Homology CDS 2391136 2391813 . - 0 ID=cds2168;Parent=gene2233;Dbxref=Genbank:WP_002211112.1;Name=WP_002211112.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_002211112.1;transl_table=11 NC_017265.1 RefSeq gene 2391828 2392232 . - . ID=gene2234;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPC_RS11195;old_locus_tag=YPC_2474 NC_017265.1 Protein Homology CDS 2391828 2392232 . - 0 ID=cds2169;Parent=gene2234;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NC_017265.1 RefSeq gene 2392238 2392651 . - . ID=gene2235;Name=YPC_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11200;old_locus_tag=YPC_2475 NC_017265.1 Protein Homology CDS 2392238 2392651 . - 0 ID=cds2170;Parent=gene2235;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11 NC_017265.1 RefSeq gene 2392890 2393588 . + . ID=gene2236;Name=YPC_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11205;old_locus_tag=YPC_2476 NC_017265.1 Protein Homology CDS 2392890 2393588 . + 0 ID=cds2171;Parent=gene2236;Dbxref=Genbank:WP_002227966.1;Name=WP_002227966.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002227966.1;transl_table=11 NC_017265.1 RefSeq gene 2393739 2394041 . + . ID=gene2237;Name=YPC_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11210;old_locus_tag=YPC_2477 NC_017265.1 Protein Homology CDS 2393739 2394041 . + 0 ID=cds2172;Parent=gene2237;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11 NC_017265.1 RefSeq gene 2394060 2394500 . + . ID=gene2238;Name=YPC_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11215;old_locus_tag=YPC_2478 NC_017265.1 Protein Homology CDS 2394060 2394500 . + 0 ID=cds2173;Parent=gene2238;Dbxref=Genbank:WP_002211107.1;Name=WP_002211107.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagellar synthesis protein FlgN;protein_id=WP_002211107.1;transl_table=11 NC_017265.1 RefSeq gene 2394690 2396762 . - . ID=gene2239;Name=YPC_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11220 NC_017265.1 Protein Homology CDS 2394690 2396762 . - 0 ID=cds2174;Parent=gene2239;Dbxref=Genbank:WP_002211106.1;Name=WP_002211106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211106.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2396739 2397460 . + . ID=id200;gbkey=repeat_region NC_017265.1 RefSeq gene 2396852 2397310 . - . ID=gene2240;Name=YPC_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11225 NC_017265.1 Protein Homology CDS 2396852 2397310 . - 0 ID=cds2175;Parent=gene2240;Dbxref=Genbank:WP_042468533.1;Name=WP_042468533.1;gbkey=CDS;product=transposase;protein_id=WP_042468533.1;transl_table=11 NC_017265.1 RefSeq gene 2397300 2398226 . - . ID=gene2241;Name=YPC_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11230 NC_017265.1 Protein Homology CDS 2397300 2398226 . - 0 ID=cds2176;Parent=gene2241;Dbxref=Genbank:WP_002216628.1;Name=WP_002216628.1;gbkey=CDS;product=invasin;protein_id=WP_002216628.1;transl_table=11 NC_017265.1 RefSeq gene 2398968 2399390 . - . ID=gene2242;Name=YPC_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11235;old_locus_tag=YPC_2483 NC_017265.1 Protein Homology CDS 2398968 2399390 . - 0 ID=cds2177;Parent=gene2242;Dbxref=Genbank:WP_002211101.1;Name=WP_002211101.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_002211101.1;transl_table=11 NC_017265.1 RefSeq gene 2399390 2401469 . - . ID=gene2243;Name=YPC_RS11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11240;pseudo=true NC_017265.1 Protein Homology CDS 2399390 2401469 . - 0 ID=cds2178;Parent=gene2243;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2401469 2402628 . - . ID=gene2244;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=pseudogene;locus_tag=YPC_RS11245;pseudo=true NC_017265.1 Protein Homology CDS 2401469 2402628 . - 0 ID=cds2179;Parent=gene2244;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2403160 2403618 . + . ID=gene2245;Name=YPC_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11250;old_locus_tag=YPC_2488 NC_017265.1 Protein Homology CDS 2403160 2403618 . + 0 ID=cds2180;Parent=gene2245;Dbxref=Genbank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211098.1;transl_table=11 NC_017265.1 RefSeq gene 2403612 2403938 . + . ID=gene2246;Name=YPC_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11255;old_locus_tag=YPC_2489 NC_017265.1 Protein Homology CDS 2403612 2403938 . + 0 ID=cds2181;Parent=gene2246;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11 NC_017265.1 RefSeq gene 2403951 2404181 . - . ID=gene2247;Name=YPC_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11260 NC_017265.1 Protein Homology CDS 2403951 2404181 . - 0 ID=cds2182;Parent=gene2247;Dbxref=Genbank:WP_002218131.1;Name=WP_002218131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218131.1;transl_table=11 NC_017265.1 RefSeq gene 2404461 2404802 . - . ID=gene2248;Name=YPC_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11265;old_locus_tag=YPC_2492 NC_017265.1 Protein Homology CDS 2404461 2404802 . - 0 ID=cds2183;Parent=gene2248;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11 NC_017265.1 RefSeq gene 2404899 2405783 . - . ID=gene2249;Name=YPC_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11270;old_locus_tag=YPC_2493 NC_017265.1 Protein Homology CDS 2404899 2405783 . - 0 ID=cds2184;Parent=gene2249;Dbxref=Genbank:WP_002211094.1;Name=WP_002211094.1;gbkey=CDS;product=copper resistance protein D;protein_id=WP_002211094.1;transl_table=11 NC_017265.1 RefSeq gene 2405786 2406172 . - . ID=gene2250;Name=YPC_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11275;old_locus_tag=YPC_2494 NC_017265.1 Protein Homology CDS 2405786 2406172 . - 0 ID=cds2185;Parent=gene2250;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11 NC_017265.1 RefSeq gene 2406569 2407078 . - . ID=gene2251;Name=YPC_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11280;old_locus_tag=YPC_2495 NC_017265.1 Protein Homology CDS 2406569 2407078 . - 0 ID=cds2186;Parent=gene2251;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11 NC_017265.1 RefSeq gene 2407479 2407709 . + . ID=gene2252;Name=YPC_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11285;old_locus_tag=YPC_2497 NC_017265.1 Protein Homology CDS 2407479 2407709 . + 0 ID=cds2187;Parent=gene2252;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NC_017265.1 RefSeq gene 2407769 2408720 . - . ID=gene2253;Name=YPC_RS11290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11290;pseudo=true NC_017265.1 Protein Homology CDS 2407769 2408720 . - 0 ID=cds2188;Parent=gene2253;exception=annotated by transcript or proteomic data;gbkey=CDS;product=proline iminopeptidase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2409442 2411493 . - . ID=gene2254;Name=YPC_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11295;old_locus_tag=YPC_2501 NC_017265.1 Protein Homology CDS 2409442 2411493 . - 0 ID=cds2189;Parent=gene2254;Dbxref=Genbank:WP_002211088.1;Name=WP_002211088.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=oligopeptidase B;protein_id=WP_002211088.1;transl_table=11 NC_017265.1 RefSeq gene 2411803 2412228 . - . ID=gene2255;Name=YPC_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11300;old_locus_tag=YPC_2502 NC_017265.1 Protein Homology CDS 2411803 2412228 . - 0 ID=cds2190;Parent=gene2255;Dbxref=Genbank:WP_002211087.1;Name=WP_002211087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211087.1;transl_table=11 NC_017265.1 RefSeq gene 2412320 2412628 . - . ID=gene2256;Name=YPC_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11305;old_locus_tag=YPC_2503 NC_017265.1 Protein Homology CDS 2412320 2412628 . - 0 ID=cds2191;Parent=gene2256;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11 NC_017265.1 RefSeq gene 2412668 2412988 . - . ID=gene2257;Name=YPC_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11310;old_locus_tag=YPC_2504 NC_017265.1 Protein Homology CDS 2412668 2412988 . - 0 ID=cds2192;Parent=gene2257;Dbxref=Genbank:WP_002211085.1;Name=WP_002211085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211085.1;transl_table=11 NC_017265.1 RefSeq gene 2413082 2414464 . - . ID=gene2258;Name=YPC_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11315;old_locus_tag=YPC_2505 NC_017265.1 Protein Homology CDS 2413082 2414464 . - 0 ID=cds2193;Parent=gene2258;Dbxref=Genbank:WP_002211084.1;Name=WP_002211084.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_002211084.1;transl_table=11 NC_017265.1 RefSeq gene 2414777 2415958 . + . ID=gene2259;Name=YPC_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11320;old_locus_tag=YPC_2506 NC_017265.1 Protein Homology CDS 2414777 2415958 . + 0 ID=cds2194;Parent=gene2259;Dbxref=Genbank:WP_002211083.1;Name=WP_002211083.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_002211083.1;transl_table=11 NC_017265.1 RefSeq gene 2416084 2416341 . - . ID=gene2260;Name=YPC_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11325;old_locus_tag=YPC_2507 NC_017265.1 Protein Homology CDS 2416084 2416341 . - 0 ID=cds2195;Parent=gene2260;Dbxref=Genbank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211082.1;transl_table=11 NC_017265.1 RefSeq gene 2416506 2417882 . + . ID=gene2261;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YPC_RS11330;old_locus_tag=YPC_2508 NC_017265.1 Protein Homology CDS 2416506 2417882 . + 0 ID=cds2196;Parent=gene2261;Dbxref=Genbank:WP_002211081.1;Name=WP_002211081.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase subunit I;protein_id=WP_002211081.1;transl_table=11 NC_017265.1 RefSeq gene 2417879 2418478 . + . ID=gene2262;Name=YPC_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11335;old_locus_tag=YPC_2509 NC_017265.1 Protein Homology CDS 2417879 2418478 . + 0 ID=cds2197;Parent=gene2262;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11 NC_017265.1 RefSeq gene 2419186 2420550 . + . ID=gene2263;Name=YPC_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11340;old_locus_tag=YPC_2510 NC_017265.1 Protein Homology CDS 2419186 2420550 . + 0 ID=cds2198;Parent=gene2263;Dbxref=Genbank:WP_002211079.1;Name=WP_002211079.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_002211079.1;transl_table=11 NC_017265.1 RefSeq gene 2420830 2421327 . - . ID=gene2264;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YPC_RS11345;old_locus_tag=YPC_2511 NC_017265.1 Protein Homology CDS 2420830 2421327 . - 0 ID=cds2199;Parent=gene2264;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11 NC_017265.1 RefSeq gene 2421348 2422910 . - . ID=gene2265;Name=YPC_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11350;old_locus_tag=YPC_2512 NC_017265.1 Protein Homology CDS 2421348 2422910 . - 0 ID=cds2200;Parent=gene2265;Dbxref=Genbank:WP_002211077.1;Name=WP_002211077.1;gbkey=CDS;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211077.1;transl_table=11 NC_017265.1 RefSeq gene 2422978 2424346 . - . ID=gene2266;Name=YPC_RS11355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11355;pseudo=true NC_017265.1 Protein Homology CDS 2422978 2424346 . - 0 ID=cds2201;Parent=gene2266;exception=annotated by transcript or proteomic data;gbkey=CDS;product=4-hydroxyphenylacetate permease;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2424372 2425178 . - . ID=gene2267;Name=YPC_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11360;old_locus_tag=YPC_2515 NC_017265.1 Protein Homology CDS 2424372 2425178 . - 0 ID=cds2202;Parent=gene2267;Dbxref=Genbank:WP_002211075.1;Name=WP_002211075.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002211075.1;transl_table=11 NC_017265.1 RefSeq gene 2425189 2425992 . - . ID=gene2268;Name=YPC_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11365;old_locus_tag=YPC_2516 NC_017265.1 Protein Homology CDS 2425189 2425992 . - 0 ID=cds2203;Parent=gene2268;Dbxref=Genbank:WP_002211074.1;Name=WP_002211074.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_002211074.1;transl_table=11 NC_017265.1 RefSeq gene 2425986 2426384 . - . ID=gene2269;Name=YPC_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11370;old_locus_tag=YPC_2517 NC_017265.1 Protein Homology CDS 2425986 2426384 . - 0 ID=cds2204;Parent=gene2269;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11 NC_017265.1 RefSeq gene 2426409 2427266 . - . ID=gene2270;Name=YPC_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11375;old_locus_tag=YPC_2518 NC_017265.1 Protein Homology CDS 2426409 2427266 . - 0 ID=cds2205;Parent=gene2270;Dbxref=Genbank:WP_002211072.1;Name=WP_002211072.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11 NC_017265.1 RefSeq gene 2427399 2428781 . - . ID=gene2271;Name=YPC_RS11380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11380;old_locus_tag=YPC_2519;partial=true;pseudo=true;start_range=.,2427399 NC_017265.1 Protein Homology CDS 2427399 2428781 . - 0 ID=cds2206;Parent=gene2271;Note=catalyzes the formation of betaine from betaine aldehyde;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=betaine-aldehyde dehydrogenase;pseudo=true;start_range=.,2427399;transl_table=11 NC_017265.1 RefSeq gene 2428778 2429548 . - . ID=gene2272;Name=YPC_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11385;old_locus_tag=YPC_2520 NC_017265.1 Protein Homology CDS 2428778 2429548 . - 0 ID=cds2207;Parent=gene2272;Dbxref=Genbank:WP_002228551.1;Name=WP_002228551.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002228551.1;transl_table=11 NC_017265.1 RefSeq gene 2429545 2430177 . - . ID=gene2273;Name=YPC_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11390;old_locus_tag=YPC_2521 NC_017265.1 Protein Homology CDS 2429545 2430177 . - 0 ID=cds2208;Parent=gene2273;Dbxref=Genbank:WP_015683656.1;Name=WP_015683656.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_015683656.1;transl_table=11 NC_017265.1 RefSeq gene 2430561 2431028 . + . ID=gene2274;Name=YPC_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11395;old_locus_tag=YPC_2522 NC_017265.1 Protein Homology CDS 2430561 2431028 . + 0 ID=cds2209;Parent=gene2274;Dbxref=Genbank:WP_002211070.1;Name=WP_002211070.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_002211070.1;transl_table=11 NC_017265.1 RefSeq gene 2431130 2432506 . - . ID=gene2275;Name=YPC_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11400;old_locus_tag=YPC_2523 NC_017265.1 Protein Homology CDS 2431130 2432506 . - 0 ID=cds2210;Parent=gene2275;Dbxref=Genbank:WP_002358805.1;Name=WP_002358805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002358805.1;transl_table=11 NC_017265.1 RefSeq gene 2433294 2434268 . + . ID=gene2276;Name=YPC_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11405;old_locus_tag=YPC_2524 NC_017265.1 Protein Homology CDS 2433294 2434268 . + 0 ID=cds2211;Parent=gene2276;Dbxref=Genbank:WP_002211069.1;Name=WP_002211069.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NC_017265.1 RefSeq gene 2434360 2435157 . + . ID=gene2277;Name=YPC_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11410;old_locus_tag=YPC_2525 NC_017265.1 Protein Homology CDS 2434360 2435157 . + 0 ID=cds2212;Parent=gene2277;Dbxref=Genbank:WP_002211068.1;Name=WP_002211068.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NC_017265.1 RefSeq gene 2435173 2436051 . + . ID=gene2278;Name=YPC_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11415;old_locus_tag=YPC_2526 NC_017265.1 Protein Homology CDS 2435173 2436051 . + 0 ID=cds2213;Parent=gene2278;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NC_017265.1 RefSeq gene 2436251 2436712 . + . ID=gene2279;Name=YPC_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11420;old_locus_tag=YPC_2527 NC_017265.1 Protein Homology CDS 2436251 2436712 . + 0 ID=cds2214;Parent=gene2279;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11 NC_017265.1 RefSeq gene 2437141 2437710 . + . ID=gene2280;Name=YPC_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11425;old_locus_tag=YPC_2528 NC_017265.1 Protein Homology CDS 2437141 2437710 . + 0 ID=cds2215;Parent=gene2280;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11 NC_017265.1 RefSeq gene 2437871 2440084 . - . ID=gene2281;Name=YPC_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11430;old_locus_tag=YPC_2529 NC_017265.1 Protein Homology CDS 2437871 2440084 . - 0 ID=cds2216;Parent=gene2281;Dbxref=Genbank:WP_002211064.1;Name=WP_002211064.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211064.1;transl_table=11 NC_017265.1 RefSeq gene 2440506 2442588 . + . ID=gene2282;Name=YPC_RS11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11435;pseudo=true NC_017265.1 Protein Homology CDS 2440506 2442588 . + 0 ID=cds2217;Parent=gene2282;exception=annotated by transcript or proteomic data;gbkey=CDS;product=diguanylate cyclase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2442810 2443088 . + . ID=gene2283;Name=YPC_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11440;old_locus_tag=YPC_2532 NC_017265.1 Protein Homology CDS 2442810 2443088 . + 0 ID=cds2218;Parent=gene2283;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NC_017265.1 RefSeq gene 2443310 2444149 . - . ID=gene2284;Name=YPC_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11445;old_locus_tag=YPC_2533 NC_017265.1 Protein Homology CDS 2443310 2444149 . - 0 ID=cds2219;Parent=gene2284;Dbxref=Genbank:WP_002211061.1;Name=WP_002211061.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_002211061.1;transl_table=11 NC_017265.1 RefSeq gene 2444544 2445299 . + . ID=gene2285;Name=YPC_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11450;old_locus_tag=YPC_2534 NC_017265.1 Protein Homology CDS 2444544 2445299 . + 0 ID=cds2220;Parent=gene2285;Dbxref=Genbank:WP_002211060.1;Name=WP_002211060.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_002211060.1;transl_table=11 NC_017265.1 cmsearch region 2445347 2445775 . - . ID=id201;Note=cspA;gbkey=misc_feature NC_017265.1 RefSeq gene 2445390 2445599 . - . ID=gene2286;Name=YPC_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11455;old_locus_tag=YPC_2535 NC_017265.1 Protein Homology CDS 2445390 2445599 . - 0 ID=cds2221;Parent=gene2286;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11 NC_017265.1 RefSeq gene 2445642 2445758 . - . ID=gene2287;Name=YPC_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11460;old_locus_tag=YPC_2536 NC_017265.1 Protein Homology CDS 2445642 2445758 . - 0 ID=cds2222;Parent=gene2287;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11 NC_017265.1 RefSeq gene 2446524 2446745 . - . ID=gene2288;Name=YPC_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11465 NC_017265.1 Protein Homology CDS 2446524 2446745 . - 0 ID=cds2223;Parent=gene2288;Dbxref=Genbank:WP_002430102.1;Name=WP_002430102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430102.1;transl_table=11 NC_017265.1 RefSeq gene 2446760 2447358 . + . ID=gene2289;Name=YPC_RS11470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11470;old_locus_tag=YPC_2537;pseudo=true NC_017265.1 Protein Homology CDS 2446760 2447358 . + 0 ID=cds2224;Parent=gene2289;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phospholipid:lipid A palmitoyltransferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2447663 2449036 . - . ID=gene2290;Name=YPC_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11475;old_locus_tag=YPC_2538 NC_017265.1 Protein Homology CDS 2447663 2449036 . - 0 ID=cds2225;Parent=gene2290;Dbxref=Genbank:WP_002211055.1;Name=WP_002211055.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002211055.1;transl_table=11 NC_017265.1 RefSeq gene 2449273 2449518 . - . ID=gene2291;Name=YPC_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11480;old_locus_tag=YPC_2539 NC_017265.1 Protein Homology CDS 2449273 2449518 . - 0 ID=cds2226;Parent=gene2291;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11 NC_017265.1 RefSeq gene 2449627 2449926 . - . ID=gene2292;Name=YPC_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11485;old_locus_tag=YPC_2540 NC_017265.1 Protein Homology CDS 2449627 2449926 . - 0 ID=cds2227;Parent=gene2292;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11 NC_017265.1 RefSeq gene 2450189 2450464 . - . ID=gene2293;Name=YPC_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11490;old_locus_tag=YPC_2541 NC_017265.1 Protein Homology CDS 2450189 2450464 . - 0 ID=cds2228;Parent=gene2293;Dbxref=Genbank:WP_002216495.1;Name=WP_002216495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216495.1;transl_table=11 NC_017265.1 RefSeq gene 2451047 2451280 . + . ID=gene2294;Name=YPC_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11495;old_locus_tag=YPC_2542 NC_017265.1 Protein Homology CDS 2451047 2451280 . + 0 ID=cds2229;Parent=gene2294;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11 NC_017265.1 RefSeq gene 2451371 2451610 . - . ID=gene2295;Name=YPC_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11500;old_locus_tag=YPC_2543 NC_017265.1 Protein Homology CDS 2451371 2451610 . - 0 ID=cds2230;Parent=gene2295;Dbxref=Genbank:WP_002211050.1;Name=WP_002211050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211050.1;transl_table=11 NC_017265.1 RefSeq gene 2451822 2451935 . - . ID=gene2296;Name=YPC_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11505 NC_017265.1 Protein Homology CDS 2451822 2451935 . - 0 ID=cds2231;Parent=gene2296;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11 NC_017265.1 RefSeq gene 2452166 2452552 . + . ID=gene2297;Name=YPC_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11510;old_locus_tag=YPC_2544 NC_017265.1 Protein Homology CDS 2452166 2452552 . + 0 ID=cds2232;Parent=gene2297;Dbxref=Genbank:WP_002211048.1;Name=WP_002211048.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211048.1;transl_table=11 NC_017265.1 RefSeq gene 2452634 2452798 . - . ID=gene2298;Name=YPC_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11515;old_locus_tag=YPC_2545 NC_017265.1 Protein Homology CDS 2452634 2452798 . - 0 ID=cds2233;Parent=gene2298;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11 NC_017265.1 RefSeq gene 2453454 2455172 . + . ID=gene2299;Name=YPC_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11520;old_locus_tag=YPC_2546 NC_017265.1 Protein Homology CDS 2453454 2455172 . + 0 ID=cds2234;Parent=gene2299;Dbxref=Genbank:WP_015683658.1;Name=WP_015683658.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_015683658.1;transl_table=11 NC_017265.1 RefSeq gene 2455275 2456126 . + . ID=gene2300;Name=YPC_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11525;old_locus_tag=YPC_2547 NC_017265.1 Protein Homology CDS 2455275 2456126 . + 0 ID=cds2235;Parent=gene2300;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11 NC_017265.1 RefSeq gene 2456363 2456647 . + . ID=gene2301;Name=YPC_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11530;old_locus_tag=YPC_2548 NC_017265.1 Protein Homology CDS 2456363 2456647 . + 0 ID=cds2236;Parent=gene2301;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11 NC_017265.1 RefSeq gene 2457037 2457849 . + . ID=gene2302;Name=YPC_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11535;old_locus_tag=YPC_2549 NC_017265.1 Protein Homology CDS 2457037 2457849 . + 0 ID=cds2237;Parent=gene2302;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11 NC_017265.1 RefSeq gene 2458027 2458102 . + . ID=gene2303;Name=YPC_RS11540;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS11540;old_locus_tag=YPC_2550 NC_017265.1 tRNAscan-SE tRNA 2458027 2458102 . + . ID=rna62;Parent=gene2303;anticodon=(pos:2458060..2458062);gbkey=tRNA;product=tRNA-Asn NC_017265.1 tRNAscan-SE exon 2458027 2458102 . + . ID=id202;Parent=rna62;anticodon=(pos:2458060..2458062);gbkey=tRNA;product=tRNA-Asn NC_017265.1 RefSeq gene 2458250 2458507 . - . ID=gene2304;Name=YPC_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11545;old_locus_tag=YPC_2551 NC_017265.1 Protein Homology CDS 2458250 2458507 . - 0 ID=cds2238;Parent=gene2304;Dbxref=Genbank:WP_002224323.1;Name=WP_002224323.1;gbkey=CDS;product=ThuR%2C regulatory protein for trehalosemaltose transport;protein_id=WP_002224323.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2458454 2460413 . + . ID=id203;gbkey=repeat_region NC_017265.1 RefSeq gene 2458523 2459302 . - . ID=gene2305;Name=YPC_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11550;old_locus_tag=YPC_2552 NC_017265.1 Protein Homology CDS 2458523 2459302 . - 0 ID=cds2239;Parent=gene2305;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 2459302 2460324 . - . ID=gene2306;Name=YPC_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11555;old_locus_tag=YPC_2553 NC_017265.1 Protein Homology CDS 2459302 2460324 . - 0 ID=cds2240;Parent=gene2306;Dbxref=Genbank:WP_015683659.1;Name=WP_015683659.1;gbkey=CDS;product=transposase;protein_id=WP_015683659.1;transl_table=11 NC_017265.1 RefSeq gene 2460338 2461225 . - . ID=gene2307;Name=YPC_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11560;old_locus_tag=YPC_2554 NC_017265.1 Protein Homology CDS 2460338 2461225 . - 0 ID=cds2241;Parent=gene2307;Dbxref=Genbank:WP_002216469.1;Name=WP_002216469.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216469.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2461658 2462986 . + . ID=id204;gbkey=repeat_region NC_017265.1 RefSeq gene 2461700 2462908 . - . ID=gene2308;Name=YPC_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11565;old_locus_tag=YPC_2556 NC_017265.1 Protein Homology CDS 2461700 2462908 . - 0 ID=cds2242;Parent=gene2308;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2462933 2464210 . + . ID=gene2309;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=YPC_RS11570;old_locus_tag=YPC_2557 NC_017265.1 Protein Homology CDS 2462933 2464210 . + 0 ID=cds2243;Parent=gene2309;Dbxref=Genbank:WP_042468818.1;Name=WP_042468818.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_042468818.1;transl_table=11 NC_017265.1 RefSeq gene 2464288 2466414 . + . ID=gene2310;Name=YPC_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11575;old_locus_tag=YPC_2558 NC_017265.1 Protein Homology CDS 2464288 2466414 . + 0 ID=cds2244;Parent=gene2310;Dbxref=Genbank:WP_002213113.1;Name=WP_002213113.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_002213113.1;transl_table=11 NC_017265.1 RefSeq gene 2466431 2466595 . + . ID=gene2311;Name=YPC_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11580;old_locus_tag=YPC_2559 NC_017265.1 Protein Homology CDS 2466431 2466595 . + 0 ID=cds2245;Parent=gene2311;Dbxref=Genbank:WP_002216586.1;Name=WP_002216586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216586.1;transl_table=11 NC_017265.1 RefSeq gene 2466801 2467541 . - . ID=gene2312;Name=YPC_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11585;old_locus_tag=YPC_2561 NC_017265.1 Protein Homology CDS 2466801 2467541 . - 0 ID=cds2246;Parent=gene2312;Dbxref=Genbank:WP_002213120.1;Name=WP_002213120.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_002213120.1;transl_table=11 NC_017265.1 RefSeq gene 2468064 2469056 . + . ID=gene2313;Name=YPC_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11590;old_locus_tag=YPC_2562 NC_017265.1 Protein Homology CDS 2468064 2469056 . + 0 ID=cds2247;Parent=gene2313;Dbxref=Genbank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213121.1;transl_table=11 NC_017265.1 RefSeq gene 2469180 2469686 . + . ID=gene2314;Name=YPC_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11595;old_locus_tag=YPC_2564 NC_017265.1 Protein Homology CDS 2469180 2469686 . + 0 ID=cds2248;Parent=gene2314;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11 NC_017265.1 RefSeq gene 2469706 2470998 . + . ID=gene2315;Name=YPC_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11600;old_locus_tag=YPC_2565 NC_017265.1 Protein Homology CDS 2469706 2470998 . + 0 ID=cds2249;Parent=gene2315;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11 NC_017265.1 RefSeq gene 2471256 2471885 . + . ID=gene2316;Name=YPC_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11605;old_locus_tag=YPC_2566 NC_017265.1 Protein Homology CDS 2471256 2471885 . + 0 ID=cds2250;Parent=gene2316;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11 NC_017265.1 RefSeq gene 2472331 2472406 . + . ID=gene2317;Name=YPC_RS11610;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS11610;old_locus_tag=YPC_2569 NC_017265.1 tRNAscan-SE tRNA 2472331 2472406 . + . ID=rna63;Parent=gene2317;anticodon=(pos:2472364..2472366);gbkey=tRNA;product=tRNA-Asn NC_017265.1 tRNAscan-SE exon 2472331 2472406 . + . ID=id205;Parent=rna63;anticodon=(pos:2472364..2472366);gbkey=tRNA;product=tRNA-Asn NC_017265.1 RefSeq gene 2472752 2473291 . - . ID=gene2318;Name=YPC_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11615;old_locus_tag=YPC_2570 NC_017265.1 Protein Homology CDS 2472752 2473291 . - 0 ID=cds2251;Parent=gene2318;Dbxref=Genbank:WP_015683660.1;Name=WP_015683660.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683660.1;transl_table=11 NC_017265.1 RefSeq gene 2473381 2474076 . - . ID=gene2319;Name=YPC_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11620;old_locus_tag=YPC_2571 NC_017265.1 Protein Homology CDS 2473381 2474076 . - 0 ID=cds2252;Parent=gene2319;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NC_017265.1 RefSeq gene 2474653 2475535 . + . ID=gene2320;Name=YPC_RS11625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11625;pseudo=true NC_017265.1 Protein Homology CDS 2474653 2475535 . + 0 ID=cds2253;Parent=gene2320;exception=annotated by transcript or proteomic data;gbkey=CDS;product=polysaccharide deacetylase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2475571 2476911 . + . ID=gene2321;Name=YPC_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11630;old_locus_tag=YPC_2575 NC_017265.1 Protein Homology CDS 2475571 2476911 . + 0 ID=cds2254;Parent=gene2321;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11 NC_017265.1 RefSeq gene 2476939 2478336 . - . ID=gene2322;Name=YPC_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11635;old_locus_tag=YPC_2576 NC_017265.1 Protein Homology CDS 2476939 2478336 . - 0 ID=cds2255;Parent=gene2322;Dbxref=Genbank:WP_002354070.1;Name=WP_002354070.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_002354070.1;transl_table=11 NC_017265.1 RefSeq gene 2478663 2480030 . + . ID=gene2323;Name=YPC_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11640;old_locus_tag=YPC_2577 NC_017265.1 Protein Homology CDS 2478663 2480030 . + 0 ID=cds2256;Parent=gene2323;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NC_017265.1 RefSeq gene 2480235 2481380 . - . ID=gene2324;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YPC_RS11645;old_locus_tag=YPC_2578 NC_017265.1 Protein Homology CDS 2480235 2481380 . - 0 ID=cds2257;Parent=gene2324;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11 NC_017265.1 RefSeq gene 2481677 2482954 . - . ID=gene2325;Name=YPC_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11650;old_locus_tag=YPC_2580 NC_017265.1 Protein Homology CDS 2481677 2482954 . - 0 ID=cds2258;Parent=gene2325;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NC_017265.1 RefSeq gene 2482986 2483828 . - . ID=gene2326;Name=YPC_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11655;old_locus_tag=YPC_2581 NC_017265.1 Protein Homology CDS 2482986 2483828 . - 0 ID=cds2259;Parent=gene2326;Dbxref=Genbank:WP_002211916.1;Name=WP_002211916.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211916.1;transl_table=11 NC_017265.1 RefSeq gene 2483876 2484616 . - . ID=gene2327;Name=YPC_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11660;old_locus_tag=YPC_2582 NC_017265.1 Protein Homology CDS 2483876 2484616 . - 0 ID=cds2260;Parent=gene2327;Dbxref=Genbank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216393.1;transl_table=11 NC_017265.1 RefSeq gene 2485044 2485466 . + . ID=gene2328;Name=YPC_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11665;old_locus_tag=YPC_2583 NC_017265.1 Protein Homology CDS 2485044 2485466 . + 0 ID=cds2261;Parent=gene2328;Dbxref=Genbank:WP_002211912.1;Name=WP_002211912.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_002211912.1;transl_table=11 NC_017265.1 RefSeq gene 2485475 2486779 . - . ID=gene2329;Name=YPC_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11670;old_locus_tag=YPC_2584 NC_017265.1 Protein Homology CDS 2485475 2486779 . - 0 ID=cds2262;Parent=gene2329;Dbxref=Genbank:WP_002211911.1;Name=WP_002211911.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211911.1;transl_table=11 NC_017265.1 RefSeq gene 2487804 2490956 . + . ID=gene2330;Name=YPC_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11675;old_locus_tag=YPC_2586 NC_017265.1 Protein Homology CDS 2487804 2490956 . + 0 ID=cds2263;Parent=gene2330;Dbxref=Genbank:WP_015683661.1;Name=WP_015683661.1;gbkey=CDS;product=adhesin;protein_id=WP_015683661.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2490881 2492200 . + . ID=id206;gbkey=repeat_region NC_017265.1 RefSeq gene 2490919 2492127 . - . ID=gene2331;Name=YPC_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11680;old_locus_tag=YPC_2587 NC_017265.1 Protein Homology CDS 2490919 2492127 . - 0 ID=cds2264;Parent=gene2331;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2492498 2492815 . - . ID=gene2332;Name=YPC_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11685;old_locus_tag=YPC_2588 NC_017265.1 Protein Homology CDS 2492498 2492815 . - 0 ID=cds2265;Parent=gene2332;Dbxref=Genbank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217522.1;transl_table=11 NC_017265.1 RefSeq gene 2493249 2494358 . - . ID=gene2333;Name=YPC_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11690;old_locus_tag=YPC_2590 NC_017265.1 Protein Homology CDS 2493249 2494358 . - 0 ID=cds2266;Parent=gene2333;Dbxref=Genbank:WP_002211905.1;Name=WP_002211905.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_002211905.1;transl_table=11 NC_017265.1 RefSeq gene 2494651 2496081 . + . ID=gene2334;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YPC_RS11695;old_locus_tag=YPC_2591 NC_017265.1 Protein Homology CDS 2494651 2496081 . + 0 ID=cds2267;Parent=gene2334;Dbxref=Genbank:WP_002211904.1;Name=WP_002211904.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_002211904.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2496116 2496325 . + . ID=id207;gbkey=repeat_region NC_017265.1 RefSeq gene 2496818 2498209 . - . ID=gene2335;Name=YPC_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11700;old_locus_tag=YPC_2592 NC_017265.1 Protein Homology CDS 2496818 2498209 . - 0 ID=cds2268;Parent=gene2335;Dbxref=Genbank:WP_002211902.1;Name=WP_002211902.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_002211902.1;transl_table=11 NC_017265.1 RefSeq gene 2498199 2498414 . - . ID=gene2336;Name=YPC_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11705 NC_017265.1 Protein Homology CDS 2498199 2498414 . - 0 ID=cds2269;Parent=gene2336;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NC_017265.1 RefSeq gene 2498669 2499760 . - . ID=gene2337;Name=YPC_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11710;old_locus_tag=YPC_2594 NC_017265.1 Protein Homology CDS 2498669 2499760 . - 0 ID=cds2270;Parent=gene2337;Dbxref=Genbank:WP_002216312.1;Name=WP_002216312.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11 NC_017265.1 RefSeq gene 2500046 2500939 . + . ID=gene2338;Name=YPC_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11715;old_locus_tag=YPC_2595 NC_017265.1 Protein Homology CDS 2500046 2500939 . + 0 ID=cds2271;Parent=gene2338;Dbxref=Genbank:WP_002216311.1;Name=WP_002216311.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216311.1;transl_table=11 NC_017265.1 RefSeq gene 2500897 2501586 . + . ID=gene2339;Name=YPC_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11720;old_locus_tag=YPC_2596 NC_017265.1 Protein Homology CDS 2500897 2501586 . + 0 ID=cds2272;Parent=gene2339;Dbxref=Genbank:WP_002216310.1;Name=WP_002216310.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216310.1;transl_table=11 NC_017265.1 RefSeq gene 2501583 2502578 . + . ID=gene2340;Name=YPC_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11725;old_locus_tag=YPC_2597 NC_017265.1 Protein Homology CDS 2501583 2502578 . + 0 ID=cds2273;Parent=gene2340;Dbxref=Genbank:WP_002211900.1;Name=WP_002211900.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211900.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2502808 2502914 . + . ID=id208;gbkey=repeat_region NC_017265.1 RefSeq gene 2502823 2503257 . + . ID=gene2341;Name=YPC_RS11730;gbkey=Gene;gene_biotype=other;locus_tag=YPC_RS11730;old_locus_tag=YPC_2598 NC_017265.1 RefSeq gene 2503412 2504239 . - . ID=gene2342;Name=YPC_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11735;old_locus_tag=YPC_2599 NC_017265.1 Protein Homology CDS 2503412 2504239 . - 0 ID=cds2274;Parent=gene2342;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11 NC_017265.1 RefSeq gene 2504945 2505844 . + . ID=gene2343;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YPC_RS11740;old_locus_tag=YPC_2601 NC_017265.1 Protein Homology CDS 2504945 2505844 . + 0 ID=cds2275;Parent=gene2343;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NC_017265.1 RefSeq gene 2505848 2507179 . + . ID=gene2344;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YPC_RS11745;old_locus_tag=YPC_2602 NC_017265.1 Protein Homology CDS 2505848 2507179 . + 0 ID=cds2276;Parent=gene2344;Dbxref=Genbank:WP_002211895.1;Name=WP_002211895.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NC_017265.1 RefSeq gene 2507182 2508330 . + . ID=gene2345;Name=YPC_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11750;old_locus_tag=YPC_2603 NC_017265.1 Protein Homology CDS 2507182 2508330 . + 0 ID=cds2277;Parent=gene2345;Dbxref=Genbank:WP_002211894.1;Name=WP_002211894.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_002211894.1;transl_table=11 NC_017265.1 RefSeq gene 2508327 2509394 . + . ID=gene2346;Name=YPC_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11755;old_locus_tag=YPC_2604 NC_017265.1 Protein Homology CDS 2508327 2509394 . + 0 ID=cds2278;Parent=gene2346;Dbxref=Genbank:WP_002211893.1;Name=WP_002211893.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisB;protein_id=WP_002211893.1;transl_table=11 NC_017265.1 RefSeq gene 2509394 2509984 . + . ID=gene2347;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YPC_RS11760;old_locus_tag=YPC_2605 NC_017265.1 Protein Homology CDS 2509394 2509984 . + 0 ID=cds2279;Parent=gene2347;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NC_017265.1 RefSeq gene 2509990 2510727 . + . ID=gene2348;Name=YPC_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11765;old_locus_tag=YPC_2606 NC_017265.1 Protein Homology CDS 2509990 2510727 . + 0 ID=cds2280;Parent=gene2348;Dbxref=Genbank:WP_002211891.1;Name=WP_002211891.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NC_017265.1 RefSeq gene 2510709 2511485 . + . ID=gene2349;Name=YPC_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11770;old_locus_tag=YPC_2607 NC_017265.1 Protein Homology CDS 2510709 2511485 . + 0 ID=cds2281;Parent=gene2349;Dbxref=Genbank:WP_002211890.1;Name=WP_002211890.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11 NC_017265.1 RefSeq gene 2511479 2512093 . + . ID=gene2350;Name=YPC_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11775;old_locus_tag=YPC_2608 NC_017265.1 Protein Homology CDS 2511479 2512093 . + 0 ID=cds2282;Parent=gene2350;Dbxref=Genbank:WP_002211889.1;Name=WP_002211889.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisIE;protein_id=WP_002211889.1;transl_table=11 NC_017265.1 RefSeq gene 2512293 2513702 . - . ID=gene2351;Name=YPC_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11780;old_locus_tag=YPC_2609 NC_017265.1 Protein Homology CDS 2512293 2513702 . - 0 ID=cds2283;Parent=gene2351;Dbxref=Genbank:WP_002211888.1;Name=WP_002211888.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11 NC_017265.1 RefSeq gene 2514088 2514981 . - . ID=gene2352;Name=YPC_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11785;old_locus_tag=YPC_2610 NC_017265.1 Protein Homology CDS 2514088 2514981 . - 0 ID=cds2284;Parent=gene2352;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11 NC_017265.1 RefSeq gene 2515065 2515955 . - . ID=gene2353;Name=YPC_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11790;old_locus_tag=YPC_2611 NC_017265.1 Protein Homology CDS 2515065 2515955 . - 0 ID=cds2285;Parent=gene2353;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11 NC_017265.1 RefSeq gene 2516901 2518715 . + . ID=gene2354;Name=YPC_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11795;old_locus_tag=YPC_2613 NC_017265.1 Protein Homology CDS 2516901 2518715 . + 0 ID=cds2286;Parent=gene2354;Dbxref=Genbank:WP_002211884.1;Name=WP_002211884.1;gbkey=CDS;product=siderophore biosynthesis protein%2C IucA/IucC family;protein_id=WP_002211884.1;transl_table=11 NC_017265.1 RefSeq gene 2518928 2521189 . + . ID=gene2355;Name=YPC_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11800;old_locus_tag=YPC_2614 NC_017265.1 Protein Homology CDS 2518928 2521189 . + 0 ID=cds2287;Parent=gene2355;Dbxref=Genbank:WP_002211883.1;Name=WP_002211883.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211883.1;transl_table=11 NC_017265.1 RefSeq gene 2521279 2522358 . + . ID=gene2356;Name=YPC_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11805;old_locus_tag=YPC_2615 NC_017265.1 Protein Homology CDS 2521279 2522358 . + 0 ID=cds2288;Parent=gene2356;Dbxref=Genbank:WP_002211882.1;Name=WP_002211882.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_002211882.1;transl_table=11 NC_017265.1 RefSeq gene 2522355 2523396 . + . ID=gene2357;Name=YPC_RS11810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11810;pseudo=true NC_017265.1 Protein Homology CDS 2522355 2523396 . + 0 ID=cds2289;Parent=gene2357;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron ABC transporter permease;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2523383 2524423 . + . ID=gene2358;Name=YPC_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11815;old_locus_tag=YPC_2618 NC_017265.1 Protein Homology CDS 2523383 2524423 . + 0 ID=cds2290;Parent=gene2358;Dbxref=Genbank:WP_002211880.1;Name=WP_002211880.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211880.1;transl_table=11 NC_017265.1 RefSeq gene 2524450 2525268 . + . ID=gene2359;Name=YPC_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11820;old_locus_tag=YPC_2619 NC_017265.1 Protein Homology CDS 2524450 2525268 . + 0 ID=cds2291;Parent=gene2359;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11 NC_017265.1 RefSeq gene 2525377 2527221 . - . ID=gene2360;Name=YPC_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11825 NC_017265.1 Protein Homology CDS 2525377 2527221 . - 0 ID=cds2292;Parent=gene2360;Dbxref=Genbank:WP_002215001.1;Name=WP_002215001.1;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=WP_002215001.1;transl_table=11 NC_017265.1 RefSeq gene 2527218 2527796 . - . ID=gene2361;Name=YPC_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11830 NC_017265.1 Protein Homology CDS 2527218 2527796 . - 0 ID=cds2293;Parent=gene2361;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11 NC_017265.1 RefSeq gene 2527796 2529094 . - . ID=gene2362;Name=YPC_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11835 NC_017265.1 Protein Homology CDS 2527796 2529094 . - 0 ID=cds2294;Parent=gene2362;Dbxref=Genbank:WP_002211878.1;Name=WP_002211878.1;gbkey=CDS;product=lysine N6-hydroxylase/L-ornithine N5-oxygenase family;protein_id=WP_002211878.1;transl_table=11 NC_017265.1 RefSeq gene 2529129 2530676 . - . ID=gene2363;Name=YPC_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11840;old_locus_tag=YPC_2623 NC_017265.1 Protein Homology CDS 2529129 2530676 . - 0 ID=cds2295;Parent=gene2363;Dbxref=Genbank:WP_002211877.1;Name=WP_002211877.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_002211877.1;transl_table=11 NC_017265.1 RefSeq gene 2530828 2531607 . - . ID=gene2364;Name=YPC_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11845;old_locus_tag=YPC_2624 NC_017265.1 Protein Homology CDS 2530828 2531607 . - 0 ID=cds2296;Parent=gene2364;Dbxref=Genbank:WP_002211876.1;Name=WP_002211876.1;gbkey=CDS;product=iron reductase;protein_id=WP_002211876.1;transl_table=11 NC_017265.1 RefSeq gene 2532049 2533662 . + . ID=gene2365;Name=YPC_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11850;old_locus_tag=YPC_2625 NC_017265.1 Protein Homology CDS 2532049 2533662 . + 0 ID=cds2297;Parent=gene2365;Dbxref=Genbank:WP_002223436.1;Name=WP_002223436.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223436.1;transl_table=11 NC_017265.1 RefSeq gene 2533807 2535663 . - . ID=gene2366;Name=YPC_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11855;old_locus_tag=YPC_2626 NC_017265.1 Protein Homology CDS 2533807 2535663 . - 0 ID=cds2298;Parent=gene2366;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NC_017265.1 RefSeq gene 2535850 2536431 . - . ID=gene2367;Name=YPC_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11860;old_locus_tag=YPC_2627 NC_017265.1 Protein Homology CDS 2535850 2536431 . - 0 ID=cds2299;Parent=gene2367;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11 NC_017265.1 RefSeq gene 2536536 2537177 . - . ID=gene2368;Name=YPC_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11865;old_locus_tag=YPC_2628 NC_017265.1 Protein Homology CDS 2536536 2537177 . - 0 ID=cds2300;Parent=gene2368;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NC_017265.1 RefSeq gene 2537422 2538534 . - . ID=gene2369;Name=YPC_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11870;old_locus_tag=YPC_2629 NC_017265.1 Protein Homology CDS 2537422 2538534 . - 0 ID=cds2301;Parent=gene2369;Dbxref=Genbank:WP_015683662.1;Name=WP_015683662.1;gbkey=CDS;product=ATPase;protein_id=WP_015683662.1;transl_table=11 NC_017265.1 RefSeq gene 2538799 2540826 . + . ID=gene2370;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YPC_RS11875;old_locus_tag=YPC_2630 NC_017265.1 Protein Homology CDS 2538799 2540826 . + 0 ID=cds2302;Parent=gene2370;Dbxref=Genbank:WP_002211870.1;Name=WP_002211870.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_002211870.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2540879 2541602 . + . ID=id209;gbkey=repeat_region NC_017265.1 RefSeq gene 2540990 2541448 . - . ID=gene2371;Name=YPC_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11880;old_locus_tag=YPC_2631 NC_017265.1 Protein Homology CDS 2540990 2541448 . - 0 ID=cds2303;Parent=gene2371;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 2541438 2541626 . - . ID=gene2372;Name=YPC_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11885 NC_017265.1 Protein Homology CDS 2541438 2541626 . - 0 ID=cds2304;Parent=gene2372;Dbxref=Genbank:WP_011171814.1;Name=WP_011171814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171814.1;transl_table=11 NC_017265.1 RefSeq gene 2541666 2542328 . - . ID=gene2373;Name=YPC_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11890;old_locus_tag=YPC_2633 NC_017265.1 Protein Homology CDS 2541666 2542328 . - 0 ID=cds2305;Parent=gene2373;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11 NC_017265.1 RefSeq gene 2543026 2544102 . + . ID=gene2374;Name=YPC_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11895;old_locus_tag=YPC_2634 NC_017265.1 Protein Homology CDS 2543026 2544102 . + 0 ID=cds2306;Parent=gene2374;Dbxref=Genbank:WP_002211975.1;Name=WP_002211975.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002211975.1;transl_table=11 NC_017265.1 RefSeq gene 2544120 2545374 . + . ID=gene2375;Name=YPC_RS11900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS11900;pseudo=true NC_017265.1 Protein Homology CDS 2544120 2545374 . + 0 ID=cds2307;Parent=gene2375;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2545707 2546888 . + . ID=gene2376;Name=YPC_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11905;old_locus_tag=YPC_2637 NC_017265.1 Protein Homology CDS 2545707 2546888 . + 0 ID=cds2308;Parent=gene2376;Dbxref=Genbank:WP_015683664.1;Name=WP_015683664.1;gbkey=CDS;product=MFS transporter;protein_id=WP_015683664.1;transl_table=11 NC_017265.1 RefSeq gene 2547130 2547537 . + . ID=gene2377;Name=YPC_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11910;old_locus_tag=YPC_2638 NC_017265.1 Protein Homology CDS 2547130 2547537 . + 0 ID=cds2309;Parent=gene2377;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11 NC_017265.1 RefSeq gene 2547576 2548229 . + . ID=gene2378;Name=YPC_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11915;old_locus_tag=YPC_2639 NC_017265.1 Protein Homology CDS 2547576 2548229 . + 0 ID=cds2310;Parent=gene2378;Dbxref=Genbank:WP_015683665.1;Name=WP_015683665.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683665.1;transl_table=11 NC_017265.1 RefSeq gene 2548555 2549439 . + . ID=gene2379;Name=YPC_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11920;old_locus_tag=YPC_2641 NC_017265.1 Protein Homology CDS 2548555 2549439 . + 0 ID=cds2311;Parent=gene2379;Dbxref=Genbank:WP_002211969.1;Name=WP_002211969.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NC_017265.1 RefSeq gene 2549795 2551492 . + . ID=gene2380;Name=YPC_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11925;old_locus_tag=YPC_2642 NC_017265.1 Protein Homology CDS 2549795 2551492 . + 0 ID=cds2312;Parent=gene2380;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NC_017265.1 RefSeq gene 2551773 2552510 . + . ID=gene2381;Name=YPC_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11930;old_locus_tag=YPC_2643 NC_017265.1 Protein Homology CDS 2551773 2552510 . + 0 ID=cds2313;Parent=gene2381;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11 NC_017265.1 RefSeq gene 2552955 2553965 . - . ID=gene2382;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YPC_RS11935;old_locus_tag=YPC_2644 NC_017265.1 Protein Homology CDS 2552955 2553965 . - 0 ID=cds2314;Parent=gene2382;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11 NC_017265.1 RefSeq gene 2553986 2555506 . - . ID=gene2383;Name=YPC_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11940;old_locus_tag=YPC_2645 NC_017265.1 Protein Homology CDS 2553986 2555506 . - 0 ID=cds2315;Parent=gene2383;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NC_017265.1 RefSeq gene 2555736 2556728 . - . ID=gene2384;Name=YPC_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11945;old_locus_tag=YPC_2646 NC_017265.1 Protein Homology CDS 2555736 2556728 . - 0 ID=cds2316;Parent=gene2384;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11 NC_017265.1 RefSeq gene 2557476 2558642 . - . ID=gene2385;Name=YPC_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11950;old_locus_tag=YPC_2648 NC_017265.1 Protein Homology CDS 2557476 2558642 . - 0 ID=cds2317;Parent=gene2385;Dbxref=Genbank:WP_002211961.1;Name=WP_002211961.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211961.1;transl_table=11 NC_017265.1 RefSeq gene 2558697 2559359 . - . ID=gene2386;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YPC_RS11955;old_locus_tag=YPC_2649 NC_017265.1 Protein Homology CDS 2558697 2559359 . - 0 ID=cds2318;Parent=gene2386;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11 NC_017265.1 RefSeq gene 2559543 2560694 . - . ID=gene2387;Name=YPC_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11960;old_locus_tag=YPC_2650 NC_017265.1 Protein Homology CDS 2559543 2560694 . - 0 ID=cds2319;Parent=gene2387;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11 NC_017265.1 RefSeq gene 2560830 2561699 . + . ID=gene2388;Name=YPC_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11965;old_locus_tag=YPC_2651 NC_017265.1 Protein Homology CDS 2560830 2561699 . + 0 ID=cds2320;Parent=gene2388;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11 NC_017265.1 RefSeq gene 2561973 2563112 . + . ID=gene2389;Name=YPC_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11970;old_locus_tag=YPC_2652 NC_017265.1 Protein Homology CDS 2561973 2563112 . + 0 ID=cds2321;Parent=gene2389;Dbxref=Genbank:WP_002211957.1;Name=WP_002211957.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002211957.1;transl_table=11 NC_017265.1 RefSeq gene 2563133 2563975 . + . ID=gene2390;Name=YPC_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11975;old_locus_tag=YPC_2653 NC_017265.1 Protein Homology CDS 2563133 2563975 . + 0 ID=cds2322;Parent=gene2390;Dbxref=Genbank:WP_002211956.1;Name=WP_002211956.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_002211956.1;transl_table=11 NC_017265.1 RefSeq gene 2564244 2564444 . + . ID=gene2391;Name=YPC_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11985;old_locus_tag=YPC_2654 NC_017265.1 Protein Homology CDS 2564244 2564444 . + 0 ID=cds2323;Parent=gene2391;Dbxref=Genbank:WP_002211954.1;Name=WP_002211954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211954.1;transl_table=11 NC_017265.1 RefSeq gene 2564528 2566888 . + . ID=gene2392;Name=YPC_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11990;old_locus_tag=YPC_2655 NC_017265.1 Protein Homology CDS 2564528 2566888 . + 0 ID=cds2324;Parent=gene2392;Dbxref=Genbank:WP_002215886.1;Name=WP_002215886.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215886.1;transl_table=11 NC_017265.1 RefSeq gene 2566890 2568152 . + . ID=gene2393;Name=YPC_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS11995;old_locus_tag=YPC_2656 NC_017265.1 Protein Homology CDS 2566890 2568152 . + 0 ID=cds2325;Parent=gene2393;Dbxref=Genbank:WP_002211952.1;Name=WP_002211952.1;gbkey=CDS;product=RND transporter;protein_id=WP_002211952.1;transl_table=11 NC_017265.1 RefSeq gene 2568154 2568822 . + . ID=gene2394;Name=YPC_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12000;old_locus_tag=YPC_2657 NC_017265.1 Protein Homology CDS 2568154 2568822 . + 0 ID=cds2326;Parent=gene2394;Dbxref=Genbank:WP_002211951.1;Name=WP_002211951.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211951.1;transl_table=11 NC_017265.1 RefSeq gene 2568832 2570142 . + . ID=gene2395;Name=YPC_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12005;old_locus_tag=YPC_2658 NC_017265.1 Protein Homology CDS 2568832 2570142 . + 0 ID=cds2327;Parent=gene2395;Dbxref=Genbank:WP_002211950.1;Name=WP_002211950.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002211950.1;transl_table=11 NC_017265.1 RefSeq gene 2570677 2571951 . + . ID=gene2396;Name=YPC_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12010;old_locus_tag=YPC_2659 NC_017265.1 Protein Homology CDS 2570677 2571951 . + 0 ID=cds2328;Parent=gene2396;Dbxref=Genbank:WP_002211949.1;Name=WP_002211949.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_002211949.1;transl_table=11 NC_017265.1 RefSeq gene 2571953 2572723 . + . ID=gene2397;Name=YPC_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12015;old_locus_tag=YPC_2660 NC_017265.1 Protein Homology CDS 2571953 2572723 . + 0 ID=cds2329;Parent=gene2397;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2572784 2574104 . + . ID=id210;gbkey=repeat_region NC_017265.1 RefSeq gene 2572859 2574067 . + . ID=gene2398;Name=YPC_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12020;old_locus_tag=YPC_2661 NC_017265.1 Protein Homology CDS 2572859 2574067 . + 0 ID=cds2330;Parent=gene2398;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2574111 2574764 . - . ID=gene2399;Name=YPC_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12025;old_locus_tag=YPC_2662 NC_017265.1 Protein Homology CDS 2574111 2574764 . - 0 ID=cds2331;Parent=gene2399;Dbxref=Genbank:WP_002211947.1;Name=WP_002211947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211947.1;transl_table=11 NC_017265.1 RefSeq gene 2574992 2576563 . - . ID=gene2400;Name=YPC_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12030;old_locus_tag=YPC_2663 NC_017265.1 Protein Homology CDS 2574992 2576563 . - 0 ID=cds2332;Parent=gene2400;Dbxref=Genbank:WP_002354043.1;Name=WP_002354043.1;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_002354043.1;transl_table=11 NC_017265.1 RefSeq gene 2577270 2577893 . + . ID=gene2401;Name=YPC_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12035;old_locus_tag=YPC_2664 NC_017265.1 Protein Homology CDS 2577270 2577893 . + 0 ID=cds2333;Parent=gene2401;Dbxref=Genbank:WP_002211945.1;Name=WP_002211945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211945.1;transl_table=11 NC_017265.1 RefSeq gene 2578105 2579472 . - . ID=gene2402;Name=YPC_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12040;old_locus_tag=YPC_2665 NC_017265.1 Protein Homology CDS 2578105 2579472 . - 0 ID=cds2334;Parent=gene2402;Dbxref=Genbank:WP_002211944.1;Name=WP_002211944.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211944.1;transl_table=11 NC_017265.1 RefSeq gene 2579497 2579949 . - . ID=gene2403;Name=YPC_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12045;old_locus_tag=YPC_2666 NC_017265.1 Protein Homology CDS 2579497 2579949 . - 0 ID=cds2335;Parent=gene2403;Dbxref=Genbank:WP_002211943.1;Name=WP_002211943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211943.1;transl_table=11 NC_017265.1 RefSeq gene 2579949 2580530 . - . ID=gene2404;Name=YPC_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12050;old_locus_tag=YPC_2667 NC_017265.1 Protein Homology CDS 2579949 2580530 . - 0 ID=cds2336;Parent=gene2404;Dbxref=Genbank:WP_002214552.1;Name=WP_002214552.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214552.1;transl_table=11 NC_017265.1 RefSeq gene 2580505 2581590 . - . ID=gene2405;Name=YPC_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12055;old_locus_tag=YPC_2668 NC_017265.1 Protein Homology CDS 2580505 2581590 . - 0 ID=cds2337;Parent=gene2405;Dbxref=Genbank:WP_002211941.1;Name=WP_002211941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211941.1;transl_table=11 NC_017265.1 RefSeq gene 2581554 2583317 . - . ID=gene2406;Name=YPC_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12060;old_locus_tag=YPC_2669 NC_017265.1 Protein Homology CDS 2581554 2583317 . - 0 ID=cds2338;Parent=gene2406;Dbxref=Genbank:WP_002211940.1;Name=WP_002211940.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002211940.1;transl_table=11 NC_017265.1 RefSeq gene 2583538 2583993 . - . ID=gene2407;Name=YPC_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12065;old_locus_tag=YPC_2670 NC_017265.1 Protein Homology CDS 2583538 2583993 . - 0 ID=cds2339;Parent=gene2407;Dbxref=Genbank:WP_002211939.1;Name=WP_002211939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211939.1;transl_table=11 NC_017265.1 RefSeq gene 2584008 2585066 . - . ID=gene2408;Name=YPC_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12070;old_locus_tag=YPC_2671 NC_017265.1 Protein Homology CDS 2584008 2585066 . - 0 ID=cds2340;Parent=gene2408;Dbxref=Genbank:WP_002211938.1;Name=WP_002211938.1;gbkey=CDS;product=PAAR domain protein;protein_id=WP_002211938.1;transl_table=11 NC_017265.1 RefSeq gene 2585084 2586685 . - . ID=gene2409;Name=YPC_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12075;old_locus_tag=YPC_2672 NC_017265.1 Protein Homology CDS 2585084 2586685 . - 0 ID=cds2341;Parent=gene2409;Dbxref=Genbank:WP_002211937.1;Name=WP_002211937.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211937.1;transl_table=11 NC_017265.1 RefSeq gene 2586729 2590151 . - . ID=gene2410;Name=YPC_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12080;old_locus_tag=YPC_2673 NC_017265.1 Protein Homology CDS 2586729 2590151 . - 0 ID=cds2342;Parent=gene2410;Dbxref=Genbank:WP_002211936.1;Name=WP_002211936.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_002211936.1;transl_table=11 NC_017265.1 RefSeq gene 2590148 2591380 . - . ID=gene2411;Name=YPC_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12085;old_locus_tag=YPC_2674 NC_017265.1 Protein Homology CDS 2590148 2591380 . - 0 ID=cds2343;Parent=gene2411;Dbxref=Genbank:WP_002211935.1;Name=WP_002211935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211935.1;transl_table=11 NC_017265.1 RefSeq gene 2592492 2592812 . + . ID=gene2412;Name=YPC_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12090;old_locus_tag=YPC_2676 NC_017265.1 Protein Homology CDS 2592492 2592812 . + 0 ID=cds2344;Parent=gene2412;Dbxref=Genbank:WP_002214561.1;Name=WP_002214561.1;gbkey=CDS;product=transposase;protein_id=WP_002214561.1;transl_table=11 NC_017265.1 RefSeq gene 2593545 2594015 . - . ID=gene2413;Name=YPC_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12095;old_locus_tag=YPC_2679 NC_017265.1 Protein Homology CDS 2593545 2594015 . - 0 ID=cds2345;Parent=gene2413;Dbxref=Genbank:WP_002214564.1;Name=WP_002214564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214564.1;transl_table=11 NC_017265.1 RefSeq gene 2594188 2596371 . - . ID=gene2414;Name=YPC_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12100;old_locus_tag=YPC_2681 NC_017265.1 Protein Homology CDS 2594188 2596371 . - 0 ID=cds2346;Parent=gene2414;Dbxref=Genbank:WP_002211932.1;Name=WP_002211932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211932.1;transl_table=11 NC_017265.1 RefSeq gene 2596387 2596647 . - . ID=gene2415;Name=YPC_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12105;old_locus_tag=YPC_2682 NC_017265.1 Protein Homology CDS 2596387 2596647 . - 0 ID=cds2347;Parent=gene2415;Dbxref=Genbank:WP_002211931.1;Name=WP_002211931.1;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=WP_002211931.1;transl_table=11 NC_017265.1 RefSeq gene 2596801 2597574 . - . ID=gene2416;Name=YPC_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12110;old_locus_tag=YPC_2683 NC_017265.1 Protein Homology CDS 2596801 2597574 . - 0 ID=cds2348;Parent=gene2416;Dbxref=Genbank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11 NC_017265.1 RefSeq gene 2597571 2599871 . - . ID=gene2417;Name=YPC_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12115;old_locus_tag=YPC_2684 NC_017265.1 Protein Homology CDS 2597571 2599871 . - 0 ID=cds2349;Parent=gene2417;Dbxref=Genbank:WP_002211929.1;Name=WP_002211929.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211929.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2598405 2600528 . + . ID=id211;gbkey=repeat_region NC_017265.1 RefSeq gene 2599887 2602235 . - . ID=gene2418;Name=YPC_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12120;old_locus_tag=YPC_2685 NC_017265.1 Protein Homology CDS 2599887 2602235 . - 0 ID=cds2350;Parent=gene2418;Dbxref=Genbank:WP_015683667.1;Name=WP_015683667.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_015683667.1;transl_table=11 NC_017265.1 RefSeq gene 2602238 2604880 . - . ID=gene2419;Name=YPC_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12125;old_locus_tag=YPC_2686 NC_017265.1 Protein Homology CDS 2602238 2604880 . - 0 ID=cds2351;Parent=gene2419;Dbxref=Genbank:WP_002211927.1;Name=WP_002211927.1;gbkey=CDS;product=ATPase;protein_id=WP_002211927.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2603195 2604899 . + . ID=id212;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 2605192 2612060 . + . ID=id213;gbkey=repeat_region NC_017265.1 RefSeq gene 2605268 2605759 . - . ID=gene2420;Name=YPC_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12130;old_locus_tag=YPC_2687 NC_017265.1 Protein Homology CDS 2605268 2605759 . - 0 ID=cds2352;Parent=gene2420;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_017265.1 RefSeq gene 2605763 2607499 . - . ID=gene2421;Name=YPC_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12135;old_locus_tag=YPC_2688 NC_017265.1 Protein Homology CDS 2605763 2607499 . - 0 ID=cds2353;Parent=gene2421;Dbxref=Genbank:WP_015683668.1;Name=WP_015683668.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683668.1;transl_table=11 NC_017265.1 RefSeq gene 2607499 2608185 . - . ID=gene2422;Name=YPC_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12140;old_locus_tag=YPC_2689 NC_017265.1 Protein Homology CDS 2607499 2608185 . - 0 ID=cds2354;Parent=gene2422;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_017265.1 RefSeq gene 2608182 2609534 . - . ID=gene2423;Name=YPC_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12145;old_locus_tag=YPC_2690 NC_017265.1 Protein Homology CDS 2608182 2609534 . - 0 ID=cds2355;Parent=gene2423;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11 NC_017265.1 RefSeq gene 2609546 2611090 . - . ID=gene2424;Name=YPC_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12150;old_locus_tag=YPC_2691 NC_017265.1 Protein Homology CDS 2609546 2611090 . - 0 ID=cds2356;Parent=gene2424;Dbxref=Genbank:WP_002215896.1;Name=WP_002215896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215896.1;transl_table=11 NC_017265.1 RefSeq gene 2611133 2611633 . - . ID=gene2425;Name=YPC_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12155;old_locus_tag=YPC_2692 NC_017265.1 Protein Homology CDS 2611133 2611633 . - 0 ID=cds2357;Parent=gene2425;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_017265.1 RefSeq gene 2612298 2612465 . - . ID=gene2426;Name=YPC_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12160 NC_017265.1 Protein Homology CDS 2612298 2612465 . - 0 ID=cds2358;Parent=gene2426;Dbxref=Genbank:WP_002214708.1;Name=WP_002214708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214708.1;transl_table=11 NC_017265.1 RefSeq gene 2612622 2613470 . - . ID=gene2427;Name=YPC_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12165;old_locus_tag=YPC_2693 NC_017265.1 Protein Homology CDS 2612622 2613470 . - 0 ID=cds2359;Parent=gene2427;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11 NC_017265.1 RefSeq gene 2613569 2613817 . - . ID=gene2428;Name=YPC_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12170;old_locus_tag=YPC_2694 NC_017265.1 Protein Homology CDS 2613569 2613817 . - 0 ID=cds2360;Parent=gene2428;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11 NC_017265.1 RefSeq gene 2613855 2614187 . - . ID=gene2429;Name=YPC_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12175 NC_017265.1 Protein Homology CDS 2613855 2614187 . - 0 ID=cds2361;Parent=gene2429;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11 NC_017265.1 RefSeq gene 2614382 2615170 . - . ID=gene2430;Name=YPC_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12180;old_locus_tag=YPC_2697 NC_017265.1 Protein Homology CDS 2614382 2615170 . - 0 ID=cds2362;Parent=gene2430;Dbxref=Genbank:WP_002213024.1;Name=WP_002213024.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002213024.1;transl_table=11 NC_017265.1 RefSeq gene 2615173 2615925 . - . ID=gene2431;Name=YPC_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12185 NC_017265.1 Protein Homology CDS 2615173 2615925 . - 0 ID=cds2363;Parent=gene2431;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11 NC_017265.1 RefSeq gene 2615927 2616646 . - . ID=gene2432;Name=YPC_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12190 NC_017265.1 Protein Homology CDS 2615927 2616646 . - 0 ID=cds2364;Parent=gene2432;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11 NC_017265.1 RefSeq gene 2616639 2617877 . - . ID=gene2433;Name=YPC_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12195;old_locus_tag=YPC_2700 NC_017265.1 Protein Homology CDS 2616639 2617877 . - 0 ID=cds2365;Parent=gene2433;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11 NC_017265.1 RefSeq gene 2617893 2618630 . - . ID=gene2434;Name=YPC_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12200;old_locus_tag=YPC_2701 NC_017265.1 Protein Homology CDS 2617893 2618630 . - 0 ID=cds2366;Parent=gene2434;Dbxref=Genbank:WP_002213030.1;Name=WP_002213030.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_002213030.1;transl_table=11 NC_017265.1 RefSeq gene 2618632 2619915 . - . ID=gene2435;Name=YPC_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12205;old_locus_tag=YPC_2702 NC_017265.1 Protein Homology CDS 2618632 2619915 . - 0 ID=cds2367;Parent=gene2435;Dbxref=Genbank:WP_002213032.1;Name=WP_002213032.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_002213032.1;transl_table=11 NC_017265.1 RefSeq gene 2619905 2620429 . - . ID=gene2436;Name=YPC_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12210;old_locus_tag=YPC_2703 NC_017265.1 Protein Homology CDS 2619905 2620429 . - 0 ID=cds2368;Parent=gene2436;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11 NC_017265.1 RefSeq gene 2620693 2620911 . - . ID=gene2437;Name=YPC_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12215 NC_017265.1 Protein Homology CDS 2620693 2620911 . - 0 ID=cds2369;Parent=gene2437;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NC_017265.1 RefSeq gene 2621642 2622388 . + . ID=gene2438;Name=YPC_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12220;old_locus_tag=YPC_2705 NC_017265.1 Protein Homology CDS 2621642 2622388 . + 0 ID=cds2370;Parent=gene2438;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11 NC_017265.1 RefSeq gene 2622542 2624959 . + . ID=gene2439;Name=YPC_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12225;old_locus_tag=YPC_2706 NC_017265.1 Protein Homology CDS 2622542 2624959 . + 0 ID=cds2371;Parent=gene2439;Dbxref=Genbank:WP_015683670.1;Name=WP_015683670.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_015683670.1;transl_table=11 NC_017265.1 RefSeq gene 2625393 2626544 . - . ID=gene2440;Name=YPC_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12230;old_locus_tag=YPC_2707 NC_017265.1 Protein Homology CDS 2625393 2626544 . - 0 ID=cds2372;Parent=gene2440;Dbxref=Genbank:WP_002358281.1;Name=WP_002358281.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002358281.1;transl_table=11 NC_017265.1 RefSeq gene 2626559 2626810 . - . ID=gene2441;Name=YPC_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12235;old_locus_tag=YPC_2708 NC_017265.1 Protein Homology CDS 2626559 2626810 . - 0 ID=cds2373;Parent=gene2441;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11 NC_017265.1 RefSeq gene 2626844 2627200 . - . ID=gene2442;Name=YPC_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12240;old_locus_tag=YPC_2709 NC_017265.1 Protein Homology CDS 2626844 2627200 . - 0 ID=cds2374;Parent=gene2442;Dbxref=Genbank:WP_002214713.1;Name=WP_002214713.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002214713.1;transl_table=11 NC_017265.1 RefSeq gene 2627570 2627857 . - . ID=gene2443;Name=YPC_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12245;old_locus_tag=YPC_2710 NC_017265.1 Protein Homology CDS 2627570 2627857 . - 0 ID=cds2375;Parent=gene2443;Dbxref=Genbank:WP_002228572.1;Name=WP_002228572.1;gbkey=CDS;product=integrase;protein_id=WP_002228572.1;transl_table=11 NC_017265.1 RefSeq gene 2628277 2628364 . - . ID=gene2444;Name=YPC_RS12250;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS12250;old_locus_tag=YPC_2711 NC_017265.1 tRNAscan-SE tRNA 2628277 2628364 . - . ID=rna64;Parent=gene2444;anticodon=(pos:complement(2628328..2628330));gbkey=tRNA;product=tRNA-Ser NC_017265.1 tRNAscan-SE exon 2628277 2628364 . - . ID=id214;Parent=rna64;anticodon=(pos:complement(2628328..2628330));gbkey=tRNA;product=tRNA-Ser NC_017265.1 RefSeq gene 2628605 2628934 . + . ID=gene2445;Name=YPC_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12255;old_locus_tag=YPC_2712 NC_017265.1 Protein Homology CDS 2628605 2628934 . + 0 ID=cds2376;Parent=gene2445;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NC_017265.1 RefSeq gene 2628986 2629264 . - . ID=gene2446;Name=YPC_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12260;old_locus_tag=YPC_2713 NC_017265.1 Protein Homology CDS 2628986 2629264 . - 0 ID=cds2377;Parent=gene2446;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NC_017265.1 RefSeq gene 2629358 2630548 . + . ID=gene2447;Name=YPC_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12265;old_locus_tag=YPC_2714 NC_017265.1 Protein Homology CDS 2629358 2630548 . + 0 ID=cds2378;Parent=gene2447;Dbxref=Genbank:WP_002213052.1;Name=WP_002213052.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_002213052.1;transl_table=11 NC_017265.1 RefSeq gene 2630609 2630926 . + . ID=gene2448;Name=YPC_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12270;old_locus_tag=YPC_2715 NC_017265.1 Protein Homology CDS 2630609 2630926 . + 0 ID=cds2379;Parent=gene2448;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NC_017265.1 RefSeq gene 2631035 2631451 . - . ID=gene2449;Name=YPC_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12275;old_locus_tag=YPC_2717 NC_017265.1 Protein Homology CDS 2631035 2631451 . - 0 ID=cds2380;Parent=gene2449;Dbxref=Genbank:WP_002213056.1;Name=WP_002213056.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213056.1;transl_table=11 NC_017265.1 RefSeq gene 2631767 2632447 . + . ID=gene2450;Name=YPC_RS12280;end_range=2632447,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12280;old_locus_tag=YPC_2719;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 2631767 2632447 . + 0 ID=cds2381;Parent=gene2450;end_range=2632447,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2632627 2633091 . + . ID=gene2451;Name=YPC_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12285;old_locus_tag=YPC_2720 NC_017265.1 Protein Homology CDS 2632627 2633091 . + 0 ID=cds2382;Parent=gene2451;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NC_017265.1 RefSeq gene 2633152 2635206 . - . ID=gene2452;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YPC_RS12290;old_locus_tag=YPC_2721 NC_017265.1 Protein Homology CDS 2633152 2635206 . - 0 ID=cds2383;Parent=gene2452;Dbxref=Genbank:WP_002221095.1;Name=WP_002221095.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_002221095.1;transl_table=11 NC_017265.1 RefSeq gene 2635400 2635846 . + . ID=gene2453;Name=YPC_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12295;old_locus_tag=YPC_2722 NC_017265.1 Protein Homology CDS 2635400 2635846 . + 0 ID=cds2384;Parent=gene2453;Dbxref=Genbank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213062.1;transl_table=11 NC_017265.1 RefSeq gene 2635876 2638014 . + . ID=gene2454;Name=YPC_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12300;old_locus_tag=YPC_2723 NC_017265.1 Protein Homology CDS 2635876 2638014 . + 0 ID=cds2385;Parent=gene2454;Dbxref=Genbank:WP_002213063.1;Name=WP_002213063.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213063.1;transl_table=11 NC_017265.1 RefSeq gene 2638116 2638751 . - . ID=gene2455;Name=YPC_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12305;old_locus_tag=YPC_2724 NC_017265.1 Protein Homology CDS 2638116 2638751 . - 0 ID=cds2386;Parent=gene2455;Dbxref=Genbank:WP_002213064.1;Name=WP_002213064.1;gbkey=CDS;product=DNA transformation protein tfoX;protein_id=WP_002213064.1;transl_table=11 NC_017265.1 RefSeq gene 2638980 2639486 . + . ID=gene2456;Name=YPC_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12310;old_locus_tag=YPC_2725 NC_017265.1 Protein Homology CDS 2638980 2639486 . + 0 ID=cds2387;Parent=gene2456;Dbxref=Genbank:WP_002213065.1;Name=WP_002213065.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_002213065.1;transl_table=11 NC_017265.1 RefSeq gene 2639844 2640905 . + . ID=gene2457;Name=YPC_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12315;old_locus_tag=YPC_2726 NC_017265.1 Protein Homology CDS 2639844 2640905 . + 0 ID=cds2388;Parent=gene2457;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2640941 2641665 . + . ID=id215;gbkey=repeat_region NC_017265.1 RefSeq gene 2640950 2641105 . + . ID=gene2458;Name=YPC_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12320 NC_017265.1 Protein Homology CDS 2640950 2641105 . + 0 ID=cds2389;Parent=gene2458;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 2641095 2641553 . + . ID=gene2459;Name=YPC_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12325;old_locus_tag=YPC_2728 NC_017265.1 Protein Homology CDS 2641095 2641553 . + 0 ID=cds2390;Parent=gene2459;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 2641722 2642177 . - . ID=gene2460;Name=YPC_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12330;old_locus_tag=YPC_2729 NC_017265.1 Protein Homology CDS 2641722 2642177 . - 0 ID=cds2391;Parent=gene2460;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11 NC_017265.1 RefSeq gene 2642388 2644139 . + . ID=gene2461;Name=YPC_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12335;old_locus_tag=YPC_2730 NC_017265.1 Protein Homology CDS 2642388 2644139 . + 0 ID=cds2392;Parent=gene2461;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11 NC_017265.1 RefSeq gene 2644208 2644726 . + . ID=gene2462;Name=YPC_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12340;old_locus_tag=YPC_2731 NC_017265.1 Protein Homology CDS 2644208 2644726 . + 0 ID=cds2393;Parent=gene2462;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11 NC_017265.1 RefSeq gene 2644992 2645180 . - . ID=gene2463;Name=YPC_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12345 NC_017265.1 Protein Homology CDS 2644992 2645180 . - 0 ID=cds2394;Parent=gene2463;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11 NC_017265.1 RefSeq gene 2645426 2645800 . + . ID=gene2464;Name=YPC_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12350;old_locus_tag=YPC_2732 NC_017265.1 Protein Homology CDS 2645426 2645800 . + 0 ID=cds2395;Parent=gene2464;Dbxref=Genbank:WP_002211287.1;Name=WP_002211287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211287.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2645724 2647690 . + . ID=id216;gbkey=repeat_region NC_017265.1 RefSeq gene 2645814 2646836 . + . ID=gene2465;Name=YPC_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12355;old_locus_tag=YPC_2733 NC_017265.1 Protein Homology CDS 2645814 2646836 . + 0 ID=cds2396;Parent=gene2465;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 2646836 2647615 . + . ID=gene2466;Name=YPC_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12360;old_locus_tag=YPC_2734 NC_017265.1 Protein Homology CDS 2646836 2647615 . + 0 ID=cds2397;Parent=gene2466;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 2647685 2648659 . + . ID=gene2467;Name=YPC_RS12365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12365;old_locus_tag=YPC_2735;partial=true;pseudo=true;start_range=.,2647685 NC_017265.1 Protein Homology CDS 2647685 2648659 . + 0 ID=cds2398;Parent=gene2467;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=3-oxoacyl-ACP synthase;pseudo=true;start_range=.,2647685;transl_table=11 NC_017265.1 RefSeq repeat_region 2648664 2649384 . + . ID=id217;gbkey=repeat_region NC_017265.1 RefSeq gene 2648776 2649234 . - . ID=gene2468;Name=YPC_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12370;old_locus_tag=YPC_2736 NC_017265.1 Protein Homology CDS 2648776 2649234 . - 0 ID=cds2399;Parent=gene2468;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 2649224 2649379 . - . ID=gene2469;Name=YPC_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12375 NC_017265.1 Protein Homology CDS 2649224 2649379 . - 0 ID=cds2400;Parent=gene2469;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 2649432 2649599 . - . ID=gene2470;Name=YPC_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12380;old_locus_tag=YPC_2738 NC_017265.1 Protein Homology CDS 2649432 2649599 . - 0 ID=cds2401;Parent=gene2470;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NC_017265.1 RefSeq gene 2649680 2649820 . - . ID=gene2471;Name=YPC_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12385;old_locus_tag=YPC_2739 NC_017265.1 Protein Homology CDS 2649680 2649820 . - 0 ID=cds2402;Parent=gene2471;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11 NC_017265.1 RefSeq gene 2649869 2650447 . - . ID=gene2472;Name=YPC_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12390;old_locus_tag=YPC_2740 NC_017265.1 Protein Homology CDS 2649869 2650447 . - 0 ID=cds2403;Parent=gene2472;Dbxref=Genbank:WP_002211289.1;Name=WP_002211289.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211289.1;transl_table=11 NC_017265.1 RefSeq gene 2650444 2652096 . - . ID=gene2473;Name=YPC_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12395;old_locus_tag=YPC_2741 NC_017265.1 Protein Homology CDS 2650444 2652096 . - 0 ID=cds2404;Parent=gene2473;Dbxref=Genbank:WP_015683672.1;Name=WP_015683672.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_015683672.1;transl_table=11 NC_017265.1 RefSeq gene 2652083 2653300 . - . ID=gene2474;Name=YPC_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12400;old_locus_tag=YPC_2742 NC_017265.1 Protein Homology CDS 2652083 2653300 . - 0 ID=cds2405;Parent=gene2474;Dbxref=Genbank:WP_002354008.1;Name=WP_002354008.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_002354008.1;transl_table=11 NC_017265.1 RefSeq gene 2653498 2655411 . - . ID=gene2475;Name=YPC_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12405;old_locus_tag=YPC_2743 NC_017265.1 Protein Homology CDS 2653498 2655411 . - 0 ID=cds2406;Parent=gene2475;Dbxref=Genbank:WP_002211292.1;Name=WP_002211292.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211292.1;transl_table=11 NC_017265.1 RefSeq gene 2655417 2657537 . - . ID=gene2476;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=YPC_RS12410;old_locus_tag=YPC_2744 NC_017265.1 Protein Homology CDS 2655417 2657537 . - 0 ID=cds2407;Parent=gene2476;Dbxref=Genbank:WP_002211293.1;Name=WP_002211293.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_002211293.1;transl_table=11 NC_017265.1 RefSeq gene 2657640 2658749 . + . ID=gene2477;Name=YPC_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12415;old_locus_tag=YPC_2745 NC_017265.1 Protein Homology CDS 2657640 2658749 . + 0 ID=cds2408;Parent=gene2477;Dbxref=Genbank:WP_002363919.1;Name=WP_002363919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002363919.1;transl_table=11 NC_017265.1 RefSeq gene 2658775 2659326 . - . ID=gene2478;Name=YPC_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12420;old_locus_tag=YPC_2746 NC_017265.1 Protein Homology CDS 2658775 2659326 . - 0 ID=cds2409;Parent=gene2478;Dbxref=Genbank:WP_002211295.1;Name=WP_002211295.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_002211295.1;transl_table=11 NC_017265.1 RefSeq gene 2659509 2660519 . - . ID=gene2479;Name=YPC_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12425;old_locus_tag=YPC_2747 NC_017265.1 Protein Homology CDS 2659509 2660519 . - 0 ID=cds2410;Parent=gene2479;Dbxref=Genbank:WP_002211296.1;Name=WP_002211296.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11 NC_017265.1 RefSeq gene 2661137 2663752 . - . ID=gene2480;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YPC_RS12430;old_locus_tag=YPC_2749 NC_017265.1 Protein Homology CDS 2661137 2663752 . - 0 ID=cds2411;Parent=gene2480;Dbxref=Genbank:WP_002220013.1;Name=WP_002220013.1;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=WP_002220013.1;transl_table=11 NC_017265.1 RefSeq gene 2664468 2665673 . + . ID=gene2481;Name=YPC_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12435;old_locus_tag=YPC_2752 NC_017265.1 Protein Homology CDS 2664468 2665673 . + 0 ID=cds2412;Parent=gene2481;Dbxref=Genbank:WP_002228013.1;Name=WP_002228013.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NC_017265.1 RefSeq gene 2666172 2667572 . + . ID=gene2482;Name=YPC_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12440;old_locus_tag=YPC_2753 NC_017265.1 Protein Homology CDS 2666172 2667572 . + 0 ID=cds2413;Parent=gene2482;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NC_017265.1 RefSeq gene 2667873 2668952 . + . ID=gene2483;Name=YPC_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12445;old_locus_tag=YPC_2755 NC_017265.1 Protein Homology CDS 2667873 2668952 . + 0 ID=cds2414;Parent=gene2483;Dbxref=Genbank:WP_002354007.1;Name=WP_002354007.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_002354007.1;transl_table=11 NC_017265.1 RefSeq gene 2669209 2670399 . + . ID=gene2484;Name=YPC_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12450;old_locus_tag=YPC_2756 NC_017265.1 Protein Homology CDS 2669209 2670399 . + 0 ID=cds2415;Parent=gene2484;Dbxref=Genbank:WP_002211303.1;Name=WP_002211303.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2670453 2670624 . + . ID=id218;gbkey=repeat_region NC_017265.1 RefSeq gene 2670823 2671470 . - . ID=gene2485;Name=YPC_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12455;old_locus_tag=YPC_2758 NC_017265.1 Protein Homology CDS 2670823 2671470 . - 0 ID=cds2416;Parent=gene2485;Dbxref=Genbank:WP_002211304.1;Name=WP_002211304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211304.1;transl_table=11 NC_017265.1 RefSeq gene 2671531 2672079 . - . ID=gene2486;Name=YPC_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12460;old_locus_tag=YPC_2759 NC_017265.1 Protein Homology CDS 2671531 2672079 . - 0 ID=cds2417;Parent=gene2486;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11 NC_017265.1 RefSeq gene 2672303 2674159 . - . ID=gene2487;Name=YPC_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12465;old_locus_tag=YPC_2760 NC_017265.1 Protein Homology CDS 2672303 2674159 . - 0 ID=cds2418;Parent=gene2487;Dbxref=Genbank:WP_002217987.1;Name=WP_002217987.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002217987.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2674331 2675052 . + . ID=id219;gbkey=repeat_region NC_017265.1 RefSeq gene 2674443 2674901 . - . ID=gene2488;Name=YPC_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12470;old_locus_tag=YPC_2761 NC_017265.1 Protein Homology CDS 2674443 2674901 . - 0 ID=cds2419;Parent=gene2488;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 2674891 2675073 . - . ID=gene2489;Name=YPC_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12475 NC_017265.1 Protein Homology CDS 2674891 2675073 . - 0 ID=cds2420;Parent=gene2489;Dbxref=Genbank:WP_002217988.1;Name=WP_002217988.1;gbkey=CDS;product=invasin;protein_id=WP_002217988.1;transl_table=11 NC_017265.1 RefSeq gene 2675117 2679574 . - . ID=gene2490;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YPC_RS12480;old_locus_tag=YPC_2763 NC_017265.1 Protein Homology CDS 2675117 2679574 . - 0 ID=cds2421;Parent=gene2490;Dbxref=Genbank:WP_002211308.1;Name=WP_002211308.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_002211308.1;transl_table=11 NC_017265.1 RefSeq gene 2679571 2680299 . - . ID=gene2491;Name=YPC_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12485;old_locus_tag=YPC_2764 NC_017265.1 Protein Homology CDS 2679571 2680299 . - 0 ID=cds2422;Parent=gene2491;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11 NC_017265.1 RefSeq gene 2680280 2681602 . - . ID=gene2492;Name=YPC_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12490;old_locus_tag=YPC_2765 NC_017265.1 Protein Homology CDS 2680280 2681602 . - 0 ID=cds2423;Parent=gene2492;Dbxref=Genbank:WP_002211310.1;Name=WP_002211310.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NC_017265.1 RefSeq gene 2681599 2682384 . - . ID=gene2493;Name=YPC_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12495;old_locus_tag=YPC_2766 NC_017265.1 Protein Homology CDS 2681599 2682384 . - 0 ID=cds2424;Parent=gene2493;Dbxref=Genbank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_002211311.1;transl_table=11 NC_017265.1 RefSeq gene 2682629 2682781 . + . ID=gene2494;Name=YPC_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12500 NC_017265.1 Protein Homology CDS 2682629 2682781 . + 0 ID=cds2425;Parent=gene2494;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11 NC_017265.1 RefSeq gene 2683157 2684050 . - . ID=gene2495;Name=YPC_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12505;old_locus_tag=YPC_2768 NC_017265.1 Protein Homology CDS 2683157 2684050 . - 0 ID=cds2426;Parent=gene2495;Dbxref=Genbank:WP_002211313.1;Name=WP_002211313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211313.1;transl_table=11 NC_017265.1 RefSeq gene 2684111 2684314 . + . ID=gene2496;Name=YPC_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12510 NC_017265.1 Protein Homology CDS 2684111 2684314 . + 0 ID=cds2427;Parent=gene2496;Dbxref=Genbank:WP_002216254.1;Name=WP_002216254.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216254.1;transl_table=11 NC_017265.1 RefSeq gene 2684413 2685165 . - . ID=gene2497;Name=YPC_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12515;old_locus_tag=YPC_2769 NC_017265.1 Protein Homology CDS 2684413 2685165 . - 0 ID=cds2428;Parent=gene2497;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NC_017265.1 RefSeq gene 2685162 2685344 . - . ID=gene2498;Name=YPC_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12520;old_locus_tag=YPC_2770 NC_017265.1 Protein Homology CDS 2685162 2685344 . - 0 ID=cds2429;Parent=gene2498;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11 NC_017265.1 RefSeq gene 2685892 2686101 . - . ID=gene2499;Name=YPC_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12525;old_locus_tag=YPC_2772 NC_017265.1 Protein Homology CDS 2685892 2686101 . - 0 ID=cds2430;Parent=gene2499;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NC_017265.1 RefSeq gene 2686828 2688255 . + . ID=gene2500;Name=YPC_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12530;old_locus_tag=YPC_2773 NC_017265.1 Protein Homology CDS 2686828 2688255 . + 0 ID=cds2431;Parent=gene2500;Dbxref=Genbank:WP_002226050.1;Name=WP_002226050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002226050.1;transl_table=11 NC_017265.1 RefSeq gene 2688263 2689249 . - . ID=gene2501;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YPC_RS12535;old_locus_tag=YPC_2774 NC_017265.1 Protein Homology CDS 2688263 2689249 . - 0 ID=cds2432;Parent=gene2501;Dbxref=Genbank:WP_002211319.1;Name=WP_002211319.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NC_017265.1 RefSeq gene 2689246 2690994 . - . ID=gene2502;Name=YPC_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12540;old_locus_tag=YPC_2775 NC_017265.1 Protein Homology CDS 2689246 2690994 . - 0 ID=cds2433;Parent=gene2502;Dbxref=Genbank:WP_002211320.1;Name=WP_002211320.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_002211320.1;transl_table=11 NC_017265.1 RefSeq gene 2691030 2693320 . - . ID=gene2503;Name=YPC_RS12545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12545;old_locus_tag=YPC_2776;pseudo=true NC_017265.1 Protein Homology CDS 2691030 2693320 . - 0 ID=cds2434;Parent=gene2503;exception=annotated by transcript or proteomic data;gbkey=CDS;product=competence protein ComEC;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2693581 2693883 . + . ID=gene2504;Name=YPC_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12550 NC_017265.1 Protein Homology CDS 2693581 2693883 . + 0 ID=cds2435;Parent=gene2504;Dbxref=Genbank:WP_002430095.1;Name=WP_002430095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430095.1;transl_table=11 NC_017265.1 RefSeq gene 2693867 2694151 . - . ID=gene2505;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YPC_RS12555;old_locus_tag=YPC_2778 NC_017265.1 Protein Homology CDS 2693867 2694151 . - 0 ID=cds2436;Parent=gene2505;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NC_017265.1 RefSeq gene 2694212 2695885 . - . ID=gene2506;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YPC_RS12560;old_locus_tag=YPC_2779 NC_017265.1 Protein Homology CDS 2694212 2695885 . - 0 ID=cds2437;Parent=gene2506;Dbxref=Genbank:WP_002211323.1;Name=WP_002211323.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_002211323.1;transl_table=11 NC_017265.1 RefSeq gene 2696059 2696751 . - . ID=gene2507;Name=YPC_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12565;old_locus_tag=YPC_2780 NC_017265.1 Protein Homology CDS 2696059 2696751 . - 0 ID=cds2438;Parent=gene2507;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11 NC_017265.1 RefSeq gene 2697064 2698350 . - . ID=gene2508;Name=YPC_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12570;old_locus_tag=YPC_2781 NC_017265.1 Protein Homology CDS 2697064 2698350 . - 0 ID=cds2439;Parent=gene2508;Dbxref=Genbank:WP_002211325.1;Name=WP_002211325.