YP_RS00005 IPR001094 Flavodoxin YP_RS00005 IPR008254 Flavodoxin/nitric oxide synthase YP_RS00005 IPR029039 Flavoprotein-like YP_RS00010 IPR000485 AsnC-type HTH domain YP_RS00010 IPR011008 Dimeric alpha-beta barrel YP_RS00010 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00010 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YP_RS00010 IPR019887 Transcription regulator AsnC-type, C-terminal YP_RS00010 IPR019888 Transcription regulator AsnC-type YP_RS00015 IPR004618 Aspartate--ammonia ligase YP_RS00020 IPR002035 von Willebrand factor, type A YP_RS00020 IPR008912 Uncharacterised protein family CoxE-like YP_RS00020 IPR023481 Uncharacterised protein family ViaA YP_RS00025 IPR003593 AAA+ ATPase domain YP_RS00025 IPR011704 ATPase, dynein-related, AAA domain YP_RS00025 IPR022547 ATPase, RavA, C-terminal YP_RS00025 IPR023671 ATPase RavA YP_RS00025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00030 IPR003855 K+ potassium transporter YP_RS00030 IPR023051 Potassium uptake protein, low affinity, Kup YP_RS00035 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YP_RS00035 IPR023064 D-ribose pyranase YP_RS00035 IPR023750 RbsD-like domain YP_RS00040 IPR002139 Ribokinase YP_RS00040 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YP_RS00040 IPR011611 Carbohydrate kinase PfkB YP_RS00040 IPR011877 Ribokinase, bacterial YP_RS00040 IPR029056 Ribokinase-like YP_RS00050 IPR004638 Drug resistance transporter EmrB/QacA subfamily YP_RS00050 IPR011701 Major facilitator superfamily YP_RS00050 IPR020846 Major facilitator superfamily domain YP_RS00055 IPR000524 Transcription regulator HTH, GntR YP_RS00055 IPR008920 Transcription regulator FadR/GntR, C-terminal YP_RS00055 IPR011711 GntR, C-terminal YP_RS00055 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00085 IPR001207 Transposase, mutator type YP_RS00090 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YP_RS00090 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00095 IPR013482 Molybdenum cofactor guanylyltransferase YP_RS00095 IPR025877 MobA-like NTP transferase domain YP_RS00095 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS00100 IPR009383 Protein of unknown function DUF1040 YP_RS00105 IPR002575 Aminoglycoside phosphotransferase YP_RS00105 IPR011009 Protein kinase-like domain YP_RS00105 IPR032882 YP_RS00105 YP_RS00110 IPR001853 DSBA-like thioredoxin domain YP_RS00110 IPR012336 Thioredoxin-like fold YP_RS00110 IPR017937 Thioredoxin, conserved site YP_RS00110 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YP_RS00115 IPR001098 DNA-directed DNA polymerase, family A, palm domain YP_RS00115 IPR002298 DNA polymerase A YP_RS00115 IPR002421 5'-3' exonuclease, N-terminal YP_RS00115 IPR002562 3'-5' exonuclease domain YP_RS00115 IPR008918 Helix-hairpin-helix motif, class 2 YP_RS00115 IPR012337 Ribonuclease H-like domain YP_RS00115 IPR018320 DNA polymerase 1 YP_RS00115 IPR019760 DNA-directed DNA polymerase, family A, conserved site YP_RS00115 IPR020045 5'-3' exonuclease, C-terminal domain YP_RS00115 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YP_RS00115 IPR029060 PIN domain-like YP_RS00125 IPR002686 Transposase IS200-like YP_RS00130 IPR006073 GTP binding domain YP_RS00130 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YP_RS00130