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002211325.1;transl_table=11 NC_017265.1 RefSeq gene 2698513 2699598 . - . ID=gene2509;Name=YPC_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12575;old_locus_tag=YPC_2782 NC_017265.1 Protein Homology CDS 2698513 2699598 . - 0 ID=cds2440;Parent=gene2509;Dbxref=Genbank:WP_002211326.1;Name=WP_002211326.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_002211326.1;transl_table=11 NC_017265.1 RefSeq gene 2699965 2701812 . - . ID=gene2510;Name=YPC_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12580 NC_017265.1 Protein Homology CDS 2699965 2701812 . - 0 ID=cds2441;Parent=gene2510;Dbxref=Genbank:WP_002211327.1;Name=WP_002211327.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211327.1;transl_table=11 NC_017265.1 RefSeq gene 2701833 2702927 . - . ID=gene2511;Name=YPC_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12585 NC_017265.1 Protein Homology CDS 2701833 2702927 . - 0 ID=cds2442;Parent=gene2511;Dbxref=Genbank:WP_002211328.1;Name=WP_002211328.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002211328.1;transl_table=11 NC_017265.1 RefSeq gene 2703196 2704233 . - . ID=gene2512;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YPC_RS12590;old_locus_tag=YPC_2785 NC_017265.1 Protein Homology CDS 2703196 2704233 . - 0 ID=cds2443;Parent=gene2512;Dbxref=Genbank:WP_002211329.1;Name=WP_002211329.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=WP_002211329.1;transl_table=11 NC_017265.1 RefSeq gene 2704382 2706148 . + . ID=gene2513;Name=YPC_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12595;old_locus_tag=YPC_2786 NC_017265.1 Protein Homology CDS 2704382 2706148 . + 0 ID=cds2444;Parent=gene2513;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11 NC_017265.1 RefSeq gene 2706845 2707702 . + . ID=gene2514;Name=YPC_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12600;old_locus_tag=YPC_2788 NC_017265.1 Protein Homology CDS 2706845 2707702 . + 0 ID=cds2445;Parent=gene2514;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NC_017265.1 RefSeq gene 2707758 2710040 . + . ID=gene2515;Name=YPC_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12605;old_locus_tag=YPC_2789 NC_017265.1 Protein Homology CDS 2707758 2710040 . + 0 ID=cds2446;Parent=gene2515;Dbxref=Genbank:WP_002211332.1;Name=WP_002211332.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=keto-acid formate acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NC_017265.1 RefSeq gene 2710158 2710832 . - . ID=gene2516;Name=YPC_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12610;old_locus_tag=YPC_2790 NC_017265.1 Protein Homology CDS 2710158 2710832 . - 0 ID=cds2447;Parent=gene2516;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11 NC_017265.1 RefSeq gene 2711819 2712553 . + . ID=gene2517;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YPC_RS12615;old_locus_tag=YPC_2791 NC_017265.1 Protein Homology CDS 2711819 2712553 . + 0 ID=cds2448;Parent=gene2517;Dbxref=Genbank:WP_002211334.1;Name=WP_002211334.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating protein;protein_id=WP_002211334.1;transl_table=11 NC_017265.1 RefSeq gene 2712707 2713315 . - . ID=gene2518;Name=YPC_RS12620;end_range=2713315,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12620;old_locus_tag=YPC_2792;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 2712707 2713315 . - 0 ID=cds2449;Parent=gene2518;end_range=2713315,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 2713310 2715267 . + . ID=id220;gbkey=repeat_region NC_017265.1 RefSeq gene 2713399 2714421 . + . ID=gene2519;Name=YPC_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12625;old_locus_tag=YPC_2793 NC_017265.1 Protein Homology CDS 2713399 2714421 . + 0 ID=cds2450;Parent=gene2519;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 2714421 2715200 . + . ID=gene2520;Name=YPC_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12630;old_locus_tag=YPC_2794 NC_017265.1 Protein Homology CDS 2714421 2715200 . + 0 ID=cds2451;Parent=gene2520;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 2715251 2715814 . - . ID=gene2521;Name=YPC_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12635;old_locus_tag=YPC_2795 NC_017265.1 Protein Homology CDS 2715251 2715814 . - 0 ID=cds2452;Parent=gene2521;Dbxref=Genbank:WP_002223476.1;Name=WP_002223476.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002223476.1;transl_table=11 NC_017265.1 RefSeq gene 2716069 2717361 . - . ID=gene2522;Name=YPC_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12640;old_locus_tag=YPC_2796 NC_017265.1 Protein Homology CDS 2716069 2717361 . - 0 ID=cds2453;Parent=gene2522;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NC_017265.1 RefSeq gene 2717603 2718946 . - . ID=gene2523;Name=YPC_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12645;old_locus_tag=YPC_2797 NC_017265.1 Protein Homology CDS 2717603 2718946 . - 0 ID=cds2454;Parent=gene2523;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11 NC_017265.1 RefSeq gene 2718957 2719565 . - . ID=gene2524;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YPC_RS12650;old_locus_tag=YPC_2798 NC_017265.1 Protein Homology CDS 2718957 2719565 . - 0 ID=cds2455;Parent=gene2524;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11 NC_017265.1 RefSeq gene 2719758 2723675 . - . ID=gene2525;Name=YPC_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12655;old_locus_tag=YPC_2799 NC_017265.1 Protein Homology CDS 2719758 2723675 . - 0 ID=cds2456;Parent=gene2525;Dbxref=Genbank:WP_002211339.1;Name=WP_002211339.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_002211339.1;transl_table=11 NC_017265.1 RefSeq gene 2723798 2724292 . - . ID=gene2526;Name=YPC_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12660;old_locus_tag=YPC_2801 NC_017265.1 Protein Homology CDS 2723798 2724292 . - 0 ID=cds2457;Parent=gene2526;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11 NC_017265.1 RefSeq gene 2725059 2726021 . + . ID=gene2527;Name=YPC_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12665;old_locus_tag=YPC_2802 NC_017265.1 Protein Homology CDS 2725059 2726021 . + 0 ID=cds2458;Parent=gene2527;Dbxref=Genbank:WP_002211341.1;Name=WP_002211341.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_002211341.1;transl_table=11 NC_017265.1 RefSeq gene 2726126 2726263 . - . ID=gene2528;Name=YPC_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12670;old_locus_tag=YPC_2803 NC_017265.1 Protein Homology CDS 2726126 2726263 . - 0 ID=cds2459;Parent=gene2528;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11 NC_017265.1 RefSeq gene 2726480 2728246 . + . ID=gene2529;Name=YPC_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12675;old_locus_tag=YPC_2804 NC_017265.1 Protein Homology CDS 2726480 2728246 . + 0 ID=cds2460;Parent=gene2529;Dbxref=Genbank:WP_002217690.1;Name=WP_002217690.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002217690.1;transl_table=11 NC_017265.1 RefSeq gene 2728249 2729973 . + . ID=gene2530;Name=YPC_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12680;old_locus_tag=YPC_2805 NC_017265.1 Protein Homology CDS 2728249 2729973 . + 0 ID=cds2461;Parent=gene2530;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11 NC_017265.1 RefSeq gene 2730192 2730901 . + . ID=gene2531;Name=YPC_RS12685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12685;pseudo=true NC_017265.1 Protein Homology CDS 2730192 2730901 . + 0 ID=cds2462;Parent=gene2531;exception=annotated by transcript or proteomic data;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2731067 2731285 . + . ID=gene2532;Name=YPC_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12690;old_locus_tag=YPC_2809 NC_017265.1 Protein Homology CDS 2731067 2731285 . + 0 ID=cds2463;Parent=gene2532;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2731546 2732268 . + . ID=id221;gbkey=repeat_region NC_017265.1 RefSeq gene 2731657 2732115 . - . ID=gene2533;Name=YPC_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12695;old_locus_tag=YPC_2810 NC_017265.1 Protein Homology CDS 2731657 2732115 . - 0 ID=cds2464;Parent=gene2533;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 2732393 2734668 . - . ID=gene2534;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=pseudogene;locus_tag=YPC_RS12700;pseudo=true NC_017265.1 Protein Homology CDS 2732393 2734668 . - 0 ID=cds2465;Parent=gene2534;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=clpA;product=Clp protease ClpA;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2734694 2735014 . - . ID=gene2535;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YPC_RS12705;old_locus_tag=YPC_2814 NC_017265.1 Protein Homology CDS 2734694 2735014 . - 0 ID=cds2466;Parent=gene2535;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11 NC_017265.1 RefSeq gene 2735375 2735638 . + . ID=gene2536;Name=YPC_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12710;old_locus_tag=YPC_2816 NC_017265.1 Protein Homology CDS 2735375 2735638 . + 0 ID=cds2467;Parent=gene2536;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11 NC_017265.1 RefSeq gene 2735919 2737868 . - . ID=gene2537;Name=YPC_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12715;old_locus_tag=YPC_2817 NC_017265.1 Protein Homology CDS 2735919 2737868 . - 0 ID=cds2468;Parent=gene2537;Dbxref=Genbank:WP_002211351.1;Name=WP_002211351.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002211351.1;transl_table=11 NC_017265.1 RefSeq gene 2737868 2738980 . - . ID=gene2538;Name=YPC_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12720;old_locus_tag=YPC_2818 NC_017265.1 Protein Homology CDS 2737868 2738980 . - 0 ID=cds2469;Parent=gene2538;Dbxref=Genbank:WP_002216705.1;Name=WP_002216705.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11 NC_017265.1 RefSeq gene 2739217 2740164 . + . ID=gene2539;Name=YPC_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12725;old_locus_tag=YPC_2821 NC_017265.1 Protein Homology CDS 2739217 2740164 . + 0 ID=cds2470;Parent=gene2539;Dbxref=Genbank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211355.1;transl_table=11 NC_017265.1 RefSeq gene 2740301 2741968 . - . ID=gene2540;Name=YPC_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12730;old_locus_tag=YPC_2822 NC_017265.1 Protein Homology CDS 2740301 2741968 . - 0 ID=cds2471;Parent=gene2540;Dbxref=Genbank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211356.1;transl_table=11 NC_017265.1 RefSeq gene 2742321 2743217 . + . ID=gene2541;Name=YPC_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12735;old_locus_tag=YPC_2823 NC_017265.1 Protein Homology CDS 2742321 2743217 . + 0 ID=cds2472;Parent=gene2541;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11 NC_017265.1 RefSeq gene 2743419 2745071 . + . ID=gene2542;Name=YPC_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12740;old_locus_tag=YPC_2824 NC_017265.1 Protein Homology CDS 2743419 2745071 . + 0 ID=cds2473;Parent=gene2542;Dbxref=Genbank:WP_002211359.1;Name=WP_002211359.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_002211359.1;transl_table=11 NC_017265.1 RefSeq gene 2745185 2746207 . + . ID=gene2543;Name=YPC_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12745;old_locus_tag=YPC_2825 NC_017265.1 Protein Homology CDS 2745185 2746207 . + 0 ID=cds2474;Parent=gene2543;Dbxref=Genbank:WP_002211360.1;Name=WP_002211360.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211360.1;transl_table=11 NC_017265.1 RefSeq gene 2746351 2748072 . + . ID=gene2544;Name=YPC_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12750;old_locus_tag=YPC_2826 NC_017265.1 Protein Homology CDS 2746351 2748072 . + 0 ID=cds2475;Parent=gene2544;Dbxref=Genbank:WP_015683675.1;Name=WP_015683675.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_015683675.1;transl_table=11 NC_017265.1 RefSeq gene 2748421 2749440 . + . ID=gene2545;Name=YPC_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12755;old_locus_tag=YPC_2828 NC_017265.1 Protein Homology CDS 2748421 2749440 . + 0 ID=cds2476;Parent=gene2545;Dbxref=Genbank:WP_002211362.1;Name=WP_002211362.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_002211362.1;transl_table=11 NC_017265.1 RefSeq gene 2749437 2750927 . + . ID=gene2546;Name=YPC_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12760;old_locus_tag=YPC_2829 NC_017265.1 Protein Homology CDS 2749437 2750927 . + 0 ID=cds2477;Parent=gene2546;Dbxref=Genbank:WP_002211363.1;Name=WP_002211363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211363.1;transl_table=11 NC_017265.1 RefSeq gene 2751027 2752034 . + . ID=gene2547;Name=YPC_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12765;old_locus_tag=YPC_2830 NC_017265.1 Protein Homology CDS 2751027 2752034 . + 0 ID=cds2478;Parent=gene2547;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11 NC_017265.1 RefSeq gene 2752131 2752706 . + . ID=gene2548;Name=YPC_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12770;old_locus_tag=YPC_2831 NC_017265.1 Protein Homology CDS 2752131 2752706 . + 0 ID=cds2479;Parent=gene2548;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NC_017265.1 RefSeq gene 2752876 2753436 . + . ID=gene2549;Name=YPC_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12775;old_locus_tag=YPC_2833 NC_017265.1 Protein Homology CDS 2752876 2753436 . + 0 ID=cds2480;Parent=gene2549;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NC_017265.1 RefSeq gene 2753732 2754460 . + . ID=gene2550;Name=YPC_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12780;old_locus_tag=YPC_2834 NC_017265.1 Protein Homology CDS 2753732 2754460 . + 0 ID=cds2481;Parent=gene2550;Dbxref=Genbank:WP_002228008.1;Name=WP_002228008.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002228008.1;transl_table=11 NC_017265.1 RefSeq gene 2754481 2755212 . + . ID=gene2551;Name=YPC_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12785;old_locus_tag=YPC_2835 NC_017265.1 Protein Homology CDS 2754481 2755212 . + 0 ID=cds2482;Parent=gene2551;Dbxref=Genbank:WP_002211368.1;Name=WP_002211368.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NC_017265.1 RefSeq gene 2755224 2755940 . + . ID=gene2552;Name=YPC_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12790;old_locus_tag=YPC_2836 NC_017265.1 Protein Homology CDS 2755224 2755940 . + 0 ID=cds2483;Parent=gene2552;Dbxref=Genbank:WP_002211369.1;Name=WP_002211369.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_002211369.1;transl_table=11 NC_017265.1 RefSeq gene 2755940 2756608 . + . ID=gene2553;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YPC_RS12795;old_locus_tag=YPC_2837 NC_017265.1 Protein Homology CDS 2755940 2756608 . + 0 ID=cds2484;Parent=gene2553;Dbxref=Genbank:WP_002211370.1;Name=WP_002211370.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_002211370.1;transl_table=11 NC_017265.1 RefSeq gene 2756798 2757643 . - . ID=gene2554;Name=YPC_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12805;old_locus_tag=YPC_2839 NC_017265.1 Protein Homology CDS 2756798 2757643 . - 0 ID=cds2485;Parent=gene2554;Dbxref=Genbank:WP_015683676.1;Name=WP_015683676.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683676.1;transl_table=11 NC_017265.1 RefSeq gene 2757640 2759010 . - . ID=gene2555;Name=YPC_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12810;old_locus_tag=YPC_2840 NC_017265.1 Protein Homology CDS 2757640 2759010 . - 0 ID=cds2486;Parent=gene2555;Dbxref=Genbank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211373.1;transl_table=11 NC_017265.1 RefSeq gene 2759003 2759800 . - . ID=gene2556;Name=YPC_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12815;old_locus_tag=YPC_2841 NC_017265.1 Protein Homology CDS 2759003 2759800 . - 0 ID=cds2487;Parent=gene2556;Dbxref=Genbank:WP_002211374.1;Name=WP_002211374.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_002211374.1;transl_table=11 NC_017265.1 RefSeq gene 2759788 2760573 . - . ID=gene2557;Name=YPC_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12820;old_locus_tag=YPC_2842 NC_017265.1 Protein Homology CDS 2759788 2760573 . - 0 ID=cds2488;Parent=gene2557;Dbxref=Genbank:WP_002211375.1;Name=WP_002211375.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002211375.1;transl_table=11 NC_017265.1 RefSeq gene 2760570 2761626 . - . ID=gene2558;Name=YPC_RS12825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12825;pseudo=true NC_017265.1 Protein Homology CDS 2760570 2761626 . - 0 ID=cds2489;Parent=gene2558;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron-siderophore ABC transporter permease;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2761626 2762717 . - . ID=gene2559;Name=YPC_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12830;old_locus_tag=YPC_2845 NC_017265.1 Protein Homology CDS 2761626 2762717 . - 0 ID=cds2490;Parent=gene2559;Dbxref=Genbank:WP_002211377.1;Name=WP_002211377.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002211377.1;transl_table=11 NC_017265.1 RefSeq gene 2763129 2764055 . - . ID=gene2560;Name=YPC_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12835;old_locus_tag=YPC_2846 NC_017265.1 Protein Homology CDS 2763129 2764055 . - 0 ID=cds2491;Parent=gene2560;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11 NC_017265.1 RefSeq gene 2764396 2764626 . - . ID=gene2561;Name=YPC_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12840;old_locus_tag=YPC_2847 NC_017265.1 Protein Homology CDS 2764396 2764626 . - 0 ID=cds2492;Parent=gene2561;Dbxref=Genbank:WP_002228004.1;Name=WP_002228004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228004.1;transl_table=11 NC_017265.1 RefSeq gene 2764638 2764754 . - . ID=gene2562;Name=YPC_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12845;old_locus_tag=YPC_2848 NC_017265.1 Protein Homology CDS 2764638 2764754 . - 0 ID=cds2493;Parent=gene2562;Dbxref=Genbank:WP_002211379.1;Name=WP_002211379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211379.1;transl_table=11 NC_017265.1 RefSeq gene 2764874 2765605 . + . ID=gene2563;Name=YPC_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12850;old_locus_tag=YPC_2849 NC_017265.1 Protein Homology CDS 2764874 2765605 . + 0 ID=cds2494;Parent=gene2563;Dbxref=Genbank:WP_002220045.1;Name=WP_002220045.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11 NC_017265.1 RefSeq gene 2765732 2766862 . - . ID=gene2564;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=YPC_RS12855;old_locus_tag=YPC_2850 NC_017265.1 Protein Homology CDS 2765732 2766862 . - 0 ID=cds2495;Parent=gene2564;Dbxref=Genbank:WP_002208756.1;Name=WP_002208756.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_002208756.1;transl_table=11 NC_017265.1 RefSeq gene 2766946 2767410 . - . ID=gene2565;Name=YPC_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12860;old_locus_tag=YPC_2851 NC_017265.1 Protein Homology CDS 2766946 2767410 . - 0 ID=cds2496;Parent=gene2565;Dbxref=Genbank:WP_015683677.1;Name=WP_015683677.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683677.1;transl_table=11 NC_017265.1 RefSeq gene 2767535 2768380 . - . ID=gene2566;Name=YPC_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12865;old_locus_tag=YPC_2852 NC_017265.1 Protein Homology CDS 2767535 2768380 . - 0 ID=cds2497;Parent=gene2566;Dbxref=Genbank:WP_002208758.1;Name=WP_002208758.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208758.1;transl_table=11 NC_017265.1 RefSeq gene 2768377 2769342 . - . ID=gene2567;Name=YPC_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12870;old_locus_tag=YPC_2853 NC_017265.1 Protein Homology CDS 2768377 2769342 . - 0 ID=cds2498;Parent=gene2567;Dbxref=Genbank:WP_002208759.1;Name=WP_002208759.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208759.1;transl_table=11 NC_017265.1 RefSeq gene 2769367 2770500 . - . ID=gene2568;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YPC_RS12875;old_locus_tag=YPC_2854 NC_017265.1 Protein Homology CDS 2769367 2770500 . - 0 ID=cds2499;Parent=gene2568;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11 NC_017265.1 RefSeq gene 2770671 2771780 . - . ID=gene2569;Name=YPC_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12880;old_locus_tag=YPC_2855 NC_017265.1 Protein Homology CDS 2770671 2771780 . - 0 ID=cds2500;Parent=gene2569;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11 NC_017265.1 RefSeq gene 2772298 2772783 . - . ID=gene2570;Name=YPC_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12885;old_locus_tag=YPC_2856 NC_017265.1 Protein Homology CDS 2772298 2772783 . - 0 ID=cds2501;Parent=gene2570;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11 NC_017265.1 RefSeq gene 2772790 2772909 . - . ID=gene2571;Name=YPC_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12890 NC_017265.1 Protein Homology CDS 2772790 2772909 . - 0 ID=cds2502;Parent=gene2571;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11 NC_017265.1 RefSeq gene 2772925 2773239 . - . ID=gene2572;Name=YPC_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12895;old_locus_tag=YPC_2857 NC_017265.1 Protein Homology CDS 2772925 2773239 . - 0 ID=cds2503;Parent=gene2572;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11 NC_017265.1 RefSeq gene 2773702 2773965 . + . ID=gene2573;Name=YPC_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12900;old_locus_tag=YPC_2858 NC_017265.1 Protein Homology CDS 2773702 2773965 . + 0 ID=cds2504;Parent=gene2573;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NC_017265.1 RefSeq gene 2774375 2776063 . + . ID=gene2574;Name=YPC_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12905;old_locus_tag=YPC_2859 NC_017265.1 Protein Homology CDS 2774375 2776063 . + 0 ID=cds2505;Parent=gene2574;Dbxref=Genbank:WP_002208766.1;Name=WP_002208766.1;gbkey=CDS;product=transporter;protein_id=WP_002208766.1;transl_table=11 NC_017265.1 RefSeq gene 2776540 2777211 . + . ID=gene2575;Name=YPC_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12910;old_locus_tag=YPC_2861 NC_017265.1 Protein Homology CDS 2776540 2777211 . + 0 ID=cds2506;Parent=gene2575;Dbxref=Genbank:WP_002208767.1;Name=WP_002208767.1;gbkey=CDS;product=phosphoesterase;protein_id=WP_002208767.1;transl_table=11 NC_017265.1 RefSeq gene 2777211 2777816 . + . ID=gene2576;Name=YPC_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12915;old_locus_tag=YPC_2862 NC_017265.1 Protein Homology CDS 2777211 2777816 . + 0 ID=cds2507;Parent=gene2576;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11 NC_017265.1 RefSeq gene 2778074 2778745 . + . ID=gene2577;Name=YPC_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12920;old_locus_tag=YPC_2863 NC_017265.1 Protein Homology CDS 2778074 2778745 . + 0 ID=cds2508;Parent=gene2577;Dbxref=Genbank:WP_002208769.1;Name=WP_002208769.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NC_017265.1 RefSeq gene 2778975 2779739 . + . ID=gene2578;Name=YPC_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12925;old_locus_tag=YPC_2864 NC_017265.1 Protein Homology CDS 2778975 2779739 . + 0 ID=cds2509;Parent=gene2578;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11 NC_017265.1 RefSeq gene 2780839 2782140 . + . ID=gene2579;Name=YPC_RS12930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12930;pseudo=true NC_017265.1 Protein Homology CDS 2780839 2782140 . + 0 ID=cds2510;Parent=gene2579;gbkey=CDS;product=serine/threonine protein kinase;pseudo=true;transl_except=(pos:2781403..2781405%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 2782137 2782289 . - . ID=gene2580;Name=YPC_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12935 NC_017265.1 Protein Homology CDS 2782137 2782289 . - 0 ID=cds2511;Parent=gene2580;Dbxref=Genbank:WP_002215444.1;Name=WP_002215444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215444.1;transl_table=11 NC_017265.1 RefSeq gene 2782580 2783785 . - . ID=gene2581;Name=YPC_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12940;old_locus_tag=YPC_2870 NC_017265.1 Protein Homology CDS 2782580 2783785 . - 0 ID=cds2512;Parent=gene2581;Dbxref=Genbank:WP_015683680.1;Name=WP_015683680.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_015683680.1;transl_table=11 NC_017265.1 RefSeq gene 2784120 2784791 . - . ID=gene2582;Name=YPC_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12945;old_locus_tag=YPC_2871 NC_017265.1 Protein Homology CDS 2784120 2784791 . - 0 ID=cds2513;Parent=gene2582;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NC_017265.1 RefSeq gene 2784788 2785774 . - . ID=gene2583;Name=YPC_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12950;old_locus_tag=YPC_2872 NC_017265.1 Protein Homology CDS 2784788 2785774 . - 0 ID=cds2514;Parent=gene2583;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NC_017265.1 RefSeq gene 2785771 2786595 . - . ID=gene2584;Name=YPC_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12955;old_locus_tag=YPC_2873 NC_017265.1 Protein Homology CDS 2785771 2786595 . - 0 ID=cds2515;Parent=gene2584;Dbxref=Genbank:WP_002208777.1;Name=WP_002208777.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_002208777.1;transl_table=11 NC_017265.1 RefSeq gene 2786823 2787890 . - . ID=gene2585;Name=YPC_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12960;old_locus_tag=YPC_2874 NC_017265.1 Protein Homology CDS 2786823 2787890 . - 0 ID=cds2516;Parent=gene2585;Dbxref=Genbank:WP_002208778.1;Name=WP_002208778.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_002208778.1;transl_table=11 NC_017265.1 RefSeq gene 2788377 2789027 . + . ID=gene2586;Name=YPC_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12965;old_locus_tag=YPC_2875 NC_017265.1 Protein Homology CDS 2788377 2789027 . + 0 ID=cds2517;Parent=gene2586;Dbxref=Genbank:WP_002215448.1;Name=WP_002215448.1;gbkey=CDS;product=hydrolase;protein_id=WP_002215448.1;transl_table=11 NC_017265.1 RefSeq gene 2789190 2789810 . + . ID=gene2587;Name=YPC_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12970;old_locus_tag=YPC_2877 NC_017265.1 Protein Homology CDS 2789190 2789810 . + 0 ID=cds2518;Parent=gene2587;Dbxref=Genbank:WP_002208781.1;Name=WP_002208781.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002208781.1;transl_table=11 NC_017265.1 RefSeq gene 2790080 2792077 . - . ID=gene2588;Name=YPC_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12975;old_locus_tag=YPC_2878 NC_017265.1 Protein Homology CDS 2790080 2792077 . - 0 ID=cds2519;Parent=gene2588;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NC_017265.1 RefSeq gene 2792337 2793125 . - . ID=gene2589;Name=YPC_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12980;old_locus_tag=YPC_2879 NC_017265.1 Protein Homology CDS 2792337 2793125 . - 0 ID=cds2520;Parent=gene2589;Dbxref=Genbank:WP_015683682.1;Name=WP_015683682.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_015683682.1;transl_table=11 NC_017265.1 RefSeq gene 2793122 2794204 . - . ID=gene2590;Name=YPC_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12985;old_locus_tag=YPC_2880 NC_017265.1 Protein Homology CDS 2793122 2794204 . - 0 ID=cds2521;Parent=gene2590;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NC_017265.1 RefSeq gene 2794399 2795544 . - . ID=gene2591;Name=YPC_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS12990;old_locus_tag=YPC_2881 NC_017265.1 Protein Homology CDS 2794399 2795544 . - 0 ID=cds2522;Parent=gene2591;Dbxref=Genbank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208785.1;transl_table=11 NC_017265.1 RefSeq gene 2795830 2797340 . - . ID=gene2592;Name=YPC_RS12995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS12995;pseudo=true NC_017265.1 Protein Homology CDS 2795830 2797340 . - 0 ID=cds2523;Parent=gene2592;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lysine transporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2797598 2798470 . - . ID=gene2593;Name=YPC_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13000;old_locus_tag=YPC_2884 NC_017265.1 Protein Homology CDS 2797598 2798470 . - 0 ID=cds2524;Parent=gene2593;Dbxref=Genbank:WP_002208788.1;Name=WP_002208788.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208788.1;transl_table=11 NC_017265.1 RefSeq gene 2799128 2800216 . + . ID=gene2594;Name=YPC_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13005;old_locus_tag=YPC_2885 NC_017265.1 Protein Homology CDS 2799128 2800216 . + 0 ID=cds2525;Parent=gene2594;Dbxref=Genbank:WP_002208790.1;Name=WP_002208790.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208790.1;transl_table=11 NC_017265.1 RefSeq gene 2800380 2801237 . + . ID=gene2595;Name=YPC_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13010;old_locus_tag=YPC_2886 NC_017265.1 Protein Homology CDS 2800380 2801237 . + 0 ID=cds2526;Parent=gene2595;Dbxref=Genbank:WP_002208791.1;Name=WP_002208791.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_002208791.1;transl_table=11 NC_017265.1 RefSeq gene 2801324 2803795 . - . ID=gene2596;Name=YPC_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13015;old_locus_tag=YPC_2887 NC_017265.1 Protein Homology CDS 2801324 2803795 . - 0 ID=cds2527;Parent=gene2596;Dbxref=Genbank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;product=usher protein;protein_id=WP_002208792.1;transl_table=11 NC_017265.1 RefSeq gene 2803879 2804700 . - . ID=gene2597;Name=YPC_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13020;old_locus_tag=YPC_2888 NC_017265.1 Protein Homology CDS 2803879 2804700 . - 0 ID=cds2528;Parent=gene2597;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NC_017265.1 RefSeq gene 2804827 2805303 . - . ID=gene2598;Name=YPC_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13025;old_locus_tag=YPC_2889 NC_017265.1 Protein Homology CDS 2804827 2805303 . - 0 ID=cds2529;Parent=gene2598;Dbxref=Genbank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_002208794.1;transl_table=11 NC_017265.1 RefSeq gene 2805848 2806336 . - . ID=gene2599;Name=YPC_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13030;old_locus_tag=YPC_2890 NC_017265.1 Protein Homology CDS 2805848 2806336 . - 0 ID=cds2530;Parent=gene2599;Dbxref=Genbank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;product=protein PsaF;protein_id=WP_002216523.1;transl_table=11 NC_017265.1 RefSeq gene 2806333 2806977 . - . ID=gene2600;Name=YPC_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13035;old_locus_tag=YPC_2891 NC_017265.1 Protein Homology CDS 2806333 2806977 . - 0 ID=cds2531;Parent=gene2600;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11 NC_017265.1 RefSeq gene 2807302 2809002 . - . ID=gene2601;Name=YPC_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13040;old_locus_tag=YPC_2892 NC_017265.1 Protein Homology CDS 2807302 2809002 . - 0 ID=cds2532;Parent=gene2601;Dbxref=Genbank:WP_002208797.1;Name=WP_002208797.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_002208797.1;transl_table=11 NC_017265.1 RefSeq gene 2809017 2809955 . - . ID=gene2602;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YPC_RS13045;old_locus_tag=YPC_2893 NC_017265.1 Protein Homology CDS 2809017 2809955 . - 0 ID=cds2533;Parent=gene2602;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NC_017265.1 RefSeq gene 2809952 2811085 . - . ID=gene2603;Name=YPC_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13050;old_locus_tag=YPC_2894 NC_017265.1 Protein Homology CDS 2809952 2811085 . - 0 ID=cds2534;Parent=gene2603;Dbxref=Genbank:WP_002208799.1;Name=WP_002208799.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002208799.1;transl_table=11 NC_017265.1 RefSeq gene 2811347 2811802 . + . ID=gene2604;Name=YPC_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13055;old_locus_tag=YPC_2896 NC_017265.1 Protein Homology CDS 2811347 2811802 . + 0 ID=cds2535;Parent=gene2604;Dbxref=Genbank:WP_002208801.1;Name=WP_002208801.1;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=WP_002208801.1;transl_table=11 NC_017265.1 RefSeq gene 2811915 2812913 . - . ID=gene2605;Name=YPC_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13060;old_locus_tag=YPC_2897 NC_017265.1 Protein Homology CDS 2811915 2812913 . - 0 ID=cds2536;Parent=gene2605;Dbxref=Genbank:WP_002208802.1;Name=WP_002208802.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002208802.1;transl_table=11 NC_017265.1 RefSeq gene 2812949 2814464 . - . ID=gene2606;Name=YPC_RS13065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13065;pseudo=true NC_017265.1 Protein Homology CDS 2812949 2814464 . - 0 ID=cds2537;Parent=gene2606;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2814633 2815721 . - . ID=gene2607;Name=YPC_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13070;old_locus_tag=YPC_2901 NC_017265.1 Protein Homology CDS 2814633 2815721 . - 0 ID=cds2538;Parent=gene2607;Dbxref=Genbank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11 NC_017265.1 RefSeq gene 2815845 2816555 . - . ID=gene2608;Name=YPC_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13075;old_locus_tag=YPC_2902 NC_017265.1 Protein Homology CDS 2815845 2816555 . - 0 ID=cds2539;Parent=gene2608;Dbxref=Genbank:WP_002208805.1;Name=WP_002208805.1;gbkey=CDS;product=ribose-5-phosphate isomerase A 2;protein_id=WP_002208805.1;transl_table=11 NC_017265.1 RefSeq gene 2816575 2818128 . - . ID=gene2609;Name=YPC_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13080;old_locus_tag=YPC_2903 NC_017265.1 Protein Homology CDS 2816575 2818128 . - 0 ID=cds2540;Parent=gene2609;Dbxref=Genbank:WP_002208806.1;Name=WP_002208806.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002208806.1;transl_table=11 NC_017265.1 RefSeq gene 2818132 2819628 . - . ID=gene2610;Name=YPC_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13085;old_locus_tag=YPC_2904 NC_017265.1 Protein Homology CDS 2818132 2819628 . - 0 ID=cds2541;Parent=gene2610;Dbxref=Genbank:WP_002208807.1;Name=WP_002208807.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002208807.1;transl_table=11 NC_017265.1 RefSeq gene 2819980 2821122 . + . ID=gene2611;Name=YPC_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13090;old_locus_tag=YPC_2905 NC_017265.1 Protein Homology CDS 2819980 2821122 . + 0 ID=cds2542;Parent=gene2611;Dbxref=Genbank:WP_002208808.1;Name=WP_002208808.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_002208808.1;transl_table=11 NC_017265.1 RefSeq gene 2821134 2822084 . + . ID=gene2612;Name=YPC_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13095;old_locus_tag=YPC_2906 NC_017265.1 Protein Homology CDS 2821134 2822084 . + 0 ID=cds2543;Parent=gene2612;Dbxref=Genbank:WP_002264752.1;Name=WP_002264752.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002264752.1;transl_table=11 NC_017265.1 RefSeq gene 2822095 2822910 . + . ID=gene2613;Name=YPC_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13100;old_locus_tag=YPC_2907 NC_017265.1 Protein Homology CDS 2822095 2822910 . + 0 ID=cds2544;Parent=gene2613;Dbxref=Genbank:WP_002208810.1;Name=WP_002208810.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002208810.1;transl_table=11 NC_017265.1 RefSeq gene 2822979 2823233 . - . ID=gene2614;Name=YPC_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13105;old_locus_tag=YPC_2908 NC_017265.1 Protein Homology CDS 2822979 2823233 . - 0 ID=cds2545;Parent=gene2614;Dbxref=Genbank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208811.1;transl_table=11 NC_017265.1 RefSeq gene 2823608 2824852 . + . ID=gene2615;Name=YPC_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13110;old_locus_tag=YPC_2909 NC_017265.1 Protein Homology CDS 2823608 2824852 . + 0 ID=cds2546;Parent=gene2615;Dbxref=Genbank:WP_002208812.1;Name=WP_002208812.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11 NC_017265.1 RefSeq gene 2824956 2825528 . + . ID=gene2616;Name=YPC_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13115;old_locus_tag=YPC_2910 NC_017265.1 Protein Homology CDS 2824956 2825528 . + 0 ID=cds2547;Parent=gene2616;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11 NC_017265.1 RefSeq gene 2825668 2826861 . - . ID=gene2617;Name=YPC_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13120;old_locus_tag=YPC_2911 NC_017265.1 Protein Homology CDS 2825668 2826861 . - 0 ID=cds2548;Parent=gene2617;Dbxref=Genbank:WP_002208813.1;Name=WP_002208813.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_002208813.1;transl_table=11 NC_017265.1 RefSeq gene 2827446 2828918 . + . ID=gene2618;Name=YPC_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13125;old_locus_tag=YPC_2913 NC_017265.1 Protein Homology CDS 2827446 2828918 . + 0 ID=cds2549;Parent=gene2618;Dbxref=Genbank:WP_002208815.1;Name=WP_002208815.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_002208815.1;transl_table=11 NC_017265.1 RefSeq gene 2829062 2829805 . - . ID=gene2619;Name=YPC_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13130;old_locus_tag=YPC_2914 NC_017265.1 Protein Homology CDS 2829062 2829805 . - 0 ID=cds2550;Parent=gene2619;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NC_017265.1 RefSeq gene 2830176 2830289 . + . ID=gene2620;Name=YPC_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13135 NC_017265.1 Protein Homology CDS 2830176 2830289 . + 0 ID=cds2551;Parent=gene2620;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11 NC_017265.1 RefSeq gene 2830613 2831596 . + . ID=gene2621;Name=YPC_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13140;old_locus_tag=YPC_2917 NC_017265.1 Protein Homology CDS 2830613 2831596 . + 0 ID=cds2552;Parent=gene2621;Dbxref=Genbank:WP_002208819.1;Name=WP_002208819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208819.1;transl_table=11 NC_017265.1 RefSeq gene 2831655 2832356 . + . ID=gene2622;Name=YPC_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13145;old_locus_tag=YPC_2918 NC_017265.1 Protein Homology CDS 2831655 2832356 . + 0 ID=cds2553;Parent=gene2622;Dbxref=Genbank:WP_002208820.1;Name=WP_002208820.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208820.1;transl_table=11 NC_017265.1 RefSeq gene 2832798 2833382 . + . ID=gene2623;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=YPC_RS13150;old_locus_tag=YPC_2920 NC_017265.1 Protein Homology CDS 2832798 2833382 . + 0 ID=cds2554;Parent=gene2623;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11 NC_017265.1 RefSeq gene 2834078 2835550 . + . ID=gene2624;Name=YPC_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13155;old_locus_tag=YPC_2924 NC_017265.1 Protein Homology CDS 2834078 2835550 . + 0 ID=cds2555;Parent=gene2624;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11 NC_017265.1 RefSeq gene 2835632 2837440 . + . ID=gene2625;Name=YPC_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13160;old_locus_tag=YPC_2925 NC_017265.1 Protein Homology CDS 2835632 2837440 . + 0 ID=cds2556;Parent=gene2625;Dbxref=Genbank:WP_002208825.1;Name=WP_002208825.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002208825.1;transl_table=11 NC_017265.1 RefSeq gene 2837450 2838550 . + . ID=gene2626;Name=YPC_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13165;old_locus_tag=YPC_2926 NC_017265.1 Protein Homology CDS 2837450 2838550 . + 0 ID=cds2557;Parent=gene2626;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NC_017265.1 RefSeq gene 2838553 2839578 . + . ID=gene2627;Name=YPC_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13170;old_locus_tag=YPC_2927 NC_017265.1 Protein Homology CDS 2838553 2839578 . + 0 ID=cds2558;Parent=gene2627;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NC_017265.1 RefSeq gene 2839580 2841174 . + . ID=gene2628;Name=YPC_RS13175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13175;pseudo=true NC_017265.1 Protein Homology CDS 2839580 2841174 . + 0 ID=cds2559;Parent=gene2628;Note=with YejAEF is involved in resistance to microcin C;exception=annotated by transcript or proteomic data;gbkey=CDS;product=microcin ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2841235 2841579 . - . ID=gene2629;Name=YPC_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13180;old_locus_tag=YPC_2930 NC_017265.1 Protein Homology CDS 2841235 2841579 . - 0 ID=cds2560;Parent=gene2629;Dbxref=Genbank:WP_002208829.1;Name=WP_002208829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208829.1;transl_table=11 NC_017265.1 RefSeq gene 2842546 2843745 . - . ID=gene2630;Name=YPC_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13185;old_locus_tag=YPC_2932 NC_017265.1 Protein Homology CDS 2842546 2843745 . - 0 ID=cds2561;Parent=gene2630;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11 NC_017265.1 RefSeq gene 2843849 2844556 . - . ID=gene2631;Name=YPC_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13190;old_locus_tag=YPC_2933 NC_017265.1 Protein Homology CDS 2843849 2844556 . - 0 ID=cds2562;Parent=gene2631;Dbxref=Genbank:WP_002208832.1;Name=WP_002208832.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=WP_002208832.1;transl_table=11 NC_017265.1 RefSeq gene 2845070 2846827 . + . ID=gene2632;Name=YPC_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13195;old_locus_tag=YPC_2934 NC_017265.1 Protein Homology CDS 2845070 2846827 . + 0 ID=cds2563;Parent=gene2632;Dbxref=Genbank:WP_002208833.1;Name=WP_002208833.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208833.1;transl_table=11 NC_017265.1 RefSeq gene 2846989 2847273 . + . ID=gene2633;Name=YPC_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13200;old_locus_tag=YPC_2935 NC_017265.1 Protein Homology CDS 2846989 2847273 . + 0 ID=cds2564;Parent=gene2633;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2847302 2848025 . + . ID=id222;gbkey=repeat_region NC_017265.1 RefSeq gene 2847412 2847870 . - . ID=gene2634;Name=YPC_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13205;old_locus_tag=YPC_2936 NC_017265.1 Protein Homology CDS 2847412 2847870 . - 0 ID=cds2565;Parent=gene2634;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 2847860 2848015 . - . ID=gene2635;Name=YPC_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13210 NC_017265.1 Protein Homology CDS 2847860 2848015 . - 0 ID=cds2566;Parent=gene2635;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 2848071 2849075 . - . ID=gene2636;Name=YPC_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13215;old_locus_tag=YPC_2938 NC_017265.1 Protein Homology CDS 2848071 2849075 . - 0 ID=cds2567;Parent=gene2636;Dbxref=Genbank:WP_002208835.1;Name=WP_002208835.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_002208835.1;transl_table=11 NC_017265.1 RefSeq gene 2849253 2849480 . + . ID=gene2637;Name=YPC_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13220;old_locus_tag=YPC_2939 NC_017265.1 Protein Homology CDS 2849253 2849480 . + 0 ID=cds2568;Parent=gene2637;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11 NC_017265.1 RefSeq gene 2849508 2851304 . + . ID=gene2638;Name=YPC_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13225;old_locus_tag=YPC_2940 NC_017265.1 Protein Homology CDS 2849508 2851304 . + 0 ID=cds2569;Parent=gene2638;Dbxref=Genbank:WP_002208837.1;Name=WP_002208837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208837.1;transl_table=11 NC_017265.1 RefSeq gene 2851409 2851485 . + . ID=gene2639;Name=YPC_RS13230;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS13230;old_locus_tag=YPC_2941 NC_017265.1 tRNAscan-SE tRNA 2851409 2851485 . + . ID=rna65;Parent=gene2639;anticodon=(pos:2851443..2851445);gbkey=tRNA;product=tRNA-Pro NC_017265.1 tRNAscan-SE exon 2851409 2851485 . + . ID=id223;Parent=rna65;anticodon=(pos:2851443..2851445);gbkey=tRNA;product=tRNA-Pro NC_017265.1 RefSeq repeat_region 2852156 2852708 . + . ID=id224;gbkey=repeat_region NC_017265.1 RefSeq gene 2852275 2853423 . + . ID=gene2640;Name=YPC_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13240;old_locus_tag=YPC_2942 NC_017265.1 Protein Homology CDS 2852275 2853423 . + 0 ID=cds2570;Parent=gene2640;Dbxref=Genbank:WP_002208839.1;Name=WP_002208839.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002208839.1;transl_table=11 NC_017265.1 RefSeq gene 2853436 2853924 . + . ID=gene2641;Name=YPC_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13245;old_locus_tag=YPC_2943 NC_017265.1 Protein Homology CDS 2853436 2853924 . + 0 ID=cds2571;Parent=gene2641;Dbxref=Genbank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208840.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2854183 2854303 . + . ID=id225;gbkey=repeat_region NC_017265.1 RefSeq gene 2854624 2854986 . + . ID=gene2642;Name=YPC_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13255;old_locus_tag=YPC_2946 NC_017265.1 Protein Homology CDS 2854624 2854986 . + 0 ID=cds2572;Parent=gene2642;Dbxref=Genbank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NC_017265.1 RefSeq gene 2855112 2856548 . - . ID=gene2643;Name=YPC_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13260;old_locus_tag=YPC_2947 NC_017265.1 Protein Homology CDS 2855112 2856548 . - 0 ID=cds2573;Parent=gene2643;Dbxref=Genbank:WP_002208842.1;Name=WP_002208842.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NC_017265.1 RefSeq gene 2856839 2857579 . - . ID=gene2644;Name=YPC_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13265;old_locus_tag=YPC_2948 NC_017265.1 Protein Homology CDS 2856839 2857579 . - 0 ID=cds2574;Parent=gene2644;Dbxref=Genbank:WP_002208843.1;Name=WP_002208843.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NC_017265.1 RefSeq gene 2857877 2858656 . - . ID=gene2645;Name=YPC_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13270;old_locus_tag=YPC_2949 NC_017265.1 Protein Homology CDS 2857877 2858656 . - 0 ID=cds2575;Parent=gene2645;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11 NC_017265.1 RefSeq gene 2858753 2859100 . - . ID=gene2646;Name=YPC_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13275;old_locus_tag=YPC_2950 NC_017265.1 Protein Homology CDS 2858753 2859100 . - 0 ID=cds2576;Parent=gene2646;Dbxref=Genbank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208846.1;transl_table=11 NC_017265.1 RefSeq gene 2859097 2859357 . - . ID=gene2647;Name=YPC_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13280;old_locus_tag=YPC_2951 NC_017265.1 Protein Homology CDS 2859097 2859357 . - 0 ID=cds2577;Parent=gene2647;Dbxref=Genbank:WP_002215458.1;Name=WP_002215458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215458.1;transl_table=11 NC_017265.1 RefSeq gene 2859354 2860490 . - . ID=gene2648;Name=YPC_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13285;old_locus_tag=YPC_2952 NC_017265.1 Protein Homology CDS 2859354 2860490 . - 0 ID=cds2578;Parent=gene2648;Dbxref=Genbank:WP_002208847.1;Name=WP_002208847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208847.1;transl_table=11 NC_017265.1 RefSeq gene 2860494 2860949 . - . ID=gene2649;Name=YPC_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13290;old_locus_tag=YPC_2953 NC_017265.1 Protein Homology CDS 2860494 2860949 . - 0 ID=cds2579;Parent=gene2649;Dbxref=Genbank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208848.1;transl_table=11 NC_017265.1 RefSeq gene 2860946 2861542 . - . ID=gene2650;Name=YPC_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13295;old_locus_tag=YPC_2954 NC_017265.1 Protein Homology CDS 2860946 2861542 . - 0 ID=cds2580;Parent=gene2650;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11 NC_017265.1 RefSeq gene 2861558 2862613 . - . ID=gene2651;Name=YPC_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13300;old_locus_tag=YPC_2955 NC_017265.1 Protein Homology CDS 2861558 2862613 . - 0 ID=cds2581;Parent=gene2651;Dbxref=Genbank:WP_002208850.1;Name=WP_002208850.1;gbkey=CDS;product=tail protein;protein_id=WP_002208850.1;transl_table=11 NC_017265.1 RefSeq gene 2862610 2864016 . - . ID=gene2652;Name=YPC_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13305;old_locus_tag=YPC_2956 NC_017265.1 Protein Homology CDS 2862610 2864016 . - 0 ID=cds2582;Parent=gene2652;Dbxref=Genbank:WP_002208852.1;Name=WP_002208852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208852.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2864074 2864243 . + . ID=id226;gbkey=repeat_region NC_017265.1 RefSeq gene 2864283 2865776 . - . ID=gene2653;Name=YPC_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13310;old_locus_tag=YPC_2958 NC_017265.1 Protein Homology CDS 2864283 2865776 . - 0 ID=cds2583;Parent=gene2653;Dbxref=Genbank:WP_002208853.1;Name=WP_002208853.1;gbkey=CDS;product=coat protein;protein_id=WP_002208853.1;transl_table=11 NC_017265.1 RefSeq gene 2865897 2866196 . - . ID=gene2654;Name=YPC_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13315;old_locus_tag=YPC_2959 NC_017265.1 Protein Homology CDS 2865897 2866196 . - 0 ID=cds2584;Parent=gene2654;Dbxref=Genbank:WP_002208854.1;Name=WP_002208854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208854.1;transl_table=11 NC_017265.1 RefSeq gene 2866198 2866566 . - . ID=gene2655;Name=YPC_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13320;old_locus_tag=YPC_2960 NC_017265.1 Protein Homology CDS 2866198 2866566 . - 0 ID=cds2585;Parent=gene2655;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11 NC_017265.1 RefSeq gene 2866588 2868095 . - . ID=gene2656;Name=YPC_RS13325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13325;old_locus_tag=YPC_2962;pseudo=true NC_017265.1 Protein Homology CDS 2866588 2868095 . - 0 ID=cds2586;Parent=gene2656;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2868092 2868286 . - . ID=gene2657;Name=YPC_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13330;old_locus_tag=YPC_2963 NC_017265.1 Protein Homology CDS 2868092 2868286 . - 0 ID=cds2587;Parent=gene2657;Dbxref=Genbank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208857.1;transl_table=11 NC_017265.1 RefSeq gene 2868291 2868860 . - . ID=gene2658;Name=YPC_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13335;old_locus_tag=YPC_2964 NC_017265.1 Protein Homology CDS 2868291 2868860 . - 0 ID=cds2588;Parent=gene2658;Dbxref=Genbank:WP_002363609.1;Name=WP_002363609.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002363609.1;transl_table=11 NC_017265.1 RefSeq gene 2868954 2869244 . - . ID=gene2659;Name=YPC_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13340;old_locus_tag=YPC_2965 NC_017265.1 Protein Homology CDS 2868954 2869244 . - 0 ID=cds2589;Parent=gene2659;Dbxref=Genbank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NC_017265.1 RefSeq gene 2869875 2870669 . - . ID=gene2660;Name=YPC_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13345;old_locus_tag=YPC_2966 NC_017265.1 Protein Homology CDS 2869875 2870669 . - 0 ID=cds2590;Parent=gene2660;Dbxref=Genbank:WP_002208860.1;Name=WP_002208860.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002208860.1;transl_table=11 NC_017265.1 RefSeq gene 2870645 2871454 . - . ID=gene2661;Name=YPC_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13350;old_locus_tag=YPC_2967 NC_017265.1 Protein Homology CDS 2870645 2871454 . - 0 ID=cds2591;Parent=gene2661;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11 NC_017265.1 RefSeq gene 2871460 2872109 . - . ID=gene2662;Name=YPC_RS13355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13355;old_locus_tag=YPC_2968;pseudo=true NC_017265.1 Protein Homology CDS 2871460 2872109 . - 0 ID=cds2592;Parent=gene2662;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aldolase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2872166 2873470 . - . ID=gene2663;Name=YPC_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13360;old_locus_tag=YPC_2969 NC_017265.1 Protein Homology CDS 2872166 2873470 . - 0 ID=cds2593;Parent=gene2663;Dbxref=Genbank:WP_042468586.1;Name=WP_042468586.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_042468586.1;transl_table=11 NC_017265.1 RefSeq gene 2873681 2874160 . - . ID=gene2664;Name=YPC_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13365;old_locus_tag=YPC_2970 NC_017265.1 Protein Homology CDS 2873681 2874160 . - 0 ID=cds2594;Parent=gene2664;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11 NC_017265.1 RefSeq gene 2874434 2875156 . + . ID=gene2665;Name=YPC_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13370;old_locus_tag=YPC_2971 NC_017265.1 Protein Homology CDS 2874434 2875156 . + 0 ID=cds2595;Parent=gene2665;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11 NC_017265.1 RefSeq gene 2875362 2875604 . + . ID=gene2666;Name=YPC_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13375;old_locus_tag=YPC_2973 NC_017265.1 Protein Homology CDS 2875362 2875604 . + 0 ID=cds2596;Parent=gene2666;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11 NC_017265.1 RefSeq gene 2875776 2876711 . + . ID=gene2667;Name=YPC_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13380;old_locus_tag=YPC_2974 NC_017265.1 Protein Homology CDS 2875776 2876711 . + 0 ID=cds2597;Parent=gene2667;Dbxref=Genbank:WP_002208867.1;Name=WP_002208867.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_002208867.1;transl_table=11 NC_017265.1 RefSeq gene 2877133 2878920 . + . ID=gene2668;Name=YPC_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13385;old_locus_tag=YPC_2975 NC_017265.1 Protein Homology CDS 2877133 2878920 . + 0 ID=cds2598;Parent=gene2668;Dbxref=Genbank:WP_002208868.1;Name=WP_002208868.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NC_017265.1 RefSeq gene 2878994 2879983 . - . ID=gene2669;Name=YPC_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13390;old_locus_tag=YPC_2976 NC_017265.1 Protein Homology CDS 2878994 2879983 . - 0 ID=cds2599;Parent=gene2669;Dbxref=Genbank:WP_002363585.1;Name=WP_002363585.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002363585.1;transl_table=11 NC_017265.1 RefSeq gene 2880399 2881925 . + . ID=gene2670;Name=YPC_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13395;old_locus_tag=YPC_2977 NC_017265.1 Protein Homology CDS 2880399 2881925 . + 0 ID=cds2600;Parent=gene2670;Dbxref=Genbank:WP_015683690.1;Name=WP_015683690.1;gbkey=CDS;product=MFS transporter;protein_id=WP_015683690.1;transl_table=11 NC_017265.1 RefSeq gene 2881912 2882082 . - . ID=gene2671;Name=YPC_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13400 NC_017265.1 Protein Homology CDS 2881912 2882082 . - 0 ID=cds2601;Parent=gene2671;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11 NC_017265.1 RefSeq gene 2882200 2883366 . + . ID=gene2672;Name=YPC_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13405;old_locus_tag=YPC_2979 NC_017265.1 Protein Homology CDS 2882200 2883366 . + 0 ID=cds2602;Parent=gene2672;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11 NC_017265.1 RefSeq gene 2883554 2883629 . - . ID=gene2673;Name=YPC_RS13410;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS13410;old_locus_tag=YPC_2980 NC_017265.1 tRNAscan-SE tRNA 2883554 2883629 . - . ID=rna66;Parent=gene2673;anticodon=(pos:complement(2883594..2883596));gbkey=tRNA;product=tRNA-Thr NC_017265.1 tRNAscan-SE exon 2883554 2883629 . - . ID=id227;Parent=rna66;anticodon=(pos:complement(2883594..2883596));gbkey=tRNA;product=tRNA-Thr NC_017265.1 RefSeq gene 2883635 2883722 . - . ID=gene2674;Name=YPC_RS13415;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS13415;old_locus_tag=YPC_2981 NC_017265.1 tRNAscan-SE tRNA 2883635 2883722 . - . ID=rna67;Parent=gene2674;anticodon=(pos:complement(2883686..2883688));gbkey=tRNA;product=tRNA-Ser NC_017265.1 tRNAscan-SE exon 2883635 2883722 . - . ID=id228;Parent=rna67;anticodon=(pos:complement(2883686..2883688));gbkey=tRNA;product=tRNA-Ser NC_017265.1 RefSeq repeat_region 2884045 2884769 . + . ID=id229;gbkey=repeat_region NC_017265.1 RefSeq gene 2884156 2884614 . - . ID=gene2675;Name=YPC_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13420;old_locus_tag=YPC_2982 NC_017265.1 Protein Homology CDS 2884156 2884614 . - 0 ID=cds2603;Parent=gene2675;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 2884816 2885931 . - . ID=gene2676;Name=YPC_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13425;old_locus_tag=YPC_2985 NC_017265.1 Protein Homology CDS 2884816 2885931 . - 0 ID=cds2604;Parent=gene2676;Dbxref=Genbank:WP_002210826.1;Name=WP_002210826.1;gbkey=CDS;product=porin;protein_id=WP_002210826.1;transl_table=11 NC_017265.1 RefSeq gene 2886251 2886335 . + . ID=gene2677;Name=micF;gbkey=Gene;gene=micF;gene_biotype=antisense_RNA;locus_tag=YPC_RS22025 NC_017265.1 RefSeq ncRNA 2886251 2886335 . + . ID=rna68;Parent=gene2677;Dbxref=ASAP:BBE-0004878,ASAP:BBE-0004878 ERIC;gbkey=ncRNA;gene=micF;ncrna_class=antisense_RNA;product=MicF regulatory antisense RNA NC_017265.1 RefSeq exon 2886251 2886335 . + . ID=id230;Parent=rna68;Dbxref=ASAP:BBE-0004878,ASAP:BBE-0004878 ERIC;gbkey=ncRNA;gene=micF;ncrna_class=antisense_RNA;product=MicF regulatory antisense RNA NC_017265.1 RefSeq gene 2887034 2888188 . + . ID=gene2678;Name=YPC_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13435;old_locus_tag=YPC_2987 NC_017265.1 Protein Homology CDS 2887034 2888188 . + 0 ID=cds2605;Parent=gene2678;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NC_017265.1 RefSeq gene 2888287 2890164 . + . ID=gene2679;Name=YPC_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13440;old_locus_tag=YPC_2988 NC_017265.1 Protein Homology CDS 2888287 2890164 . + 0 ID=cds2606;Parent=gene2679;Dbxref=Genbank:WP_002231290.1;Name=WP_002231290.1;gbkey=CDS;product=ATPase;protein_id=WP_002231290.1;transl_table=11 NC_017265.1 RefSeq gene 2890332 2890904 . + . ID=gene2680;Name=YPC_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13445;old_locus_tag=YPC_2989 NC_017265.1 Protein Homology CDS 2890332 2890904 . + 0 ID=cds2607;Parent=gene2680;Dbxref=Genbank:WP_002216094.1;Name=WP_002216094.1;gbkey=CDS;product=histidine phosphotransferase;protein_id=WP_002216094.1;transl_table=11 NC_017265.1 RefSeq gene 2890907 2891560 . + . ID=gene2681;Name=YPC_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13450;old_locus_tag=YPC_2990 NC_017265.1 Protein Homology CDS 2890907 2891560 . + 0 ID=cds2608;Parent=gene2681;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11 NC_017265.1 RefSeq gene 2891628 2894408 . - . ID=gene2682;Name=YPC_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13455;old_locus_tag=YPC_2991 NC_017265.1 Protein Homology CDS 2891628 2894408 . - 0 ID=cds2609;Parent=gene2682;Dbxref=Genbank:WP_016582247.1;Name=WP_016582247.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_016582247.1;transl_table=11 NC_017265.1 RefSeq gene 2894561 2894686 . - . ID=gene2683;Name=YPC_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13460;old_locus_tag=YPC_2992 NC_017265.1 Protein Homology CDS 2894561 2894686 . - 0 ID=cds2610;Parent=gene2683;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11 NC_017265.1 RefSeq gene 2894689 2897364 . - . ID=gene2684;Name=YPC_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13465;old_locus_tag=YPC_2993 NC_017265.1 Protein Homology CDS 2894689 2897364 . - 0 ID=cds2611;Parent=gene2684;Dbxref=Genbank:WP_002210821.1;Name=WP_002210821.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_002210821.1;transl_table=11 NC_017265.1 RefSeq gene 2897626 2898354 . + . ID=gene2685;Name=YPC_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13470;old_locus_tag=YPC_2994 NC_017265.1 Protein Homology CDS 2897626 2898354 . + 0 ID=cds2612;Parent=gene2685;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11 NC_017265.1 RefSeq gene 2898848 2901136 . + . ID=gene2686;Name=YPC_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13475;old_locus_tag=YPC_2995 NC_017265.1 Protein Homology CDS 2898848 2901136 . + 0 ID=cds2613;Parent=gene2686;Dbxref=Genbank:WP_002210818.1;Name=WP_002210818.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NC_017265.1 RefSeq gene 2901299 2902429 . + . ID=gene2687;Name=YPC_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13480;old_locus_tag=YPC_2996 NC_017265.1 Protein Homology CDS 2901299 2902429 . + 0 ID=cds2614;Parent=gene2687;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NC_017265.1 RefSeq gene 2902433 2902690 . + . ID=gene2688;Name=YPC_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13485;old_locus_tag=YPC_2997 NC_017265.1 Protein Homology CDS 2902433 2902690 . + 0 ID=cds2615;Parent=gene2688;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11 NC_017265.1 RefSeq gene 2902725 2903234 . + . ID=gene2689;Name=YPC_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13490;old_locus_tag=YPC_2999 NC_017265.1 Protein Homology CDS 2902725 2903234 . + 0 ID=cds2616;Parent=gene2689;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11 NC_017265.1 RefSeq gene 2903292 2904485 . - . ID=gene2690;Name=YPC_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13495;old_locus_tag=YPC_3000 NC_017265.1 Protein Homology CDS 2903292 2904485 . - 0 ID=cds2617;Parent=gene2690;Dbxref=Genbank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210814.1;transl_table=11 NC_017265.1 RefSeq gene 2905104 2906312 . + . ID=gene2691;Name=YPC_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13500;old_locus_tag=YPC_3002 NC_017265.1 Protein Homology CDS 2905104 2906312 . + 0 ID=cds2618;Parent=gene2691;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NC_017265.1 RefSeq gene 2906569 2907111 . - . ID=gene2692;Name=YPC_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13505;old_locus_tag=YPC_3003 NC_017265.1 Protein Homology CDS 2906569 2907111 . - 0 ID=cds2619;Parent=gene2692;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11 NC_017265.1 RefSeq gene 2907469 2908911 . + . ID=gene2693;Name=YPC_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13510;old_locus_tag=YPC_3004 NC_017265.1 Protein Homology CDS 2907469 2908911 . + 0 ID=cds2620;Parent=gene2693;Dbxref=Genbank:WP_002228030.1;Name=WP_002228030.1;gbkey=CDS;product=catalase;protein_id=WP_002228030.1;transl_table=11 NC_017265.1 RefSeq gene 2908979 2911156 . - . ID=gene2694;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YPC_RS13515;old_locus_tag=YPC_3005 NC_017265.1 Protein Homology CDS 2908979 2911156 . - 0 ID=cds2621;Parent=gene2694;Dbxref=Genbank:WP_015683693.1;Name=WP_015683693.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_015683693.1;transl_table=11 NC_017265.1 RefSeq gene 2911426 2912541 . + . ID=gene2695;Name=YPC_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13520;old_locus_tag=YPC_3006 NC_017265.1 Protein Homology CDS 2911426 2912541 . + 0 ID=cds2622;Parent=gene2695;Dbxref=Genbank:WP_002210809.1;Name=WP_002210809.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_002210809.1;transl_table=11 NC_017265.1 RefSeq gene 2912953 2913843 . + . ID=gene2696;Name=YPC_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13525;old_locus_tag=YPC_3007 NC_017265.1 Protein Homology CDS 2912953 2913843 . + 0 ID=cds2623;Parent=gene2696;Dbxref=Genbank:WP_002210807.1;Name=WP_002210807.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002210807.1;transl_table=11 NC_017265.1 RefSeq gene 2913968 2914171 . + . ID=gene2697;Name=YPC_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13530;old_locus_tag=YPC_3008 NC_017265.1 Protein Homology CDS 2913968 2914171 . + 0 ID=cds2624;Parent=gene2697;Dbxref=Genbank:WP_002210806.1;Name=WP_002210806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210806.1;transl_table=11 NC_017265.1 RefSeq gene 2914289 2916595 . - . ID=gene2698;Name=YPC_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13535;old_locus_tag=YPC_3009 NC_017265.1 Protein Homology CDS 2914289 2916595 . - 0 ID=cds2625;Parent=gene2698;Dbxref=Genbank:WP_002210805.1;Name=WP_002210805.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_002210805.1;transl_table=11 NC_017265.1 RefSeq gene 2916665 2917998 . - . ID=gene2699;Name=YPC_RS13540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13540;pseudo=true NC_017265.1 Protein Homology CDS 2916665 2917998 . - 0 ID=cds2626;Parent=gene2699;exception=annotated by transcript or proteomic data;gbkey=CDS;product=arginine:agmatine antiporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2918464 2919300 . - . ID=gene2700;Name=YPC_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13545;old_locus_tag=YPC_3012 NC_017265.1 Protein Homology CDS 2918464 2919300 . - 0 ID=cds2627;Parent=gene2700;Dbxref=Genbank:WP_002210803.1;Name=WP_002210803.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210803.1;transl_table=11 NC_017265.1 RefSeq gene 2919297 2920235 . - . ID=gene2701;Name=YPC_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13550;old_locus_tag=YPC_3013 NC_017265.1 Protein Homology CDS 2919297 2920235 . - 0 ID=cds2628;Parent=gene2701;Dbxref=Genbank:WP_002210802.1;Name=WP_002210802.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210802.1;transl_table=11 NC_017265.1 RefSeq gene 2920232 2921386 . - . ID=gene2702;Name=YPC_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13555;old_locus_tag=YPC_3014 NC_017265.1 Protein Homology CDS 2920232 2921386 . - 0 ID=cds2629;Parent=gene2702;Dbxref=Genbank:WP_002210801.1;Name=WP_002210801.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210801.1;transl_table=11 NC_017265.1 RefSeq gene 2921647 2921967 . - . ID=gene2703;Name=YPC_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13560;old_locus_tag=YPC_3015 NC_017265.1 Protein Homology CDS 2921647 2921967 . - 0 ID=cds2630;Parent=gene2703;Dbxref=Genbank:WP_002214181.1;Name=WP_002214181.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214181.1;transl_table=11 NC_017265.1 RefSeq gene 2922112 2922579 . - . ID=gene2704;Name=YPC_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13565;old_locus_tag=YPC_3016 NC_017265.1 Protein Homology CDS 2922112 2922579 . - 0 ID=cds2631;Parent=gene2704;Dbxref=Genbank:WP_002214183.1;Name=WP_002214183.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214183.1;transl_table=11 NC_017265.1 RefSeq gene 2923315 2924169 . + . ID=gene2705;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YPC_RS13570;old_locus_tag=YPC_3017 NC_017265.1 Protein Homology CDS 2923315 2924169 . + 0 ID=cds2632;Parent=gene2705;Dbxref=Genbank:WP_002210799.1;Name=WP_002210799.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002210799.1;transl_table=11 NC_017265.1 RefSeq gene 2924450 2925865 . - . ID=gene2706;Name=YPC_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13575;old_locus_tag=YPC_3018 NC_017265.1 Protein Homology CDS 2924450 2925865 . - 0 ID=cds2633;Parent=gene2706;Dbxref=Genbank:WP_002210798.1;Name=WP_002210798.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_002210798.1;transl_table=11 NC_017265.1 RefSeq gene 2925889 2926746 . - . ID=gene2707;Name=YPC_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13580;old_locus_tag=YPC_3019 NC_017265.1 Protein Homology CDS 2925889 2926746 . - 0 ID=cds2634;Parent=gene2707;Dbxref=Genbank:WP_002210797.1;Name=WP_002210797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210797.1;transl_table=11 NC_017265.1 RefSeq gene 2926861 2927559 . - . ID=gene2708;Name=YPC_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13585;old_locus_tag=YPC_3020 NC_017265.1 Protein Homology CDS 2926861 2927559 . - 0 ID=cds2635;Parent=gene2708;Dbxref=Genbank:WP_002223523.1;Name=WP_002223523.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002223523.1;transl_table=11 NC_017265.1 RefSeq gene 2927653 2928489 . - . ID=gene2709;Name=YPC_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13590;old_locus_tag=YPC_3021 NC_017265.1 Protein Homology CDS 2927653 2928489 . - 0 ID=cds2636;Parent=gene2709;Dbxref=Genbank:WP_002210795.1;Name=WP_002210795.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210795.1;transl_table=11 NC_017265.1 RefSeq gene 2928486 2929563 . - . ID=gene2710;Name=YPC_RS13595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13595;pseudo=true NC_017265.1 Protein Homology CDS 2928486 2929563 . - 0 ID=cds2637;Parent=gene2710;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2929563 2931164 . - . ID=gene2711;Name=YPC_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13600;old_locus_tag=YPC_3023 NC_017265.1 Protein Homology CDS 2929563 2931164 . - 0 ID=cds2638;Parent=gene2711;Dbxref=Genbank:WP_002210793.1;Name=WP_002210793.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_002210793.1;transl_table=11 NC_017265.1 RefSeq gene 2931288 2932556 . - . ID=gene2712;Name=YPC_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13605;old_locus_tag=YPC_3024 NC_017265.1 Protein Homology CDS 2931288 2932556 . - 0 ID=cds2639;Parent=gene2712;Dbxref=Genbank:WP_002210792.1;Name=WP_002210792.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11 NC_017265.1 RefSeq gene 2932998 2933471 . - . ID=gene2713;Name=YPC_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13610;old_locus_tag=YPC_3025 NC_017265.1 Protein Homology CDS 2932998 2933471 . - 0 ID=cds2640;Parent=gene2713;Dbxref=Genbank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210791.1;transl_table=11 NC_017265.1 RefSeq gene 2933717 2934598 . - . ID=gene2714;Name=YPC_RS13615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13615;pseudo=true NC_017265.1 Protein Homology CDS 2933717 2934598 . - 0 ID=cds2641;Parent=gene2714;gbkey=CDS;product=phosphonate ABC transporter permease;pseudo=true;transl_except=(pos:complement(2934437..2934439)%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 2934601 2935461 . - . ID=gene2715;Name=YPC_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13620;old_locus_tag=YPC_3028 NC_017265.1 Protein Homology CDS 2934601 2935461 . - 0 ID=cds2642;Parent=gene2715;Dbxref=Genbank:WP_002210789.1;Name=WP_002210789.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210789.1;transl_table=11 NC_017265.1 RefSeq gene 2935564 2936493 . - . ID=gene2716;Name=YPC_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13625;old_locus_tag=YPC_3029 NC_017265.1 Protein Homology CDS 2935564 2936493 . - 0 ID=cds2643;Parent=gene2716;Dbxref=Genbank:WP_002210788.1;Name=WP_002210788.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_002210788.1;transl_table=11 NC_017265.1 RefSeq gene 2936530 2937366 . - . ID=gene2717;Name=YPC_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13630;old_locus_tag=YPC_3030 NC_017265.1 Protein Homology CDS 2936530 2937366 . - 0 ID=cds2644;Parent=gene2717;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11 NC_017265.1 RefSeq gene 2937574 2937822 . - . ID=gene2718;Name=YPC_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13635;old_locus_tag=YPC_3031 NC_017265.1 Protein Homology CDS 2937574 2937822 . - 0 ID=cds2645;Parent=gene2718;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11 NC_017265.1 RefSeq gene 2938007 2939110 . - . ID=gene2719;Name=YPC_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13640;old_locus_tag=YPC_3032 NC_017265.1 Protein Homology CDS 2938007 2939110 . - 0 ID=cds2646;Parent=gene2719;Dbxref=Genbank:WP_002210785.1;Name=WP_002210785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210785.1;transl_table=11 NC_017265.1 RefSeq gene 2939423 2939764 . + . ID=gene2720;Name=YPC_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13645;old_locus_tag=YPC_3034 NC_017265.1 Protein Homology CDS 2939423 2939764 . + 0 ID=cds2647;Parent=gene2720;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11 NC_017265.1 RefSeq gene 2939790 2940329 . - . ID=gene2721;Name=YPC_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13650;old_locus_tag=YPC_3035 NC_017265.1 Protein Homology CDS 2939790 2940329 . - 0 ID=cds2648;Parent=gene2721;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NC_017265.1 RefSeq gene 2940539 2942251 . + . ID=gene2722;Name=YPC_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13655;old_locus_tag=YPC_3037 NC_017265.1 Protein Homology CDS 2940539 2942251 . + 0 ID=cds2649;Parent=gene2722;Dbxref=Genbank:WP_002210781.1;Name=WP_002210781.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210781.1;transl_table=11 NC_017265.1 RefSeq gene 2942372 2943307 . - . ID=gene2723;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YPC_RS13660;old_locus_tag=YPC_3038 NC_017265.1 Protein Homology CDS 2942372 2943307 . - 0 ID=cds2650;Parent=gene2723;Dbxref=Genbank:WP_002210780.1;Name=WP_002210780.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_002210780.1;transl_table=11 NC_017265.1 RefSeq gene 2943646 2943825 . + . ID=gene2724;Name=YPC_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13665;old_locus_tag=YPC_3040 NC_017265.1 Protein Homology CDS 2943646 2943825 . + 0 ID=cds2651;Parent=gene2724;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11 NC_017265.1 RefSeq gene 2943899 2944837 . - . ID=gene2725;Name=YPC_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13670;old_locus_tag=YPC_3041 NC_017265.1 Protein Homology CDS 2943899 2944837 . - 0 ID=cds2652;Parent=gene2725;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11 NC_017265.1 RefSeq gene 2945137 2946066 . - . ID=gene2726;Name=YPC_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13675;old_locus_tag=YPC_3042 NC_017265.1 Protein Homology CDS 2945137 2946066 . - 0 ID=cds2653;Parent=gene2726;Dbxref=Genbank:WP_002210776.1;Name=WP_002210776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210776.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2946369 2948143 . + . ID=id231;gbkey=repeat_region NC_017265.1 RefSeq gene 2946481 2946939 . - . ID=gene2727;Name=YPC_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13680;old_locus_tag=YPC_3043 NC_017265.1 Protein Homology CDS 2946481 2946939 . - 0 ID=cds2654;Parent=gene2727;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 2946929 2947084 . - . ID=gene2728;Name=YPC_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13685 NC_017265.1 Protein Homology CDS 2946929 2947084 . - 0 ID=cds2655;Parent=gene2728;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 2947150 2948151 . - . ID=gene2729;Name=YPC_RS13690;end_range=2948151,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13690;old_locus_tag=YPC_3045;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 2947150 2948151 . - 0 ID=cds2656;Parent=gene2729;Note=this helicase is not essential cell growth;end_range=2948151,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-dependent RNA helicase RhlE;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2948069 2948659 . - . ID=gene2730;Name=YPC_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13695;old_locus_tag=YPC_3046 NC_017265.1 Protein Homology CDS 2948069 2948659 . - 0 ID=cds2657;Parent=gene2730;Dbxref=Genbank:WP_002228614.1;Name=WP_002228614.1;gbkey=CDS;product=transposase;protein_id=WP_002228614.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2948712 2950033 . + . ID=id232;gbkey=repeat_region NC_017265.1 RefSeq gene 2948751 2949959 . - . ID=gene2731;Name=YPC_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13700;old_locus_tag=YPC_3047 NC_017265.1 Protein Homology CDS 2948751 2949959 . - 0 ID=cds2658;Parent=gene2731;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 2950050 2950685 . + . ID=gene2732;Name=YPC_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13705;old_locus_tag=YPC_3048 NC_017265.1 Protein Homology CDS 2950050 2950685 . + 0 ID=cds2659;Parent=gene2732;Dbxref=Genbank:WP_002209805.1;Name=WP_002209805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209805.1;transl_table=11 NC_017265.1 RefSeq gene 2950682 2951077 . + . ID=gene2733;Name=YPC_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13710;old_locus_tag=YPC_3049 NC_017265.1 Protein Homology CDS 2950682 2951077 . + 0 ID=cds2660;Parent=gene2733;Dbxref=Genbank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216980.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2950976 2951121 . + . ID=id233;gbkey=repeat_region NC_017265.1 RefSeq gene 2951141 2951536 . + . ID=gene2734;Name=YPC_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13715;old_locus_tag=YPC_3050 NC_017265.1 Protein Homology CDS 2951141 2951536 . + 0 ID=cds2661;Parent=gene2734;Dbxref=Genbank:WP_002216979.1;Name=WP_002216979.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216979.1;transl_table=11 NC_017265.1 RefSeq gene 2951598 2951993 . + . ID=gene2735;Name=YPC_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13720;old_locus_tag=YPC_3051 NC_017265.1 Protein Homology CDS 2951598 2951993 . + 0 ID=cds2662;Parent=gene2735;Dbxref=Genbank:WP_002415472.1;Name=WP_002415472.1;gbkey=CDS;product=membrane protein;protein_id=WP_002415472.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2951892 2952037 . + . ID=id234;gbkey=repeat_region NC_017265.1 RefSeq gene 2952057 2952462 . + . ID=gene2736;Name=YPC_RS13725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13725;old_locus_tag=YPC_3052;pseudo=true NC_017265.1 Protein Homology CDS 2952057 2952462 . + 0 ID=cds2663;Parent=gene2736;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2952486 2952965 . + . ID=gene2737;Name=YPC_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13730;old_locus_tag=YPC_3053 NC_017265.1 Protein Homology CDS 2952486 2952965 . + 0 ID=cds2664;Parent=gene2737;Dbxref=Genbank:WP_002209806.1;Name=WP_002209806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209806.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2953014 2953736 . + . ID=id235;gbkey=repeat_region NC_017265.1 RefSeq gene 2953125 2953583 . - . ID=gene2738;Name=YPC_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13735;old_locus_tag=YPC_3054 NC_017265.1 Protein Homology CDS 2953125 2953583 . - 0 ID=cds2665;Parent=gene2738;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 2953573 2953746 . - . ID=gene2739;Name=YPC_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13740 NC_017265.1 Protein Homology CDS 2953573 2953746 . - 0 ID=cds2666;Parent=gene2739;Dbxref=Genbank:WP_025470750.1;Name=WP_025470750.1;gbkey=CDS;product=transposase;protein_id=WP_025470750.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2953757 2953889 . + . ID=id236;gbkey=repeat_region NC_017265.1 RefSeq gene 2953958 2955535 . - . ID=gene2740;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YPC_RS13745;old_locus_tag=YPC_3056 NC_017265.1 Protein Homology CDS 2953958 2955535 . - 0 ID=cds2667;Parent=gene2740;Dbxref=Genbank:WP_002209807.1;Name=WP_002209807.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_002209807.1;transl_table=11 NC_017265.1 RefSeq gene 2955518 2955643 . + . ID=gene2741;Name=YPC_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13750;old_locus_tag=YPC_3057 NC_017265.1 Protein Homology CDS 2955518 2955643 . + 0 ID=cds2668;Parent=gene2741;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11 NC_017265.1 RefSeq gene 2955715 2957178 . - . ID=gene2742;Name=YPC_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13755;old_locus_tag=YPC_3058 NC_017265.1 Protein Homology CDS 2955715 2957178 . - 0 ID=cds2669;Parent=gene2742;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NC_017265.1 RefSeq gene 2957348 2958727 . + . ID=gene2743;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YPC_RS13760;old_locus_tag=YPC_3059 NC_017265.1 Protein Homology CDS 2957348 2958727 . + 0 ID=cds2670;Parent=gene2743;Dbxref=Genbank:WP_002209810.1;Name=WP_002209810.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_002209810.1;transl_table=11 NC_017265.1 RefSeq gene 2958860 2959084 . - . ID=gene2744;Name=YPC_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13765;old_locus_tag=YPC_3060 NC_017265.1 Protein Homology CDS 2958860 2959084 . - 0 ID=cds2671;Parent=gene2744;Dbxref=Genbank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209811.1;transl_table=11 NC_017265.1 RefSeq gene 2959133 2960089 . - . ID=gene2745;Name=YPC_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13770;old_locus_tag=YPC_3061 NC_017265.1 Protein Homology CDS 2959133 2960089 . - 0 ID=cds2672;Parent=gene2745;Dbxref=Genbank:WP_002209812.1;Name=WP_002209812.1;gbkey=CDS;product=transporter;protein_id=WP_002209812.1;transl_table=11 NC_017265.1 RefSeq gene 2960436 2961923 . - . ID=gene2746;Name=YPC_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13775;old_locus_tag=YPC_3064 NC_017265.1 Protein Homology CDS 2960436 2961923 . - 0 ID=cds2673;Parent=gene2746;Dbxref=Genbank:WP_002209813.1;Name=WP_002209813.1;gbkey=CDS;product=GTPase Der;protein_id=WP_002209813.1;transl_table=11 NC_017265.1 RefSeq gene 2962071 2963252 . - . ID=gene2747;Name=YPC_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13780;old_locus_tag=YPC_3065 NC_017265.1 Protein Homology CDS 2962071 2963252 . - 0 ID=cds2674;Parent=gene2747;Dbxref=Genbank:WP_002209814.1;Name=WP_002209814.1;gbkey=CDS;product=outer membrane protein assembly factor BamB;protein_id=WP_002209814.1;transl_table=11 NC_017265.1 RefSeq gene 2963264 2963899 . - . ID=gene2748;Name=YPC_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13785;old_locus_tag=YPC_3066 NC_017265.1 Protein Homology CDS 2963264 2963899 . - 0 ID=cds2675;Parent=gene2748;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11 NC_017265.1 RefSeq gene 2963913 2965187 . - . ID=gene2749;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YPC_RS13790;old_locus_tag=YPC_3067 NC_017265.1 Protein Homology CDS 2963913 2965187 . - 0 ID=cds2676;Parent=gene2749;Dbxref=Genbank:WP_002209816.1;Name=WP_002209816.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_002209816.1;transl_table=11 NC_017265.1 RefSeq gene 2965396 2966523 . - . ID=gene2750;Name=YPC_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13795;old_locus_tag=YPC_3069 NC_017265.1 Protein Homology CDS 2965396 2966523 . - 0 ID=cds2677;Parent=gene2750;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11 NC_017265.1 RefSeq gene 2966585 2967622 . - . ID=gene2751;Name=YPC_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13800;old_locus_tag=YPC_3070 NC_017265.1 Protein Homology CDS 2966585 2967622 . - 0 ID=cds2678;Parent=gene2751;Dbxref=Genbank:WP_002209818.1;Name=WP_002209818.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_002209818.1;transl_table=11 NC_017265.1 RefSeq gene 2967612 2968361 . - . ID=gene2752;Name=YPC_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13805;old_locus_tag=YPC_3071 NC_017265.1 Protein Homology CDS 2967612 2968361 . - 0 ID=cds2679;Parent=gene2752;Dbxref=Genbank:WP_002209819.1;Name=WP_002209819.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_002209819.1;transl_table=11 NC_017265.1 RefSeq gene 2968515 2969711 . - . ID=gene2753;Name=YPC_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13810;old_locus_tag=YPC_3072 NC_017265.1 Protein Homology CDS 2968515 2969711 . - 0 ID=cds2680;Parent=gene2753;Dbxref=Genbank:WP_002209820.1;Name=WP_002209820.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002209820.1;transl_table=11 NC_017265.1 RefSeq gene 2969973 2970401 . - . ID=gene2754;Name=YPC_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13815;old_locus_tag=YPC_3073 NC_017265.1 Protein Homology CDS 2969973 2970401 . - 0 ID=cds2681;Parent=gene2754;Dbxref=Genbank:WP_002209821.1;Name=WP_002209821.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_002209821.1;transl_table=11 NC_017265.1 RefSeq gene 2970728 2973148 . - . ID=gene2755;Name=YPC_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13820;old_locus_tag=YPC_3074 NC_017265.1 Protein Homology CDS 2970728 2973148 . - 0 ID=cds2682;Parent=gene2755;Dbxref=Genbank:WP_015683700.1;Name=WP_015683700.1;gbkey=CDS;product=beta-gamma-crystallin;protein_id=WP_015683700.1;transl_table=11 NC_017265.1 RefSeq gene 2973323 2973580 . + . ID=gene2756;Name=YPC_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13825;old_locus_tag=YPC_3075 NC_017265.1 Protein Homology CDS 2973323 2973580 . + 0 ID=cds2683;Parent=gene2756;Dbxref=Genbank:WP_002215513.1;Name=WP_002215513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215513.1;transl_table=11 NC_017265.1 RefSeq gene 2974095 2978239 . + . ID=gene2757;Name=YPC_RS13830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS13830;old_locus_tag=YPC_3077;pseudo=true NC_017265.1 Protein Homology CDS 2974095 2978239 . + 0 ID=cds2684;Parent=gene2757;exception=annotated by transcript or proteomic data;gbkey=CDS;product=autotransporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 2978797 2981793 . + . ID=gene2758;Name=YPC_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13835;old_locus_tag=YPC_3080 NC_017265.1 Protein Homology CDS 2978797 2981793 . + 0 ID=cds2685;Parent=gene2758;Dbxref=Genbank:WP_002228388.1;Name=WP_002228388.1;gbkey=CDS;product=pertactin;protein_id=WP_002228388.1;transl_table=11 NC_017265.1 RefSeq gene 2981759 2982079 . + . ID=gene2759;Name=YPC_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13840;old_locus_tag=YPC_3081 NC_017265.1 Protein Homology CDS 2981759 2982079 . + 0 ID=cds2686;Parent=gene2759;Dbxref=Genbank:WP_002215505.1;Name=WP_002215505.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215505.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2982211 2982381 . + . ID=id237;gbkey=repeat_region NC_017265.1 RefSeq gene 2982417 2983370 . - . ID=gene2760;Name=YPC_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13845;old_locus_tag=YPC_3083 NC_017265.1 Protein Homology CDS 2982417 2983370 . - 0 ID=cds2687;Parent=gene2760;Dbxref=Genbank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_002209828.1;transl_table=11 NC_017265.1 RefSeq gene 2983449 2984747 . - . ID=gene2761;Name=YPC_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13850;old_locus_tag=YPC_3084 NC_017265.1 Protein Homology CDS 2983449 2984747 . - 0 ID=cds2688;Parent=gene2761;Dbxref=Genbank:WP_002209829.1;Name=WP_002209829.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_002209829.1;transl_table=11 NC_017265.1 RefSeq gene 2984887 2985087 . - . ID=gene2762;Name=YPC_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13855;old_locus_tag=YPC_3086 NC_017265.1 Protein Homology CDS 2984887 2985087 . - 0 ID=cds2689;Parent=gene2762;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11 NC_017265.1 RefSeq gene 2985117 2985452 . - . ID=gene2763;Name=YPC_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13860;old_locus_tag=YPC_3087 NC_017265.1 Protein Homology CDS 2985117 2985452 . - 0 ID=cds2690;Parent=gene2763;Dbxref=Genbank:WP_015683702.1;Name=WP_015683702.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_015683702.1;transl_table=11 NC_017265.1 RefSeq gene 2985455 2987245 . - . ID=gene2764;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YPC_RS13865;old_locus_tag=YPC_3088 NC_017265.1 Protein Homology CDS 2985455 2987245 . - 0 ID=cds2691;Parent=gene2764;Dbxref=Genbank:WP_042468833.1;Name=WP_042468833.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_042468833.1;transl_table=11 NC_017265.1 RefSeq gene 2987650 2988174 . - . ID=gene2765;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YPC_RS13870;old_locus_tag=YPC_3089 NC_017265.1 Protein Homology CDS 2987650 2988174 . - 0 ID=cds2692;Parent=gene2765;Dbxref=Genbank:WP_002209833.1;Name=WP_002209833.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_002209833.1;transl_table=11 NC_017265.1 RefSeq gene 2988285 2988608 . - . ID=gene2766;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YPC_RS13875;old_locus_tag=YPC_3090 NC_017265.1 Protein Homology CDS 2988285 2988608 . - 0 ID=cds2693;Parent=gene2766;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11 NC_017265.1 RefSeq gene 2988878 2989264 . - . ID=gene2767;Name=YPC_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13880;old_locus_tag=YPC_3091 NC_017265.1 Protein Homology CDS 2988878 2989264 . - 0 ID=cds2694;Parent=gene2767;Dbxref=Genbank:WP_002209835.1;Name=WP_002209835.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NC_017265.1 RefSeq gene 2989295 2990524 . - . ID=gene2768;Name=YPC_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13885;old_locus_tag=YPC_3092 NC_017265.1 Protein Homology CDS 2989295 2990524 . - 0 ID=cds2695;Parent=gene2768;Dbxref=Genbank:WP_002209836.1;Name=WP_002209836.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002209836.1;transl_table=11 NC_017265.1 RefSeq gene 2990578 2991072 . - . ID=gene2769;Name=YPC_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13890;old_locus_tag=YPC_3093 NC_017265.1 Protein Homology CDS 2990578 2991072 . - 0 ID=cds2696;Parent=gene2769;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NC_017265.1 RefSeq gene 2991228 2992001 . - . ID=gene2770;Name=YPC_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13895;old_locus_tag=YPC_3094 NC_017265.1 Protein Homology CDS 2991228 2992001 . - 0 ID=cds2697;Parent=gene2770;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NC_017265.1 RefSeq gene 2992120 2992923 . + . ID=gene2771;Name=YPC_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13900;old_locus_tag=YPC_3095 NC_017265.1 Protein Homology CDS 2992120 2992923 . + 0 ID=cds2698;Parent=gene2771;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11 NC_017265.1 RefSeq repeat_region 2992975 2993697 . + . ID=id238;gbkey=repeat_region NC_017265.1 RefSeq gene 2993128 2993586 . + . ID=gene2772;Name=YPC_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13905;old_locus_tag=YPC_3097 NC_017265.1 Protein Homology CDS 2993128 2993586 . + 0 ID=cds2699;Parent=gene2772;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 2993732 2994754 . - . ID=gene2773;Name=YPC_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13910;old_locus_tag=YPC_3098 NC_017265.1 Protein Homology CDS 2993732 2994754 . - 0 ID=cds2700;Parent=gene2773;Dbxref=Genbank:WP_002213308.1;Name=WP_002213308.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002213308.1;transl_table=11 NC_017265.1 RefSeq gene 2994745 2995419 . - . ID=gene2774;Name=YPC_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13915;old_locus_tag=YPC_3099 NC_017265.1 Protein Homology CDS 2994745 2995419 . - 0 ID=cds2701;Parent=gene2774;Dbxref=Genbank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213310.1;transl_table=11 NC_017265.1 RefSeq gene 2995561 2996937 . + . ID=gene2775;Name=YPC_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13920;old_locus_tag=YPC_3100 NC_017265.1 Protein Homology CDS 2995561 2996937 . + 0 ID=cds2702;Parent=gene2775;Dbxref=Genbank:WP_002223390.1;Name=WP_002223390.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_002223390.1;transl_table=11 NC_017265.1 RefSeq gene 2996934 2998091 . - . ID=gene2776;Name=YPC_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13925;old_locus_tag=YPC_3101 NC_017265.1 Protein Homology CDS 2996934 2998091 . - 0 ID=cds2703;Parent=gene2776;Dbxref=Genbank:WP_002213316.1;Name=WP_002213316.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=WP_002213316.1;transl_table=11 NC_017265.1 RefSeq gene 2998443 2998982 . - . ID=gene2777;Name=YPC_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13930;old_locus_tag=YPC_3103 NC_017265.1 Protein Homology CDS 2998443 2998982 . - 0 ID=cds2704;Parent=gene2777;Dbxref=Genbank:WP_016257063.1;Name=WP_016257063.1;gbkey=CDS;product=attachment protein;protein_id=WP_016257063.1;transl_table=11 NC_017265.1 RefSeq gene 2999101 2999283 . - . ID=gene2778;Name=YPC_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13935;old_locus_tag=YPC_3104 NC_017265.1 Protein Homology CDS 2999101 2999283 . - 0 ID=cds2705;Parent=gene2778;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11 NC_017265.1 RefSeq gene 2999435 3000688 . - . ID=gene2779;Name=YPC_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13940;old_locus_tag=YPC_3105 NC_017265.1 Protein Homology CDS 2999435 3000688 . - 0 ID=cds2706;Parent=gene2779;Dbxref=Genbank:WP_002211552.1;Name=WP_002211552.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NC_017265.1 RefSeq gene 3001229 3002419 . + . ID=gene2780;Name=YPC_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13945;old_locus_tag=YPC_3106 NC_017265.1 Protein Homology CDS 3001229 3002419 . + 0 ID=cds2707;Parent=gene2780;Dbxref=Genbank:WP_002211553.1;Name=WP_002211553.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=flavohemoprotein;protein_id=WP_002211553.1;transl_table=11 NC_017265.1 RefSeq gene 3002883 3003782 . + . ID=gene2781;Name=YPC_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13950;old_locus_tag=YPC_3107 NC_017265.1 Protein Homology CDS 3002883 3003782 . + 0 ID=cds2708;Parent=gene2781;Dbxref=Genbank:WP_011192818.1;Name=WP_011192818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192818.1;transl_table=11 NC_017265.1 RefSeq gene 3003951 3004289 . - . ID=gene2782;Name=YPC_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13955;old_locus_tag=YPC_3108 NC_017265.1 Protein Homology CDS 3003951 3004289 . - 0 ID=cds2709;Parent=gene2782;Dbxref=Genbank:WP_002211554.1;Name=WP_002211554.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002211554.1;transl_table=11 NC_017265.1 RefSeq gene 3004304 3005926 . - . ID=gene2783;Name=YPC_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13960;old_locus_tag=YPC_3109 NC_017265.1 Protein Homology CDS 3004304 3005926 . - 0 ID=cds2710;Parent=gene2783;Dbxref=Genbank:WP_002211555.1;Name=WP_002211555.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_002211555.1;transl_table=11 NC_017265.1 RefSeq gene 3006086 3007423 . - . ID=gene2784;Name=YPC_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13965;old_locus_tag=YPC_3110 NC_017265.1 Protein Homology CDS 3006086 3007423 . - 0 ID=cds2711;Parent=gene2784;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11 NC_017265.1 RefSeq gene 3007386 3008453 . - . ID=gene2785;Name=YPC_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13970;old_locus_tag=YPC_3111 NC_017265.1 Protein Homology CDS 3007386 3008453 . - 0 ID=cds2712;Parent=gene2785;Dbxref=Genbank:WP_002430124.1;Name=WP_002430124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002430124.1;transl_table=11 NC_017265.1 RefSeq gene 3008457 3009893 . - . ID=gene2786;Name=YPC_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13975;old_locus_tag=YPC_3112 NC_017265.1 Protein Homology CDS 3008457 3009893 . - 0 ID=cds2713;Parent=gene2786;Dbxref=Genbank:WP_002216114.1;Name=WP_002216114.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3010003 3010724 . + . ID=id239;gbkey=repeat_region NC_017265.1 RefSeq gene 3010114 3010572 . - . ID=gene2787;Name=YPC_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13980;old_locus_tag=YPC_3113 NC_017265.1 Protein Homology CDS 3010114 3010572 . - 0 ID=cds2714;Parent=gene2787;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 3010562 3010780 . - . ID=gene2788;Name=YPC_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13985 NC_017265.1 Protein Homology CDS 3010562 3010780 . - 0 ID=cds2715;Parent=gene2788;Dbxref=Genbank:WP_042468836.1;Name=WP_042468836.1;gbkey=CDS;product=transposase;protein_id=WP_042468836.1;transl_table=11 NC_017265.1 RefSeq gene 3011799 3012359 . + . ID=gene2789;Name=YPC_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13990;old_locus_tag=YPC_3116 NC_017265.1 Protein Homology CDS 3011799 3012359 . + 0 ID=cds2716;Parent=gene2789;Dbxref=Genbank:WP_002211559.1;Name=WP_002211559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211559.1;transl_table=11 NC_017265.1 RefSeq gene 3012811 3013260 . + . ID=gene2790;Name=YPC_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS13995 NC_017265.1 Protein Homology CDS 3012811 3013260 . + 0 ID=cds2717;Parent=gene2790;Dbxref=Genbank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3013467 3013641 . + . ID=id240;gbkey=repeat_region NC_017265.1 RefSeq gene 3013672 3017562 . - . ID=gene2791;Name=YPC_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14000;old_locus_tag=YPC_3119 NC_017265.1 Protein Homology CDS 3013672 3017562 . - 0 ID=cds2718;Parent=gene2791;Dbxref=Genbank:WP_002223376.1;Name=WP_002223376.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_002223376.1;transl_table=11 NC_017265.1 RefSeq gene 3017878 3019338 . + . ID=gene2792;Name=YPC_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14005;old_locus_tag=YPC_3120 NC_017265.1 Protein Homology CDS 3017878 3019338 . + 0 ID=cds2719;Parent=gene2792;Dbxref=Genbank:WP_002211562.1;Name=WP_002211562.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002211562.1;transl_table=11 NC_017265.1 RefSeq gene 3019447 3020049 . - . ID=gene2793;Name=YPC_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14010;old_locus_tag=YPC_3121 NC_017265.1 Protein Homology CDS 3019447 3020049 . - 0 ID=cds2720;Parent=gene2793;Dbxref=Genbank:WP_002211563.1;Name=WP_002211563.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_002211563.1;transl_table=11 NC_017265.1 RefSeq gene 3020120 3020815 . - . ID=gene2794;Name=YPC_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14015;old_locus_tag=YPC_3122 NC_017265.1 Protein Homology CDS 3020120 3020815 . - 0 ID=cds2721;Parent=gene2794;Dbxref=Genbank:WP_002211564.1;Name=WP_002211564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211564.1;transl_table=11 NC_017265.1 RefSeq gene 3021042 3021929 . - . ID=gene2795;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=YPC_RS14020;old_locus_tag=YPC_3123 NC_017265.1 Protein Homology CDS 3021042 3021929 . - 0 ID=cds2722;Parent=gene2795;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NC_017265.1 RefSeq gene 3022137 3022976 . + . ID=gene2796;Name=YPC_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14025;old_locus_tag=YPC_3124 NC_017265.1 Protein Homology CDS 3022137 3022976 . + 0 ID=cds2723;Parent=gene2796;Dbxref=Genbank:WP_002211566.1;Name=WP_002211566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NC_017265.1 RefSeq gene 3023138 3023398 . + . ID=gene2797;Name=YPC_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14030;old_locus_tag=YPC_3125 NC_017265.1 Protein Homology CDS 3023138 3023398 . + 0 ID=cds2724;Parent=gene2797;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3023444 3024161 . + . ID=id241;gbkey=repeat_region NC_017265.1 RefSeq gene 3023554 3024012 . - . ID=gene2798;Name=YPC_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14035;old_locus_tag=YPC_3126 NC_017265.1 Protein Homology CDS 3023554 3024012 . - 0 ID=cds2725;Parent=gene2798;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3024002 3024157 . - . ID=gene2799;Name=YPC_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14040 NC_017265.1 Protein Homology CDS 3024002 3024157 . - 0 ID=cds2726;Parent=gene2799;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 3024214 3024594 . - . ID=gene2800;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YPC_RS14045;old_locus_tag=YPC_3128 NC_017265.1 Protein Homology CDS 3024214 3024594 . - 0 ID=cds2727;Parent=gene2800;Dbxref=Genbank:WP_002211568.1;Name=WP_002211568.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_002211568.1;transl_table=11 NC_017265.1 RefSeq gene 3024594 3025325 . - . ID=gene2801;Name=YPC_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14050;old_locus_tag=YPC_3129 NC_017265.1 Protein Homology CDS 3024594 3025325 . - 0 ID=cds2728;Parent=gene2801;Dbxref=Genbank:WP_002211569.1;Name=WP_002211569.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_002211569.1;transl_table=11 NC_017265.1 RefSeq gene 3025484 3026209 . - . ID=gene2802;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YPC_RS14055;old_locus_tag=YPC_3130 NC_017265.1 Protein Homology CDS 3025484 3026209 . - 0 ID=cds2729;Parent=gene2802;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NC_017265.1 RefSeq gene 3026219 3027130 . - . ID=gene2803;Name=YPC_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14060;old_locus_tag=YPC_3131 NC_017265.1 Protein Homology CDS 3026219 3027130 . - 0 ID=cds2730;Parent=gene2803;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NC_017265.1 RefSeq gene 3027127 3027807 . - . ID=gene2804;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YPC_RS14065;old_locus_tag=YPC_3132 NC_017265.1 Protein Homology CDS 3027127 3027807 . - 0 ID=cds2731;Parent=gene2804;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11 NC_017265.1 RefSeq gene 3028159 3029157 . - . ID=gene2805;Name=YPC_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14070;old_locus_tag=YPC_3133 NC_017265.1 Protein Homology CDS 3028159 3029157 . - 0 ID=cds2732;Parent=gene2805;Dbxref=Genbank:WP_002209678.1;Name=WP_002209678.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11 NC_017265.1 RefSeq gene 3029167 3030966 . - . ID=gene2806;Name=YPC_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14075;old_locus_tag=YPC_3134 NC_017265.1 Protein Homology CDS 3029167 3030966 . - 0 ID=cds2733;Parent=gene2806;Dbxref=Genbank:WP_002209677.1;Name=WP_002209677.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NC_017265.1 RefSeq gene 3031466 3032320 . + . ID=gene2807;Name=YPC_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14080;old_locus_tag=YPC_3135 NC_017265.1 Protein Homology CDS 3031466 3032320 . + 0 ID=cds2734;Parent=gene2807;Dbxref=Genbank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209676.1;transl_table=11 NC_017265.1 RefSeq gene 3032341 3032796 . - . ID=gene2808;Name=YPC_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14085;old_locus_tag=YPC_3136 NC_017265.1 Protein Homology CDS 3032341 3032796 . - 0 ID=cds2735;Parent=gene2808;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NC_017265.1 RefSeq gene 3032793 3033749 . - . ID=gene2809;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YPC_RS14090 NC_017265.1 Protein Homology CDS 3032793 3033749 . - 0 ID=cds2736;Parent=gene2809;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11 NC_017265.1 RefSeq gene 3033749 3034405 . - . ID=gene2810;Name=YPC_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14095 NC_017265.1 Protein Homology CDS 3033749 3034405 . - 0 ID=cds2737;Parent=gene2810;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11 NC_017265.1 RefSeq gene 3034431 3035006 . - . ID=gene2811;Name=YPC_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14100;old_locus_tag=YPC_3139 NC_017265.1 Protein Homology CDS 3034431 3035006 . - 0 ID=cds2738;Parent=gene2811;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11 NC_017265.1 RefSeq gene 3035194 3036831 . + . ID=gene2812;Name=YPC_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14105;old_locus_tag=YPC_3140 NC_017265.1 Protein Homology CDS 3035194 3036831 . + 0 ID=cds2739;Parent=gene2812;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3036870 3037046 . + . ID=id242;gbkey=repeat_region NC_017265.1 RefSeq gene 3037114 3037860 . - . ID=gene2813;Name=YPC_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14110;old_locus_tag=YPC_3141 NC_017265.1 Protein Homology CDS 3037114 3037860 . - 0 ID=cds2740;Parent=gene2813;Dbxref=Genbank:WP_002209670.1;Name=WP_002209670.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002209670.1;transl_table=11 NC_017265.1 RefSeq gene 3038112 3039437 . + . ID=gene2814;Name=YPC_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14115;old_locus_tag=YPC_3142 NC_017265.1 Protein Homology CDS 3038112 3039437 . + 0 ID=cds2741;Parent=gene2814;Dbxref=Genbank:WP_002209669.1;Name=WP_002209669.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002209669.1;transl_table=11 NC_017265.1 RefSeq gene 3039568 3040224 . - . ID=gene2815;Name=YPC_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14120;old_locus_tag=YPC_3144 NC_017265.1 Protein Homology CDS 3039568 3040224 . - 0 ID=cds2742;Parent=gene2815;Dbxref=Genbank:WP_002209667.1;Name=WP_002209667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209667.1;transl_table=11 NC_017265.1 RefSeq gene 3040211 3040309 . - . ID=gene2816;Name=YPC_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14125;old_locus_tag=YPC_3145 NC_017265.1 Protein Homology CDS 3040211 3040309 . - 0 ID=cds2743;Parent=gene2816;Dbxref=Genbank:WP_002228379.1;Name=WP_002228379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228379.1;transl_table=11 NC_017265.1 RefSeq gene 3040302 3041264 . - . ID=gene2817;Name=YPC_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14130;old_locus_tag=YPC_3146 NC_017265.1 Protein Homology CDS 3040302 3041264 . - 0 ID=cds2744;Parent=gene2817;Dbxref=Genbank:WP_002209665.1;Name=WP_002209665.1;gbkey=CDS;product=phospholipase A;protein_id=WP_002209665.1;transl_table=11 NC_017265.1 RefSeq gene 3041443 3041826 . - . ID=gene2818;Name=YPC_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14135;old_locus_tag=YPC_3148 NC_017265.1 Protein Homology CDS 3041443 3041826 . - 0 ID=cds2745;Parent=gene2818;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NC_017265.1 RefSeq gene 3042179 3042866 . + . ID=gene2819;Name=YPC_RS14140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS14140;pseudo=true NC_017265.1 Protein Homology CDS 3042179 3042866 . + 0 ID=cds2746;Parent=gene2819;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=uracil-DNA glycosylase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3042957 3043604 . - . ID=gene2820;Name=YPC_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14145;old_locus_tag=YPC_3151 NC_017265.1 Protein Homology CDS 3042957 3043604 . - 0 ID=cds2747;Parent=gene2820;Dbxref=Genbank:WP_002209662.1;Name=WP_002209662.1;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=WP_002209662.1;transl_table=11 NC_017265.1 RefSeq gene 3043614 3044633 . - . ID=gene2821;Name=YPC_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14150 NC_017265.1 Protein Homology CDS 3043614 3044633 . - 0 ID=cds2748;Parent=gene2821;Dbxref=Genbank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209661.1;transl_table=11 NC_017265.1 RefSeq gene 3044630 3045361 . - . ID=gene2822;Name=YPC_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14155 NC_017265.1 Protein Homology CDS 3044630 3045361 . - 0 ID=cds2749;Parent=gene2822;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11 NC_017265.1 RefSeq gene 3045446 3046184 . - . ID=gene2823;Name=YPC_RS14160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS14160;pseudo=true NC_017265.1 Protein Homology CDS 3045446 3046184 . - 0 ID=cds2750;Parent=gene2823;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lactam utilization protein LamB;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3046181 3047131 . - . ID=gene2824;Name=YPC_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14165;old_locus_tag=YPC_3156 NC_017265.1 Protein Homology CDS 3046181 3047131 . - 0 ID=cds2751;Parent=gene2824;Dbxref=Genbank:WP_002209658.1;Name=WP_002209658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209658.1;transl_table=11 NC_017265.1 RefSeq gene 3047125 3047781 . - . ID=gene2825;Name=YPC_RS14170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS14170;old_locus_tag=YPC_3157;pseudo=true NC_017265.1 Protein Homology CDS 3047125 3047781 . - 0 ID=cds2752;Parent=gene2825;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3047236..3047238)%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 3048400 3049143 . - . ID=gene2826;Name=YPC_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14175;old_locus_tag=YPC_3158 NC_017265.1 Protein Homology CDS 3048400 3049143 . - 0 ID=cds2753;Parent=gene2826;Dbxref=Genbank:WP_002354507.1;Name=WP_002354507.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_002354507.1;transl_table=11 NC_017265.1 RefSeq gene 3049286 3050323 . - . ID=gene2827;Name=YPC_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14180;old_locus_tag=YPC_3159 NC_017265.1 Protein Homology CDS 3049286 3050323 . - 0 ID=cds2754;Parent=gene2827;Dbxref=Genbank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002209656.1;transl_table=11 NC_017265.1 RefSeq gene 3050314 3051777 . - . ID=gene2828;Name=YPC_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14185;old_locus_tag=YPC_3160 NC_017265.1 Protein Homology CDS 3050314 3051777 . - 0 ID=cds2755;Parent=gene2828;Dbxref=Genbank:WP_002209655.1;Name=WP_002209655.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_002209655.1;transl_table=11 NC_017265.1 RefSeq gene 3051907 3052389 . - . ID=gene2829;Name=YPC_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14190;old_locus_tag=YPC_3161 NC_017265.1 Protein Homology CDS 3051907 3052389 . - 0 ID=cds2756;Parent=gene2829;Dbxref=Genbank:WP_002209654.1;Name=WP_002209654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209654.1;transl_table=11 NC_017265.1 RefSeq gene 3052728 3052934 . - . ID=gene2830;Name=YPC_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14195;old_locus_tag=YPC_3163 NC_017265.1 Protein Homology CDS 3052728 3052934 . - 0 ID=cds2757;Parent=gene2830;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11 NC_017265.1 RefSeq gene 3053100 3053342 . + . ID=gene2831;Name=YPC_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14200 NC_017265.1 Protein Homology CDS 3053100 3053342 . + 0 ID=cds2758;Parent=gene2831;Dbxref=Genbank:WP_002216017.1;Name=WP_002216017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216017.1;transl_table=11 NC_017265.1 RefSeq gene 3053339 3053428 . + . ID=gene2832;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=YPC_RS14205 NC_017265.1 Protein Homology CDS 3053339 3053428 . + 0 ID=cds2759;Parent=gene2832;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11 NC_017265.1 RefSeq gene 3053429 3055117 . + . ID=gene2833;Name=YPC_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14210;old_locus_tag=YPC_3164 NC_017265.1 Protein Homology CDS 3053429 3055117 . + 0 ID=cds2760;Parent=gene2833;Dbxref=Genbank:WP_002209652.1;Name=WP_002209652.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_002209652.1;transl_table=11 NC_017265.1 RefSeq gene 3055211 3057277 . + . ID=gene2834;Name=YPC_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14215;old_locus_tag=YPC_3165 NC_017265.1 Protein Homology CDS 3055211 3057277 . + 0 ID=cds2761;Parent=gene2834;Dbxref=Genbank:WP_002209651.1;Name=WP_002209651.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_002209651.1;transl_table=11 NC_017265.1 RefSeq gene 3057441 3058091 . + . ID=gene2835;Name=YPC_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14220;old_locus_tag=YPC_3166 NC_017265.1 Protein Homology CDS 3057441 3058091 . + 0 ID=cds2762;Parent=gene2835;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11 NC_017265.1 RefSeq gene 3058101 3060827 . + . ID=gene2836;Name=YPC_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14225;old_locus_tag=YPC_3167 NC_017265.1 Protein Homology CDS 3058101 3060827 . + 0 ID=cds2763;Parent=gene2836;Dbxref=Genbank:WP_015683703.1;Name=WP_015683703.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_015683703.1;transl_table=11 NC_017265.1 RefSeq gene 3061063 3061749 . + . ID=gene2837;Name=YPC_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14230;old_locus_tag=YPC_3168 NC_017265.1 Protein Homology CDS 3061063 3061749 . + 0 ID=cds2764;Parent=gene2837;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11 NC_017265.1 RefSeq gene 3061844 3062272 . + . ID=gene2838;Name=YPC_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14235;old_locus_tag=YPC_3169 NC_017265.1 Protein Homology CDS 3061844 3062272 . + 0 ID=cds2765;Parent=gene2838;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11 NC_017265.1 RefSeq gene 3062400 3062642 . - . ID=gene2839;Name=YPC_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14240;old_locus_tag=YPC_3170 NC_017265.1 Protein Homology CDS 3062400 3062642 . - 0 ID=cds2766;Parent=gene2839;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NC_017265.1 RefSeq gene 3062685 3062798 . - . ID=gene2840;Name=YPC_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14245;old_locus_tag=YPC_3171 NC_017265.1 Protein Homology CDS 3062685 3062798 . - 0 ID=cds2767;Parent=gene2840;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11 NC_017265.1 RefSeq gene 3063016 3064659 . - . ID=gene2841;Name=YPC_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14250;old_locus_tag=YPC_3172 NC_017265.1 Protein Homology CDS 3063016 3064659 . - 0 ID=cds2768;Parent=gene2841;Dbxref=Genbank:WP_015683704.1;Name=WP_015683704.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_015683704.1;transl_table=11 NC_017265.1 RefSeq gene 3064732 3065259 . - . ID=gene2842;Name=YPC_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14255;old_locus_tag=YPC_3173 NC_017265.1 Protein Homology CDS 3064732 3065259 . - 0 ID=cds2769;Parent=gene2842;Dbxref=Genbank:WP_002212248.1;Name=WP_002212248.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_002212248.1;transl_table=11 NC_017265.1 RefSeq gene 3065754 3066122 . + . ID=gene2843;Name=YPC_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14260;old_locus_tag=YPC_3174 NC_017265.1 Protein Homology CDS 3065754 3066122 . + 0 ID=cds2770;Parent=gene2843;Dbxref=Genbank:WP_002212246.1;Name=WP_002212246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212246.1;transl_table=11 NC_017265.1 RefSeq gene 3066234 3066410 . + . ID=gene2844;Name=YPC_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14265;old_locus_tag=YPC_3175 NC_017265.1 Protein Homology CDS 3066234 3066410 . + 0 ID=cds2771;Parent=gene2844;Dbxref=Genbank:WP_002212245.1;Name=WP_002212245.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212245.1;transl_table=11 NC_017265.1 RefSeq gene 3066417 3067178 . - . ID=gene2845;Name=YPC_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14270;old_locus_tag=YPC_3176 NC_017265.1 Protein Homology CDS 3066417 3067178 . - 0 ID=cds2772;Parent=gene2845;Dbxref=Genbank:WP_002212244.1;Name=WP_002212244.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11 NC_017265.1 RefSeq gene 3067230 3068060 . - . ID=gene2846;Name=YPC_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14275;old_locus_tag=YPC_3177 NC_017265.1 Protein Homology CDS 3067230 3068060 . - 0 ID=cds2773;Parent=gene2846;Dbxref=Genbank:WP_002212243.1;Name=WP_002212243.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212243.1;transl_table=11 NC_017265.1 RefSeq gene 3068109 3068456 . - . ID=gene2847;Name=YPC_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14280;old_locus_tag=YPC_3178 NC_017265.1 Protein Homology CDS 3068109 3068456 . - 0 ID=cds2774;Parent=gene2847;Dbxref=Genbank:WP_002212242.1;Name=WP_002212242.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIA;protein_id=WP_002212242.1;transl_table=11 NC_017265.1 RefSeq gene 3068623 3069984 . - . ID=gene2848;Name=YPC_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14285;old_locus_tag=YPC_3179 NC_017265.1 Protein Homology CDS 3068623 3069984 . - 0 ID=cds2775;Parent=gene2848;Dbxref=Genbank:WP_002212241.1;Name=WP_002212241.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NC_017265.1 RefSeq gene 3069995 3070312 . - . ID=gene2849;Name=YPC_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14290;old_locus_tag=YPC_3180 NC_017265.1 Protein Homology CDS 3069995 3070312 . - 0 ID=cds2776;Parent=gene2849;Dbxref=Genbank:WP_002212240.1;Name=WP_002212240.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_002212240.1;transl_table=11 NC_017265.1 RefSeq gene 3071085 3071264 . + . ID=gene2850;Name=YPC_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14295;old_locus_tag=YPC_3181 NC_017265.1 Protein Homology CDS 3071085 3071264 . + 0 ID=cds2777;Parent=gene2850;Dbxref=Genbank:WP_002212239.1;Name=WP_002212239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212239.1;transl_table=11 NC_017265.1 RefSeq gene 3071353 3071733 . + . ID=gene2851;Name=YPC_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14300;old_locus_tag=YPC_3182 NC_017265.1 Protein Homology CDS 3071353 3071733 . + 0 ID=cds2778;Parent=gene2851;Dbxref=Genbank:WP_002212238.1;Name=WP_002212238.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_002212238.1;transl_table=11 NC_017265.1 RefSeq gene 3071749 3072153 . + . ID=gene2852;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=YPC_RS14305;old_locus_tag=YPC_3183 NC_017265.1 Protein Homology CDS 3071749 3072153 . + 0 ID=cds2779;Parent=gene2852;Dbxref=Genbank:WP_002212237.1;Name=WP_002212237.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_002212237.1;transl_table=11 NC_017265.1 RefSeq gene 3072251 3073426 . - . ID=gene2853;Name=YPC_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14310;old_locus_tag=YPC_3184 NC_017265.1 Protein Homology CDS 3072251 3073426 . - 0 ID=cds2780;Parent=gene2853;Dbxref=Genbank:WP_002212236.1;Name=WP_002212236.1;gbkey=CDS;product=voltage-gated potassium channel;protein_id=WP_002212236.1;transl_table=11 NC_017265.1 RefSeq gene 3073815 3074045 . - . ID=gene2854;Name=YPC_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14315 NC_017265.1 Protein Homology CDS 3073815 3074045 . - 0 ID=cds2781;Parent=gene2854;Dbxref=Genbank:WP_002215289.1;Name=WP_002215289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215289.1;transl_table=11 NC_017265.1 RefSeq gene 3074044 3074373 . + . ID=gene2855;Name=YPC_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14320;old_locus_tag=YPC_3185 NC_017265.1 Protein Homology CDS 3074044 3074373 . + 0 ID=cds2782;Parent=gene2855;Dbxref=Genbank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_002212235.1;transl_table=11 NC_017265.1 RefSeq gene 3074542 3075600 . - . ID=gene2856;Name=YPC_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14325;old_locus_tag=YPC_3186 NC_017265.1 Protein Homology CDS 3074542 3075600 . - 0 ID=cds2783;Parent=gene2856;Dbxref=Genbank:WP_002212234.1;Name=WP_002212234.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002212234.1;transl_table=11 NC_017265.1 RefSeq gene 3075749 3076741 . - . ID=gene2857;Name=YPC_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14330;old_locus_tag=YPC_3187 NC_017265.1 Protein Homology CDS 3075749 3076741 . - 0 ID=cds2784;Parent=gene2857;Dbxref=Genbank:WP_002212233.1;Name=WP_002212233.1;gbkey=CDS;product=urea transporter;protein_id=WP_002212233.1;transl_table=11 NC_017265.1 RefSeq gene 3077066 3077899 . - . ID=gene2858;Name=YPC_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14335 NC_017265.1 Protein Homology CDS 3077066 3077899 . - 0 ID=cds2785;Parent=gene2858;Dbxref=Genbank:WP_002228375.1;Name=WP_002228375.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_002228375.1;transl_table=11 NC_017265.1 RefSeq gene 3077896 3078558 . - . ID=gene2859;Name=YPC_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14340;old_locus_tag=YPC_3190 NC_017265.1 Protein Homology CDS 3077896 3078558 . - 0 ID=cds2786;Parent=gene2859;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NC_017265.1 RefSeq gene 3078685 3079371 . - . ID=gene2860;Name=YPC_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14345;old_locus_tag=YPC_3191 NC_017265.1 Protein Homology CDS 3078685 3079371 . - 0 ID=cds2787;Parent=gene2860;Dbxref=Genbank:WP_002212231.1;Name=WP_002212231.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_002212231.1;transl_table=11 NC_017265.1 RefSeq gene 3079393 3080088 . - . ID=gene2861;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YPC_RS14350;old_locus_tag=YPC_3192 NC_017265.1 Protein Homology CDS 3079393 3080088 . - 0 ID=cds2788;Parent=gene2861;Dbxref=Genbank:WP_002212230.1;Name=WP_002212230.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_002212230.1;transl_table=11 NC_017265.1 RefSeq gene 3080384 3082102 . - . ID=gene2862;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=YPC_RS14355;old_locus_tag=YPC_3193 NC_017265.1 Protein Homology CDS 3080384 3082102 . - 0 ID=cds2789;Parent=gene2862;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NC_017265.1 RefSeq gene 3082192 3082626 . - . ID=gene2863;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YPC_RS14360;old_locus_tag=YPC_3194 NC_017265.1 Protein Homology CDS 3082192 3082626 . - 0 ID=cds2790;Parent=gene2863;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NC_017265.1 RefSeq gene 3082679 3082981 . - . ID=gene2864;Name=YPC_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14365;old_locus_tag=YPC_3195 NC_017265.1 Protein Homology CDS 3082679 3082981 . - 0 ID=cds2791;Parent=gene2864;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NC_017265.1 RefSeq gene 3084179 3084844 . - . ID=gene2865;Name=YPC_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14370 NC_017265.1 Protein Homology CDS 3084179 3084844 . - 0 ID=cds2792;Parent=gene2865;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11 NC_017265.1 RefSeq gene 3084837 3085643 . - . ID=gene2866;Name=YPC_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14375 NC_017265.1 Protein Homology CDS 3084837 3085643 . - 0 ID=cds2793;Parent=gene2866;Dbxref=Genbank:WP_002212225.1;Name=WP_002212225.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002212225.1;transl_table=11 NC_017265.1 RefSeq gene 3085643 3086449 . - . ID=gene2867;Name=YPC_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14380;old_locus_tag=YPC_3199 NC_017265.1 Protein Homology CDS 3085643 3086449 . - 0 ID=cds2794;Parent=gene2867;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NC_017265.1 RefSeq gene 3086446 3087429 . - . ID=gene2868;Name=YPC_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14385;old_locus_tag=YPC_3200 NC_017265.1 Protein Homology CDS 3086446 3087429 . - 0 ID=cds2795;Parent=gene2868;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11 NC_017265.1 RefSeq gene 3087414 3088991 . - . ID=gene2869;Name=YPC_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14390;old_locus_tag=YPC_3201 NC_017265.1 Protein Homology CDS 3087414 3088991 . - 0 ID=cds2796;Parent=gene2869;Dbxref=Genbank:WP_002215276.1;Name=WP_002215276.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002215276.1;transl_table=11 NC_017265.1 cmsearch region 3089727 3090188 . - . ID=id243;Note=cspA;gbkey=misc_feature NC_017265.1 RefSeq gene 3089798 3090010 . - . ID=gene2870;Name=YPC_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14395;old_locus_tag=YPC_3203 NC_017265.1 Protein Homology CDS 3089798 3090010 . - 0 ID=cds2797;Parent=gene2870;Dbxref=Genbank:WP_002212220.1;Name=WP_002212220.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_002212220.1;transl_table=11 NC_017265.1 RefSeq gene 3090518 3090856 . + . ID=gene2871;Name=YPC_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14400;old_locus_tag=YPC_3204 NC_017265.1 Protein Homology CDS 3090518 3090856 . + 0 ID=cds2798;Parent=gene2871;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11 NC_017265.1 RefSeq gene 3091021 3091470 . + . ID=gene2872;Name=YPC_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14405;old_locus_tag=YPC_3205 NC_017265.1 Protein Homology CDS 3091021 3091470 . + 0 ID=cds2799;Parent=gene2872;Dbxref=Genbank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212217.1;transl_table=11 NC_017265.1 RefSeq gene 3091568 3091903 . - . ID=gene2873;Name=YPC_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14410;old_locus_tag=YPC_3206 NC_017265.1 Protein Homology CDS 3091568 3091903 . - 0 ID=cds2800;Parent=gene2873;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11 NC_017265.1 RefSeq gene 3092381 3092746 . - . ID=gene2874;Name=YPC_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14415;old_locus_tag=YPC_3207 NC_017265.1 Protein Homology CDS 3092381 3092746 . - 0 ID=cds2801;Parent=gene2874;Dbxref=Genbank:WP_002212215.1;Name=WP_002212215.1;gbkey=CDS;product=acid shock protein;protein_id=WP_002212215.1;transl_table=11 NC_017265.1 RefSeq gene 3093267 3093503 . + . ID=gene2875;Name=YPC_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14420;old_locus_tag=YPC_3208 NC_017265.1 Protein Homology CDS 3093267 3093503 . + 0 ID=cds2802;Parent=gene2875;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11 NC_017265.1 RefSeq gene 3093517 3093921 . + . ID=gene2876;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YPC_RS14425;old_locus_tag=YPC_3209 NC_017265.1 Protein Homology CDS 3093517 3093921 . + 0 ID=cds2803;Parent=gene2876;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11 NC_017265.1 RefSeq gene 3093903 3096053 . + . ID=gene2877;Name=YPC_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14430;old_locus_tag=YPC_3210 NC_017265.1 Protein Homology CDS 3093903 3096053 . + 0 ID=cds2804;Parent=gene2877;Dbxref=Genbank:WP_002212212.1;Name=WP_002212212.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002212212.1;transl_table=11 NC_017265.1 RefSeq gene 3096178 3097149 . + . ID=gene2878;Name=YPC_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14435;old_locus_tag=YPC_3211 NC_017265.1 Protein Homology CDS 3096178 3097149 . + 0 ID=cds2805;Parent=gene2878;Dbxref=Genbank:WP_002212211.1;Name=WP_002212211.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NC_017265.1 RefSeq gene 3097825 3099024 . + . ID=gene2879;Name=YPC_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14440;old_locus_tag=YPC_3213 NC_017265.1 Protein Homology CDS 3097825 3099024 . + 0 ID=cds2806;Parent=gene2879;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11 NC_017265.1 RefSeq gene 3099017 3100183 . + . ID=gene2880;Name=YPC_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14445;old_locus_tag=YPC_3214 NC_017265.1 Protein Homology CDS 3099017 3100183 . + 0 ID=cds2807;Parent=gene2880;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11 NC_017265.1 RefSeq gene 3100231 3101235 . + . ID=gene2881;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YPC_RS14450;old_locus_tag=YPC_3215 NC_017265.1 Protein Homology CDS 3100231 3101235 . + 0 ID=cds2808;Parent=gene2881;Dbxref=Genbank:WP_002215933.1;Name=WP_002215933.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002215933.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3101266 3101436 . + . ID=id244;gbkey=repeat_region NC_017265.1 RefSeq gene 3101465 3102202 . - . ID=gene2882;Name=YPC_RS14455;end_range=3102202,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS14455;old_locus_tag=YPC_3217;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 3101465 3102202 . - 0 ID=cds2809;Parent=gene2882;end_range=3102202,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=allantoinase;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 3102200 3104158 . + . ID=id245;gbkey=repeat_region NC_017265.1 RefSeq gene 3102289 3103311 . + . ID=gene2883;Name=YPC_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14460;old_locus_tag=YPC_3218 NC_017265.1 Protein Homology CDS 3102289 3103311 . + 0 ID=cds2810;Parent=gene2883;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 3103311 3104090 . + . ID=gene2884;Name=YPC_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14465;old_locus_tag=YPC_3219 NC_017265.1 Protein Homology CDS 3103311 3104090 . + 0 ID=cds2811;Parent=gene2884;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 3104103 3104567 . + . ID=gene2885;Name=YPC_RS14470;end_range=3104567,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS14470;old_locus_tag=YPC_3220;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 3104103 3104567 . + 0 ID=cds2812;Parent=gene2885;end_range=3104567,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3104637 3104900 . + . ID=gene2886;Name=YPC_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14475;old_locus_tag=YPC_3221 NC_017265.1 Protein Homology CDS 3104637 3104900 . + 0 ID=cds2813;Parent=gene2886;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11 NC_017265.1 RefSeq gene 3104983 3105168 . + . ID=gene2887;Name=YPC_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14480;old_locus_tag=YPC_3222 NC_017265.1 Protein Homology CDS 3104983 3105168 . + 0 ID=cds2814;Parent=gene2887;Dbxref=Genbank:WP_002215393.1;Name=WP_002215393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215393.1;transl_table=11 NC_017265.1 RefSeq gene 3105331 3105582 . - . ID=gene2888;Name=YPC_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14485 NC_017265.1 Protein Homology CDS 3105331 3105582 . - 0 ID=cds2815;Parent=gene2888;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NC_017265.1 RefSeq gene 3106293 3107060 . + . ID=gene2889;Name=YPC_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14490;old_locus_tag=YPC_3225 NC_017265.1 Protein Homology CDS 3106293 3107060 . + 0 ID=cds2816;Parent=gene2889;Dbxref=Genbank:WP_002215390.1;Name=WP_002215390.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002215390.1;transl_table=11 NC_017265.1 RefSeq gene 3107212 3107337 . - . ID=gene2890;Name=YPC_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14495 NC_017265.1 Protein Homology CDS 3107212 3107337 . - 0 ID=cds2817;Parent=gene2890;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11 NC_017265.1 RefSeq gene 3107392 3107679 . + . ID=gene2891;Name=YPC_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14500;old_locus_tag=YPC_3227 NC_017265.1 Protein Homology CDS 3107392 3107679 . + 0 ID=cds2818;Parent=gene2891;Dbxref=Genbank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NC_017265.1 RefSeq gene 3108096 3108623 . + . ID=gene2892;Name=YPC_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14505;old_locus_tag=YPC_3229 NC_017265.1 Protein Homology CDS 3108096 3108623 . + 0 ID=cds2819;Parent=gene2892;Dbxref=Genbank:WP_002215386.1;Name=WP_002215386.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002215386.1;transl_table=11 NC_017265.1 RefSeq gene 3108990 3109436 . + . ID=gene2893;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YPC_RS14510;old_locus_tag=YPC_3230 NC_017265.1 Protein Homology CDS 3108990 3109436 . + 0 ID=cds2820;Parent=gene2893;Dbxref=Genbank:WP_002210357.1;Name=WP_002210357.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulation protein;protein_id=WP_002210357.1;transl_table=11 NC_017265.1 RefSeq gene 3109877 3112541 . - . ID=gene2894;Name=YPC_RS14515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS14515;pseudo=true NC_017265.1 Protein Homology CDS 3109877 3112541 . - 0 ID=cds2821;Parent=gene2894;exception=annotated by transcript or proteomic data;gbkey=CDS;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3112869 3114290 . - . ID=gene2895;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YPC_RS14520;old_locus_tag=YPC_3234 NC_017265.1 Protein Homology CDS 3112869 3114290 . - 0 ID=cds2822;Parent=gene2895;Dbxref=Genbank:WP_002210355.1;Name=WP_002210355.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=porin;protein_id=WP_002210355.1;transl_table=11 NC_017265.1 RefSeq gene 3114996 3116663 . - . ID=gene2896;Name=YPC_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14525;old_locus_tag=YPC_3235 NC_017265.1 Protein Homology CDS 3114996 3116663 . - 0 ID=cds2823;Parent=gene2896;Dbxref=Genbank:WP_015683705.1;Name=WP_015683705.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_015683705.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3116753 3117476 . + . ID=id246;gbkey=repeat_region NC_017265.1 RefSeq gene 3116865 3117374 . - . ID=gene2897;Name=YPC_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14530;old_locus_tag=YPC_3236 NC_017265.1 Protein Homology CDS 3116865 3117374 . - 0 ID=cds2824;Parent=gene2897;Dbxref=Genbank:WP_015683706.1;Name=WP_015683706.1;gbkey=CDS;product=transposase;protein_id=WP_015683706.1;transl_table=11 NC_017265.1 RefSeq gene 3117588 3119621 . - . ID=gene2898;Name=YPC_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14535;old_locus_tag=YPC_3238 NC_017265.1 Protein Homology CDS 3117588 3119621 . - 0 ID=cds2825;Parent=gene2898;Dbxref=Genbank:WP_002210353.1;Name=WP_002210353.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetylglucosamine transporter subunit IIABC;protein_id=WP_002210353.1;transl_table=11 NC_017265.1 RefSeq gene 3120021 3120821 . + . ID=gene2899;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YPC_RS14540;old_locus_tag=YPC_3239 NC_017265.1 Protein Homology CDS 3120021 3120821 . + 0 ID=cds2826;Parent=gene2899;Dbxref=Genbank:WP_002210352.1;Name=WP_002210352.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_002210352.1;transl_table=11 NC_017265.1 RefSeq gene 3120841 3121986 . + . ID=gene2900;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPC_RS14545;old_locus_tag=YPC_3240 NC_017265.1 Protein Homology CDS 3120841 3121986 . + 0 ID=cds2827;Parent=gene2900;Dbxref=Genbank:WP_002210351.1;Name=WP_002210351.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11 NC_017265.1 RefSeq gene 3122003 3123229 . + . ID=gene2901;Name=YPC_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14550;old_locus_tag=YPC_3241 NC_017265.1 Protein Homology CDS 3122003 3123229 . + 0 ID=cds2828;Parent=gene2901;Dbxref=Genbank:WP_002224863.1;Name=WP_002224863.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002224863.1;transl_table=11 NC_017265.1 RefSeq gene 3123302 3124054 . + . ID=gene2902;Name=YPC_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14555;old_locus_tag=YPC_3242 NC_017265.1 Protein Homology CDS 3123302 3124054 . + 0 ID=cds2829;Parent=gene2902;Dbxref=Genbank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_002210349.1;transl_table=11 NC_017265.1 RefSeq gene 3124409 3126073 . + . ID=gene2903;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YPC_RS14560;old_locus_tag=YPC_3244 NC_017265.1 Protein Homology CDS 3124409 3126073 . + 0 ID=cds2830;Parent=gene2903;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11 NC_017265.1 RefSeq gene 3126122 3126259 . - . ID=gene2904;Name=YPC_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14565;old_locus_tag=YPC_3245 NC_017265.1 Protein Homology CDS 3126122 3126259 . - 0 ID=cds2831;Parent=gene2904;Dbxref=Genbank:WP_002222587.1;Name=WP_002222587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222587.1;transl_table=11 NC_017265.1 RefSeq gene 3126531 3126607 . + . ID=gene2905;Name=YPC_RS14570;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS14570;old_locus_tag=YPC_3246 NC_017265.1 tRNAscan-SE tRNA 3126531 3126607 . + . ID=rna69;Parent=gene2905;anticodon=(pos:3126565..3126567);gbkey=tRNA;product=tRNA-Met NC_017265.1 tRNAscan-SE exon 3126531 3126607 . + . ID=id247;Parent=rna69;anticodon=(pos:3126565..3126567);gbkey=tRNA;product=tRNA-Met NC_017265.1 RefSeq gene 3126615 3126699 . + . ID=gene2906;Name=YPC_RS14575;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS14575;old_locus_tag=YPC_3247 NC_017265.1 tRNAscan-SE tRNA 3126615 3126699 . + . ID=rna70;Parent=gene2906;anticodon=(pos:3126649..3126651);gbkey=tRNA;product=tRNA-Leu NC_017265.1 tRNAscan-SE exon 3126615 3126699 . + . ID=id248;Parent=rna70;anticodon=(pos:3126649..3126651);gbkey=tRNA;product=tRNA-Leu NC_017265.1 RefSeq gene 3126729 3126803 . + . ID=gene2907;Name=YPC_RS14580;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS14580;old_locus_tag=YPC_3248 NC_017265.1 tRNAscan-SE tRNA 3126729 3126803 . + . ID=rna71;Parent=gene2907;anticodon=(pos:3126761..3126763);gbkey=tRNA;product=tRNA-Gln NC_017265.1 tRNAscan-SE exon 3126729 3126803 . + . ID=id249;Parent=rna71;anticodon=(pos:3126761..3126763);gbkey=tRNA;product=tRNA-Gln NC_017265.1 RefSeq gene 3126887 3126961 . + . ID=gene2908;Name=YPC_RS14585;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS14585;old_locus_tag=YPC_3249 NC_017265.1 tRNAscan-SE tRNA 3126887 3126961 . + . ID=rna72;Parent=gene2908;anticodon=(pos:3126919..3126921);gbkey=tRNA;product=tRNA-Gln NC_017265.1 tRNAscan-SE exon 3126887 3126961 . + . ID=id250;Parent=rna72;anticodon=(pos:3126919..3126921);gbkey=tRNA;product=tRNA-Gln NC_017265.1 RefSeq gene 3126994 3127070 . + . ID=gene2909;Name=YPC_RS14590;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS14590;old_locus_tag=YPC_3250 NC_017265.1 tRNAscan-SE tRNA 3126994 3127070 . + . ID=rna73;Parent=gene2909;anticodon=(pos:3127028..3127030);gbkey=tRNA;product=tRNA-Met NC_017265.1 tRNAscan-SE exon 3126994 3127070 . + . ID=id251;Parent=rna73;anticodon=(pos:3127028..3127030);gbkey=tRNA;product=tRNA-Met NC_017265.1 RefSeq gene 3127076 3127150 . + . ID=gene2910;Name=YPC_RS14595;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS14595;old_locus_tag=YPC_3251 NC_017265.1 tRNAscan-SE tRNA 3127076 3127150 . + . ID=rna74;Parent=gene2910;anticodon=(pos:3127108..3127110);gbkey=tRNA;product=tRNA-Gln NC_017265.1 tRNAscan-SE exon 3127076 3127150 . + . ID=id252;Parent=rna74;anticodon=(pos:3127108..3127110);gbkey=tRNA;product=tRNA-Gln NC_017265.1 RefSeq gene 3127544 3128725 . - . ID=gene2911;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=YPC_RS14600;old_locus_tag=YPC_3252 NC_017265.1 Protein Homology CDS 3127544 3128725 . - 0 ID=cds2832;Parent=gene2911;Dbxref=Genbank:WP_002210347.1;Name=WP_002210347.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_002210347.1;transl_table=11 NC_017265.1 RefSeq gene 3128967 3130391 . + . ID=gene2912;Name=YPC_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14605;old_locus_tag=YPC_3253 NC_017265.1 Protein Homology CDS 3128967 3130391 . + 0 ID=cds2833;Parent=gene2912;Dbxref=Genbank:WP_015683707.1;Name=WP_015683707.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=dimethylallyladenosine tRNA methylthiotransferase;protein_id=WP_015683707.1;transl_table=11 NC_017265.1 RefSeq gene 3130736 3131791 . + . ID=gene2913;Name=YPC_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14610;old_locus_tag=YPC_3254 NC_017265.1 Protein Homology CDS 3130736 3131791 . + 0 ID=cds2834;Parent=gene2913;Dbxref=Genbank:WP_042468841.1;Name=WP_042468841.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_042468841.1;transl_table=11 NC_017265.1 RefSeq gene 3131788 3132261 . + . ID=gene2914;Name=YPC_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14615;old_locus_tag=YPC_3255 NC_017265.1 Protein Homology CDS 3131788 3132261 . + 0 ID=cds2835;Parent=gene2914;Dbxref=Genbank:WP_002210344.1;Name=WP_002210344.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_002210344.1;transl_table=11 NC_017265.1 RefSeq gene 3132379 3133257 . + . ID=gene2915;Name=YPC_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14620;old_locus_tag=YPC_3257 NC_017265.1 Protein Homology CDS 3132379 3133257 . + 0 ID=cds2836;Parent=gene2915;Dbxref=Genbank:WP_002210342.1;Name=WP_002210342.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_002210342.1;transl_table=11 NC_017265.1 RefSeq gene 3133265 3134812 . + . ID=gene2916;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YPC_RS14625;old_locus_tag=YPC_3258 NC_017265.1 Protein Homology CDS 3133265 3134812 . + 0 ID=cds2837;Parent=gene2916;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NC_017265.1 RefSeq gene 3135577 3136494 . + . ID=gene2917;Name=YPC_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14630;old_locus_tag=YPC_3259 NC_017265.1 Protein Homology CDS 3135577 3136494 . + 0 ID=cds2838;Parent=gene2917;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11 NC_017265.1 RefSeq gene 3136668 3137408 . + . ID=gene2918;Name=YPC_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14635;old_locus_tag=YPC_3260 NC_017265.1 Protein Homology CDS 3136668 3137408 . + 0 ID=cds2839;Parent=gene2918;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11 NC_017265.1 RefSeq gene 3137408 3138082 . + . ID=gene2919;Name=YPC_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14640;old_locus_tag=YPC_3261 NC_017265.1 Protein Homology CDS 3137408 3138082 . + 0 ID=cds2840;Parent=gene2919;Dbxref=Genbank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;product=glutamate/aspartate transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NC_017265.1 RefSeq gene 3138082 3138807 . + . ID=gene2920;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YPC_RS14645;old_locus_tag=YPC_3262 NC_017265.1 Protein Homology CDS 3138082 3138807 . + 0 ID=cds2841;Parent=gene2920;Dbxref=Genbank:WP_002210336.1;Name=WP_002210336.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NC_017265.1 RefSeq gene 3138941 3139423 . - . ID=gene2921;Name=YPC_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14650;old_locus_tag=YPC_3263 NC_017265.1 Protein Homology CDS 3138941 3139423 . - 0 ID=cds2842;Parent=gene2921;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11 NC_017265.1 RefSeq gene 3139684 3142266 . + . ID=gene2922;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YPC_RS14655;old_locus_tag=YPC_3265 NC_017265.1 Protein Homology CDS 3139684 3142266 . + 0 ID=cds2843;Parent=gene2922;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NC_017265.1 RefSeq gene 3142281 3142904 . + . ID=gene2923;Name=YPC_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14660;old_locus_tag=YPC_3266 NC_017265.1 Protein Homology CDS 3142281 3142904 . + 0 ID=cds2844;Parent=gene2923;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11 NC_017265.1 RefSeq gene 3142901 3143935 . + . ID=gene2924;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YPC_RS14665;old_locus_tag=YPC_3267 NC_017265.1 Protein Homology CDS 3142901 3143935 . + 0 ID=cds2845;Parent=gene2924;Dbxref=Genbank:WP_002210331.1;Name=WP_002210331.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_002210331.1;transl_table=11 NC_017265.1 RefSeq gene 3143925 3144587 . + . ID=gene2925;Name=YPC_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14670;old_locus_tag=YPC_3268 NC_017265.1 Protein Homology CDS 3143925 3144587 . + 0 ID=cds2846;Parent=gene2925;Dbxref=Genbank:WP_002210330.1;Name=WP_002210330.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NC_017265.1 RefSeq gene 3144811 3145128 . + . ID=gene2926;Name=YPC_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14675;old_locus_tag=YPC_3269 NC_017265.1 Protein Homology CDS 3144811 3145128 . + 0 ID=cds2847;Parent=gene2926;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11 NC_017265.1 RefSeq gene 3145132 3145602 . + . ID=gene2927;Name=YPC_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14680;old_locus_tag=YPC_3270 NC_017265.1 Protein Homology CDS 3145132 3145602 . + 0 ID=cds2848;Parent=gene2927;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11 NC_017265.1 RefSeq gene 3145684 3147579 . + . ID=gene2928;Name=YPC_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14685;old_locus_tag=YPC_3271 NC_017265.1 Protein Homology CDS 3145684 3147579 . + 0 ID=cds2849;Parent=gene2928;Dbxref=Genbank:WP_015683709.1;Name=WP_015683709.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_015683709.1;transl_table=11 NC_017265.1 RefSeq gene 3147764 3148876 . + . ID=gene2929;Name=YPC_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14690;old_locus_tag=YPC_3272 NC_017265.1 Protein Homology CDS 3147764 3148876 . + 0 ID=cds2850;Parent=gene2929;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11 NC_017265.1 RefSeq gene 3148886 3149968 . + . ID=gene2930;Name=YPC_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14695;old_locus_tag=YPC_3273 NC_017265.1 Protein Homology CDS 3148886 3149968 . + 0 ID=cds2851;Parent=gene2930;Dbxref=Genbank:WP_002210324.1;Name=WP_002210324.1;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210324.1;transl_table=11 NC_017265.1 RefSeq gene 3150371 3151573 . + . ID=gene2931;Name=YPC_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14700;old_locus_tag=YPC_3274 NC_017265.1 Protein Homology CDS 3150371 3151573 . + 0 ID=cds2852;Parent=gene2931;Dbxref=Genbank:WP_002210323.1;Name=WP_002210323.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002210323.1;transl_table=11 NC_017265.1 RefSeq gene 3151771 3152034 . + . ID=gene2932;Name=YPC_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14705;old_locus_tag=YPC_3275 NC_017265.1 Protein Homology CDS 3151771 3152034 . + 0 ID=cds2853;Parent=gene2932;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11 NC_017265.1 RefSeq gene 3152246 3152947 . + . ID=gene2933;Name=YPC_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14710;old_locus_tag=YPC_3276 NC_017265.1 Protein Homology CDS 3152246 3152947 . + 0 ID=cds2854;Parent=gene2933;Dbxref=Genbank:WP_002218201.1;Name=WP_002218201.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_002218201.1;transl_table=11 NC_017265.1 RefSeq gene 3153140 3154105 . + . ID=gene2934;Name=YPC_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14715;old_locus_tag=YPC_3277 NC_017265.1 Protein Homology CDS 3153140 3154105 . + 0 ID=cds2855;Parent=gene2934;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NC_017265.1 RefSeq gene 3154286 3154543 . - . ID=gene2935;Name=YPC_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14720;old_locus_tag=YPC_3278 NC_017265.1 Protein Homology CDS 3154286 3154543 . - 0 ID=cds2856;Parent=gene2935;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11 NC_017265.1 RefSeq gene 3154598 3154750 . - . ID=gene2936;Name=YPC_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14725;old_locus_tag=YPC_3279 NC_017265.1 Protein Homology CDS 3154598 3154750 . - 0 ID=cds2857;Parent=gene2936;Dbxref=Genbank:WP_002210318.1;Name=WP_002210318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210318.1;transl_table=11 NC_017265.1 RefSeq gene 3155110 3155493 . + . ID=gene2937;Name=YPC_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14730;old_locus_tag=YPC_3280 NC_017265.1 Protein Homology CDS 3155110 3155493 . + 0 ID=cds2858;Parent=gene2937;Dbxref=Genbank:WP_002210317.1;Name=WP_002210317.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_002210317.1;transl_table=11 NC_017265.1 cmsearch region 3155870 3156298 . - . ID=id253;Note=cspA;gbkey=misc_feature NC_017265.1 RefSeq gene 3155916 3156125 . - . ID=gene2938;Name=YPC_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14735 NC_017265.1 Protein Homology CDS 3155916 3156125 . - 0 ID=cds2859;Parent=gene2938;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11 NC_017265.1 RefSeq gene 3156404 3156883 . + . ID=gene2939;Name=YPC_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14740;old_locus_tag=YPC_3283 NC_017265.1 Protein Homology CDS 3156404 3156883 . + 0 ID=cds2860;Parent=gene2939;Dbxref=Genbank:WP_012229509.1;Name=WP_012229509.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012229509.1;transl_table=11 NC_017265.1 RefSeq gene 3157193 3157783 . - . ID=gene2940;Name=YPC_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14745;old_locus_tag=YPC_3284 NC_017265.1 Protein Homology CDS 3157193 3157783 . - 0 ID=cds2861;Parent=gene2940;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NC_017265.1 RefSeq gene 3158233 3159198 . + . ID=gene2941;Name=YPC_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14750;old_locus_tag=YPC_3285 NC_017265.1 Protein Homology CDS 3158233 3159198 . + 0 ID=cds2862;Parent=gene2941;Dbxref=Genbank:WP_002210312.1;Name=WP_002210312.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210312.1;transl_table=11 NC_017265.1 RefSeq gene 3159380 3159562 . + . ID=gene2942;Name=YPC_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14755;old_locus_tag=YPC_3286 NC_017265.1 Protein Homology CDS 3159380 3159562 . + 0 ID=cds2863;Parent=gene2942;Dbxref=Genbank:WP_002210311.1;Name=WP_002210311.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210311.1;transl_table=11 NC_017265.1 RefSeq gene 3159580 3159774 . - . ID=gene2943;Name=YPC_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14760;old_locus_tag=YPC_3287 NC_017265.1 Protein Homology CDS 3159580 3159774 . - 0 ID=cds2864;Parent=gene2943;Dbxref=Genbank:WP_002210310.1;Name=WP_002210310.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_002210310.1;transl_table=11 NC_017265.1 RefSeq gene 3160217 3160504 . + . ID=gene2944;Name=YPC_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14765;old_locus_tag=YPC_3288 NC_017265.1 Protein Homology CDS 3160217 3160504 . + 0 ID=cds2865;Parent=gene2944;Dbxref=Genbank:WP_002210309.1;Name=WP_002210309.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002210309.1;transl_table=11 NC_017265.1 RefSeq gene 3160520 3162310 . - . ID=gene2945;Name=YPC_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14770;old_locus_tag=YPC_3289 NC_017265.1 Protein Homology CDS 3160520 3162310 . - 0 ID=cds2866;Parent=gene2945;Dbxref=Genbank:WP_015683710.1;Name=WP_015683710.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_015683710.1;transl_table=11 NC_017265.1 RefSeq gene 3162518 3162721 . - . ID=gene2946;Name=YPC_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14775 NC_017265.1 Protein Homology CDS 3162518 3162721 . - 0 ID=cds2867;Parent=gene2946;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11 NC_017265.1 RefSeq gene 3162881 3163696 . - . ID=gene2947;Name=YPC_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14780;old_locus_tag=YPC_3290 NC_017265.1 Protein Homology CDS 3162881 3163696 . - 0 ID=cds2868;Parent=gene2947;Dbxref=Genbank:WP_002210306.1;Name=WP_002210306.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_002210306.1;transl_table=11 NC_017265.1 RefSeq gene 3163706 3164626 . - . ID=gene2948;Name=YPC_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14785;old_locus_tag=YPC_3291 NC_017265.1 Protein Homology CDS 3163706 3164626 . - 0 ID=cds2869;Parent=gene2948;Dbxref=Genbank:WP_002227877.1;Name=WP_002227877.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_002227877.1;transl_table=11 NC_017265.1 RefSeq gene 3164779 3166656 . - . ID=gene2949;Name=YPC_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14790;old_locus_tag=YPC_3292 NC_017265.1 Protein Homology CDS 3164779 3166656 . - 0 ID=cds2870;Parent=gene2949;Dbxref=Genbank:WP_002222597.1;Name=WP_002222597.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_002222597.1;transl_table=11 NC_017265.1 RefSeq gene 3166782 3167915 . - . ID=gene2950;Name=YPC_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14795;old_locus_tag=YPC_3293 NC_017265.1 Protein Homology CDS 3166782 3167915 . - 0 ID=cds2871;Parent=gene2950;Dbxref=Genbank:WP_002210303.1;Name=WP_002210303.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_002210303.1;transl_table=11 NC_017265.1 RefSeq gene 3167939 3168967 . - . ID=gene2951;Name=YPC_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14800;old_locus_tag=YPC_3294 NC_017265.1 Protein Homology CDS 3167939 3168967 . - 0 ID=cds2872;Parent=gene2951;Dbxref=Genbank:WP_002210302.1;Name=WP_002210302.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NC_017265.1 RefSeq gene 3168979 3170526 . - . ID=gene2952;Name=YPC_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14805;old_locus_tag=YPC_3295 NC_017265.1 Protein Homology CDS 3168979 3170526 . - 0 ID=cds2873;Parent=gene2952;Dbxref=Genbank:WP_002223323.1;Name=WP_002223323.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_002223323.1;transl_table=11 NC_017265.1 RefSeq gene 3170575 3171504 . - . ID=gene2953;Name=YPC_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14810;old_locus_tag=YPC_3296 NC_017265.1 Protein Homology CDS 3170575 3171504 . - 0 ID=cds2874;Parent=gene2953;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11 NC_017265.1 RefSeq gene 3171630 3172615 . - . ID=gene2954;Name=YPC_RS14815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS14815;pseudo=true NC_017265.1 Protein Homology CDS 3171630 3172615 . - 0 ID=cds2875;Parent=gene2954;exception=annotated by transcript or proteomic data;gbkey=CDS;product=inositol 2-dehydrogenase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3172909 3174834 . - . ID=gene2955;Name=YPC_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14820;old_locus_tag=YPC_3299 NC_017265.1 Protein Homology CDS 3172909 3174834 . - 0 ID=cds2876;Parent=gene2955;Dbxref=Genbank:WP_042468842.1;Name=WP_042468842.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_042468842.1;transl_table=11 NC_017265.1 RefSeq gene 3174869 3176395 . - . ID=gene2956;Name=YPC_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14825;old_locus_tag=YPC_3300 NC_017265.1 Protein Homology CDS 3174869 3176395 . - 0 ID=cds2877;Parent=gene2956;Dbxref=Genbank:WP_002210297.1;Name=WP_002210297.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002210297.1;transl_table=11 NC_017265.1 RefSeq gene 3176749 3177603 . + . ID=gene2957;Name=YPC_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14830;old_locus_tag=YPC_3301 NC_017265.1 Protein Homology CDS 3176749 3177603 . + 0 ID=cds2878;Parent=gene2957;Dbxref=Genbank:WP_002210296.1;Name=WP_002210296.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_002210296.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3177607 3177876 . + . ID=id254;gbkey=repeat_region NC_017265.1 RefSeq gene 3178237 3178785 . + . ID=gene2958;Name=YPC_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14835;old_locus_tag=YPC_3303 NC_017265.1 Protein Homology CDS 3178237 3178785 . + 0 ID=cds2879;Parent=gene2958;Dbxref=Genbank:WP_002223316.1;Name=WP_002223316.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223316.1;transl_table=11 NC_017265.1 RefSeq gene 3179192 3185170 . + . ID=gene2959;Name=YPC_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14840;old_locus_tag=YPC_3304 NC_017265.1 Protein Homology CDS 3179192 3185170 . + 0 ID=cds2880;Parent=gene2959;Dbxref=Genbank:WP_002210294.1;Name=WP_002210294.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210294.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3185173 3185891 . + . ID=id255;gbkey=repeat_region NC_017265.1 RefSeq gene 3185285 3185743 . - . ID=gene2960;Name=YPC_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14845;old_locus_tag=YPC_3305 NC_017265.1 Protein Homology CDS 3185285 3185743 . - 0 ID=cds2881;Parent=gene2960;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3185733 3185903 . - . ID=gene2961;Name=YPC_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14850 NC_017265.1 Protein Homology CDS 3185733 3185903 . - 0 ID=cds2882;Parent=gene2961;Dbxref=Genbank:WP_025470849.1;Name=WP_025470849.1;gbkey=CDS;product=transposase;protein_id=WP_025470849.1;transl_table=11 NC_017265.1 RefSeq gene 3185938 3188301 . + . ID=gene2962;Name=YPC_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14855;old_locus_tag=YPC_3307 NC_017265.1 Protein Homology CDS 3185938 3188301 . + 0 ID=cds2883;Parent=gene2962;Dbxref=Genbank:WP_002223314.1;Name=WP_002223314.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_002223314.1;transl_table=11 NC_017265.1 RefSeq gene 3188514 3188759 . - . ID=gene2963;Name=YPC_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14860;old_locus_tag=YPC_3309 NC_017265.1 Protein Homology CDS 3188514 3188759 . - 0 ID=cds2884;Parent=gene2963;Dbxref=Genbank:WP_002209745.1;Name=WP_002209745.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002209745.1;transl_table=11 NC_017265.1 RefSeq gene 3189432 3190013 . + . ID=gene2964;Name=YPC_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14865;old_locus_tag=YPC_3310 NC_017265.1 Protein Homology CDS 3189432 3190013 . + 0 ID=cds2885;Parent=gene2964;Dbxref=Genbank:WP_002216002.1;Name=WP_002216002.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216002.1;transl_table=11 NC_017265.1 RefSeq gene 3190086 3190289 . + . ID=gene2965;Name=YPC_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14870;old_locus_tag=YPC_3311 NC_017265.1 Protein Homology CDS 3190086 3190289 . + 0 ID=cds2886;Parent=gene2965;Dbxref=Genbank:WP_002216003.1;Name=WP_002216003.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216003.1;transl_table=11 NC_017265.1 RefSeq gene 3190282 3190683 . + . ID=gene2966;Name=YPC_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14875;old_locus_tag=YPC_3312 NC_017265.1 Protein Homology CDS 3190282 3190683 . + 0 ID=cds2887;Parent=gene2966;Dbxref=Genbank:WP_002209746.1;Name=WP_002209746.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209746.1;transl_table=11 NC_017265.1 RefSeq gene 3190917 3191318 . + . ID=gene2967;Name=YPC_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14880;old_locus_tag=YPC_3313 NC_017265.1 Protein Homology CDS 3190917 3191318 . + 0 ID=cds2888;Parent=gene2967;Dbxref=Genbank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209748.1;transl_table=11 NC_017265.1 RefSeq gene 3191330 3191902 . - . ID=gene2968;Name=YPC_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14885;old_locus_tag=YPC_3314 NC_017265.1 Protein Homology CDS 3191330 3191902 . - 0 ID=cds2889;Parent=gene2968;Dbxref=Genbank:WP_002209749.1;Name=WP_002209749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209749.1;transl_table=11 NC_017265.1 RefSeq gene 3191926 3192177 . - . ID=gene2969;Name=YPC_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14890;old_locus_tag=YPC_3315 NC_017265.1 Protein Homology CDS 3191926 3192177 . - 0 ID=cds2890;Parent=gene2969;Dbxref=Genbank:WP_002227852.1;Name=WP_002227852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227852.1;transl_table=11 NC_017265.1 RefSeq gene 3192216 3192455 . - . ID=gene2970;Name=YPC_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14895;old_locus_tag=YPC_3316 NC_017265.1 Protein Homology CDS 3192216 3192455 . - 0 ID=cds2891;Parent=gene2970;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NC_017265.1 RefSeq gene 3193264 3195180 . + . ID=gene2971;Name=YPC_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14900;old_locus_tag=YPC_3317 NC_017265.1 Protein Homology CDS 3193264 3195180 . + 0 ID=cds2892;Parent=gene2971;Dbxref=Genbank:WP_002209752.1;Name=WP_002209752.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209752.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3195204 3195377 . + . ID=id256;gbkey=repeat_region NC_017265.1 RefSeq gene 3195715 3196296 . + . ID=gene2972;Name=YPC_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14905;old_locus_tag=YPC_3319 NC_017265.1 Protein Homology CDS 3195715 3196296 . + 0 ID=cds2893;Parent=gene2972;Dbxref=Genbank:WP_002209753.1;Name=WP_002209753.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209753.1;transl_table=11 NC_017265.1 RefSeq gene 3196311 3196619 . - . ID=gene2973;Name=YPC_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14910;old_locus_tag=YPC_3320 NC_017265.1 Protein Homology CDS 3196311 3196619 . - 0 ID=cds2894;Parent=gene2973;Dbxref=Genbank:WP_002209754.1;Name=WP_002209754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209754.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3196660 3197978 . + . ID=id257;gbkey=repeat_region NC_017265.1 RefSeq gene 3196698 3197906 . - . ID=gene2974;Name=YPC_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14915;old_locus_tag=YPC_3321 NC_017265.1 Protein Homology CDS 3196698 3197906 . - 0 ID=cds2895;Parent=gene2974;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017265.1 RefSeq gene 3198358 3200565 . + . ID=gene2975;Name=YPC_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14920 NC_017265.1 Protein Homology CDS 3198358 3200565 . + 0 ID=cds2896;Parent=gene2975;Dbxref=Genbank:WP_002209756.1;Name=WP_002209756.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209756.1;transl_table=11 NC_017265.1 RefSeq gene 3200558 3201088 . + . ID=gene2976;Name=YPC_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14925 NC_017265.1 Protein Homology CDS 3200558 3201088 . + 0 ID=cds2897;Parent=gene2976;Dbxref=Genbank:WP_002209757.1;Name=WP_002209757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209757.1;transl_table=11 NC_017265.1 RefSeq gene 3201247 3203628 . + . ID=gene2977;Name=YPC_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14930;old_locus_tag=YPC_3325 NC_017265.1 Protein Homology CDS 3201247 3203628 . + 0 ID=cds2898;Parent=gene2977;Dbxref=Genbank:WP_002209758.1;Name=WP_002209758.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_002209758.1;transl_table=11 NC_017265.1 RefSeq gene 3203707 3205335 . - . ID=gene2978;Name=YPC_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14935;old_locus_tag=YPC_3326 NC_017265.1 Protein Homology CDS 3203707 3205335 . - 0 ID=cds2899;Parent=gene2978;Dbxref=Genbank:WP_002209759.1;Name=WP_002209759.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209759.1;transl_table=11 NC_017265.1 RefSeq gene 3205352 3205495 . - . ID=gene2979;Name=YPC_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14940 NC_017265.1 Protein Homology CDS 3205352 3205495 . - 0 ID=cds2900;Parent=gene2979;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NC_017265.1 RefSeq gene 3205492 3205617 . - . ID=gene2980;Name=YPC_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14945;old_locus_tag=YPC_3327 NC_017265.1 Protein Homology CDS 3205492 3205617 . - 0 ID=cds2901;Parent=gene2980;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NC_017265.1 RefSeq gene 3205808 3206659 . + . ID=gene2981;Name=YPC_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14950;old_locus_tag=YPC_3328 NC_017265.1 Protein Homology CDS 3205808 3206659 . + 0 ID=cds2902;Parent=gene2981;Dbxref=Genbank:WP_015683712.1;Name=WP_015683712.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_015683712.1;transl_table=11 NC_017265.1 RefSeq gene 3206685 3207674 . + . ID=gene2982;Name=YPC_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14955;old_locus_tag=YPC_3329 NC_017265.1 Protein Homology CDS 3206685 3207674 . + 0 ID=cds2903;Parent=gene2982;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NC_017265.1 RefSeq gene 3207729 3208622 . - . ID=gene2983;Name=YPC_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14960;old_locus_tag=YPC_3330 NC_017265.1 Protein Homology CDS 3207729 3208622 . - 0 ID=cds2904;Parent=gene2983;Dbxref=Genbank:WP_002209764.1;Name=WP_002209764.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3208627 3210584 . + . ID=id258;gbkey=repeat_region NC_017265.1 RefSeq gene 3208716 3209738 . + . ID=gene2984;Name=YPC_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14965;old_locus_tag=YPC_3331 NC_017265.1 Protein Homology CDS 3208716 3209738 . + 0 ID=cds2905;Parent=gene2984;Dbxref=Genbank:WP_015683713.1;Name=WP_015683713.1;gbkey=CDS;product=transposase;protein_id=WP_015683713.1;transl_table=11 NC_017265.1 RefSeq gene 3209738 3210517 . + . ID=gene2985;Name=YPC_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14970;old_locus_tag=YPC_3332 NC_017265.1 Protein Homology CDS 3209738 3210517 . + 0 ID=cds2906;Parent=gene2985;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 3210885 3211190 . - . ID=gene2986;Name=YPC_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14975;old_locus_tag=YPC_3333 NC_017265.1 Protein Homology CDS 3210885 3211190 . - 0 ID=cds2907;Parent=gene2986;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11 NC_017265.1 RefSeq gene 3211287 3211688 . - . ID=gene2987;Name=YPC_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14980;old_locus_tag=YPC_3334 NC_017265.1 Protein Homology CDS 3211287 3211688 . - 0 ID=cds2908;Parent=gene2987;Dbxref=Genbank:WP_002209765.1;Name=WP_002209765.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209765.1;transl_table=11 NC_017265.1 RefSeq gene 3211670 3212989 . - . ID=gene2988;Name=YPC_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14985;old_locus_tag=YPC_3335 NC_017265.1 Protein Homology CDS 3211670 3212989 . - 0 ID=cds2909;Parent=gene2988;Dbxref=Genbank:WP_002209766.1;Name=WP_002209766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209766.1;transl_table=11 NC_017265.1 RefSeq gene 3212982 3214745 . - . ID=gene2989;Name=YPC_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14990;old_locus_tag=YPC_3336 NC_017265.1 Protein Homology CDS 3212982 3214745 . - 0 ID=cds2910;Parent=gene2989;Dbxref=Genbank:WP_002209767.1;Name=WP_002209767.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002209767.1;transl_table=11 NC_017265.1 RefSeq gene 3214742 3215374 . - . ID=gene2990;Name=YPC_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS14995;old_locus_tag=YPC_3337 NC_017265.1 Protein Homology CDS 3214742 3215374 . - 0 ID=cds2911;Parent=gene2990;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11 NC_017265.1 RefSeq gene 3215384 3216313 . - . ID=gene2991;Name=YPC_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15000;old_locus_tag=YPC_3338 NC_017265.1 Protein Homology CDS 3215384 3216313 . - 0 ID=cds2912;Parent=gene2991;Dbxref=Genbank:WP_002209769.1;Name=WP_002209769.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_002209769.1;transl_table=11 NC_017265.1 RefSeq gene 3216306 3216908 . - . ID=gene2992;Name=YPC_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15005;old_locus_tag=YPC_3339 NC_017265.1 Protein Homology CDS 3216306 3216908 . - 0 ID=cds2913;Parent=gene2992;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11 NC_017265.1 RefSeq gene 3217135 3217311 . - . ID=gene2993;Name=YPC_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15010 NC_017265.1 Protein Homology CDS 3217135 3217311 . - 0 ID=cds2914;Parent=gene2993;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11 NC_017265.1 RefSeq gene 3217308 3217514 . - . ID=gene2994;Name=YPC_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15015 NC_017265.1 Protein Homology CDS 3217308 3217514 . - 0 ID=cds2915;Parent=gene2994;Dbxref=Genbank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NC_017265.1 RefSeq gene 3218087 3218425 . + . ID=gene2995;Name=YPC_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15020;old_locus_tag=YPC_3342 NC_017265.1 Protein Homology CDS 3218087 3218425 . + 0 ID=cds2916;Parent=gene2995;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NC_017265.1 RefSeq gene 3218410 3218523 . + . ID=gene2996;Name=YPC_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15025;old_locus_tag=YPC_3343 NC_017265.1 Protein Homology CDS 3218410 3218523 . + 0 ID=cds2917;Parent=gene2996;Dbxref=Genbank:WP_002228357.1;Name=WP_002228357.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228357.1;transl_table=11 NC_017265.1 RefSeq gene 3218561 3219058 . + . ID=gene2997;Name=YPC_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15030;old_locus_tag=YPC_3344 NC_017265.1 Protein Homology CDS 3218561 3219058 . + 0 ID=cds2918;Parent=gene2997;Dbxref=Genbank:WP_002228356.1;Name=WP_002228356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228356.1;transl_table=11 NC_017265.1 RefSeq gene 3219172 3219372 . + . ID=gene2998;Name=YPC_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15035;old_locus_tag=YPC_3345 NC_017265.1 Protein Homology CDS 3219172 3219372 . + 0 ID=cds2919;Parent=gene2998;Dbxref=Genbank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NC_017265.1 RefSeq gene 3219631 3219813 . + . ID=gene2999;Name=YPC_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15040;old_locus_tag=YPC_3346 NC_017265.1 Protein Homology CDS 3219631 3219813 . + 0 ID=cds2920;Parent=gene2999;Dbxref=Genbank:WP_002215270.1;Name=WP_002215270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215270.1;transl_table=11 NC_017265.1 RefSeq gene 3219877 3219953 . - . ID=gene3000;Name=YPC_RS15045;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS15045;old_locus_tag=YPC_3347 NC_017265.1 tRNAscan-SE tRNA 3219877 3219953 . - . ID=rna75;Parent=gene3000;anticodon=(pos:complement(3219917..3219919));gbkey=tRNA;product=tRNA-Arg NC_017265.1 tRNAscan-SE exon 3219877 3219953 . - . ID=id259;Parent=rna75;anticodon=(pos:complement(3219917..3219919));gbkey=tRNA;product=tRNA-Arg NC_017265.1 RefSeq gene 3220168 3221034 . + . ID=gene3001;Name=YPC_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15050;old_locus_tag=YPC_3348 NC_017265.1 Protein Homology CDS 3220168 3221034 . + 0 ID=cds2921;Parent=gene3001;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11 NC_017265.1 RefSeq gene 3221049 3221261 . + . ID=gene3002;Name=YPC_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15055;old_locus_tag=YPC_3349 NC_017265.1 Protein Homology CDS 3221049 3221261 . + 0 ID=cds2922;Parent=gene3002;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3221297 3222017 . + . ID=id260;gbkey=repeat_region NC_017265.1 RefSeq gene 3221408 3221866 . - . ID=gene3003;Name=YPC_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15060;old_locus_tag=YPC_3350 NC_017265.1 Protein Homology CDS 3221408 3221866 . - 0 ID=cds2923;Parent=gene3003;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3221856 3222086 . - . ID=gene3004;Name=YPC_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15065 NC_017265.1 Protein Homology CDS 3221856 3222086 . - 0 ID=cds2924;Parent=gene3004;Dbxref=Genbank:WP_002430127.1;Name=WP_002430127.1;gbkey=CDS;product=invasin;protein_id=WP_002430127.1;transl_table=11 NC_017265.1 RefSeq gene 3222213 3223598 . - . ID=gene3005;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YPC_RS15070;old_locus_tag=YPC_3352 NC_017265.1 Protein Homology CDS 3222213 3223598 . - 0 ID=cds2925;Parent=gene3005;Dbxref=Genbank:WP_015683714.1;Name=WP_015683714.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=WP_015683714.1;transl_table=11 NC_017265.1 RefSeq gene 3223809 3224303 . + . ID=gene3006;Name=YPC_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15075;old_locus_tag=YPC_3353 NC_017265.1 Protein Homology CDS 3223809 3224303 . + 0 ID=cds2926;Parent=gene3006;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11 NC_017265.1 RefSeq gene 3224314 3225036 . + . ID=gene3007;Name=YPC_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15080;old_locus_tag=YPC_3354 NC_017265.1 Protein Homology CDS 3224314 3225036 . + 0 ID=cds2927;Parent=gene3007;Dbxref=Genbank:WP_002208568.1;Name=WP_002208568.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_002208568.1;transl_table=11 NC_017265.1 RefSeq gene 3225332 3225856 . + . ID=gene3008;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YPC_RS15085;old_locus_tag=YPC_3355 NC_017265.1 Protein Homology CDS 3225332 3225856 . + 0 ID=cds2928;Parent=gene3008;Dbxref=Genbank:WP_002208569.1;Name=WP_002208569.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NC_017265.1 RefSeq gene 3225853 3226917 . + . ID=gene3009;Name=YPC_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15090;old_locus_tag=YPC_3356 NC_017265.1 Protein Homology CDS 3225853 3226917 . + 0 ID=cds2929;Parent=gene3009;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11 NC_017265.1 RefSeq gene 3226961 3229390 . - . ID=gene3010;Name=YPC_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15095;old_locus_tag=YPC_3357 NC_017265.1 Protein Homology CDS 3226961 3229390 . - 0 ID=cds2930;Parent=gene3010;Dbxref=Genbank:WP_002208571.1;Name=WP_002208571.1;gbkey=CDS;product=permease;protein_id=WP_002208571.1;transl_table=11 NC_017265.1 RefSeq gene 3229387 3230073 . - . ID=gene3011;Name=YPC_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15100;old_locus_tag=YPC_3358 NC_017265.1 Protein Homology CDS 3229387 3230073 . - 0 ID=cds2931;Parent=gene3011;Dbxref=Genbank:WP_002208572.1;Name=WP_002208572.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002208572.1;transl_table=11 NC_017265.1 RefSeq gene 3230044 3230679 . + . ID=gene3012;Name=YPC_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15105;old_locus_tag=YPC_3359 NC_017265.1 Protein Homology CDS 3230044 3230679 . + 0 ID=cds2932;Parent=gene3012;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NC_017265.1 RefSeq gene 3231066 3231842 . + . ID=gene3013;Name=YPC_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15110;old_locus_tag=YPC_3360 NC_017265.1 Protein Homology CDS 3231066 3231842 . + 0 ID=cds2933;Parent=gene3013;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NC_017265.1 RefSeq gene 3231919 3232788 . + . ID=gene3014;Name=YPC_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15115;old_locus_tag=YPC_3361 NC_017265.1 Protein Homology CDS 3231919 3232788 . + 0 ID=cds2934;Parent=gene3014;Dbxref=Genbank:WP_002208575.1;Name=WP_002208575.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002208575.1;transl_table=11 NC_017265.1 RefSeq gene 3232983 3233897 . + . ID=gene3015;Name=YPC_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15120;old_locus_tag=YPC_3363 NC_017265.1 Protein Homology CDS 3232983 3233897 . + 0 ID=cds2935;Parent=gene3015;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11 NC_017265.1 RefSeq gene 3233900 3234349 . + . ID=gene3016;Name=YPC_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15125;old_locus_tag=YPC_3364 NC_017265.1 Protein Homology CDS 3233900 3234349 . + 0 ID=cds2936;Parent=gene3016;Dbxref=Genbank:WP_002208577.1;Name=WP_002208577.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208577.1;transl_table=11 NC_017265.1 RefSeq gene 3234458 3234877 . - . ID=gene3017;Name=YPC_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15130;old_locus_tag=YPC_3365 NC_017265.1 Protein Homology CDS 3234458 3234877 . - 0 ID=cds2937;Parent=gene3017;Dbxref=Genbank:WP_002208578.1;Name=WP_002208578.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208578.1;transl_table=11 NC_017265.1 RefSeq gene 3235084 3237969 . + . ID=gene3018;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YPC_RS15135;old_locus_tag=YPC_3366 NC_017265.1 Protein Homology CDS 3235084 3237969 . + 0 ID=cds2938;Parent=gene3018;Dbxref=Genbank:WP_002223301.1;Name=WP_002223301.1;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=WP_002223301.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3238040 3238450 . + . ID=id261;gbkey=repeat_region NC_017265.1 RefSeq gene 3238490 3239299 . + . ID=gene3019;Name=YPC_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15140 NC_017265.1 Protein Homology CDS 3238490 3239299 . + 0 ID=cds2939;Parent=gene3019;Dbxref=Genbank:WP_002208580.1;Name=WP_002208580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208580.1;transl_table=11 NC_017265.1 RefSeq gene 3239563 3240042 . + . ID=gene3020;Name=YPC_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15145;old_locus_tag=YPC_3369 NC_017265.1 Protein Homology CDS 3239563 3240042 . + 0 ID=cds2940;Parent=gene3020;Dbxref=Genbank:WP_002208581.1;Name=WP_002208581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208581.1;transl_table=11 NC_017265.1 RefSeq gene 3240108 3240365 . + . ID=gene3021;Name=YPC_RS15150;gbkey=Gene;gene_biotype=other;locus_tag=YPC_RS15150 NC_017265.1 RefSeq repeat_region 3240123 3240292 . + . ID=id262;gbkey=repeat_region NC_017265.1 RefSeq gene 3240379 3240618 . + . ID=gene3022;Name=YPC_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15155;old_locus_tag=YPC_3370 NC_017265.1 Protein Homology CDS 3240379 3240618 . + 0 ID=cds2941;Parent=gene3022;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NC_017265.1 RefSeq gene 3240722 3241345 . - . ID=gene3023;Name=YPC_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15160 NC_017265.1 Protein Homology CDS 3240722 3241345 . - 0 ID=cds2942;Parent=gene3023;Dbxref=Genbank:WP_002228353.1;Name=WP_002228353.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002228353.1;transl_table=11 NC_017265.1 RefSeq gene 3241339 3242129 . - . ID=gene3024;Name=YPC_RS15165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS15165;pseudo=true NC_017265.1 Protein Homology CDS 3241339 3242129 . - 0 ID=cds2943;Parent=gene3024;exception=annotated by transcript or proteomic data;gbkey=CDS;product=metallophosphatase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3242119 3242376 . - . ID=gene3025;Name=YPC_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15170 NC_017265.1 GeneMarkS+ CDS 3242119 3242376 . - 0 ID=cds2944;Parent=gene3025;Dbxref=Genbank:WP_002215363.1;Name=WP_002215363.1;gbkey=CDS;product=protein ushA;protein_id=WP_002215363.1;transl_table=11 NC_017265.1 RefSeq gene 3242658 3243872 . + . ID=gene3026;Name=YPC_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15175;old_locus_tag=YPC_3375 NC_017265.1 Protein Homology CDS 3242658 3243872 . + 0 ID=cds2945;Parent=gene3026;Dbxref=Genbank:WP_002208584.1;Name=WP_002208584.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_002208584.1;transl_table=11 NC_017265.1 RefSeq gene 3244107 3245798 . + . ID=gene3027;Name=YPC_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15180;old_locus_tag=YPC_3376 NC_017265.1 Protein Homology CDS 3244107 3245798 . + 0 ID=cds2946;Parent=gene3027;Dbxref=Genbank:WP_015683715.1;Name=WP_015683715.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_015683715.1;transl_table=11 NC_017265.1 RefSeq gene 3245895 3247199 . - . ID=gene3028;Name=YPC_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15185;old_locus_tag=YPC_3377 NC_017265.1 Protein Homology CDS 3245895 3247199 . - 0 ID=cds2947;Parent=gene3028;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NC_017265.1 RefSeq gene 3247403 3248554 . - . ID=gene3029;Name=YPC_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15190;old_locus_tag=YPC_3378 NC_017265.1 Protein Homology CDS 3247403 3248554 . - 0 ID=cds2948;Parent=gene3029;Dbxref=Genbank:WP_002223299.1;Name=WP_002223299.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_002223299.1;transl_table=11 NC_017265.1 RefSeq gene 3248602 3249975 . - . ID=gene3030;Name=YPC_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15195;old_locus_tag=YPC_3379 NC_017265.1 Protein Homology CDS 3248602 3249975 . - 0 ID=cds2949;Parent=gene3030;Dbxref=Genbank:WP_002208588.1;Name=WP_002208588.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002208588.1;transl_table=11 NC_017265.1 RefSeq gene 3249980 3250723 . - . ID=gene3031;Name=YPC_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15200;old_locus_tag=YPC_3380 NC_017265.1 Protein Homology CDS 3249980 3250723 . - 0 ID=cds2950;Parent=gene3031;Dbxref=Genbank:WP_002208589.1;Name=WP_002208589.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002208589.1;transl_table=11 NC_017265.1 RefSeq gene 3250726 3252132 . - . ID=gene3032;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=YPC_RS15205;old_locus_tag=YPC_3381 NC_017265.1 Protein Homology CDS 3250726 3252132 . - 0 ID=cds2951;Parent=gene3032;Dbxref=Genbank:WP_015683716.1;Name=WP_015683716.1;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;protein_id=WP_015683716.1;transl_table=11 NC_017265.1 RefSeq gene 3252326 3253291 . - . ID=gene3033;Name=YPC_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15210;old_locus_tag=YPC_3382 NC_017265.1 Protein Homology CDS 3252326 3253291 . - 0 ID=cds2952;Parent=gene3033;Dbxref=Genbank:WP_002223297.1;Name=WP_002223297.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;product=GDP-fucose synthetase;protein_id=WP_002223297.1;transl_table=11 NC_017265.1 RefSeq gene 3253297 3254419 . - . ID=gene3034;Name=YPC_RS15215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS15215;pseudo=true NC_017265.1 Protein Homology CDS 3253297 3254419 . - 0 ID=cds2953;Parent=gene3034;Note=catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3254435 3255448 . - . ID=gene3035;Name=YPC_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15220;old_locus_tag=YPC_3385 NC_017265.1 Protein Homology CDS 3254435 3255448 . - 0 ID=cds2954;Parent=gene3035;Dbxref=Genbank:WP_002208591.1;Name=WP_002208591.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208591.1;transl_table=11 NC_017265.1 RefSeq gene 3255697 3256593 . - . ID=gene3036;Name=YPC_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15225;old_locus_tag=YPC_3386 NC_017265.1 Protein Homology CDS 3255697 3256593 . - 0 ID=cds2955;Parent=gene3036;Dbxref=Genbank:WP_002354669.1;Name=WP_002354669.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002354669.1;transl_table=11 NC_017265.1 RefSeq gene 3256915 3258057 . - . ID=gene3037;Name=YPC_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15230;old_locus_tag=YPC_3387 NC_017265.1 Protein Homology CDS 3256915 3258057 . - 0 ID=cds2956;Parent=gene3037;Dbxref=Genbank:WP_002208592.1;Name=WP_002208592.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208592.1;transl_table=11 NC_017265.1 RefSeq gene 3258437 3259150 . - . ID=gene3038;Name=YPC_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15235;old_locus_tag=YPC_3388 NC_017265.1 Protein Homology CDS 3258437 3259150 . - 0 ID=cds2957;Parent=gene3038;Dbxref=Genbank:WP_002215988.1;Name=WP_002215988.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002215988.1;transl_table=11 NC_017265.1 RefSeq gene 3259161 3260504 . - . ID=gene3039;Name=YPC_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15240;old_locus_tag=YPC_3389 NC_017265.1 Protein Homology CDS 3259161 3260504 . - 0 ID=cds2958;Parent=gene3039;Dbxref=Genbank:WP_002208593.1;Name=WP_002208593.1;gbkey=CDS;product=O-unit flippase Wzx;protein_id=WP_002208593.1;transl_table=11 NC_017265.1 RefSeq gene 3260578 3261861 . - . ID=gene3040;Name=YPC_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15245;old_locus_tag=YPC_3390 NC_017265.1 Protein Homology CDS 3260578 3261861 . - 0 ID=cds2959;Parent=gene3040;Dbxref=Genbank:WP_002208594.1;Name=WP_002208594.1;gbkey=CDS;product=O-antigen synthesis protein WbyH;protein_id=WP_002208594.1;transl_table=11 NC_017265.1 RefSeq gene 3261862 3262719 . - . ID=gene3041;Name=YPC_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15250;old_locus_tag=YPC_3391 NC_017265.1 Protein Homology CDS 3261862 3262719 . - 0 ID=cds2960;Parent=gene3041;Dbxref=Genbank:WP_002208595.1;Name=WP_002208595.1;gbkey=CDS;product=paratose synthase;protein_id=WP_002208595.1;transl_table=11 NC_017265.1 RefSeq gene 3262756 3264069 . - . ID=gene3042;Name=YPC_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15255;old_locus_tag=YPC_3392 NC_017265.1 Protein Homology CDS 3262756 3264069 . - 0 ID=cds2961;Parent=gene3042;Dbxref=Genbank:WP_002208596.1;Name=WP_002208596.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208596.1;transl_table=11 NC_017265.1 RefSeq gene 3264087 3264986 . - . ID=gene3043;Name=YPC_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15260;old_locus_tag=YPC_3393 NC_017265.1 Protein Homology CDS 3264087 3264986 . - 0 ID=cds2962;Parent=gene3043;Dbxref=Genbank:WP_002354671.1;Name=WP_002354671.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11 NC_017265.1 RefSeq gene 3265165 3265938 . - . ID=gene3044;Name=YPC_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15265;old_locus_tag=YPC_3394 NC_017265.1 Protein Homology CDS 3265165 3265938 . - 0 ID=cds2963;Parent=gene3044;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NC_017265.1 RefSeq gene 3265976 3266964 . - . ID=gene3045;Name=YPC_RS15270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS15270;pseudo=true NC_017265.1 Protein Homology CDS 3265976 3266964 . - 0 ID=cds2964;Parent=gene3045;exception=annotated by transcript or proteomic data;gbkey=CDS;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3267562 3268524 . - . ID=gene3046;Name=YPC_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15275;old_locus_tag=YPC_3397 NC_017265.1 Protein Homology CDS 3267562 3268524 . - 0 ID=cds2965;Parent=gene3046;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NC_017265.1 RefSeq gene 3268614 3269258 . - . ID=gene3047;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YPC_RS15280;old_locus_tag=YPC_3398 NC_017265.1 Protein Homology CDS 3268614 3269258 . - 0 ID=cds2966;Parent=gene3047;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NC_017265.1 RefSeq gene 3269485 3271359 . - . ID=gene3048;Name=YPC_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15285;old_locus_tag=YPC_3399 NC_017265.1 Protein Homology CDS 3269485 3271359 . - 0 ID=cds2967;Parent=gene3048;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11 NC_017265.1 RefSeq gene 3271551 3272156 . - . ID=gene3049;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YPC_RS15290;old_locus_tag=YPC_3401 NC_017265.1 Protein Homology CDS 3271551 3272156 . - 0 ID=cds2968;Parent=gene3049;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11 NC_017265.1 RefSeq gene 3272156 3272488 . - . ID=gene3050;Name=YPC_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15295;old_locus_tag=YPC_3402 NC_017265.1 Protein Homology CDS 3272156 3272488 . - 0 ID=cds2969;Parent=gene3050;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11 NC_017265.1 RefSeq gene 3272544 3274520 . - . ID=gene3051;Name=YPC_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15300;old_locus_tag=YPC_3403 NC_017265.1 Protein Homology CDS 3272544 3274520 . - 0 ID=cds2970;Parent=gene3051;Dbxref=Genbank:WP_002208605.1;Name=WP_002208605.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NC_017265.1 RefSeq gene 3275176 3275738 . - . ID=gene3052;Name=YPC_RS15305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS15305;pseudo=true NC_017265.1 Protein Homology CDS 3275176 3275738 . - 0 ID=cds2971;Parent=gene3052;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;product=adenine phosphoribosyltransferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3276171 3276359 . + . ID=gene3053;Name=YPC_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15310 NC_017265.1 Protein Homology CDS 3276171 3276359 . + 0 ID=cds2972;Parent=gene3053;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11 NC_017265.1 RefSeq gene 3276558 3277094 . + . ID=gene3054;Name=YPC_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15315;old_locus_tag=YPC_3408 NC_017265.1 Protein Homology CDS 3276558 3277094 . + 0 ID=cds2973;Parent=gene3054;Dbxref=Genbank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_002208610.1;transl_table=11 NC_017265.1 RefSeq gene 3277265 3277420 . + . ID=gene3055;Name=YPC_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15320;old_locus_tag=YPC_3409 NC_017265.1 Protein Homology CDS 3277265 3277420 . + 0 ID=cds2974;Parent=gene3055;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11 NC_017265.1 RefSeq gene 3277760 3281122 . - . ID=gene3056;Name=YPC_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15325;old_locus_tag=YPC_3410 NC_017265.1 Protein Homology CDS 3277760 3281122 . - 0 ID=cds2975;Parent=gene3056;Dbxref=Genbank:WP_002208612.1;Name=WP_002208612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208612.1;transl_table=11 NC_017265.1 RefSeq gene 3281418 3281771 . - . ID=gene3057;Name=YPC_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15330;old_locus_tag=YPC_3411 NC_017265.1 Protein Homology CDS 3281418 3281771 . - 0 ID=cds2976;Parent=gene3057;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11 NC_017265.1 RefSeq gene 3281784 3282440 . - . ID=gene3058;Name=YPC_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15335;old_locus_tag=YPC_3412 NC_017265.1 Protein Homology CDS 3281784 3282440 . - 0 ID=cds2977;Parent=gene3058;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11 NC_017265.1 RefSeq gene 3282585 3283772 . + . ID=gene3059;Name=YPC_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15340;old_locus_tag=YPC_3413 NC_017265.1 Protein Homology CDS 3282585 3283772 . + 0 ID=cds2978;Parent=gene3059;Dbxref=Genbank:WP_002208615.1;Name=WP_002208615.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_002208615.1;transl_table=11 NC_017265.1 RefSeq gene 3283789 3286941 . + . ID=gene3060;Name=YPC_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15345;old_locus_tag=YPC_3414 NC_017265.1 Protein Homology CDS 3283789 3286941 . + 0 ID=cds2979;Parent=gene3060;Dbxref=Genbank:WP_015683718.1;Name=WP_015683718.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_015683718.1;transl_table=11 NC_017265.1 RefSeq gene 3287127 3287387 . + . ID=gene3061;Name=YPC_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15350;old_locus_tag=YPC_3415 NC_017265.1 Protein Homology CDS 3287127 3287387 . + 0 ID=cds2980;Parent=gene3061;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11 NC_017265.1 RefSeq gene 3287403 3287546 . + . ID=gene3062;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YPC_RS15355;old_locus_tag=YPC_3416 NC_017265.1 Protein Homology CDS 3287403 3287546 . + 0 ID=cds2981;Parent=gene3062;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NC_017265.1 RefSeq gene 3288420 3288773 . + . ID=gene3063;Name=YPC_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15360;old_locus_tag=YPC_3417 NC_017265.1 Protein Homology CDS 3288420 3288773 . + 0 ID=cds2982;Parent=gene3063;Dbxref=Genbank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11 NC_017265.1 RefSeq gene 3288932 3289300 . + . ID=gene3064;Name=YPC_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15365;old_locus_tag=YPC_3418 NC_017265.1 Protein Homology CDS 3288932 3289300 . + 0 ID=cds2983;Parent=gene3064;Dbxref=Genbank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218472.1;transl_table=11 NC_017265.1 RefSeq gene 3289349 3289552 . + . ID=gene3065;Name=YPC_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15370;old_locus_tag=YPC_3419 NC_017265.1 Protein Homology CDS 3289349 3289552 . + 0 ID=cds2984;Parent=gene3065;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NC_017265.1 RefSeq gene 3290086 3290198 . - . ID=gene3066;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=YPC_RS22030 NC_017265.1 RefSeq ncRNA 3290086 3290198 . - . ID=rna76;Parent=gene3066;Dbxref=ASAP:BBE-0004886,ASAP:BBE-0004886 ERIC;gbkey=ncRNA;gene=ffs;ncrna_class=SRP_RNA;product=4.5S RNA NC_017265.1 RefSeq exon 3290086 3290198 . - . ID=id263;Parent=rna76;Dbxref=ASAP:BBE-0004886,ASAP:BBE-0004886 ERIC;gbkey=ncRNA;gene=ffs;ncrna_class=SRP_RNA;product=4.5S RNA NC_017265.1 RefSeq gene 3290440 3290829 . + . ID=gene3067;Name=YPC_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15375 NC_017265.1 Protein Homology CDS 3290440 3290829 . + 0 ID=cds2985;Parent=gene3067;Dbxref=Genbank:WP_002208623.1;Name=WP_002208623.1;gbkey=CDS;product=6-O-methylguanine DNA methyltransferase;protein_id=WP_002208623.1;transl_table=11 NC_017265.1 RefSeq gene 3290965 3291486 . - . ID=gene3068;Name=YPC_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15380;old_locus_tag=YPC_3422 NC_017265.1 Protein Homology CDS 3290965 3291486 . - 0 ID=cds2986;Parent=gene3068;Dbxref=Genbank:WP_002208624.1;Name=WP_002208624.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002208624.1;transl_table=11 NC_017265.1 RefSeq gene 3291743 3292603 . + . ID=gene3069;Name=YPC_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15385;old_locus_tag=YPC_3424 NC_017265.1 Protein Homology CDS 3291743 3292603 . + 0 ID=cds2987;Parent=gene3069;Dbxref=Genbank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_002208625.1;transl_table=11 NC_017265.1 RefSeq gene 3292863 3294152 . - . ID=gene3070;Name=YPC_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15390;old_locus_tag=YPC_3425 NC_017265.1 Protein Homology CDS 3292863 3294152 . - 0 ID=cds2988;Parent=gene3070;Dbxref=Genbank:WP_002228344.1;Name=WP_002228344.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_002228344.1;transl_table=11 NC_017265.1 RefSeq gene 3294192 3294530 . - . ID=gene3071;Name=YPC_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15395;old_locus_tag=YPC_3426 NC_017265.1 Protein Homology CDS 3294192 3294530 . - 0 ID=cds2989;Parent=gene3071;Dbxref=Genbank:WP_002208627.1;Name=WP_002208627.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_002208627.1;transl_table=11 NC_017265.1 RefSeq gene 3294940 3296763 . - . ID=gene3072;Name=YPC_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15400;old_locus_tag=YPC_3427 NC_017265.1 Protein Homology CDS 3294940 3296763 . - 0 ID=cds2990;Parent=gene3072;Dbxref=Genbank:WP_002208628.1;Name=WP_002208628.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208628.1;transl_table=11 NC_017265.1 RefSeq gene 3296756 3298522 . - . ID=gene3073;Name=YPC_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15405;old_locus_tag=YPC_3428 NC_017265.1 Protein Homology CDS 3296756 3298522 . - 0 ID=cds2991;Parent=gene3073;Dbxref=Genbank:WP_002208629.1;Name=WP_002208629.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208629.1;transl_table=11 NC_017265.1 RefSeq gene 3298624 3299085 . - . ID=gene3074;Name=YPC_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15410;old_locus_tag=YPC_3429 NC_017265.1 Protein Homology CDS 3298624 3299085 . - 0 ID=cds2992;Parent=gene3074;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NC_017265.1 RefSeq gene 3299211 3300251 . + . ID=gene3075;Name=YPC_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15415;old_locus_tag=YPC_3430 NC_017265.1 Protein Homology CDS 3299211 3300251 . + 0 ID=cds2993;Parent=gene3075;Dbxref=Genbank:WP_002208631.1;Name=WP_002208631.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_002208631.1;transl_table=11 NC_017265.1 RefSeq gene 3300463 3301284 . - . ID=gene3076;Name=YPC_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15420;old_locus_tag=YPC_3431 NC_017265.1 Protein Homology CDS 3300463 3301284 . - 0 ID=cds2994;Parent=gene3076;Dbxref=Genbank:WP_002208632.1;Name=WP_002208632.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_002208632.1;transl_table=11 NC_017265.1 RefSeq gene 3301389 3303092 . + . ID=gene3077;Name=YPC_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15425;old_locus_tag=YPC_3432 NC_017265.1 Protein Homology CDS 3301389 3303092 . + 0 ID=cds2995;Parent=gene3077;Dbxref=Genbank:WP_002208633.1;Name=WP_002208633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208633.1;transl_table=11 NC_017265.1 RefSeq gene 3303357 3304055 . + . ID=gene3078;Name=YPC_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15430;old_locus_tag=YPC_3433 NC_017265.1 Protein Homology CDS 3303357 3304055 . + 0 ID=cds2996;Parent=gene3078;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11 NC_017265.1 RefSeq gene 3304141 3304548 . - . ID=gene3079;Name=YPC_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15435;old_locus_tag=YPC_3434 NC_017265.1 Protein Homology CDS 3304141 3304548 . - 0 ID=cds2997;Parent=gene3079;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11 NC_017265.1 RefSeq gene 3304902 3305348 . - . ID=gene3080;Name=YPC_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15440;old_locus_tag=YPC_3436 NC_017265.1 Protein Homology CDS 3304902 3305348 . - 0 ID=cds2998;Parent=gene3080;Dbxref=Genbank:WP_002208637.1;Name=WP_002208637.1;gbkey=CDS;product=transporter;protein_id=WP_002208637.1;transl_table=11 NC_017265.1 RefSeq gene 3305488 3307374 . - . ID=gene3081;Name=YPC_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15445;old_locus_tag=YPC_3437 NC_017265.1 Protein Homology CDS 3305488 3307374 . - 0 ID=cds2999;Parent=gene3081;Dbxref=Genbank:WP_002208638.1;Name=WP_002208638.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208638.1;transl_table=11 NC_017265.1 RefSeq gene 3307675 3307947 . - . ID=gene3082;Name=YPC_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15450;old_locus_tag=YPC_3438 NC_017265.1 Protein Homology CDS 3307675 3307947 . - 0 ID=cds3000;Parent=gene3082;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11 NC_017265.1 RefSeq gene 3308165 3310519 . - . ID=gene3083;Name=YPC_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15455;old_locus_tag=YPC_3439 NC_017265.1 Protein Homology CDS 3308165 3310519 . - 0 ID=cds3001;Parent=gene3083;Dbxref=Genbank:WP_002208640.1;Name=WP_002208640.1;gbkey=CDS;product=peptidase;protein_id=WP_002208640.1;transl_table=11 NC_017265.1 RefSeq gene 3310714 3311985 . - . ID=gene3084;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YPC_RS15460;old_locus_tag=YPC_3440 NC_017265.1 Protein Homology CDS 3310714 3311985 . - 0 ID=cds3002;Parent=gene3084;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NC_017265.1 RefSeq gene 3312191 3312814 . - . ID=gene3085;Name=YPC_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15465;old_locus_tag=YPC_3441 NC_017265.1 Protein Homology CDS 3312191 3312814 . - 0 ID=cds3003;Parent=gene3085;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11 NC_017265.1 RefSeq gene 3313276 3314580 . - . ID=gene3086;Name=YPC_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15470;old_locus_tag=YPC_3442 NC_017265.1 Protein Homology CDS 3313276 3314580 . - 0 ID=cds3004;Parent=gene3086;Dbxref=Genbank:WP_002208643.1;Name=WP_002208643.1;gbkey=CDS;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NC_017265.1 RefSeq gene 3314653 3314838 . - . ID=gene3087;Name=YPC_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15475;old_locus_tag=YPC_3443 NC_017265.1 Protein Homology CDS 3314653 3314838 . - 0 ID=cds3005;Parent=gene3087;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11 NC_017265.1 RefSeq gene 3314997 3315311 . - . ID=gene3088;Name=YPC_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15480;old_locus_tag=YPC_3444 NC_017265.1 Protein Homology CDS 3314997 3315311 . - 0 ID=cds3006;Parent=gene3088;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11 NC_017265.1 RefSeq gene 3315666 3316244 . + . ID=gene3089;Name=YPC_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15485;old_locus_tag=YPC_3445 NC_017265.1 Protein Homology CDS 3315666 3316244 . + 0 ID=cds3007;Parent=gene3089;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11 NC_017265.1 RefSeq gene 3316362 3317840 . + . ID=gene3090;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YPC_RS15490;old_locus_tag=YPC_3446 NC_017265.1 Protein Homology CDS 3316362 3317840 . + 0 ID=cds3008;Parent=gene3090;Dbxref=Genbank:WP_002223277.1;Name=WP_002223277.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_002223277.1;transl_table=11 NC_017265.1 RefSeq gene 3318132 3318899 . + . ID=gene3091;Name=YPC_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15495;old_locus_tag=YPC_3448 NC_017265.1 Protein Homology CDS 3318132 3318899 . + 0 ID=cds3009;Parent=gene3091;Dbxref=Genbank:WP_002208648.1;Name=WP_002208648.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_002208648.1;transl_table=11 NC_017265.1 RefSeq gene 3319269 3320225 . + . ID=gene3092;Name=YPC_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15500;old_locus_tag=YPC_3449 NC_017265.1 Protein Homology CDS 3319269 3320225 . + 0 ID=cds3010;Parent=gene3092;Dbxref=Genbank:WP_002208649.1;Name=WP_002208649.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208649.1;transl_table=11 NC_017265.1 RefSeq gene 3320230 3322221 . + . ID=gene3093;Name=YPC_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15505;old_locus_tag=YPC_3450 NC_017265.1 Protein Homology CDS 3320230 3322221 . + 0 ID=cds3011;Parent=gene3093;Dbxref=Genbank:WP_015683719.1;Name=WP_015683719.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_015683719.1;transl_table=11 NC_017265.1 RefSeq gene 3322211 3322825 . + . ID=gene3094;Name=YPC_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15510;old_locus_tag=YPC_3451 NC_017265.1 Protein Homology CDS 3322211 3322825 . + 0 ID=cds3012;Parent=gene3094;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11 NC_017265.1 RefSeq gene 3322825 3323157 . + . ID=gene3095;Name=YPC_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15515;old_locus_tag=YPC_3452 NC_017265.1 Protein Homology CDS 3322825 3323157 . + 0 ID=cds3013;Parent=gene3095;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11 NC_017265.1 RefSeq gene 3323171 3324058 . + . ID=gene3096;Name=YPC_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15520;old_locus_tag=YPC_3453 NC_017265.1 Protein Homology CDS 3323171 3324058 . + 0 ID=cds3014;Parent=gene3096;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11 NC_017265.1 RefSeq gene 3324542 3325906 . + . ID=gene3097;Name=YPC_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15525;old_locus_tag=YPC_3454 NC_017265.1 Protein Homology CDS 3324542 3325906 . + 0 ID=cds3015;Parent=gene3097;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11 NC_017265.1 RefSeq gene 3326030 3326521 . - . ID=gene3098;Name=YPC_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15530;old_locus_tag=YPC_3455 NC_017265.1 Protein Homology CDS 3326030 3326521 . - 0 ID=cds3016;Parent=gene3098;Dbxref=Genbank:WP_002208655.1;Name=WP_002208655.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_002208655.1;transl_table=11 NC_017265.1 RefSeq gene 3326753 3327664 . + . ID=gene3099;Name=YPC_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15535;old_locus_tag=YPC_3456 NC_017265.1 Protein Homology CDS 3326753 3327664 . + 0 ID=cds3017;Parent=gene3099;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NC_017265.1 RefSeq gene 3327627 3328217 . + . ID=gene3100;Name=YPC_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15540;old_locus_tag=YPC_3457 NC_017265.1 Protein Homology CDS 3327627 3328217 . + 0 ID=cds3018;Parent=gene3100;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11 NC_017265.1 RefSeq gene 3328285 3329736 . - . ID=gene3101;Name=YPC_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15545;old_locus_tag=YPC_3458 NC_017265.1 Protein Homology CDS 3328285 3329736 . - 0 ID=cds3019;Parent=gene3101;Dbxref=Genbank:WP_015683720.1;Name=WP_015683720.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA s(4)U8 sulfurtransferase;protein_id=WP_015683720.1;transl_table=11 NC_017265.1 RefSeq gene 3329834 3330004 . - . ID=gene3102;Name=YPC_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15550;old_locus_tag=YPC_3459 NC_017265.1 Protein Homology CDS 3329834 3330004 . - 0 ID=cds3020;Parent=gene3102;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11 NC_017265.1 RefSeq gene 3330086 3330340 . + . ID=gene3103;Name=YPC_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15555;old_locus_tag=YPC_3460 NC_017265.1 Protein Homology CDS 3330086 3330340 . + 0 ID=cds3021;Parent=gene3103;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11 NC_017265.1 RefSeq gene 3330345 3331265 . + . ID=gene3104;Name=YPC_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15560;old_locus_tag=YPC_3461 NC_017265.1 Protein Homology CDS 3330345 3331265 . + 0 ID=cds3022;Parent=gene3104;Dbxref=Genbank:WP_002208661.1;Name=WP_002208661.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_002208661.1;transl_table=11 NC_017265.1 RefSeq gene 3331421 3333280 . + . ID=gene3105;Name=YPC_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15565;old_locus_tag=YPC_3462 NC_017265.1 Protein Homology CDS 3331421 3333280 . + 0 ID=cds3023;Parent=gene3105;Dbxref=Genbank:WP_002208662.1;Name=WP_002208662.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_002208662.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3333347 3334069 . + . ID=id264;gbkey=repeat_region NC_017265.1 RefSeq gene 3333459 3333917 . - . ID=gene3106;Name=YPC_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15570;old_locus_tag=YPC_3463 NC_017265.1 Protein Homology CDS 3333459 3333917 . - 0 ID=cds3024;Parent=gene3106;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 3333907 3334071 . - . ID=gene3107;Name=YPC_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15575 NC_017265.1 Protein Homology CDS 3333907 3334071 . - 0 ID=cds3025;Parent=gene3107;Dbxref=Genbank:WP_002217353.1;Name=WP_002217353.1;gbkey=CDS;product=invasin;protein_id=WP_002217353.1;transl_table=11 NC_017265.1 RefSeq gene 3334131 3334616 . - . ID=gene3108;Name=YPC_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15580;old_locus_tag=YPC_3465 NC_017265.1 Protein Homology CDS 3334131 3334616 . - 0 ID=cds3026;Parent=gene3108;Dbxref=Genbank:WP_002208663.1;Name=WP_002208663.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NC_017265.1 RefSeq gene 3334609 3335598 . - . ID=gene3109;Name=YPC_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15585;old_locus_tag=YPC_3466 NC_017265.1 Protein Homology CDS 3334609 3335598 . - 0 ID=cds3027;Parent=gene3109;Dbxref=Genbank:WP_002208664.1;Name=WP_002208664.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_002208664.1;transl_table=11 NC_017265.1 RefSeq gene 3335839 3336255 . - . ID=gene3110;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YPC_RS15590;old_locus_tag=YPC_3467 NC_017265.1 Protein Homology CDS 3335839 3336255 . - 0 ID=cds3028;Parent=gene3110;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11 NC_017265.1 RefSeq gene 3336276 3336746 . - . ID=gene3111;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YPC_RS15595;old_locus_tag=YPC_3468 NC_017265.1 Protein Homology CDS 3336276 3336746 . - 0 ID=cds3029;Parent=gene3111;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NC_017265.1 RefSeq gene 3336882 3337991 . - . ID=gene3112;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YPC_RS15600;old_locus_tag=YPC_3469 NC_017265.1 Protein Homology CDS 3336882 3337991 . - 0 ID=cds3030;Parent=gene3112;Dbxref=Genbank:WP_015683721.1;Name=WP_015683721.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_015683721.1;transl_table=11 NC_017265.1 RefSeq gene 3338141 3338590 . - . ID=gene3113;Name=YPC_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15605;old_locus_tag=YPC_3470 NC_017265.1 Protein Homology CDS 3338141 3338590 . - 0 ID=cds3031;Parent=gene3113;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11 NC_017265.1 RefSeq gene 3338661 3339254 . - . ID=gene3114;Name=YPC_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15610;old_locus_tag=YPC_3471 NC_017265.1 Protein Homology CDS 3338661 3339254 . - 0 ID=cds3032;Parent=gene3114;Dbxref=Genbank:WP_002217141.1;Name=WP_002217141.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217141.1;transl_table=11 NC_017265.1 RefSeq gene 3339287 3339982 . - . ID=gene3115;Name=YPC_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15615;old_locus_tag=YPC_3472 NC_017265.1 Protein Homology CDS 3339287 3339982 . - 0 ID=cds3033;Parent=gene3115;Dbxref=Genbank:WP_002217139.1;Name=WP_002217139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217139.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3340167 3340888 . + . ID=id265;gbkey=repeat_region NC_017265.1 RefSeq gene 3340280 3340738 . - . ID=gene3116;Name=YPC_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15620;old_locus_tag=YPC_3473 NC_017265.1 Protein Homology CDS 3340280 3340738 . - 0 ID=cds3034;Parent=gene3116;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 3340945 3341913 . - . ID=gene3117;Name=YPC_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15625;old_locus_tag=YPC_3475 NC_017265.1 Protein Homology CDS 3340945 3341913 . - 0 ID=cds3035;Parent=gene3117;Dbxref=Genbank:WP_002208669.1;Name=WP_002208669.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NC_017265.1 RefSeq gene 3341924 3343738 . - . ID=gene3118;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YPC_RS15630;old_locus_tag=YPC_3476 NC_017265.1 Protein Homology CDS 3341924 3343738 . - 0 ID=cds3036;Parent=gene3118;Dbxref=Genbank:WP_012413510.1;Name=WP_012413510.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_012413510.1;transl_table=11 NC_017265.1 RefSeq gene 3343799 3344134 . - . ID=gene3119;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YPC_RS15635;old_locus_tag=YPC_3477 NC_017265.1 Protein Homology CDS 3343799 3344134 . - 0 ID=cds3037;Parent=gene3119;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NC_017265.1 RefSeq gene 3344246 3345370 . - . ID=gene3120;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YPC_RS15640;old_locus_tag=YPC_3478 NC_017265.1 Protein Homology CDS 3344246 3345370 . - 0 ID=cds3038;Parent=gene3120;Dbxref=Genbank:WP_002208672.1;Name=WP_002208672.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_002208672.1;transl_table=11 NC_017265.1 RefSeq gene 3345463 3346533 . - . ID=gene3121;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YPC_RS15645;old_locus_tag=YPC_3479 NC_017265.1 Protein Homology CDS 3345463 3346533 . - 0 ID=cds3039;Parent=gene3121;Dbxref=Genbank:WP_002208673.1;Name=WP_002208673.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_002208673.1;transl_table=11 NC_017265.1 RefSeq gene 3346736 3347317 . + . ID=gene3122;Name=YPC_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15650;old_locus_tag=YPC_3480 NC_017265.1 Protein Homology CDS 3346736 3347317 . + 0 ID=cds3040;Parent=gene3122;Dbxref=Genbank:WP_002216927.1;Name=WP_002216927.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_002216927.1;transl_table=11 NC_017265.1 RefSeq gene 3347616 3348218 . + . ID=gene3123;Name=YPC_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15655;old_locus_tag=YPC_3481 NC_017265.1 Protein Homology CDS 3347616 3348218 . + 0 ID=cds3041;Parent=gene3123;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11 NC_017265.1 RefSeq gene 3348307 3348438 . - . ID=gene3124;Name=YPC_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15660 NC_017265.1 Protein Homology CDS 3348307 3348438 . - 0 ID=cds3042;Parent=gene3124;Dbxref=Genbank:WP_002216930.1;Name=WP_002216930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216930.1;transl_table=11 NC_017265.1 RefSeq gene 3348607 3348897 . + . ID=gene3125;Name=YPC_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15665 NC_017265.1 Protein Homology CDS 3348607 3348897 . + 0 ID=cds3043;Parent=gene3125;Dbxref=Genbank:WP_002232170.1;Name=WP_002232170.1;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=WP_002232170.1;transl_table=11 NC_017265.1 RefSeq gene 3348857 3350371 . + . ID=gene3126;Name=YPC_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15670 NC_017265.1 Protein Homology CDS 3348857 3350371 . + 0 ID=cds3044;Parent=gene3126;Dbxref=Genbank:WP_002216937.1;Name=WP_002216937.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_002216937.1;transl_table=11 NC_017265.1 RefSeq gene 3350579 3351259 . - . ID=gene3127;Name=YPC_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15675;old_locus_tag=YPC_3485 NC_017265.1 Protein Homology CDS 3350579 3351259 . - 0 ID=cds3045;Parent=gene3127;Dbxref=Genbank:WP_002208677.1;Name=WP_002208677.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002208677.1;transl_table=11 NC_017265.1 RefSeq gene 3351414 3353243 . - . ID=gene3128;Name=YPC_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15680;old_locus_tag=YPC_3486 NC_017265.1 Protein Homology CDS 3351414 3353243 . - 0 ID=cds3046;Parent=gene3128;Dbxref=Genbank:WP_002208678.1;Name=WP_002208678.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_002208678.1;transl_table=11 NC_017265.1 RefSeq gene 3353804 3355195 . - . ID=gene3129;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPC_RS15685;old_locus_tag=YPC_3487 NC_017265.1 Protein Homology CDS 3353804 3355195 . - 0 ID=cds3047;Parent=gene3129;Dbxref=Genbank:WP_002223269.1;Name=WP_002223269.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002223269.1;transl_table=11 NC_017265.1 RefSeq gene 3355271 3356590 . - . ID=gene3130;Name=YPC_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15690;old_locus_tag=YPC_3488 NC_017265.1 Protein Homology CDS 3355271 3356590 . - 0 ID=cds3048;Parent=gene3130;Dbxref=Genbank:WP_002208680.1;Name=WP_002208680.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_002208680.1;transl_table=11 NC_017265.1 RefSeq gene 3357064 3358128 . - . ID=gene3131;Name=YPC_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15695;old_locus_tag=YPC_3489 NC_017265.1 Protein Homology CDS 3357064 3358128 . - 0 ID=cds3049;Parent=gene3131;Dbxref=Genbank:WP_002215524.1;Name=WP_002215524.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215524.1;transl_table=11 NC_017265.1 RefSeq gene 3358150 3359466 . - . ID=gene3132;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YPC_RS15700;old_locus_tag=YPC_3490 NC_017265.1 Protein Homology CDS 3358150 3359466 . - 0 ID=cds3050;Parent=gene3132;Dbxref=Genbank:WP_002208684.1;Name=WP_002208684.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_002208684.1;transl_table=11 NC_017265.1 RefSeq gene 3359491 3360180 . - . ID=gene3133;Name=YPC_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15705;old_locus_tag=YPC_3491 NC_017265.1 Protein Homology CDS 3359491 3360180 . - 0 ID=cds3051;Parent=gene3133;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11 NC_017265.1 RefSeq gene 3360210 3360329 . - . ID=gene3134;Name=YPC_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15710;old_locus_tag=YPC_3492 NC_017265.1 Protein Homology CDS 3360210 3360329 . - 0 ID=cds3052;Parent=gene3134;Dbxref=Genbank:WP_002208686.1;Name=WP_002208686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208686.1;transl_table=11 NC_017265.1 RefSeq gene 3360448 3361692 . + . ID=gene3135;Name=YPC_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15715;old_locus_tag=YPC_3493 NC_017265.1 Protein Homology CDS 3360448 3361692 . + 0 ID=cds3053;Parent=gene3135;Dbxref=Genbank:WP_002208687.1;Name=WP_002208687.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease SbcD;protein_id=WP_002208687.1;transl_table=11 NC_017265.1 RefSeq gene 3361689 3365378 . + . ID=gene3136;Name=YPC_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15720;old_locus_tag=YPC_3494 NC_017265.1 Protein Homology CDS 3361689 3365378 . + 0 ID=cds3054;Parent=gene3136;Dbxref=Genbank:WP_002223265.1;Name=WP_002223265.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_002223265.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3365506 3365630 . + . ID=id266;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 3365632 3365925 . + . ID=id267;gbkey=repeat_region NC_017265.1 RefSeq gene 3365980 3366894 . - . ID=gene3137;Name=YPC_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15725;old_locus_tag=YPC_3495 NC_017265.1 Protein Homology CDS 3365980 3366894 . - 0 ID=cds3055;Parent=gene3137;Dbxref=Genbank:WP_002208690.1;Name=WP_002208690.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_002208690.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3367254 3369214 . + . ID=id268;gbkey=repeat_region NC_017265.1 RefSeq gene 3367323 3368102 . - . ID=gene3138;Name=YPC_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15730;old_locus_tag=YPC_3496 NC_017265.1 Protein Homology CDS 3367323 3368102 . - 0 ID=cds3056;Parent=gene3138;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 3368102 3369124 . - . ID=gene3139;Name=YPC_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15735;old_locus_tag=YPC_3497 NC_017265.1 Protein Homology CDS 3368102 3369124 . - 0 ID=cds3057;Parent=gene3139;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 3369187 3370098 . + . ID=gene3140;Name=YPC_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15740;old_locus_tag=YPC_3498 NC_017265.1 Protein Homology CDS 3369187 3370098 . + 0 ID=cds3058;Parent=gene3140;Dbxref=Genbank:WP_042468846.1;Name=WP_042468846.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination associated protein;protein_id=WP_042468846.1;transl_table=11 NC_017265.1 RefSeq gene 3370334 3370621 . - . ID=gene3141;Name=YPC_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15745;old_locus_tag=YPC_3499 NC_017265.1 Protein Homology CDS 3370334 3370621 . - 0 ID=cds3059;Parent=gene3141;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11 NC_017265.1 RefSeq gene 3370685 3370855 . - . ID=gene3142;Name=YPC_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15750 NC_017265.1 Protein Homology CDS 3370685 3370855 . - 0 ID=cds3060;Parent=gene3142;Dbxref=Genbank:WP_002215533.1;Name=WP_002215533.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215533.1;transl_table=11 NC_017265.1 RefSeq gene 3371111 3371635 . - . ID=gene3143;Name=YPC_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15755;old_locus_tag=YPC_3500 NC_017265.1 Protein Homology CDS 3371111 3371635 . - 0 ID=cds3061;Parent=gene3143;Dbxref=Genbank:WP_002208693.1;Name=WP_002208693.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_002208693.1;transl_table=11 NC_017265.1 RefSeq gene 3371882 3372439 . - . ID=gene3144;Name=YPC_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15760;old_locus_tag=YPC_3501 NC_017265.1 Protein Homology CDS 3371882 3372439 . - 0 ID=cds3062;Parent=gene3144;Dbxref=Genbank:WP_002208694.1;Name=WP_002208694.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208694.1;transl_table=11 NC_017265.1 RefSeq gene 3372707 3372922 . + . ID=gene3145;Name=YPC_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15765;old_locus_tag=YPC_3502 NC_017265.1 Protein Homology CDS 3372707 3372922 . + 0 ID=cds3063;Parent=gene3145;Dbxref=Genbank:WP_002215536.1;Name=WP_002215536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215536.1;transl_table=11 NC_017265.1 RefSeq gene 3373169 3373732 . - . ID=gene3146;Name=YPC_RS15770;end_range=3373732,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS15770;old_locus_tag=YPC_3503;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 3373169 3373732 . - 0 ID=cds3064;Parent=gene3146;end_range=3373732,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3373936 3374190 . - . ID=gene3147;Name=YPC_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15775;old_locus_tag=YPC_3505 NC_017265.1 Protein Homology CDS 3373936 3374190 . - 0 ID=cds3065;Parent=gene3147;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11 NC_017265.1 RefSeq gene 3374388 3375137 . - . ID=gene3148;Name=YPC_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15780;old_locus_tag=YPC_3506 NC_017265.1 Protein Homology CDS 3374388 3375137 . - 0 ID=cds3066;Parent=gene3148;Dbxref=Genbank:WP_002264519.1;Name=WP_002264519.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_002264519.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3375353 3376073 . + . ID=id269;gbkey=repeat_region NC_017265.1 RefSeq gene 3375463 3375921 . - . ID=gene3149;Name=YPC_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15785;old_locus_tag=YPC_3507 NC_017265.1 Protein Homology CDS 3375463 3375921 . - 0 ID=cds3067;Parent=gene3149;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3376184 3377443 . - . ID=gene3150;Name=YPC_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15790;old_locus_tag=YPC_3511 NC_017265.1 Protein Homology CDS 3376184 3377443 . - 0 ID=cds3068;Parent=gene3150;Dbxref=Genbank:WP_002208700.1;Name=WP_002208700.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_002208700.1;transl_table=11 NC_017265.1 RefSeq gene 3377453 3378556 . - . ID=gene3151;Name=YPC_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15795;old_locus_tag=YPC_3512 NC_017265.1 Protein Homology CDS 3377453 3378556 . - 0 ID=cds3069;Parent=gene3151;Dbxref=Genbank:WP_002208701.1;Name=WP_002208701.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NC_017265.1 RefSeq gene 3378733 3379134 . - . ID=gene3152;Name=YPC_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15800;old_locus_tag=YPC_3513 NC_017265.1 Protein Homology CDS 3378733 3379134 . - 0 ID=cds3070;Parent=gene3152;Dbxref=Genbank:WP_002208702.1;Name=WP_002208702.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NC_017265.1 RefSeq gene 3379194 3380441 . - . ID=gene3153;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YPC_RS15805;old_locus_tag=YPC_3514 NC_017265.1 Protein Homology CDS 3379194 3380441 . - 0 ID=cds3071;Parent=gene3153;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11 NC_017265.1 RefSeq gene 3380568 3381026 . - . ID=gene3154;Name=YPC_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15810;old_locus_tag=YPC_3515 NC_017265.1 Protein Homology CDS 3380568 3381026 . - 0 ID=cds3072;Parent=gene3154;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NC_017265.1 RefSeq gene 3381453 3381758 . + . ID=gene3155;Name=YPC_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15815;old_locus_tag=YPC_3517 NC_017265.1 Protein Homology CDS 3381453 3381758 . + 0 ID=cds3073;Parent=gene3155;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11 NC_017265.1 RefSeq gene 3381955 3383559 . + . ID=gene3156;Name=YPC_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15820;old_locus_tag=YPC_3518 NC_017265.1 Protein Homology CDS 3381955 3383559 . + 0 ID=cds3074;Parent=gene3156;Dbxref=Genbank:WP_015683723.1;Name=WP_015683723.1;gbkey=CDS;product=carbohydrate-binding protein;protein_id=WP_015683723.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3383594 3384316 . + . ID=id270;gbkey=repeat_region NC_017265.1 RefSeq gene 3383745 3384203 . + . ID=gene3157;Name=YPC_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15825;old_locus_tag=YPC_3520 NC_017265.1 Protein Homology CDS 3383745 3384203 . + 0 ID=cds3075;Parent=gene3157;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3384729 3385514 . - . ID=gene3158;Name=YPC_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15830;old_locus_tag=YPC_3521 NC_017265.1 Protein Homology CDS 3384729 3385514 . - 0 ID=cds3076;Parent=gene3158;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11 NC_017265.1 RefSeq gene 3386362 3386517 . - . ID=gene3159;Name=YPC_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15835 NC_017265.1 Protein Homology CDS 3386362 3386517 . - 0 ID=cds3077;Parent=gene3159;Dbxref=Genbank:WP_002216045.1;Name=WP_002216045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216045.1;transl_table=11 NC_017265.1 RefSeq gene 3387515 3388975 . + . ID=gene3160;Name=YPC_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15840;old_locus_tag=YPC_3522 NC_017265.1 Protein Homology CDS 3387515 3388975 . + 0 ID=cds3078;Parent=gene3160;Dbxref=Genbank:WP_002208707.1;Name=WP_002208707.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_002208707.1;transl_table=11 NC_017265.1 RefSeq gene 3389089 3390147 . - . ID=gene3161;Name=YPC_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15845;old_locus_tag=YPC_3524 NC_017265.1 Protein Homology CDS 3389089 3390147 . - 0 ID=cds3079;Parent=gene3161;Dbxref=Genbank:WP_015683725.1;Name=WP_015683725.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_015683725.1;transl_table=11 NC_017265.1 RefSeq gene 3390503 3391450 . + . ID=gene3162;Name=YPC_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15850;old_locus_tag=YPC_3525 NC_017265.1 Protein Homology CDS 3390503 3391450 . + 0 ID=cds3080;Parent=gene3162;Dbxref=Genbank:WP_002208709.1;Name=WP_002208709.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002208709.1;transl_table=11 NC_017265.1 RefSeq gene 3391694 3391921 . - . ID=gene3163;Name=YPC_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15855;old_locus_tag=YPC_3526 NC_017265.1 Protein Homology CDS 3391694 3391921 . - 0 ID=cds3081;Parent=gene3163;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11 NC_017265.1 RefSeq gene 3391934 3392929 . - . ID=gene3164;Name=YPC_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15860;old_locus_tag=YPC_3527 NC_017265.1 Protein Homology CDS 3391934 3392929 . - 0 ID=cds3082;Parent=gene3164;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11 NC_017265.1 RefSeq gene 3392997 3394220 . - . ID=gene3165;Name=YPC_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15865;old_locus_tag=YPC_3528 NC_017265.1 Protein Homology CDS 3392997 3394220 . - 0 ID=cds3083;Parent=gene3165;Dbxref=Genbank:WP_002208711.1;Name=WP_002208711.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_002208711.1;transl_table=11 NC_017265.1 RefSeq gene 3394236 3394832 . - . ID=gene3166;Name=YPC_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15870;old_locus_tag=YPC_3529 NC_017265.1 Protein Homology CDS 3394236 3394832 . - 0 ID=cds3084;Parent=gene3166;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11 NC_017265.1 RefSeq gene 3394839 3395468 . - . ID=gene3167;Name=YPC_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15875;old_locus_tag=YPC_3530 NC_017265.1 Protein Homology CDS 3394839 3395468 . - 0 ID=cds3085;Parent=gene3167;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11 NC_017265.1 RefSeq gene 3395461 3396261 . - . ID=gene3168;Name=YPC_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15880;old_locus_tag=YPC_3531 NC_017265.1 Protein Homology CDS 3395461 3396261 . - 0 ID=cds3086;Parent=gene3168;Dbxref=Genbank:WP_002208715.1;Name=WP_002208715.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_002208715.1;transl_table=11 NC_017265.1 RefSeq gene 3396251 3397492 . - . ID=gene3169;Name=YPC_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15885;old_locus_tag=YPC_3532 NC_017265.1 Protein Homology CDS 3396251 3397492 . - 0 ID=cds3087;Parent=gene3169;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11 NC_017265.1 RefSeq gene 3397496 3398839 . - . ID=gene3170;Name=YPC_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15890;old_locus_tag=YPC_3533 NC_017265.1 Protein Homology CDS 3397496 3398839 . - 0 ID=cds3088;Parent=gene3170;Dbxref=Genbank:WP_002208717.1;Name=WP_002208717.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11 NC_017265.1 RefSeq gene 3399445 3400107 . + . ID=gene3171;Name=YPC_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15895;old_locus_tag=YPC_3535 NC_017265.1 Protein Homology CDS 3399445 3400107 . + 0 ID=cds3089;Parent=gene3171;Dbxref=Genbank:WP_002228335.1;Name=WP_002228335.1;gbkey=CDS;product=transpeptidase;protein_id=WP_002228335.1;transl_table=11 NC_017265.1 RefSeq gene 3400072 3400845 . - . ID=gene3172;Name=YPC_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15900;old_locus_tag=YPC_3536 NC_017265.1 Protein Homology CDS 3400072 3400845 . - 0 ID=cds3090;Parent=gene3172;Dbxref=Genbank:WP_002208719.1;Name=WP_002208719.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NC_017265.1 RefSeq gene 3401048 3401629 . - . ID=gene3173;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=YPC_RS15905;old_locus_tag=YPC_3537 NC_017265.1 Protein Homology CDS 3401048 3401629 . - 0 ID=cds3091;Parent=gene3173;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11 NC_017265.1 RefSeq gene 3401869 3404316 . + . ID=gene3174;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YPC_RS15910;old_locus_tag=YPC_3538 NC_017265.1 Protein Homology CDS 3401869 3404316 . + 0 ID=cds3092;Parent=gene3174;Dbxref=Genbank:WP_002214691.1;Name=WP_002214691.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_002214691.1;transl_table=11 NC_017265.1 RefSeq gene 3404488 3405234 . - . ID=gene3175;Name=YPC_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15915;old_locus_tag=YPC_3539 NC_017265.1 Protein Homology CDS 3404488 3405234 . - 0 ID=cds3093;Parent=gene3175;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NC_017265.1 RefSeq gene 3405236 3407089 . - . ID=gene3176;Name=YPC_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15920;old_locus_tag=YPC_3540 NC_017265.1 Protein Homology CDS 3405236 3407089 . - 0 ID=cds3094;Parent=gene3176;Dbxref=Genbank:WP_002208722.1;Name=WP_002208722.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002208722.1;transl_table=11 NC_017265.1 RefSeq gene 3407244 3411089 . - . ID=gene3177;Name=YPC_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15925;old_locus_tag=YPC_3541 NC_017265.1 Protein Homology CDS 3407244 3411089 . - 0 ID=cds3095;Parent=gene3177;Dbxref=Genbank:WP_025470848.1;Name=WP_025470848.1;gbkey=CDS;product=adhesin;protein_id=WP_025470848.1;transl_table=11 NC_017265.1 RefSeq gene 3411847 3412977 . - . ID=gene3178;Name=YPC_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15930;old_locus_tag=YPC_3542 NC_017265.1 Protein Homology CDS 3411847 3412977 . - 0 ID=cds3096;Parent=gene3178;Dbxref=Genbank:WP_002232150.1;Name=WP_002232150.1;gbkey=CDS;product=adhesin;protein_id=WP_002232150.1;transl_table=11 NC_017265.1 RefSeq gene 3413018 3414807 . - . ID=gene3179;Name=YPC_RS15935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS15935;pseudo=true NC_017265.1 Protein Homology CDS 3413018 3414807 . - 0 ID=cds3097;Parent=gene3179;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemolysin secretion protein ShlB;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 3415534 3415713 . + . ID=id271;gbkey=repeat_region NC_017265.1 RefSeq gene 3415896 3417188 . - . ID=gene3180;Name=YPC_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15940;old_locus_tag=YPC_3548 NC_017265.1 Protein Homology CDS 3415896 3417188 . - 0 ID=cds3098;Parent=gene3180;Dbxref=Genbank:WP_002208729.1;Name=WP_002208729.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_002208729.1;transl_table=11 NC_017265.1 RefSeq gene 3417188 3418531 . - . ID=gene3181;Name=YPC_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15945;old_locus_tag=YPC_3549 NC_017265.1 Protein Homology CDS 3417188 3418531 . - 0 ID=cds3099;Parent=gene3181;Dbxref=Genbank:WP_002228332.1;Name=WP_002228332.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_002228332.1;transl_table=11 NC_017265.1 RefSeq gene 3418563 3419309 . - . ID=gene3182;Name=YPC_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15950;old_locus_tag=YPC_3550 NC_017265.1 Protein Homology CDS 3418563 3419309 . - 0 ID=cds3100;Parent=gene3182;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NC_017265.1 RefSeq gene 3419290 3419943 . - . ID=gene3183;Name=YPC_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15955;old_locus_tag=YPC_3551 NC_017265.1 Protein Homology CDS 3419290 3419943 . - 0 ID=cds3101;Parent=gene3183;Dbxref=Genbank:WP_002208733.1;Name=WP_002208733.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002208733.1;transl_table=11 NC_017265.1 RefSeq gene 3419940 3420608 . - . ID=gene3184;Name=YPC_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15960;old_locus_tag=YPC_3552 NC_017265.1 Protein Homology CDS 3419940 3420608 . - 0 ID=cds3102;Parent=gene3184;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NC_017265.1 RefSeq gene 3420621 3421409 . - . ID=gene3185;Name=YPC_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15965;old_locus_tag=YPC_3553 NC_017265.1 Protein Homology CDS 3420621 3421409 . - 0 ID=cds3103;Parent=gene3185;Dbxref=Genbank:WP_002208735.1;Name=WP_002208735.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002208735.1;transl_table=11 NC_017265.1 RefSeq gene 3421520 3421735 . - . ID=gene3186;Name=YPC_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15970;old_locus_tag=YPC_3554 NC_017265.1 Protein Homology CDS 3421520 3421735 . - 0 ID=cds3104;Parent=gene3186;Dbxref=Genbank:WP_002215957.1;Name=WP_002215957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215957.1;transl_table=11 NC_017265.1 RefSeq gene 3421737 3422570 . - . ID=gene3187;Name=YPC_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15975;old_locus_tag=YPC_3555 NC_017265.1 Protein Homology CDS 3421737 3422570 . - 0 ID=cds3105;Parent=gene3187;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NC_017265.1 RefSeq gene 3422880 3423083 . + . ID=gene3188;Name=YPC_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15980;old_locus_tag=YPC_3557 NC_017265.1 Protein Homology CDS 3422880 3423083 . + 0 ID=cds3106;Parent=gene3188;Dbxref=Genbank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208738.1;transl_table=11 NC_017265.1 RefSeq gene 3423080 3424477 . + . ID=gene3189;Name=YPC_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15985;old_locus_tag=YPC_3558 NC_017265.1 Protein Homology CDS 3423080 3424477 . + 0 ID=cds3107;Parent=gene3189;Dbxref=Genbank:WP_002208739.1;Name=WP_002208739.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_002208739.1;transl_table=11 NC_017265.1 RefSeq gene 3424587 3424973 . + . ID=gene3190;Name=YPC_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15990;old_locus_tag=YPC_3559 NC_017265.1 Protein Homology CDS 3424587 3424973 . + 0 ID=cds3108;Parent=gene3190;Dbxref=Genbank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002264506.1;transl_table=11 NC_017265.1 RefSeq gene 3425186 3426385 . + . ID=gene3191;Name=YPC_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS15995;old_locus_tag=YPC_3560 NC_017265.1 Protein Homology CDS 3425186 3426385 . + 0 ID=cds3109;Parent=gene3191;Dbxref=Genbank:WP_002208741.1;Name=WP_002208741.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002208741.1;transl_table=11 NC_017265.1 RefSeq gene 3426545 3427318 . + . ID=gene3192;Name=YPC_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16000;old_locus_tag=YPC_3561 NC_017265.1 Protein Homology CDS 3426545 3427318 . + 0 ID=cds3110;Parent=gene3192;Dbxref=Genbank:WP_002208742.1;Name=WP_002208742.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002208742.1;transl_table=11 NC_017265.1 RefSeq gene 3427315 3427656 . + . ID=gene3193;Name=YPC_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16005;old_locus_tag=YPC_3562 NC_017265.1 Protein Homology CDS 3427315 3427656 . + 0 ID=cds3111;Parent=gene3193;Dbxref=Genbank:WP_002208743.1;Name=WP_002208743.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002208743.1;transl_table=11 NC_017265.1 RefSeq gene 3427828 3428340 . + . ID=gene3194;Name=YPC_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16010;old_locus_tag=YPC_3563 NC_017265.1 Protein Homology CDS 3427828 3428340 . + 0 ID=cds3112;Parent=gene3194;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11 NC_017265.1 RefSeq gene 3428724 3429896 . + . ID=gene3195;Name=YPC_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16015;old_locus_tag=YPC_3564 NC_017265.1 Protein Homology CDS 3428724 3429896 . + 0 ID=cds3113;Parent=gene3195;Dbxref=Genbank:WP_002208745.1;Name=WP_002208745.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein A;protein_id=WP_002208745.1;transl_table=11 NC_017265.1 RefSeq gene 3429935 3431470 . + . ID=gene3196;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YPC_RS16020;old_locus_tag=YPC_3565 NC_017265.1 Protein Homology CDS 3429935 3431470 . + 0 ID=cds3114;Parent=gene3196;Dbxref=Genbank:WP_002208746.1;Name=WP_002208746.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NC_017265.1 RefSeq gene 3431593 3432759 . - . ID=gene3197;Name=YPC_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16025;old_locus_tag=YPC_3566 NC_017265.1 Protein Homology CDS 3431593 3432759 . - 0 ID=cds3115;Parent=gene3197;Dbxref=Genbank:WP_002208747.1;Name=WP_002208747.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208747.1;transl_table=11 NC_017265.1 RefSeq gene 3433011 3433448 . + . ID=gene3198;Name=YPC_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16030;old_locus_tag=YPC_3567 NC_017265.1 Protein Homology CDS 3433011 3433448 . + 0 ID=cds3116;Parent=gene3198;Dbxref=Genbank:WP_002216643.1;Name=WP_002216643.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002216643.1;transl_table=11 NC_017265.1 RefSeq gene 3433618 3434367 . + . ID=gene3199;Name=YPC_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16035;old_locus_tag=YPC_3569 NC_017265.1 Protein Homology CDS 3433618 3434367 . + 0 ID=cds3117;Parent=gene3199;Dbxref=Genbank:WP_002208749.1;Name=WP_002208749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208749.1;transl_table=11 NC_017265.1 RefSeq gene 3434410 3437052 . + . ID=gene3200;Name=YPC_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16040;old_locus_tag=YPC_3570 NC_017265.1 Protein Homology CDS 3434410 3437052 . + 0 ID=cds3118;Parent=gene3200;Dbxref=Genbank:WP_002223249.1;Name=WP_002223249.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=protein lysine acetyltransferase;protein_id=WP_002223249.1;transl_table=11 NC_017265.1 RefSeq gene 3437228 3438583 . + . ID=gene3201;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YPC_RS16045;old_locus_tag=YPC_3571 NC_017265.1 Protein Homology CDS 3437228 3438583 . + 0 ID=cds3119;Parent=gene3201;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11 NC_017265.1 RefSeq gene 3438645 3438986 . + . ID=gene3202;Name=YPC_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16050;old_locus_tag=YPC_3572 NC_017265.1 Protein Homology CDS 3438645 3438986 . + 0 ID=cds3120;Parent=gene3202;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11 NC_017265.1 RefSeq gene 3439095 3439286 . - . ID=gene3203;Name=YPC_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16055 NC_017265.1 Protein Homology CDS 3439095 3439286 . - 0 ID=cds3121;Parent=gene3203;Dbxref=Genbank:WP_002360510.1;Name=WP_002360510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002360510.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3439111 3445007 . + . ID=id272;gbkey=repeat_region NC_017265.1 RefSeq gene 3439374 3439489 . - . ID=gene3204;Name=YPC_RS16060;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS16060;old_locus_tag=YPC_3573 NC_017265.1 cmsearch rRNA 3439374 3439489 . - . ID=rna77;Parent=gene3204;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 3439374 3439489 . - . ID=id273;Parent=rna77;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 3439581 3442514 . - . ID=gene3205;Name=YPC_RS16065;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS16065;old_locus_tag=YPC_3574 NC_017265.1 RefSeq rRNA 3439581 3442514 . - . ID=rna78;Parent=gene3205;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq exon 3439581 3442514 . - . ID=id274;Parent=rna78;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq gene 3442724 3442799 . - . ID=gene3206;Name=YPC_RS16070;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS16070;old_locus_tag=YPC_3575 NC_017265.1 tRNAscan-SE tRNA 3442724 3442799 . - . ID=rna79;Parent=gene3206;anticodon=(pos:complement(3442764..3442766));gbkey=tRNA;product=tRNA-Ala NC_017265.1 tRNAscan-SE exon 3442724 3442799 . - . ID=id275;Parent=rna79;anticodon=(pos:complement(3442764..3442766));gbkey=tRNA;product=tRNA-Ala NC_017265.1 RefSeq gene 3442851 3442927 . - . ID=gene3207;Name=YPC_RS16075;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS16075;old_locus_tag=YPC_3576 NC_017265.1 tRNAscan-SE tRNA 3442851 3442927 . - . ID=rna80;Parent=gene3207;anticodon=(pos:complement(3442891..3442893));gbkey=tRNA;product=tRNA-Ile NC_017265.1 tRNAscan-SE exon 3442851 3442927 . - . ID=id276;Parent=rna80;anticodon=(pos:complement(3442891..3442893));gbkey=tRNA;product=tRNA-Ile NC_017265.1 RefSeq gene 3443027 3444575 . - . ID=gene3208;Name=YPC_RS16080;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS16080;old_locus_tag=YPC_3577 NC_017265.1 RefSeq rRNA 3443027 3444575 . - . ID=rna81;Parent=gene3208;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq exon 3443027 3444575 . - . ID=id277;Parent=rna81;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq gene 3445089 3447662 . - . ID=gene3209;Name=YPC_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16090;old_locus_tag=YPC_3579 NC_017265.1 Protein Homology CDS 3445089 3447662 . - 0 ID=cds3122;Parent=gene3209;Dbxref=Genbank:WP_002217405.1;Name=WP_002217405.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_002217405.1;transl_table=11 NC_017265.1 RefSeq gene 3447792 3448523 . - . ID=gene3210;Name=YPC_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16095;old_locus_tag=YPC_3580 NC_017265.1 Protein Homology CDS 3447792 3448523 . - 0 ID=cds3123;Parent=gene3210;Dbxref=Genbank:WP_002209471.1;Name=WP_002209471.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209471.1;transl_table=11 NC_017265.1 RefSeq gene 3448525 3449502 . - . ID=gene3211;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YPC_RS16100;old_locus_tag=YPC_3581 NC_017265.1 Protein Homology CDS 3448525 3449502 . - 0 ID=cds3124;Parent=gene3211;Dbxref=Genbank:WP_002209470.1;Name=WP_002209470.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=ribosomal large subunit pseudouridine synthase D;protein_id=WP_002209470.1;transl_table=11 NC_017265.1 RefSeq gene 3449638 3450369 . + . ID=gene3212;Name=YPC_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16105;old_locus_tag=YPC_3582 NC_017265.1 Protein Homology CDS 3449638 3450369 . + 0 ID=cds3125;Parent=gene3212;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11 NC_017265.1 RefSeq gene 3450724 3451086 . + . ID=gene3213;Name=YPC_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16110;old_locus_tag=YPC_3583 NC_017265.1 Protein Homology CDS 3450724 3451086 . + 0 ID=cds3126;Parent=gene3213;Dbxref=Genbank:WP_002209468.1;Name=WP_002209468.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_002209468.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3451308 3452027 . + . ID=id278;gbkey=repeat_region NC_017265.1 RefSeq gene 3451417 3451875 . - . ID=gene3214;Name=YPC_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16115;old_locus_tag=YPC_3584 NC_017265.1 Protein Homology CDS 3451417 3451875 . - 0 ID=cds3127;Parent=gene3214;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3451865 3452023 . - . ID=gene3215;Name=YPC_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16120 NC_017265.1 Protein Homology CDS 3451865 3452023 . - 0 ID=cds3128;Parent=gene3215;Dbxref=Genbank:WP_002217797.1;Name=WP_002217797.1;gbkey=CDS;product=invasin;protein_id=WP_002217797.1;transl_table=11 NC_017265.1 RefSeq gene 3452158 3452953 . + . ID=gene3216;Name=pheA;end_range=3452953,.;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=YPC_RS16125;old_locus_tag=YPC_3586;partial=true;pseudo=true NC_017265.1 Protein Homology CDS 3452158 3452953 . + 0 ID=cds3129;Parent=gene3216;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;end_range=3452953,.;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=pheA;partial=true;product=chorismate mutase;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 3452914 3454873 . + . ID=id279;gbkey=repeat_region;gene=pheA NC_017265.1 RefSeq gene 3453002 3454024 . + . ID=gene3217;Name=YPC_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16130;old_locus_tag=YPC_3587 NC_017265.1 Protein Homology CDS 3453002 3454024 . + 0 ID=cds3130;Parent=gene3217;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 3454024 3454803 . + . ID=gene3218;Name=YPC_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16135;old_locus_tag=YPC_3588 NC_017265.1 Protein Homology CDS 3454024 3454803 . + 0 ID=cds3131;Parent=gene3218;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 3454855 3455274 . + . ID=gene3219;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=YPC_RS16140;old_locus_tag=YPC_3589;partial=true;pseudo=true;start_range=.,3454855 NC_017265.1 Protein Homology CDS 3454855 3455274 . + 0 ID=cds3132;Parent=gene3219;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;exception=unextendable partial coding region;gbkey=CDS;gene=pheA;partial=true;product=chorismate mutase;pseudo=true;start_range=.,3454855;transl_table=11 NC_017265.1 RefSeq gene 3455379 3456500 . - . ID=gene3220;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YPC_RS16145;old_locus_tag=YPC_3590 NC_017265.1 Protein Homology CDS 3455379 3456500 . - 0 ID=cds3133;Parent=gene3220;Dbxref=Genbank:WP_002209465.1;Name=WP_002209465.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_002209465.1;transl_table=11 NC_017265.1 RefSeq gene 3456513 3457583 . - . ID=gene3221;Name=YPC_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16150;old_locus_tag=YPC_3591 NC_017265.1 Protein Homology CDS 3456513 3457583 . - 0 ID=cds3134;Parent=gene3221;Dbxref=Genbank:WP_002228238.1;Name=WP_002228238.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002228238.1;transl_table=11 NC_017265.1 RefSeq gene 3457816 3458532 . + . ID=gene3222;Name=YPC_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16155;old_locus_tag=YPC_3592 NC_017265.1 Protein Homology CDS 3457816 3458532 . + 0 ID=cds3135;Parent=gene3222;Dbxref=Genbank:WP_002223245.1;Name=WP_002223245.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002223245.1;transl_table=11 NC_017265.1 RefSeq gene 3459024 3459641 . + . ID=gene3223;Name=YPC_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16160;old_locus_tag=YPC_3593 NC_017265.1 Protein Homology CDS 3459024 3459641 . + 0 ID=cds3136;Parent=gene3223;Dbxref=Genbank:WP_002217484.1;Name=WP_002217484.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217484.1;transl_table=11 NC_017265.1 RefSeq gene 3459710 3460021 . + . ID=gene3224;Name=YPC_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16165;old_locus_tag=YPC_3594 NC_017265.1 Protein Homology CDS 3459710 3460021 . + 0 ID=cds3137;Parent=gene3224;Dbxref=Genbank:WP_002228328.1;Name=WP_002228328.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228328.1;transl_table=11 NC_017265.1 RefSeq gene 3460009 3460305 . + . ID=gene3225;Name=YPC_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16170;old_locus_tag=YPC_3595 NC_017265.1 Protein Homology CDS 3460009 3460305 . + 0 ID=cds3138;Parent=gene3225;Dbxref=Genbank:WP_002217480.1;Name=WP_002217480.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217480.1;transl_table=11 NC_017265.1 RefSeq gene 3460628 3461395 . + . ID=gene3226;Name=YPC_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16175;old_locus_tag=YPC_3596 NC_017265.1 Protein Homology CDS 3460628 3461395 . + 0 ID=cds3139;Parent=gene3226;Dbxref=Genbank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209462.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3461586 3462307 . + . ID=id280;gbkey=repeat_region NC_017265.1 RefSeq gene 3461698 3462156 . - . ID=gene3227;Name=YPC_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16180;old_locus_tag=YPC_3597 NC_017265.1 Protein Homology CDS 3461698 3462156 . - 0 ID=cds3140;Parent=gene3227;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3462146 3462298 . - . ID=gene3228;Name=YPC_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16185 NC_017265.1 Protein Homology CDS 3462146 3462298 . - 0 ID=cds3141;Parent=gene3228;Dbxref=Genbank:WP_042468601.1;Name=WP_042468601.1;gbkey=CDS;product=transposase;protein_id=WP_042468601.1;transl_table=11 NC_017265.1 RefSeq gene 3462367 3462714 . - . ID=gene3229;Name=YPC_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16190;old_locus_tag=YPC_3600 NC_017265.1 Protein Homology CDS 3462367 3462714 . - 0 ID=cds3142;Parent=gene3229;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NC_017265.1 RefSeq gene 3462795 3463535 . - . ID=gene3230;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YPC_RS16195;old_locus_tag=YPC_3601 NC_017265.1 Protein Homology CDS 3462795 3463535 . - 0 ID=cds3143;Parent=gene3230;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11 NC_017265.1 RefSeq gene 3463574 3464122 . - . ID=gene3231;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YPC_RS16200;old_locus_tag=YPC_3602 NC_017265.1 Protein Homology CDS 3463574 3464122 . - 0 ID=cds3144;Parent=gene3231;Dbxref=Genbank:WP_002209459.1;Name=WP_002209459.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_002209459.1;transl_table=11 NC_017265.1 RefSeq gene 3464144 3464392 . - . ID=gene3232;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YPC_RS16205;old_locus_tag=YPC_3603 NC_017265.1 Protein Homology CDS 3464144 3464392 . - 0 ID=cds3145;Parent=gene3232;Dbxref=Genbank:WP_015683726.1;Name=WP_015683726.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_015683726.1;transl_table=11 NC_017265.1 RefSeq gene 3464620 3465981 . - . ID=gene3233;Name=YPC_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16210;old_locus_tag=YPC_3605 NC_017265.1 Protein Homology CDS 3464620 3465981 . - 0 ID=cds3146;Parent=gene3233;Dbxref=Genbank:WP_002209456.1;Name=WP_002209456.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_002209456.1;transl_table=11 NC_017265.1 RefSeq gene 3466147 3466938 . + . ID=gene3234;Name=YPC_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16215;old_locus_tag=YPC_3606 NC_017265.1 Protein Homology CDS 3466147 3466938 . + 0 ID=cds3147;Parent=gene3234;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11 NC_017265.1 RefSeq gene 3467007 3468290 . + . ID=gene3235;Name=YPC_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16220;old_locus_tag=YPC_3607 NC_017265.1 Protein Homology CDS 3467007 3468290 . + 0 ID=cds3148;Parent=gene3235;Dbxref=Genbank:WP_002209454.1;Name=WP_002209454.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209454.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3468316 3469039 . + . ID=id281;gbkey=repeat_region NC_017265.1 RefSeq gene 3468428 3468886 . - . ID=gene3236;Name=YPC_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16225;old_locus_tag=YPC_3608 NC_017265.1 Protein Homology CDS 3468428 3468886 . - 0 ID=cds3149;Parent=gene3236;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 3468876 3469049 . - . ID=gene3237;Name=YPC_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16230 NC_017265.1 Protein Homology CDS 3468876 3469049 . - 0 ID=cds3150;Parent=gene3237;Dbxref=Genbank:WP_029787775.1;Name=WP_029787775.1;gbkey=CDS;product=transposase;protein_id=WP_029787775.1;transl_table=11 NC_017265.1 RefSeq gene 3469090 3469605 . - . ID=gene3238;Name=YPC_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16235;old_locus_tag=YPC_3610 NC_017265.1 Protein Homology CDS 3469090 3469605 . - 0 ID=cds3151;Parent=gene3238;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NC_017265.1 RefSeq gene 3469695 3469766 . + . ID=gene3239;Name=micA;gbkey=Gene;gene=micA;gene_biotype=antisense_RNA;locus_tag=YPC_RS22035 NC_017265.1 RefSeq ncRNA 3469695 3469766 . + . ID=rna82;Parent=gene3239;Dbxref=ASAP:BBE-0004887,ASAP:BBE-0004887 ERIC;gbkey=ncRNA;gene=micA;ncrna_class=antisense_RNA;product=MicA regulatory antisense RNA NC_017265.1 RefSeq exon 3469695 3469766 . + . ID=id282;Parent=rna82;Dbxref=ASAP:BBE-0004887,ASAP:BBE-0004887 ERIC;gbkey=ncRNA;gene=micA;ncrna_class=antisense_RNA;product=MicA regulatory antisense RNA NC_017265.1 RefSeq gene 3469772 3471331 . - . ID=gene3240;Name=YPC_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16240;old_locus_tag=YPC_3612 NC_017265.1 Protein Homology CDS 3469772 3471331 . - 0 ID=cds3152;Parent=gene3240;Dbxref=Genbank:WP_002228236.1;Name=WP_002228236.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_002228236.1;transl_table=11 NC_017265.1 RefSeq gene 3471414 3471842 . - . ID=gene3241;Name=YPC_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16245;old_locus_tag=YPC_3613 NC_017265.1 Protein Homology CDS 3471414 3471842 . - 0 ID=cds3153;Parent=gene3241;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11 NC_017265.1 RefSeq gene 3471839 3472405 . - . ID=gene3242;Name=YPC_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16250;old_locus_tag=YPC_3614 NC_017265.1 Protein Homology CDS 3471839 3472405 . - 0 ID=cds3154;Parent=gene3242;Dbxref=Genbank:WP_002209450.1;Name=WP_002209450.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3472620 3473017 . + . ID=id283;gbkey=repeat_region NC_017265.1 RefSeq gene 3473000 3473076 . - . ID=gene3243;Name=YPC_RS16255;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS16255;old_locus_tag=YPC_3615 NC_017265.1 tRNAscan-SE tRNA 3473000 3473076 . - . ID=rna83;Parent=gene3243;anticodon=(pos:complement(3473040..3473042));gbkey=tRNA;product=tRNA-Arg NC_017265.1 tRNAscan-SE exon 3473000 3473076 . - . ID=id284;Parent=rna83;anticodon=(pos:complement(3473040..3473042));gbkey=tRNA;product=tRNA-Arg NC_017265.1 RefSeq gene 3473156 3473232 . - . ID=gene3244;Name=YPC_RS16260;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS16260;old_locus_tag=YPC_3616 NC_017265.1 tRNAscan-SE tRNA 3473156 3473232 . - . ID=rna84;Parent=gene3244;anticodon=(pos:complement(3473196..3473198));gbkey=tRNA;product=tRNA-Arg NC_017265.1 tRNAscan-SE exon 3473156 3473232 . - . ID=id285;Parent=rna84;anticodon=(pos:complement(3473196..3473198));gbkey=tRNA;product=tRNA-Arg NC_017265.1 RefSeq gene 3473290 3473366 . - . ID=gene3245;Name=YPC_RS16265;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS16265;old_locus_tag=YPC_3617 NC_017265.1 tRNAscan-SE tRNA 3473290 3473366 . - . ID=rna85;Parent=gene3245;anticodon=(pos:complement(3473330..3473332));gbkey=tRNA;product=tRNA-Arg NC_017265.1 tRNAscan-SE exon 3473290 3473366 . - . ID=id286;Parent=rna85;anticodon=(pos:complement(3473330..3473332));gbkey=tRNA;product=tRNA-Arg NC_017265.1 RefSeq gene 3473375 3473467 . - . ID=gene3246;Name=YPC_RS16270;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS16270;old_locus_tag=YPC_3618 NC_017265.1 tRNAscan-SE tRNA 3473375 3473467 . - . ID=rna86;Parent=gene3246;anticodon=(pos:complement(3473431..3473433));gbkey=tRNA;product=tRNA-Ser NC_017265.1 tRNAscan-SE exon 3473375 3473467 . - . ID=id287;Parent=rna86;anticodon=(pos:complement(3473431..3473433));gbkey=tRNA;product=tRNA-Ser NC_017265.1 RefSeq gene 3473830 3474015 . - . ID=gene3247;Name=YPC_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16275;old_locus_tag=YPC_3619 NC_017265.1 Protein Homology CDS 3473830 3474015 . - 0 ID=cds3155;Parent=gene3247;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11 NC_017265.1 RefSeq gene 3474265 3476892 . - . ID=gene3248;Name=YPC_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16280;old_locus_tag=YPC_3620 NC_017265.1 Protein Homology CDS 3474265 3476892 . - 0 ID=cds3156;Parent=gene3248;Dbxref=Genbank:WP_002209448.1;Name=WP_002209448.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_002209448.1;transl_table=11 NC_017265.1 RefSeq gene 3477032 3477595 . - . ID=gene3249;Name=YPC_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16285;old_locus_tag=YPC_3621 NC_017265.1 Protein Homology CDS 3477032 3477595 . - 0 ID=cds3157;Parent=gene3249;Dbxref=Genbank:WP_002209447.1;Name=WP_002209447.1;gbkey=CDS;product=regulatory protein RecX;protein_id=WP_002209447.1;transl_table=11 NC_017265.1 RefSeq gene 3477733 3478803 . - . ID=gene3250;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YPC_RS16290;old_locus_tag=YPC_3622 NC_017265.1 Protein Homology CDS 3477733 3478803 . - 0 ID=cds3158;Parent=gene3250;Dbxref=Genbank:WP_002209446.1;Name=WP_002209446.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_002209446.1;transl_table=11 NC_017265.1 RefSeq gene 3478917 3479405 . - . ID=gene3251;Name=YPC_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16295;old_locus_tag=YPC_3623 NC_017265.1 Protein Homology CDS 3478917 3479405 . - 0 ID=cds3159;Parent=gene3251;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11 NC_017265.1 RefSeq gene 3479722 3481062 . + . ID=gene3252;Name=YPC_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16300;old_locus_tag=YPC_3624 NC_017265.1 Protein Homology CDS 3479722 3481062 . + 0 ID=cds3160;Parent=gene3252;Dbxref=Genbank:WP_002209444.1;Name=WP_002209444.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11 NC_017265.1 RefSeq gene 3481310 3482254 . + . ID=gene3253;Name=YPC_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16305;old_locus_tag=YPC_3625 NC_017265.1 Protein Homology CDS 3481310 3482254 . + 0 ID=cds3161;Parent=gene3253;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NC_017265.1 RefSeq gene 3482476 3483900 . - . ID=gene3254;Name=YPC_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16310;old_locus_tag=YPC_3627 NC_017265.1 Protein Homology CDS 3482476 3483900 . - 0 ID=cds3162;Parent=gene3254;Dbxref=Genbank:WP_015683727.1;Name=WP_015683727.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_015683727.1;transl_table=11 NC_017265.1 RefSeq gene 3483921 3485408 . - . ID=gene3255;Name=YPC_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16315;old_locus_tag=YPC_3628 NC_017265.1 Protein Homology CDS 3483921 3485408 . - 0 ID=cds3163;Parent=gene3255;Dbxref=Genbank:WP_002209440.1;Name=WP_002209440.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_002209440.1;transl_table=11 NC_017265.1 RefSeq gene 3485411 3486355 . - . ID=gene3256;Name=YPC_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16320 NC_017265.1 Protein Homology CDS 3485411 3486355 . - 0 ID=cds3164;Parent=gene3256;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11 NC_017265.1 RefSeq gene 3486348 3487178 . - . ID=gene3257;Name=YPC_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16325 NC_017265.1 Protein Homology CDS 3486348 3487178 . - 0 ID=cds3165;Parent=gene3257;Dbxref=Genbank:WP_002209438.1;Name=WP_002209438.1;gbkey=CDS;product=transketolase;protein_id=WP_002209438.1;transl_table=11 NC_017265.1 RefSeq gene 3487429 3488571 . - . ID=gene3258;Name=YPC_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16330;old_locus_tag=YPC_3631 NC_017265.1 Protein Homology CDS 3487429 3488571 . - 0 ID=cds3166;Parent=gene3258;Dbxref=Genbank:WP_002354764.1;Name=WP_002354764.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002354764.1;transl_table=11 NC_017265.1 RefSeq gene 3488571 3490094 . - . ID=gene3259;Name=YPC_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16335;old_locus_tag=YPC_3632 NC_017265.1 Protein Homology CDS 3488571 3490094 . - 0 ID=cds3167;Parent=gene3259;Dbxref=Genbank:WP_002209436.1;Name=WP_002209436.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209436.1;transl_table=11 NC_017265.1 RefSeq gene 3490094 3490711 . - . ID=gene3260;Name=YPC_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16340;old_locus_tag=YPC_3633 NC_017265.1 Protein Homology CDS 3490094 3490711 . - 0 ID=cds3168;Parent=gene3260;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11 NC_017265.1 RefSeq gene 3490804 3491745 . - . ID=gene3261;Name=YPC_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16345;old_locus_tag=YPC_3634 NC_017265.1 Protein Homology CDS 3490804 3491745 . - 0 ID=cds3169;Parent=gene3261;Dbxref=Genbank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11 NC_017265.1 RefSeq gene 3492281 3494494 . + . ID=gene3262;Name=YPC_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16350;old_locus_tag=YPC_3635 NC_017265.1 Protein Homology CDS 3492281 3494494 . + 0 ID=cds3170;Parent=gene3262;Dbxref=Genbank:WP_002209433.1;Name=WP_002209433.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_002209433.1;transl_table=11 NC_017265.1 RefSeq gene 3494571 3494954 . + . ID=gene3263;Name=YPC_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16355;old_locus_tag=YPC_3636 NC_017265.1 Protein Homology CDS 3494571 3494954 . + 0 ID=cds3171;Parent=gene3263;Dbxref=Genbank:WP_002215101.1;Name=WP_002215101.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_002215101.1;transl_table=11 NC_017265.1 RefSeq gene 3495102 3495632 . + . ID=gene3264;Name=YPC_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16360;old_locus_tag=YPC_3637 NC_017265.1 Protein Homology CDS 3495102 3495632 . + 0 ID=cds3172;Parent=gene3264;Dbxref=Genbank:WP_002215100.1;Name=WP_002215100.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome b561;protein_id=WP_002215100.1;transl_table=11 NC_017265.1 RefSeq gene 3495889 3496599 . - . ID=gene3265;Name=YPC_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16365;old_locus_tag=YPC_3639 NC_017265.1 Protein Homology CDS 3495889 3496599 . - 0 ID=cds3173;Parent=gene3265;Dbxref=Genbank:WP_002209430.1;Name=WP_002209430.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_002209430.1;transl_table=11 NC_017265.1 RefSeq gene 3496745 3497605 . - . ID=gene3266;Name=YPC_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16370;old_locus_tag=YPC_3640 NC_017265.1 Protein Homology CDS 3496745 3497605 . - 0 ID=cds3174;Parent=gene3266;Dbxref=Genbank:WP_002209429.1;Name=WP_002209429.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_002209429.1;transl_table=11 NC_017265.1 RefSeq gene 3497607 3498224 . - . ID=gene3267;Name=YPC_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16375;old_locus_tag=YPC_3641 NC_017265.1 Protein Homology CDS 3497607 3498224 . - 0 ID=cds3175;Parent=gene3267;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11 NC_017265.1 RefSeq gene 3498236 3500686 . - . ID=gene3268;Name=YPC_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16380;old_locus_tag=YPC_3642 NC_017265.1 Protein Homology CDS 3498236 3500686 . - 0 ID=cds3176;Parent=gene3268;Dbxref=Genbank:WP_002209427.1;Name=WP_002209427.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002209427.1;transl_table=11 NC_017265.1 RefSeq gene 3501149 3501844 . - . ID=gene3269;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPC_RS16385;old_locus_tag=YPC_3643 NC_017265.1 Protein Homology CDS 3501149 3501844 . - 0 ID=cds3177;Parent=gene3269;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NC_017265.1 RefSeq gene 3502547 3503356 . + . ID=gene3270;Name=YPC_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16390;old_locus_tag=YPC_3644 NC_017265.1 Protein Homology CDS 3502547 3503356 . + 0 ID=cds3178;Parent=gene3270;Dbxref=Genbank:WP_002209424.1;Name=WP_002209424.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209424.1;transl_table=11 NC_017265.1 RefSeq gene 3503517 3504521 . + . ID=gene3271;Name=YPC_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16395;old_locus_tag=YPC_3645 NC_017265.1 Protein Homology CDS 3503517 3504521 . + 0 ID=cds3179;Parent=gene3271;Dbxref=Genbank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002216011.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3504623 3505340 . + . ID=id288;gbkey=repeat_region NC_017265.1 RefSeq gene 3504772 3505230 . + . ID=gene3272;Name=YPC_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16400;old_locus_tag=YPC_3647 NC_017265.1 Protein Homology CDS 3504772 3505230 . + 0 ID=cds3180;Parent=gene3272;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3505381 3506895 . + . ID=gene3273;Name=YPC_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16405;old_locus_tag=YPC_3648 NC_017265.1 Protein Homology CDS 3505381 3506895 . + 0 ID=cds3181;Parent=gene3273;Dbxref=Genbank:WP_002209422.1;Name=WP_002209422.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209422.1;transl_table=11 NC_017265.1 RefSeq gene 3506888 3507877 . + . ID=gene3274;Name=YPC_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16410;old_locus_tag=YPC_3649 NC_017265.1 Protein Homology CDS 3506888 3507877 . + 0 ID=cds3182;Parent=gene3274;Dbxref=Genbank:WP_002209421.1;Name=WP_002209421.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209421.1;transl_table=11 NC_017265.1 RefSeq gene 3507890 3508927 . + . ID=gene3275;Name=YPC_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16415;old_locus_tag=YPC_3650 NC_017265.1 Protein Homology CDS 3507890 3508927 . + 0 ID=cds3183;Parent=gene3275;Dbxref=Genbank:WP_002216010.1;Name=WP_002216010.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002216010.1;transl_table=11 NC_017265.1 RefSeq gene 3509133 3510014 . + . ID=gene3276;Name=YPC_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16420;old_locus_tag=YPC_3651 NC_017265.1 Protein Homology CDS 3509133 3510014 . + 0 ID=cds3184;Parent=gene3276;Dbxref=Genbank:WP_002209420.1;Name=WP_002209420.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_002209420.1;transl_table=11 NC_017265.1 RefSeq gene 3510025 3511521 . + . ID=gene3277;Name=YPC_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16425;old_locus_tag=YPC_3652 NC_017265.1 Protein Homology CDS 3510025 3511521 . + 0 ID=cds3185;Parent=gene3277;Dbxref=Genbank:WP_002209419.1;Name=WP_002209419.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_002209419.1;transl_table=11 NC_017265.1 RefSeq gene 3511919 3513562 . + . ID=gene3278;Name=YPC_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16430;old_locus_tag=YPC_3653 NC_017265.1 Protein Homology CDS 3511919 3513562 . + 0 ID=cds3186;Parent=gene3278;Dbxref=Genbank:WP_002209418.1;Name=WP_002209418.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_002209418.1;transl_table=11 NC_017265.1 RefSeq gene 3513745 3513996 . + . ID=gene3279;Name=YPC_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16435;old_locus_tag=YPC_3654 NC_017265.1 Protein Homology CDS 3513745 3513996 . + 0 ID=cds3187;Parent=gene3279;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11 NC_017265.1 RefSeq gene 3513993 3514778 . + . ID=gene3280;Name=YPC_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16440;old_locus_tag=YPC_3655 NC_017265.1 Protein Homology CDS 3513993 3514778 . + 0 ID=cds3188;Parent=gene3280;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11 NC_017265.1 RefSeq gene 3514788 3514973 . - . ID=gene3281;Name=YPC_RS16445;gbkey=Gene;gene_biotype=other;locus_tag=YPC_RS16445;old_locus_tag=YPC_3656 NC_017265.1 RefSeq gene 3515136 3516323 . - . ID=gene3282;Name=YPC_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16450;old_locus_tag=YPC_3657 NC_017265.1 Protein Homology CDS 3515136 3516323 . - 0 ID=cds3189;Parent=gene3282;Dbxref=Genbank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002209414.1;transl_table=11 NC_017265.1 RefSeq gene 3516756 3518852 . - . ID=gene3283;Name=YPC_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16455;old_locus_tag=YPC_3658 NC_017265.1 Protein Homology CDS 3516756 3518852 . - 0 ID=cds3190;Parent=gene3283;Dbxref=Genbank:WP_002223222.1;Name=WP_002223222.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002223222.1;transl_table=11 NC_017265.1 RefSeq gene 3519514 3520893 . + . ID=gene3284;Name=YPC_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16460;old_locus_tag=YPC_3660 NC_017265.1 Protein Homology CDS 3519514 3520893 . + 0 ID=cds3191;Parent=gene3284;Dbxref=Genbank:WP_002209412.1;Name=WP_002209412.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209412.1;transl_table=11 NC_017265.1 RefSeq gene 3520964 3521728 . + . ID=gene3285;Name=YPC_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16465;old_locus_tag=YPC_3661 NC_017265.1 Protein Homology CDS 3520964 3521728 . + 0 ID=cds3192;Parent=gene3285;Dbxref=Genbank:WP_002209411.1;Name=WP_002209411.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002209411.1;transl_table=11 NC_017265.1 RefSeq gene 3522152 3522355 . + . ID=gene3286;Name=YPC_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16470;old_locus_tag=YPC_3662 NC_017265.1 Protein Homology CDS 3522152 3522355 . + 0 ID=cds3193;Parent=gene3286;Dbxref=Genbank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NC_017265.1 RefSeq gene 3522566 3522829 . + . ID=gene3287;Name=YPC_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16475;old_locus_tag=YPC_3663 NC_017265.1 Protein Homology CDS 3522566 3522829 . + 0 ID=cds3194;Parent=gene3287;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11 NC_017265.1 RefSeq gene 3523076 3523417 . + . ID=gene3288;Name=YPC_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16480;old_locus_tag=YPC_3664 NC_017265.1 Protein Homology CDS 3523076 3523417 . + 0 ID=cds3195;Parent=gene3288;Dbxref=Genbank:WP_002209409.1;Name=WP_002209409.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_002209409.1;transl_table=11 NC_017265.1 RefSeq gene 3523502 3524791 . + . ID=gene3289;Name=YPC_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16485;old_locus_tag=YPC_3665 NC_017265.1 Protein Homology CDS 3523502 3524791 . + 0 ID=cds3196;Parent=gene3289;Dbxref=Genbank:WP_002209408.1;Name=WP_002209408.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_002209408.1;transl_table=11 NC_017265.1 RefSeq gene 3525346 3526317 . + . ID=gene3290;Name=YPC_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16490;old_locus_tag=YPC_3666 NC_017265.1 Protein Homology CDS 3525346 3526317 . + 0 ID=cds3197;Parent=gene3290;Dbxref=Genbank:WP_002209407.1;Name=WP_002209407.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NC_017265.1 RefSeq gene 3526438 3527112 . - . ID=gene3291;Name=YPC_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16495;old_locus_tag=YPC_3667 NC_017265.1 Protein Homology CDS 3526438 3527112 . - 0 ID=cds3198;Parent=gene3291;Dbxref=Genbank:WP_002209406.1;Name=WP_002209406.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002209406.1;transl_table=11 NC_017265.1 RefSeq gene 3527119 3528120 . - . ID=gene3292;Name=YPC_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16500;old_locus_tag=YPC_3668 NC_017265.1 Protein Homology CDS 3527119 3528120 . - 0 ID=cds3199;Parent=gene3292;Dbxref=Genbank:WP_002228229.1;Name=WP_002228229.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002228229.1;transl_table=11 NC_017265.1 RefSeq gene 3528207 3528977 . - . ID=gene3293;Name=YPC_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16505;old_locus_tag=YPC_3669 NC_017265.1 Protein Homology CDS 3528207 3528977 . - 0 ID=cds3200;Parent=gene3293;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11 NC_017265.1 RefSeq gene 3529041 3530156 . - . ID=gene3294;Name=YPC_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16510;old_locus_tag=YPC_3670 NC_017265.1 Protein Homology CDS 3529041 3530156 . - 0 ID=cds3201;Parent=gene3294;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NC_017265.1 RefSeq gene 3530639 3531094 . + . ID=gene3295;Name=YPC_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16515;old_locus_tag=YPC_3671 NC_017265.1 Protein Homology CDS 3530639 3531094 . + 0 ID=cds3202;Parent=gene3295;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11 NC_017265.1 RefSeq gene 3531257 3531391 . - . ID=gene3296;Name=YPC_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16520;old_locus_tag=YPC_3672 NC_017265.1 Protein Homology CDS 3531257 3531391 . - 0 ID=cds3203;Parent=gene3296;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11 NC_017265.1 RefSeq gene 3531888 3534443 . + . ID=gene3297;Name=YPC_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16525;old_locus_tag=YPC_3673 NC_017265.1 Protein Homology CDS 3531888 3534443 . + 0 ID=cds3204;Parent=gene3297;Dbxref=Genbank:WP_002209399.1;Name=WP_002209399.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_002209399.1;transl_table=11 NC_017265.1 RefSeq gene 3534811 3535809 . - . ID=gene3298;Name=YPC_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16530;old_locus_tag=YPC_3674 NC_017265.1 Protein Homology CDS 3534811 3535809 . - 0 ID=cds3205;Parent=gene3298;Dbxref=Genbank:WP_002209397.1;Name=WP_002209397.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_002209397.1;transl_table=11 NC_017265.1 RefSeq gene 3535864 3536847 . - . ID=gene3299;Name=YPC_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16535;old_locus_tag=YPC_3675 NC_017265.1 Protein Homology CDS 3535864 3536847 . - 0 ID=cds3206;Parent=gene3299;Dbxref=Genbank:WP_002209396.1;Name=WP_002209396.1;gbkey=CDS;product=lipoprotein nlpD;protein_id=WP_002209396.1;transl_table=11 NC_017265.1 RefSeq gene 3536969 3537595 . - . ID=gene3300;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YPC_RS16540;old_locus_tag=YPC_3676 NC_017265.1 Protein Homology CDS 3536969 3537595 . - 0 ID=cds3207;Parent=gene3300;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NC_017265.1 RefSeq gene 3537589 3538353 . - . ID=gene3301;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YPC_RS16545;old_locus_tag=YPC_3677 NC_017265.1 Protein Homology CDS 3537589 3538353 . - 0 ID=cds3208;Parent=gene3301;Dbxref=Genbank:WP_002209394.1;Name=WP_002209394.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_002209394.1;transl_table=11 NC_017265.1 RefSeq gene 3538331 3539380 . - . ID=gene3302;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=YPC_RS16550;old_locus_tag=YPC_3678 NC_017265.1 Protein Homology CDS 3538331 3539380 . - 0 ID=cds3209;Parent=gene3302;Dbxref=Genbank:WP_002209393.1;Name=WP_002209393.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_002209393.1;transl_table=11 NC_017265.1 RefSeq gene 3539391 3539879 . - . ID=gene3303;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YPC_RS16555;old_locus_tag=YPC_3679 NC_017265.1 Protein Homology CDS 3539391 3539879 . - 0 ID=cds3210;Parent=gene3303;Dbxref=Genbank:WP_002209392.1;Name=WP_002209392.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NC_017265.1 RefSeq gene 3540018 3540743 . - . ID=gene3304;Name=YPC_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16560;old_locus_tag=YPC_3680 NC_017265.1 Protein Homology CDS 3540018 3540743 . - 0 ID=cds3211;Parent=gene3304;Dbxref=Genbank:WP_002209391.1;Name=WP_002209391.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_002209391.1;transl_table=11 NC_017265.1 RefSeq gene 3540747 3541067 . - . ID=gene3305;Name=YPC_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16565;old_locus_tag=YPC_3681 NC_017265.1 Protein Homology CDS 3540747 3541067 . - 0 ID=cds3212;Parent=gene3305;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NC_017265.1 RefSeq gene 3541379 3541696 . - . ID=gene3306;Name=YPC_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16570;old_locus_tag=YPC_3682 NC_017265.1 Protein Homology CDS 3541379 3541696 . - 0 ID=cds3213;Parent=gene3306;Dbxref=Genbank:WP_015683729.1;Name=WP_015683729.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683729.1;transl_table=11 NC_017265.1 RefSeq gene 3541887 3542528 . - . ID=gene3307;Name=YPC_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16575;old_locus_tag=YPC_3683 NC_017265.1 Protein Homology CDS 3541887 3542528 . - 0 ID=cds3214;Parent=gene3307;Dbxref=Genbank:WP_002209388.1;Name=WP_002209388.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NC_017265.1 RefSeq gene 3542530 3543966 . - . ID=gene3308;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YPC_RS16580;old_locus_tag=YPC_3684 NC_017265.1 Protein Homology CDS 3542530 3543966 . - 0 ID=cds3215;Parent=gene3308;Dbxref=Genbank:WP_002228227.1;Name=WP_002228227.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_002228227.1;transl_table=11 NC_017265.1 RefSeq gene 3544059 3544967 . - . ID=gene3309;Name=YPC_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16585;old_locus_tag=YPC_3685 NC_017265.1 Protein Homology CDS 3544059 3544967 . - 0 ID=cds3216;Parent=gene3309;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11 NC_017265.1 RefSeq gene 3544978 3546396 . - . ID=gene3310;Name=YPC_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16590;old_locus_tag=YPC_3686 NC_017265.1 Protein Homology CDS 3544978 3546396 . - 0 ID=cds3217;Parent=gene3310;Dbxref=Genbank:WP_002209385.1;Name=WP_002209385.1;gbkey=CDS;product=sirohydrochlorin ferrochelatase;protein_id=WP_002209385.1;transl_table=11 NC_017265.1 RefSeq gene 3546698 3546895 . - . ID=gene3311;Name=YPC_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16595 NC_017265.1 Protein Homology CDS 3546698 3546895 . - 0 ID=cds3218;Parent=gene3311;Dbxref=Genbank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;product=membrane protein;protein_id=WP_002222261.1;transl_table=11 NC_017265.1 RefSeq gene 3546988 3547188 . + . ID=gene3312;Name=YPC_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16600;old_locus_tag=YPC_3688 NC_017265.1 Protein Homology CDS 3546988 3547188 . + 0 ID=cds3219;Parent=gene3312;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11 NC_017265.1 RefSeq gene 3547363 3547770 . + . ID=gene3313;Name=YPC_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16605;old_locus_tag=YPC_3689 NC_017265.1 Protein Homology CDS 3547363 3547770 . + 0 ID=cds3220;Parent=gene3313;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3547798 3547977 . + . ID=id289;gbkey=repeat_region NC_017265.1 RefSeq gene 3548013 3548739 . - . ID=gene3314;Name=YPC_RS16610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS16610;pseudo=true NC_017265.1 Protein Homology CDS 3548013 3548739 . - 0 ID=cds3221;Parent=gene3314;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3548736 3550466 . - . ID=gene3315;Name=YPC_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16615;old_locus_tag=YPC_3693 NC_017265.1 Protein Homology CDS 3548736 3550466 . - 0 ID=cds3222;Parent=gene3315;Dbxref=Genbank:WP_002209382.1;Name=WP_002209382.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_002209382.1;transl_table=11 NC_017265.1 RefSeq gene 3550466 3552304 . - . ID=gene3316;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YPC_RS16620;old_locus_tag=YPC_3694 NC_017265.1 Protein Homology CDS 3550466 3552304 . - 0 ID=cds3223;Parent=gene3316;Dbxref=Genbank:WP_002223202.1;Name=WP_002223202.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_002223202.1;transl_table=11 NC_017265.1 RefSeq gene 3552697 3553056 . + . ID=gene3317;Name=YPC_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16625;old_locus_tag=YPC_3695 NC_017265.1 Protein Homology CDS 3552697 3553056 . + 0 ID=cds3224;Parent=gene3317;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11 NC_017265.1 RefSeq gene 3553290 3553961 . - . ID=gene3318;Name=YPC_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16630;old_locus_tag=YPC_3696 NC_017265.1 Protein Homology CDS 3553290 3553961 . - 0 ID=cds3225;Parent=gene3318;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11 NC_017265.1 RefSeq gene 3554065 3554670 . - . ID=gene3319;Name=YPC_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16635;old_locus_tag=YPC_3699 NC_017265.1 Protein Homology CDS 3554065 3554670 . - 0 ID=cds3226;Parent=gene3319;Dbxref=Genbank:WP_002218050.1;Name=WP_002218050.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002218050.1;transl_table=11 NC_017265.1 RefSeq gene 3555042 3556337 . - . ID=gene3320;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YPC_RS16640;old_locus_tag=YPC_3700 NC_017265.1 Protein Homology CDS 3555042 3556337 . - 0 ID=cds3227;Parent=gene3320;Dbxref=Genbank:WP_002209377.1;Name=WP_002209377.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_002209377.1;transl_table=11 NC_017265.1 RefSeq gene 3556418 3558055 . - . ID=gene3321;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YPC_RS16645;old_locus_tag=YPC_3701 NC_017265.1 Protein Homology CDS 3556418 3558055 . - 0 ID=cds3228;Parent=gene3321;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11 NC_017265.1 RefSeq gene 3558267 3559109 . - . ID=gene3322;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YPC_RS16650;old_locus_tag=YPC_3702 NC_017265.1 Protein Homology CDS 3558267 3559109 . - 0 ID=cds3229;Parent=gene3322;Dbxref=Genbank:WP_002209374.1;Name=WP_002209374.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002209374.1;transl_table=11 NC_017265.1 RefSeq gene 3559116 3559274 . - . ID=gene3323;Name=YPC_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16655;old_locus_tag=YPC_3703 NC_017265.1 Protein Homology CDS 3559116 3559274 . - 0 ID=cds3230;Parent=gene3323;Dbxref=Genbank:WP_002228225.1;Name=WP_002228225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228225.1;transl_table=11 NC_017265.1 RefSeq gene 3559311 3561545 . - . ID=gene3324;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YPC_RS16660;old_locus_tag=YPC_3704 NC_017265.1 Protein Homology CDS 3559311 3561545 . - 0 ID=cds3231;Parent=gene3324;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11 NC_017265.1 RefSeq gene 3561989 3564781 . + . ID=gene3325;Name=YPC_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16665;old_locus_tag=YPC_3707 NC_017265.1 Protein Homology CDS 3561989 3564781 . + 0 ID=cds3232;Parent=gene3325;Dbxref=Genbank:WP_002209371.1;Name=WP_002209371.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002209371.1;transl_table=11 NC_017265.1 RefSeq gene 3564956 3566401 . - . ID=gene3326;Name=YPC_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16670;old_locus_tag=YPC_3708 NC_017265.1 Protein Homology CDS 3564956 3566401 . - 0 ID=cds3233;Parent=gene3326;Dbxref=Genbank:WP_002209370.1;Name=WP_002209370.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_002209370.1;transl_table=11 NC_017265.1 RefSeq gene 3566599 3568119 . - . ID=gene3327;Name=YPC_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16675;old_locus_tag=YPC_3709 NC_017265.1 Protein Homology CDS 3566599 3568119 . - 0 ID=cds3234;Parent=gene3327;Dbxref=Genbank:WP_002209369.1;Name=WP_002209369.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_002209369.1;transl_table=11 NC_017265.1 RefSeq gene 3568413 3569114 . + . ID=gene3328;Name=YPC_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16680;old_locus_tag=YPC_3710 NC_017265.1 Protein Homology CDS 3568413 3569114 . + 0 ID=cds3235;Parent=gene3328;Dbxref=Genbank:WP_002209368.1;Name=WP_002209368.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_002209368.1;transl_table=11 NC_017265.1 RefSeq gene 3569114 3569956 . + . ID=gene3329;Name=YPC_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16685;old_locus_tag=YPC_3711 NC_017265.1 Protein Homology CDS 3569114 3569956 . + 0 ID=cds3236;Parent=gene3329;Dbxref=Genbank:WP_002222100.1;Name=WP_002222100.1;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_002222100.1;transl_table=11 NC_017265.1 RefSeq gene 3569956 3570570 . + . ID=gene3330;Name=YPC_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16690;old_locus_tag=YPC_3712 NC_017265.1 Protein Homology CDS 3569956 3570570 . + 0 ID=cds3237;Parent=gene3330;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11 NC_017265.1 RefSeq gene 3570872 3571216 . - . ID=gene3331;Name=YPC_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16695;old_locus_tag=YPC_3714 NC_017265.1 Protein Homology CDS 3570872 3571216 . - 0 ID=cds3238;Parent=gene3331;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NC_017265.1 RefSeq gene 3571352 3572789 . - . ID=gene3332;Name=YPC_RS16700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS16700;pseudo=true NC_017265.1 Protein Homology CDS 3571352 3572789 . - 0 ID=cds3239;Parent=gene3332;exception=annotated by transcript or proteomic data;gbkey=CDS;product=H(+)/Cl(-) exchange transporter ClcA;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3573170 3574450 . + . ID=gene3333;Name=YPC_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16705;old_locus_tag=YPC_3717 NC_017265.1 Protein Homology CDS 3573170 3574450 . + 0 ID=cds3240;Parent=gene3333;Dbxref=Genbank:WP_002209362.1;Name=WP_002209362.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002209362.1;transl_table=11 NC_017265.1 RefSeq gene 3574824 3576821 . - . ID=gene3334;Name=YPC_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16710;old_locus_tag=YPC_3719 NC_017265.1 Protein Homology CDS 3574824 3576821 . - 0 ID=cds3241;Parent=gene3334;Dbxref=Genbank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=WP_002209361.1;transl_table=11 NC_017265.1 RefSeq gene 3576818 3577729 . - . ID=gene3335;Name=YPC_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16715;old_locus_tag=YPC_3720 NC_017265.1 Protein Homology CDS 3576818 3577729 . - 0 ID=cds3242;Parent=gene3335;Dbxref=Genbank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_002209360.1;transl_table=11 NC_017265.1 RefSeq gene 3577723 3577950 . + . ID=gene3336;Name=YPC_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16720 NC_017265.1 Protein Homology CDS 3577723 3577950 . + 0 ID=cds3243;Parent=gene3336;Dbxref=Genbank:WP_002426047.1;Name=WP_002426047.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002426047.1;transl_table=11 NC_017265.1 RefSeq gene 3577906 3578700 . - . ID=gene3337;Name=YPC_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16725;old_locus_tag=YPC_3721 NC_017265.1 Protein Homology CDS 3577906 3578700 . - 0 ID=cds3244;Parent=gene3337;Dbxref=Genbank:WP_002209359.1;Name=WP_002209359.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_002209359.1;transl_table=11 NC_017265.1 RefSeq gene 3579022 3581496 . - . ID=gene3338;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=YPC_RS16730;old_locus_tag=YPC_3722 NC_017265.1 Protein Homology CDS 3579022 3581496 . - 0 ID=cds3245;Parent=gene3338;Dbxref=Genbank:WP_002209358.1;Name=WP_002209358.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_002209358.1;transl_table=11 NC_017265.1 RefSeq gene 3581605 3584166 . - . ID=gene3339;Name=YPC_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16735;old_locus_tag=YPC_3723 NC_017265.1 Protein Homology CDS 3581605 3584166 . - 0 ID=cds3246;Parent=gene3339;Dbxref=Genbank:WP_002222096.1;Name=WP_002222096.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=RNA helicase;protein_id=WP_002222096.1;transl_table=11 NC_017265.1 RefSeq gene 3584207 3584782 . + . ID=gene3340;Name=YPC_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16740;old_locus_tag=YPC_3724 NC_017265.1 Protein Homology CDS 3584207 3584782 . + 0 ID=cds3247;Parent=gene3340;Dbxref=Genbank:WP_015683730.1;Name=WP_015683730.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_015683730.1;transl_table=11 NC_017265.1 RefSeq gene 3584895 3585632 . + . ID=gene3341;Name=YPC_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16745;old_locus_tag=YPC_3725 NC_017265.1 Protein Homology CDS 3584895 3585632 . + 0 ID=cds3248;Parent=gene3341;Dbxref=Genbank:WP_002228221.1;Name=WP_002228221.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_002228221.1;transl_table=11 NC_017265.1 RefSeq gene 3585802 3586257 . + . ID=gene3342;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YPC_RS16750;old_locus_tag=YPC_3726 NC_017265.1 Protein Homology CDS 3585802 3586257 . + 0 ID=cds3249;Parent=gene3342;Dbxref=Genbank:WP_015683731.1;Name=WP_015683731.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_015683731.1;transl_table=11 NC_017265.1 RefSeq gene 3586555 3587451 . + . ID=gene3343;Name=YPC_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16755;old_locus_tag=YPC_3727 NC_017265.1 Protein Homology CDS 3586555 3587451 . + 0 ID=cds3250;Parent=gene3343;Dbxref=Genbank:WP_042468848.1;Name=WP_042468848.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_042468848.1;transl_table=11 NC_017265.1 RefSeq gene 3587644 3589065 . + . ID=gene3344;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YPC_RS16760;old_locus_tag=YPC_3728 NC_017265.1 Protein Homology CDS 3587644 3589065 . + 0 ID=cds3251;Parent=gene3344;Dbxref=Genbank:WP_032465644.1;Name=WP_032465644.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_032465644.1;transl_table=11 NC_017265.1 RefSeq gene 3589073 3589552 . + . ID=gene3345;Name=YPC_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16765;old_locus_tag=YPC_3729 NC_017265.1 Protein Homology CDS 3589073 3589552 . + 0 ID=cds3252;Parent=gene3345;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11 NC_017265.1 RefSeq gene 3589821 3590618 . + . ID=gene3346;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YPC_RS16770;old_locus_tag=YPC_3730 NC_017265.1 Protein Homology CDS 3589821 3590618 . + 0 ID=cds3253;Parent=gene3346;Dbxref=Genbank:WP_002209349.1;Name=WP_002209349.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002209349.1;transl_table=11 NC_017265.1 RefSeq gene 3590706 3591560 . + . ID=gene3347;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YPC_RS16775;old_locus_tag=YPC_3731 NC_017265.1 Protein Homology CDS 3590706 3591560 . + 0 ID=cds3254;Parent=gene3347;Dbxref=Genbank:WP_002209348.1;Name=WP_002209348.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_002209348.1;transl_table=11 NC_017265.1 RefSeq gene 3591971 3592351 . + . ID=gene3348;Name=YPC_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16780;old_locus_tag=YPC_3732 NC_017265.1 Protein Homology CDS 3591971 3592351 . + 0 ID=cds3255;Parent=gene3348;Dbxref=Genbank:WP_002209347.1;Name=WP_002209347.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_002209347.1;transl_table=11 NC_017265.1 RefSeq gene 3592500 3593814 . - . ID=gene3349;Name=YPC_RS16785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS16785;pseudo=true NC_017265.1 Protein Homology CDS 3592500 3593814 . - 0 ID=cds3256;Parent=gene3349;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3594021 3594791 . - . ID=gene3350;Name=YPC_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16790;old_locus_tag=YPC_3735 NC_017265.1 Protein Homology CDS 3594021 3594791 . - 0 ID=cds3257;Parent=gene3350;Dbxref=Genbank:WP_002209344.1;Name=WP_002209344.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209344.1;transl_table=11 NC_017265.1 RefSeq gene 3594788 3595714 . - . ID=gene3351;Name=YPC_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16795;old_locus_tag=YPC_3736 NC_017265.1 Protein Homology CDS 3594788 3595714 . - 0 ID=cds3258;Parent=gene3351;Dbxref=Genbank:WP_002209343.1;Name=WP_002209343.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209343.1;transl_table=11 NC_017265.1 RefSeq gene 3595950 3596612 . + . ID=gene3352;Name=YPC_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16800;old_locus_tag=YPC_3737 NC_017265.1 Protein Homology CDS 3595950 3596612 . + 0 ID=cds3259;Parent=gene3352;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11 NC_017265.1 RefSeq gene 3596766 3597302 . - . ID=gene3353;Name=YPC_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16805;old_locus_tag=YPC_3738 NC_017265.1 Protein Homology CDS 3596766 3597302 . - 0 ID=cds3260;Parent=gene3353;Dbxref=Genbank:WP_002228315.1;Name=WP_002228315.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002228315.1;transl_table=11 NC_017265.1 RefSeq gene 3597522 3599123 . - . ID=gene3354;Name=YPC_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16810;old_locus_tag=YPC_3739 NC_017265.1 Protein Homology CDS 3597522 3599123 . - 0 ID=cds3261;Parent=gene3354;Dbxref=Genbank:WP_002209340.1;Name=WP_002209340.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=blue copper oxidase CueO;protein_id=WP_002209340.1;transl_table=11 NC_017265.1 RefSeq gene 3599440 3599787 . + . ID=gene3355;Name=YPC_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16815;old_locus_tag=YPC_3740 NC_017265.1 Protein Homology CDS 3599440 3599787 . + 0 ID=cds3262;Parent=gene3355;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11 NC_017265.1 RefSeq gene 3599904 3600794 . + . ID=gene3356;Name=YPC_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16820;old_locus_tag=YPC_3741 NC_017265.1 Protein Homology CDS 3599904 3600794 . + 0 ID=cds3263;Parent=gene3356;Dbxref=Genbank:WP_002209338.1;Name=WP_002209338.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_002209338.1;transl_table=11 NC_017265.1 RefSeq gene 3600872 3601666 . + . ID=gene3357;Name=YPC_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16825;old_locus_tag=YPC_3742 NC_017265.1 Protein Homology CDS 3600872 3601666 . + 0 ID=cds3264;Parent=gene3357;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11 NC_017265.1 RefSeq gene 3602104 3603011 . + . ID=gene3358;Name=YPC_RS16830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS16830;pseudo=true NC_017265.1 Protein Homology CDS 3602104 3603011 . + 0 ID=cds3265;Parent=gene3358;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aromatic amino acid transporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3603122 3603481 . - . ID=gene3359;Name=YPC_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16835;old_locus_tag=YPC_3746 NC_017265.1 Protein Homology CDS 3603122 3603481 . - 0 ID=cds3266;Parent=gene3359;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11 NC_017265.1 RefSeq gene 3603780 3606377 . - . ID=gene3360;Name=YPC_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16840;old_locus_tag=YPC_3748 NC_017265.1 Protein Homology CDS 3603780 3606377 . - 0 ID=cds3267;Parent=gene3360;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3606835 3607557 . + . ID=id290;gbkey=repeat_region NC_017265.1 RefSeq gene 3606947 3607405 . - . ID=gene3361;Name=YPC_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16845;old_locus_tag=YPC_3750 NC_017265.1 Protein Homology CDS 3606947 3607405 . - 0 ID=cds3268;Parent=gene3361;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3607395 3607550 . - . ID=gene3362;Name=YPC_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16850 NC_017265.1 Protein Homology CDS 3607395 3607550 . - 0 ID=cds3269;Parent=gene3362;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 3607648 3609072 . - . ID=gene3363;Name=YPC_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16855;old_locus_tag=YPC_3752 NC_017265.1 Protein Homology CDS 3607648 3609072 . - 0 ID=cds3270;Parent=gene3363;Dbxref=Genbank:WP_015683735.1;Name=WP_015683735.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_015683735.1;transl_table=11 NC_017265.1 RefSeq gene 3609378 3610907 . - . ID=gene3364;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YPC_RS16860;old_locus_tag=YPC_3754 NC_017265.1 Protein Homology CDS 3609378 3610907 . - 0 ID=cds3271;Parent=gene3364;Dbxref=Genbank:WP_002209330.1;Name=WP_002209330.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_002209330.1;transl_table=11 NC_017265.1 RefSeq gene 3610921 3613584 . - . ID=gene3365;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YPC_RS16865;old_locus_tag=YPC_3755 NC_017265.1 Protein Homology CDS 3610921 3613584 . - 0 ID=cds3272;Parent=gene3365;Dbxref=Genbank:WP_002209329.1;Name=WP_002209329.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_002209329.1;transl_table=11 NC_017265.1 RefSeq gene 3613780 3614544 . - . ID=gene3366;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YPC_RS16870;old_locus_tag=YPC_3756 NC_017265.1 Protein Homology CDS 3613780 3614544 . - 0 ID=cds3273;Parent=gene3366;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11 NC_017265.1 RefSeq gene 3615407 3616804 . + . ID=gene3367;Name=YPC_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16875;old_locus_tag=YPC_3757 NC_017265.1 Protein Homology CDS 3615407 3616804 . + 0 ID=cds3274;Parent=gene3367;Dbxref=Genbank:WP_002209327.1;Name=WP_002209327.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002209327.1;transl_table=11 NC_017265.1 RefSeq gene 3617237 3618092 . - . ID=gene3368;Name=YPC_RS16880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS16880;pseudo=true NC_017265.1 Protein Homology CDS 3617237 3618092 . - 0 ID=cds3275;Parent=gene3368;Note=involved in regulation of beta-lactamase%3B putative signaling protein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3618382 3618933 . - . ID=gene3369;Name=YPC_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16885;old_locus_tag=YPC_3760 NC_017265.1 Protein Homology CDS 3618382 3618933 . - 0 ID=cds3276;Parent=gene3369;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11 NC_017265.1 RefSeq gene 3619046 3619954 . + . ID=gene3370;Name=YPC_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16890;old_locus_tag=YPC_3761 NC_017265.1 Protein Homology CDS 3619046 3619954 . + 0 ID=cds3277;Parent=gene3370;Dbxref=Genbank:WP_002209324.1;Name=WP_002209324.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_002209324.1;transl_table=11 NC_017265.1 RefSeq gene 3620157 3620621 . + . ID=gene3371;Name=YPC_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16895;old_locus_tag=YPC_3762 NC_017265.1 Protein Homology CDS 3620157 3620621 . + 0 ID=cds3278;Parent=gene3371;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11 NC_017265.1 RefSeq gene 3620614 3622152 . + . ID=gene3372;Name=YPC_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16900;old_locus_tag=YPC_3763 NC_017265.1 Protein Homology CDS 3620614 3622152 . + 0 ID=cds3279;Parent=gene3372;Dbxref=Genbank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;product=transporter HofB;protein_id=WP_002216083.1;transl_table=11 NC_017265.1 RefSeq gene 3622149 3623348 . + . ID=gene3373;Name=YPC_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16905;old_locus_tag=YPC_3764 NC_017265.1 Protein Homology CDS 3622149 3623348 . + 0 ID=cds3280;Parent=gene3373;Dbxref=Genbank:WP_002209321.1;Name=WP_002209321.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_002209321.1;transl_table=11 NC_017265.1 RefSeq gene 3623783 3624826 . - . ID=gene3374;Name=YPC_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16910;old_locus_tag=YPC_3765 NC_017265.1 Protein Homology CDS 3623783 3624826 . - 0 ID=cds3281;Parent=gene3374;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NC_017265.1 RefSeq gene 3624912 3625112 . + . ID=gene3375;Name=YPC_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16915 NC_017265.1 Protein Homology CDS 3624912 3625112 . + 0 ID=cds3282;Parent=gene3375;Dbxref=Genbank:WP_002354912.1;Name=WP_002354912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354912.1;transl_table=11 NC_017265.1 RefSeq gene 3625122 3625742 . + . ID=gene3376;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YPC_RS16920;old_locus_tag=YPC_3766 NC_017265.1 Protein Homology CDS 3625122 3625742 . + 0 ID=cds3283;Parent=gene3376;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NC_017265.1 RefSeq gene 3625739 3626491 . + . ID=gene3377;Name=YPC_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16925;old_locus_tag=YPC_3767 NC_017265.1 Protein Homology CDS 3625739 3626491 . + 0 ID=cds3284;Parent=gene3377;Dbxref=Genbank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NC_017265.1 RefSeq gene 3626677 3626883 . + . ID=gene3378;Name=YPC_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16930;old_locus_tag=YPC_3768 NC_017265.1 Protein Homology CDS 3626677 3626883 . + 0 ID=cds3285;Parent=gene3378;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3626963 3629511 . + . ID=id291;gbkey=repeat_region NC_017265.1 RefSeq gene 3627073 3627585 . - . ID=gene3379;Name=YPC_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16935;old_locus_tag=YPC_3769 NC_017265.1 Protein Homology CDS 3627073 3627585 . - 0 ID=cds3286;Parent=gene3379;Dbxref=Genbank:WP_002209316.1;Name=WP_002209316.1;gbkey=CDS;product=transposase;protein_id=WP_002209316.1;transl_table=11 NC_017265.1 RefSeq gene 3627642 3628664 . + . ID=gene3380;Name=YPC_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16940;old_locus_tag=YPC_3770 NC_017265.1 Protein Homology CDS 3627642 3628664 . + 0 ID=cds3287;Parent=gene3380;Dbxref=Genbank:WP_015683713.1;Name=WP_015683713.1;gbkey=CDS;product=transposase;protein_id=WP_015683713.1;transl_table=11 NC_017265.1 RefSeq gene 3628664 3629443 . + . ID=gene3381;Name=YPC_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16945;old_locus_tag=YPC_3771 NC_017265.1 Protein Homology CDS 3628664 3629443 . + 0 ID=cds3288;Parent=gene3381;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 3629494 3630603 . - . ID=gene3382;Name=YPC_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16950;old_locus_tag=YPC_3772 NC_017265.1 Protein Homology CDS 3629494 3630603 . - 0 ID=cds3289;Parent=gene3382;Dbxref=Genbank:WP_002209315.1;Name=WP_002209315.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209315.1;transl_table=11 NC_017265.1 RefSeq gene 3630596 3632506 . - . ID=gene3383;Name=YPC_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16955;old_locus_tag=YPC_3773 NC_017265.1 Protein Homology CDS 3630596 3632506 . - 0 ID=cds3290;Parent=gene3383;Dbxref=Genbank:WP_002209314.1;Name=WP_002209314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209314.1;transl_table=11 NC_017265.1 RefSeq gene 3632660 3633919 . - . ID=gene3384;Name=YPC_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16960;old_locus_tag=YPC_3774 NC_017265.1 Protein Homology CDS 3632660 3633919 . - 0 ID=cds3291;Parent=gene3384;Dbxref=Genbank:WP_015683738.1;Name=WP_015683738.1;gbkey=CDS;product=integrase;protein_id=WP_015683738.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3633912 3634123 . + . ID=id292;gbkey=repeat_region NC_017265.1 RefSeq gene 3634118 3634202 . - . ID=gene3385;Name=YPC_RS16965;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS16965;old_locus_tag=YPC_3775 NC_017265.1 tRNAscan-SE tRNA 3634118 3634202 . - . ID=rna87;Parent=gene3385;anticodon=(pos:complement(3634166..3634168));gbkey=tRNA;product=tRNA-Leu NC_017265.1 tRNAscan-SE exon 3634118 3634202 . - . ID=id293;Parent=rna87;anticodon=(pos:complement(3634166..3634168));gbkey=tRNA;product=tRNA-Leu NC_017265.1 RefSeq gene 3634307 3635383 . - . ID=gene3386;Name=YPC_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16970 NC_017265.1 Protein Homology CDS 3634307 3635383 . - 0 ID=cds3292;Parent=gene3386;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NC_017265.1 RefSeq gene 3635383 3636477 . - . ID=gene3387;Name=YPC_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16975 NC_017265.1 Protein Homology CDS 3635383 3636477 . - 0 ID=cds3293;Parent=gene3387;Dbxref=Genbank:WP_002209311.1;Name=WP_002209311.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NC_017265.1 RefSeq gene 3636757 3638268 . + . ID=gene3388;Name=YPC_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16980;old_locus_tag=YPC_3778 NC_017265.1 Protein Homology CDS 3636757 3638268 . + 0 ID=cds3294;Parent=gene3388;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NC_017265.1 RefSeq gene 3638419 3638868 . + . ID=gene3389;Name=YPC_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16985;old_locus_tag=YPC_3779 NC_017265.1 Protein Homology CDS 3638419 3638868 . + 0 ID=cds3295;Parent=gene3389;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NC_017265.1 RefSeq gene 3638881 3641778 . + . ID=gene3390;Name=YPC_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16990;old_locus_tag=YPC_3780 NC_017265.1 Protein Homology CDS 3638881 3641778 . + 0 ID=cds3296;Parent=gene3390;Dbxref=Genbank:WP_002209307.1;Name=WP_002209307.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_002209307.1;transl_table=11 NC_017265.1 RefSeq gene 3641920 3642423 . + . ID=gene3391;Name=YPC_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS16995;old_locus_tag=YPC_3781 NC_017265.1 Protein Homology CDS 3641920 3642423 . + 0 ID=cds3297;Parent=gene3391;Dbxref=Genbank:WP_002223170.1;Name=WP_002223170.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002223170.1;transl_table=11 NC_017265.1 RefSeq gene 3642633 3643064 . - . ID=gene3392;Name=YPC_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17000;old_locus_tag=YPC_3782 NC_017265.1 Protein Homology CDS 3642633 3643064 . - 0 ID=cds3298;Parent=gene3392;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11 NC_017265.1 RefSeq gene 3643276 3644283 . + . ID=gene3393;Name=YPC_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17005;old_locus_tag=YPC_3783 NC_017265.1 Protein Homology CDS 3643276 3644283 . + 0 ID=cds3299;Parent=gene3393;Dbxref=Genbank:WP_002209302.1;Name=WP_002209302.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_002209302.1;transl_table=11 NC_017265.1 RefSeq gene 3644590 3645048 . - . ID=gene3394;Name=YPC_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17010;old_locus_tag=YPC_3784 NC_017265.1 Protein Homology CDS 3644590 3645048 . - 0 ID=cds3300;Parent=gene3394;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3645322 3645491 . + . ID=id294;gbkey=repeat_region NC_017265.1 RefSeq gene 3645687 3647255 . + . ID=gene3395;Name=YPC_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17015;old_locus_tag=YPC_3786 NC_017265.1 Protein Homology CDS 3645687 3647255 . + 0 ID=cds3301;Parent=gene3395;Dbxref=Genbank:WP_012105726.1;Name=WP_012105726.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012105726.1;transl_table=11 NC_017265.1 RefSeq gene 3647351 3648400 . + . ID=gene3396;Name=YPC_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17020;old_locus_tag=YPC_3787 NC_017265.1 Protein Homology CDS 3647351 3648400 . + 0 ID=cds3302;Parent=gene3396;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NC_017265.1 RefSeq gene 3648419 3649255 . + . ID=gene3397;Name=YPC_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17025;old_locus_tag=YPC_3788 NC_017265.1 Protein Homology CDS 3648419 3649255 . + 0 ID=cds3303;Parent=gene3397;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NC_017265.1 RefSeq gene 3649248 3650126 . + . ID=gene3398;Name=YPC_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17030;old_locus_tag=YPC_3789 NC_017265.1 Protein Homology CDS 3649248 3650126 . + 0 ID=cds3304;Parent=gene3398;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NC_017265.1 RefSeq gene 3650113 3650829 . + . ID=gene3399;Name=YPC_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17035;old_locus_tag=YPC_3790 NC_017265.1 Protein Homology CDS 3650113 3650829 . + 0 ID=cds3305;Parent=gene3399;Dbxref=Genbank:WP_002209297.1;Name=WP_002209297.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209297.1;transl_table=11 NC_017265.1 RefSeq gene 3651263 3653401 . + . ID=gene3400;Name=YPC_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17040;old_locus_tag=YPC_3791 NC_017265.1 Protein Homology CDS 3651263 3653401 . + 0 ID=cds3306;Parent=gene3400;Dbxref=Genbank:WP_002209296.1;Name=WP_002209296.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NC_017265.1 RefSeq gene 3653578 3654042 . + . ID=gene3401;Name=YPC_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17045;old_locus_tag=YPC_3792 NC_017265.1 Protein Homology CDS 3653578 3654042 . + 0 ID=cds3307;Parent=gene3401;Dbxref=Genbank:WP_025470743.1;Name=WP_025470743.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_025470743.1;transl_table=11 NC_017265.1 RefSeq gene 3654370 3655095 . + . ID=gene3402;Name=YPC_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17050;old_locus_tag=YPC_3795 NC_017265.1 Protein Homology CDS 3654370 3655095 . + 0 ID=cds3308;Parent=gene3402;Dbxref=Genbank:WP_002209293.1;Name=WP_002209293.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_002209293.1;transl_table=11 NC_017265.1 RefSeq gene 3655096 3655572 . + . ID=gene3403;Name=YPC_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17055;old_locus_tag=YPC_3796 NC_017265.1 Protein Homology CDS 3655096 3655572 . + 0 ID=cds3309;Parent=gene3403;Dbxref=Genbank:WP_002209292.1;Name=WP_002209292.1;gbkey=CDS;product=phosphonate metabolism protein PhnG;protein_id=WP_002209292.1;transl_table=11 NC_017265.1 RefSeq gene 3655572 3656197 . + . ID=gene3404;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=pseudogene;locus_tag=YPC_RS17060;old_locus_tag=YPC_3797;pseudo=true NC_017265.1 Protein Homology CDS 3655572 3656197 . + 0 ID=cds3310;Parent=gene3404;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=phnH;product=carbon-phosphorus lyase complex subunit;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3656197 3657375 . + . ID=gene3405;Name=YPC_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17065;old_locus_tag=YPC_3798 NC_017265.1 Protein Homology CDS 3656197 3657375 . + 0 ID=cds3311;Parent=gene3405;Dbxref=Genbank:WP_002209290.1;Name=WP_002209290.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_002209290.1;transl_table=11 NC_017265.1 RefSeq gene 3657368 3658249 . + . ID=gene3406;Name=YPC_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17070;old_locus_tag=YPC_3799 NC_017265.1 Protein Homology CDS 3657368 3658249 . + 0 ID=cds3312;Parent=gene3406;Dbxref=Genbank:WP_015683740.1;Name=WP_015683740.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_015683740.1;transl_table=11 NC_017265.1 RefSeq gene 3658249 3659040 . + . ID=gene3407;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YPC_RS17075;old_locus_tag=YPC_3800 NC_017265.1 Protein Homology CDS 3658249 3659040 . + 0 ID=cds3313;Parent=gene3407;Dbxref=Genbank:WP_002209288.1;Name=WP_002209288.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_002209288.1;transl_table=11 NC_017265.1 RefSeq gene 3659429 3660148 . + . ID=gene3408;Name=YPC_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17080;old_locus_tag=YPC_3801 NC_017265.1 Protein Homology CDS 3659429 3660148 . + 0 ID=cds3314;Parent=gene3408;Dbxref=Genbank:WP_002209287.1;Name=WP_002209287.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002209287.1;transl_table=11 NC_017265.1 RefSeq gene 3660145 3661281 . + . ID=gene3409;Name=YPC_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17085;old_locus_tag=YPC_3802 NC_017265.1 Protein Homology CDS 3660145 3661281 . + 0 ID=cds3315;Parent=gene3409;Dbxref=Genbank:WP_002209286.1;Name=WP_002209286.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_002209286.1;transl_table=11 NC_017265.1 RefSeq gene 3661281 3661862 . + . ID=gene3410;Name=YPC_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17090;old_locus_tag=YPC_3803 NC_017265.1 Protein Homology CDS 3661281 3661862 . + 0 ID=cds3316;Parent=gene3410;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11 NC_017265.1 RefSeq gene 3661853 3662605 . + . ID=gene3411;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YPC_RS17095;old_locus_tag=YPC_3804 NC_017265.1 Protein Homology CDS 3661853 3662605 . + 0 ID=cds3317;Parent=gene3411;Dbxref=Genbank:WP_002209284.1;Name=WP_002209284.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_002209284.1;transl_table=11 NC_017265.1 RefSeq gene 3662618 3663256 . - . ID=gene3412;Name=YPC_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17100;old_locus_tag=YPC_3805 NC_017265.1 Protein Homology CDS 3662618 3663256 . - 0 ID=cds3318;Parent=gene3412;Dbxref=Genbank:WP_002209283.1;Name=WP_002209283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209283.1;transl_table=11 NC_017265.1 RefSeq gene 3663408 3663851 . - . ID=gene3413;Name=YPC_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17105;old_locus_tag=YPC_3806 NC_017265.1 Protein Homology CDS 3663408 3663851 . - 0 ID=cds3319;Parent=gene3413;Dbxref=Genbank:WP_002209282.1;Name=WP_002209282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209282.1;transl_table=11 NC_017265.1 RefSeq gene 3663950 3665116 . - . ID=gene3414;Name=YPC_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17110;old_locus_tag=YPC_3807 NC_017265.1 Protein Homology CDS 3663950 3665116 . - 0 ID=cds3320;Parent=gene3414;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11 NC_017265.1 RefSeq gene 3665131 3666225 . - . ID=gene3415;Name=YPC_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17115;old_locus_tag=YPC_3808 NC_017265.1 Protein Homology CDS 3665131 3666225 . - 0 ID=cds3321;Parent=gene3415;Dbxref=Genbank:WP_002209280.1;Name=WP_002209280.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209280.1;transl_table=11 NC_017265.1 RefSeq gene 3666237 3667076 . - . ID=gene3416;Name=YPC_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17120;old_locus_tag=YPC_3809 NC_017265.1 Protein Homology CDS 3666237 3667076 . - 0 ID=cds3322;Parent=gene3416;Dbxref=Genbank:WP_002209279.1;Name=WP_002209279.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NC_017265.1 RefSeq gene 3667095 3667979 . - . ID=gene3417;Name=YPC_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17125;old_locus_tag=YPC_3810 NC_017265.1 Protein Homology CDS 3667095 3667979 . - 0 ID=cds3323;Parent=gene3417;Dbxref=Genbank:WP_002209278.1;Name=WP_002209278.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209278.1;transl_table=11 NC_017265.1 RefSeq gene 3667987 3669300 . - . ID=gene3418;Name=YPC_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17130;old_locus_tag=YPC_3811 NC_017265.1 Protein Homology CDS 3667987 3669300 . - 0 ID=cds3324;Parent=gene3418;Dbxref=Genbank:WP_002209277.1;Name=WP_002209277.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209277.1;transl_table=11 NC_017265.1 RefSeq gene 3669861 3671084 . + . ID=gene3419;Name=YPC_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17135;old_locus_tag=YPC_3812 NC_017265.1 Protein Homology CDS 3669861 3671084 . + 0 ID=cds3325;Parent=gene3419;Dbxref=Genbank:WP_002209276.1;Name=WP_002209276.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209276.1;transl_table=11 NC_017265.1 RefSeq gene 3671108 3673126 . + . ID=gene3420;Name=YPC_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17140;old_locus_tag=YPC_3813 NC_017265.1 Protein Homology CDS 3671108 3673126 . + 0 ID=cds3326;Parent=gene3420;Dbxref=Genbank:WP_002209275.1;Name=WP_002209275.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209275.1;transl_table=11 NC_017265.1 RefSeq gene 3673357 3673644 . + . ID=gene3421;Name=YPC_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17145;old_locus_tag=YPC_3814 NC_017265.1 Protein Homology CDS 3673357 3673644 . + 0 ID=cds3327;Parent=gene3421;Dbxref=Genbank:WP_002209274.1;Name=WP_002209274.1;gbkey=CDS;product=nuclease;protein_id=WP_002209274.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3673611 3673742 . + . ID=id295;gbkey=repeat_region NC_017265.1 RefSeq gene 3673819 3674325 . - . ID=gene3422;Name=YPC_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17150;old_locus_tag=YPC_3815 NC_017265.1 Protein Homology CDS 3673819 3674325 . - 0 ID=cds3328;Parent=gene3422;Dbxref=Genbank:WP_002209273.1;Name=WP_002209273.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209273.1;transl_table=11 NC_017265.1 RefSeq gene 3674319 3674840 . - . ID=gene3423;Name=YPC_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17155;old_locus_tag=YPC_3816 NC_017265.1 Protein Homology CDS 3674319 3674840 . - 0 ID=cds3329;Parent=gene3423;Dbxref=Genbank:WP_015683741.1;Name=WP_015683741.1;gbkey=CDS;product=lipid carrier protein;protein_id=WP_015683741.1;transl_table=11 NC_017265.1 RefSeq gene 3674921 3675046 . + . ID=gene3424;Name=YPC_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17160;old_locus_tag=YPC_3817 NC_017265.1 Protein Homology CDS 3674921 3675046 . + 0 ID=cds3330;Parent=gene3424;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11 NC_017265.1 RefSeq gene 3675156 3676151 . + . ID=gene3425;Name=YPC_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17165;old_locus_tag=YPC_3818 NC_017265.1 Protein Homology CDS 3675156 3676151 . + 0 ID=cds3331;Parent=gene3425;Dbxref=Genbank:WP_002209270.1;Name=WP_002209270.1;gbkey=CDS;product=protease;protein_id=WP_002209270.1;transl_table=11 NC_017265.1 RefSeq gene 3676163 3677041 . + . ID=gene3426;Name=YPC_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17170;old_locus_tag=YPC_3819 NC_017265.1 Protein Homology CDS 3676163 3677041 . + 0 ID=cds3332;Parent=gene3426;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11 NC_017265.1 RefSeq gene 3677182 3678588 . - . ID=gene3427;Name=YPC_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17175;old_locus_tag=YPC_3820 NC_017265.1 Protein Homology CDS 3677182 3678588 . - 0 ID=cds3333;Parent=gene3427;Dbxref=Genbank:WP_002209268.1;Name=WP_002209268.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002209268.1;transl_table=11 NC_017265.1 RefSeq gene 3678590 3681715 . - . ID=gene3428;Name=YPC_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17180;old_locus_tag=YPC_3821 NC_017265.1 Protein Homology CDS 3678590 3681715 . - 0 ID=cds3334;Parent=gene3428;Dbxref=Genbank:WP_002209267.1;Name=WP_002209267.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002209267.1;transl_table=11 NC_017265.1 RefSeq gene 3681719 3682878 . - . ID=gene3429;Name=YPC_RS17185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS17185;pseudo=true NC_017265.1 Protein Homology CDS 3681719 3682878 . - 0 ID=cds3335;Parent=gene3429;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acriflavine resistance protein E;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3683386 3684440 . + . ID=gene3430;Name=YPC_RS17190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS17190;pseudo=true NC_017265.1 Protein Homology CDS 3683386 3684440 . + 0 ID=cds3336;Parent=gene3430;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 3684490 3684664 . + . ID=id296;gbkey=repeat_region NC_017265.1 RefSeq gene 3684695 3685006 . - . ID=gene3431;Name=YPC_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17195;old_locus_tag=YPC_3827 NC_017265.1 Protein Homology CDS 3684695 3685006 . - 0 ID=cds3337;Parent=gene3431;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11 NC_017265.1 RefSeq gene 3685030 3685398 . - . ID=gene3432;Name=YPC_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17200;old_locus_tag=YPC_3828 NC_017265.1 Protein Homology CDS 3685030 3685398 . - 0 ID=cds3338;Parent=gene3432;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11 NC_017265.1 RefSeq gene 3685441 3685614 . - . ID=gene3433;Name=YPC_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17205;old_locus_tag=YPC_3829 NC_017265.1 Protein Homology CDS 3685441 3685614 . - 0 ID=cds3339;Parent=gene3433;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11 NC_017265.1 RefSeq gene 3685634 3687628 . - . ID=gene3434;Name=YPC_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17210;old_locus_tag=YPC_3830 NC_017265.1 Protein Homology CDS 3685634 3687628 . - 0 ID=cds3340;Parent=gene3434;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NC_017265.1 RefSeq gene 3687815 3688699 . - . ID=gene3435;Name=YPC_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17215;old_locus_tag=YPC_3831 NC_017265.1 Protein Homology CDS 3687815 3688699 . - 0 ID=cds3341;Parent=gene3435;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NC_017265.1 RefSeq gene 3688824 3690941 . - . ID=gene3436;Name=YPC_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17220;old_locus_tag=YPC_3832 NC_017265.1 Protein Homology CDS 3688824 3690941 . - 0 ID=cds3342;Parent=gene3436;Dbxref=Genbank:WP_002209259.1;Name=WP_002209259.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3691176 3692619 . + . ID=id297;gbkey=repeat_region NC_017265.1 RefSeq gene 3691208 3691993 . - . ID=gene3437;Name=YPC_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17225;old_locus_tag=YPC_3833 NC_017265.1 Protein Homology CDS 3691208 3691993 . - 0 ID=cds3343;Parent=gene3437;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_017265.1 RefSeq gene 3692047 3692562 . - . ID=gene3438;Name=YPC_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17230;old_locus_tag=YPC_3834 NC_017265.1 Protein Homology CDS 3692047 3692562 . - 0 ID=cds3344;Parent=gene3438;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_017265.1 RefSeq gene 3692656 3693879 . - . ID=gene3439;Name=YPC_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17235;old_locus_tag=YPC_3835 NC_017265.1 Protein Homology CDS 3692656 3693879 . - 0 ID=cds3345;Parent=gene3439;Dbxref=Genbank:WP_002211421.1;Name=WP_002211421.1;gbkey=CDS;product=flagellin;protein_id=WP_002211421.1;transl_table=11 NC_017265.1 RefSeq gene 3694505 3695551 . + . ID=gene3440;Name=YPC_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17240;old_locus_tag=YPC_3837 NC_017265.1 Protein Homology CDS 3694505 3695551 . + 0 ID=cds3346;Parent=gene3440;Dbxref=Genbank:WP_002211422.1;Name=WP_002211422.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211422.1;transl_table=11 NC_017265.1 RefSeq gene 3695532 3695978 . + . ID=gene3441;Name=YPC_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17245;old_locus_tag=YPC_3838 NC_017265.1 Protein Homology CDS 3695532 3695978 . + 0 ID=cds3347;Parent=gene3441;Dbxref=Genbank:WP_002211423.1;Name=WP_002211423.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211423.1;transl_table=11 NC_017265.1 RefSeq gene 3696142 3697155 . - . ID=gene3442;Name=YPC_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17250;old_locus_tag=YPC_3839 NC_017265.1 Protein Homology CDS 3696142 3697155 . - 0 ID=cds3348;Parent=gene3442;Dbxref=Genbank:WP_002211424.1;Name=WP_002211424.1;gbkey=CDS;product=flagellar hook associated protein lafW;protein_id=WP_002211424.1;transl_table=11 NC_017265.1 RefSeq gene 3697167 3698090 . - . ID=gene3443;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPC_RS17255;old_locus_tag=YPC_3840 NC_017265.1 Protein Homology CDS 3697167 3698090 . - 0 ID=cds3349;Parent=gene3443;Dbxref=Genbank:WP_002211425.1;Name=WP_002211425.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211425.1;transl_table=11 NC_017265.1 RefSeq gene 3698119 3699480 . - . ID=gene3444;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPC_RS17260;old_locus_tag=YPC_3841 NC_017265.1 Protein Homology CDS 3698119 3699480 . - 0 ID=cds3350;Parent=gene3444;Dbxref=Genbank:WP_002211426.1;Name=WP_002211426.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211426.1;transl_table=11 NC_017265.1 RefSeq gene 3699593 3699886 . - . ID=gene3445;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPC_RS17265;old_locus_tag=YPC_3842 NC_017265.1 Protein Homology CDS 3699593 3699886 . - 0 ID=cds3351;Parent=gene3445;Dbxref=Genbank:WP_002211427.1;Name=WP_002211427.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_002211427.1;transl_table=11 NC_017265.1 RefSeq gene 3699896 3701038 . - . ID=gene3446;Name=YPC_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17270;old_locus_tag=YPC_3843 NC_017265.1 Protein Homology CDS 3699896 3701038 . - 0 ID=cds3352;Parent=gene3446;Dbxref=Genbank:WP_042468851.1;Name=WP_042468851.1;gbkey=CDS;product=flagellar P-ring protein FlgI;protein_id=WP_042468851.1;transl_table=11 NC_017265.1 RefSeq gene 3701085 3701750 . - . ID=gene3447;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPC_RS17275;old_locus_tag=YPC_3844 NC_017265.1 Protein Homology CDS 3701085 3701750 . - 0 ID=cds3353;Parent=gene3447;Dbxref=Genbank:WP_002211429.1;Name=WP_002211429.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein FlgH;protein_id=WP_002211429.1;transl_table=11 NC_017265.1 RefSeq gene 3701785 3702570 . - . ID=gene3448;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPC_RS17280;old_locus_tag=YPC_3845 NC_017265.1 Protein Homology CDS 3701785 3702570 . - 0 ID=cds3354;Parent=gene3448;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NC_017265.1 RefSeq gene 3702638 3703369 . - . ID=gene3449;Name=YPC_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17285;old_locus_tag=YPC_3846 NC_017265.1 Protein Homology CDS 3702638 3703369 . - 0 ID=cds3355;Parent=gene3449;Dbxref=Genbank:WP_002223685.1;Name=WP_002223685.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_002223685.1;transl_table=11 NC_017265.1 RefSeq gene 3703369 3704610 . - . ID=gene3450;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPC_RS17290;old_locus_tag=YPC_3847 NC_017265.1 Protein Homology CDS 3703369 3704610 . - 0 ID=cds3356;Parent=gene3450;Dbxref=Genbank:WP_002211432.1;Name=WP_002211432.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211432.1;transl_table=11 NC_017265.1 RefSeq gene 3704665 3705321 . - . ID=gene3451;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPC_RS17295;old_locus_tag=YPC_3848 NC_017265.1 Protein Homology CDS 3704665 3705321 . - 0 ID=cds3357;Parent=gene3451;Dbxref=Genbank:WP_002211433.1;Name=WP_002211433.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_002211433.1;transl_table=11 NC_017265.1 RefSeq gene 3705324 3705749 . - . ID=gene3452;Name=YPC_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17300;old_locus_tag=YPC_3849 NC_017265.1 Protein Homology CDS 3705324 3705749 . - 0 ID=cds3358;Parent=gene3452;Dbxref=Genbank:WP_002211434.1;Name=WP_002211434.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11 NC_017265.1 RefSeq gene 3705752 3706198 . - . ID=gene3453;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPC_RS17305;old_locus_tag=YPC_3850 NC_017265.1 Protein Homology CDS 3705752 3706198 . - 0 ID=cds3359;Parent=gene3453;Dbxref=Genbank:WP_002211435.1;Name=WP_002211435.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211435.1;transl_table=11 NC_017265.1 RefSeq gene 3706256 3707104 . + . ID=gene3454;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPC_RS17310;old_locus_tag=YPC_3851 NC_017265.1 Protein Homology CDS 3706256 3707104 . + 0 ID=cds3360;Parent=gene3454;Dbxref=Genbank:WP_002211436.1;Name=WP_002211436.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002211436.1;transl_table=11 NC_017265.1 RefSeq gene 3707333 3707599 . + . ID=gene3455;Name=YPC_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17315;old_locus_tag=YPC_3852 NC_017265.1 Protein Homology CDS 3707333 3707599 . + 0 ID=cds3361;Parent=gene3455;Dbxref=Genbank:WP_002211437.1;Name=WP_002211437.1;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211437.1;transl_table=11 NC_017265.1 RefSeq gene 3707606 3708031 . + . ID=gene3456;Name=YPC_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17320;old_locus_tag=YPC_3853 NC_017265.1 Protein Homology CDS 3707606 3708031 . + 0 ID=cds3362;Parent=gene3456;Dbxref=Genbank:WP_002211438.1;Name=WP_002211438.1;gbkey=CDS;product=flagellar protein FlgN;protein_id=WP_002211438.1;transl_table=11 NC_017265.1 RefSeq gene 3708359 3708796 . - . ID=gene3457;Name=YPC_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17325;old_locus_tag=YPC_3854 NC_017265.1 Protein Homology CDS 3708359 3708796 . - 0 ID=cds3363;Parent=gene3457;Dbxref=Genbank:WP_002223686.1;Name=WP_002223686.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_002223686.1;transl_table=11 NC_017265.1 RefSeq gene 3708800 3710140 . - . ID=gene3458;Name=YPC_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17330;old_locus_tag=YPC_3855 NC_017265.1 Protein Homology CDS 3708800 3710140 . - 0 ID=cds3364;Parent=gene3458;Dbxref=Genbank:WP_002211440.1;Name=WP_002211440.1;gbkey=CDS;product=flagellum-specific ATP synthase;protein_id=WP_002211440.1;transl_table=11 NC_017265.1 RefSeq gene 3710133 3710849 . - . ID=gene3459;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPC_RS17335;old_locus_tag=YPC_3856 NC_017265.1 Protein Homology CDS 3710133 3710849 . - 0 ID=cds3365;Parent=gene3459;Dbxref=Genbank:WP_002213763.1;Name=WP_002213763.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_002213763.1;transl_table=11 NC_017265.1 RefSeq gene 3710854 3711897 . - . ID=gene3460;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPC_RS17340;old_locus_tag=YPC_3857 NC_017265.1 Protein Homology CDS 3710854 3711897 . - 0 ID=cds3366;Parent=gene3460;Dbxref=Genbank:WP_002211442.1;Name=WP_002211442.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11 NC_017265.1 RefSeq gene 3711869 3713509 . - . ID=gene3461;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPC_RS17345;old_locus_tag=YPC_3858 NC_017265.1 Protein Homology CDS 3711869 3713509 . - 0 ID=cds3367;Parent=gene3461;Dbxref=Genbank:WP_002211443.1;Name=WP_002211443.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=WP_002211443.1;transl_table=11 NC_017265.1 RefSeq gene 3713519 3713899 . - . ID=gene3462;Name=YPC_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17350;old_locus_tag=YPC_3859 NC_017265.1 Protein Homology CDS 3713519 3713899 . - 0 ID=cds3368;Parent=gene3462;Dbxref=Genbank:WP_002211444.1;Name=WP_002211444.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_002211444.1;transl_table=11 NC_017265.1 RefSeq gene 3713916 3714944 . - . ID=gene3463;Name=YPC_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17355;old_locus_tag=YPC_3860 NC_017265.1 Protein Homology CDS 3713916 3714944 . - 0 ID=cds3369;Parent=gene3463;Dbxref=Genbank:WP_002211445.1;Name=WP_002211445.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002211445.1;transl_table=11 NC_017265.1 RefSeq gene 3715467 3716366 . + . ID=gene3464;Name=YPC_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17360;old_locus_tag=YPC_3861 NC_017265.1 Protein Homology CDS 3715467 3716366 . + 0 ID=cds3370;Parent=gene3464;Dbxref=Genbank:WP_002211446.1;Name=WP_002211446.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_002211446.1;transl_table=11 NC_017265.1 RefSeq gene 3716359 3716772 . + . ID=gene3465;Name=YPC_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17365;old_locus_tag=YPC_3862 NC_017265.1 Protein Homology CDS 3716359 3716772 . + 0 ID=cds3371;Parent=gene3465;Dbxref=Genbank:WP_002211447.1;Name=WP_002211447.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11 NC_017265.1 RefSeq gene 3716769 3717539 . + . ID=gene3466;Name=YPC_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17370;old_locus_tag=YPC_3863 NC_017265.1 Protein Homology CDS 3716769 3717539 . + 0 ID=cds3372;Parent=gene3466;Dbxref=Genbank:WP_002211448.1;Name=WP_002211448.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_002211448.1;transl_table=11 NC_017265.1 RefSeq gene 3717541 3717813 . + . ID=gene3467;Name=YPC_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17375;old_locus_tag=YPC_3864 NC_017265.1 Protein Homology CDS 3717541 3717813 . + 0 ID=cds3373;Parent=gene3467;Dbxref=Genbank:WP_002211449.1;Name=WP_002211449.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11 NC_017265.1 RefSeq gene 3717820 3718593 . + . ID=gene3468;Name=YPC_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17380;old_locus_tag=YPC_3865 NC_017265.1 Protein Homology CDS 3717820 3718593 . + 0 ID=cds3374;Parent=gene3468;Dbxref=Genbank:WP_002213766.1;Name=WP_002213766.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_002213766.1;transl_table=11 NC_017265.1 RefSeq gene 3718593 3719726 . + . ID=gene3469;Name=YPC_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17385;old_locus_tag=YPC_3866 NC_017265.1 Protein Homology CDS 3718593 3719726 . + 0 ID=cds3375;Parent=gene3469;Dbxref=Genbank:WP_002211451.1;Name=WP_002211451.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211451.1;transl_table=11 NC_017265.1 RefSeq gene 3719713 3721809 . + . ID=gene3470;Name=YPC_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17390;old_locus_tag=YPC_3867 NC_017265.1 Protein Homology CDS 3719713 3721809 . + 0 ID=cds3376;Parent=gene3470;Dbxref=Genbank:WP_011566329.1;Name=WP_011566329.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_011566329.1;transl_table=11 NC_017265.1 RefSeq gene 3722021 3722590 . + . ID=gene3471;Name=YPC_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17395;old_locus_tag=YPC_3869 NC_017265.1 Protein Homology CDS 3722021 3722590 . + 0 ID=cds3377;Parent=gene3471;Dbxref=Genbank:WP_002228082.1;Name=WP_002228082.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002228082.1;transl_table=11 NC_017265.1 RefSeq gene 3722682 3723677 . - . ID=gene3472;Name=YPC_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17400;old_locus_tag=YPC_3870 NC_017265.1 Protein Homology CDS 3722682 3723677 . - 0 ID=cds3378;Parent=gene3472;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11 NC_017265.1 RefSeq gene 3724533 3725612 . + . ID=gene3473;Name=YPC_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17405;old_locus_tag=YPC_3873 NC_017265.1 Protein Homology CDS 3724533 3725612 . + 0 ID=cds3379;Parent=gene3473;Dbxref=Genbank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3725640 3725777 . + . ID=id298;gbkey=repeat_region NC_017265.1 RefSeq gene 3725824 3726930 . - . ID=gene3474;Name=YPC_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17410;old_locus_tag=YPC_3874 NC_017265.1 Protein Homology CDS 3725824 3726930 . - 0 ID=cds3380;Parent=gene3474;Dbxref=Genbank:WP_002211456.1;Name=WP_002211456.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211456.1;transl_table=11 NC_017265.1 RefSeq gene 3726955 3727674 . - . ID=gene3475;Name=YPC_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17415;old_locus_tag=YPC_3875 NC_017265.1 Protein Homology CDS 3726955 3727674 . - 0 ID=cds3381;Parent=gene3475;Dbxref=Genbank:WP_002211457.1;Name=WP_002211457.1;gbkey=CDS;product=fimbrial chaperone protein;protein_id=WP_002211457.1;transl_table=11 NC_017265.1 RefSeq gene 3727692 3730172 . - . ID=gene3476;Name=YPC_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17420;old_locus_tag=YPC_3876 NC_017265.1 Protein Homology CDS 3727692 3730172 . - 0 ID=cds3382;Parent=gene3476;Dbxref=Genbank:WP_002211458.1;Name=WP_002211458.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211458.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3730416 3731135 . + . ID=id299;gbkey=repeat_region NC_017265.1 RefSeq gene 3730525 3730983 . - . ID=gene3477;Name=YPC_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17425;old_locus_tag=YPC_3877 NC_017265.1 Protein Homology CDS 3730525 3730983 . - 0 ID=cds3383;Parent=gene3477;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 3731183 3731605 . + . ID=gene3478;Name=YPC_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17430;old_locus_tag=YPC_3879 NC_017265.1 Protein Homology CDS 3731183 3731605 . + 0 ID=cds3384;Parent=gene3478;Dbxref=Genbank:WP_002211459.1;Name=WP_002211459.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211459.1;transl_table=11 NC_017265.1 RefSeq gene 3731657 3732523 . + . ID=gene3479;Name=YPC_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17435;old_locus_tag=YPC_3880 NC_017265.1 Protein Homology CDS 3731657 3732523 . + 0 ID=cds3385;Parent=gene3479;Dbxref=Genbank:WP_002211460.1;Name=WP_002211460.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211460.1;transl_table=11 NC_017265.1 RefSeq gene 3732520 3733374 . + . ID=gene3480;Name=YPC_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17440;old_locus_tag=YPC_3881 NC_017265.1 Protein Homology CDS 3732520 3733374 . + 0 ID=cds3386;Parent=gene3480;Dbxref=Genbank:WP_002213778.1;Name=WP_002213778.1;gbkey=CDS;product=pilus assembly protein CpaC;protein_id=WP_002213778.1;transl_table=11 NC_017265.1 RefSeq gene 3733389 3733838 . + . ID=gene3481;Name=YPC_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17445;old_locus_tag=YPC_3882 NC_017265.1 Protein Homology CDS 3733389 3733838 . + 0 ID=cds3387;Parent=gene3481;Dbxref=Genbank:WP_002228297.1;Name=WP_002228297.1;gbkey=CDS;product=secretion protein;protein_id=WP_002228297.1;transl_table=11 NC_017265.1 RefSeq gene 3733835 3734125 . + . ID=gene3482;Name=YPC_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17450 NC_017265.1 Protein Homology CDS 3733835 3734125 . + 0 ID=cds3388;Parent=gene3482;Dbxref=Genbank:WP_002213782.1;Name=WP_002213782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213782.1;transl_table=11 NC_017265.1 RefSeq gene 3734136 3735263 . + . ID=gene3483;Name=YPC_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17455;old_locus_tag=YPC_3883 NC_017265.1 Protein Homology CDS 3734136 3735263 . + 0 ID=cds3389;Parent=gene3483;Dbxref=Genbank:WP_002213784.1;Name=WP_002213784.1;gbkey=CDS;product=pilus assembly protein CpaE;protein_id=WP_002213784.1;transl_table=11 NC_017265.1 RefSeq gene 3735275 3736561 . + . ID=gene3484;Name=YPC_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17460;old_locus_tag=YPC_3884 NC_017265.1 Protein Homology CDS 3735275 3736561 . + 0 ID=cds3390;Parent=gene3484;Dbxref=Genbank:WP_015683744.1;Name=WP_015683744.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_015683744.1;transl_table=11 NC_017265.1 RefSeq gene 3736558 3737433 . + . ID=gene3485;Name=YPC_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17465;old_locus_tag=YPC_3885 NC_017265.1 Protein Homology CDS 3736558 3737433 . + 0 ID=cds3391;Parent=gene3485;Dbxref=Genbank:WP_002212164.1;Name=WP_002212164.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212164.1;transl_table=11 NC_017265.1 RefSeq gene 3737430 3738263 . + . ID=gene3486;Name=YPC_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17470;old_locus_tag=YPC_3886 NC_017265.1 Protein Homology CDS 3737430 3738263 . + 0 ID=cds3392;Parent=gene3486;Dbxref=Genbank:WP_002212165.1;Name=WP_002212165.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212165.1;transl_table=11 NC_017265.1 RefSeq gene 3738247 3739017 . + . ID=gene3487;Name=YPC_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17475;old_locus_tag=YPC_3887 NC_017265.1 Protein Homology CDS 3738247 3739017 . + 0 ID=cds3393;Parent=gene3487;Dbxref=Genbank:WP_002212166.1;Name=WP_002212166.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212166.1;transl_table=11 NC_017265.1 RefSeq gene 3739014 3739487 . + . ID=gene3488;Name=YPC_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17480;old_locus_tag=YPC_3888 NC_017265.1 Protein Homology CDS 3739014 3739487 . + 0 ID=cds3394;Parent=gene3488;Dbxref=Genbank:WP_052494309.1;Name=WP_052494309.1;gbkey=CDS;product=pilus assembly protein TadE;protein_id=WP_052494309.1;transl_table=11 NC_017265.1 RefSeq gene 3739471 3740043 . + . ID=gene3489;Name=YPC_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17485;old_locus_tag=YPC_3889 NC_017265.1 Protein Homology CDS 3739471 3740043 . + 0 ID=cds3395;Parent=gene3489;Dbxref=Genbank:WP_002212168.1;Name=WP_002212168.1;gbkey=CDS;product=pseudopilin;protein_id=WP_002212168.1;transl_table=11 NC_017265.1 RefSeq gene 3740068 3741624 . + . ID=gene3490;Name=YPC_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17490;old_locus_tag=YPC_3890 NC_017265.1 Protein Homology CDS 3740068 3741624 . + 0 ID=cds3396;Parent=gene3490;Dbxref=Genbank:WP_002212169.1;Name=WP_002212169.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212169.1;transl_table=11 NC_017265.1 RefSeq gene 3741721 3742152 . - . ID=gene3491;Name=YPC_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17495;old_locus_tag=YPC_3891 NC_017265.1 Protein Homology CDS 3741721 3742152 . - 0 ID=cds3397;Parent=gene3491;Dbxref=Genbank:WP_002212170.1;Name=WP_002212170.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_002212170.1;transl_table=11 NC_017265.1 RefSeq gene 3742156 3742869 . - . ID=gene3492;Name=YPC_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17500 NC_017265.1 Protein Homology CDS 3742156 3742869 . - 0 ID=cds3398;Parent=gene3492;Dbxref=Genbank:WP_042468853.1;Name=WP_042468853.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_042468853.1;transl_table=11 NC_017265.1 RefSeq gene 3743672 3744883 . + . ID=gene3493;Name=YPC_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17505;old_locus_tag=YPC_3893 NC_017265.1 Protein Homology CDS 3743672 3744883 . + 0 ID=cds3399;Parent=gene3493;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NC_017265.1 RefSeq gene 3745076 3745738 . + . ID=gene3494;Name=YPC_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17510;old_locus_tag=YPC_3894 NC_017265.1 Protein Homology CDS 3745076 3745738 . + 0 ID=cds3400;Parent=gene3494;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11 NC_017265.1 RefSeq gene 3745830 3746723 . - . ID=gene3495;Name=YPC_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17515;old_locus_tag=YPC_3895 NC_017265.1 Protein Homology CDS 3745830 3746723 . - 0 ID=cds3401;Parent=gene3495;Dbxref=Genbank:WP_015683747.1;Name=WP_015683747.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_015683747.1;transl_table=11 NC_017265.1 RefSeq gene 3747121 3748278 . + . ID=gene3496;Name=YPC_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17520;old_locus_tag=YPC_3896 NC_017265.1 Protein Homology CDS 3747121 3748278 . + 0 ID=cds3402;Parent=gene3496;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11 NC_017265.1 RefSeq gene 3748341 3748550 . - . ID=gene3497;Name=YPC_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17525;old_locus_tag=YPC_3897 NC_017265.1 Protein Homology CDS 3748341 3748550 . - 0 ID=cds3403;Parent=gene3497;Dbxref=Genbank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11 NC_017265.1 RefSeq gene 3748697 3749530 . + . ID=gene3498;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YPC_RS17530;old_locus_tag=YPC_3898 NC_017265.1 Protein Homology CDS 3748697 3749530 . + 0 ID=cds3404;Parent=gene3498;Dbxref=Genbank:WP_002212175.1;Name=WP_002212175.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase A;protein_id=WP_002212175.1;transl_table=11 NC_017265.1 RefSeq gene 3749552 3751896 . - . ID=gene3499;Name=YPC_RS17535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS17535;pseudo=true NC_017265.1 Protein Homology CDS 3749552 3751896 . - 0 ID=cds3405;Parent=gene3499;exception=annotated by transcript or proteomic data;gbkey=CDS;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3752204 3753628 . - . ID=gene3500;Name=YPC_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17540;old_locus_tag=YPC_3901 NC_017265.1 Protein Homology CDS 3752204 3753628 . - 0 ID=cds3406;Parent=gene3500;Dbxref=Genbank:WP_002212176.1;Name=WP_002212176.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsP;protein_id=WP_002212176.1;transl_table=11 NC_017265.1 RefSeq gene 3753807 3754538 . - . ID=gene3501;Name=YPC_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17545;old_locus_tag=YPC_3902 NC_017265.1 Protein Homology CDS 3753807 3754538 . - 0 ID=cds3407;Parent=gene3501;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11 NC_017265.1 RefSeq gene 3754827 3757100 . - . ID=gene3502;Name=YPC_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17550;old_locus_tag=YPC_3903 NC_017265.1 Protein Homology CDS 3754827 3757100 . - 0 ID=cds3408;Parent=gene3502;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NC_017265.1 RefSeq gene 3757083 3757331 . + . ID=gene3503;Name=YPC_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17555 NC_017265.1 Protein Homology CDS 3757083 3757331 . + 0 ID=cds3409;Parent=gene3503;Dbxref=Genbank:WP_002216196.1;Name=WP_002216196.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216196.1;transl_table=11 NC_017265.1 RefSeq gene 3757404 3757988 . + . ID=gene3504;Name=YPC_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17560;old_locus_tag=YPC_3904 NC_017265.1 Protein Homology CDS 3757404 3757988 . + 0 ID=cds3410;Parent=gene3504;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11 NC_017265.1 RefSeq gene 3758046 3758957 . - . ID=gene3505;Name=YPC_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17565;old_locus_tag=YPC_3905 NC_017265.1 Protein Homology CDS 3758046 3758957 . - 0 ID=cds3411;Parent=gene3505;Dbxref=Genbank:WP_002212180.1;Name=WP_002212180.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212180.1;transl_table=11 NC_017265.1 RefSeq gene 3758961 3760856 . - . ID=gene3506;Name=YPC_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17570;old_locus_tag=YPC_3906 NC_017265.1 Protein Homology CDS 3758961 3760856 . - 0 ID=cds3412;Parent=gene3506;Dbxref=Genbank:WP_002212181.1;Name=WP_002212181.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NC_017265.1 RefSeq gene 3760958 3761539 . - . ID=gene3507;Name=YPC_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17575;old_locus_tag=YPC_3907 NC_017265.1 Protein Homology CDS 3760958 3761539 . - 0 ID=cds3413;Parent=gene3507;Dbxref=Genbank:WP_002212182.1;Name=WP_002212182.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_002212182.1;transl_table=11 NC_017265.1 RefSeq gene 3761597 3762367 . - . ID=gene3508;Name=YPC_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17580;old_locus_tag=YPC_3908 NC_017265.1 Protein Homology CDS 3761597 3762367 . - 0 ID=cds3414;Parent=gene3508;Dbxref=Genbank:WP_015683748.1;Name=WP_015683748.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_015683748.1;transl_table=11 NC_017265.1 RefSeq gene 3762450 3762875 . - . ID=gene3509;Name=YPC_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17585;old_locus_tag=YPC_3910 NC_017265.1 Protein Homology CDS 3762450 3762875 . - 0 ID=cds3415;Parent=gene3509;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11 NC_017265.1 RefSeq gene 3762909 3763541 . - . ID=gene3510;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YPC_RS17590;old_locus_tag=YPC_3911 NC_017265.1 Protein Homology CDS 3762909 3763541 . - 0 ID=cds3416;Parent=gene3510;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11 NC_017265.1 RefSeq gene 3763937 3765334 . + . ID=gene3511;Name=YPC_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17595;old_locus_tag=YPC_3912 NC_017265.1 Protein Homology CDS 3763937 3765334 . + 0 ID=cds3417;Parent=gene3511;Dbxref=Genbank:WP_002212186.1;Name=WP_002212186.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_002212186.1;transl_table=11 NC_017265.1 RefSeq gene 3765399 3765569 . - . ID=gene3512;Name=YPC_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17600;old_locus_tag=YPC_3913 NC_017265.1 Protein Homology CDS 3765399 3765569 . - 0 ID=cds3418;Parent=gene3512;Dbxref=Genbank:WP_002223694.1;Name=WP_002223694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223694.1;transl_table=11 NC_017265.1 RefSeq gene 3765638 3766321 . + . ID=gene3513;Name=YPC_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17605;old_locus_tag=YPC_3914 NC_017265.1 Protein Homology CDS 3765638 3766321 . + 0 ID=cds3419;Parent=gene3513;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11 NC_017265.1 RefSeq gene 3766331 3767491 . + . ID=gene3514;Name=YPC_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17610;old_locus_tag=YPC_3915 NC_017265.1 Protein Homology CDS 3766331 3767491 . + 0 ID=cds3420;Parent=gene3514;Dbxref=Genbank:WP_002212188.1;Name=WP_002212188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212188.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3767527 3767897 . + . ID=id300;gbkey=repeat_region NC_017265.1 RefSeq gene 3767898 3768680 . - . ID=gene3515;Name=YPC_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17615;old_locus_tag=YPC_3916 NC_017265.1 Protein Homology CDS 3767898 3768680 . - 0 ID=cds3421;Parent=gene3515;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11 NC_017265.1 RefSeq gene 3769105 3769758 . - . ID=gene3516;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YPC_RS17620;old_locus_tag=YPC_3918 NC_017265.1 Protein Homology CDS 3769105 3769758 . - 0 ID=cds3422;Parent=gene3516;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NC_017265.1 RefSeq gene 3769947 3770291 . + . ID=gene3517;Name=YPC_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17625 NC_017265.1 Protein Homology CDS 3769947 3770291 . + 0 ID=cds3423;Parent=gene3517;Dbxref=Genbank:WP_014465988.1;Name=WP_014465988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014465988.1;transl_table=11 NC_017265.1 RefSeq gene 3770327 3770608 . + . ID=gene3518;Name=YPC_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17630;old_locus_tag=YPC_3919 NC_017265.1 Protein Homology CDS 3770327 3770608 . + 0 ID=cds3424;Parent=gene3518;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3770722 3770896 . + . ID=id301;gbkey=repeat_region NC_017265.1 RefSeq gene 3770933 3772183 . - . ID=gene3519;Name=YPC_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17635;old_locus_tag=YPC_3921 NC_017265.1 Protein Homology CDS 3770933 3772183 . - 0 ID=cds3425;Parent=gene3519;Dbxref=Genbank:WP_002212192.1;Name=WP_002212192.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_002212192.1;transl_table=11 NC_017265.1 RefSeq gene 3772220 3773650 . - . ID=gene3520;Name=YPC_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17640;old_locus_tag=YPC_3922 NC_017265.1 Protein Homology CDS 3772220 3773650 . - 0 ID=cds3426;Parent=gene3520;Dbxref=Genbank:WP_002212193.1;Name=WP_002212193.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_002212193.1;transl_table=11 NC_017265.1 RefSeq gene 3773785 3776640 . - . ID=gene3521;Name=YPC_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17645;old_locus_tag=YPC_3923 NC_017265.1 Protein Homology CDS 3773785 3776640 . - 0 ID=cds3427;Parent=gene3521;Dbxref=Genbank:WP_015683750.1;Name=WP_015683750.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_015683750.1;transl_table=11 NC_017265.1 RefSeq gene 3776949 3778118 . - . ID=gene3522;Name=YPC_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17650;old_locus_tag=YPC_3925 NC_017265.1 Protein Homology CDS 3776949 3778118 . - 0 ID=cds3428;Parent=gene3522;Dbxref=Genbank:WP_002231433.1;Name=WP_002231433.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231433.1;transl_table=11 NC_017265.1 RefSeq gene 3778422 3779045 . + . ID=gene3523;Name=YPC_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17655;old_locus_tag=YPC_3926 NC_017265.1 Protein Homology CDS 3778422 3779045 . + 0 ID=cds3429;Parent=gene3523;Dbxref=Genbank:WP_002212196.1;Name=WP_002212196.1;gbkey=CDS;product=signal transduction protein;protein_id=WP_002212196.1;transl_table=11 NC_017265.1 RefSeq gene 3779205 3780443 . + . ID=gene3524;Name=YPC_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17660;old_locus_tag=YPC_3927 NC_017265.1 Protein Homology CDS 3779205 3780443 . + 0 ID=cds3430;Parent=gene3524;Dbxref=Genbank:WP_002212197.1;Name=WP_002212197.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_002212197.1;transl_table=11 NC_017265.1 RefSeq gene 3780679 3781497 . - . ID=gene3525;Name=YPC_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17665;old_locus_tag=YPC_3928 NC_017265.1 Protein Homology CDS 3780679 3781497 . - 0 ID=cds3431;Parent=gene3525;Dbxref=Genbank:WP_002212198.1;Name=WP_002212198.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_002212198.1;transl_table=11 NC_017265.1 RefSeq gene 3781771 3782130 . - . ID=gene3526;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YPC_RS17670;old_locus_tag=YPC_3929 NC_017265.1 Protein Homology CDS 3781771 3782130 . - 0 ID=cds3432;Parent=gene3526;Dbxref=Genbank:WP_015683751.1;Name=WP_015683751.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_015683751.1;transl_table=11 NC_017265.1 RefSeq gene 3782238 3782888 . + . ID=gene3527;Name=YPC_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17675;old_locus_tag=YPC_3930 NC_017265.1 Protein Homology CDS 3782238 3782888 . + 0 ID=cds3433;Parent=gene3527;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11 NC_017265.1 RefSeq gene 3783134 3784147 . - . ID=gene3528;Name=YPC_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17680;old_locus_tag=YPC_3931 NC_017265.1 Protein Homology CDS 3783134 3784147 . - 0 ID=cds3434;Parent=gene3528;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11 NC_017265.1 RefSeq gene 3784553 3784768 . + . ID=gene3529;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YPC_RS17685;old_locus_tag=YPC_3933 NC_017265.1 Protein Homology CDS 3784553 3784768 . + 0 ID=cds3435;Parent=gene3529;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NC_017265.1 RefSeq gene 3784904 3786652 . + . ID=gene3530;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=YPC_RS17690;old_locus_tag=YPC_3934 NC_017265.1 Protein Homology CDS 3784904 3786652 . + 0 ID=cds3436;Parent=gene3530;Dbxref=Genbank:WP_002210358.1;Name=WP_002210358.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NC_017265.1 RefSeq gene 3786810 3788648 . + . ID=gene3531;Name=YPC_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17695;old_locus_tag=YPC_3935 NC_017265.1 Protein Homology CDS 3786810 3788648 . + 0 ID=cds3437;Parent=gene3531;Dbxref=Genbank:WP_002210359.1;Name=WP_002210359.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NC_017265.1 RefSeq gene 3788844 3788920 . + . ID=gene3532;Name=YPC_RS17700;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS17700;old_locus_tag=YPC_3936 NC_017265.1 tRNAscan-SE tRNA 3788844 3788920 . + . ID=rna88;Parent=gene3532;anticodon=(pos:3788878..3788880);gbkey=tRNA;product=tRNA-Met NC_017265.1 tRNAscan-SE exon 3788844 3788920 . + . ID=id302;Parent=rna88;anticodon=(pos:3788878..3788880);gbkey=tRNA;product=tRNA-Met NC_017265.1 RefSeq gene 3789166 3789504 . - . ID=gene3533;Name=YPC_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17705;old_locus_tag=YPC_3939 NC_017265.1 Protein Homology CDS 3789166 3789504 . - 0 ID=cds3438;Parent=gene3533;Dbxref=Genbank:WP_002217368.1;Name=WP_002217368.1;gbkey=CDS;product=terminase;protein_id=WP_002217368.1;transl_table=11 NC_017265.1 RefSeq gene 3789482 3789772 . - . ID=gene3534;Name=YPC_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17710;old_locus_tag=YPC_3940 NC_017265.1 Protein Homology CDS 3789482 3789772 . - 0 ID=cds3439;Parent=gene3534;Dbxref=Genbank:WP_002217366.1;Name=WP_002217366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217366.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3789564 3789784 . + . ID=id303;gbkey=repeat_region NC_017265.1 RefSeq gene 3789789 3790244 . - . ID=gene3535;Name=YPC_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17715;old_locus_tag=YPC_3941 NC_017265.1 Protein Homology CDS 3789789 3790244 . - 0 ID=cds3440;Parent=gene3535;Dbxref=Genbank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210360.1;transl_table=11 NC_017265.1 RefSeq gene 3790271 3790741 . - . ID=gene3536;Name=YPC_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17720;old_locus_tag=YPC_3942 NC_017265.1 Protein Homology CDS 3790271 3790741 . - 0 ID=cds3441;Parent=gene3536;Dbxref=Genbank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210361.1;transl_table=11 NC_017265.1 RefSeq gene 3790750 3792132 . - . ID=gene3537;Name=YPC_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17725;old_locus_tag=YPC_3943 NC_017265.1 Protein Homology CDS 3790750 3792132 . - 0 ID=cds3442;Parent=gene3537;Dbxref=Genbank:WP_002210362.1;Name=WP_002210362.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002210362.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3791699 3792251 . + . ID=id304;gbkey=repeat_region NC_017265.1 RefSeq gene 3792265 3792495 . - . ID=gene3538;Name=YPC_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17730;old_locus_tag=YPC_3944 NC_017265.1 Protein Homology CDS 3792265 3792495 . - 0 ID=cds3443;Parent=gene3538;Dbxref=Genbank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11 NC_017265.1 RefSeq gene 3792653 3792853 . + . ID=gene3539;Name=YPC_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17735 NC_017265.1 Protein Homology CDS 3792653 3792853 . + 0 ID=cds3444;Parent=gene3539;Dbxref=Genbank:WP_002214239.1;Name=WP_002214239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214239.1;transl_table=11 NC_017265.1 RefSeq gene 3793051 3793209 . + . ID=gene3540;Name=YPC_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17740;old_locus_tag=YPC_3945 NC_017265.1 Protein Homology CDS 3793051 3793209 . + 0 ID=cds3445;Parent=gene3540;Dbxref=Genbank:WP_002210363.1;Name=WP_002210363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210363.1;transl_table=11 NC_017265.1 RefSeq gene 3793206 3793418 . - . ID=gene3541;Name=YPC_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17745 NC_017265.1 Protein Homology CDS 3793206 3793418 . - 0 ID=cds3446;Parent=gene3541;Dbxref=Genbank:WP_002218980.1;Name=WP_002218980.1;gbkey=CDS;product=cell filamentation protein Fic;protein_id=WP_002218980.1;transl_table=11 NC_017265.1 RefSeq gene 3793514 3793717 . - . ID=gene3542;Name=YPC_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17750;old_locus_tag=YPC_3947 NC_017265.1 Protein Homology CDS 3793514 3793717 . - 0 ID=cds3447;Parent=gene3542;Dbxref=Genbank:WP_002210365.1;Name=WP_002210365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210365.1;transl_table=11 NC_017265.1 RefSeq gene 3794168 3795100 . - . ID=gene3543;Name=YPC_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17755;old_locus_tag=YPC_3948 NC_017265.1 Protein Homology CDS 3794168 3795100 . - 0 ID=cds3448;Parent=gene3543;Dbxref=Genbank:WP_002210366.1;Name=WP_002210366.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210366.1;transl_table=11 NC_017265.1 RefSeq gene 3795262 3795978 . + . ID=gene3544;Name=YPC_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17760;old_locus_tag=YPC_3949 NC_017265.1 Protein Homology CDS 3795262 3795978 . + 0 ID=cds3449;Parent=gene3544;Dbxref=Genbank:WP_002210367.1;Name=WP_002210367.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002210367.1;transl_table=11 NC_017265.1 RefSeq gene 3796238 3796540 . + . ID=gene3545;Name=YPC_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17765;old_locus_tag=YPC_3950 NC_017265.1 Protein Homology CDS 3796238 3796540 . + 0 ID=cds3450;Parent=gene3545;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NC_017265.1 RefSeq gene 3796755 3797159 . - . ID=gene3546;Name=YPC_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17770;old_locus_tag=YPC_3951 NC_017265.1 Protein Homology CDS 3796755 3797159 . - 0 ID=cds3451;Parent=gene3546;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11 NC_017265.1 RefSeq gene 3797444 3797824 . - . ID=gene3547;Name=YPC_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17775;old_locus_tag=YPC_3952 NC_017265.1 Protein Homology CDS 3797444 3797824 . - 0 ID=cds3452;Parent=gene3547;Dbxref=Genbank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210370.1;transl_table=11 NC_017265.1 RefSeq gene 3797840 3798466 . - . ID=gene3548;Name=YPC_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17780;old_locus_tag=YPC_3953 NC_017265.1 Protein Homology CDS 3797840 3798466 . - 0 ID=cds3453;Parent=gene3548;Dbxref=Genbank:WP_002214230.1;Name=WP_002214230.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002214230.1;transl_table=11 NC_017265.1 RefSeq gene 3798600 3799037 . - . ID=gene3549;Name=YPC_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17785;old_locus_tag=YPC_3954 NC_017265.1 Protein Homology CDS 3798600 3799037 . - 0 ID=cds3454;Parent=gene3549;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11 NC_017265.1 RefSeq gene 3799050 3800500 . - . ID=gene3550;Name=YPC_RS17790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS17790;pseudo=true NC_017265.1 Protein Homology CDS 3799050 3800500 . - 0 ID=cds3455;Parent=gene3550;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sodium:proton antiporter;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3800493 3801725 . - . ID=gene3551;Name=YPC_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17795;old_locus_tag=YPC_3957 NC_017265.1 Protein Homology CDS 3800493 3801725 . - 0 ID=cds3456;Parent=gene3551;Dbxref=Genbank:WP_002210373.1;Name=WP_002210373.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002210373.1;transl_table=11 NC_017265.1 RefSeq gene 3802211 3802318 . + . ID=gene3552;Name=YPC_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17800 NC_017265.1 Protein Homology CDS 3802211 3802318 . + 0 ID=cds3457;Parent=gene3552;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11 NC_017265.1 RefSeq gene 3802491 3802691 . + . ID=gene3553;Name=YPC_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17805;old_locus_tag=YPC_3958 NC_017265.1 Protein Homology CDS 3802491 3802691 . + 0 ID=cds3458;Parent=gene3553;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NC_017265.1 RefSeq gene 3802688 3803023 . + . ID=gene3554;Name=YPC_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17810;old_locus_tag=YPC_3959 NC_017265.1 Protein Homology CDS 3802688 3803023 . + 0 ID=cds3459;Parent=gene3554;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11 NC_017265.1 RefSeq gene 3803033 3804082 . + . ID=gene3555;Name=YPC_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17815;old_locus_tag=YPC_3960 NC_017265.1 Protein Homology CDS 3803033 3804082 . + 0 ID=cds3460;Parent=gene3555;Dbxref=Genbank:WP_002210376.1;Name=WP_002210376.1;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=WP_002210376.1;transl_table=11 NC_017265.1 RefSeq gene 3804066 3805967 . + . ID=gene3556;Name=YPC_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17820;old_locus_tag=YPC_3961 NC_017265.1 Protein Homology CDS 3804066 3805967 . + 0 ID=cds3461;Parent=gene3556;Dbxref=Genbank:WP_002210377.1;Name=WP_002210377.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_002210377.1;transl_table=11 NC_017265.1 RefSeq gene 3805972 3807498 . + . ID=gene3557;Name=YPC_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17825;old_locus_tag=YPC_3962 NC_017265.1 Protein Homology CDS 3805972 3807498 . + 0 ID=cds3462;Parent=gene3557;Dbxref=Genbank:WP_002214220.1;Name=WP_002214220.1;gbkey=CDS;product=transporter;protein_id=WP_002214220.1;transl_table=11 NC_017265.1 RefSeq gene 3807562 3809745 . - . ID=gene3558;Name=YPC_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17830;old_locus_tag=YPC_3963 NC_017265.1 Protein Homology CDS 3807562 3809745 . - 0 ID=cds3463;Parent=gene3558;Dbxref=Genbank:WP_002210379.1;Name=WP_002210379.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210379.1;transl_table=11 NC_017265.1 RefSeq gene 3809796 3810311 . - . ID=gene3559;Name=YPC_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17835;old_locus_tag=YPC_3964 NC_017265.1 Protein Homology CDS 3809796 3810311 . - 0 ID=cds3464;Parent=gene3559;Dbxref=Genbank:WP_002210380.1;Name=WP_002210380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210380.1;transl_table=11 NC_017265.1 RefSeq gene 3810308 3811126 . - . ID=gene3560;Name=YPC_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17840;old_locus_tag=YPC_3965 NC_017265.1 Protein Homology CDS 3810308 3811126 . - 0 ID=cds3465;Parent=gene3560;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11 NC_017265.1 RefSeq gene 3811126 3812007 . - . ID=gene3561;Name=YPC_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17845;old_locus_tag=YPC_3966 NC_017265.1 Protein Homology CDS 3811126 3812007 . - 0 ID=cds3466;Parent=gene3561;Dbxref=Genbank:WP_015683753.1;Name=WP_015683753.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_015683753.1;transl_table=11 NC_017265.1 RefSeq gene 3812061 3813305 . - . ID=gene3562;Name=YPC_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17850;old_locus_tag=YPC_3967 NC_017265.1 Protein Homology CDS 3812061 3813305 . - 0 ID=cds3467;Parent=gene3562;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11 NC_017265.1 RefSeq gene 3813382 3814368 . - . ID=gene3563;Name=YPC_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17855;old_locus_tag=YPC_3968 NC_017265.1 Protein Homology CDS 3813382 3814368 . - 0 ID=cds3468;Parent=gene3563;Dbxref=Genbank:WP_002210384.1;Name=WP_002210384.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210384.1;transl_table=11 NC_017265.1 RefSeq gene 3814477 3817830 . - . ID=gene3564;Name=YPC_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17860;old_locus_tag=YPC_3969 NC_017265.1 Protein Homology CDS 3814477 3817830 . - 0 ID=cds3469;Parent=gene3564;Dbxref=Genbank:WP_002214212.1;Name=WP_002214212.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214212.1;transl_table=11 NC_017265.1 RefSeq gene 3817913 3819028 . - . ID=gene3565;Name=YPC_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17865;old_locus_tag=YPC_3970 NC_017265.1 Protein Homology CDS 3817913 3819028 . - 0 ID=cds3470;Parent=gene3565;Dbxref=Genbank:WP_002353714.1;Name=WP_002353714.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002353714.1;transl_table=11 NC_017265.1 RefSeq gene 3819354 3820733 . + . ID=gene3566;Name=YPC_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17870;old_locus_tag=YPC_3971 NC_017265.1 Protein Homology CDS 3819354 3820733 . + 0 ID=cds3471;Parent=gene3566;Dbxref=Genbank:WP_002210387.1;Name=WP_002210387.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210387.1;transl_table=11 NC_017265.1 RefSeq gene 3820835 3821830 . + . ID=gene3567;Name=YPC_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17875;old_locus_tag=YPC_3972 NC_017265.1 Protein Homology CDS 3820835 3821830 . + 0 ID=cds3472;Parent=gene3567;Dbxref=Genbank:WP_002210388.1;Name=WP_002210388.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210388.1;transl_table=11 NC_017265.1 RefSeq gene 3821890 3824175 . + . ID=gene3568;Name=YPC_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17880;old_locus_tag=YPC_3973 NC_017265.1 Protein Homology CDS 3821890 3824175 . + 0 ID=cds3473;Parent=gene3568;Dbxref=Genbank:WP_002210389.1;Name=WP_002210389.1;gbkey=CDS;product=autotransporter;protein_id=WP_002210389.1;transl_table=11 NC_017265.1 RefSeq gene 3824443 3824607 . - . ID=gene3569;Name=YPC_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17885;old_locus_tag=YPC_3974 NC_017265.1 Protein Homology CDS 3824443 3824607 . - 0 ID=cds3474;Parent=gene3569;Dbxref=Genbank:WP_002228290.1;Name=WP_002228290.1;gbkey=CDS;product=adhesin;protein_id=WP_002228290.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3824494 3824637 . + . ID=id305;gbkey=repeat_region NC_017265.1 RefSeq gene 3824671 3825426 . - . ID=gene3570;Name=YPC_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17890;old_locus_tag=YPC_3975 NC_017265.1 Protein Homology CDS 3824671 3825426 . - 0 ID=cds3475;Parent=gene3570;Dbxref=Genbank:WP_002214952.1;Name=WP_002214952.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002214952.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3824674 3825421 . + . ID=id306;gbkey=repeat_region NC_017265.1 RefSeq gene 3825459 3825875 . - . ID=gene3571;Name=YPC_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17895;old_locus_tag=YPC_3976 NC_017265.1 Protein Homology CDS 3825459 3825875 . - 0 ID=cds3476;Parent=gene3571;Dbxref=Genbank:WP_002214951.1;Name=WP_002214951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214951.1;transl_table=11 NC_017265.1 RefSeq gene 3825971 3826198 . - . ID=gene3572;Name=YPC_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17900;old_locus_tag=YPC_3978 NC_017265.1 Protein Homology CDS 3825971 3826198 . - 0 ID=cds3477;Parent=gene3572;Dbxref=Genbank:WP_002214949.1;Name=WP_002214949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214949.1;transl_table=11 NC_017265.1 RefSeq gene 3826253 3826402 . - . ID=gene3573;Name=YPC_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17905;old_locus_tag=YPC_3979 NC_017265.1 Protein Homology CDS 3826253 3826402 . - 0 ID=cds3478;Parent=gene3573;Dbxref=Genbank:WP_002214947.1;Name=WP_002214947.1;gbkey=CDS;product=adhesin;protein_id=WP_002214947.1;transl_table=11 NC_017265.1 RefSeq gene 3826464 3826697 . - . ID=gene3574;Name=YPC_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17910 NC_017265.1 Protein Homology CDS 3826464 3826697 . - 0 ID=cds3479;Parent=gene3574;Dbxref=Genbank:WP_002214946.1;Name=WP_002214946.1;gbkey=CDS;product=immunity protein CdiI;protein_id=WP_002214946.1;transl_table=11 NC_017265.1 RefSeq gene 3826694 3836582 . - . ID=gene3575;Name=YPC_RS17915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS17915;old_locus_tag=YPC_3981;pseudo=true NC_017265.1 Protein Homology CDS 3826694 3836582 . - 0 ID=cds3480;Parent=gene3575;exception=annotated by transcript or proteomic data;gbkey=CDS;product=adhesin;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 3829962 3830105 . + . ID=id307;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 3830733 3831480 . + . ID=id308;gbkey=repeat_region NC_017265.1 RefSeq gene 3836627 3838315 . - . ID=gene3576;Name=YPC_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17920;old_locus_tag=YPC_3982 NC_017265.1 Protein Homology CDS 3836627 3838315 . - 0 ID=cds3481;Parent=gene3576;Dbxref=Genbank:WP_002210394.1;Name=WP_002210394.1;gbkey=CDS;product=outer membrane transporter CdiB;protein_id=WP_002210394.1;transl_table=11 NC_017265.1 RefSeq gene 3839030 3839668 . + . ID=gene3577;Name=YPC_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17925;old_locus_tag=YPC_3983 NC_017265.1 Protein Homology CDS 3839030 3839668 . + 0 ID=cds3482;Parent=gene3577;Dbxref=Genbank:WP_015683756.1;Name=WP_015683756.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_015683756.1;transl_table=11 NC_017265.1 RefSeq gene 3839701 3840342 . + . ID=gene3578;Name=YPC_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17930;old_locus_tag=YPC_3984 NC_017265.1 Protein Homology CDS 3839701 3840342 . + 0 ID=cds3483;Parent=gene3578;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11 NC_017265.1 RefSeq gene 3840344 3840982 . + . ID=gene3579;Name=YPC_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17935;old_locus_tag=YPC_3985 NC_017265.1 Protein Homology CDS 3840344 3840982 . + 0 ID=cds3484;Parent=gene3579;Dbxref=Genbank:WP_002228094.1;Name=WP_002228094.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002228094.1;transl_table=11 NC_017265.1 RefSeq gene 3841084 3842067 . + . ID=gene3580;Name=YPC_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17940;old_locus_tag=YPC_3986 NC_017265.1 Protein Homology CDS 3841084 3842067 . + 0 ID=cds3485;Parent=gene3580;Dbxref=Genbank:WP_002228095.1;Name=WP_002228095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228095.1;transl_table=11 NC_017265.1 RefSeq gene 3842123 3843856 . + . ID=gene3581;Name=YPC_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17945;old_locus_tag=YPC_3987 NC_017265.1 Protein Homology CDS 3842123 3843856 . + 0 ID=cds3486;Parent=gene3581;Dbxref=Genbank:WP_002210398.1;Name=WP_002210398.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210398.1;transl_table=11 NC_017265.1 RefSeq gene 3843888 3845387 . + . ID=gene3582;Name=YPC_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17950;old_locus_tag=YPC_3988 NC_017265.1 Protein Homology CDS 3843888 3845387 . + 0 ID=cds3487;Parent=gene3582;Dbxref=Genbank:WP_002210399.1;Name=WP_002210399.1;gbkey=CDS;product=kinase;protein_id=WP_002210399.1;transl_table=11 NC_017265.1 RefSeq gene 3845449 3845682 . - . ID=gene3583;Name=YPC_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17955 NC_017265.1 Protein Homology CDS 3845449 3845682 . - 0 ID=cds3488;Parent=gene3583;Dbxref=Genbank:WP_002214938.1;Name=WP_002214938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214938.1;transl_table=11 NC_017265.1 RefSeq gene 3845778 3846347 . + . ID=gene3584;Name=YPC_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17960;old_locus_tag=YPC_3989 NC_017265.1 Protein Homology CDS 3845778 3846347 . + 0 ID=cds3489;Parent=gene3584;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11 NC_017265.1 RefSeq gene 3846560 3848581 . + . ID=gene3585;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=YPC_RS17965;old_locus_tag=YPC_3991 NC_017265.1 Protein Homology CDS 3846560 3848581 . + 0 ID=cds3490;Parent=gene3585;Dbxref=Genbank:WP_002210401.1;Name=WP_002210401.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_002210401.1;transl_table=11 NC_017265.1 RefSeq gene 3848697 3849884 . - . ID=gene3586;Name=YPC_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17970;old_locus_tag=YPC_3992 NC_017265.1 Protein Homology CDS 3848697 3849884 . - 0 ID=cds3491;Parent=gene3586;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11 NC_017265.1 RefSeq gene 3850524 3853337 . + . ID=gene3587;Name=YPC_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17975;old_locus_tag=YPC_3993 NC_017265.1 Protein Homology CDS 3850524 3853337 . + 0 ID=cds3492;Parent=gene3587;Dbxref=Genbank:WP_002353701.1;Name=WP_002353701.1;gbkey=CDS;product=autotransporter;protein_id=WP_002353701.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3851865 3852205 . + . ID=id309;gbkey=repeat_region NC_017265.1 RefSeq gene 3853576 3854085 . + . ID=gene3588;Name=YPC_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17980;old_locus_tag=YPC_3994 NC_017265.1 Protein Homology CDS 3853576 3854085 . + 0 ID=cds3493;Parent=gene3588;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11 NC_017265.1 RefSeq gene 3854288 3855283 . + . ID=gene3589;Name=YPC_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17985;old_locus_tag=YPC_3995 NC_017265.1 Protein Homology CDS 3854288 3855283 . + 0 ID=cds3494;Parent=gene3589;Dbxref=Genbank:WP_015683757.1;Name=WP_015683757.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_015683757.1;transl_table=11 NC_017265.1 RefSeq gene 3855819 3857075 . + . ID=gene3590;Name=YPC_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17990;old_locus_tag=YPC_3996 NC_017265.1 Protein Homology CDS 3855819 3857075 . + 0 ID=cds3495;Parent=gene3590;Dbxref=Genbank:WP_015683758.1;Name=WP_015683758.1;gbkey=CDS;product=serine/threonine transporter;protein_id=WP_015683758.1;transl_table=11 NC_017265.1 RefSeq gene 3857116 3857286 . + . ID=gene3591;Name=YPC_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS17995 NC_017265.1 Protein Homology CDS 3857116 3857286 . + 0 ID=cds3496;Parent=gene3591;Dbxref=Genbank:WP_025470781.1;Name=WP_025470781.1;gbkey=CDS;product=transposase;protein_id=WP_025470781.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3857122 3857846 . + . ID=id310;gbkey=repeat_region NC_017265.1 RefSeq gene 3857276 3857734 . + . ID=gene3592;Name=YPC_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18000;old_locus_tag=YPC_3998 NC_017265.1 Protein Homology CDS 3857276 3857734 . + 0 ID=cds3497;Parent=gene3592;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3858269 3858490 . + . ID=gene3593;Name=YPC_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18005;old_locus_tag=YPC_4000 NC_017265.1 Protein Homology CDS 3858269 3858490 . + 0 ID=cds3498;Parent=gene3593;Dbxref=Genbank:WP_002210494.1;Name=WP_002210494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210494.1;transl_table=11 NC_017265.1 RefSeq gene 3858617 3859081 . + . ID=gene3594;Name=YPC_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18010;old_locus_tag=YPC_4001 NC_017265.1 Protein Homology CDS 3858617 3859081 . + 0 ID=cds3499;Parent=gene3594;Dbxref=Genbank:WP_002210493.1;Name=WP_002210493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210493.1;transl_table=11 NC_017265.1 RefSeq gene 3859171 3860040 . - . ID=gene3595;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YPC_RS18015;old_locus_tag=YPC_4002 NC_017265.1 Protein Homology CDS 3859171 3860040 . - 0 ID=cds3500;Parent=gene3595;Dbxref=Genbank:WP_002210492.1;Name=WP_002210492.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_002210492.1;transl_table=11 NC_017265.1 RefSeq gene 3860057 3860434 . - . ID=gene3596;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=YPC_RS18020;old_locus_tag=YPC_4003 NC_017265.1 Protein Homology CDS 3860057 3860434 . - 0 ID=cds3501;Parent=gene3596;Dbxref=Genbank:WP_002210491.1;Name=WP_002210491.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_002210491.1;transl_table=11 NC_017265.1 RefSeq gene 3860448 3861266 . - . ID=gene3597;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=YPC_RS18025;old_locus_tag=YPC_4004 NC_017265.1 Protein Homology CDS 3860448 3861266 . - 0 ID=cds3502;Parent=gene3597;Dbxref=Genbank:WP_002210490.1;Name=WP_002210490.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_002210490.1;transl_table=11 NC_017265.1 RefSeq gene 3861259 3862254 . - . ID=gene3598;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YPC_RS18030;old_locus_tag=YPC_4005 NC_017265.1 Protein Homology CDS 3861259 3862254 . - 0 ID=cds3503;Parent=gene3598;Dbxref=Genbank:WP_002210489.1;Name=WP_002210489.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_002210489.1;transl_table=11 NC_017265.1 RefSeq gene 3862238 3863542 . - . ID=gene3599;Name=YPC_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18035;old_locus_tag=YPC_4006 NC_017265.1 Protein Homology CDS 3862238 3863542 . - 0 ID=cds3504;Parent=gene3599;Dbxref=Genbank:WP_002210488.1;Name=WP_002210488.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_002210488.1;transl_table=11 NC_017265.1 RefSeq gene 3863610 3865952 . - . ID=gene3600;Name=YPC_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18040;old_locus_tag=YPC_4007 NC_017265.1 Protein Homology CDS 3863610 3865952 . - 0 ID=cds3505;Parent=gene3600;Dbxref=Genbank:WP_002228111.1;Name=WP_002228111.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_002228111.1;transl_table=11 NC_017265.1 RefSeq gene 3866137 3866970 . + . ID=gene3601;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YPC_RS18045;old_locus_tag=YPC_4008 NC_017265.1 Protein Homology CDS 3866137 3866970 . + 0 ID=cds3506;Parent=gene3601;Dbxref=Genbank:WP_002210486.1;Name=WP_002210486.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_002210486.1;transl_table=11 NC_017265.1 RefSeq gene 3867268 3867888 . - . ID=gene3602;Name=YPC_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18050;old_locus_tag=YPC_4009 NC_017265.1 Protein Homology CDS 3867268 3867888 . - 0 ID=cds3507;Parent=gene3602;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11 NC_017265.1 RefSeq gene 3869111 3869854 . - . ID=gene3603;Name=YPC_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18055;old_locus_tag=YPC_4010 NC_017265.1 Protein Homology CDS 3869111 3869854 . - 0 ID=cds3508;Parent=gene3603;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11 NC_017265.1 RefSeq gene 3870184 3871197 . + . ID=gene3604;Name=YPC_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18060;old_locus_tag=YPC_4011 NC_017265.1 Protein Homology CDS 3870184 3871197 . + 0 ID=cds3509;Parent=gene3604;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11 NC_017265.1 RefSeq gene 3871208 3871768 . + . ID=gene3605;Name=YPC_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18065;old_locus_tag=YPC_4012 NC_017265.1 Protein Homology CDS 3871208 3871768 . + 0 ID=cds3510;Parent=gene3605;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11 NC_017265.1 RefSeq gene 3871777 3873279 . + . ID=gene3606;Name=YPC_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18070;old_locus_tag=YPC_4013 NC_017265.1 Protein Homology CDS 3871777 3873279 . + 0 ID=cds3511;Parent=gene3606;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11 NC_017265.1 RefSeq gene 3873442 3873960 . + . ID=gene3607;Name=YPC_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18075;old_locus_tag=YPC_4014 NC_017265.1 Protein Homology CDS 3873442 3873960 . + 0 ID=cds3512;Parent=gene3607;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11 NC_017265.1 RefSeq gene 3874034 3874477 . + . ID=gene3608;Name=YPC_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18080;old_locus_tag=YPC_4015 NC_017265.1 Protein Homology CDS 3874034 3874477 . + 0 ID=cds3513;Parent=gene3608;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11 NC_017265.1 RefSeq gene 3874510 3876354 . + . ID=gene3609;Name=YPC_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18085;old_locus_tag=YPC_4016 NC_017265.1 Protein Homology CDS 3874510 3876354 . + 0 ID=cds3514;Parent=gene3609;Dbxref=Genbank:WP_002210477.1;Name=WP_002210477.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_002210477.1;transl_table=11 NC_017265.1 RefSeq gene 3876347 3877330 . + . ID=gene3610;Name=YPC_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18090;old_locus_tag=YPC_4017 NC_017265.1 Protein Homology CDS 3876347 3877330 . + 0 ID=cds3515;Parent=gene3610;Dbxref=Genbank:WP_002210476.1;Name=WP_002210476.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210476.1;transl_table=11 NC_017265.1 RefSeq gene 3877348 3879936 . + . ID=gene3611;Name=YPC_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18095;old_locus_tag=YPC_4018 NC_017265.1 Protein Homology CDS 3877348 3879936 . + 0 ID=cds3516;Parent=gene3611;Dbxref=Genbank:WP_002210475.1;Name=WP_002210475.1;gbkey=CDS;product=peptidase;protein_id=WP_002210475.1;transl_table=11 NC_017265.1 RefSeq gene 3880040 3882388 . + . ID=gene3612;Name=YPC_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18100;old_locus_tag=YPC_4019 NC_017265.1 Protein Homology CDS 3880040 3882388 . + 0 ID=cds3517;Parent=gene3612;Dbxref=Genbank:WP_002210474.1;Name=WP_002210474.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210474.1;transl_table=11 NC_017265.1 RefSeq gene 3882401 3884620 . + . ID=gene3613;Name=YPC_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18105;old_locus_tag=YPC_4020 NC_017265.1 Protein Homology CDS 3882401 3884620 . + 0 ID=cds3518;Parent=gene3613;Dbxref=Genbank:WP_002224087.1;Name=WP_002224087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224087.1;transl_table=11 NC_017265.1 RefSeq gene 3884646 3885749 . + . ID=gene3614;Name=YPC_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18110;old_locus_tag=YPC_4021 NC_017265.1 Protein Homology CDS 3884646 3885749 . + 0 ID=cds3519;Parent=gene3614;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11 NC_017265.1 RefSeq gene 3885742 3886359 . + . ID=gene3615;Name=YPC_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18115;old_locus_tag=YPC_4022 NC_017265.1 Protein Homology CDS 3885742 3886359 . + 0 ID=cds3520;Parent=gene3615;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11 NC_017265.1 RefSeq gene 3886365 3886730 . + . ID=gene3616;Name=YPC_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18120;old_locus_tag=YPC_4023 NC_017265.1 Protein Homology CDS 3886365 3886730 . + 0 ID=cds3521;Parent=gene3616;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11 NC_017265.1 RefSeq gene 3886723 3887214 . + . ID=gene3617;Name=YPC_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18125;old_locus_tag=YPC_4024 NC_017265.1 Protein Homology CDS 3886723 3887214 . + 0 ID=cds3522;Parent=gene3617;Dbxref=Genbank:WP_002210471.1;Name=WP_002210471.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210471.1;transl_table=11 NC_017265.1 RefSeq gene 3887334 3888689 . + . ID=gene3618;Name=YPC_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18130;old_locus_tag=YPC_4025 NC_017265.1 Protein Homology CDS 3887334 3888689 . + 0 ID=cds3523;Parent=gene3618;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11 NC_017265.1 RefSeq gene 3888686 3890294 . + . ID=gene3619;Name=YPC_RS18135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS18135;pseudo=true NC_017265.1 Protein Homology CDS 3888686 3890294 . + 0 ID=cds3524;Parent=gene3619;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 3890356 3893796 . + . ID=gene3620;Name=YPC_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18140;old_locus_tag=YPC_4028 NC_017265.1 Protein Homology CDS 3890356 3893796 . + 0 ID=cds3525;Parent=gene3620;Dbxref=Genbank:WP_042468664.1;Name=WP_042468664.1;gbkey=CDS;product=membrane protein;protein_id=WP_042468664.1;transl_table=11 NC_017265.1 RefSeq gene 3893818 3894171 . + . ID=gene3621;Name=YPC_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18145;old_locus_tag=YPC_4029 NC_017265.1 Protein Homology CDS 3893818 3894171 . + 0 ID=cds3526;Parent=gene3621;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3894214 3894384 . + . ID=id311;gbkey=repeat_region NC_017265.1 RefSeq gene 3894427 3897333 . - . ID=gene3622;Name=YPC_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18150;old_locus_tag=YPC_4031 NC_017265.1 Protein Homology CDS 3894427 3897333 . - 0 ID=cds3527;Parent=gene3622;Dbxref=Genbank:WP_002220588.1;Name=WP_002220588.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_002220588.1;transl_table=11 NC_017265.1 RefSeq gene 3897794 3900163 . - . ID=gene3623;Name=YPC_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18155;old_locus_tag=YPC_4032 NC_017265.1 Protein Homology CDS 3897794 3900163 . - 0 ID=cds3528;Parent=gene3623;Dbxref=Genbank:WP_002210466.1;Name=WP_002210466.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11 NC_017265.1 RefSeq gene 3900359 3901126 . + . ID=gene3624;Name=YPC_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18160;old_locus_tag=YPC_4033 NC_017265.1 Protein Homology CDS 3900359 3901126 . + 0 ID=cds3529;Parent=gene3624;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11 NC_017265.1 RefSeq gene 3901195 3901905 . - . ID=gene3625;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YPC_RS18165;old_locus_tag=YPC_4034 NC_017265.1 Protein Homology CDS 3901195 3901905 . - 0 ID=cds3530;Parent=gene3625;Dbxref=Genbank:WP_002210464.1;Name=WP_002210464.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_002210464.1;transl_table=11 NC_017265.1 RefSeq gene 3901892 3903499 . - . ID=gene3626;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YPC_RS18170;old_locus_tag=YPC_4035 NC_017265.1 Protein Homology CDS 3901892 3903499 . - 0 ID=cds3531;Parent=gene3626;Dbxref=Genbank:WP_002214276.1;Name=WP_002214276.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_002214276.1;transl_table=11 NC_017265.1 RefSeq gene 3903475 3904521 . - . ID=gene3627;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=YPC_RS18175;old_locus_tag=YPC_4036 NC_017265.1 Protein Homology CDS 3903475 3904521 . - 0 ID=cds3532;Parent=gene3627;Dbxref=Genbank:WP_002210462.1;Name=WP_002210462.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_002210462.1;transl_table=11 NC_017265.1 RefSeq gene 3905022 3905306 . + . ID=gene3628;Name=YPC_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18180 NC_017265.1 Protein Homology CDS 3905022 3905306 . + 0 ID=cds3533;Parent=gene3628;Dbxref=Genbank:WP_002214269.1;Name=WP_002214269.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214269.1;transl_table=11 NC_017265.1 RefSeq gene 3905407 3907068 . - . ID=gene3629;Name=YPC_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18185;old_locus_tag=YPC_4038 NC_017265.1 Protein Homology CDS 3905407 3907068 . - 0 ID=cds3534;Parent=gene3629;Dbxref=Genbank:WP_002210461.1;Name=WP_002210461.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210461.1;transl_table=11 NC_017265.1 RefSeq gene 3907306 3907479 . + . ID=gene3630;Name=YPC_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18190 NC_017265.1 Protein Homology CDS 3907306 3907479 . + 0 ID=cds3535;Parent=gene3630;Dbxref=Genbank:WP_002214268.1;Name=WP_002214268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214268.1;transl_table=11 NC_017265.1 RefSeq gene 3907732 3908913 . + . ID=gene3631;Name=YPC_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18195;old_locus_tag=YPC_4040 NC_017265.1 Protein Homology CDS 3907732 3908913 . + 0 ID=cds3536;Parent=gene3631;Dbxref=Genbank:WP_002224086.1;Name=WP_002224086.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002224086.1;transl_table=11 NC_017265.1 RefSeq gene 3909154 3909756 . - . ID=gene3632;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YPC_RS18200;old_locus_tag=YPC_4042 NC_017265.1 Protein Homology CDS 3909154 3909756 . - 0 ID=cds3537;Parent=gene3632;Dbxref=Genbank:WP_002210456.1;Name=WP_002210456.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NC_017265.1 RefSeq gene 3909771 3911201 . - . ID=gene3633;Name=YPC_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18205;old_locus_tag=YPC_4043 NC_017265.1 Protein Homology CDS 3909771 3911201 . - 0 ID=cds3538;Parent=gene3633;Dbxref=Genbank:WP_002210455.1;Name=WP_002210455.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11 NC_017265.1 RefSeq gene 3911203 3912294 . - . ID=gene3634;Name=YPC_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18210;old_locus_tag=YPC_4044 NC_017265.1 Protein Homology CDS 3911203 3912294 . - 0 ID=cds3539;Parent=gene3634;Dbxref=Genbank:WP_002210454.1;Name=WP_002210454.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_002210454.1;transl_table=11 NC_017265.1 RefSeq gene 3912297 3913859 . - . ID=gene3635;Name=YPC_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18215;old_locus_tag=YPC_4045 NC_017265.1 Protein Homology CDS 3912297 3913859 . - 0 ID=cds3540;Parent=gene3635;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3913893 3914618 . + . ID=id312;gbkey=repeat_region NC_017265.1 RefSeq gene 3914006 3914464 . - . ID=gene3636;Name=YPC_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18220;old_locus_tag=YPC_4046 NC_017265.1 Protein Homology CDS 3914006 3914464 . - 0 ID=cds3541;Parent=gene3636;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3914454 3914624 . - . ID=gene3637;Name=YPC_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18225 NC_017265.1 Protein Homology CDS 3914454 3914624 . - 0 ID=cds3542;Parent=gene3637;Dbxref=Genbank:WP_002216432.1;Name=WP_002216432.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216432.1;transl_table=11 NC_017265.1 RefSeq gene 3915786 3916742 . + . ID=gene3638;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YPC_RS18230;old_locus_tag=YPC_4049 NC_017265.1 Protein Homology CDS 3915786 3916742 . + 0 ID=cds3543;Parent=gene3638;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11 NC_017265.1 RefSeq gene 3917076 3917282 . + . ID=gene3639;Name=YPC_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18235 NC_017265.1 Protein Homology CDS 3917076 3917282 . + 0 ID=cds3544;Parent=gene3639;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11 NC_017265.1 RefSeq gene 3917279 3919084 . + . ID=gene3640;Name=YPC_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18240;old_locus_tag=YPC_4050 NC_017265.1 Protein Homology CDS 3917279 3919084 . + 0 ID=cds3545;Parent=gene3640;Dbxref=Genbank:WP_002216437.1;Name=WP_002216437.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002216437.1;transl_table=11 NC_017265.1 RefSeq gene 3919115 3919225 . + . ID=gene3641;Name=YPC_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18245 NC_017265.1 Protein Homology CDS 3919115 3919225 . + 0 ID=cds3546;Parent=gene3641;Dbxref=Genbank:WP_002228104.1;Name=WP_002228104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228104.1;transl_table=11 NC_017265.1 RefSeq gene 3919544 3921271 . + . ID=gene3642;Name=YPC_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18250;old_locus_tag=YPC_4051 NC_017265.1 Protein Homology CDS 3919544 3921271 . + 0 ID=cds3547;Parent=gene3642;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11 NC_017265.1 RefSeq gene 3921274 3921768 . + . ID=gene3643;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YPC_RS18255;old_locus_tag=YPC_4052 NC_017265.1 Protein Homology CDS 3921274 3921768 . + 0 ID=cds3548;Parent=gene3643;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3921816 3922537 . + . ID=id313;gbkey=repeat_region NC_017265.1 RefSeq gene 3921967 3922425 . + . ID=gene3644;Name=YPC_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18260;old_locus_tag=YPC_4054 NC_017265.1 Protein Homology CDS 3921967 3922425 . + 0 ID=cds3549;Parent=gene3644;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3922747 3922863 . - . ID=gene3645;Name=YPC_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18265 NC_017265.1 Protein Homology CDS 3922747 3922863 . - 0 ID=cds3550;Parent=gene3645;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11 NC_017265.1 RefSeq gene 3922930 3923940 . + . ID=gene3646;Name=YPC_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18270;old_locus_tag=YPC_4055 NC_017265.1 Protein Homology CDS 3922930 3923940 . + 0 ID=cds3551;Parent=gene3646;Dbxref=Genbank:WP_002210447.1;Name=WP_002210447.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210447.1;transl_table=11 NC_017265.1 RefSeq gene 3924071 3924511 . - . ID=gene3647;Name=YPC_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18275;old_locus_tag=YPC_4056 NC_017265.1 Protein Homology CDS 3924071 3924511 . - 0 ID=cds3552;Parent=gene3647;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3924872 3925044 . + . ID=id314;gbkey=repeat_region NC_017265.1 RefSeq gene 3925613 3926071 . + . ID=gene3648;Name=YPC_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18280;old_locus_tag=YPC_4058 NC_017265.1 Protein Homology CDS 3925613 3926071 . + 0 ID=cds3553;Parent=gene3648;Dbxref=Genbank:WP_002210443.1;Name=WP_002210443.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_002210443.1;transl_table=11 NC_017265.1 RefSeq gene 3926074 3927036 . + . ID=gene3649;Name=YPC_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18285;old_locus_tag=YPC_4059 NC_017265.1 Protein Homology CDS 3926074 3927036 . + 0 ID=cds3554;Parent=gene3649;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11 NC_017265.1 RefSeq gene 3927033 3927350 . + . ID=gene3650;Name=YPC_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18290;old_locus_tag=YPC_4060 NC_017265.1 Protein Homology CDS 3927033 3927350 . + 0 ID=cds3555;Parent=gene3650;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NC_017265.1 RefSeq gene 3927416 3929179 . + . ID=gene3651;Name=YPC_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18295;old_locus_tag=YPC_4061 NC_017265.1 Protein Homology CDS 3927416 3929179 . + 0 ID=cds3556;Parent=gene3651;Dbxref=Genbank:WP_002228284.1;Name=WP_002228284.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_002228284.1;transl_table=11 NC_017265.1 RefSeq gene 3929166 3930653 . + . ID=gene3652;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YPC_RS18300;old_locus_tag=YPC_4062 NC_017265.1 Protein Homology CDS 3929166 3930653 . + 0 ID=cds3557;Parent=gene3652;Dbxref=Genbank:WP_002210439.1;Name=WP_002210439.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_002210439.1;transl_table=11 NC_017265.1 RefSeq gene 3930650 3932026 . + . ID=gene3653;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YPC_RS18305;old_locus_tag=YPC_4063 NC_017265.1 Protein Homology CDS 3930650 3932026 . + 0 ID=cds3558;Parent=gene3653;Dbxref=Genbank:WP_002210438.1;Name=WP_002210438.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_002210438.1;transl_table=11 NC_017265.1 RefSeq gene 3932020 3933102 . + . ID=gene3654;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YPC_RS18310;old_locus_tag=YPC_4064 NC_017265.1 Protein Homology CDS 3932020 3933102 . + 0 ID=cds3559;Parent=gene3654;Dbxref=Genbank:WP_015683760.1;Name=WP_015683760.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_015683760.1;transl_table=11 NC_017265.1 RefSeq gene 3933105 3934421 . + . ID=gene3655;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YPC_RS18315;old_locus_tag=YPC_4065 NC_017265.1 Protein Homology CDS 3933105 3934421 . + 0 ID=cds3560;Parent=gene3655;Dbxref=Genbank:WP_002210436.1;Name=WP_002210436.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_002210436.1;transl_table=11 NC_017265.1 RefSeq gene 3934421 3935623 . + . ID=gene3656;Name=YPC_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18320;old_locus_tag=YPC_4066 NC_017265.1 Protein Homology CDS 3934421 3935623 . + 0 ID=cds3561;Parent=gene3656;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NC_017265.1 RefSeq gene 3935620 3936690 . + . ID=gene3657;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YPC_RS18325;old_locus_tag=YPC_4067 NC_017265.1 Protein Homology CDS 3935620 3936690 . + 0 ID=cds3562;Parent=gene3657;Dbxref=Genbank:WP_002210434.1;Name=WP_002210434.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_002210434.1;transl_table=11 NC_017265.1 RefSeq gene 3936828 3938303 . + . ID=gene3658;Name=YPC_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18330;old_locus_tag=YPC_4068 NC_017265.1 Protein Homology CDS 3936828 3938303 . + 0 ID=cds3563;Parent=gene3658;Dbxref=Genbank:WP_002216457.1;Name=WP_002216457.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11 NC_017265.1 RefSeq gene 3938296 3939216 . + . ID=gene3659;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=YPC_RS18335;old_locus_tag=YPC_4069 NC_017265.1 Protein Homology CDS 3938296 3939216 . + 0 ID=cds3564;Parent=gene3659;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NC_017265.1 RefSeq gene 3939218 3940045 . + . ID=gene3660;Name=YPC_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18340;old_locus_tag=YPC_4070 NC_017265.1 Protein Homology CDS 3939218 3940045 . + 0 ID=cds3565;Parent=gene3660;Dbxref=Genbank:WP_002228100.1;Name=WP_002228100.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_002228100.1;transl_table=11 NC_017265.1 RefSeq gene 3940072 3941328 . + . ID=gene3661;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YPC_RS18345;old_locus_tag=YPC_4071 NC_017265.1 Protein Homology CDS 3940072 3941328 . + 0 ID=cds3566;Parent=gene3661;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NC_017265.1 RefSeq gene 3941401 3942552 . + . ID=gene3662;Name=YPC_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18350;old_locus_tag=YPC_4072 NC_017265.1 Protein Homology CDS 3941401 3942552 . + 0 ID=cds3567;Parent=gene3662;Dbxref=Genbank:WP_002210430.1;Name=WP_002210430.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NC_017265.1 RefSeq gene 3942652 3943572 . + . ID=gene3663;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YPC_RS18355;old_locus_tag=YPC_4073 NC_017265.1 Protein Homology CDS 3942652 3943572 . + 0 ID=cds3568;Parent=gene3663;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NC_017265.1 RefSeq gene 3943739 3944263 . - . ID=gene3664;Name=YPC_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18360;old_locus_tag=YPC_4074 NC_017265.1 Protein Homology CDS 3943739 3944263 . - 0 ID=cds3569;Parent=gene3664;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11 NC_017265.1 RefSeq gene 3944292 3944825 . + . ID=gene3665;Name=YPC_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18365;old_locus_tag=YPC_4075 NC_017265.1 Protein Homology CDS 3944292 3944825 . + 0 ID=cds3570;Parent=gene3665;Dbxref=Genbank:WP_002210427.1;Name=WP_002210427.1;gbkey=CDS;product=secretion monitor;protein_id=WP_002210427.1;transl_table=11 NC_017265.1 RefSeq gene 3944903 3947617 . + . ID=gene3666;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=YPC_RS18370;old_locus_tag=YPC_4076 NC_017265.1 Protein Homology CDS 3944903 3947617 . + 0 ID=cds3571;Parent=gene3666;Dbxref=Genbank:WP_015683761.1;Name=WP_015683761.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=preprotein translocase subunit SecA;protein_id=WP_015683761.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3947660 3947835 . + . ID=id315;gbkey=repeat_region NC_017265.1 RefSeq gene 3947912 3948298 . + . ID=gene3667;Name=YPC_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18375;old_locus_tag=YPC_4078 NC_017265.1 Protein Homology CDS 3947912 3948298 . + 0 ID=cds3572;Parent=gene3667;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3948364 3950449 . + . ID=id316;gbkey=repeat_region NC_017265.1 RefSeq gene 3948560 3949339 . - . ID=gene3668;Name=YPC_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18380;old_locus_tag=YPC_4080 NC_017265.1 Protein Homology CDS 3948560 3949339 . - 0 ID=cds3573;Parent=gene3668;Dbxref=Genbank:WP_042468670.1;Name=WP_042468670.1;gbkey=CDS;product=transposase;protein_id=WP_042468670.1;transl_table=11 NC_017265.1 RefSeq gene 3949339 3950361 . - . ID=gene3669;Name=YPC_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18385;old_locus_tag=YPC_4081 NC_017265.1 Protein Homology CDS 3949339 3950361 . - 0 ID=cds3574;Parent=gene3669;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 3950375 3950554 . - . ID=gene3670;Name=YPC_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18390;old_locus_tag=YPC_4082 NC_017265.1 Protein Homology CDS 3950375 3950554 . - 0 ID=cds3575;Parent=gene3670;Dbxref=Genbank:WP_002210422.1;Name=WP_002210422.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002210422.1;transl_table=11 NC_017265.1 RefSeq gene 3950640 3951035 . - . ID=gene3671;Name=YPC_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18395;old_locus_tag=YPC_4083 NC_017265.1 Protein Homology CDS 3950640 3951035 . - 0 ID=cds3576;Parent=gene3671;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11 NC_017265.1 RefSeq gene 3951339 3951623 . - . ID=gene3672;Name=YPC_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18400;old_locus_tag=YPC_4084 NC_017265.1 Protein Homology CDS 3951339 3951623 . - 0 ID=cds3577;Parent=gene3672;Dbxref=Genbank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002210420.1;transl_table=11 NC_017265.1 RefSeq gene 3951620 3952015 . - . ID=gene3673;Name=YPC_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18405;old_locus_tag=YPC_4085 NC_017265.1 Protein Homology CDS 3951620 3952015 . - 0 ID=cds3578;Parent=gene3673;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11 NC_017265.1 RefSeq gene 3952018 3952323 . - . ID=gene3674;Name=YPC_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18410;old_locus_tag=YPC_4086 NC_017265.1 Protein Homology CDS 3952018 3952323 . - 0 ID=cds3579;Parent=gene3674;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11 NC_017265.1 RefSeq gene 3952328 3952474 . - . ID=gene3675;Name=YPC_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18415;old_locus_tag=YPC_4087 NC_017265.1 Protein Homology CDS 3952328 3952474 . - 0 ID=cds3580;Parent=gene3675;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11 NC_017265.1 RefSeq gene 3952478 3952858 . - . ID=gene3676;Name=YPC_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18420;old_locus_tag=YPC_4088 NC_017265.1 Protein Homology CDS 3952478 3952858 . - 0 ID=cds3581;Parent=gene3676;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11 NC_017265.1 RefSeq gene 3953084 3953473 . - . ID=gene3677;Name=YPC_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18425;old_locus_tag=YPC_4089 NC_017265.1 Protein Homology CDS 3953084 3953473 . - 0 ID=cds3582;Parent=gene3677;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11 NC_017265.1 RefSeq gene 3953470 3954168 . - . ID=gene3678;Name=YPC_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18430;old_locus_tag=YPC_4090 NC_017265.1 Protein Homology CDS 3953470 3954168 . - 0 ID=cds3583;Parent=gene3678;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11 NC_017265.1 RefSeq gene 3954446 3954979 . - . ID=gene3679;Name=YPC_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18435;old_locus_tag=YPC_4091 NC_017265.1 Protein Homology CDS 3954446 3954979 . - 0 ID=cds3584;Parent=gene3679;Dbxref=Genbank:WP_002218957.1;Name=WP_002218957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218957.1;transl_table=11 NC_017265.1 RefSeq gene 3955228 3956022 . - . ID=gene3680;Name=YPC_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18440;old_locus_tag=YPC_4092 NC_017265.1 Protein Homology CDS 3955228 3956022 . - 0 ID=cds3585;Parent=gene3680;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11 NC_017265.1 RefSeq gene 3956285 3957586 . - . ID=gene3681;Name=YPC_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18445;old_locus_tag=YPC_4093 NC_017265.1 Protein Homology CDS 3956285 3957586 . - 0 ID=cds3586;Parent=gene3681;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11 NC_017265.1 RefSeq gene 3957636 3957803 . + . ID=gene3682;Name=YPC_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18450 NC_017265.1 Protein Homology CDS 3957636 3957803 . + 0 ID=cds3587;Parent=gene3682;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11 NC_017265.1 RefSeq gene 3958334 3959743 . + . ID=gene3683;Name=YPC_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18455;old_locus_tag=YPC_4094 NC_017265.1 Protein Homology CDS 3958334 3959743 . + 0 ID=cds3588;Parent=gene3683;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11 NC_017265.1 RefSeq gene 3959942 3961393 . + . ID=gene3684;Name=YPC_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18460;old_locus_tag=YPC_4095 NC_017265.1 Protein Homology CDS 3959942 3961393 . + 0 ID=cds3589;Parent=gene3684;Dbxref=Genbank:WP_002210409.1;Name=WP_002210409.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_002210409.1;transl_table=11 NC_017265.1 RefSeq gene 3961404 3962894 . + . ID=gene3685;Name=YPC_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18465;old_locus_tag=YPC_4096 NC_017265.1 Protein Homology CDS 3961404 3962894 . + 0 ID=cds3590;Parent=gene3685;Dbxref=Genbank:WP_002210408.1;Name=WP_002210408.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_002210408.1;transl_table=11 NC_017265.1 RefSeq gene 3963048 3963578 . + . ID=gene3686;Name=YPC_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18470;old_locus_tag=YPC_4097 NC_017265.1 Protein Homology CDS 3963048 3963578 . + 0 ID=cds3591;Parent=gene3686;Dbxref=Genbank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210407.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3963585 3964304 . + . ID=id317;gbkey=repeat_region NC_017265.1 RefSeq gene 3963696 3964154 . - . ID=gene3687;Name=YPC_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18475;old_locus_tag=YPC_4098 NC_017265.1 Protein Homology CDS 3963696 3964154 . - 0 ID=cds3592;Parent=gene3687;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3964366 3964848 . - . ID=gene3688;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YPC_RS18480;old_locus_tag=YPC_4100 NC_017265.1 Protein Homology CDS 3964366 3964848 . - 0 ID=cds3593;Parent=gene3688;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NC_017265.1 RefSeq gene 3964998 3965453 . - . ID=gene3689;Name=YPC_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18485;old_locus_tag=YPC_4101 NC_017265.1 Protein Homology CDS 3964998 3965453 . - 0 ID=cds3594;Parent=gene3689;Dbxref=Genbank:WP_002210498.1;Name=WP_002210498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210498.1;transl_table=11 NC_017265.1 RefSeq gene 3965450 3966250 . - . ID=gene3690;Name=YPC_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18490;old_locus_tag=YPC_4102 NC_017265.1 Protein Homology CDS 3965450 3966250 . - 0 ID=cds3595;Parent=gene3690;Dbxref=Genbank:WP_002210499.1;Name=WP_002210499.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210499.1;transl_table=11 NC_017265.1 RefSeq gene 3966574 3967188 . + . ID=gene3691;Name=YPC_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18495;old_locus_tag=YPC_4103 NC_017265.1 Protein Homology CDS 3966574 3967188 . + 0 ID=cds3596;Parent=gene3691;Dbxref=Genbank:WP_002210501.1;Name=WP_002210501.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_002210501.1;transl_table=11 NC_017265.1 RefSeq gene 3967416 3970649 . - . ID=gene3692;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YPC_RS18500;old_locus_tag=YPC_4104 NC_017265.1 Protein Homology CDS 3967416 3970649 . - 0 ID=cds3597;Parent=gene3692;Dbxref=Genbank:WP_002210502.1;Name=WP_002210502.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large chain;protein_id=WP_002210502.1;transl_table=11 NC_017265.1 RefSeq gene 3970665 3971840 . - . ID=gene3693;Name=YPC_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18505;old_locus_tag=YPC_4105 NC_017265.1 Protein Homology CDS 3970665 3971840 . - 0 ID=cds3598;Parent=gene3693;Dbxref=Genbank:WP_002224759.1;Name=WP_002224759.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_002224759.1;transl_table=11 NC_017265.1 RefSeq gene 3972313 3973134 . - . ID=gene3694;Name=YPC_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18510;old_locus_tag=YPC_4106 NC_017265.1 Protein Homology CDS 3972313 3973134 . - 0 ID=cds3599;Parent=gene3694;Dbxref=Genbank:WP_002210504.1;Name=WP_002210504.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3973476 3974198 . + . ID=id318;gbkey=repeat_region NC_017265.1 RefSeq gene 3973587 3974045 . - . ID=gene3695;Name=YPC_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18515;old_locus_tag=YPC_4107 NC_017265.1 Protein Homology CDS 3973587 3974045 . - 0 ID=cds3600;Parent=gene3695;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 3974035 3974205 . - . ID=gene3696;Name=YPC_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18520 NC_017265.1 Protein Homology CDS 3974035 3974205 . - 0 ID=cds3601;Parent=gene3696;Dbxref=Genbank:WP_002216778.1;Name=WP_002216778.1;gbkey=CDS;product=invasin;protein_id=WP_002216778.1;transl_table=11 NC_017265.1 RefSeq repeat_region 3974214 3974351 . + . ID=id319;gbkey=repeat_region NC_017265.1 RefSeq gene 3974234 3974359 . - . ID=gene3697;Name=YPC_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18525 NC_017265.1 Protein Homology CDS 3974234 3974359 . - 0 ID=cds3602;Parent=gene3697;Dbxref=Genbank:WP_002210505.1;Name=WP_002210505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210505.1;transl_table=11 NC_017265.1 RefSeq gene 3974427 3975380 . - . ID=gene3698;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YPC_RS18530;old_locus_tag=YPC_4109 NC_017265.1 Protein Homology CDS 3974427 3975380 . - 0 ID=cds3603;Parent=gene3698;Dbxref=Genbank:WP_002210506.1;Name=WP_002210506.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002210506.1;transl_table=11 NC_017265.1 RefSeq gene 3975361 3975819 . - . ID=gene3699;Name=YPC_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18535 NC_017265.1 Protein Homology CDS 3975361 3975819 . - 0 ID=cds3604;Parent=gene3699;Dbxref=Genbank:WP_002228112.1;Name=WP_002228112.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NC_017265.1 RefSeq gene 3975887 3976396 . - . ID=gene3700;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YPC_RS18540 NC_017265.1 Protein Homology CDS 3975887 3976396 . - 0 ID=cds3605;Parent=gene3700;Dbxref=Genbank:WP_002210508.1;Name=WP_002210508.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_002210508.1;transl_table=11 NC_017265.1 RefSeq gene 3976396 3979212 . - . ID=gene3701;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YPC_RS18545;old_locus_tag=YPC_4112 NC_017265.1 Protein Homology CDS 3976396 3979212 . - 0 ID=cds3606;Parent=gene3701;Dbxref=Genbank:WP_002210509.1;Name=WP_002210509.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_002210509.1;transl_table=11 NC_017265.1 RefSeq gene 3979244 3980182 . - . ID=gene3702;Name=YPC_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18550;old_locus_tag=YPC_4113 NC_017265.1 Protein Homology CDS 3979244 3980182 . - 0 ID=cds3607;Parent=gene3702;Dbxref=Genbank:WP_002210510.1;Name=WP_002210510.1;gbkey=CDS;product=riboflavin biosynthesis protein RibF;protein_id=WP_002210510.1;transl_table=11 NC_017265.1 RefSeq gene 3980399 3980575 . + . ID=gene3703;Name=YPC_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18555 NC_017265.1 Protein Homology CDS 3980399 3980575 . + 0 ID=cds3608;Parent=gene3703;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11 NC_017265.1 RefSeq gene 3980597 3980860 . + . ID=gene3704;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YPC_RS18560;old_locus_tag=YPC_4114 NC_017265.1 Protein Homology CDS 3980597 3980860 . + 0 ID=cds3609;Parent=gene3704;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NC_017265.1 RefSeq gene 3980991 3981890 . - . ID=gene3705;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YPC_RS18565;old_locus_tag=YPC_4115 NC_017265.1 Protein Homology CDS 3980991 3981890 . - 0 ID=cds3610;Parent=gene3705;Dbxref=Genbank:WP_002220713.1;Name=WP_002220713.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_002220713.1;transl_table=11 NC_017265.1 RefSeq gene 3982020 3983204 . - . ID=gene3706;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=YPC_RS18570;old_locus_tag=YPC_4116 NC_017265.1 Protein Homology CDS 3982020 3983204 . - 0 ID=cds3611;Parent=gene3706;Dbxref=Genbank:WP_002220711.1;Name=WP_002220711.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_002220711.1;transl_table=11 NC_017265.1 RefSeq gene 3983447 3984586 . - . ID=gene3707;Name=YPC_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18575;old_locus_tag=YPC_4117 NC_017265.1 Protein Homology CDS 3983447 3984586 . - 0 ID=cds3612;Parent=gene3707;Dbxref=Genbank:WP_002209249.1;Name=WP_002209249.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NC_017265.1 RefSeq gene 3984698 3986608 . - . ID=gene3708;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YPC_RS18580;old_locus_tag=YPC_4118 NC_017265.1 Protein Homology CDS 3984698 3986608 . - 0 ID=cds3613;Parent=gene3708;Dbxref=Genbank:WP_002209248.1;Name=WP_002209248.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11 NC_017265.1 RefSeq gene 3986982 3987593 . + . ID=gene3709;Name=YPC_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18585;old_locus_tag=YPC_4119 NC_017265.1 Protein Homology CDS 3986982 3987593 . + 0 ID=cds3614;Parent=gene3709;Dbxref=Genbank:WP_002209246.1;Name=WP_002209246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209246.1;transl_table=11 NC_017265.1 RefSeq gene 3987882 3990329 . + . ID=gene3710;Name=YPC_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18590;old_locus_tag=YPC_4120 NC_017265.1 Protein Homology CDS 3987882 3990329 . + 0 ID=cds3615;Parent=gene3710;Dbxref=Genbank:WP_002209245.1;Name=WP_002209245.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_002209245.1;transl_table=11 NC_017265.1 RefSeq gene 3990399 3991787 . - . ID=gene3711;Name=YPC_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18595;old_locus_tag=YPC_4121 NC_017265.1 Protein Homology CDS 3990399 3991787 . - 0 ID=cds3616;Parent=gene3711;Dbxref=Genbank:WP_015683763.1;Name=WP_015683763.1;gbkey=CDS;product=MFS transporter;protein_id=WP_015683763.1;transl_table=11 NC_017265.1 RefSeq gene 3991915 3992502 . - . ID=gene3712;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=YPC_RS18600;old_locus_tag=YPC_4122 NC_017265.1 Protein Homology CDS 3991915 3992502 . - 0 ID=cds3617;Parent=gene3712;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11 NC_017265.1 RefSeq gene 3992790 3993743 . - . ID=gene3713;Name=YPC_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18605;old_locus_tag=YPC_4124 NC_017265.1 Protein Homology CDS 3992790 3993743 . - 0 ID=cds3618;Parent=gene3713;Dbxref=Genbank:WP_002209241.1;Name=WP_002209241.1;gbkey=CDS;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NC_017265.1 RefSeq gene 3994275 3995051 . + . ID=gene3714;Name=YPC_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18610;old_locus_tag=YPC_4126 NC_017265.1 Protein Homology CDS 3994275 3995051 . + 0 ID=cds3619;Parent=gene3714;Dbxref=Genbank:WP_015683764.1;Name=WP_015683764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683764.1;transl_table=11 NC_017265.1 RefSeq gene 3995868 3997157 . - . ID=gene3715;Name=YPC_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18615;old_locus_tag=YPC_4127 NC_017265.1 Protein Homology CDS 3995868 3997157 . - 0 ID=cds3620;Parent=gene3715;Dbxref=Genbank:WP_002209239.1;Name=WP_002209239.1;gbkey=CDS;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NC_017265.1 RefSeq gene 3997161 3998090 . - . ID=gene3716;Name=YPC_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18620;old_locus_tag=YPC_4128 NC_017265.1 Protein Homology CDS 3997161 3998090 . - 0 ID=cds3621;Parent=gene3716;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NC_017265.1 RefSeq gene 3998093 4000551 . - . ID=gene3717;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=pseudogene;locus_tag=YPC_RS18625;pseudo=true NC_017265.1 Protein Homology CDS 3998093 4000551 . - 0 ID=cds3622;Parent=gene3717;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=thrA;product=aspartate kinase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4001655 4002371 . + . ID=gene3718;Name=YPC_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18630;old_locus_tag=YPC_4132 NC_017265.1 Protein Homology CDS 4001655 4002371 . + 0 ID=cds3623;Parent=gene3718;Dbxref=Genbank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209234.1;transl_table=11 NC_017265.1 RefSeq gene 4002545 4003012 . - . ID=gene3719;Name=YPC_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18635;old_locus_tag=YPC_4133 NC_017265.1 Protein Homology CDS 4002545 4003012 . - 0 ID=cds3624;Parent=gene3719;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11 NC_017265.1 RefSeq gene 4003238 4004104 . + . ID=gene3720;Name=YPC_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18640;old_locus_tag=YPC_4134 NC_017265.1 Protein Homology CDS 4003238 4004104 . + 0 ID=cds3625;Parent=gene3720;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11 NC_017265.1 RefSeq gene 4004101 4004748 . - . ID=gene3721;Name=YPC_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18645;old_locus_tag=YPC_4135 NC_017265.1 Protein Homology CDS 4004101 4004748 . - 0 ID=cds3626;Parent=gene3721;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NC_017265.1 RefSeq gene 4004842 4005384 . + . ID=gene3722;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YPC_RS18650;old_locus_tag=YPC_4136 NC_017265.1 Protein Homology CDS 4004842 4005384 . + 0 ID=cds3627;Parent=gene3722;Dbxref=Genbank:WP_002209229.1;Name=WP_002209229.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_002209229.1;transl_table=11 NC_017265.1 RefSeq gene 4005381 4005773 . - . ID=gene3723;Name=YPC_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18655;old_locus_tag=YPC_4137 NC_017265.1 Protein Homology CDS 4005381 4005773 . - 0 ID=cds3628;Parent=gene3723;Dbxref=Genbank:WP_002209228.1;Name=WP_002209228.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NC_017265.1 RefSeq gene 4006028 4007947 . - . ID=gene3724;Name=YPC_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18660;old_locus_tag=YPC_4138 NC_017265.1 Protein Homology CDS 4006028 4007947 . - 0 ID=cds3629;Parent=gene3724;Dbxref=Genbank:WP_002209227.1;Name=WP_002209227.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002209227.1;transl_table=11 NC_017265.1 RefSeq gene 4008517 4011243 . + . ID=gene3725;Name=YPC_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18665;old_locus_tag=YPC_4139 NC_017265.1 Protein Homology CDS 4008517 4011243 . + 0 ID=cds3630;Parent=gene3725;Dbxref=Genbank:WP_002209226.1;Name=WP_002209226.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_002209226.1;transl_table=11 NC_017265.1 RefSeq gene 4011618 4012241 . + . ID=gene3726;Name=YPC_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18670;old_locus_tag=YPC_4140 NC_017265.1 Protein Homology CDS 4011618 4012241 . + 0 ID=cds3631;Parent=gene3726;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11 NC_017265.1 RefSeq gene 4012238 4013515 . + . ID=gene3727;Name=YPC_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18675;old_locus_tag=YPC_4141 NC_017265.1 Protein Homology CDS 4012238 4013515 . + 0 ID=cds3632;Parent=gene3727;Dbxref=Genbank:WP_002223940.1;Name=WP_002223940.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002223940.1;transl_table=11 NC_017265.1 RefSeq gene 4013521 4014027 . + . ID=gene3728;Name=YPC_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18680;old_locus_tag=YPC_4142 NC_017265.1 Protein Homology CDS 4013521 4014027 . + 0 ID=cds3633;Parent=gene3728;Dbxref=Genbank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215967.1;transl_table=11 NC_017265.1 RefSeq gene 4014231 4015873 . + . ID=gene3729;Name=YPC_RS18685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS18685;pseudo=true NC_017265.1 Protein Homology CDS 4014231 4015873 . + 0 ID=cds3634;Parent=gene3729;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4016019 4017149 . - . ID=gene3730;Name=YPC_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18690;old_locus_tag=YPC_4145 NC_017265.1 Protein Homology CDS 4016019 4017149 . - 0 ID=cds3635;Parent=gene3730;Dbxref=Genbank:WP_002218755.1;Name=WP_002218755.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_002218755.1;transl_table=11 NC_017265.1 RefSeq gene 4017306 4018577 . - . ID=gene3731;Name=YPC_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18695;old_locus_tag=YPC_4146 NC_017265.1 Protein Homology CDS 4017306 4018577 . - 0 ID=cds3636;Parent=gene3731;Dbxref=Genbank:WP_002209221.1;Name=WP_002209221.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_002209221.1;transl_table=11 NC_017265.1 RefSeq gene 4018736 4020118 . - . ID=gene3732;Name=YPC_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18700;old_locus_tag=YPC_4147 NC_017265.1 Protein Homology CDS 4018736 4020118 . - 0 ID=cds3637;Parent=gene3732;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NC_017265.1 RefSeq gene 4020206 4021186 . - . ID=gene3733;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YPC_RS18705;old_locus_tag=YPC_4148 NC_017265.1 Protein Homology CDS 4020206 4021186 . - 0 ID=cds3638;Parent=gene3733;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NC_017265.1 RefSeq gene 4021418 4022119 . + . ID=gene3734;Name=YPC_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18710;old_locus_tag=YPC_4150 NC_017265.1 Protein Homology CDS 4021418 4022119 . + 0 ID=cds3639;Parent=gene3734;Dbxref=Genbank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;product=protein Smp;protein_id=WP_002209218.1;transl_table=11 NC_017265.1 RefSeq gene 4022231 4022950 . - . ID=gene3735;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YPC_RS18715;old_locus_tag=YPC_4151 NC_017265.1 Protein Homology CDS 4022231 4022950 . - 0 ID=cds3640;Parent=gene3735;Dbxref=Genbank:WP_011191689.1;Name=WP_011191689.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_011191689.1;transl_table=11 NC_017265.1 RefSeq gene 4023075 4024298 . - . ID=gene3736;Name=YPC_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18720;old_locus_tag=YPC_4152 NC_017265.1 Protein Homology CDS 4023075 4024298 . - 0 ID=cds3641;Parent=gene3736;Dbxref=Genbank:WP_002209216.1;Name=WP_002209216.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_002209216.1;transl_table=11 NC_017265.1 RefSeq gene 4024430 4025209 . - . ID=gene3737;Name=YPC_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18725 NC_017265.1 Protein Homology CDS 4024430 4025209 . - 0 ID=cds3642;Parent=gene3737;Dbxref=Genbank:WP_002231521.1;Name=WP_002231521.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002231521.1;transl_table=11 NC_017265.1 RefSeq gene 4025206 4025748 . - . ID=gene3738;Name=YPC_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18730 NC_017265.1 Protein Homology CDS 4025206 4025748 . - 0 ID=cds3643;Parent=gene3738;Dbxref=Genbank:WP_002353659.1;Name=WP_002353659.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002353659.1;transl_table=11 NC_017265.1 RefSeq gene 4025869 4026666 . - . ID=gene3739;Name=YPC_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18735;old_locus_tag=YPC_4155 NC_017265.1 Protein Homology CDS 4025869 4026666 . - 0 ID=cds3644;Parent=gene3739;Dbxref=Genbank:WP_002216078.1;Name=WP_002216078.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase 2;protein_id=WP_002216078.1;transl_table=11 NC_017265.1 RefSeq gene 4027274 4028551 . - . ID=gene3740;Name=YPC_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18740;old_locus_tag=YPC_4157 NC_017265.1 Protein Homology CDS 4027274 4028551 . - 0 ID=cds3645;Parent=gene3740;Dbxref=Genbank:WP_032465614.1;Name=WP_032465614.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_032465614.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4028717 4028888 . + . ID=id320;gbkey=repeat_region NC_017265.1 RefSeq gene 4029080 4029869 . - . ID=gene3741;Name=YPC_RS18745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS18745;pseudo=true NC_017265.1 Protein Homology CDS 4029080 4029869 . - 0 ID=cds3646;Parent=gene3741;exception=annotated by transcript or proteomic data;gbkey=CDS;product=deoxyribonuclease YjjV;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4029906 4031176 . - . ID=gene3742;Name=YPC_RS18750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS18750;old_locus_tag=YPC_4161;pseudo=true NC_017265.1 Protein Homology CDS 4029906 4031176 . - 0 ID=cds3647;Parent=gene3742;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4031253 4031414 . - . ID=gene3743;Name=YPC_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18755;old_locus_tag=YPC_4163 NC_017265.1 Protein Homology CDS 4031253 4031414 . - 0 ID=cds3648;Parent=gene3743;Dbxref=Genbank:WP_002209211.1;Name=WP_002209211.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209211.1;transl_table=11 NC_017265.1 RefSeq gene 4031581 4032195 . - . ID=gene3744;Name=YPC_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18760;old_locus_tag=YPC_4164 NC_017265.1 Protein Homology CDS 4031581 4032195 . - 0 ID=cds3649;Parent=gene3744;Dbxref=Genbank:WP_002209210.1;Name=WP_002209210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209210.1;transl_table=11 NC_017265.1 RefSeq gene 4032522 4034111 . - . ID=gene3745;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YPC_RS18765;old_locus_tag=YPC_4165 NC_017265.1 Protein Homology CDS 4032522 4034111 . - 0 ID=cds3650;Parent=gene3745;Dbxref=Genbank:WP_002209209.1;Name=WP_002209209.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_002209209.1;transl_table=11 NC_017265.1 RefSeq gene 4034290 4034733 . - . ID=gene3746;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YPC_RS18770;old_locus_tag=YPC_4166 NC_017265.1 Protein Homology CDS 4034290 4034733 . - 0 ID=cds3651;Parent=gene3746;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NC_017265.1 RefSeq gene 4034678 4035115 . - . ID=gene3747;Name=YPC_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18775;old_locus_tag=YPC_4167 NC_017265.1 Protein Homology CDS 4034678 4035115 . - 0 ID=cds3652;Parent=gene3747;Dbxref=Genbank:WP_002209207.1;Name=WP_002209207.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_002209207.1;transl_table=11 NC_017265.1 RefSeq gene 4035228 4036272 . + . ID=gene3748;Name=YPC_RS18780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS18780;pseudo=true NC_017265.1 Protein Homology CDS 4035228 4036272 . + 0 ID=cds3653;Parent=gene3748;exception=annotated by transcript or proteomic data;gbkey=CDS;product=16S rRNA methyltransferase;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4036529 4036615 . + . ID=gene3749;Name=YPC_RS18785;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS18785;old_locus_tag=YPC_4171 NC_017265.1 tRNAscan-SE tRNA 4036529 4036615 . + . ID=rna89;Parent=gene3749;anticodon=(pos:4036563..4036565);gbkey=tRNA;product=tRNA-Leu NC_017265.1 tRNAscan-SE exon 4036529 4036615 . + . ID=id321;Parent=rna89;anticodon=(pos:4036563..4036565);gbkey=tRNA;product=tRNA-Leu NC_017265.1 RefSeq gene 4036785 4037117 . - . ID=gene3750;Name=YPC_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18790 NC_017265.1 Protein Homology CDS 4036785 4037117 . - 0 ID=cds3654;Parent=gene3750;Dbxref=Genbank:WP_002215232.1;Name=WP_002215232.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215232.1;transl_table=11 NC_017265.1 RefSeq gene 4037366 4038538 . + . ID=gene3751;Name=YPC_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18795;old_locus_tag=YPC_4173 NC_017265.1 Protein Homology CDS 4037366 4038538 . + 0 ID=cds3655;Parent=gene3751;Dbxref=Genbank:WP_002209204.1;Name=WP_002209204.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209204.1;transl_table=11 NC_017265.1 RefSeq gene 4039079 4040164 . - . ID=gene3752;Name=YPC_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18800;old_locus_tag=YPC_4175 NC_017265.1 Protein Homology CDS 4039079 4040164 . - 0 ID=cds3656;Parent=gene3752;Dbxref=Genbank:WP_002209202.1;Name=WP_002209202.1;gbkey=CDS;product=pectinesterase;protein_id=WP_002209202.1;transl_table=11 NC_017265.1 RefSeq gene 4040497 4040820 . + . ID=gene3753;Name=YPC_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18805;old_locus_tag=YPC_4177 NC_017265.1 Protein Homology CDS 4040497 4040820 . + 0 ID=cds3657;Parent=gene3753;Dbxref=Genbank:WP_002353658.1;Name=WP_002353658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002353658.1;transl_table=11 NC_017265.1 RefSeq gene 4041003 4041299 . + . ID=gene3754;Name=YPC_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18810;old_locus_tag=YPC_4178 NC_017265.1 Protein Homology CDS 4041003 4041299 . + 0 ID=cds3658;Parent=gene3754;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NC_017265.1 RefSeq gene 4041433 4041624 . + . ID=gene3755;Name=YPC_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18815 NC_017265.1 Protein Homology CDS 4041433 4041624 . + 0 ID=cds3659;Parent=gene3755;Dbxref=Genbank:WP_016256142.1;Name=WP_016256142.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256142.1;transl_table=11 NC_017265.1 RefSeq gene 4041660 4044746 . - . ID=gene3756;Name=YPC_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18820;old_locus_tag=YPC_4179 NC_017265.1 Protein Homology CDS 4041660 4044746 . - 0 ID=cds3660;Parent=gene3756;Dbxref=Genbank:WP_002209200.1;Name=WP_002209200.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_002209200.1;transl_table=11 NC_017265.1 RefSeq gene 4044746 4045828 . - . ID=gene3757;Name=YPC_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18825;old_locus_tag=YPC_4180 NC_017265.1 Protein Homology CDS 4044746 4045828 . - 0 ID=cds3661;Parent=gene3757;Dbxref=Genbank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209199.1;transl_table=11 NC_017265.1 RefSeq gene 4045880 4046113 . - . ID=gene3758;Name=YPC_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18830;old_locus_tag=YPC_4181 NC_017265.1 Protein Homology CDS 4045880 4046113 . - 0 ID=cds3662;Parent=gene3758;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11 NC_017265.1 RefSeq gene 4046140 4046337 . - . ID=gene3759;Name=YPC_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22065;old_locus_tag=YPC_4182 NC_017265.1 Protein Homology CDS 4046140 4046337 . - 0 ID=cds3663;Parent=gene3759;Dbxref=Genbank:WP_002215224.1;Name=WP_002215224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215224.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4046735 4046903 . + . ID=id322;gbkey=repeat_region NC_017265.1 RefSeq gene 4046923 4048155 . - . ID=gene3760;Name=YPC_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18840;old_locus_tag=YPC_4183 NC_017265.1 Protein Homology CDS 4046923 4048155 . - 0 ID=cds3664;Parent=gene3760;Dbxref=Genbank:WP_002209197.1;Name=WP_002209197.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_002209197.1;transl_table=11 NC_017265.1 RefSeq gene 4048203 4049366 . - . ID=gene3761;Name=YPC_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18845;old_locus_tag=YPC_4184 NC_017265.1 Protein Homology CDS 4048203 4049366 . - 0 ID=cds3665;Parent=gene3761;Dbxref=Genbank:WP_002209196.1;Name=WP_002209196.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002209196.1;transl_table=11 NC_017265.1 RefSeq gene 4049712 4051304 . - . ID=gene3762;Name=YPC_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18850;old_locus_tag=YPC_4186 NC_017265.1 Protein Homology CDS 4049712 4051304 . - 0 ID=cds3666;Parent=gene3762;Dbxref=Genbank:WP_002209194.1;Name=WP_002209194.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002209194.1;transl_table=11 NC_017265.1 RefSeq gene 4051475 4052462 . - . ID=gene3763;Name=YPC_RS18855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS18855;pseudo=true NC_017265.1 Protein Homology CDS 4051475 4052462 . - 0 ID=cds3667;Parent=gene3763;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator LsrR;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4052491 4052697 . + . ID=gene3764;Name=YPC_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18860 NC_017265.1 Protein Homology CDS 4052491 4052697 . + 0 ID=cds3668;Parent=gene3764;Dbxref=Genbank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;product=membrane protein;protein_id=WP_002221620.1;transl_table=11 NC_017265.1 RefSeq gene 4052807 4054390 . + . ID=gene3765;Name=YPC_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18865;old_locus_tag=YPC_4190 NC_017265.1 Protein Homology CDS 4052807 4054390 . + 0 ID=cds3669;Parent=gene3765;Dbxref=Genbank:WP_002209192.1;Name=WP_002209192.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_002209192.1;transl_table=11 NC_017265.1 RefSeq gene 4054384 4055439 . + . ID=gene3766;Name=YPC_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18870;old_locus_tag=YPC_4191 NC_017265.1 Protein Homology CDS 4054384 4055439 . + 0 ID=cds3670;Parent=gene3766;Dbxref=Genbank:WP_002209191.1;Name=WP_002209191.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_002209191.1;transl_table=11 NC_017265.1 RefSeq gene 4055436 4056436 . + . ID=gene3767;Name=YPC_RS18875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS18875;pseudo=true NC_017265.1 Protein Homology CDS 4055436 4056436 . + 0 ID=cds3671;Parent=gene3767;Note=with IsrABC is involved with autoinducer 2 import;exception=annotated by transcript or proteomic data;gbkey=CDS;product=autoinducer 2 import system permease LsrD;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4056495 4057514 . + . ID=gene3768;Name=YPC_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18880;old_locus_tag=YPC_4194 NC_017265.1 Protein Homology CDS 4056495 4057514 . + 0 ID=cds3672;Parent=gene3768;Dbxref=Genbank:WP_002209189.1;Name=WP_002209189.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_002209189.1;transl_table=11 NC_017265.1 RefSeq gene 4057570 4058445 . + . ID=gene3769;Name=YPC_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18885;old_locus_tag=YPC_4195 NC_017265.1 Protein Homology CDS 4057570 4058445 . + 0 ID=cds3673;Parent=gene3769;Dbxref=Genbank:WP_002209188.1;Name=WP_002209188.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_002209188.1;transl_table=11 NC_017265.1 RefSeq gene 4058509 4058799 . + . ID=gene3770;Name=YPC_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18890;old_locus_tag=YPC_4196 NC_017265.1 Protein Homology CDS 4058509 4058799 . + 0 ID=cds3674;Parent=gene3770;Dbxref=Genbank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002209186.1;transl_table=11 NC_017265.1 RefSeq gene 4059099 4059590 . + . ID=gene3771;Name=YPC_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18895;old_locus_tag=YPC_4198 NC_017265.1 Protein Homology CDS 4059099 4059590 . + 0 ID=cds3675;Parent=gene3771;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11 NC_017265.1 RefSeq gene 4059652 4062210 . - . ID=gene3772;Name=YPC_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18900;old_locus_tag=YPC_4199 NC_017265.1 Protein Homology CDS 4059652 4062210 . - 0 ID=cds3676;Parent=gene3772;Dbxref=Genbank:WP_015683768.1;Name=WP_015683768.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_015683768.1;transl_table=11 NC_017265.1 RefSeq gene 4062575 4063657 . + . ID=gene3773;Name=YPC_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18905;old_locus_tag=YPC_4200 NC_017265.1 Protein Homology CDS 4062575 4063657 . + 0 ID=cds3677;Parent=gene3773;Dbxref=Genbank:WP_002209182.1;Name=WP_002209182.1;gbkey=CDS;product=PTS fructose transporter subunit IIC;protein_id=WP_002209182.1;transl_table=11 NC_017265.1 RefSeq gene 4063998 4064318 . + . ID=gene3774;Name=YPC_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18910;old_locus_tag=YPC_4201 NC_017265.1 Protein Homology CDS 4063998 4064318 . + 0 ID=cds3678;Parent=gene3774;Dbxref=Genbank:WP_002209181.1;Name=WP_002209181.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NC_017265.1 RefSeq gene 4064411 4064755 . + . ID=gene3775;Name=YPC_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18915;old_locus_tag=YPC_4202 NC_017265.1 Protein Homology CDS 4064411 4064755 . + 0 ID=cds3679;Parent=gene3775;Dbxref=Genbank:WP_002209180.1;Name=WP_002209180.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11 NC_017265.1 RefSeq gene 4064748 4065623 . - . ID=gene3776;Name=YPC_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18920;old_locus_tag=YPC_4203 NC_017265.1 Protein Homology CDS 4064748 4065623 . - 0 ID=cds3680;Parent=gene3776;Dbxref=Genbank:WP_002209179.1;Name=WP_002209179.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209179.1;transl_table=11 NC_017265.1 RefSeq gene 4065625 4066161 . - . ID=gene3777;Name=YPC_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18925;old_locus_tag=YPC_4204 NC_017265.1 Protein Homology CDS 4065625 4066161 . - 0 ID=cds3681;Parent=gene3777;Dbxref=Genbank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11 NC_017265.1 RefSeq gene 4066867 4068063 . + . ID=gene3778;Name=YPC_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18930;old_locus_tag=YPC_4205 NC_017265.1 Protein Homology CDS 4066867 4068063 . + 0 ID=cds3682;Parent=gene3778;Dbxref=Genbank:WP_002209177.1;Name=WP_002209177.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209177.1;transl_table=11 NC_017265.1 RefSeq gene 4068074 4069120 . + . ID=gene3779;Name=YPC_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18935;old_locus_tag=YPC_4206 NC_017265.1 Protein Homology CDS 4068074 4069120 . + 0 ID=cds3683;Parent=gene3779;Dbxref=Genbank:WP_002209176.1;Name=WP_002209176.1;gbkey=CDS;product=peptidase M48;protein_id=WP_002209176.1;transl_table=11 NC_017265.1 RefSeq gene 4069129 4069254 . + . ID=gene3780;Name=YPC_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18940;old_locus_tag=YPC_4207 NC_017265.1 Protein Homology CDS 4069129 4069254 . + 0 ID=cds3684;Parent=gene3780;Dbxref=Genbank:WP_002209175.1;Name=WP_002209175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209175.1;transl_table=11 NC_017265.1 RefSeq gene 4069266 4070420 . - . ID=gene3781;Name=YPC_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18945;old_locus_tag=YPC_4208 NC_017265.1 Protein Homology CDS 4069266 4070420 . - 0 ID=cds3685;Parent=gene3781;Dbxref=Genbank:WP_002209174.1;Name=WP_002209174.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209174.1;transl_table=11 NC_017265.1 RefSeq gene 4070417 4071805 . - . ID=gene3782;Name=YPC_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18950;old_locus_tag=YPC_4209 NC_017265.1 Protein Homology CDS 4070417 4071805 . - 0 ID=cds3686;Parent=gene3782;Dbxref=Genbank:WP_002209173.1;Name=WP_002209173.1;gbkey=CDS;product=ATPase involved in DNA repair;protein_id=WP_002209173.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4071769 4071931 . + . ID=id323;gbkey=repeat_region NC_017265.1 RefSeq gene 4071911 4072006 . - . ID=gene3783;Name=YPC_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18955 NC_017265.1 Protein Homology CDS 4071911 4072006 . - 0 ID=cds3687;Parent=gene3783;Dbxref=Genbank:WP_002215302.1;Name=WP_002215302.1;gbkey=CDS;product=transposase;protein_id=WP_002215302.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4071946 4072108 . + . ID=id324;gbkey=repeat_region NC_017265.1 RefSeq gene 4072047 4072244 . + . ID=gene3784;Name=YPC_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18960;old_locus_tag=YPC_4210 NC_017265.1 Protein Homology CDS 4072047 4072244 . + 0 ID=cds3688;Parent=gene3784;Dbxref=Genbank:WP_002209172.1;Name=WP_002209172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209172.1;transl_table=11 NC_017265.1 RefSeq gene 4072446 4072733 . + . ID=gene3785;Name=YPC_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18965;old_locus_tag=YPC_4211 NC_017265.1 Protein Homology CDS 4072446 4072733 . + 0 ID=cds3689;Parent=gene3785;Dbxref=Genbank:WP_002215301.1;Name=WP_002215301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215301.1;transl_table=11 NC_017265.1 RefSeq gene 4073077 4074450 . - . ID=gene3786;Name=YPC_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18970;old_locus_tag=YPC_4212 NC_017265.1 Protein Homology CDS 4073077 4074450 . - 0 ID=cds3690;Parent=gene3786;Dbxref=Genbank:WP_002209171.1;Name=WP_002209171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209171.1;transl_table=11 NC_017265.1 RefSeq gene 4074422 4075144 . - . ID=gene3787;Name=YPC_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18975;old_locus_tag=YPC_4213 NC_017265.1 Protein Homology CDS 4074422 4075144 . - 0 ID=cds3691;Parent=gene3787;Dbxref=Genbank:WP_002209170.1;Name=WP_002209170.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209170.1;transl_table=11 NC_017265.1 RefSeq gene 4075194 4076519 . - . ID=gene3788;Name=YPC_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18980;old_locus_tag=YPC_4214 NC_017265.1 Protein Homology CDS 4075194 4076519 . - 0 ID=cds3692;Parent=gene3788;Dbxref=Genbank:WP_002209169.1;Name=WP_002209169.1;gbkey=CDS;product=restriction endonuclease subunit M;protein_id=WP_002209169.1;transl_table=11 NC_017265.1 RefSeq gene 4076658 4076921 . + . ID=gene3789;Name=YPC_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18985;old_locus_tag=YPC_4215 NC_017265.1 Protein Homology CDS 4076658 4076921 . + 0 ID=cds3693;Parent=gene3789;Dbxref=Genbank:WP_002209168.1;Name=WP_002209168.1;gbkey=CDS;product=transposase;protein_id=WP_002209168.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4077140 4077352 . + . ID=id325;gbkey=repeat_region NC_017265.1 RefSeq gene 4077246 4077476 . - . ID=gene3790;Name=YPC_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18990;old_locus_tag=YPC_4217 NC_017265.1 Protein Homology CDS 4077246 4077476 . - 0 ID=cds3694;Parent=gene3790;Dbxref=Genbank:WP_002215297.1;Name=WP_002215297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215297.1;transl_table=11 NC_017265.1 RefSeq gene 4077543 4078859 . - . ID=gene3791;Name=YPC_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS18995;old_locus_tag=YPC_4218 NC_017265.1 Protein Homology CDS 4077543 4078859 . - 0 ID=cds3695;Parent=gene3791;Dbxref=Genbank:WP_002209167.1;Name=WP_002209167.1;gbkey=CDS;product=mcrBC 5-methylcytosine restriction system component family protein;protein_id=WP_002209167.1;transl_table=11 NC_017265.1 RefSeq gene 4078856 4080919 . - . ID=gene3792;Name=YPC_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19000;old_locus_tag=YPC_4219 NC_017265.1 Protein Homology CDS 4078856 4080919 . - 0 ID=cds3696;Parent=gene3792;Dbxref=Genbank:WP_002209166.1;Name=WP_002209166.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209166.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4080966 4082922 . + . ID=id326;gbkey=repeat_region NC_017265.1 RefSeq gene 4081053 4082075 . + . ID=gene3793;Name=YPC_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19005;old_locus_tag=YPC_4220 NC_017265.1 Protein Homology CDS 4081053 4082075 . + 0 ID=cds3697;Parent=gene3793;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 4082075 4082854 . + . ID=gene3794;Name=YPC_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19010;old_locus_tag=YPC_4221 NC_017265.1 Protein Homology CDS 4082075 4082854 . + 0 ID=cds3698;Parent=gene3794;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 4082928 4083365 . - . ID=gene3795;Name=YPC_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19015;old_locus_tag=YPC_4222 NC_017265.1 Protein Homology CDS 4082928 4083365 . - 0 ID=cds3699;Parent=gene3795;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NC_017265.1 RefSeq gene 4083372 4084256 . - . ID=gene3796;Name=YPC_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19020;old_locus_tag=YPC_4223 NC_017265.1 Protein Homology CDS 4083372 4084256 . - 0 ID=cds3700;Parent=gene3796;Dbxref=Genbank:WP_002209010.1;Name=WP_002209010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209010.1;transl_table=11 NC_017265.1 RefSeq gene 4084353 4084943 . - . ID=gene3797;Name=YPC_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19025;old_locus_tag=YPC_4224 NC_017265.1 Protein Homology CDS 4084353 4084943 . - 0 ID=cds3701;Parent=gene3797;Dbxref=Genbank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;product=phosphatase;protein_id=WP_002209011.1;transl_table=11 NC_017265.1 RefSeq gene 4085265 4087088 . - . ID=gene3798;Name=YPC_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19030;old_locus_tag=YPC_4225 NC_017265.1 Protein Homology CDS 4085265 4087088 . - 0 ID=cds3702;Parent=gene3798;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11 NC_017265.1 RefSeq gene 4087333 4087464 . + . ID=gene3799;Name=YPC_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19035 NC_017265.1 Protein Homology CDS 4087333 4087464 . + 0 ID=cds3703;Parent=gene3799;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11 NC_017265.1 RefSeq gene 4087650 4089059 . + . ID=gene3800;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YPC_RS19040;old_locus_tag=YPC_4226 NC_017265.1 Protein Homology CDS 4087650 4089059 . + 0 ID=cds3704;Parent=gene3800;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11 NC_017265.1 RefSeq gene 4089312 4090361 . + . ID=gene3801;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YPC_RS19045;old_locus_tag=YPC_4227 NC_017265.1 Protein Homology CDS 4089312 4090361 . + 0 ID=cds3705;Parent=gene3801;Dbxref=Genbank:WP_002213151.1;Name=WP_002213151.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_002213151.1;transl_table=11 NC_017265.1 RefSeq gene 4090369 4091781 . + . ID=gene3802;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YPC_RS19050;old_locus_tag=YPC_4228 NC_017265.1 Protein Homology CDS 4090369 4091781 . + 0 ID=cds3706;Parent=gene3802;Dbxref=Genbank:WP_002213152.1;Name=WP_002213152.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_002213152.1;transl_table=11 NC_017265.1 RefSeq gene 4091835 4093205 . - . ID=gene3803;Name=YPC_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19055;old_locus_tag=YPC_4229 NC_017265.1 Protein Homology CDS 4091835 4093205 . - 0 ID=cds3707;Parent=gene3803;Dbxref=Genbank:WP_015683769.1;Name=WP_015683769.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_015683769.1;transl_table=11 NC_017265.1 RefSeq gene 4093388 4093954 . - . ID=gene3804;Name=YPC_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19060;old_locus_tag=YPC_4230 NC_017265.1 Protein Homology CDS 4093388 4093954 . - 0 ID=cds3708;Parent=gene3804;Dbxref=Genbank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NC_017265.1 RefSeq gene 4094699 4095349 . + . ID=gene3805;Name=YPC_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19065;old_locus_tag=YPC_4232 NC_017265.1 Protein Homology CDS 4094699 4095349 . + 0 ID=cds3709;Parent=gene3805;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4095490 4096920 . + . ID=id327;gbkey=repeat_region NC_017265.1 RefSeq gene 4095601 4096059 . - . ID=gene3806;Name=YPC_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19070;old_locus_tag=YPC_4234 NC_017265.1 Protein Homology CDS 4095601 4096059 . - 0 ID=cds3710;Parent=gene3806;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 4096049 4096204 . - . ID=gene3807;Name=YPC_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19075 NC_017265.1 Protein Homology CDS 4096049 4096204 . - 0 ID=cds3711;Parent=gene3807;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 4096311 4096769 . - . ID=gene3808;Name=YPC_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19080;old_locus_tag=YPC_4236 NC_017265.1 Protein Homology CDS 4096311 4096769 . - 0 ID=cds3712;Parent=gene3808;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017265.1 RefSeq gene 4096759 4096914 . - . ID=gene3809;Name=YPC_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19085 NC_017265.1 Protein Homology CDS 4096759 4096914 . - 0 ID=cds3713;Parent=gene3809;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_017265.1 RefSeq gene 4097178 4099976 . - . ID=gene3810;Name=YPC_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19090;old_locus_tag=YPC_4238 NC_017265.1 Protein Homology CDS 4097178 4099976 . - 0 ID=cds3714;Parent=gene3810;Dbxref=Genbank:WP_002213164.1;Name=WP_002213164.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_002213164.1;transl_table=11 NC_017265.1 RefSeq gene 4100468 4101091 . - . ID=gene3811;Name=YPC_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19095;old_locus_tag=YPC_4239 NC_017265.1 Protein Homology CDS 4100468 4101091 . - 0 ID=cds3715;Parent=gene3811;Dbxref=Genbank:WP_002213168.1;Name=WP_002213168.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NC_017265.1 RefSeq gene 4101119 4102105 . - . ID=gene3812;Name=YPC_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19100;old_locus_tag=YPC_4240 NC_017265.1 Protein Homology CDS 4101119 4102105 . - 0 ID=cds3716;Parent=gene3812;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NC_017265.1 RefSeq gene 4102196 4102465 . - . ID=gene3813;Name=YPC_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19105;old_locus_tag=YPC_4241 NC_017265.1 Protein Homology CDS 4102196 4102465 . - 0 ID=cds3717;Parent=gene3813;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11 NC_017265.1 RefSeq gene 4102619 4103206 . + . ID=gene3814;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YPC_RS19110;old_locus_tag=YPC_4242 NC_017265.1 Protein Homology CDS 4102619 4103206 . + 0 ID=cds3718;Parent=gene3814;Dbxref=Genbank:WP_015683770.1;Name=WP_015683770.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdopterin-guanine dinucleotide biosynthesis protein MobA;protein_id=WP_015683770.1;transl_table=11 NC_017265.1 RefSeq gene 4103206 4103736 . + . ID=gene3815;Name=YPC_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19115;old_locus_tag=YPC_4243 NC_017265.1 Protein Homology CDS 4103206 4103736 . + 0 ID=cds3719;Parent=gene3815;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4103757 4105076 . + . ID=id328;gbkey=repeat_region NC_017265.1 RefSeq gene 4103794 4105002 . - . ID=gene3816;Name=YPC_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19120;old_locus_tag=YPC_4244 NC_017265.1 Protein Homology CDS 4103794 4105002 . - 0 ID=cds3720;Parent=gene3816;Dbxref=Genbank:WP_002220999.1;Name=WP_002220999.1;gbkey=CDS;product=transposase;protein_id=WP_002220999.1;transl_table=11 NC_017265.1 RefSeq gene 4105124 4105354 . - . ID=gene3817;Name=YPC_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22070 NC_017265.1 Protein Homology CDS 4105124 4105354 . - 0 ID=cds3721;Parent=gene3817;Dbxref=Genbank:WP_025473721.1;Name=WP_025473721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025473721.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4105253 4111012 . + . ID=id329;gbkey=repeat_region NC_017265.1 RefSeq gene 4105505 4105620 . - . ID=gene3818;Name=YPC_RS19125;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS19125;old_locus_tag=YPC_4245 NC_017265.1 cmsearch rRNA 4105505 4105620 . - . ID=rna90;Parent=gene3818;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 cmsearch exon 4105505 4105620 . - . ID=id330;Parent=rna90;gbkey=rRNA;product=5S ribosomal RNA NC_017265.1 RefSeq gene 4105712 4108645 . - . ID=gene3819;Name=YPC_RS19130;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS19130;old_locus_tag=YPC_4246 NC_017265.1 RefSeq rRNA 4105712 4108645 . - . ID=rna91;Parent=gene3819;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq exon 4105712 4108645 . - . ID=id331;Parent=rna91;gbkey=rRNA;product=23S ribosomal RNA NC_017265.1 RefSeq gene 4108889 4108964 . - . ID=gene3820;Name=YPC_RS19135;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS19135;old_locus_tag=YPC_4247 NC_017265.1 tRNAscan-SE tRNA 4108889 4108964 . - . ID=rna92;Parent=gene3820;anticodon=(pos:complement(4108928..4108930));gbkey=tRNA;product=tRNA-Glu NC_017265.1 tRNAscan-SE exon 4108889 4108964 . - . ID=id332;Parent=rna92;anticodon=(pos:complement(4108928..4108930));gbkey=tRNA;product=tRNA-Glu NC_017265.1 RefSeq gene 4109098 4110646 . - . ID=gene3821;Name=YPC_RS19140;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPC_RS19140;old_locus_tag=YPC_4248 NC_017265.1 RefSeq rRNA 4109098 4110646 . - . ID=rna93;Parent=gene3821;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq exon 4109098 4110646 . - . ID=id333;Parent=rna93;gbkey=rRNA;product=16S ribosomal RNA NC_017265.1 RefSeq repeat_region 4111211 4113168 . + . ID=id334;gbkey=repeat_region NC_017265.1 RefSeq gene 4111299 4112321 . + . ID=gene3822;Name=YPC_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19150;old_locus_tag=YPC_4251 NC_017265.1 Protein Homology CDS 4111299 4112321 . + 0 ID=cds3722;Parent=gene3822;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017265.1 RefSeq gene 4112321 4113100 . + . ID=gene3823;Name=YPC_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19155;old_locus_tag=YPC_4252 NC_017265.1 Protein Homology CDS 4112321 4113100 . + 0 ID=cds3723;Parent=gene3823;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017265.1 RefSeq gene 4113113 4114051 . + . ID=gene3824;Name=YPC_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19160;old_locus_tag=YPC_4253 NC_017265.1 Protein Homology CDS 4113113 4114051 . + 0 ID=cds3724;Parent=gene3824;Dbxref=Genbank:WP_042468698.1;Name=WP_042468698.1;gbkey=CDS;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_042468698.1;transl_table=11 NC_017265.1 RefSeq gene 4114182 4115075 . - . ID=gene3825;Name=YPC_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19165;old_locus_tag=YPC_4254 NC_017265.1 Protein Homology CDS 4114182 4115075 . - 0 ID=cds3725;Parent=gene3825;Dbxref=Genbank:WP_002210151.1;Name=WP_002210151.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11 NC_017265.1 RefSeq gene 4115337 4116041 . + . ID=gene3826;Name=YPC_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19170;old_locus_tag=YPC_4255 NC_017265.1 Protein Homology CDS 4115337 4116041 . + 0 ID=cds3726;Parent=gene3826;Dbxref=Genbank:WP_002210150.1;Name=WP_002210150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210150.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4116075 4116489 . + . ID=id335;gbkey=repeat_region NC_017265.1 RefSeq gene 4116467 4116845 . - . ID=gene3827;Name=YPC_RS22080;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=YPC_RS22080 NC_017265.1 cmsearch ncRNA 4116467 4116845 . - . ID=rna94;Parent=gene3827;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_017265.1 cmsearch exon 4116467 4116845 . - . ID=id336;Parent=rna94;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_017265.1 RefSeq gene 4116865 4117764 . - . ID=gene3828;Name=YPC_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19175;old_locus_tag=YPC_4258 NC_017265.1 Protein Homology CDS 4116865 4117764 . - 0 ID=cds3727;Parent=gene3828;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NC_017265.1 RefSeq gene 4117827 4119800 . + . ID=gene3829;Name=YPC_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19180;old_locus_tag=YPC_4259 NC_017265.1 Protein Homology CDS 4117827 4119800 . + 0 ID=cds3728;Parent=gene3829;Dbxref=Genbank:WP_002228200.1;Name=WP_002228200.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_002228200.1;transl_table=11 NC_017265.1 RefSeq gene 4119884 4120237 . + . ID=gene3830;Name=YPC_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19185;old_locus_tag=YPC_4260 NC_017265.1 Protein Homology CDS 4119884 4120237 . + 0 ID=cds3729;Parent=gene3830;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11 NC_017265.1 RefSeq gene 4120508 4121098 . + . ID=gene3831;Name=YPC_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19190;old_locus_tag=YPC_4261 NC_017265.1 Protein Homology CDS 4120508 4121098 . + 0 ID=cds3730;Parent=gene3831;Dbxref=Genbank:WP_002210146.1;Name=WP_002210146.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_002210146.1;transl_table=11 NC_017265.1 RefSeq gene 4121109 4121684 . + . ID=gene3832;Name=YPC_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19195;old_locus_tag=YPC_4262 NC_017265.1 Protein Homology CDS 4121109 4121684 . + 0 ID=cds3731;Parent=gene3832;Dbxref=Genbank:WP_002210145.1;Name=WP_002210145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210145.1;transl_table=11 NC_017265.1 RefSeq gene 4121891 4122616 . - . ID=gene3833;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YPC_RS19200;old_locus_tag=YPC_4263 NC_017265.1 Protein Homology CDS 4121891 4122616 . - 0 ID=cds3732;Parent=gene3833;Dbxref=Genbank:WP_002210144.1;Name=WP_002210144.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_002210144.1;transl_table=11 NC_017265.1 RefSeq gene 4122613 4123266 . - . ID=gene3834;Name=YPC_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19205;old_locus_tag=YPC_4264 NC_017265.1 Protein Homology CDS 4122613 4123266 . - 0 ID=cds3733;Parent=gene3834;Dbxref=Genbank:WP_002210143.1;Name=WP_002210143.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_002210143.1;transl_table=11 NC_017265.1 RefSeq gene 4123296 4123490 . - . ID=gene3835;Name=YPC_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19210 NC_017265.1 Protein Homology CDS 4123296 4123490 . - 0 ID=cds3734;Parent=gene3835;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11 NC_017265.1 RefSeq gene 4123508 4125844 . - . ID=gene3836;Name=YPC_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19215;old_locus_tag=YPC_4267 NC_017265.1 Protein Homology CDS 4123508 4125844 . - 0 ID=cds3735;Parent=gene3836;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11 NC_017265.1 RefSeq gene 4125912 4126127 . - . ID=gene3837;Name=YPC_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19220 NC_017265.1 Protein Homology CDS 4125912 4126127 . - 0 ID=cds3736;Parent=gene3837;Dbxref=Genbank:WP_002216211.1;Name=WP_002216211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216211.1;transl_table=11 NC_017265.1 RefSeq gene 4126108 4127031 . - . ID=gene3838;Name=YPC_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19225;old_locus_tag=YPC_4269 NC_017265.1 Protein Homology CDS 4126108 4127031 . - 0 ID=cds3737;Parent=gene3838;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11 NC_017265.1 RefSeq gene 4127854 4132311 . + . ID=gene3839;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YPC_RS19230;old_locus_tag=YPC_4270 NC_017265.1 Protein Homology CDS 4127854 4132311 . + 0 ID=cds3738;Parent=gene3839;Dbxref=Genbank:WP_002228691.1;Name=WP_002228691.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_002228691.1;transl_table=11 NC_017265.1 RefSeq gene 4132321 4133739 . + . ID=gene3840;Name=YPC_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19235;old_locus_tag=YPC_4271 NC_017265.1 Protein Homology CDS 4132321 4133739 . + 0 ID=cds3739;Parent=gene3840;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11 NC_017265.1 RefSeq gene 4134180 4134665 . + . ID=gene3841;Name=YPC_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19240;old_locus_tag=YPC_4272 NC_017265.1 Protein Homology CDS 4134180 4134665 . + 0 ID=cds3740;Parent=gene3841;Dbxref=Genbank:WP_015683773.1;Name=WP_015683773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683773.1;transl_table=11 NC_017265.1 RefSeq gene 4134818 4135333 . - . ID=gene3842;Name=YPC_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19245;old_locus_tag=YPC_4273 NC_017265.1 Protein Homology CDS 4134818 4135333 . - 0 ID=cds3741;Parent=gene3842;Dbxref=Genbank:WP_002216203.1;Name=WP_002216203.1;gbkey=CDS;product=peptidase;protein_id=WP_002216203.1;transl_table=11 NC_017265.1 RefSeq gene 4135339 4135980 . - . ID=gene3843;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YPC_RS19250;old_locus_tag=YPC_4274 NC_017265.1 Protein Homology CDS 4135339 4135980 . - 0 ID=cds3742;Parent=gene3843;Dbxref=Genbank:WP_015683774.1;Name=WP_015683774.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_015683774.1;transl_table=11 NC_017265.1 RefSeq gene 4136160 4136357 . + . ID=gene3844;Name=YPC_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19255 NC_017265.1 Protein Homology CDS 4136160 4136357 . + 0 ID=cds3743;Parent=gene3844;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NC_017265.1 RefSeq gene 4136354 4136746 . - . ID=gene3845;Name=YPC_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19260;old_locus_tag=YPC_4275 NC_017265.1 Protein Homology CDS 4136354 4136746 . - 0 ID=cds3744;Parent=gene3845;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NC_017265.1 RefSeq gene 4136761 4137189 . - . ID=gene3846;Name=YPC_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19265;old_locus_tag=YPC_4276 NC_017265.1 Protein Homology CDS 4136761 4137189 . - 0 ID=cds3745;Parent=gene3846;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NC_017265.1 RefSeq gene 4137503 4138630 . - . ID=gene3847;Name=YPC_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19270;old_locus_tag=YPC_4277 NC_017265.1 Protein Homology CDS 4137503 4138630 . - 0 ID=cds3746;Parent=gene3847;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11 NC_017265.1 RefSeq gene 4138854 4139258 . + . ID=gene3848;Name=YPC_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19275;old_locus_tag=YPC_4278 NC_017265.1 Protein Homology CDS 4138854 4139258 . + 0 ID=cds3747;Parent=gene3848;Dbxref=Genbank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210130.1;transl_table=11 NC_017265.1 RefSeq gene 4139529 4140902 . + . ID=gene3849;Name=YPC_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19280;old_locus_tag=YPC_4279 NC_017265.1 Protein Homology CDS 4139529 4140902 . + 0 ID=cds3748;Parent=gene3849;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4140908 4141625 . + . ID=id337;gbkey=repeat_region NC_017265.1 RefSeq gene 4141019 4141477 . - . ID=gene3850;Name=YPC_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19285;old_locus_tag=YPC_4280 NC_017265.1 Protein Homology CDS 4141019 4141477 . - 0 ID=cds3749;Parent=gene3850;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 4141703 4142791 . + . ID=gene3851;Name=YPC_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19290;old_locus_tag=YPC_4282 NC_017265.1 Protein Homology CDS 4141703 4142791 . + 0 ID=cds3750;Parent=gene3851;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11 NC_017265.1 RefSeq gene 4142972 4144234 . - . ID=gene3852;Name=YPC_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19295;old_locus_tag=YPC_4283 NC_017265.1 Protein Homology CDS 4142972 4144234 . - 0 ID=cds3751;Parent=gene3852;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NC_017265.1 RefSeq gene 4144388 4144642 . - . ID=gene3853;Name=YPC_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19300;old_locus_tag=YPC_4284 NC_017265.1 Protein Homology CDS 4144388 4144642 . - 0 ID=cds3752;Parent=gene3853;Dbxref=Genbank:WP_002210126.1;Name=WP_002210126.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210126.1;transl_table=11 NC_017265.1 RefSeq gene 4144789 4145091 . - . ID=gene3854;Name=YPC_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19305;old_locus_tag=YPC_4285 NC_017265.1 Protein Homology CDS 4144789 4145091 . - 0 ID=cds3753;Parent=gene3854;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11 NC_017265.1 RefSeq gene 4145127 4145750 . - . ID=gene3855;Name=YPC_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19310;old_locus_tag=YPC_4286 NC_017265.1 Protein Homology CDS 4145127 4145750 . - 0 ID=cds3754;Parent=gene3855;Dbxref=Genbank:WP_002210124.1;Name=WP_002210124.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter substrate-binding protein;protein_id=WP_002210124.1;transl_table=11 NC_017265.1 RefSeq gene 4145763 4146320 . - . ID=gene3856;Name=YPC_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19315;old_locus_tag=YPC_4287 NC_017265.1 Protein Homology CDS 4145763 4146320 . - 0 ID=cds3755;Parent=gene3856;Dbxref=Genbank:WP_002210123.1;Name=WP_002210123.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_002210123.1;transl_table=11 NC_017265.1 RefSeq gene 4146325 4147107 . - . ID=gene3857;Name=YPC_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19320;old_locus_tag=YPC_4288 NC_017265.1 Protein Homology CDS 4146325 4147107 . - 0 ID=cds3756;Parent=gene3857;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11 NC_017265.1 RefSeq gene 4147325 4148143 . - . ID=gene3858;Name=YPC_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19325;old_locus_tag=YPC_4289 NC_017265.1 Protein Homology CDS 4147325 4148143 . - 0 ID=cds3757;Parent=gene3858;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11 NC_017265.1 RefSeq gene 4148408 4149382 . + . ID=gene3859;Name=YPC_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19330;old_locus_tag=YPC_4290 NC_017265.1 Protein Homology CDS 4148408 4149382 . + 0 ID=cds3758;Parent=gene3859;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11 NC_017265.1 RefSeq gene 4149493 4150479 . + . ID=gene3860;Name=YPC_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19335;old_locus_tag=YPC_4291 NC_017265.1 Protein Homology CDS 4149493 4150479 . + 0 ID=cds3759;Parent=gene3860;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NC_017265.1 RefSeq gene 4150728 4151291 . + . ID=gene3861;Name=YPC_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19340;old_locus_tag=YPC_4292 NC_017265.1 Protein Homology CDS 4150728 4151291 . + 0 ID=cds3760;Parent=gene3861;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NC_017265.1 RefSeq gene 4151288 4151851 . + . ID=gene3862;Name=YPC_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19345;old_locus_tag=YPC_4293 NC_017265.1 Protein Homology CDS 4151288 4151851 . + 0 ID=cds3761;Parent=gene3862;Dbxref=Genbank:WP_002218352.1;Name=WP_002218352.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002218352.1;transl_table=11 NC_017265.1 RefSeq gene 4151835 4152380 . + . ID=gene3863;Name=YPC_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19350;old_locus_tag=YPC_4294 NC_017265.1 Protein Homology CDS 4151835 4152380 . + 0 ID=cds3762;Parent=gene3863;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11 NC_017265.1 RefSeq gene 4152387 4153112 . + . ID=gene3864;Name=YPC_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19355;old_locus_tag=YPC_4295 NC_017265.1 Protein Homology CDS 4152387 4153112 . + 0 ID=cds3763;Parent=gene3864;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NC_017265.1 RefSeq gene 4153174 4154607 . + . ID=gene3865;Name=YPC_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19360;old_locus_tag=YPC_4296 NC_017265.1 Protein Homology CDS 4153174 4154607 . + 0 ID=cds3764;Parent=gene3865;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11 NC_017265.1 RefSeq gene 4154631 4154918 . + . ID=gene3866;Name=YPC_RS19365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS19365;pseudo=true NC_017265.1 Protein Homology CDS 4154631 4154918 . + 0 ID=cds3765;Parent=gene3866;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4154736..4154738%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 4155036 4155518 . + . ID=gene3867;Name=YPC_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19370;old_locus_tag=YPC_4299 NC_017265.1 Protein Homology CDS 4155036 4155518 . + 0 ID=cds3766;Parent=gene3867;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11 NC_017265.1 RefSeq gene 4155824 4156678 . + . ID=gene3868;Name=YPC_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19375;old_locus_tag=YPC_4300 NC_017265.1 Protein Homology CDS 4155824 4156678 . + 0 ID=cds3767;Parent=gene3868;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11 NC_017265.1 RefSeq gene 4156675 4156947 . + . ID=gene3869;Name=YPC_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19380;old_locus_tag=YPC_4301 NC_017265.1 Protein Homology CDS 4156675 4156947 . + 0 ID=cds3768;Parent=gene3869;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11 NC_017265.1 RefSeq gene 4157285 4158220 . + . ID=gene3870;Name=YPC_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19385;old_locus_tag=YPC_4302 NC_017265.1 Protein Homology CDS 4157285 4158220 . + 0 ID=cds3769;Parent=gene3870;Dbxref=Genbank:WP_002210111.1;Name=WP_002210111.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_002210111.1;transl_table=11 NC_017265.1 RefSeq gene 4158232 4158696 . + . ID=gene3871;Name=YPC_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19390;old_locus_tag=YPC_4303 NC_017265.1 Protein Homology CDS 4158232 4158696 . + 0 ID=cds3770;Parent=gene3871;Dbxref=Genbank:WP_002210110.1;Name=WP_002210110.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_002210110.1;transl_table=11 NC_017265.1 RefSeq gene 4158834 4159220 . + . ID=gene3872;Name=YPC_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19395;old_locus_tag=YPC_4304 NC_017265.1 Protein Homology CDS 4158834 4159220 . + 0 ID=cds3771;Parent=gene3872;Dbxref=Genbank:WP_002210109.1;Name=WP_002210109.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210109.1;transl_table=11 NC_017265.1 RefSeq gene 4159519 4159995 . + . ID=gene3873;Name=YPC_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19400;old_locus_tag=YPC_4305 NC_017265.1 Protein Homology CDS 4159519 4159995 . + 0 ID=cds3772;Parent=gene3873;Dbxref=Genbank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210107.1;transl_table=11 NC_017265.1 RefSeq gene 4160229 4161182 . + . ID=gene3874;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YPC_RS19405;old_locus_tag=YPC_4306 NC_017265.1 Protein Homology CDS 4160229 4161182 . + 0 ID=cds3773;Parent=gene3874;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11 NC_017265.1 RefSeq gene 4161593 4163008 . + . ID=gene3875;Name=YPC_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19410;old_locus_tag=YPC_4307 NC_017265.1 Protein Homology CDS 4161593 4163008 . + 0 ID=cds3774;Parent=gene3875;Dbxref=Genbank:WP_002215779.1;Name=WP_002215779.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_002215779.1;transl_table=11 NC_017265.1 RefSeq gene 4163103 4164770 . + . ID=gene3876;Name=YPC_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19415;old_locus_tag=YPC_4308 NC_017265.1 Protein Homology CDS 4163103 4164770 . + 0 ID=cds3775;Parent=gene3876;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11 NC_017265.1 RefSeq gene 4165123 4165533 . + . ID=gene3877;Name=YPC_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19420;old_locus_tag=YPC_4309 NC_017265.1 Protein Homology CDS 4165123 4165533 . + 0 ID=cds3776;Parent=gene3877;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NC_017265.1 RefSeq gene 4165765 4166151 . - . ID=gene3878;Name=YPC_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19425;old_locus_tag=YPC_4311 NC_017265.1 Protein Homology CDS 4165765 4166151 . - 0 ID=cds3777;Parent=gene3878;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11 NC_017265.1 RefSeq gene 4166359 4167003 . - . ID=gene3879;Name=YPC_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19430;old_locus_tag=YPC_4312 NC_017265.1 Protein Homology CDS 4166359 4167003 . - 0 ID=cds3778;Parent=gene3879;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NC_017265.1 RefSeq gene 4167252 4168592 . - . ID=gene3880;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YPC_RS19435;old_locus_tag=YPC_4313 NC_017265.1 Protein Homology CDS 4167252 4168592 . - 0 ID=cds3779;Parent=gene3880;Dbxref=Genbank:WP_002210100.1;Name=WP_002210100.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_002210100.1;transl_table=11 NC_017265.1 RefSeq gene 4168773 4169321 . + . ID=gene3881;Name=YPC_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19440;old_locus_tag=YPC_4314 NC_017265.1 Protein Homology CDS 4168773 4169321 . + 0 ID=cds3780;Parent=gene3881;Dbxref=Genbank:WP_002210099.1;Name=WP_002210099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210099.1;transl_table=11 NC_017265.1 RefSeq gene 4169433 4169714 . - . ID=gene3882;Name=YPC_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19445;old_locus_tag=YPC_4315 NC_017265.1 Protein Homology CDS 4169433 4169714 . - 0 ID=cds3781;Parent=gene3882;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11 NC_017265.1 RefSeq gene 4169719 4170192 . - . ID=gene3883;Name=YPC_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19450;old_locus_tag=YPC_4316 NC_017265.1 Protein Homology CDS 4169719 4170192 . - 0 ID=cds3782;Parent=gene3883;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11 NC_017265.1 RefSeq gene 4170387 4170725 . - . ID=gene3884;Name=YPC_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19455 NC_017265.1 Protein Homology CDS 4170387 4170725 . - 0 ID=cds3783;Parent=gene3884;Dbxref=Genbank:WP_002214289.1;Name=WP_002214289.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002214289.1;transl_table=11 NC_017265.1 RefSeq gene 4170722 4171855 . - . ID=gene3885;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YPC_RS19460 NC_017265.1 Protein Homology CDS 4170722 4171855 . - 0 ID=cds3784;Parent=gene3885;Dbxref=Genbank:WP_002214290.1;Name=WP_002214290.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_002214290.1;transl_table=11 NC_017265.1 RefSeq gene 4172122 4174077 . - . ID=gene3886;Name=YPC_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19465;old_locus_tag=YPC_4319 NC_017265.1 Protein Homology CDS 4172122 4174077 . - 0 ID=cds3785;Parent=gene3886;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NC_017265.1 RefSeq gene 4174079 4175014 . - . ID=gene3887;Name=YPC_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19470;old_locus_tag=YPC_4320 NC_017265.1 Protein Homology CDS 4174079 4175014 . - 0 ID=cds3786;Parent=gene3887;Dbxref=Genbank:WP_002210094.1;Name=WP_002210094.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NC_017265.1 RefSeq gene 4175022 4175225 . - . ID=gene3888;Name=YPC_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19475;old_locus_tag=YPC_4321 NC_017265.1 Protein Homology CDS 4175022 4175225 . - 0 ID=cds3787;Parent=gene3888;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11 NC_017265.1 RefSeq gene 4175528 4176439 . + . ID=gene3889;Name=YPC_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19480;old_locus_tag=YPC_4323 NC_017265.1 Protein Homology CDS 4175528 4176439 . + 0 ID=cds3788;Parent=gene3889;Dbxref=Genbank:WP_002210092.1;Name=WP_002210092.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210092.1;transl_table=11 NC_017265.1 RefSeq gene 4176700 4177566 . + . ID=gene3890;Name=YPC_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19485;old_locus_tag=YPC_4324 NC_017265.1 Protein Homology CDS 4176700 4177566 . + 0 ID=cds3789;Parent=gene3890;Dbxref=Genbank:WP_002214297.1;Name=WP_002214297.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002214297.1;transl_table=11 NC_017265.1 RefSeq gene 4177802 4180303 . + . ID=gene3891;Name=YPC_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19490;old_locus_tag=YPC_4326 NC_017265.1 Protein Homology CDS 4177802 4180303 . + 0 ID=cds3790;Parent=gene3891;Dbxref=Genbank:WP_002210090.1;Name=WP_002210090.1;gbkey=CDS;product=toxin;protein_id=WP_002210090.1;transl_table=11 NC_017265.1 RefSeq gene 4180344 4183937 . + . ID=gene3892;Name=YPC_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19495;old_locus_tag=YPC_4327 NC_017265.1 Protein Homology CDS 4180344 4183937 . + 0 ID=cds3791;Parent=gene3892;Dbxref=Genbank:WP_002220204.1;Name=WP_002220204.1;gbkey=CDS;product=toxin;protein_id=WP_002220204.1;transl_table=11 NC_017265.1 RefSeq gene 4183994 4188484 . + . ID=gene3893;Name=YPC_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19500;old_locus_tag=YPC_4328 NC_017265.1 Protein Homology CDS 4183994 4188484 . + 0 ID=cds3792;Parent=gene3893;Dbxref=Genbank:WP_002210089.1;Name=WP_002210089.1;gbkey=CDS;product=toxin;protein_id=WP_002210089.1;transl_table=11 NC_017265.1 RefSeq gene 4188618 4188920 . + . ID=gene3894;Name=YPC_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19505;old_locus_tag=YPC_4329 NC_017265.1 Protein Homology CDS 4188618 4188920 . + 0 ID=cds3793;Parent=gene3894;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11 NC_017265.1 RefSeq gene 4188933 4189334 . + . ID=gene3895;Name=YPC_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19510;old_locus_tag=YPC_4330 NC_017265.1 Protein Homology CDS 4188933 4189334 . + 0 ID=cds3794;Parent=gene3895;Dbxref=Genbank:WP_002210087.1;Name=WP_002210087.1;gbkey=CDS;product=peptidase M15;protein_id=WP_002210087.1;transl_table=11 NC_017265.1 RefSeq gene 4189331 4189690 . + . ID=gene3896;Name=YPC_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19515;old_locus_tag=YPC_4331 NC_017265.1 Protein Homology CDS 4189331 4189690 . + 0 ID=cds3795;Parent=gene3896;Dbxref=Genbank:WP_002210086.1;Name=WP_002210086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210086.1;transl_table=11 NC_017265.1 RefSeq gene 4189891 4192722 . + . ID=gene3897;Name=YPC_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19525;old_locus_tag=YPC_4332 NC_017265.1 Protein Homology CDS 4189891 4192722 . + 0 ID=cds3796;Parent=gene3897;Dbxref=Genbank:WP_002210084.1;Name=WP_002210084.1;gbkey=CDS;product=toxin;protein_id=WP_002210084.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4189918 4191866 . + . ID=id338;gbkey=repeat_region NC_017265.1 RefSeq gene 4192747 4195605 . + . ID=gene3898;Name=YPC_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19530;old_locus_tag=YPC_4333 NC_017265.1 Protein Homology CDS 4192747 4195605 . + 0 ID=cds3797;Parent=gene3898;Dbxref=Genbank:WP_002210083.1;Name=WP_002210083.1;gbkey=CDS;product=toxin;protein_id=WP_002210083.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4192774 4194722 . + . ID=id339;gbkey=repeat_region NC_017265.1 RefSeq gene 4195808 4197253 . - . ID=gene3899;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YPC_RS19535;old_locus_tag=YPC_4335 NC_017265.1 Protein Homology CDS 4195808 4197253 . - 0 ID=cds3798;Parent=gene3899;Dbxref=Genbank:WP_002210082.1;Name=WP_002210082.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_002210082.1;transl_table=11 NC_017265.1 RefSeq gene 4197265 4198134 . - . ID=gene3900;Name=YPC_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19540;old_locus_tag=YPC_4336 NC_017265.1 Protein Homology CDS 4197265 4198134 . - 0 ID=cds3799;Parent=gene3900;Dbxref=Genbank:WP_002210081.1;Name=WP_002210081.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_002210081.1;transl_table=11 NC_017265.1 RefSeq gene 4198131 4202033 . - . ID=gene3901;Name=YPC_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19545;old_locus_tag=YPC_4337 NC_017265.1 Protein Homology CDS 4198131 4202033 . - 0 ID=cds3800;Parent=gene3901;Dbxref=Genbank:WP_013060352.1;Name=WP_013060352.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060352.1;transl_table=11 NC_017265.1 RefSeq gene 4202148 4203617 . - . ID=gene3902;Name=YPC_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19550;old_locus_tag=YPC_4338 NC_017265.1 Protein Homology CDS 4202148 4203617 . - 0 ID=cds3801;Parent=gene3902;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NC_017265.1 RefSeq gene 4203607 4204200 . - . ID=gene3903;Name=YPC_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19555;old_locus_tag=YPC_4339 NC_017265.1 Protein Homology CDS 4203607 4204200 . - 0 ID=cds3802;Parent=gene3903;Dbxref=Genbank:WP_002210078.1;Name=WP_002210078.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210078.1;transl_table=11 NC_017265.1 RefSeq gene 4204214 4204702 . - . ID=gene3904;Name=YPC_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19560;old_locus_tag=YPC_4340 NC_017265.1 Protein Homology CDS 4204214 4204702 . - 0 ID=cds3803;Parent=gene3904;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NC_017265.1 RefSeq gene 4204699 4205694 . - . ID=gene3905;Name=YPC_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19565;old_locus_tag=YPC_4341 NC_017265.1 Protein Homology CDS 4204699 4205694 . - 0 ID=cds3804;Parent=gene3905;Dbxref=Genbank:WP_002210076.1;Name=WP_002210076.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NC_017265.1 RefSeq gene 4205898 4206941 . - . ID=gene3906;Name=YPC_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19570;old_locus_tag=YPC_4342 NC_017265.1 Protein Homology CDS 4205898 4206941 . - 0 ID=cds3805;Parent=gene3906;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NC_017265.1 RefSeq gene 4207278 4209194 . - . ID=gene3907;Name=YPC_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19575;old_locus_tag=YPC_4343 NC_017265.1 Protein Homology CDS 4207278 4209194 . - 0 ID=cds3806;Parent=gene3907;Dbxref=Genbank:WP_002210075.1;Name=WP_002210075.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210075.1;transl_table=11 NC_017265.1 RefSeq gene 4209595 4210572 . + . ID=gene3908;Name=YPC_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19580;old_locus_tag=YPC_4344 NC_017265.1 Protein Homology CDS 4209595 4210572 . + 0 ID=cds3807;Parent=gene3908;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11 NC_017265.1 RefSeq gene 4210795 4211895 . + . ID=gene3909;Name=YPC_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19585;old_locus_tag=YPC_4345 NC_017265.1 Protein Homology CDS 4210795 4211895 . + 0 ID=cds3808;Parent=gene3909;Dbxref=Genbank:WP_002210073.1;Name=WP_002210073.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfoxide reductase catalytic subunit YedY;protein_id=WP_002210073.1;transl_table=11 NC_017265.1 RefSeq gene 4211895 4212515 . + . ID=gene3910;Name=YPC_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19590;old_locus_tag=YPC_4346 NC_017265.1 Protein Homology CDS 4211895 4212515 . + 0 ID=cds3809;Parent=gene3910;Dbxref=Genbank:WP_002210072.1;Name=WP_002210072.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_002210072.1;transl_table=11 NC_017265.1 RefSeq gene 4212778 4213230 . + . ID=gene3911;Name=YPC_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19595;old_locus_tag=YPC_4347 NC_017265.1 Protein Homology CDS 4212778 4213230 . + 0 ID=cds3810;Parent=gene3911;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NC_017265.1 RefSeq gene 4213388 4213852 . + . ID=gene3912;Name=YPC_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19600;old_locus_tag=YPC_4348 NC_017265.1 Protein Homology CDS 4213388 4213852 . + 0 ID=cds3811;Parent=gene3912;Dbxref=Genbank:WP_002210070.1;Name=WP_002210070.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_002210070.1;transl_table=11 NC_017265.1 RefSeq gene 4213864 4215213 . + . ID=gene3913;Name=YPC_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19605;old_locus_tag=YPC_4349 NC_017265.1 Protein Homology CDS 4213864 4215213 . + 0 ID=cds3812;Parent=gene3913;Dbxref=Genbank:WP_002210069.1;Name=WP_002210069.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002210069.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4216256 4216556 . + . ID=id340;gbkey=repeat_region NC_017265.1 RefSeq gene 4216571 4216813 . + . ID=gene3914;Name=YPC_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19610;old_locus_tag=YPC_4352 NC_017265.1 Protein Homology CDS 4216571 4216813 . + 0 ID=cds3813;Parent=gene3914;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11 NC_017265.1 RefSeq gene 4216803 4218257 . + . ID=gene3915;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YPC_RS19615;old_locus_tag=YPC_4353 NC_017265.1 Protein Homology CDS 4216803 4218257 . + 0 ID=cds3814;Parent=gene3915;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NC_017265.1 RefSeq gene 4218333 4219214 . + . ID=gene3916;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YPC_RS19620;old_locus_tag=YPC_4354 NC_017265.1 Protein Homology CDS 4218333 4219214 . + 0 ID=cds3815;Parent=gene3916;Dbxref=Genbank:WP_002220963.1;Name=WP_002220963.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NC_017265.1 RefSeq gene 4219803 4220768 . + . ID=gene3917;Name=YPC_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19625;old_locus_tag=YPC_4356 NC_017265.1 Protein Homology CDS 4219803 4220768 . + 0 ID=cds3816;Parent=gene3917;Dbxref=Genbank:WP_002210062.1;Name=WP_002210062.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_002210062.1;transl_table=11 NC_017265.1 RefSeq gene 4220793 4221089 . + . ID=gene3918;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YPC_RS19630;old_locus_tag=YPC_4357 NC_017265.1 Protein Homology CDS 4220793 4221089 . + 0 ID=cds3817;Parent=gene3918;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4221201 4221683 . + . ID=id341;gbkey=repeat_region NC_017265.1 RefSeq gene 4221843 4222319 . - . ID=gene3919;Name=YPC_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19635;old_locus_tag=YPC_4359 NC_017265.1 Protein Homology CDS 4221843 4222319 . - 0 ID=cds3818;Parent=gene3919;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11 NC_017265.1 RefSeq gene 4222385 4223047 . - . ID=gene3920;Name=YPC_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19640;old_locus_tag=YPC_4360 NC_017265.1 Protein Homology CDS 4222385 4223047 . - 0 ID=cds3819;Parent=gene3920;Dbxref=Genbank:WP_002210059.1;Name=WP_002210059.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210059.1;transl_table=11 NC_017265.1 RefSeq gene 4223137 4224501 . - . ID=gene3921;Name=YPC_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19645;old_locus_tag=YPC_4361 NC_017265.1 Protein Homology CDS 4223137 4224501 . - 0 ID=cds3820;Parent=gene3921;Dbxref=Genbank:WP_002210058.1;Name=WP_002210058.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210058.1;transl_table=11 NC_017265.1 RefSeq gene 4224655 4225050 . - . ID=gene3922;Name=YPC_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19650;old_locus_tag=YPC_4362 NC_017265.1 Protein Homology CDS 4224655 4225050 . - 0 ID=cds3821;Parent=gene3922;Dbxref=Genbank:WP_002217470.1;Name=WP_002217470.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_002217470.1;transl_table=11 NC_017265.1 RefSeq gene 4225228 4226118 . - . ID=gene3923;Name=YPC_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19655;old_locus_tag=YPC_4363 NC_017265.1 Protein Homology CDS 4225228 4226118 . - 0 ID=cds3822;Parent=gene3923;Dbxref=Genbank:WP_002210056.1;Name=WP_002210056.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_002210056.1;transl_table=11 NC_017265.1 RefSeq gene 4226183 4226995 . - . ID=gene3924;Name=YPC_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19660;old_locus_tag=YPC_4364 NC_017265.1 Protein Homology CDS 4226183 4226995 . - 0 ID=cds3823;Parent=gene3924;Dbxref=Genbank:WP_002210055.1;Name=WP_002210055.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002210055.1;transl_table=11 NC_017265.1 RefSeq gene 4227471 4227938 . + . ID=gene3925;Name=YPC_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19665;old_locus_tag=YPC_4365 NC_017265.1 Protein Homology CDS 4227471 4227938 . + 0 ID=cds3824;Parent=gene3925;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11 NC_017265.1 RefSeq gene 4228229 4228378 . + . ID=gene3926;Name=YPC_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19670 NC_017265.1 Protein Homology CDS 4228229 4228378 . + 0 ID=cds3825;Parent=gene3926;Dbxref=Genbank:WP_002374696.1;Name=WP_002374696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002374696.1;transl_table=11 NC_017265.1 cmsearch region 4228292 4228734 . + . ID=id342;Note=cspA;gbkey=misc_feature NC_017265.1 RefSeq repeat_region 4228453 4228655 . + . ID=id343;gbkey=repeat_region NC_017265.1 RefSeq gene 4228471 4228683 . + . ID=gene3927;Name=YPC_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19675;old_locus_tag=YPC_4367 NC_017265.1 Protein Homology CDS 4228471 4228683 . + 0 ID=cds3826;Parent=gene3927;Dbxref=Genbank:WP_002210053.1;Name=WP_002210053.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210053.1;transl_table=11 NC_017265.1 cmsearch region 4228769 4229182 . + . ID=id344;Note=cspA;gbkey=misc_feature NC_017265.1 RefSeq repeat_region 4228925 4229127 . + . ID=id345;gbkey=repeat_region NC_017265.1 RefSeq gene 4228943 4229155 . + . ID=gene3928;Name=YPC_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19680;old_locus_tag=YPC_4368 NC_017265.1 Protein Homology CDS 4228943 4229155 . + 0 ID=cds3827;Parent=gene3928;Dbxref=Genbank:WP_002210052.1;Name=WP_002210052.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210052.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4229227 4229945 . + . ID=id346;gbkey=repeat_region NC_017265.1 RefSeq gene 4229338 4229847 . - . ID=gene3929;Name=YPC_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19685;old_locus_tag=YPC_4369 NC_017265.1 Protein Homology CDS 4229338 4229847 . - 0 ID=cds3828;Parent=gene3929;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11 NC_017265.1 RefSeq gene 4229786 4229962 . - . ID=gene3930;Name=YPC_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19690 NC_017265.1 Protein Homology CDS 4229786 4229962 . - 0 ID=cds3829;Parent=gene3930;Dbxref=Genbank:WP_025470774.1;Name=WP_025470774.1;gbkey=CDS;product=transposase;protein_id=WP_025470774.1;transl_table=11 NC_017265.1 RefSeq gene 4230201 4231376 . + . ID=gene3931;Name=YPC_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19695;old_locus_tag=YPC_4371 NC_017265.1 Protein Homology CDS 4230201 4231376 . + 0 ID=cds3830;Parent=gene3931;Dbxref=Genbank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_002210051.1;transl_table=11 NC_017265.1 RefSeq gene 4231483 4232829 . - . ID=gene3932;Name=YPC_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19700;old_locus_tag=YPC_4372 NC_017265.1 Protein Homology CDS 4231483 4232829 . - 0 ID=cds3831;Parent=gene3932;Dbxref=Genbank:WP_002210050.1;Name=WP_002210050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210050.1;transl_table=11 NC_017265.1 RefSeq gene 4233083 4233934 . + . ID=gene3933;Name=YPC_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19705;old_locus_tag=YPC_4373 NC_017265.1 Protein Homology CDS 4233083 4233934 . + 0 ID=cds3832;Parent=gene3933;Dbxref=Genbank:WP_002228699.1;Name=WP_002228699.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_002228699.1;transl_table=11 NC_017265.1 RefSeq gene 4234124 4234729 . - . ID=gene3934;Name=YPC_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19710;old_locus_tag=YPC_4374 NC_017265.1 Protein Homology CDS 4234124 4234729 . - 0 ID=cds3833;Parent=gene3934;Dbxref=Genbank:WP_002210048.1;Name=WP_002210048.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_002210048.1;transl_table=11 NC_017265.1 RefSeq gene 4234726 4236363 . - . ID=gene3935;Name=YPC_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19715;old_locus_tag=YPC_4375 NC_017265.1 Protein Homology CDS 4234726 4236363 . - 0 ID=cds3834;Parent=gene3935;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11 NC_017265.1 RefSeq gene 4236382 4237335 . - . ID=gene3936;Name=YPC_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19720;old_locus_tag=YPC_4376 NC_017265.1 Protein Homology CDS 4236382 4237335 . - 0 ID=cds3835;Parent=gene3936;Dbxref=Genbank:WP_002210046.1;Name=WP_002210046.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210046.1;transl_table=11 NC_017265.1 RefSeq gene 4237337 4238326 . - . ID=gene3937;Name=YPC_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19725;old_locus_tag=YPC_4377 NC_017265.1 Protein Homology CDS 4237337 4238326 . - 0 ID=cds3836;Parent=gene3937;Dbxref=Genbank:WP_002210045.1;Name=WP_002210045.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NC_017265.1 RefSeq gene 4238319 4239815 . - . ID=gene3938;Name=YPC_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19730;old_locus_tag=YPC_4378 NC_017265.1 Protein Homology CDS 4238319 4239815 . - 0 ID=cds3837;Parent=gene3938;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NC_017265.1 RefSeq gene 4240019 4241008 . - . ID=gene3939;Name=YPC_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19735;old_locus_tag=YPC_4379 NC_017265.1 Protein Homology CDS 4240019 4241008 . - 0 ID=cds3838;Parent=gene3939;Dbxref=Genbank:WP_002210043.1;Name=WP_002210043.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210043.1;transl_table=11 NC_017265.1 RefSeq gene 4241802 4242722 . + . ID=gene3940;Name=YPC_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19740;old_locus_tag=YPC_4380 NC_017265.1 Protein Homology CDS 4241802 4242722 . + 0 ID=cds3839;Parent=gene3940;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11 NC_017265.1 RefSeq gene 4242874 4244061 . + . ID=gene3941;Name=YPC_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19745;old_locus_tag=YPC_4381 NC_017265.1 Protein Homology CDS 4242874 4244061 . + 0 ID=cds3840;Parent=gene3941;Dbxref=Genbank:WP_002210041.1;Name=WP_002210041.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210041.1;transl_table=11 NC_017265.1 RefSeq gene 4244279 4245928 . - . ID=gene3942;Name=YPC_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19750;old_locus_tag=YPC_4382 NC_017265.1 Protein Homology CDS 4244279 4245928 . - 0 ID=cds3841;Parent=gene3942;Dbxref=Genbank:WP_002215816.1;Name=WP_002215816.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002215816.1;transl_table=11 NC_017265.1 RefSeq gene 4246277 4247632 . - . ID=gene3943;Name=YPC_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19755;old_locus_tag=YPC_4383 NC_017265.1 Protein Homology CDS 4246277 4247632 . - 0 ID=cds3842;Parent=gene3943;Dbxref=Genbank:WP_002210039.1;Name=WP_002210039.1;gbkey=CDS;product=xanthine/uracil permease;protein_id=WP_002210039.1;transl_table=11 NC_017265.1 RefSeq gene 4248086 4248289 . + . ID=gene3944;Name=YPC_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19760;old_locus_tag=YPC_4384 NC_017265.1 Protein Homology CDS 4248086 4248289 . + 0 ID=cds3843;Parent=gene3944;Dbxref=Genbank:WP_002210038.1;Name=WP_002210038.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_002210038.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4248367 4248534 . + . ID=id347;gbkey=repeat_region NC_017265.1 RefSeq gene 4248908 4249723 . - . ID=gene3945;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YPC_RS19765;old_locus_tag=YPC_4387 NC_017265.1 Protein Homology CDS 4248908 4249723 . - 0 ID=cds3844;Parent=gene3945;Dbxref=Genbank:WP_002210036.1;Name=WP_002210036.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_002210036.1;transl_table=11 NC_017265.1 RefSeq gene 4249720 4250514 . - . ID=gene3946;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YPC_RS19770;old_locus_tag=YPC_4388 NC_017265.1 Protein Homology CDS 4249720 4250514 . - 0 ID=cds3845;Parent=gene3946;Dbxref=Genbank:WP_002213853.1;Name=WP_002213853.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_002213853.1;transl_table=11 NC_017265.1 RefSeq gene 4250526 4251674 . - . ID=gene3947;Name=YPC_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19775;old_locus_tag=YPC_4389 NC_017265.1 Protein Homology CDS 4250526 4251674 . - 0 ID=cds3846;Parent=gene3947;Dbxref=Genbank:WP_002210034.1;Name=WP_002210034.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_002210034.1;transl_table=11 NC_017265.1 RefSeq gene 4251693 4252814 . - . ID=gene3948;Name=YPC_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19780;old_locus_tag=YPC_4390 NC_017265.1 Protein Homology CDS 4251693 4252814 . - 0 ID=cds3847;Parent=gene3948;Dbxref=Genbank:WP_002210033.1;Name=WP_002210033.1;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_002210033.1;transl_table=11 NC_017265.1 RefSeq gene 4252829 4253410 . - . ID=gene3949;Name=YPC_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19785;old_locus_tag=YPC_4391 NC_017265.1 Protein Homology CDS 4252829 4253410 . - 0 ID=cds3848;Parent=gene3949;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11 NC_017265.1 RefSeq gene 4253881 4254582 . + . ID=gene3950;Name=YPC_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19790;old_locus_tag=YPC_4393 NC_017265.1 Protein Homology CDS 4253881 4254582 . + 0 ID=cds3849;Parent=gene3950;Dbxref=Genbank:WP_002210030.1;Name=WP_002210030.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002210030.1;transl_table=11 NC_017265.1 RefSeq gene 4254739 4255668 . + . ID=gene3951;Name=YPC_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19795;old_locus_tag=YPC_4395 NC_017265.1 Protein Homology CDS 4254739 4255668 . + 0 ID=cds3850;Parent=gene3951;Dbxref=Genbank:WP_002210028.1;Name=WP_002210028.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002210028.1;transl_table=11 NC_017265.1 RefSeq gene 4255674 4256177 . + . ID=gene3952;Name=YPC_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19800;old_locus_tag=YPC_4396 NC_017265.1 Protein Homology CDS 4255674 4256177 . + 0 ID=cds3851;Parent=gene3952;Dbxref=Genbank:WP_002210027.1;Name=WP_002210027.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_002210027.1;transl_table=11 NC_017265.1 RefSeq gene 4256339 4257205 . - . ID=gene3953;Name=YPC_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19805;old_locus_tag=YPC_4398 NC_017265.1 Protein Homology CDS 4256339 4257205 . - 0 ID=cds3852;Parent=gene3953;Dbxref=Genbank:WP_002210026.1;Name=WP_002210026.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210026.1;transl_table=11 NC_017265.1 RefSeq gene 4257475 4258605 . + . ID=gene3954;Name=YPC_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19810;old_locus_tag=YPC_4399 NC_017265.1 Protein Homology CDS 4257475 4258605 . + 0 ID=cds3853;Parent=gene3954;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11 NC_017265.1 RefSeq gene 4258602 4259501 . + . ID=gene3955;Name=YPC_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19815;old_locus_tag=YPC_4400 NC_017265.1 Protein Homology CDS 4258602 4259501 . + 0 ID=cds3854;Parent=gene3955;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11 NC_017265.1 RefSeq gene 4259848 4260642 . - . ID=gene3956;Name=YPC_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19820;old_locus_tag=YPC_4401 NC_017265.1 Protein Homology CDS 4259848 4260642 . - 0 ID=cds3855;Parent=gene3956;Dbxref=Genbank:WP_002210023.1;Name=WP_002210023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210023.1;transl_table=11 NC_017265.1 RefSeq gene 4260651 4265189 . - . ID=gene3957;Name=YPC_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19825;old_locus_tag=YPC_4402 NC_017265.1 Protein Homology CDS 4260651 4265189 . - 0 ID=cds3856;Parent=gene3957;Dbxref=Genbank:WP_002210022.1;Name=WP_002210022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210022.1;transl_table=11 NC_017265.1 RefSeq gene 4265234 4265656 . - . ID=gene3958;Name=YPC_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19830;old_locus_tag=YPC_4403 NC_017265.1 Protein Homology CDS 4265234 4265656 . - 0 ID=cds3857;Parent=gene3958;Dbxref=Genbank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213861.1;transl_table=11 NC_017265.1 RefSeq gene 4265659 4267857 . - . ID=gene3959;Name=YPC_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19835;old_locus_tag=YPC_4404 NC_017265.1 Protein Homology CDS 4265659 4267857 . - 0 ID=cds3858;Parent=gene3959;Dbxref=Genbank:WP_015683775.1;Name=WP_015683775.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_015683775.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4266039 4268111 . + . ID=id348;gbkey=repeat_region NC_017265.1 RefSeq gene 4268218 4268625 . + . ID=gene3960;Name=YPC_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19845;old_locus_tag=YPC_4406 NC_017265.1 Protein Homology CDS 4268218 4268625 . + 0 ID=cds3859;Parent=gene3960;Dbxref=Genbank:WP_002210018.1;Name=WP_002210018.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210018.1;transl_table=11 NC_017265.1 RefSeq gene 4268707 4268931 . + . ID=gene3961;Name=YPC_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19850;old_locus_tag=YPC_4407 NC_017265.1 Protein Homology CDS 4268707 4268931 . + 0 ID=cds3860;Parent=gene3961;Dbxref=Genbank:WP_002213866.1;Name=WP_002213866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213866.1;transl_table=11 NC_017265.1 RefSeq gene 4269055 4269198 . + . ID=gene3962;Name=YPC_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19855 NC_017265.1 Protein Homology CDS 4269055 4269198 . + 0 ID=cds3861;Parent=gene3962;Dbxref=Genbank:WP_002210017.1;Name=WP_002210017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210017.1;transl_table=11 NC_017265.1 RefSeq gene 4269248 4269733 . - . ID=gene3963;Name=YPC_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19860;old_locus_tag=YPC_4409 NC_017265.1 Protein Homology CDS 4269248 4269733 . - 0 ID=cds3862;Parent=gene3963;Dbxref=Genbank:WP_002213869.1;Name=WP_002213869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213869.1;transl_table=11 NC_017265.1 RefSeq gene 4269735 4271106 . - . ID=gene3964;Name=YPC_RS19865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS19865;pseudo=true NC_017265.1 Protein Homology CDS 4269735 4271106 . - 0 ID=cds3863;Parent=gene3964;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4271134 4273999 . - . ID=gene3965;Name=YPC_RS19870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS19870;pseudo=true NC_017265.1 Protein Homology CDS 4271134 4273999 . - 0 ID=cds3864;Parent=gene3965;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4273992 4274450 . - . ID=gene3966;Name=YPC_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19875;old_locus_tag=YPC_4414 NC_017265.1 Protein Homology CDS 4273992 4274450 . - 0 ID=cds3865;Parent=gene3966;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11 NC_017265.1 RefSeq gene 4274456 4276858 . - . ID=gene3967;Name=YPC_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19880;old_locus_tag=YPC_4415 NC_017265.1 Protein Homology CDS 4274456 4276858 . - 0 ID=cds3866;Parent=gene3967;Dbxref=Genbank:WP_015683778.1;Name=WP_015683778.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_015683778.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4274860 4276591 . + . ID=id349;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4276615 4277112 . + . ID=id350;gbkey=repeat_region NC_017265.1 RefSeq gene 4276880 4277413 . - . ID=gene3968;Name=YPC_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19885;old_locus_tag=YPC_4416 NC_017265.1 Protein Homology CDS 4276880 4277413 . - 0 ID=cds3867;Parent=gene3968;Dbxref=Genbank:WP_002213878.1;Name=WP_002213878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213878.1;transl_table=11 NC_017265.1 RefSeq gene 4277410 4278192 . - . ID=gene3969;Name=YPC_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19890;old_locus_tag=YPC_4417 NC_017265.1 Protein Homology CDS 4277410 4278192 . - 0 ID=cds3868;Parent=gene3969;Dbxref=Genbank:WP_015683779.1;Name=WP_015683779.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683779.1;transl_table=11 NC_017265.1 RefSeq gene 4278317 4281850 . - . ID=gene3970;Name=YPC_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19895;old_locus_tag=YPC_4418 NC_017265.1 Protein Homology CDS 4278317 4281850 . - 0 ID=cds3869;Parent=gene3970;Dbxref=Genbank:WP_002212111.1;Name=WP_002212111.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002212111.1;transl_table=11 NC_017265.1 RefSeq gene 4281882 4283270 . - . ID=gene3971;Name=YPC_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19900;old_locus_tag=YPC_4419 NC_017265.1 Protein Homology CDS 4281882 4283270 . - 0 ID=cds3870;Parent=gene3971;Dbxref=Genbank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212110.1;transl_table=11 NC_017265.1 RefSeq gene 4283276 4283962 . - . ID=gene3972;Name=YPC_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19905;old_locus_tag=YPC_4420 NC_017265.1 Protein Homology CDS 4283276 4283962 . - 0 ID=cds3871;Parent=gene3972;Dbxref=Genbank:WP_002212109.1;Name=WP_002212109.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212109.1;transl_table=11 NC_017265.1 RefSeq gene 4283959 4284756 . - . ID=gene3973;Name=YPC_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19910;old_locus_tag=YPC_4421 NC_017265.1 Protein Homology CDS 4283959 4284756 . - 0 ID=cds3872;Parent=gene3973;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11 NC_017265.1 RefSeq gene 4284753 4287356 . - . ID=gene3974;Name=YPC_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19915;old_locus_tag=YPC_4422 NC_017265.1 Protein Homology CDS 4284753 4287356 . - 0 ID=cds3873;Parent=gene3974;Dbxref=Genbank:WP_002212107.1;Name=WP_002212107.1;gbkey=CDS;product=ATP-dependent Clp protease ClpV;protein_id=WP_002212107.1;transl_table=11 NC_017265.1 RefSeq gene 4287367 4288119 . - . ID=gene3975;Name=YPC_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19920;old_locus_tag=YPC_4423 NC_017265.1 Protein Homology CDS 4287367 4288119 . - 0 ID=cds3874;Parent=gene3975;Dbxref=Genbank:WP_002355154.1;Name=WP_002355154.1;gbkey=CDS;product=chemotaxis protein MotB;protein_id=WP_002355154.1;transl_table=11 NC_017265.1 RefSeq gene 4288134 4289480 . - . ID=gene3976;Name=YPC_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19925;old_locus_tag=YPC_4424 NC_017265.1 Protein Homology CDS 4288134 4289480 . - 0 ID=cds3875;Parent=gene3976;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11 NC_017265.1 RefSeq gene 4289483 4290028 . - . ID=gene3977;Name=YPC_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19930;old_locus_tag=YPC_4425 NC_017265.1 Protein Homology CDS 4289483 4290028 . - 0 ID=cds3876;Parent=gene3977;Dbxref=Genbank:WP_002212104.1;Name=WP_002212104.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212104.1;transl_table=11 NC_017265.1 RefSeq gene 4290028 4291343 . - . ID=gene3978;Name=YPC_RS19935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS19935;old_locus_tag=YPC_4427;pseudo=true NC_017265.1 Protein Homology CDS 4290028 4291343 . - 0 ID=cds3877;Parent=gene3978;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphopeptide-binding protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4291469 4292557 . - . ID=gene3979;Name=YPC_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19940;old_locus_tag=YPC_4428 NC_017265.1 Protein Homology CDS 4291469 4292557 . - 0 ID=cds3878;Parent=gene3979;Dbxref=Genbank:WP_002213885.1;Name=WP_002213885.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002213885.1;transl_table=11 NC_017265.1 RefSeq gene 4292521 4293264 . - . ID=gene3980;Name=YPC_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19945;old_locus_tag=YPC_4429 NC_017265.1 Protein Homology CDS 4292521 4293264 . - 0 ID=cds3879;Parent=gene3980;Dbxref=Genbank:WP_002228704.1;Name=WP_002228704.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002228704.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4293259 4294916 . + . ID=id351;gbkey=repeat_region NC_017265.1 RefSeq gene 4293315 4293830 . + . ID=gene3981;Name=YPC_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19950 NC_017265.1 Protein Homology CDS 4293315 4293830 . + 0 ID=cds3880;Parent=gene3981;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_017265.1 RefSeq gene 4293884 4294669 . + . ID=gene3982;Name=YPC_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19955;old_locus_tag=YPC_4431 NC_017265.1 Protein Homology CDS 4293884 4294669 . + 0 ID=cds3881;Parent=gene3982;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_017265.1 RefSeq gene 4295024 4295293 . - . ID=gene3983;Name=YPC_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19960 NC_017265.1 Protein Homology CDS 4295024 4295293 . - 0 ID=cds3882;Parent=gene3983;Dbxref=Genbank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11 NC_017265.1 RefSeq gene 4295458 4295922 . - . ID=gene3984;Name=YPC_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19965;old_locus_tag=YPC_4433 NC_017265.1 Protein Homology CDS 4295458 4295922 . - 0 ID=cds3883;Parent=gene3984;Dbxref=Genbank:WP_002209495.1;Name=WP_002209495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209495.1;transl_table=11 NC_017265.1 RefSeq gene 4296231 4296605 . - . ID=gene3985;Name=YPC_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19970;old_locus_tag=YPC_4434 NC_017265.1 Protein Homology CDS 4296231 4296605 . - 0 ID=cds3884;Parent=gene3985;Dbxref=Genbank:WP_002217865.1;Name=WP_002217865.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217865.1;transl_table=11 NC_017265.1 RefSeq gene 4297004 4298518 . + . ID=gene3986;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=YPC_RS19975;old_locus_tag=YPC_4435 NC_017265.1 Protein Homology CDS 4297004 4298518 . + 0 ID=cds3885;Parent=gene3986;Dbxref=Genbank:WP_002220236.1;Name=WP_002220236.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002220236.1;transl_table=11 NC_017265.1 RefSeq gene 4298681 4301128 . - . ID=gene3987;Name=YPC_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19980;old_locus_tag=YPC_4436 NC_017265.1 Protein Homology CDS 4298681 4301128 . - 0 ID=cds3886;Parent=gene3987;Dbxref=Genbank:WP_002209497.1;Name=WP_002209497.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_002209497.1;transl_table=11 NC_017265.1 RefSeq gene 4301297 4302727 . - . ID=gene3988;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YPC_RS19985;old_locus_tag=YPC_4437 NC_017265.1 Protein Homology CDS 4301297 4302727 . - 0 ID=cds3887;Parent=gene3988;Dbxref=Genbank:WP_002209498.1;Name=WP_002209498.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_002209498.1;transl_table=11 NC_017265.1 RefSeq gene 4302938 4304224 . - . ID=gene3989;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YPC_RS19990;old_locus_tag=YPC_4439 NC_017265.1 Protein Homology CDS 4302938 4304224 . - 0 ID=cds3888;Parent=gene3989;Dbxref=Genbank:WP_012105899.1;Name=WP_012105899.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_012105899.1;transl_table=11 NC_017265.1 RefSeq gene 4304234 4306222 . - . ID=gene3990;Name=YPC_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS19995;old_locus_tag=YPC_4440 NC_017265.1 Protein Homology CDS 4304234 4306222 . - 0 ID=cds3889;Parent=gene3990;Dbxref=Genbank:WP_002209499.1;Name=WP_002209499.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_002209499.1;transl_table=11 NC_017265.1 RefSeq gene 4306224 4308407 . - . ID=gene3991;Name=YPC_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20000;old_locus_tag=YPC_4441 NC_017265.1 Protein Homology CDS 4306224 4308407 . - 0 ID=cds3890;Parent=gene3991;Dbxref=Genbank:WP_015683783.1;Name=WP_015683783.1;gbkey=CDS;product=glycogen branching protein;protein_id=WP_015683783.1;transl_table=11 NC_017265.1 RefSeq gene 4308913 4310610 . + . ID=gene3992;Name=YPC_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20005;old_locus_tag=YPC_4442 NC_017265.1 Protein Homology CDS 4308913 4310610 . + 0 ID=cds3891;Parent=gene3992;Dbxref=Genbank:WP_002209502.1;Name=WP_002209502.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002209502.1;transl_table=11 NC_017265.1 RefSeq gene 4310818 4316536 . - . ID=gene3993;Name=YPC_RS22075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS22075;pseudo=true NC_017265.1 Protein Homology CDS 4310818 4316536 . - 0 ID=cds3892;Parent=gene3993;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq repeat_region 4315320 4315531 . + . ID=id352;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4316118 4317120 . + . ID=id353;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4317310 4317411 . + . ID=id354;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4317598 4317699 . + . ID=id355;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4318177 4318348 . + . ID=id356;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4318756 4318857 . + . ID=id357;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4319016 4319218 . + . ID=id358;gbkey=repeat_region NC_017265.1 RefSeq repeat_region 4319889 4320748 . + . ID=id359;gbkey=repeat_region NC_017265.1 RefSeq gene 4324935 4325276 . + . ID=gene3994;Name=YPC_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20015;old_locus_tag=YPC_4445 NC_017265.1 Protein Homology CDS 4324935 4325276 . + 0 ID=cds3893;Parent=gene3994;Dbxref=Genbank:WP_011171941.1;Name=WP_011171941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171941.1;transl_table=11 NC_017265.1 RefSeq gene 4325367 4325654 . - . ID=gene3995;Name=YPC_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20020;old_locus_tag=YPC_4446 NC_017265.1 Protein Homology CDS 4325367 4325654 . - 0 ID=cds3894;Parent=gene3995;Dbxref=Genbank:WP_002209504.1;Name=WP_002209504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209504.1;transl_table=11 NC_017265.1 RefSeq gene 4325661 4325960 . - . ID=gene3996;Name=YPC_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20025 NC_017265.1 Protein Homology CDS 4325661 4325960 . - 0 ID=cds3895;Parent=gene3996;Dbxref=Genbank:WP_002209505.1;Name=WP_002209505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209505.1;transl_table=11 NC_017265.1 RefSeq gene 4326276 4326557 . - . ID=gene3997;Name=YPC_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20030;old_locus_tag=YPC_4449 NC_017265.1 Protein Homology CDS 4326276 4326557 . - 0 ID=cds3896;Parent=gene3997;Dbxref=Genbank:WP_002214584.1;Name=WP_002214584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214584.1;transl_table=11 NC_017265.1 RefSeq gene 4326726 4327829 . - . ID=gene3998;Name=YPC_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20035;old_locus_tag=YPC_4450 NC_017265.1 Protein Homology CDS 4326726 4327829 . - 0 ID=cds3897;Parent=gene3998;Dbxref=Genbank:WP_002209507.1;Name=WP_002209507.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NC_017265.1 RefSeq gene 4328187 4328780 . + . ID=gene3999;Name=YPC_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20040;old_locus_tag=YPC_4451 NC_017265.1 Protein Homology CDS 4328187 4328780 . + 0 ID=cds3898;Parent=gene3999;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4328871 4328973 . + . ID=id360;gbkey=repeat_region NC_017265.1 RefSeq gene 4329020 4329409 . - . ID=gene4000;Name=YPC_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20045;old_locus_tag=YPC_4452 NC_017265.1 Protein Homology CDS 4329020 4329409 . - 0 ID=cds3899;Parent=gene4000;Dbxref=Genbank:WP_002209509.1;Name=WP_002209509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209509.1;transl_table=11 NC_017265.1 RefSeq gene 4329464 4329604 . - . ID=gene4001;Name=YPC_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20050;old_locus_tag=YPC_4453 NC_017265.1 Protein Homology CDS 4329464 4329604 . - 0 ID=cds3900;Parent=gene4001;Dbxref=Genbank:WP_002209510.1;Name=WP_002209510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209510.1;transl_table=11 NC_017265.1 RefSeq gene 4329795 4330028 . - . ID=gene4002;Name=YPC_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20055;old_locus_tag=YPC_4454 NC_017265.1 Protein Homology CDS 4329795 4330028 . - 0 ID=cds3901;Parent=gene4002;Dbxref=Genbank:WP_002209511.1;Name=WP_002209511.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002209511.1;transl_table=11 NC_017265.1 RefSeq gene 4330211 4330714 . - . ID=gene4003;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPC_RS20060;old_locus_tag=YPC_4455 NC_017265.1 Protein Homology CDS 4330211 4330714 . - 0 ID=cds3902;Parent=gene4003;Dbxref=Genbank:WP_015683786.1;Name=WP_015683786.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_015683786.1;transl_table=11 NC_017265.1 RefSeq gene 4330931 4332247 . + . ID=gene4004;Name=YPC_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20065;old_locus_tag=YPC_4457 NC_017265.1 Protein Homology CDS 4330931 4332247 . + 0 ID=cds3903;Parent=gene4004;Dbxref=Genbank:WP_015683787.1;Name=WP_015683787.1;gbkey=CDS;product=idonate transporter;protein_id=WP_015683787.1;transl_table=11 NC_017265.1 RefSeq gene 4332339 4333334 . - . ID=gene4005;Name=YPC_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20070;old_locus_tag=YPC_4459 NC_017265.1 Protein Homology CDS 4332339 4333334 . - 0 ID=cds3904;Parent=gene4005;Dbxref=Genbank:WP_002209514.1;Name=WP_002209514.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209514.1;transl_table=11 NC_017265.1 RefSeq gene 4333463 4334158 . - . ID=gene4006;Name=YPC_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20075;old_locus_tag=YPC_4460 NC_017265.1 Protein Homology CDS 4333463 4334158 . - 0 ID=cds3905;Parent=gene4006;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11 NC_017265.1 RefSeq gene 4334375 4334482 . - . ID=gene4007;Name=ryhB;gbkey=Gene;gene=ryhB;gene_biotype=antisense_RNA;locus_tag=YPC_RS22040 NC_017265.1 RefSeq ncRNA 4334375 4334482 . - . ID=rna95;Parent=gene4007;Dbxref=ASAP:BBE-0004889,ASAP:BBE-0004889 ERIC;gbkey=ncRNA;gene=ryhB;ncrna_class=antisense_RNA;product=regulatory antisense RNA NC_017265.1 RefSeq exon 4334375 4334482 . - . ID=id361;Parent=rna95;Dbxref=ASAP:BBE-0004889,ASAP:BBE-0004889 ERIC;gbkey=ncRNA;gene=ryhB;ncrna_class=antisense_RNA;product=regulatory antisense RNA NC_017265.1 RefSeq gene 4334653 4334922 . + . ID=gene4008;Name=YPC_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20080;old_locus_tag=YPC_4462 NC_017265.1 Protein Homology CDS 4334653 4334922 . + 0 ID=cds3906;Parent=gene4008;Dbxref=Genbank:WP_002215491.1;Name=WP_002215491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215491.1;transl_table=11 NC_017265.1 RefSeq gene 4334922 4335659 . + . ID=gene4009;Name=YPC_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20085;old_locus_tag=YPC_4463 NC_017265.1 Protein Homology CDS 4334922 4335659 . + 0 ID=cds3907;Parent=gene4009;Dbxref=Genbank:WP_002209516.1;Name=WP_002209516.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209516.1;transl_table=11 NC_017265.1 RefSeq gene 4335844 4336851 . - . ID=gene4010;Name=YPC_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20090;old_locus_tag=YPC_4464 NC_017265.1 Protein Homology CDS 4335844 4336851 . - 0 ID=cds3908;Parent=gene4010;Dbxref=Genbank:WP_002209518.1;Name=WP_002209518.1;gbkey=CDS;product=sugar kinase;protein_id=WP_002209518.1;transl_table=11 NC_017265.1 RefSeq gene 4336861 4337721 . - . ID=gene4011;Name=YPC_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20095;old_locus_tag=YPC_4465 NC_017265.1 Protein Homology CDS 4336861 4337721 . - 0 ID=cds3909;Parent=gene4011;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11 NC_017265.1 RefSeq gene 4337747 4338430 . - . ID=gene4012;Name=YPC_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20100;old_locus_tag=YPC_4466 NC_017265.1 Protein Homology CDS 4337747 4338430 . - 0 ID=cds3910;Parent=gene4012;Dbxref=Genbank:WP_002209520.1;Name=WP_002209520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209520.1;transl_table=11 NC_017265.1 RefSeq gene 4338505 4339449 . - . ID=gene4013;Name=YPC_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20105;old_locus_tag=YPC_4467 NC_017265.1 Protein Homology CDS 4338505 4339449 . - 0 ID=cds3911;Parent=gene4013;Dbxref=Genbank:WP_015683788.1;Name=WP_015683788.1;gbkey=CDS;product=sugar-binding transporter;protein_id=WP_015683788.1;transl_table=11 NC_017265.1 RefSeq gene 4339480 4340472 . - . ID=gene4014;Name=YPC_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20110;old_locus_tag=YPC_4468 NC_017265.1 Protein Homology CDS 4339480 4340472 . - 0 ID=cds3912;Parent=gene4014;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11 NC_017265.1 RefSeq gene 4340465 4341988 . - . ID=gene4015;Name=YPC_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20115;old_locus_tag=YPC_4469 NC_017265.1 Protein Homology CDS 4340465 4341988 . - 0 ID=cds3913;Parent=gene4015;Dbxref=Genbank:WP_002209523.1;Name=WP_002209523.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=WP_002209523.1;transl_table=11 NC_017265.1 RefSeq gene 4342177 4344732 . + . ID=gene4016;Name=YPC_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20120;old_locus_tag=YPC_4470 NC_017265.1 Protein Homology CDS 4342177 4344732 . + 0 ID=cds3914;Parent=gene4016;Dbxref=Genbank:WP_002209524.1;Name=WP_002209524.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209524.1;transl_table=11 NC_017265.1 RefSeq gene 4344868 4346064 . - . ID=gene4017;Name=YPC_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20125;old_locus_tag=YPC_4471 NC_017265.1 Protein Homology CDS 4344868 4346064 . - 0 ID=cds3915;Parent=gene4017;Dbxref=Genbank:WP_002215486.1;Name=WP_002215486.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215486.1;transl_table=11 NC_017265.1 RefSeq gene 4346375 4347871 . + . ID=gene4018;Name=YPC_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20130;old_locus_tag=YPC_4472 NC_017265.1 Protein Homology CDS 4346375 4347871 . + 0 ID=cds3916;Parent=gene4018;Dbxref=Genbank:WP_015683789.1;Name=WP_015683789.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_015683789.1;transl_table=11 NC_017265.1 RefSeq gene 4347977 4348147 . + . ID=gene4019;Name=YPC_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20135 NC_017265.1 Protein Homology CDS 4347977 4348147 . + 0 ID=cds3917;Parent=gene4019;Dbxref=Genbank:WP_025470767.1;Name=WP_025470767.1;gbkey=CDS;product=transposase;protein_id=WP_025470767.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4347981 4348708 . + . ID=id362;gbkey=repeat_region NC_017265.1 RefSeq gene 4348086 4348595 . + . ID=gene4020;Name=YPC_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20140;old_locus_tag=YPC_4474 NC_017265.1 Protein Homology CDS 4348086 4348595 . + 0 ID=cds3918;Parent=gene4020;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11 NC_017265.1 RefSeq gene 4348728 4349063 . - . ID=gene4021;Name=YPC_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20145;old_locus_tag=YPC_4475 NC_017265.1 Protein Homology CDS 4348728 4349063 . - 0 ID=cds3919;Parent=gene4021;Dbxref=Genbank:WP_002209527.1;Name=WP_002209527.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002209527.1;transl_table=11 NC_017265.1 RefSeq gene 4349771 4350217 . + . ID=gene4022;Name=YPC_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20150;old_locus_tag=YPC_4476 NC_017265.1 Protein Homology CDS 4349771 4350217 . + 0 ID=cds3920;Parent=gene4022;Dbxref=Genbank:WP_002209528.1;Name=WP_002209528.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_002209528.1;transl_table=11 NC_017265.1 RefSeq gene 4350464 4351807 . + . ID=gene4023;Name=YPC_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20155;old_locus_tag=YPC_4477 NC_017265.1 Protein Homology CDS 4350464 4351807 . + 0 ID=cds3921;Parent=gene4023;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NC_017265.1 RefSeq gene 4352055 4353389 . + . ID=gene4024;Name=YPC_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20160;old_locus_tag=YPC_4478 NC_017265.1 Protein Homology CDS 4352055 4353389 . + 0 ID=cds3922;Parent=gene4024;Dbxref=Genbank:WP_002209530.1;Name=WP_002209530.1;gbkey=CDS;product=peptidase M10;protein_id=WP_002209530.1;transl_table=11 NC_017265.1 RefSeq gene 4353454 4354224 . - . ID=gene4025;Name=YPC_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20165;old_locus_tag=YPC_4479 NC_017265.1 Protein Homology CDS 4353454 4354224 . - 0 ID=cds3923;Parent=gene4025;Dbxref=Genbank:WP_015683790.1;Name=WP_015683790.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=methyltransferase;protein_id=WP_015683790.1;transl_table=11 NC_017265.1 RefSeq gene 4354228 4356270 . - . ID=gene4026;Name=YPC_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20170;old_locus_tag=YPC_4480 NC_017265.1 Protein Homology CDS 4354228 4356270 . - 0 ID=cds3924;Parent=gene4026;Dbxref=Genbank:WP_002209531.1;Name=WP_002209531.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_002209531.1;transl_table=11 NC_017265.1 RefSeq gene 4356599 4357441 . + . ID=gene4027;Name=YPC_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20175;old_locus_tag=YPC_4482 NC_017265.1 Protein Homology CDS 4356599 4357441 . + 0 ID=cds3925;Parent=gene4027;Dbxref=Genbank:WP_002209533.1;Name=WP_002209533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209533.1;transl_table=11 NC_017265.1 RefSeq gene 4357627 4358979 . + . ID=gene4028;Name=YPC_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20180;old_locus_tag=YPC_4483 NC_017265.1 Protein Homology CDS 4357627 4358979 . + 0 ID=cds3926;Parent=gene4028;Dbxref=Genbank:WP_002209534.1;Name=WP_002209534.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_002209534.1;transl_table=11 NC_017265.1 RefSeq gene 4359171 4360298 . + . ID=gene4029;Name=YPC_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20185;old_locus_tag=YPC_4484 NC_017265.1 Protein Homology CDS 4359171 4360298 . + 0 ID=cds3927;Parent=gene4029;Dbxref=Genbank:WP_002209535.1;Name=WP_002209535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209535.1;transl_table=11 NC_017265.1 RefSeq gene 4360476 4361744 . + . ID=gene4030;Name=YPC_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20190;old_locus_tag=YPC_4487 NC_017265.1 Protein Homology CDS 4360476 4361744 . + 0 ID=cds3928;Parent=gene4030;Dbxref=Genbank:WP_002209536.1;Name=WP_002209536.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_002209536.1;transl_table=11 NC_017265.1 RefSeq gene 4361755 4362891 . + . ID=gene4031;Name=YPC_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20195;old_locus_tag=YPC_4488 NC_017265.1 Protein Homology CDS 4361755 4362891 . + 0 ID=cds3929;Parent=gene4031;Dbxref=Genbank:WP_002209537.1;Name=WP_002209537.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_002209537.1;transl_table=11 NC_017265.1 RefSeq gene 4363137 4363643 . - . ID=gene4032;Name=YPC_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20200;old_locus_tag=YPC_4489 NC_017265.1 Protein Homology CDS 4363137 4363643 . - 0 ID=cds3930;Parent=gene4032;Dbxref=Genbank:WP_002209538.1;Name=WP_002209538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209538.1;transl_table=11 NC_017265.1 RefSeq gene 4363711 4364208 . - . ID=gene4033;Name=YPC_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20205;old_locus_tag=YPC_4490 NC_017265.1 Protein Homology CDS 4363711 4364208 . - 0 ID=cds3931;Parent=gene4033;Dbxref=Genbank:WP_002209539.1;Name=WP_002209539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209539.1;transl_table=11 NC_017265.1 RefSeq gene 4364210 4364989 . - . ID=gene4034;Name=YPC_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20210;old_locus_tag=YPC_4491 NC_017265.1 Protein Homology CDS 4364210 4364989 . - 0 ID=cds3932;Parent=gene4034;Dbxref=Genbank:WP_002209540.1;Name=WP_002209540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209540.1;transl_table=11 NC_017265.1 RefSeq gene 4365167 4368379 . - . ID=gene4035;Name=YPC_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20215;old_locus_tag=YPC_4492 NC_017265.1 Protein Homology CDS 4365167 4368379 . - 0 ID=cds3933;Parent=gene4035;Dbxref=Genbank:WP_002214773.1;Name=WP_002214773.1;gbkey=CDS;product=autotransporter;protein_id=WP_002214773.1;transl_table=11 NC_017265.1 RefSeq gene 4369057 4370139 . + . ID=gene4036;Name=YPC_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20220;old_locus_tag=YPC_4493 NC_017265.1 Protein Homology CDS 4369057 4370139 . + 0 ID=cds3934;Parent=gene4036;Dbxref=Genbank:WP_002209545.1;Name=WP_002209545.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209545.1;transl_table=11 NC_017265.1 RefSeq gene 4370143 4370940 . + . ID=gene4037;Name=YPC_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20225;old_locus_tag=YPC_4494 NC_017265.1 Protein Homology CDS 4370143 4370940 . + 0 ID=cds3935;Parent=gene4037;Dbxref=Genbank:WP_002209546.1;Name=WP_002209546.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_002209546.1;transl_table=11 NC_017265.1 RefSeq gene 4370917 4373132 . - . ID=gene4038;Name=YPC_RS20230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS20230;pseudo=true NC_017265.1 Protein Homology CDS 4370917 4373132 . - 0 ID=cds3936;Parent=gene4038;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017265.1 RefSeq gene 4373437 4374282 . - . ID=gene4039;Name=YPC_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20235;old_locus_tag=YPC_4497 NC_017265.1 Protein Homology CDS 4373437 4374282 . - 0 ID=cds3937;Parent=gene4039;Dbxref=Genbank:WP_002209547.1;Name=WP_002209547.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=WP_002209547.1;transl_table=11 NC_017265.1 RefSeq gene 4374501 4374701 . + . ID=gene4040;Name=YPC_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20240;old_locus_tag=YPC_4498 NC_017265.1 Protein Homology CDS 4374501 4374701 . + 0 ID=cds3938;Parent=gene4040;Dbxref=Genbank:WP_002209548.1;Name=WP_002209548.1;gbkey=CDS;product=tautomerase;protein_id=WP_002209548.1;transl_table=11 NC_017265.1 RefSeq gene 4374980 4375924 . + . ID=gene4041;Name=YPC_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20245;old_locus_tag=YPC_4499 NC_017265.1 Protein Homology CDS 4374980 4375924 . + 0 ID=cds3939;Parent=gene4041;Dbxref=Genbank:WP_002209549.1;Name=WP_002209549.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NC_017265.1 RefSeq gene 4376088 4377587 . - . ID=gene4042;Name=YPC_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20250;old_locus_tag=YPC_4500 NC_017265.1 Protein Homology CDS 4376088 4377587 . - 0 ID=cds3940;Parent=gene4042;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11 NC_017265.1 RefSeq gene 4377952 4379241 . - . ID=gene4043;Name=YPC_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20255;old_locus_tag=YPC_4501 NC_017265.1 Protein Homology CDS 4377952 4379241 . - 0 ID=cds3941;Parent=gene4043;Dbxref=Genbank:WP_002209553.1;Name=WP_002209553.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_002209553.1;transl_table=11 NC_017265.1 RefSeq gene 4379696 4380175 . - . ID=gene4044;Name=YPC_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20260;old_locus_tag=YPC_4502 NC_017265.1 Protein Homology CDS 4379696 4380175 . - 0 ID=cds3942;Parent=gene4044;Dbxref=Genbank:WP_002209554.1;Name=WP_002209554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209554.1;transl_table=11 NC_017265.1 RefSeq gene 4380300 4382018 . - . ID=gene4045;Name=YPC_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20265;old_locus_tag=YPC_4503 NC_017265.1 Protein Homology CDS 4380300 4382018 . - 0 ID=cds3943;Parent=gene4045;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NC_017265.1 RefSeq gene 4382264 4382968 . - . ID=gene4046;Name=YPC_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20270;old_locus_tag=YPC_4504 NC_017265.1 Protein Homology CDS 4382264 4382968 . - 0 ID=cds3944;Parent=gene4046;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11 NC_017265.1 RefSeq gene 4383608 4385590 . - . ID=gene4047;Name=YPC_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20275;old_locus_tag=YPC_4505 NC_017265.1 Protein Homology CDS 4383608 4385590 . - 0 ID=cds3945;Parent=gene4047;Dbxref=Genbank:WP_002214767.1;Name=WP_002214767.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_002214767.1;transl_table=11 NC_017265.1 RefSeq gene 4385937 4386836 . - . ID=gene4048;Name=YPC_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20280;old_locus_tag=YPC_4507 NC_017265.1 Protein Homology CDS 4385937 4386836 . - 0 ID=cds3946;Parent=gene4048;Dbxref=Genbank:WP_002214765.1;Name=WP_002214765.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endonuclease III;protein_id=WP_002214765.1;transl_table=11 NC_017265.1 RefSeq gene 4387155 4388162 . - . ID=gene4049;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YPC_RS20285;old_locus_tag=YPC_4508 NC_017265.1 Protein Homology CDS 4387155 4388162 . - 0 ID=cds3947;Parent=gene4049;Dbxref=Genbank:WP_002228160.1;Name=WP_002228160.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002228160.1;transl_table=11 NC_017265.1 RefSeq gene 4388228 4389208 . - . ID=gene4050;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YPC_RS20290;old_locus_tag=YPC_4509 NC_017265.1 Protein Homology CDS 4388228 4389208 . - 0 ID=cds3948;Parent=gene4050;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NC_017265.1 RefSeq gene 4389222 4390124 . - . ID=gene4051;Name=YPC_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20295;old_locus_tag=YPC_4510 NC_017265.1 Protein Homology CDS 4389222 4390124 . - 0 ID=cds3949;Parent=gene4051;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11 NC_017265.1 RefSeq gene 4390206 4391153 . - . ID=gene4052;Name=YPC_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20300;old_locus_tag=YPC_4512 NC_017265.1 Protein Homology CDS 4390206 4391153 . - 0 ID=cds3950;Parent=gene4052;Dbxref=Genbank:WP_002217330.1;Name=WP_002217330.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002217330.1;transl_table=11 NC_017265.1 RefSeq gene 4391436 4393043 . - . ID=gene4053;Name=YPC_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20305;old_locus_tag=YPC_4513 NC_017265.1 Protein Homology CDS 4391436 4393043 . - 0 ID=cds3951;Parent=gene4053;Dbxref=Genbank:WP_002209564.1;Name=WP_002209564.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002209564.1;transl_table=11 NC_017265.1 RefSeq gene 4393446 4393652 . - . ID=gene4054;Name=YPC_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20310;old_locus_tag=YPC_4514 NC_017265.1 Protein Homology CDS 4393446 4393652 . - 0 ID=cds3952;Parent=gene4054;Dbxref=Genbank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11 NC_017265.1 RefSeq gene 4393712 4395382 . - . ID=gene4055;Name=YPC_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20315;old_locus_tag=YPC_4515 NC_017265.1 Protein Homology CDS 4393712 4395382 . - 0 ID=cds3953;Parent=gene4055;Dbxref=Genbank:WP_002209565.1;Name=WP_002209565.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002209565.1;transl_table=11 NC_017265.1 RefSeq gene 4395584 4396975 . - . ID=gene4056;Name=YPC_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20320;old_locus_tag=YPC_4516 NC_017265.1 Protein Homology CDS 4395584 4396975 . - 0 ID=cds3954;Parent=gene4056;Dbxref=Genbank:WP_002224153.1;Name=WP_002224153.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002224153.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4397246 4397970 . + . ID=id363;gbkey=repeat_region NC_017265.1 RefSeq gene 4397359 4397817 . - . ID=gene4057;Name=YPC_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20325;old_locus_tag=YPC_4517 NC_017265.1 Protein Homology CDS 4397359 4397817 . - 0 ID=cds3955;Parent=gene4057;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_017265.1 RefSeq gene 4397998 4398074 . - . ID=gene4058;Name=YPC_RS20335;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPC_RS20335;old_locus_tag=YPC_4518 NC_017265.1 tRNAscan-SE tRNA 4397998 4398074 . - . ID=rna96;Parent=gene4058;anticodon=(pos:complement(4398038..4398040));gbkey=tRNA;product=tRNA-Pro NC_017265.1 tRNAscan-SE exon 4397998 4398074 . - . ID=id364;Parent=rna96;anticodon=(pos:complement(4398038..4398040));gbkey=tRNA;product=tRNA-Pro NC_017265.1 RefSeq gene 4398191 4399522 . - . ID=gene4059;Name=YPC_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20340;old_locus_tag=YPC_4519 NC_017265.1 Protein Homology CDS 4398191 4399522 . - 0 ID=cds3956;Parent=gene4059;Dbxref=Genbank:WP_015683791.1;Name=WP_015683791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683791.1;transl_table=11 NC_017265.1 RefSeq gene 4399617 4400354 . - . ID=gene4060;Name=YPC_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20345 NC_017265.1 Protein Homology CDS 4399617 4400354 . - 0 ID=cds3957;Parent=gene4060;Dbxref=Genbank:WP_002228715.1;Name=WP_002228715.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002228715.1;transl_table=11 NC_017265.1 RefSeq gene 4400352 4401147 . - . ID=gene4061;Name=YPC_RS20350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS20350;partial=true;pseudo=true;start_range=.,4400352 NC_017265.1 Protein Homology CDS 4400352 4401147 . - 0 ID=cds3958;Parent=gene4061;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=histidine kinase;pseudo=true;start_range=.,4400352;transl_table=11 NC_017265.1 RefSeq gene 4401144 4401734 . - . ID=gene4062;Name=YPC_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20355;old_locus_tag=YPC_4522 NC_017265.1 Protein Homology CDS 4401144 4401734 . - 0 ID=cds3959;Parent=gene4062;Dbxref=Genbank:WP_002209570.1;Name=WP_002209570.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209570.1;transl_table=11 NC_017265.1 RefSeq gene 4401850 4403541 . - . ID=gene4063;Name=YPC_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20360;old_locus_tag=YPC_4523 NC_017265.1 Protein Homology CDS 4401850 4403541 . - 0 ID=cds3960;Parent=gene4063;Dbxref=Genbank:WP_002209571.1;Name=WP_002209571.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=WP_002209571.1;transl_table=11 NC_017265.1 RefSeq gene 4404070 4405533 . - . ID=gene4064;Name=YPC_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20365;old_locus_tag=YPC_4524 NC_017265.1 Protein Homology CDS 4404070 4405533 . - 0 ID=cds3961;Parent=gene4064;Dbxref=Genbank:WP_002209573.1;Name=WP_002209573.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209573.1;transl_table=11 NC_017265.1 RefSeq gene 4406001 4407404 . - . ID=gene4065;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPC_RS20370;old_locus_tag=YPC_4525 NC_017265.1 Protein Homology CDS 4406001 4407404 . - 0 ID=cds3962;Parent=gene4065;Dbxref=Genbank:WP_002214368.1;Name=WP_002214368.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002214368.1;transl_table=11 NC_017265.1 RefSeq gene 4407822 4409354 . - . ID=gene4066;Name=YPC_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20375;old_locus_tag=YPC_4526 NC_017265.1 Protein Homology CDS 4407822 4409354 . - 0 ID=cds3963;Parent=gene4066;Dbxref=Genbank:WP_002209575.1;Name=WP_002209575.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=WP_002209575.1;transl_table=11 NC_017265.1 RefSeq gene 4409351 4411042 . - . ID=gene4067;Name=YPC_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20380;old_locus_tag=YPC_4527 NC_017265.1 Protein Homology CDS 4409351 4411042 . - 0 ID=cds3964;Parent=gene4067;Dbxref=Genbank:WP_002209576.1;Name=WP_002209576.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11 NC_017265.1 RefSeq gene 4411769 4412713 . + . ID=gene4068;Name=YPC_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20385;old_locus_tag=YPC_4528 NC_017265.1 Protein Homology CDS 4411769 4412713 . + 0 ID=cds3965;Parent=gene4068;Dbxref=Genbank:WP_002209577.1;Name=WP_002209577.1;gbkey=CDS;product=pyridoxal-5'-phosphate-dependent protein;protein_id=WP_002209577.1;transl_table=11 NC_017265.1 RefSeq gene 4412710 4413276 . + . ID=gene4069;Name=YPC_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20390;old_locus_tag=YPC_4529 NC_017265.1 Protein Homology CDS 4412710 4413276 . + 0 ID=cds3966;Parent=gene4069;Dbxref=Genbank:WP_002209578.1;Name=WP_002209578.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002209578.1;transl_table=11 NC_017265.1 RefSeq gene 4413359 4414288 . + . ID=gene4070;Name=YPC_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20395;old_locus_tag=YPC_4530 NC_017265.1 Protein Homology CDS 4413359 4414288 . + 0 ID=cds3967;Parent=gene4070;Dbxref=Genbank:WP_002209579.1;Name=WP_002209579.1;gbkey=CDS;product=transporter;protein_id=WP_002209579.1;transl_table=11 NC_017265.1 RefSeq gene 4414290 4415534 . + . ID=gene4071;Name=YPC_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20400;old_locus_tag=YPC_4531 NC_017265.1 Protein Homology CDS 4414290 4415534 . + 0 ID=cds3968;Parent=gene4071;Dbxref=Genbank:WP_002209580.1;Name=WP_002209580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209580.1;transl_table=11 NC_017265.1 RefSeq gene 4416057 4417010 . + . ID=gene4072;Name=YPC_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20405;old_locus_tag=YPC_4532 NC_017265.1 Protein Homology CDS 4416057 4417010 . + 0 ID=cds3969;Parent=gene4072;Dbxref=Genbank:WP_002209581.1;Name=WP_002209581.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NC_017265.1 RefSeq gene 4417020 4417979 . + . ID=gene4073;Name=YPC_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20410 NC_017265.1 Protein Homology CDS 4417020 4417979 . + 0 ID=cds3970;Parent=gene4073;Dbxref=Genbank:WP_002209582.1;Name=WP_002209582.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002209582.1;transl_table=11 NC_017265.1 RefSeq gene 4417969 4418976 . + . ID=gene4074;Name=YPC_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20415 NC_017265.1 Protein Homology CDS 4417969 4418976 . + 0 ID=cds3971;Parent=gene4074;Dbxref=Genbank:WP_002209583.1;Name=WP_002209583.1;gbkey=CDS;product=enterobactin ABC transporter permease;protein_id=WP_002209583.1;transl_table=11 NC_017265.1 RefSeq gene 4418973 4419731 . + . ID=gene4075;Name=YPC_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20420;old_locus_tag=YPC_4535 NC_017265.1 Protein Homology CDS 4418973 4419731 . + 0 ID=cds3972;Parent=gene4075;Dbxref=Genbank:WP_015683792.1;Name=WP_015683792.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_015683792.1;transl_table=11 NC_017265.1 RefSeq gene 4419728 4420228 . - . ID=gene4076;Name=YPC_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20425;old_locus_tag=YPC_4536 NC_017265.1 Protein Homology CDS 4419728 4420228 . - 0 ID=cds3973;Parent=gene4076;Dbxref=Genbank:WP_002214364.1;Name=WP_002214364.1;gbkey=CDS;product=toxin Fic;protein_id=WP_002214364.1;transl_table=11 NC_017265.1 RefSeq gene 4420464 4420649 . - . ID=gene4077;Name=YPC_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20430;old_locus_tag=YPC_4537 NC_017265.1 Protein Homology CDS 4420464 4420649 . - 0 ID=cds3974;Parent=gene4077;Dbxref=Genbank:WP_002214362.1;Name=WP_002214362.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214362.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4421036 4421291 . + . ID=id365;gbkey=repeat_region NC_017265.1 RefSeq gene 4421589 4421951 . + . ID=gene4078;Name=YPC_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20435;old_locus_tag=YPC_4539 NC_017265.1 Protein Homology CDS 4421589 4421951 . + 0 ID=cds3975;Parent=gene4078;Dbxref=Genbank:WP_002209585.1;Name=WP_002209585.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209585.1;transl_table=11 NC_017265.1 RefSeq gene 4422213 4422629 . + . ID=gene4079;Name=YPC_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20440;old_locus_tag=YPC_4540 NC_017265.1 Protein Homology CDS 4422213 4422629 . + 0 ID=cds3976;Parent=gene4079;Dbxref=Genbank:WP_002414078.1;Name=WP_002414078.1;gbkey=CDS;product=transposase;protein_id=WP_002414078.1;transl_table=11 NC_017265.1 RefSeq gene 4422629 4422922 . + . ID=gene4080;Name=YPC_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20445;old_locus_tag=YPC_4541 NC_017265.1 Protein Homology CDS 4422629 4422922 . + 0 ID=cds3977;Parent=gene4080;Dbxref=Genbank:WP_002361323.1;Name=WP_002361323.1;gbkey=CDS;product=transposase;protein_id=WP_002361323.1;transl_table=11 NC_017265.1 RefSeq gene 4423096 4423341 . + . ID=gene4081;Name=YPC_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20450;old_locus_tag=YPC_4543 NC_017265.1 Protein Homology CDS 4423096 4423341 . + 0 ID=cds3978;Parent=gene4081;Dbxref=Genbank:WP_002214358.1;Name=WP_002214358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214358.1;transl_table=11 NC_017265.1 RefSeq gene 4423609 4424988 . - . ID=gene4082;Name=YPC_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20455;old_locus_tag=YPC_4544 NC_017265.1 Protein Homology CDS 4423609 4424988 . - 0 ID=cds3979;Parent=gene4082;Dbxref=Genbank:WP_002209586.1;Name=WP_002209586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209586.1;transl_table=11 NC_017265.1 RefSeq gene 4424975 4426168 . - . ID=gene4083;Name=YPC_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20460;old_locus_tag=YPC_4545 NC_017265.1 Protein Homology CDS 4424975 4426168 . - 0 ID=cds3980;Parent=gene4083;Dbxref=Genbank:WP_015683793.1;Name=WP_015683793.1;gbkey=CDS;product=integrase;protein_id=WP_015683793.1;transl_table=11 NC_017265.1 RefSeq gene 4426554 4427747 . - . ID=gene4084;Name=YPC_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20465;old_locus_tag=YPC_4547 NC_017265.1 Protein Homology CDS 4426554 4427747 . - 0 ID=cds3981;Parent=gene4084;Dbxref=Genbank:WP_002209588.1;Name=WP_002209588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209588.1;transl_table=11 NC_017265.1 RefSeq gene 4427837 4429021 . - . ID=gene4085;Name=YPC_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20470;old_locus_tag=YPC_4548 NC_017265.1 Protein Homology CDS 4427837 4429021 . - 0 ID=cds3982;Parent=gene4085;Dbxref=Genbank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;product=xylose ABC transporter permease;protein_id=WP_002209589.1;transl_table=11 NC_017265.1 RefSeq gene 4429008 4430540 . - . ID=gene4086;Name=YPC_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20475;old_locus_tag=YPC_4549 NC_017265.1 Protein Homology CDS 4429008 4430540 . - 0 ID=cds3983;Parent=gene4086;Dbxref=Genbank:WP_002209590.1;Name=WP_002209590.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=WP_002209590.1;transl_table=11 NC_017265.1 RefSeq gene 4430748 4431743 . - . ID=gene4087;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=YPC_RS20480;old_locus_tag=YPC_4550 NC_017265.1 Protein Homology CDS 4430748 4431743 . - 0 ID=cds3984;Parent=gene4087;Dbxref=Genbank:WP_002209591.1;Name=WP_002209591.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;product=xylose ABC transporter substrate-binding protein;protein_id=WP_002209591.1;transl_table=11 NC_017265.1 RefSeq gene 4432206 4433525 . + . ID=gene4088;Name=YPC_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20485;old_locus_tag=YPC_4551 NC_017265.1 Protein Homology CDS 4432206 4433525 . + 0 ID=cds3985;Parent=gene4088;Dbxref=Genbank:WP_002209593.1;Name=WP_002209593.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NC_017265.1 RefSeq gene 4433649 4435103 . + . ID=gene4089;Name=YPC_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20490;old_locus_tag=YPC_4552 NC_017265.1 Protein Homology CDS 4433649 4435103 . + 0 ID=cds3986;Parent=gene4089;Dbxref=Genbank:WP_002209594.1;Name=WP_002209594.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulokinase;protein_id=WP_002209594.1;transl_table=11 NC_017265.1 RefSeq gene 4435202 4436188 . - . ID=gene4090;Name=YPC_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20495;old_locus_tag=YPC_4553 NC_017265.1 Protein Homology CDS 4435202 4436188 . - 0 ID=cds3987;Parent=gene4090;Dbxref=Genbank:WP_002209595.1;Name=WP_002209595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209595.1;transl_table=11 NC_017265.1 RefSeq gene 4436227 4436994 . - . ID=gene4091;Name=YPC_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20500;old_locus_tag=YPC_4554 NC_017265.1 Protein Homology CDS 4436227 4436994 . - 0 ID=cds3988;Parent=gene4091;Dbxref=Genbank:WP_002209596.1;Name=WP_002209596.1;gbkey=CDS;product=fimbrial chaperone protein StdC;protein_id=WP_002209596.1;transl_table=11 NC_017265.1 RefSeq gene 4437087 4439577 . - . ID=gene4092;Name=YPC_RS20510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS20510;old_locus_tag=YPC_4557;pseudo=true NC_017265.1 Protein Homology CDS 4437087 4439577 . - 0 ID=cds3989;Parent=gene4092;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fimbrial protein;pseudo=true;transl_except=(pos:complement(4437735..4437737)%2Caa:Other);transl_table=11 NC_017265.1 RefSeq gene 4439653 4440210 . - . ID=gene4093;Name=YPC_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20515;old_locus_tag=YPC_4558 NC_017265.1 Protein Homology CDS 4439653 4440210 . - 0 ID=cds3990;Parent=gene4093;Dbxref=Genbank:WP_002209597.1;Name=WP_002209597.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209597.1;transl_table=11 NC_017265.1 RefSeq gene 4441092 4442084 . - . ID=gene4094;Name=YPC_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20520;old_locus_tag=YPC_4560 NC_017265.1 Protein Homology CDS 4441092 4442084 . - 0 ID=cds3991;Parent=gene4094;Dbxref=Genbank:WP_002209600.1;Name=WP_002209600.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=O-acetyltransferase;protein_id=WP_002209600.1;transl_table=11 NC_017265.1 RefSeq gene 4442081 4442281 . - . ID=gene4095;Name=YPC_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20525;old_locus_tag=YPC_4561 NC_017265.1 Protein Homology CDS 4442081 4442281 . - 0 ID=cds3992;Parent=gene4095;Dbxref=Genbank:WP_002209601.1;Name=WP_002209601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209601.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4442316 4444048 . + . ID=id366;gbkey=repeat_region NC_017265.1 RefSeq gene 4442447 4442962 . + . ID=gene4096;Name=YPC_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20530 NC_017265.1 Protein Homology CDS 4442447 4442962 . + 0 ID=cds3993;Parent=gene4096;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_017265.1 RefSeq gene 4443016 4443801 . + . ID=gene4097;Name=YPC_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20535;old_locus_tag=YPC_4563 NC_017265.1 Protein Homology CDS 4443016 4443801 . + 0 ID=cds3994;Parent=gene4097;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_017265.1 RefSeq gene 4444274 4445503 . + . ID=gene4098;Name=YPC_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20540;old_locus_tag=YPC_4564 NC_017265.1 Protein Homology CDS 4444274 4445503 . + 0 ID=cds3995;Parent=gene4098;Dbxref=Genbank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_002215753.1;transl_table=11 NC_017265.1 RefSeq gene 4445652 4445855 . - . ID=gene4099;Name=YPC_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20545 NC_017265.1 Protein Homology CDS 4445652 4445855 . - 0 ID=cds3996;Parent=gene4099;Dbxref=Genbank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11 NC_017265.1 RefSeq gene 4445976 4446134 . + . ID=gene4100;Name=YPC_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20550;old_locus_tag=YPC_4565 NC_017265.1 Protein Homology CDS 4445976 4446134 . + 0 ID=cds3997;Parent=gene4100;Dbxref=Genbank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NC_017265.1 RefSeq gene 4446213 4446794 . + . ID=gene4101;Name=YPC_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20555;old_locus_tag=YPC_4566 NC_017265.1 Protein Homology CDS 4446213 4446794 . + 0 ID=cds3998;Parent=gene4101;Dbxref=Genbank:WP_002215751.1;Name=WP_002215751.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215751.1;transl_table=11 NC_017265.1 RefSeq gene 4446808 4447140 . - . ID=gene4102;Name=YPC_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20560;old_locus_tag=YPC_4567 NC_017265.1 Protein Homology CDS 4446808 4447140 . - 0 ID=cds3999;Parent=gene4102;Dbxref=Genbank:WP_002215750.1;Name=WP_002215750.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215750.1;transl_table=11 NC_017265.1 RefSeq gene 4447429 4447893 . + . ID=gene4103;Name=YPC_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20565;old_locus_tag=YPC_4568 NC_017265.1 Protein Homology CDS 4447429 4447893 . + 0 ID=cds4000;Parent=gene4103;Dbxref=Genbank:WP_002209607.1;Name=WP_002209607.1;gbkey=CDS;product=transposase;protein_id=WP_002209607.1;transl_table=11 NC_017265.1 RefSeq gene 4447900 4449615 . - . ID=gene4104;Name=YPC_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20570 NC_017265.1 Protein Homology CDS 4447900 4449615 . - 0 ID=cds4001;Parent=gene4104;Dbxref=Genbank:WP_002355624.1;Name=WP_002355624.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_002355624.1;transl_table=11 NC_017265.1 RefSeq gene 4449588 4449851 . - . ID=gene4105;Name=YPC_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20575 NC_017265.1 GeneMarkS+ CDS 4449588 4449851 . - 0 ID=cds4002;Parent=gene4105;Dbxref=Genbank:WP_031334614.1;Name=WP_031334614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_031334614.1;transl_table=11 NC_017265.1 RefSeq gene 4449848 4451236 . - . ID=gene4106;Name=YPC_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20580;old_locus_tag=YPC_4571 NC_017265.1 Protein Homology CDS 4449848 4451236 . - 0 ID=cds4003;Parent=gene4106;Dbxref=Genbank:WP_002209608.1;Name=WP_002209608.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_002209608.1;transl_table=11 NC_017265.1 RefSeq gene 4451420 4452349 . - . ID=gene4107;Name=YPC_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20585;old_locus_tag=YPC_4572 NC_017265.1 Protein Homology CDS 4451420 4452349 . - 0 ID=cds4004;Parent=gene4107;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11 NC_017265.1 RefSeq gene 4452349 4453023 . - . ID=gene4108;Name=YPC_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20590;old_locus_tag=YPC_4573 NC_017265.1 Protein Homology CDS 4452349 4453023 . - 0 ID=cds4005;Parent=gene4108;Dbxref=Genbank:WP_002209610.1;Name=WP_002209610.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_002209610.1;transl_table=11 NC_017265.1 RefSeq gene 4453020 4453991 . - . ID=gene4109;Name=YPC_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20595;old_locus_tag=YPC_4574 NC_017265.1 Protein Homology CDS 4453020 4453991 . - 0 ID=cds4006;Parent=gene4109;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11 NC_017265.1 RefSeq gene 4454004 4456415 . - . ID=gene4110;Name=YPC_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20600 NC_017265.1 Protein Homology CDS 4454004 4456415 . - 0 ID=cds4007;Parent=gene4110;Dbxref=Genbank:WP_002231683.1;Name=WP_002231683.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_002231683.1;transl_table=11 NC_017265.1 RefSeq gene 4456464 4457051 . - . ID=gene4111;Name=YPC_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20605 NC_017265.1 Protein Homology CDS 4456464 4457051 . - 0 ID=cds4008;Parent=gene4111;Dbxref=Genbank:WP_002231685.1;Name=WP_002231685.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002231685.1;transl_table=11 NC_017265.1 RefSeq gene 4457248 4458072 . + . ID=gene4112;Name=YPC_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20610;old_locus_tag=YPC_4577 NC_017265.1 Protein Homology CDS 4457248 4458072 . + 0 ID=cds4009;Parent=gene4112;Dbxref=Genbank:WP_002209612.1;Name=WP_002209612.1;gbkey=CDS;product=protein FdhD;protein_id=WP_002209612.1;transl_table=11 NC_017265.1 RefSeq gene 4458508 4459131 . + . ID=gene4113;Name=YPC_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20615;old_locus_tag=YPC_4579 NC_017265.1 Protein Homology CDS 4458508 4459131 . + 0 ID=cds4010;Parent=gene4113;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11 NC_017265.1 RefSeq gene 4459475 4461424 . + . ID=gene4114;Name=YPC_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20620;old_locus_tag=YPC_4580 NC_017265.1 Protein Homology CDS 4459475 4461424 . + 0 ID=cds4011;Parent=gene4114;Dbxref=Genbank:WP_002209615.1;Name=WP_002209615.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209615.1;transl_table=11 NC_017265.1 RefSeq gene 4461614 4461946 . + . ID=gene4115;Name=YPC_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20625;old_locus_tag=YPC_4582 NC_017265.1 Protein Homology CDS 4461614 4461946 . + 0 ID=cds4012;Parent=gene4115;Dbxref=Genbank:WP_002217114.1;Name=WP_002217114.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217114.1;transl_table=11 NC_017265.1 RefSeq gene 4462478 4462954 . + . ID=gene4116;Name=YPC_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20630;old_locus_tag=YPC_4583 NC_017265.1 Protein Homology CDS 4462478 4462954 . + 0 ID=cds4013;Parent=gene4116;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11 NC_017265.1 RefSeq gene 4463123 4463479 . - . ID=gene4117;Name=YPC_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20635;old_locus_tag=YPC_4584 NC_017265.1 Protein Homology CDS 4463123 4463479 . - 0 ID=cds4014;Parent=gene4117;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11 NC_017265.1 RefSeq gene 4463728 4464282 . - . ID=gene4118;Name=YPC_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20640;old_locus_tag=YPC_4586 NC_017265.1 Protein Homology CDS 4463728 4464282 . - 0 ID=cds4015;Parent=gene4118;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11 NC_017265.1 RefSeq gene 4464489 4465652 . - . ID=gene4119;Name=YPC_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20645;old_locus_tag=YPC_4587 NC_017265.1 Protein Homology CDS 4464489 4465652 . - 0 ID=cds4016;Parent=gene4119;Dbxref=Genbank:WP_002209620.1;Name=WP_002209620.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_002209620.1;transl_table=11 NC_017265.1 RefSeq gene 4465789 4467720 . - . ID=gene4120;Name=YPC_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20650;old_locus_tag=YPC_4588 NC_017265.1 Protein Homology CDS 4465789 4467720 . - 0 ID=cds4017;Parent=gene4120;Dbxref=Genbank:WP_002209621.1;Name=WP_002209621.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannitol transporter subunit IIABC;protein_id=WP_002209621.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4468162 4468336 . + . ID=id367;gbkey=repeat_region NC_017265.1 RefSeq gene 4468370 4469089 . - . ID=gene4121;Name=YPC_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20655;old_locus_tag=YPC_4590 NC_017265.1 Protein Homology CDS 4468370 4469089 . - 0 ID=cds4018;Parent=gene4121;Dbxref=Genbank:WP_002209622.1;Name=WP_002209622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209622.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4469341 4469515 . + . ID=id368;gbkey=repeat_region NC_017265.1 RefSeq gene 4469562 4471631 . - . ID=gene4122;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YPC_RS20660;old_locus_tag=YPC_4592 NC_017265.1 Protein Homology CDS 4469562 4471631 . - 0 ID=cds4019;Parent=gene4122;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NC_017265.1 RefSeq gene 4471641 4472555 . - . ID=gene4123;Name=YPC_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20665;old_locus_tag=YPC_4593 NC_017265.1 Protein Homology CDS 4471641 4472555 . - 0 ID=cds4020;Parent=gene4123;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NC_017265.1 RefSeq gene 4472883 4473455 . + . ID=gene4124;Name=YPC_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20670;old_locus_tag=YPC_4594 NC_017265.1 Protein Homology CDS 4472883 4473455 . + 0 ID=cds4021;Parent=gene4124;Dbxref=Genbank:WP_002223790.1;Name=WP_002223790.1;gbkey=CDS;product=3-methyladenine DNA glycosylase;protein_id=WP_002223790.1;transl_table=11 NC_017265.1 RefSeq gene 4473452 4473907 . + . ID=gene4125;Name=YPC_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20675;old_locus_tag=YPC_4595 NC_017265.1 Protein Homology CDS 4473452 4473907 . + 0 ID=cds4022;Parent=gene4125;Dbxref=Genbank:WP_002209627.1;Name=WP_002209627.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209627.1;transl_table=11 NC_017265.1 RefSeq gene 4474265 4474924 . + . ID=gene4126;Name=YPC_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20680;old_locus_tag=YPC_4597 NC_017265.1 Protein Homology CDS 4474265 4474924 . + 0 ID=cds4023;Parent=gene4126;Dbxref=Genbank:WP_002209628.1;Name=WP_002209628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209628.1;transl_table=11 NC_017265.1 RefSeq gene 4475055 4475699 . - . ID=gene4127;Name=YPC_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20685;old_locus_tag=YPC_4598 NC_017265.1 Protein Homology CDS 4475055 4475699 . - 0 ID=cds4024;Parent=gene4127;Dbxref=Genbank:WP_002209629.1;Name=WP_002209629.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209629.1;transl_table=11 NC_017265.1 RefSeq gene 4476218 4477198 . + . ID=gene4128;Name=YPC_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20690;old_locus_tag=YPC_4599 NC_017265.1 Protein Homology CDS 4476218 4477198 . + 0 ID=cds4025;Parent=gene4128;Dbxref=Genbank:WP_002223788.1;Name=WP_002223788.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_002223788.1;transl_table=11 NC_017265.1 RefSeq gene 4477487 4479550 . + . ID=gene4129;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YPC_RS20695;old_locus_tag=YPC_4600 NC_017265.1 Protein Homology CDS 4477487 4479550 . + 0 ID=cds4026;Parent=gene4129;Dbxref=Genbank:WP_002209631.1;Name=WP_002209631.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_002209631.1;transl_table=11 NC_017265.1 RefSeq gene 4479965 4480408 . + . ID=gene4130;Name=YPC_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20700;old_locus_tag=YPC_4601 NC_017265.1 Protein Homology CDS 4479965 4480408 . + 0 ID=cds4027;Parent=gene4130;Dbxref=Genbank:WP_002209632.1;Name=WP_002209632.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209632.1;transl_table=11 NC_017265.1 RefSeq gene 4480863 4482128 . + . ID=gene4131;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YPC_RS20705;old_locus_tag=YPC_4602 NC_017265.1 Protein Homology CDS 4480863 4482128 . + 0 ID=cds4028;Parent=gene4131;Dbxref=Genbank:WP_002228155.1;Name=WP_002228155.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_002228155.1;transl_table=11 NC_017265.1 RefSeq gene 4482241 4483899 . - . ID=gene4132;Name=YPC_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20710;old_locus_tag=YPC_4603 NC_017265.1 Protein Homology CDS 4482241 4483899 . - 0 ID=cds4029;Parent=gene4132;Dbxref=Genbank:WP_002209634.1;Name=WP_002209634.1;gbkey=CDS;product=transporter;protein_id=WP_002209634.1;transl_table=11 NC_017265.1 RefSeq gene 4484272 4484736 . - . ID=gene4133;Name=YPC_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20715;old_locus_tag=YPC_4605 NC_017265.1 Protein Homology CDS 4484272 4484736 . - 0 ID=cds4030;Parent=gene4133;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11 NC_017265.1 RefSeq gene 4485017 4485430 . - . ID=gene4134;Name=YPC_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20720;old_locus_tag=YPC_4606 NC_017265.1 Protein Homology CDS 4485017 4485430 . - 0 ID=cds4031;Parent=gene4134;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11 NC_017265.1 RefSeq gene 4485798 4486136 . + . ID=gene4135;Name=YPC_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20725;old_locus_tag=YPC_4607 NC_017265.1 Protein Homology CDS 4485798 4486136 . + 0 ID=cds4032;Parent=gene4135;Dbxref=Genbank:WP_002209637.1;Name=WP_002209637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209637.1;transl_table=11 NC_017265.1 RefSeq gene 4486176 4486490 . - . ID=gene4136;Name=YPC_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20730;old_locus_tag=YPC_4608 NC_017265.1 Protein Homology CDS 4486176 4486490 . - 0 ID=cds4033;Parent=gene4136;Dbxref=Genbank:WP_002228733.1;Name=WP_002228733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228733.1;transl_table=11 NC_017265.1 RefSeq gene 4486480 4486791 . - . ID=gene4137;Name=YPC_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20735;old_locus_tag=YPC_4609 NC_017265.1 Protein Homology CDS 4486480 4486791 . - 0 ID=cds4034;Parent=gene4137;Dbxref=Genbank:WP_002228734.1;Name=WP_002228734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228734.1;transl_table=11 NC_017265.1 RefSeq gene 4486999 4487961 . + . ID=gene4138;Name=YPC_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20740;old_locus_tag=YPC_4610 NC_017265.1 Protein Homology CDS 4486999 4487961 . + 0 ID=cds4035;Parent=gene4138;Dbxref=Genbank:WP_002209638.1;Name=WP_002209638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209638.1;transl_table=11 NC_017265.1 RefSeq gene 4487955 4488908 . + . ID=gene4139;Name=YPC_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20745;old_locus_tag=YPC_4611 NC_017265.1 Protein Homology CDS 4487955 4488908 . + 0 ID=cds4036;Parent=gene4139;Dbxref=Genbank:WP_002209639.1;Name=WP_002209639.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_002209639.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4488947 4490743 . + . ID=id369;gbkey=repeat_region NC_017265.1 RefSeq region 4489060 4490500 . + . ID=id370;Dbxref=ASAP:BBE-0004988,ERIC:BBE-0004988;Note=IS1661.8;gbkey=mobile_element NC_017265.1 RefSeq gene 4489115 4489630 . + . ID=gene4140;Name=YPC_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20750 NC_017265.1 Protein Homology CDS 4489115 4489630 . + 0 ID=cds4037;Parent=gene4140;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_017265.1 RefSeq gene 4489684 4490469 . + . ID=gene4141;Name=YPC_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20755;old_locus_tag=YPC_4613 NC_017265.1 Protein Homology CDS 4489684 4490469 . + 0 ID=cds4038;Parent=gene4141;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_017265.1 RefSeq gene 4490860 4491669 . - . ID=gene4142;Name=YPC_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20760;old_locus_tag=YPC_4614 NC_017265.1 Protein Homology CDS 4490860 4491669 . - 0 ID=cds4039;Parent=gene4142;Dbxref=Genbank:WP_002209641.1;Name=WP_002209641.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_002209641.1;transl_table=11 NC_017265.1 RefSeq gene 4491885 4494299 . - . ID=gene4143;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YPC_RS20765;old_locus_tag=YPC_4615 NC_017265.1 Protein Homology CDS 4491885 4494299 . - 0 ID=cds4040;Parent=gene4143;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11 NC_017265.1 RefSeq gene 4494319 4495404 . - . ID=gene4144;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YPC_RS20770;old_locus_tag=YPC_4616 NC_017265.1 Protein Homology CDS 4494319 4495404 . - 0 ID=cds4041;Parent=gene4144;Dbxref=Genbank:WP_002209643.1;Name=WP_002209643.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_002209643.1;transl_table=11 NC_017265.1 RefSeq gene 4495403 4495573 . + . ID=gene4145;Name=YPC_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20775 NC_017265.1 Protein Homology CDS 4495403 4495573 . + 0 ID=cds4042;Parent=gene4145;Dbxref=Genbank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;product=recombinase F;protein_id=WP_002218418.1;transl_table=11 NC_017265.1 RefSeq gene 4495577 4496677 . - . ID=gene4146;Name=YPC_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20780;old_locus_tag=YPC_4617 NC_017265.1 Protein Homology CDS 4495577 4496677 . - 0 ID=cds4043;Parent=gene4146;Dbxref=Genbank:WP_002209645.1;Name=WP_002209645.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11 NC_017265.1 RefSeq gene 4496682 4498070 . - . ID=gene4147;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YPC_RS20785;old_locus_tag=YPC_4618 NC_017265.1 Protein Homology CDS 4496682 4498070 . - 0 ID=cds4044;Parent=gene4147;Dbxref=Genbank:WP_002220732.1;Name=WP_002220732.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 NC_017265.1 RefSeq gene 4498780 4498920 . + . ID=gene4148;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YPC_RS20790;old_locus_tag=YPC_4620 NC_017265.1 Protein Homology CDS 4498780 4498920 . + 0 ID=cds4045;Parent=gene4148;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 NC_017265.1 RefSeq gene 4498939 4499298 . + . ID=gene4149;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YPC_RS20795;old_locus_tag=YPC_4621 NC_017265.1 Protein Homology CDS 4498939 4499298 . + 0 ID=cds4046;Parent=gene4149;Dbxref=Genbank:WP_002228153.1;Name=WP_002228153.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NC_017265.1 RefSeq gene 4499522 4501162 . + . ID=gene4150;Name=YPC_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20800;old_locus_tag=YPC_4623 NC_017265.1 Protein Homology CDS 4499522 4501162 . + 0 ID=cds4047;Parent=gene4150;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11 NC_017265.1 RefSeq gene 4501305 4502669 . + . ID=gene4151;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=YPC_RS20805;old_locus_tag=YPC_4624 NC_017265.1 Protein Homology CDS 4501305 4502669 . + 0 ID=cds4048;Parent=gene4151;Dbxref=Genbank:WP_002220740.1;Name=WP_002220740.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_002220740.1;transl_table=11 NC_017265.1 RefSeq gene 4502855 4504054 . + . ID=gene4152;Name=YPC_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20810;old_locus_tag=YPC_4625 NC_017265.1 Protein Homology CDS 4502855 4504054 . + 0 ID=cds4049;Parent=gene4152;Dbxref=Genbank:WP_002215588.1;Name=WP_002215588.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_002215588.1;transl_table=11 NC_017265.1 RefSeq gene 4504516 4504797 . - . ID=gene4153;Name=YPC_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20815;old_locus_tag=YPC_4627 NC_017265.1 Protein Homology CDS 4504516 4504797 . - 0 ID=cds4050;Parent=gene4153;Dbxref=Genbank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215583.1;transl_table=11 NC_017265.1 RefSeq gene 4504859 4505479 . - . ID=gene4154;Name=YPC_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20820;old_locus_tag=YPC_4628 NC_017265.1 Protein Homology CDS 4504859 4505479 . - 0 ID=cds4051;Parent=gene4154;Dbxref=Genbank:WP_002215581.1;Name=WP_002215581.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215581.1;transl_table=11 NC_017265.1 RefSeq gene 4506024 4507352 . - . ID=gene4155;Name=YPC_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20825;old_locus_tag=YPC_4629 NC_017265.1 Protein Homology CDS 4506024 4507352 . - 0 ID=cds4052;Parent=gene4155;Dbxref=Genbank:WP_002215577.1;Name=WP_002215577.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_002215577.1;transl_table=11 NC_017265.1 RefSeq repeat_region 4507571 4507743 . + . ID=id371;gbkey=repeat_region NC_017265.1 RefSeq gene 4507845 4508513 . + . ID=gene4156;Name=YPC_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20830;old_locus_tag=YPC_4631 NC_017265.1 Protein Homology CDS 4507845 4508513 . + 0 ID=cds4053;Parent=gene4156;Dbxref=Genbank:WP_002215575.1;Name=WP_002215575.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_002215575.1;transl_table=11 NC_017265.1 RefSeq gene 4508548 4509303 . - . ID=gene4157;Name=YPC_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20835;old_locus_tag=YPC_4632 NC_017265.1 Protein Homology CDS 4508548 4509303 . - 0 ID=cds4054;Parent=gene4157;Dbxref=Genbank:WP_002215573.1;Name=WP_002215573.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215573.1;transl_table=11 NC_017265.1 RefSeq gene 4509305 4510042 . - . ID=gene4158;Name=YPC_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20840;old_locus_tag=YPC_4633 NC_017265.1 Protein Homology CDS 4509305 4510042 . - 0 ID=cds4055;Parent=gene4158;Dbxref=Genbank:WP_002215571.1;Name=WP_002215571.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215571.1;transl_table=11 NC_017265.1 RefSeq gene 4510225 4511079 . - . ID=gene4159;Name=YPC_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20845;old_locus_tag=YPC_4634 NC_017265.1 Protein Homology CDS 4510225 4511079 . - 0 ID=cds4056;Parent=gene4159;Dbxref=Genbank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11 NC_017265.1 RefSeq gene 4511299 4511970 . - . ID=gene4160;Name=YPC_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20850;old_locus_tag=YPC_4635 NC_017265.1 Protein Homology CDS 4511299 4511970 . - 0 ID=cds4057;Parent=gene4160;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11 NC_017265.1 RefSeq gene 4512266 4512988 . - . ID=gene4161;Name=YPC_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20855;old_locus_tag=YPC_4636 NC_017265.1 Protein Homology CDS 4512266 4512988 . - 0 ID=cds4058;Parent=gene4161;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11 NC_017265.1 RefSeq gene 4513076 4513852 . - . ID=gene4162;Name=YPC_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20860;old_locus_tag=YPC_4637 NC_017265.1 Protein Homology CDS 4513076 4513852 . - 0 ID=cds4059;Parent=gene4162;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11 NC_017265.1 RefSeq gene 4513933 4514820 . - . ID=gene4163;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPC_RS20865;old_locus_tag=YPC_4638 NC_017265.1 Protein Homology CDS 4513933 4514820 . - 0 ID=cds4060;Parent=gene4163;Dbxref=Genbank:WP_002215560.1;Name=WP_002215560.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_002215560.1;transl_table=11 NC_017265.1 RefSeq gene 4514822 4515778 . - . ID=gene4164;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YPC_RS20870;old_locus_tag=YPC_4639 NC_017265.1 Protein Homology CDS 4514822 4515778 . - 0 ID=cds4061;Parent=gene4164;Dbxref=Genbank:WP_002215558.1;Name=WP_002215558.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002215558.1;transl_table=11 NC_017265.1 RefSeq gene 4516007 4517047 . - . ID=gene4165;Name=YPC_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20875;old_locus_tag=YPC_4640 NC_017265.1 Protein Homology CDS 4516007 4517047 . - 0 ID=cds4062;Parent=gene4165;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11 NC_017265.1 RefSeq gene 4517530 4519359 . - . ID=gene4166;Name=YPC_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20880;old_locus_tag=YPC_4642 NC_017265.1 Protein Homology CDS 4517530 4519359 . - 0 ID=cds4063;Parent=gene4166;Dbxref=Genbank:WP_002215552.1;Name=WP_002215552.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_002215552.1;transl_table=11 NC_017265.1 RefSeq gene 4519560 4520930 . - . ID=gene4167;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YPC_RS20885;old_locus_tag=YPC_4643 NC_017265.1 Protein Homology CDS 4519560 4520930 . - 0 ID=cds4064;Parent=gene4167;Dbxref=Genbank:WP_002215550.1;Name=WP_002215550.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_002215550.1;transl_table=11 NC_017265.1 RefSeq gene 4521551 4521973 . - . ID=gene4168;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=YPC_RS20890;old_locus_tag=YPC_4645 NC_017265.1 Protein Homology CDS 4521551 4521973 . - 0 ID=cds4065;Parent=gene4168;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11 NC_017265.1 RefSeq gene 4521995 4523377 . - . ID=gene4169;Name=YPC_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20895;old_locus_tag=YPC_4646 NC_017265.1 Protein Homology CDS 4521995 4523377 . - 0 ID=cds4066;Parent=gene4169;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NC_017265.1 RefSeq gene 4523533 4524396 . - . ID=gene4170;Name=YPC_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20900;old_locus_tag=YPC_4648 NC_017265.1 Protein Homology CDS 4523533 4524396 . - 0 ID=cds4067;Parent=gene4170;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NC_017265.1 RefSeq gene 4524458 4525999 . - . ID=gene4171;Name=YPC_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20905;old_locus_tag=YPC_4649 NC_017265.1 Protein Homology CDS 4524458 4525999 . - 0 ID=cds4068;Parent=gene4171;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NC_017265.1 RefSeq gene 4526014 4526547 . - . ID=gene4172;Name=YPC_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20910;old_locus_tag=YPC_4650 NC_017265.1 Protein Homology CDS 4526014 4526547 . - 0 ID=cds4069;Parent=gene4172;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NC_017265.1 RefSeq gene 4526562 4527032 . - . ID=gene4173;Name=YPC_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20915;old_locus_tag=YPC_4651 NC_017265.1 Protein Homology CDS 4526562 4527032 . - 0 ID=cds4070;Parent=gene4173;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11 NC_017265.1 RefSeq gene 4527094 4527333 . - . ID=gene4174;Name=YPC_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20920;old_locus_tag=YPC_4652 NC_017265.1 Protein Homology CDS 4527094 4527333 . - 0 ID=cds4071;Parent=gene4174;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NC_017265.1 RefSeq gene 4527383 4528207 . - . ID=gene4175;Name=YPC_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20925;old_locus_tag=YPC_4653 NC_017265.1 Protein Homology CDS 4527383 4528207 . - 0 ID=cds4072;Parent=gene4175;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11 NC_017265.1 RefSeq gene 4528247 4528630 . - . ID=gene4176;Name=YPC_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20930;old_locus_tag=YPC_4654 NC_017265.1 Protein Homology CDS 4528247 4528630 . - 0 ID=cds4073;Parent=gene4176;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NC_017265.1 RefSeq gene 4529297 4529917 . - . ID=gene4177;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YPC_RS20935;old_locus_tag=YPC_4655 NC_017265.1 Protein Homology CDS 4529297 4529917 . - 0 ID=cds4074;Parent=gene4177;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11 NC_017265.1 RefSeq gene 4530063 4531952 . - . ID=gene4178;Name=YPC_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20940;old_locus_tag=YPC_4657 NC_017265.1 Protein Homology CDS 4530063 4531952 . - 0 ID=cds4075;Parent=gene4178;Dbxref=Genbank:WP_002212259.1;Name=WP_002212259.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 ##sequence-region NC_017263.1 1 68552 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=547048 NC_017263.1 RefSeq region 1 68552 . + . ID=id372;Dbxref=taxon:547048;Is_circular=true;Name=pCD;biovar=Medievalis;country=China;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=pCD;strain=Harbin 35;sub-species=pestis NC_017263.1 RefSeq gene 67629 68801 . - . ID=gene4179;Name=YPC_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22090;old_locus_tag=YPC_4659 NC_017263.1 Protein Homology CDS 67629 68801 . - 0 ID=cds4076;Dbxref=Genbank:WP_002220893.1;Name=WP_002220893.1;gbkey=CDS;gene=copA;product=integrase;protein_id=WP_002220893.1;transl_table=11 NC_017263.1 RefSeq gene 499 996 . + . ID=gene4180;Name=YPC_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20985 NC_017263.1 Protein Homology CDS 499 996 . + 0 ID=cds4077;Parent=gene4180;Dbxref=Genbank:WP_002428538.1;Name=WP_002428538.1;gbkey=CDS;product=transposase;protein_id=WP_002428538.1;transl_table=11 NC_017263.1 RefSeq gene 1059 1451 . - . ID=gene4181;Name=YPC_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20990 NC_017263.1 Protein Homology CDS 1059 1451 . - 0 ID=cds4078;Parent=gene4181;Dbxref=Genbank:WP_002213403.1;Name=WP_002213403.1;gbkey=CDS;product=YopE regulator;protein_id=WP_002213403.1;transl_table=11 NC_017263.1 RefSeq gene 1720 2304 . + . ID=gene4182;Name=YPC_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS20995;old_locus_tag=YPC_4663 NC_017263.1 Protein Homology CDS 1720 2304 . + 0 ID=cds4079;Parent=gene4182;Dbxref=Genbank:WP_002353311.1;Name=WP_002353311.1;gbkey=CDS;product=virulence protein YopE;protein_id=WP_002353311.1;transl_table=11 NC_017263.1 RefSeq gene 2444 2743 . - . ID=gene4183;Name=YPC_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21000 NC_017263.1 Protein Homology CDS 2444 2743 . - 0 ID=cds4080;Parent=gene4183;Dbxref=Genbank:WP_002213360.1;Name=WP_002213360.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002213360.1;transl_table=11 NC_017263.1 RefSeq gene 2736 2978 . - . ID=gene4184;Name=YPC_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21005 NC_017263.1 Protein Homology CDS 2736 2978 . - 0 ID=cds4081;Parent=gene4184;Dbxref=Genbank:WP_002224342.1;Name=WP_002224342.1;gbkey=CDS;product=antitoxin ParD;protein_id=WP_002224342.1;transl_table=11 NC_017263.1 RefSeq gene 3824 4072 . - . ID=gene4185;Name=YPC_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21010 NC_017263.1 Protein Homology CDS 3824 4072 . - 0 ID=cds4082;Parent=gene4185;Dbxref=Genbank:WP_017204796.1;Name=WP_017204796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_017204796.1;transl_table=11 NC_017263.1 RefSeq repeat_region 3879 4112 . + . ID=id373;gbkey=repeat_region NC_017263.1 RefSeq gene 4240 5205 . - . ID=gene4186;Name=YPC_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21015 NC_017263.1 Protein Homology CDS 4240 5205 . - 0 ID=cds4083;Parent=gene4186;Dbxref=Genbank:WP_002213354.1;Name=WP_002213354.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002213354.1;transl_table=11 NC_017263.1 RefSeq gene 5202 6368 . - . ID=gene4187;Name=YPC_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21020 NC_017263.1 Protein Homology CDS 5202 6368 . - 0 ID=cds4084;Parent=gene4187;Dbxref=Genbank:WP_002220902.1;Name=WP_002220902.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002220902.1;transl_table=11 NC_017263.1 RefSeq repeat_region 7111 8345 . + . ID=id374;gbkey=repeat_region NC_017263.1 RefSeq gene 7168 7362 . - . ID=gene4188;Name=YPC_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21025;old_locus_tag=YPC_4672 NC_017263.1 Protein Homology CDS 7168 7362 . - 0 ID=cds4085;Parent=gene4188;Dbxref=Genbank:WP_002229766.1;Name=WP_002229766.1;gbkey=CDS;product=transposase;protein_id=WP_002229766.1;transl_table=11 NC_017263.1 RefSeq gene 7474 7932 . - . ID=gene4189;Name=YPC_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21030;old_locus_tag=YPC_4673 NC_017263.1 Protein Homology CDS 7474 7932 . - 0 ID=cds4086;Parent=gene4189;Dbxref=Genbank:WP_002229768.1;Name=WP_002229768.1;gbkey=CDS;product=transposase;protein_id=WP_002229768.1;transl_table=11 NC_017263.1 RefSeq gene 7956 8273 . - . ID=gene4190;Name=YPC_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21035;old_locus_tag=YPC_4674 NC_017263.1 Protein Homology CDS 7956 8273 . - 0 ID=cds4087;Parent=gene4190;Dbxref=Genbank:WP_002213008.1;Name=WP_002213008.1;gbkey=CDS;product=transposase;protein_id=WP_002213008.1;transl_table=11 NC_017263.1 RefSeq gene 8380 8997 . - . ID=gene4191;Name=YPC_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21040;old_locus_tag=YPC_4675 NC_017263.1 Protein Homology CDS 8380 8997 . - 0 ID=cds4088;Parent=gene4191;Dbxref=Genbank:WP_002353315.1;Name=WP_002353315.1;gbkey=CDS;product=conjugal transfer protein TraT;protein_id=WP_002353315.1;transl_table=11 NC_017263.1 RefSeq repeat_region 9304 9449 . + . ID=id375;gbkey=repeat_region NC_017263.1 RefSeq gene 9607 10155 . - . ID=gene4192;Name=YPC_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21045 NC_017263.1 Protein Homology CDS 9607 10155 . - 0 ID=cds4089;Parent=gene4192;Dbxref=Genbank:WP_002213007.1;Name=WP_002213007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213007.1;transl_table=11 NC_017263.1 RefSeq gene 10655 11623 . + . ID=gene4193;Name=YPC_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21050 NC_017263.1 Protein Homology CDS 10655 11623 . + 0 ID=cds4090;Parent=gene4193;Dbxref=Genbank:WP_002213006.1;Name=WP_002213006.1;gbkey=CDS;product=cysteine protease;protein_id=WP_002213006.1;transl_table=11 NC_017263.1 RefSeq gene 11623 12021 . + . ID=gene4194;Name=YPC_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21055 NC_017263.1 Protein Homology CDS 11623 12021 . + 0 ID=cds4091;Parent=gene4194;Dbxref=Genbank:WP_002213004.1;Name=WP_002213004.1;gbkey=CDS;product=chaperone protein SycT;protein_id=WP_002213004.1;transl_table=11 NC_017263.1 RefSeq gene 12065 12376 . - . ID=gene4195;Name=YPC_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21060 NC_017263.1 Protein Homology CDS 12065 12376 . - 0 ID=cds4092;Parent=gene4195;Dbxref=Genbank:WP_002233188.1;Name=WP_002233188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233188.1;transl_table=11 NC_017263.1 RefSeq repeat_region 12424 12763 . + . ID=id376;gbkey=repeat_region NC_017263.1 RefSeq gene 12726 13145 . + . ID=gene4196;Name=YPC_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21065 NC_017263.1 Protein Homology CDS 12726 13145 . + 0 ID=cds4093;Parent=gene4196;Dbxref=Genbank:WP_002222515.1;Name=WP_002222515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222515.1;transl_table=11 NC_017263.1 RefSeq repeat_region 13619 13892 . + . ID=id377;gbkey=repeat_region NC_017263.1 RefSeq gene 14123 14338 . + . ID=gene4197;Name=YPC_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21070 NC_017263.1 Protein Homology CDS 14123 14338 . + 0 ID=cds4094;Parent=gene4197;Dbxref=Genbank:WP_002353323.1;Name=WP_002353323.1;gbkey=CDS;product=transposase;protein_id=WP_002353323.1;transl_table=11 NC_017263.1 RefSeq gene 14381 15610 . - . ID=gene4198;Name=YPC_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21075;old_locus_tag=YPC_4688 NC_017263.1 Protein Homology CDS 14381 15610 . - 0 ID=cds4095;Parent=gene4198;Dbxref=Genbank:WP_002229779.1;Name=WP_002229779.1;gbkey=CDS;product=outer membrane protein YopM;protein_id=WP_002229779.1;transl_table=11 NC_017263.1 RefSeq gene 16004 16213 . - . ID=gene4199;Name=YPC_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21080;old_locus_tag=YPC_4689 NC_017263.1 Protein Homology CDS 16004 16213 . - 0 ID=cds4096;Parent=gene4199;Dbxref=Genbank:WP_002229781.1;Name=WP_002229781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229781.1;transl_table=11 NC_017263.1 RefSeq repeat_region 16647 16900 . + . ID=id378;gbkey=repeat_region NC_017263.1 RefSeq gene 16971 17114 . + . ID=gene4200;Name=YPC_RS21085;end_range=17114,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS21085;old_locus_tag=YPC_4693;partial=true;pseudo=true NC_017263.1 Protein Homology CDS 16971 17114 . + 0 ID=cds4097;Parent=gene4200;end_range=17114,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NC_017263.1 RefSeq gene 17551 18471 . - . ID=gene4201;Name=YPC_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21090;old_locus_tag=YPC_4694 NC_017263.1 Protein Homology CDS 17551 18471 . - 0 ID=cds4098;Parent=gene4201;Dbxref=Genbank:WP_002212987.1;Name=WP_002212987.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212987.1;transl_table=11 NC_017263.1 RefSeq gene 18490 19695 . - . ID=gene4202;Name=YPC_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21095 NC_017263.1 Protein Homology CDS 18490 19695 . - 0 ID=cds4099;Parent=gene4202;Dbxref=Genbank:WP_002212985.1;Name=WP_002212985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212985.1;transl_table=11 NC_017263.1 RefSeq gene 19673 20179 . - . ID=gene4203;Name=YPC_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21100 NC_017263.1 Protein Homology CDS 19673 20179 . - 0 ID=cds4100;Parent=gene4203;Dbxref=Genbank:WP_002222758.1;Name=WP_002222758.1;gbkey=CDS;product=low calcium response locus protein H;protein_id=WP_002222758.1;transl_table=11 NC_017263.1 RefSeq gene 20192 21172 . - . ID=gene4204;Name=YPC_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21105;old_locus_tag=YPC_4697 NC_017263.1 Protein Homology CDS 20192 21172 . - 0 ID=cds4101;Parent=gene4204;Dbxref=Genbank:WP_002212981.1;Name=WP_002212981.1;gbkey=CDS;product=Virulence-associated V antigen;protein_id=WP_002212981.1;transl_table=11 NC_017263.1 RefSeq gene 21174 21461 . - . ID=gene4205;Name=YPC_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21110;old_locus_tag=YPC_4698 NC_017263.1 Protein Homology CDS 21174 21461 . - 0 ID=cds4102;Parent=gene4205;Dbxref=Genbank:WP_002212973.1;Name=WP_002212973.1;gbkey=CDS;product=low calcium response locus protein G;protein_id=WP_002212973.1;transl_table=11 NC_017263.1 RefSeq gene 21503 21943 . - . ID=gene4206;Name=YPC_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21115 NC_017263.1 Protein Homology CDS 21503 21943 . - 0 ID=cds4103;Parent=gene4206;Dbxref=Genbank:WP_002220918.1;Name=WP_002220918.1;gbkey=CDS;product=low calcium response locus protein R;protein_id=WP_002220918.1;transl_table=11 NC_017263.1 RefSeq gene 21940 24054 . - . ID=gene4207;Name=YPC_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21120 NC_017263.1 Protein Homology CDS 21940 24054 . - 0 ID=cds4104;Parent=gene4207;Dbxref=Genbank:WP_002212971.1;Name=WP_002212971.1;gbkey=CDS;product=low calcium response locus protein D;protein_id=WP_002212971.1;transl_table=11 NC_017263.1 RefSeq gene 24041 24379 . - . ID=gene4208;Name=YPC_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21125 NC_017263.1 Protein Homology CDS 24041 24379 . - 0 ID=cds4105;Parent=gene4208;Dbxref=Genbank:WP_032465674.1;Name=WP_032465674.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_032465674.1;transl_table=11 NC_017263.1 RefSeq gene 24382 24750 . - . ID=gene4209;Name=YPC_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21130 NC_017263.1 Protein Homology CDS 24382 24750 . - 0 ID=cds4106;Parent=gene4209;Dbxref=Genbank:WP_002212969.1;Name=WP_002212969.1;gbkey=CDS;product=translocation protein YopX;protein_id=WP_002212969.1;transl_table=11 NC_017263.1 RefSeq gene 24747 25118 . - . ID=gene4210;Name=YPC_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21135 NC_017263.1 Protein Homology CDS 24747 25118 . - 0 ID=cds4107;Parent=gene4210;Dbxref=Genbank:WP_002229794.1;Name=WP_002229794.1;gbkey=CDS;product=chaperone protein SycN;protein_id=WP_002229794.1;transl_table=11 NC_017263.1 RefSeq gene 25105 25383 . - . ID=gene4211;Name=YPC_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21140 NC_017263.1 Protein Homology CDS 25105 25383 . - 0 ID=cds4108;Parent=gene4211;Dbxref=Genbank:WP_002212965.1;Name=WP_002212965.1;gbkey=CDS;product=protein TyeA;protein_id=WP_002212965.1;transl_table=11 NC_017263.1 RefSeq gene 25364 26245 . - . ID=gene4212;Name=YPC_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21145 NC_017263.1 Protein Homology CDS 25364 26245 . - 0 ID=cds4109;Parent=gene4212;Dbxref=Genbank:WP_002212958.1;Name=WP_002212958.1;gbkey=CDS;product=outer membrane protein YopN;protein_id=WP_002212958.1;transl_table=11 NC_017263.1 RefSeq gene 26443 27762 . + . ID=gene4213;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPC_RS21150 NC_017263.1 Protein Homology CDS 26443 27762 . + 0 ID=cds4110;Parent=gene4213;Dbxref=Genbank:WP_002212955.1;Name=WP_002212955.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_002212955.1;transl_table=11 NC_017263.1 RefSeq gene 27759 28223 . + . ID=gene4214;Name=YPC_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21155 NC_017263.1 Protein Homology CDS 27759 28223 . + 0 ID=cds4111;Parent=gene4214;Dbxref=Genbank:WP_002212952.1;Name=WP_002212952.1;gbkey=CDS;product=translocation protein YopO;protein_id=WP_002212952.1;transl_table=11 NC_017263.1 RefSeq gene 28223 29590 . + . ID=gene4215;Name=YPC_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21160 NC_017263.1 Protein Homology CDS 28223 29590 . + 0 ID=cds4112;Parent=gene4215;Dbxref=Genbank:WP_002212950.1;Name=WP_002212950.1;gbkey=CDS;product=translocation protein YopP;protein_id=WP_002212950.1;transl_table=11 NC_017263.1 RefSeq gene 29587 30510 . + . ID=gene4216;Name=YPC_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21165 NC_017263.1 Protein Homology CDS 29587 30510 . + 0 ID=cds4113;Parent=gene4216;Dbxref=Genbank:WP_002212948.1;Name=WP_002212948.1;gbkey=CDS;product=translocation protein YopQ;protein_id=WP_002212948.1;transl_table=11 NC_017263.1 RefSeq gene 30507 31160 . + . ID=gene4217;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPC_RS21170 NC_017263.1 Protein Homology CDS 30507 31160 . + 0 ID=cds4114;Parent=gene4217;Dbxref=Genbank:WP_002212947.1;Name=WP_002212947.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=translocation protein YopR;protein_id=WP_002212947.1;transl_table=11 NC_017263.1 RefSeq gene 31162 31428 . + . ID=gene4218;Name=YPC_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21175 NC_017263.1 Protein Homology CDS 31162 31428 . + 0 ID=cds4115;Parent=gene4218;Dbxref=Genbank:WP_002212945.1;Name=WP_002212945.1;gbkey=CDS;product=translocation protein YopS;protein_id=WP_002212945.1;transl_table=11 NC_017263.1 RefSeq gene 31425 32210 . + . ID=gene4219;Name=YPC_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21180 NC_017263.1 Protein Homology CDS 31425 32210 . + 0 ID=cds4116;Parent=gene4219;Dbxref=Genbank:WP_002212938.1;Name=WP_002212938.1;gbkey=CDS;product=translocation protein YopT;protein_id=WP_002212938.1;transl_table=11 NC_017263.1 RefSeq gene 32210 33274 . + . ID=gene4220;Name=YPC_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21185 NC_017263.1 Protein Homology CDS 32210 33274 . + 0 ID=cds4117;Parent=gene4220;Dbxref=Genbank:WP_002212936.1;Name=WP_002212936.1;gbkey=CDS;product=translocation protein YopU;protein_id=WP_002212936.1;transl_table=11 NC_017263.1 RefSeq gene 33850 34245 . + . ID=gene4221;Name=YPC_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21190;old_locus_tag=YPC_4714 NC_017263.1 Protein Homology CDS 33850 34245 . + 0 ID=cds4118;Parent=gene4221;Dbxref=Genbank:WP_002222527.1;Name=WP_002222527.1;gbkey=CDS;product=type III secretion system chaperone VirG;protein_id=WP_002222527.1;transl_table=11 NC_017263.1 RefSeq gene 34369 35184 . + . ID=gene4222;Name=YPC_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21195;old_locus_tag=YPC_4715 NC_017263.1 Protein Homology CDS 34369 35184 . + 0 ID=cds4119;Parent=gene4222;Dbxref=Genbank:WP_002212931.1;Name=WP_002212931.1;gbkey=CDS;product=thermoregulatory protein LcrF;protein_id=WP_002212931.1;transl_table=11 NC_017263.1 RefSeq gene 35263 35361 . + . ID=gene4223;Name=YPC_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21200;old_locus_tag=YPC_4716 NC_017263.1 Protein Homology CDS 35263 35361 . + 0 ID=cds4120;Parent=gene4223;Dbxref=Genbank:WP_002229797.1;Name=WP_002229797.1;gbkey=CDS;product=translocation protein YopA;protein_id=WP_002229797.1;transl_table=11 NC_017263.1 RefSeq gene 35587 36000 . + . ID=gene4224;Name=YPC_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21205;old_locus_tag=YPC_4717 NC_017263.1 Protein Homology CDS 35587 36000 . + 0 ID=cds4121;Parent=gene4224;Dbxref=Genbank:WP_002212925.1;Name=WP_002212925.1;gbkey=CDS;product=chaperone protein YscB;protein_id=WP_002212925.1;transl_table=11 NC_017263.1 RefSeq gene 36006 37828 . + . ID=gene4225;Name=YPC_RS21210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS21210;pseudo=true NC_017263.1 Protein Homology CDS 36006 37828 . + 0 ID=cds4122;Parent=gene4225;exception=annotated by transcript or proteomic data;gbkey=CDS;product=secretin;pseudo=true;transl_table=11 NC_017263.1 RefSeq gene 37825 39084 . + . ID=gene4226;Name=YPC_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21215 NC_017263.1 Protein Homology CDS 37825 39084 . + 0 ID=cds4123;Parent=gene4226;Dbxref=Genbank:WP_002212919.1;Name=WP_002212919.1;gbkey=CDS;product=preprotein translocase D;protein_id=WP_002212919.1;transl_table=11 NC_017263.1 RefSeq gene 39081 39281 . + . ID=gene4227;Name=YPC_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21220 NC_017263.1 Protein Homology CDS 39081 39281 . + 0 ID=cds4124;Parent=gene4227;Dbxref=Genbank:WP_002212917.1;Name=WP_002212917.1;gbkey=CDS;product=preprotein translocase SecE;protein_id=WP_002212917.1;transl_table=11 NC_017263.1 RefSeq gene 39282 39545 . + . ID=gene4228;Name=YPC_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21225;old_locus_tag=YPC_4722 NC_017263.1 Protein Homology CDS 39282 39545 . + 0 ID=cds4125;Parent=gene4228;Dbxref=Genbank:WP_002212916.1;Name=WP_002212916.1;gbkey=CDS;product=type III export protein pscF;protein_id=WP_002212916.1;transl_table=11 NC_017263.1 RefSeq gene 39547 39894 . + . ID=gene4229;Name=YPC_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21230 NC_017263.1 Protein Homology CDS 39547 39894 . + 0 ID=cds4126;Parent=gene4229;Dbxref=Genbank:WP_002229801.1;Name=WP_002229801.1;gbkey=CDS;product=preprotein translocase G;protein_id=WP_002229801.1;transl_table=11 NC_017263.1 RefSeq gene 39891 40388 . + . ID=gene4230;Name=YPC_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21235 NC_017263.1 Protein Homology CDS 39891 40388 . + 0 ID=cds4127;Parent=gene4230;Dbxref=Genbank:WP_002212915.1;Name=WP_002212915.1;gbkey=CDS;product=translocation protein YopH;protein_id=WP_002212915.1;transl_table=11 NC_017263.1 RefSeq gene 40398 40736 . + . ID=gene4231;Name=YPC_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21240;old_locus_tag=YPC_4725 NC_017263.1 Protein Homology CDS 40398 40736 . + 0 ID=cds4128;Parent=gene4231;Dbxref=Genbank:WP_032465675.1;Name=WP_032465675.1;gbkey=CDS;product=preprotein translocase I;protein_id=WP_032465675.1;transl_table=11 NC_017263.1 RefSeq gene 40743 41477 . + . ID=gene4232;Name=YPC_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21245;old_locus_tag=YPC_4726 NC_017263.1 Protein Homology CDS 40743 41477 . + 0 ID=cds4129;Parent=gene4232;Dbxref=Genbank:WP_002212912.1;Name=WP_002212912.1;gbkey=CDS;product=translocation protein YopJ;protein_id=WP_002212912.1;transl_table=11 NC_017263.1 RefSeq gene 41480 42106 . + . ID=gene4233;Name=YPC_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21250 NC_017263.1 Protein Homology CDS 41480 42106 . + 0 ID=cds4130;Parent=gene4233;Dbxref=Genbank:WP_002212911.1;Name=WP_002212911.1;gbkey=CDS;product=preprotein translocase K;protein_id=WP_002212911.1;transl_table=11 NC_017263.1 RefSeq gene 42085 42717 . + . ID=gene4234;Name=YPC_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21255 NC_017263.1 Protein Homology CDS 42085 42717 . + 0 ID=cds4131;Parent=gene4234;Dbxref=Genbank:WP_002212909.1;Name=WP_002212909.1;gbkey=CDS;product=type III secretion system protein;protein_id=WP_002212909.1;transl_table=11 NC_017263.1 RefSeq gene 42942 43289 . + . ID=gene4235;Name=YPC_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21260;old_locus_tag=YPC_4729 NC_017263.1 Protein Homology CDS 42942 43289 . + 0 ID=cds4132;Parent=gene4235;Dbxref=Genbank:WP_002212907.1;Name=WP_002212907.1;gbkey=CDS;product=translocation protein YopM;protein_id=WP_002212907.1;transl_table=11 NC_017263.1 RefSeq gene 43837 44103 . + . ID=gene4236;Name=YPC_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21265;old_locus_tag=YPC_4730 NC_017263.1 Protein Homology CDS 43837 44103 . + 0 ID=cds4133;Parent=gene4236;Dbxref=Genbank:WP_002212900.1;Name=WP_002212900.1;gbkey=CDS;product=low calcium response locus protein S;protein_id=WP_002212900.1;transl_table=11 NC_017263.1 RefSeq gene 44139 44561 . + . ID=gene4237;Name=YPC_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21270 NC_017263.1 Protein Homology CDS 44139 44561 . + 0 ID=cds4134;Parent=gene4237;Dbxref=Genbank:WP_002229803.1;Name=WP_002229803.1;gbkey=CDS;product=low calcium response locus protein T;protein_id=WP_002229803.1;transl_table=11 NC_017263.1 RefSeq gene 44579 44866 . + . ID=gene4238;Name=YPC_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21275 NC_017263.1 Protein Homology CDS 44579 44866 . + 0 ID=cds4135;Parent=gene4238;Dbxref=Genbank:WP_002356326.1;Name=WP_002356326.1;gbkey=CDS;product=integrase;protein_id=WP_002356326.1;transl_table=11 NC_017263.1 RefSeq gene 45378 46784 . - . ID=gene4239;Name=YPC_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21280;old_locus_tag=YPC_4734 NC_017263.1 Protein Homology CDS 45378 46784 . - 0 ID=cds4136;Parent=gene4239;Dbxref=Genbank:WP_002213278.1;Name=WP_002213278.1;gbkey=CDS;product=tyrosine-protein phosphatase YopH;protein_id=WP_002213278.1;transl_table=11 NC_017263.1 RefSeq gene 47067 47273 . - . ID=gene4240;Name=YPC_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21285;old_locus_tag=YPC_4735 NC_017263.1 Protein Homology CDS 47067 47273 . - 0 ID=cds4137;Parent=gene4240;Dbxref=Genbank:WP_002213282.1;Name=WP_002213282.1;gbkey=CDS;product=transposase;protein_id=WP_002213282.1;transl_table=11 NC_017263.1 RefSeq repeat_region 47302 47913 . + . ID=id379;gbkey=repeat_region NC_017263.1 RefSeq gene 47405 47881 . + . ID=gene4241;Name=YPC_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21290 NC_017263.1 Protein Homology CDS 47405 47881 . + 0 ID=cds4138;Parent=gene4241;Dbxref=Genbank:WP_002213284.1;Name=WP_002213284.1;gbkey=CDS;product=integrase;protein_id=WP_002213284.1;transl_table=11 NC_017263.1 RefSeq gene 48467 49333 . - . ID=gene4242;Name=YPC_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21295;old_locus_tag=YPC_4737 NC_017263.1 Protein Homology CDS 48467 49333 . - 0 ID=cds4139;Parent=gene4242;Dbxref=Genbank:WP_002225474.1;Name=WP_002225474.1;gbkey=CDS;product=effector protein YopJ;protein_id=WP_002225474.1;transl_table=11 NC_017263.1 RefSeq gene 49729 51926 . - . ID=gene4243;Name=YPC_RS21300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS21300;pseudo=true NC_017263.1 Protein Homology CDS 49729 51926 . - 0 ID=cds4140;Parent=gene4243;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protein kinase;pseudo=true;transl_table=11 NC_017263.1 RefSeq gene 51934 52383 . - . ID=gene4244;Name=YPC_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21305;old_locus_tag=YPC_4740 NC_017263.1 Protein Homology CDS 51934 52383 . - 0 ID=cds4141;Parent=gene4244;Dbxref=Genbank:WP_002229809.1;Name=WP_002229809.1;gbkey=CDS;product=molecular chaperone Tir;protein_id=WP_002229809.1;transl_table=11 NC_017263.1 RefSeq repeat_region 52621 52954 . + . ID=id380;gbkey=repeat_region NC_017263.1 RefSeq gene 52679 52873 . - . ID=gene4245;Name=YPC_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21310 NC_017263.1 Protein Homology CDS 52679 52873 . - 0 ID=cds4142;Parent=gene4245;Dbxref=Genbank:WP_011191370.1;Name=WP_011191370.1;gbkey=CDS;product=transposase;protein_id=WP_011191370.1;transl_table=11 NC_017263.1 RefSeq gene 54541 55407 . - . ID=gene4246;Name=YPC_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21315;old_locus_tag=YPC_4744 NC_017263.1 Protein Homology CDS 54541 55407 . - 0 ID=cds4143;Parent=gene4246;Dbxref=Genbank:WP_002225475.1;Name=WP_002225475.1;gbkey=CDS;product=replication protein;protein_id=WP_002225475.1;transl_table=11 NC_017263.1 RefSeq gene 55400 55474 . - . ID=gene4247;Name=YPC_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21320 NC_017263.1 Protein Homology CDS 55400 55474 . - 0 ID=cds4144;Parent=gene4247;Dbxref=Genbank:WP_002233140.1;Name=WP_002233140.1;Note=acts to regulate the expression of the plasmid replication protein RepA in the IncFII plasmid group;gbkey=CDS;product=RepA leader peptide Tap-containing protein;protein_id=WP_002233140.1;transl_table=11 NC_017263.1 RefSeq gene 55492 55581 . + . ID=gene4248;Name=copA;gbkey=Gene;gene=copA;gene_biotype=antisense_RNA;locus_tag=YPC_RS22085 NC_017263.1 RefSeq ncRNA 55492 55581 . + . ID=rna97;Parent=gene4248;Dbxref=ASAP:BBE-0004890,ASAP:BBE-0004890 ERIC;gbkey=ncRNA;gene=copA;ncrna_class=antisense_RNA;product=antisense RNA CopA NC_017263.1 RefSeq exon 55492 55581 . + . ID=id381;Parent=rna97;Dbxref=ASAP:BBE-0004890,ASAP:BBE-0004890 ERIC;gbkey=ncRNA;gene=copA;ncrna_class=antisense_RNA;product=antisense RNA CopA NC_017263.1 RefSeq gene 55716 55970 . - . ID=gene4249;Name=YPC_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21325;old_locus_tag=YPC_4746 NC_017263.1 Protein Homology CDS 55716 55970 . - 0 ID=cds4145;Parent=gene4249;Dbxref=Genbank:WP_002229817.1;Name=WP_002229817.1;gbkey=CDS;product=replication protein;protein_id=WP_002229817.1;transl_table=11 NC_017263.1 RefSeq gene 56108 56356 . - . ID=gene4250;Name=YPC_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21330 NC_017263.1 Protein Homology CDS 56108 56356 . - 0 ID=cds4146;Parent=gene4250;Dbxref=Genbank:WP_002233137.1;Name=WP_002233137.1;gbkey=CDS;product=phospholipase;protein_id=WP_002233137.1;transl_table=11 NC_017263.1 RefSeq repeat_region 56358 57594 . + . ID=id382;gbkey=repeat_region NC_017263.1 RefSeq gene 56773 57180 . - . ID=gene4251;Name=YPC_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21335;old_locus_tag=YPC_4749 NC_017263.1 Protein Homology CDS 56773 57180 . - 0 ID=cds4147;Parent=gene4251;Dbxref=Genbank:WP_002213294.1;Name=WP_002213294.1;gbkey=CDS;product=transposase;protein_id=WP_002213294.1;transl_table=11 NC_017263.1 RefSeq gene 57204 57521 . - . ID=gene4252;Name=YPC_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21340;old_locus_tag=YPC_4750 NC_017263.1 Protein Homology CDS 57204 57521 . - 0 ID=cds4148;Parent=gene4252;Dbxref=Genbank:WP_002213244.1;Name=WP_002213244.1;gbkey=CDS;product=transposase;protein_id=WP_002213244.1;transl_table=11 NC_017263.1 RefSeq gene 57693 58151 . - . ID=gene4253;Name=YPC_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21345;old_locus_tag=YPC_4751 NC_017263.1 Protein Homology CDS 57693 58151 . - 0 ID=cds4149;Parent=gene4253;Dbxref=Genbank:WP_002213246.1;Name=WP_002213246.1;gbkey=CDS;product=DNA helicase TraI;protein_id=WP_002213246.1;transl_table=11 NC_017263.1 RefSeq repeat_region 58194 58588 . + . ID=id383;gbkey=repeat_region NC_017263.1 RefSeq gene 58220 58489 . + . ID=gene4254;Name=YPC_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21350 NC_017263.1 Protein Homology CDS 58220 58489 . + 0 ID=cds4150;Parent=gene4254;Dbxref=Genbank:WP_042469136.1;Name=WP_042469136.1;gbkey=CDS;product=transposase;protein_id=WP_042469136.1;transl_table=11 NC_017263.1 RefSeq gene 58486 58692 . - . ID=gene4255;Name=YPC_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21355 NC_017263.1 Protein Homology CDS 58486 58692 . - 0 ID=cds4151;Parent=gene4255;Dbxref=Genbank:WP_011557428.1;Name=WP_011557428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011557428.1;transl_table=11 NC_017263.1 RefSeq gene 58815 59390 . - . ID=gene4256;Name=YPC_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21360 NC_017263.1 Protein Homology CDS 58815 59390 . - 0 ID=cds4152;Parent=gene4256;Dbxref=Genbank:WP_002353282.1;Name=WP_002353282.1;gbkey=CDS;product=adhesin;protein_id=WP_002353282.1;transl_table=11 NC_017263.1 RefSeq gene 59867 60118 . - . ID=gene4257;Name=YPC_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21365 NC_017263.1 Protein Homology CDS 59867 60118 . - 0 ID=cds4153;Parent=gene4257;Dbxref=Genbank:WP_002356450.1;Name=WP_002356450.1;gbkey=CDS;product=adhesin;protein_id=WP_002356450.1;transl_table=11 NC_017263.1 RefSeq gene 60724 61104 . + . ID=gene4258;Name=YPC_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21370;old_locus_tag=YPC_4754 NC_017263.1 Protein Homology CDS 60724 61104 . + 0 ID=cds4154;Parent=gene4258;Dbxref=Genbank:WP_002213254.1;Name=WP_002213254.1;gbkey=CDS;product=transposase;protein_id=WP_002213254.1;transl_table=11 NC_017263.1 RefSeq repeat_region 60801 60946 . + . ID=id384;gbkey=repeat_region NC_017263.1 RefSeq gene 61101 63416 . - . ID=gene4259;Name=YPC_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21375;old_locus_tag=YPC_4755 NC_017263.1 Protein Homology CDS 61101 63416 . - 0 ID=cds4155;Parent=gene4259;Dbxref=Genbank:WP_014501242.1;Name=WP_014501242.1;gbkey=CDS;product=transposase;protein_id=WP_014501242.1;transl_table=11 NC_017263.1 RefSeq gene 63580 64131 . + . ID=gene4260;Name=YPC_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21380;old_locus_tag=YPC_4756 NC_017263.1 Protein Homology CDS 63580 64131 . + 0 ID=cds4156;Parent=gene4260;Dbxref=Genbank:WP_002213258.1;Name=WP_002213258.1;gbkey=CDS;product=recombinase;protein_id=WP_002213258.1;transl_table=11 NC_017263.1 RefSeq gene 64150 64614 . + . ID=gene4261;Name=YPC_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21385;old_locus_tag=YPC_4757 NC_017263.1 Protein Homology CDS 64150 64614 . + 0 ID=cds4157;Parent=gene4261;Dbxref=Genbank:WP_002224338.1;Name=WP_002224338.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224338.1;transl_table=11 NC_017263.1 RefSeq gene 64753 65082 . + . ID=gene4262;Name=YPC_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21390;old_locus_tag=YPC_4758 NC_017263.1 Protein Homology CDS 64753 65082 . + 0 ID=cds4158;Parent=gene4262;Dbxref=Genbank:WP_002229829.1;Name=WP_002229829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229829.1;transl_table=11 NC_017263.1 RefSeq region 65102 66313 . + . ID=id385;Dbxref=ASAP:BBE-0004989,ASAP:BBE-0004989 ERIC;Note=ISYpe1.1;gbkey=mobile_element NC_017263.1 RefSeq gene 65182 65448 . + . ID=gene4263;Name=YPC_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21395;old_locus_tag=YPC_4759 NC_017263.1 Protein Homology CDS 65182 65448 . + 0 ID=cds4159;Parent=gene4263;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_017263.1 RefSeq gene 65454 66281 . + . ID=gene4264;Name=YPC_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21400;old_locus_tag=YPC_4760 NC_017263.1 Protein Homology CDS 65454 66281 . + 0 ID=cds4160;Parent=gene4264;Dbxref=Genbank:WP_032465673.1;Name=WP_032465673.1;gbkey=CDS;product=transposase;protein_id=WP_032465673.1;transl_table=11 NC_017263.1 RefSeq repeat_region 65702 66313 . + . ID=id386;gbkey=repeat_region NC_017263.1 RefSeq gene 66429 66854 . - . ID=gene4265;Name=YPC_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21405;old_locus_tag=YPC_4761 NC_017263.1 Protein Homology CDS 66429 66854 . - 0 ID=cds4161;Parent=gene4265;Dbxref=Genbank:WP_002213267.1;Name=WP_002213267.1;gbkey=CDS;product=yopH targeting protein;protein_id=WP_002213267.1;transl_table=11 NC_017263.1 RefSeq gene 67231 67629 . - . ID=gene4266;Name=YPC_RS21410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS21410;old_locus_tag=YPC_4762;partial=true;pseudo=true;start_range=.,67231 NC_017263.1 Protein Homology CDS 67231 67629 . - 0 ID=cds4162;Parent=gene4266;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,67231;transl_table=11 ##sequence-region NC_017266.1 1 99286 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=547048 NC_017266.1 RefSeq region 1 99286 . + . ID=id387;Dbxref=taxon:547048;Is_circular=true;Name=pMT;biovar=Medievalis;country=China;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=pMT;strain=Harbin 35;sub-species=pestis NC_017266.1 RefSeq gene 99006 99359 . + . ID=gene4267;Name=YPC_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21420 NC_017266.1 Protein Homology CDS 99006 99359 . + 0 ID=cds4163;Parent=gene4267;Dbxref=Genbank:WP_002225465.1;Name=WP_002225465.1;gbkey=CDS;product=DNA ligase;protein_id=WP_002225465.1;transl_table=11 NC_017266.1 RefSeq repeat_region 1 1954 . + . ID=id388;gbkey=repeat_region NC_017266.1 RefSeq region 1 1954 . + . ID=id389;Dbxref=ASAP:BBE-0004990,ERIC:BBE-0004990;Note=IS100kyp.29;gbkey=mobile_element NC_017266.1 RefSeq gene 87 1109 . + . ID=gene4268;Name=YPC_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21425;old_locus_tag=YPC_4764 NC_017266.1 Protein Homology CDS 87 1109 . + 0 ID=cds4164;Parent=gene4268;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017266.1 RefSeq gene 1109 1888 . + . ID=gene4269;Name=YPC_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21430;old_locus_tag=YPC_4765 NC_017266.1 Protein Homology CDS 1109 1888 . + 0 ID=cds4165;Parent=gene4269;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017266.1 RefSeq gene 2018 2626 . - . ID=gene4270;Name=YPC_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21435;old_locus_tag=YPC_4766 NC_017266.1 Protein Homology CDS 2018 2626 . - 0 ID=cds4166;Parent=gene4270;Dbxref=Genbank:WP_002211769.1;Name=WP_002211769.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211769.1;transl_table=11 NC_017266.1 RefSeq gene 2719 2931 . - . ID=gene4271;Name=YPC_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21440 NC_017266.1 Protein Homology CDS 2719 2931 . - 0 ID=cds4167;Parent=gene4271;Dbxref=Genbank:WP_002217458.1;Name=WP_002217458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217458.1;transl_table=11 NC_017266.1 RefSeq gene 2928 5816 . - . ID=gene4272;Name=YPC_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21445;old_locus_tag=YPC_4767 NC_017266.1 Protein Homology CDS 2928 5816 . - 0 ID=cds4168;Parent=gene4272;Dbxref=Genbank:WP_002211770.1;Name=WP_002211770.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211770.1;transl_table=11 NC_017266.1 RefSeq gene 5897 6529 . - . ID=gene4273;Name=YPC_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21450;old_locus_tag=YPC_4768 NC_017266.1 Protein Homology CDS 5897 6529 . - 0 ID=cds4169;Parent=gene4273;Dbxref=Genbank:WP_002214116.1;Name=WP_002214116.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214116.1;transl_table=11 NC_017266.1 RefSeq gene 6532 11163 . - . ID=gene4274;Name=YPC_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21455;old_locus_tag=YPC_4769 NC_017266.1 Protein Homology CDS 6532 11163 . - 0 ID=cds4170;Parent=gene4274;Dbxref=Genbank:WP_002214118.1;Name=WP_002214118.1;gbkey=CDS;product=host specificity protein J;protein_id=WP_002214118.1;transl_table=11 NC_017266.1 RefSeq gene 11185 11772 . - . ID=gene4275;Name=YPC_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21460;old_locus_tag=YPC_4770 NC_017266.1 Protein Homology CDS 11185 11772 . - 0 ID=cds4171;Parent=gene4275;Dbxref=Genbank:WP_002211773.1;Name=WP_002211773.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211773.1;transl_table=11 NC_017266.1 RefSeq gene 11760 12557 . - . ID=gene4276;Name=YPC_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21465;old_locus_tag=YPC_4771 NC_017266.1 Protein Homology CDS 11760 12557 . - 0 ID=cds4172;Parent=gene4276;Dbxref=Genbank:WP_002211774.1;Name=WP_002211774.1;gbkey=CDS;product=tail protein;protein_id=WP_002211774.1;transl_table=11 NC_017266.1 RefSeq gene 12550 13248 . - . ID=gene4277;Name=YPC_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21470;old_locus_tag=YPC_4772 NC_017266.1 Protein Homology CDS 12550 13248 . - 0 ID=cds4173;Parent=gene4277;Dbxref=Genbank:WP_002211775.1;Name=WP_002211775.1;gbkey=CDS;product=tail protein;protein_id=WP_002211775.1;transl_table=11 NC_017266.1 RefSeq gene 13338 13673 . - . ID=gene4278;Name=YPC_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21475;old_locus_tag=YPC_4773 NC_017266.1 Protein Homology CDS 13338 13673 . - 0 ID=cds4174;Parent=gene4278;Dbxref=Genbank:WP_000440566.1;Name=WP_000440566.1;gbkey=CDS;product=tail protein;protein_id=WP_000440566.1;transl_table=11 NC_017266.1 RefSeq gene 13715 18292 . - . ID=gene4279;Name=YPC_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21480;old_locus_tag=YPC_4774 NC_017266.1 Protein Homology CDS 13715 18292 . - 0 ID=cds4175;Parent=gene4279;Dbxref=Genbank:WP_002211776.1;Name=WP_002211776.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_002211776.1;transl_table=11 NC_017266.1 RefSeq gene 18300 18533 . - . ID=gene4280;Name=YPC_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21485;old_locus_tag=YPC_4775 NC_017266.1 Protein Homology CDS 18300 18533 . - 0 ID=cds4176;Parent=gene4280;Dbxref=Genbank:WP_002211777.1;Name=WP_002211777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211777.1;transl_table=11 NC_017266.1 RefSeq gene 18650 18967 . - . ID=gene4281;Name=YPC_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21495;old_locus_tag=YPC_4776 NC_017266.1 Protein Homology CDS 18650 18967 . - 0 ID=cds4177;Parent=gene4281;Dbxref=Genbank:WP_000163862.1;Name=WP_000163862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000163862.1;transl_table=11 NC_017266.1 RefSeq gene 19027 19773 . - . ID=gene4282;Name=YPC_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21500;old_locus_tag=YPC_4777 NC_017266.1 Protein Homology CDS 19027 19773 . - 0 ID=cds4178;Parent=gene4282;Dbxref=Genbank:WP_002211778.1;Name=WP_002211778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211778.1;transl_table=11 NC_017266.1 RefSeq gene 19848 20231 . - . ID=gene4283;Name=YPC_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21505;old_locus_tag=YPC_4778 NC_017266.1 Protein Homology CDS 19848 20231 . - 0 ID=cds4179;Parent=gene4283;Dbxref=Genbank:WP_002211779.1;Name=WP_002211779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211779.1;transl_table=11 NC_017266.1 RefSeq gene 20233 20706 . - . ID=gene4284;Name=YPC_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21510;old_locus_tag=YPC_4779 NC_017266.1 Protein Homology CDS 20233 20706 . - 0 ID=cds4180;Parent=gene4284;Dbxref=Genbank:WP_002211780.1;Name=WP_002211780.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211780.1;transl_table=11 NC_017266.1 RefSeq gene 20697 21041 . - . ID=gene4285;Name=YPC_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21515 NC_017266.1 Protein Homology CDS 20697 21041 . - 0 ID=cds4181;Parent=gene4285;Dbxref=Genbank:WP_001027662.1;Name=WP_001027662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001027662.1;transl_table=11 NC_017266.1 RefSeq gene 21139 21972 . - . ID=gene4286;Name=YPC_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21520;old_locus_tag=YPC_4781 NC_017266.1 Protein Homology CDS 21139 21972 . - 0 ID=cds4182;Parent=gene4286;Dbxref=Genbank:WP_002211781.1;Name=WP_002211781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211781.1;transl_table=11 NC_017266.1 RefSeq gene 21972 22406 . - . ID=gene4287;Name=YPC_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21525;old_locus_tag=YPC_4782 NC_017266.1 Protein Homology CDS 21972 22406 . - 0 ID=cds4183;Parent=gene4287;Dbxref=Genbank:WP_002211782.1;Name=WP_002211782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211782.1;transl_table=11 NC_017266.1 RefSeq gene 22450 23112 . - . ID=gene4288;Name=YPC_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21530;old_locus_tag=YPC_4783 NC_017266.1 Protein Homology CDS 22450 23112 . - 0 ID=cds4184;Parent=gene4288;Dbxref=Genbank:WP_002211783.1;Name=WP_002211783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211783.1;transl_table=11 NC_017266.1 RefSeq gene 23187 24062 . - . ID=gene4289;Name=YPC_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21535;old_locus_tag=YPC_4784 NC_017266.1 Protein Homology CDS 23187 24062 . - 0 ID=cds4185;Parent=gene4289;Dbxref=Genbank:WP_002211784.1;Name=WP_002211784.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_002211784.1;transl_table=11 NC_017266.1 RefSeq gene 24089 24989 . - . ID=gene4290;Name=YPC_RS21540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS21540;pseudo=true NC_017266.1 Protein Homology CDS 24089 24989 . - 0 ID=cds4186;Parent=gene4290;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_017266.1 RefSeq gene 25012 26586 . - . ID=gene4291;Name=YPC_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21545;old_locus_tag=YPC_4787 NC_017266.1 Protein Homology CDS 25012 26586 . - 0 ID=cds4187;Parent=gene4291;Dbxref=Genbank:WP_042469162.1;Name=WP_042469162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042469162.1;transl_table=11 NC_017266.1 RefSeq gene 26620 27876 . - . ID=gene4292;Name=YPC_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21550;old_locus_tag=YPC_4788 NC_017266.1 Protein Homology CDS 26620 27876 . - 0 ID=cds4188;Parent=gene4292;Dbxref=Genbank:WP_002211787.1;Name=WP_002211787.1;gbkey=CDS;product=terminase;protein_id=WP_002211787.1;transl_table=11 NC_017266.1 RefSeq gene 27879 28520 . - . ID=gene4293;Name=YPC_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21555;old_locus_tag=YPC_4789 NC_017266.1 Protein Homology CDS 27879 28520 . - 0 ID=cds4189;Parent=gene4293;Dbxref=Genbank:WP_002211788.1;Name=WP_002211788.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211788.1;transl_table=11 NC_017266.1 RefSeq gene 28716 28982 . - . ID=gene4294;Name=YPC_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21560;old_locus_tag=YPC_4790 NC_017266.1 Protein Homology CDS 28716 28982 . - 0 ID=cds4190;Parent=gene4294;Dbxref=Genbank:WP_000176291.1;Name=WP_000176291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000176291.1;transl_table=11 NC_017266.1 RefSeq gene 28992 29882 . - . ID=gene4295;Name=YPC_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21565;old_locus_tag=YPC_4791 NC_017266.1 Protein Homology CDS 28992 29882 . - 0 ID=cds4191;Parent=gene4295;Dbxref=Genbank:WP_002211789.1;Name=WP_002211789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211789.1;transl_table=11 NC_017266.1 RefSeq gene 29888 30142 . - . ID=gene4296;Name=YPC_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21570;old_locus_tag=YPC_4792 NC_017266.1 Protein Homology CDS 29888 30142 . - 0 ID=cds4192;Parent=gene4296;Dbxref=Genbank:WP_002211790.1;Name=WP_002211790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211790.1;transl_table=11 NC_017266.1 RefSeq gene 30135 30773 . - . ID=gene4297;Name=YPC_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21575;old_locus_tag=YPC_4793 NC_017266.1 Protein Homology CDS 30135 30773 . - 0 ID=cds4193;Parent=gene4297;Dbxref=Genbank:WP_002211791.1;Name=WP_002211791.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211791.1;transl_table=11 NC_017266.1 RefSeq gene 30770 31438 . - . ID=gene4298;Name=YPC_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21580;old_locus_tag=YPC_4794 NC_017266.1 Protein Homology CDS 30770 31438 . - 0 ID=cds4194;Parent=gene4298;Dbxref=Genbank:WP_002211792.1;Name=WP_002211792.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002211792.1;transl_table=11 NC_017266.1 RefSeq gene 31438 32136 . - . ID=gene4299;Name=YPC_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21585;old_locus_tag=YPC_4795 NC_017266.1 Protein Homology CDS 31438 32136 . - 0 ID=cds4195;Parent=gene4299;Dbxref=Genbank:WP_002228791.1;Name=WP_002228791.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002228791.1;transl_table=11 NC_017266.1 RefSeq gene 32201 33760 . + . ID=gene4300;Name=YPC_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21590;old_locus_tag=YPC_4796 NC_017266.1 Protein Homology CDS 32201 33760 . + 0 ID=cds4196;Parent=gene4300;Dbxref=Genbank:WP_002211794.1;Name=WP_002211794.1;gbkey=CDS;product=helicase;protein_id=WP_002211794.1;transl_table=11 NC_017266.1 RefSeq gene 33763 34041 . + . ID=gene4301;Name=YPC_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21595;old_locus_tag=YPC_4797 NC_017266.1 Protein Homology CDS 33763 34041 . + 0 ID=cds4197;Parent=gene4301;Dbxref=Genbank:WP_002214131.1;Name=WP_002214131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214131.1;transl_table=11 NC_017266.1 RefSeq gene 34101 34523 . + . ID=gene4302;Name=YPC_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21600;old_locus_tag=YPC_4798 NC_017266.1 Protein Homology CDS 34101 34523 . + 0 ID=cds4198;Parent=gene4302;Dbxref=Genbank:WP_002211796.1;Name=WP_002211796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211796.1;transl_table=11 NC_017266.1 RefSeq gene 34528 35055 . + . ID=gene4303;Name=YPC_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21605;old_locus_tag=YPC_4799 NC_017266.1 Protein Homology CDS 34528 35055 . + 0 ID=cds4199;Parent=gene4303;Dbxref=Genbank:WP_014501254.1;Name=WP_014501254.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_014501254.1;transl_table=11 NC_017266.1 RefSeq gene 35379 36029 . + . ID=gene4304;Name=YPC_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21610;old_locus_tag=YPC_4801 NC_017266.1 Protein Homology CDS 35379 36029 . + 0 ID=cds4200;Parent=gene4304;Dbxref=Genbank:WP_002211799.1;Name=WP_002211799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211799.1;transl_table=11 NC_017266.1 RefSeq gene 36114 36341 . + . ID=gene4305;Name=YPC_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21615;old_locus_tag=YPC_4802 NC_017266.1 Protein Homology CDS 36114 36341 . + 0 ID=cds4201;Parent=gene4305;Dbxref=Genbank:WP_002214137.1;Name=WP_002214137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214137.1;transl_table=11 NC_017266.1 RefSeq gene 36451 36909 . - . ID=gene4306;Name=YPC_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21620;old_locus_tag=YPC_4803 NC_017266.1 Protein Homology CDS 36451 36909 . - 0 ID=cds4202;Parent=gene4306;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_017266.1 RefSeq gene 36919 37042 . - . ID=gene4307;Name=YPC_RS22095;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPC_RS22095 NC_017266.1 cmsearch ncRNA 36919 37042 . - . ID=rna98;Parent=gene4307;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_017266.1 cmsearch exon 36919 37042 . - . ID=id390;Parent=rna98;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_017266.1 RefSeq gene 37118 37687 . - . ID=gene4308;Name=YPC_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21625;old_locus_tag=YPC_4805 NC_017266.1 Protein Homology CDS 37118 37687 . - 0 ID=cds4203;Parent=gene4308;Dbxref=Genbank:WP_002214145.1;Name=WP_002214145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214145.1;transl_table=11 NC_017266.1 RefSeq gene 37700 38446 . - . ID=gene4309;Name=YPC_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21630;old_locus_tag=YPC_4806 NC_017266.1 Protein Homology CDS 37700 38446 . - 0 ID=cds4204;Parent=gene4309;Dbxref=Genbank:WP_002213303.1;Name=WP_002213303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213303.1;transl_table=11 NC_017266.1 RefSeq gene 38436 40352 . - . ID=gene4310;Name=YPC_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21635;old_locus_tag=YPC_4808 NC_017266.1 Protein Homology CDS 38436 40352 . - 0 ID=cds4205;Parent=gene4310;Dbxref=Genbank:WP_002214148.1;Name=WP_002214148.1;gbkey=CDS;product=exonuclease;protein_id=WP_002214148.1;transl_table=11 NC_017266.1 RefSeq gene 40361 40585 . - . ID=gene4311;Name=YPC_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21640;old_locus_tag=YPC_4809 NC_017266.1 Protein Homology CDS 40361 40585 . - 0 ID=cds4206;Parent=gene4311;Dbxref=Genbank:WP_002228794.1;Name=WP_002228794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228794.1;transl_table=11 NC_017266.1 RefSeq gene 40582 41667 . - . ID=gene4312;Name=YPC_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21645;old_locus_tag=YPC_4810 NC_017266.1 Protein Homology CDS 40582 41667 . - 0 ID=cds4207;Parent=gene4312;Dbxref=Genbank:WP_002213300.1;Name=WP_002213300.1;gbkey=CDS;product=exonuclease;protein_id=WP_002213300.1;transl_table=11 NC_017266.1 RefSeq gene 41816 42004 . + . ID=gene4313;Name=YPC_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21650 NC_017266.1 Protein Homology CDS 41816 42004 . + 0 ID=cds4208;Parent=gene4313;Dbxref=Genbank:WP_002214154.1;Name=WP_002214154.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214154.1;transl_table=11 NC_017266.1 RefSeq gene 42083 43105 . + . ID=gene4314;Name=YPC_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21655;old_locus_tag=YPC_4812 NC_017266.1 Protein Homology CDS 42083 43105 . + 0 ID=cds4209;Parent=gene4314;Dbxref=Genbank:WP_002213298.1;Name=WP_002213298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213298.1;transl_table=11 NC_017266.1 RefSeq gene 43243 43389 . - . ID=gene4315;Name=YPC_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21660;old_locus_tag=YPC_4813 NC_017266.1 Protein Homology CDS 43243 43389 . - 0 ID=cds4210;Parent=gene4315;Dbxref=Genbank:WP_002214158.1;Name=WP_002214158.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214158.1;transl_table=11 NC_017266.1 RefSeq gene 43465 44109 . - . ID=gene4316;Name=YPC_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21665;old_locus_tag=YPC_4814 NC_017266.1 Protein Homology CDS 43465 44109 . - 0 ID=cds4211;Parent=gene4316;Dbxref=Genbank:WP_002214160.1;Name=WP_002214160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214160.1;transl_table=11 NC_017266.1 RefSeq gene 44854 45918 . + . ID=gene4317;Name=YPC_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21670;old_locus_tag=YPC_4815 NC_017266.1 Protein Homology CDS 44854 45918 . + 0 ID=cds4212;Parent=gene4317;Dbxref=Genbank:WP_002214164.1;Name=WP_002214164.1;gbkey=CDS;product=replication protein RepA;protein_id=WP_002214164.1;transl_table=11 NC_017266.1 RefSeq gene 46487 46699 . - . ID=gene4318;Name=YPC_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21675;old_locus_tag=YPC_4816 NC_017266.1 Protein Homology CDS 46487 46699 . - 0 ID=cds4213;Parent=gene4318;Dbxref=Genbank:WP_002222711.1;Name=WP_002222711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222711.1;transl_table=11 NC_017266.1 RefSeq gene 46699 47034 . - . ID=gene4319;Name=YPC_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21680;old_locus_tag=YPC_4817 NC_017266.1 Protein Homology CDS 46699 47034 . - 0 ID=cds4214;Parent=gene4319;Dbxref=Genbank:WP_002227818.1;Name=WP_002227818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227818.1;transl_table=11 NC_017266.1 RefSeq gene 47031 47210 . - . ID=gene4320;Name=YPC_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21685;old_locus_tag=YPC_4818 NC_017266.1 Protein Homology CDS 47031 47210 . - 0 ID=cds4215;Parent=gene4320;Dbxref=Genbank:WP_002228796.1;Name=WP_002228796.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228796.1;transl_table=11 NC_017266.1 RefSeq gene 47251 47526 . - . ID=gene4321;Name=YPC_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21690;old_locus_tag=YPC_4819 NC_017266.1 Protein Homology CDS 47251 47526 . - 0 ID=cds4216;Parent=gene4321;Dbxref=Genbank:WP_002228797.1;Name=WP_002228797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228797.1;transl_table=11 NC_017266.1 RefSeq gene 47594 48004 . - . ID=gene4322;Name=YPC_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21695;old_locus_tag=YPC_4820 NC_017266.1 Protein Homology CDS 47594 48004 . - 0 ID=cds4217;Parent=gene4322;Dbxref=Genbank:WP_002222869.1;Name=WP_002222869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222869.1;transl_table=11 NC_017266.1 RefSeq gene 47988 48359 . - . ID=gene4323;Name=YPC_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21700;old_locus_tag=YPC_4821 NC_017266.1 Protein Homology CDS 47988 48359 . - 0 ID=cds4218;Parent=gene4323;Dbxref=Genbank:WP_002222868.1;Name=WP_002222868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222868.1;transl_table=11 NC_017266.1 RefSeq gene 48513 49343 . - . ID=gene4324;Name=YPC_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21705;old_locus_tag=YPC_4822 NC_017266.1 Protein Homology CDS 48513 49343 . - 0 ID=cds4219;Parent=gene4324;Dbxref=Genbank:WP_002222866.1;Name=WP_002222866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222866.1;transl_table=11 NC_017266.1 RefSeq gene 49347 49547 . - . ID=gene4325;Name=YPC_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21710;old_locus_tag=YPC_4823 NC_017266.1 Protein Homology CDS 49347 49547 . - 0 ID=cds4220;Parent=gene4325;Dbxref=Genbank:WP_002213439.1;Name=WP_002213439.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213439.1;transl_table=11 NC_017266.1 RefSeq gene 49638 50714 . - . ID=gene4326;Name=YPC_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21715;old_locus_tag=YPC_4824 NC_017266.1 Protein Homology CDS 49638 50714 . - 0 ID=cds4221;Parent=gene4326;Dbxref=Genbank:WP_002213437.1;Name=WP_002213437.1;gbkey=CDS;product=recombinase;protein_id=WP_002213437.1;transl_table=11 NC_017266.1 RefSeq gene 50717 50983 . - . ID=gene4327;Name=YPC_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21720;old_locus_tag=YPC_4825 NC_017266.1 Protein Homology CDS 50717 50983 . - 0 ID=cds4222;Parent=gene4327;Dbxref=Genbank:WP_000920226.1;Name=WP_000920226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000920226.1;transl_table=11 NC_017266.1 RefSeq gene 50983 51927 . - . ID=gene4328;Name=YPC_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21725;old_locus_tag=YPC_4826 NC_017266.1 Protein Homology CDS 50983 51927 . - 0 ID=cds4223;Parent=gene4328;Dbxref=Genbank:WP_002225551.1;Name=WP_002225551.1;gbkey=CDS;product=exonuclease;protein_id=WP_002225551.1;transl_table=11 NC_017266.1 RefSeq gene 51988 53016 . - . ID=gene4329;Name=YPC_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21730;old_locus_tag=YPC_4827 NC_017266.1 Protein Homology CDS 51988 53016 . - 0 ID=cds4224;Parent=gene4329;Dbxref=Genbank:WP_002213132.1;Name=WP_002213132.1;gbkey=CDS;product=regulator;protein_id=WP_002213132.1;transl_table=11 NC_017266.1 RefSeq gene 53136 53567 . - . ID=gene4330;Name=YPC_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21735;old_locus_tag=YPC_4828 NC_017266.1 Protein Homology CDS 53136 53567 . - 0 ID=cds4225;Parent=gene4330;Dbxref=Genbank:WP_011114024.1;Name=WP_011114024.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011114024.1;transl_table=11 NC_017266.1 RefSeq gene 53788 54039 . + . ID=gene4331;Name=YPC_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21740 NC_017266.1 Protein Homology CDS 53788 54039 . + 0 ID=cds4226;Parent=gene4331;Dbxref=Genbank:WP_002215095.1;Name=WP_002215095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215095.1;transl_table=11 NC_017266.1 RefSeq gene 54112 54675 . + . ID=gene4332;Name=YPC_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21745;old_locus_tag=YPC_4829 NC_017266.1 Protein Homology CDS 54112 54675 . + 0 ID=cds4227;Parent=gene4332;Dbxref=Genbank:WP_002213141.1;Name=WP_002213141.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002213141.1;transl_table=11 NC_017266.1 RefSeq gene 54705 55148 . - . ID=gene4333;Name=YPC_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21750;old_locus_tag=YPC_4830 NC_017266.1 Protein Homology CDS 54705 55148 . - 0 ID=cds4228;Parent=gene4333;Dbxref=Genbank:WP_002213143.1;Name=WP_002213143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213143.1;transl_table=11 NC_017266.1 RefSeq gene 55145 58669 . - . ID=gene4334;Name=YPC_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21755;old_locus_tag=YPC_4831 NC_017266.1 Protein Homology CDS 55145 58669 . - 0 ID=cds4229;Parent=gene4334;Dbxref=Genbank:WP_002221186.1;Name=WP_002221186.1;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=WP_002221186.1;transl_table=11 NC_017266.1 RefSeq gene 58850 60085 . - . ID=gene4335;Name=YPC_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21760;old_locus_tag=YPC_4832 NC_017266.1 Protein Homology CDS 58850 60085 . - 0 ID=cds4230;Parent=gene4335;Dbxref=Genbank:WP_002211767.1;Name=WP_002211767.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211767.1;transl_table=11 NC_017266.1 RefSeq gene 60182 62548 . - . ID=gene4336;Name=YPC_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21765;old_locus_tag=YPC_4833 NC_017266.1 Protein Homology CDS 60182 62548 . - 0 ID=cds4231;Parent=gene4336;Dbxref=Genbank:WP_002211766.1;Name=WP_002211766.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211766.1;transl_table=11 NC_017266.1 RefSeq gene 62658 62870 . - . ID=gene4337;Name=YPC_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21770;old_locus_tag=YPC_4834 NC_017266.1 Protein Homology CDS 62658 62870 . - 0 ID=cds4232;Parent=gene4337;Dbxref=Genbank:WP_002228800.1;Name=WP_002228800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228800.1;transl_table=11 NC_017266.1 RefSeq gene 63133 63519 . + . ID=gene4338;Name=YPC_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21775;old_locus_tag=YPC_4836 NC_017266.1 Protein Homology CDS 63133 63519 . + 0 ID=cds4233;Parent=gene4338;Dbxref=Genbank:WP_002228802.1;Name=WP_002228802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228802.1;transl_table=11 NC_017266.1 RefSeq gene 63514 64617 . - . ID=gene4339;Name=YPC_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21780;old_locus_tag=YPC_4837 NC_017266.1 Protein Homology CDS 63514 64617 . - 0 ID=cds4234;Parent=gene4339;Dbxref=Genbank:WP_002353208.1;Name=WP_002353208.1;gbkey=CDS;product=integrase;protein_id=WP_002353208.1;transl_table=11 NC_017266.1 RefSeq gene 65377 65889 . - . ID=gene4340;Name=YPC_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21785;old_locus_tag=YPC_4838 NC_017266.1 Protein Homology CDS 65377 65889 . - 0 ID=cds4235;Parent=gene4340;Dbxref=Genbank:WP_002216410.1;Name=WP_002216410.1;gbkey=CDS;product=F1 capsule antigen;protein_id=WP_002216410.1;transl_table=11 NC_017266.1 RefSeq gene 65970 68471 . - . ID=gene4341;Name=YPC_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21790;old_locus_tag=YPC_4839 NC_017266.1 Protein Homology CDS 65970 68471 . - 0 ID=cds4236;Parent=gene4341;Dbxref=Genbank:WP_002211763.1;Name=WP_002211763.1;gbkey=CDS;product=F1 capsule-anchoring protein;protein_id=WP_002211763.1;transl_table=11 NC_017266.1 RefSeq gene 68496 69272 . - . ID=gene4342;Name=YPC_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21795;old_locus_tag=YPC_4840 NC_017266.1 Protein Homology CDS 68496 69272 . - 0 ID=cds4237;Parent=gene4342;Dbxref=Genbank:WP_002211762.1;Name=WP_002211762.1;gbkey=CDS;product=chaperone protein caf1M;protein_id=WP_002211762.1;transl_table=11 NC_017266.1 RefSeq gene 69600 70505 . + . ID=gene4343;Name=YPC_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21800;old_locus_tag=YPC_4841 NC_017266.1 Protein Homology CDS 69600 70505 . + 0 ID=cds4238;Parent=gene4343;Dbxref=Genbank:WP_002211761.1;Name=WP_002211761.1;gbkey=CDS;product=F1 operon positive regulatory protein;protein_id=WP_002211761.1;transl_table=11 NC_017266.1 RefSeq gene 71020 71325 . - . ID=gene4344;Name=YPC_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21805;old_locus_tag=YPC_4842 NC_017266.1 Protein Homology CDS 71020 71325 . - 0 ID=cds4239;Parent=gene4344;Dbxref=Genbank:WP_002224363.1;Name=WP_002224363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224363.1;transl_table=11 NC_017266.1 RefSeq gene 71471 71686 . - . ID=gene4345;Name=YPC_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21810;old_locus_tag=YPC_4844 NC_017266.1 Protein Homology CDS 71471 71686 . - 0 ID=cds4240;Parent=gene4345;Dbxref=Genbank:WP_002224361.1;Name=WP_002224361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224361.1;transl_table=11 NC_017266.1 RefSeq gene 71846 72883 . - . ID=gene4346;Name=YPC_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21815;old_locus_tag=YPC_4846 NC_017266.1 Protein Homology CDS 71846 72883 . - 0 ID=cds4241;Parent=gene4346;Dbxref=Genbank:WP_002233024.1;Name=WP_002233024.1;gbkey=CDS;product=DNA ligase;protein_id=WP_002233024.1;transl_table=11 NC_017266.1 RefSeq repeat_region 72893 74846 . + . ID=id391;gbkey=repeat_region NC_017266.1 RefSeq gene 72959 73738 . - . ID=gene4347;Name=YPC_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21820;old_locus_tag=YPC_4847 NC_017266.1 Protein Homology CDS 72959 73738 . - 0 ID=cds4242;Parent=gene4347;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017266.1 RefSeq gene 73738 74760 . - . ID=gene4348;Name=YPC_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21825;old_locus_tag=YPC_4848 NC_017266.1 Protein Homology CDS 73738 74760 . - 0 ID=cds4243;Parent=gene4348;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_017266.1 RefSeq gene 74884 76893 . - . ID=gene4349;Name=YPC_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21830;old_locus_tag=YPC_4849 NC_017266.1 Protein Homology CDS 74884 76893 . - 0 ID=cds4244;Parent=gene4349;Dbxref=Genbank:WP_002211744.1;Name=WP_002211744.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211744.1;transl_table=11 NC_017266.1 RefSeq gene 76966 77196 . - . ID=gene4350;Name=YPC_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21835;old_locus_tag=YPC_4850 NC_017266.1 Protein Homology CDS 76966 77196 . - 0 ID=cds4245;Parent=gene4350;Dbxref=Genbank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211745.1;transl_table=11 NC_017266.1 RefSeq gene 77909 78415 . - . ID=gene4351;Name=YPC_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21840;old_locus_tag=YPC_4851 NC_017266.1 Protein Homology CDS 77909 78415 . - 0 ID=cds4246;Parent=gene4351;Dbxref=Genbank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_002211746.1;transl_table=11 NC_017266.1 RefSeq gene 78814 79593 . - . ID=gene4352;Name=YPC_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21845;old_locus_tag=YPC_4852 NC_017266.1 Protein Homology CDS 78814 79593 . - 0 ID=cds4247;Parent=gene4352;Dbxref=Genbank:WP_002211747.1;Name=WP_002211747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211747.1;transl_table=11 NC_017266.1 RefSeq gene 79647 80066 . - . ID=gene4353;Name=YPC_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21850;old_locus_tag=YPC_4853 NC_017266.1 Protein Homology CDS 79647 80066 . - 0 ID=cds4248;Parent=gene4353;Dbxref=Genbank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215082.1;transl_table=11 NC_017266.1 RefSeq gene 80077 80298 . - . ID=gene4354;Name=YPC_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21855;old_locus_tag=YPC_4854 NC_017266.1 Protein Homology CDS 80077 80298 . - 0 ID=cds4249;Parent=gene4354;Dbxref=Genbank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211748.1;transl_table=11 NC_017266.1 RefSeq gene 80298 80975 . - . ID=gene4355;Name=YPC_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21860;old_locus_tag=YPC_4855 NC_017266.1 Protein Homology CDS 80298 80975 . - 0 ID=cds4250;Parent=gene4355;Dbxref=Genbank:WP_002211749.1;Name=WP_002211749.1;gbkey=CDS;product=methylase;protein_id=WP_002211749.1;transl_table=11 NC_017266.1 RefSeq gene 81476 81676 . + . ID=gene4356;Name=YPC_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21865 NC_017266.1 Protein Homology CDS 81476 81676 . + 0 ID=cds4251;Parent=gene4356;Dbxref=Genbank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11 NC_017266.1 RefSeq gene 81838 83235 . - . ID=gene4357;Name=YPC_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21870;old_locus_tag=YPC_4857 NC_017266.1 Protein Homology CDS 81838 83235 . - 0 ID=cds4252;Parent=gene4357;Dbxref=Genbank:WP_002228775.1;Name=WP_002228775.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228775.1;transl_table=11 NC_017266.1 RefSeq gene 83614 84585 . - . ID=gene4358;Name=YPC_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21875;old_locus_tag=YPC_4860 NC_017266.1 Protein Homology CDS 83614 84585 . - 0 ID=cds4253;Parent=gene4358;Dbxref=Genbank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002215070.1;transl_table=11 NC_017266.1 RefSeq gene 84582 85787 . - . ID=gene4359;Name=YPC_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21880;old_locus_tag=YPC_4861 NC_017266.1 Protein Homology CDS 84582 85787 . - 0 ID=cds4254;Parent=gene4359;Dbxref=Genbank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002211752.1;transl_table=11 NC_017266.1 RefSeq gene 86089 86316 . + . ID=gene4360;Name=YPC_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21885;old_locus_tag=YPC_4862 NC_017266.1 Protein Homology CDS 86089 86316 . + 0 ID=cds4255;Parent=gene4360;Dbxref=Genbank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;product=prevent-host-death protein;protein_id=WP_002211753.1;transl_table=11 NC_017266.1 RefSeq gene 86316 86642 . + . ID=gene4361;Name=YPC_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21890;old_locus_tag=YPC_4863 NC_017266.1 Protein Homology CDS 86316 86642 . + 0 ID=cds4256;Parent=gene4361;Dbxref=Genbank:WP_002215068.1;Name=WP_002215068.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002215068.1;transl_table=11 NC_017266.1 RefSeq gene 86842 87462 . + . ID=gene4362;Name=YPC_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21895;old_locus_tag=YPC_4864 NC_017266.1 Protein Homology CDS 86842 87462 . + 0 ID=cds4257;Parent=gene4362;Dbxref=Genbank:WP_002211754.1;Name=WP_002211754.1;gbkey=CDS;product=serine recombinase;protein_id=WP_002211754.1;transl_table=11 NC_017266.1 RefSeq gene 87528 88469 . + . ID=gene4363;Name=YPC_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21900;old_locus_tag=YPC_4865 NC_017266.1 Protein Homology CDS 87528 88469 . + 0 ID=cds4258;Parent=gene4363;Dbxref=Genbank:WP_002215065.1;Name=WP_002215065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215065.1;transl_table=11 NC_017266.1 RefSeq gene 88492 88767 . - . ID=gene4364;Name=YPC_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21905;old_locus_tag=YPC_4866 NC_017266.1 Protein Homology CDS 88492 88767 . - 0 ID=cds4259;Parent=gene4364;Dbxref=Genbank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11 NC_017266.1 RefSeq gene 89506 89994 . + . ID=gene4365;Name=YPC_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21910;old_locus_tag=YPC_4867 NC_017266.1 Protein Homology CDS 89506 89994 . + 0 ID=cds4260;Parent=gene4365;Dbxref=Genbank:WP_002211757.1;Name=WP_002211757.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211757.1;transl_table=11 NC_017266.1 RefSeq gene 90072 91835 . + . ID=gene4366;Name=YPC_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21915;old_locus_tag=YPC_4869 NC_017266.1 Protein Homology CDS 90072 91835 . + 0 ID=cds4261;Parent=gene4366;Dbxref=Genbank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211758.1;transl_table=11 NC_017266.1 RefSeq gene 92080 92535 . - . ID=gene4367;Name=YPC_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21920;old_locus_tag=YPC_4870 NC_017266.1 Protein Homology CDS 92080 92535 . - 0 ID=cds4262;Parent=gene4367;Dbxref=Genbank:WP_002353217.1;Name=WP_002353217.1;gbkey=CDS;product=reverse transcriptase;protein_id=WP_002353217.1;transl_table=11 NC_017266.1 RefSeq gene 92621 92929 . + . ID=gene4368;Name=YPC_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21925;old_locus_tag=YPC_4871 NC_017266.1 Protein Homology CDS 92621 92929 . + 0 ID=cds4263;Parent=gene4368;Dbxref=Genbank:WP_002228773.1;Name=WP_002228773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228773.1;transl_table=11 NC_017266.1 RefSeq gene 92844 93215 . + . ID=gene4369;Name=YPC_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21930;old_locus_tag=YPC_4872 NC_017266.1 Protein Homology CDS 92844 93215 . + 0 ID=cds4264;Parent=gene4369;Dbxref=Genbank:WP_002228772.1;Name=WP_002228772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228772.1;transl_table=11 NC_017266.1 RefSeq gene 93395 93712 . + . ID=gene4370;Name=YPC_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21935;old_locus_tag=YPC_4873 NC_017266.1 Protein Homology CDS 93395 93712 . + 0 ID=cds4265;Parent=gene4370;Dbxref=Genbank:WP_002216421.1;Name=WP_002216421.1;gbkey=CDS;product=transposase;protein_id=WP_002216421.1;transl_table=11 NC_017266.1 RefSeq region 93652 95016 . - . ID=id392;Dbxref=ASAP:BBE-0004993,ASAP:BBE-0004993 ERIC;Note=IS1618.1;gbkey=mobile_element NC_017266.1 RefSeq gene 93911 94933 . - . ID=gene4371;Name=YPC_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21940;old_locus_tag=YPC_4874 NC_017266.1 Protein Homology CDS 93911 94933 . - 0 ID=cds4266;Parent=gene4371;Dbxref=Genbank:WP_014501255.1;Name=WP_014501255.1;gbkey=CDS;product=transposase;protein_id=WP_014501255.1;transl_table=11 NC_017266.1 RefSeq gene 95093 95272 . - . ID=gene4372;Name=YPC_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21945 NC_017266.1 Protein Homology CDS 95093 95272 . - 0 ID=cds4267;Parent=gene4372;Dbxref=Genbank:WP_002216419.1;Name=WP_002216419.1;gbkey=CDS;product=DNA helicase;protein_id=WP_002216419.1;transl_table=11 NC_017266.1 RefSeq gene 95402 96610 . - . ID=gene4373;Name=YPC_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21950;old_locus_tag=YPC_4875 NC_017266.1 Protein Homology CDS 95402 96610 . - 0 ID=cds4268;Parent=gene4373;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_017266.1 RefSeq gene 96644 97366 . - . ID=gene4374;Name=YPC_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21955;old_locus_tag=YPC_4876 NC_017266.1 Protein Homology CDS 96644 97366 . - 0 ID=cds4269;Parent=gene4374;Dbxref=Genbank:WP_002224263.1;Name=WP_002224263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224263.1;transl_table=11 NC_017266.1 RefSeq gene 97619 98413 . + . ID=gene4375;Name=YPC_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21960;old_locus_tag=YPC_4877 NC_017266.1 Protein Homology CDS 97619 98413 . + 0 ID=cds4270;Parent=gene4375;Dbxref=Genbank:WP_002224265.1;Name=WP_002224265.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224265.1;transl_table=11 NC_017266.1 RefSeq gene 98714 98971 . + . ID=gene4376;Name=YPC_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21965 NC_017266.1 Protein Homology CDS 98714 98971 . + 0 ID=cds4271;Parent=gene4376;Dbxref=Genbank:WP_002224267.1;Name=WP_002224267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224267.1;transl_table=11 ##sequence-region NC_017264.1 1 9600 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=547048 NC_017264.1 RefSeq region 1 9600 . + . ID=id393;Dbxref=taxon:547048;Is_circular=true;Name=pPCP;biovar=Medievalis;country=China;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=pPCP;strain=Harbin 35;sub-species=pestis NC_017264.1 RefSeq gene 87 997 . + . ID=gene4377;Name=YPC_RS21975;end_range=997,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPC_RS21975;old_locus_tag=YPC_4879;partial=true;pseudo=true NC_017264.1 Protein Homology CDS 87 997 . + 0 ID=cds4272;Parent=gene4377;end_range=997,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NC_017264.1 RefSeq gene 1099 1878 . + . ID=gene4378;Name=YPC_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21980;old_locus_tag=YPC_4881 NC_017264.1 Protein Homology CDS 1099 1878 . + 0 ID=cds4273;Parent=gene4378;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_017264.1 RefSeq gene 2915 3109 . + . ID=gene4379;Name=YPC_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21985;old_locus_tag=YPC_4882 NC_017264.1 Protein Homology CDS 2915 3109 . + 0 ID=cds4274;Parent=gene4379;Dbxref=Genbank:WP_002213433.1;Name=WP_002213433.1;gbkey=CDS;product=rop protein;protein_id=WP_002213433.1;transl_table=11 NC_017264.1 RefSeq gene 4345 4770 . + . ID=gene4380;Name=YPC_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21990;old_locus_tag=YPC_4884 NC_017264.1 Protein Homology CDS 4345 4770 . + 0 ID=cds4275;Parent=gene4380;Dbxref=Genbank:WP_002218512.1;Name=WP_002218512.1;gbkey=CDS;product=pesticin immunity protein;protein_id=WP_002218512.1;transl_table=11 NC_017264.1 RefSeq gene 4805 5878 . - . ID=gene4381;Name=YPC_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS21995;old_locus_tag=YPC_4885 NC_017264.1 Protein Homology CDS 4805 5878 . - 0 ID=cds4276;Parent=gene4381;Dbxref=Genbank:WP_002218509.1;Name=WP_002218509.1;gbkey=CDS;product=peptidase;protein_id=WP_002218509.1;transl_table=11 NC_017264.1 RefSeq gene 6107 6412 . + . ID=gene4382;Name=YPC_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22000 NC_017264.1 Protein Homology CDS 6107 6412 . + 0 ID=cds4277;Parent=gene4382;Dbxref=Genbank:WP_002221218.1;Name=WP_002221218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221218.1;transl_table=11 NC_017264.1 RefSeq gene 6655 7593 . + . ID=gene4383;Name=YPC_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22005;old_locus_tag=YPC_4887 NC_017264.1 Protein Homology CDS 6655 7593 . + 0 ID=cds4278;Parent=gene4383;Dbxref=Genbank:WP_002218234.1;Name=WP_002218234.1;gbkey=CDS;product=coagulase/fibrinolysin;protein_id=WP_002218234.1;transl_table=11 NC_017264.1 RefSeq gene 7780 8079 . - . ID=gene4384;Name=YPC_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22010;old_locus_tag=YPC_4888 NC_017264.1 Protein Homology CDS 7780 8079 . - 0 ID=cds4279;Parent=gene4384;Dbxref=Genbank:WP_002213446.1;Name=WP_002213446.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213446.1;transl_table=11 NC_017264.1 RefSeq gene 8079 8420 . - . ID=gene4385;Name=YPC_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22015;old_locus_tag=YPC_4889 NC_017264.1 Protein Homology CDS 8079 8420 . - 0 ID=cds4280;Parent=gene4385;Dbxref=Genbank:WP_002225538.1;Name=WP_002225538.1;gbkey=CDS;product=toxin RelE;protein_id=WP_002225538.1;transl_table=11 NC_017264.1 RefSeq gene 9123 9338 . - . ID=gene4386;Name=YPC_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPC_RS22020 NC_017264.1 Protein Homology CDS 9123 9338 . - 0 ID=cds4281;Parent=gene4386;Dbxref=Genbank:WP_002213461.1;Name=WP_002213461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213461.1;transl_table=11 ###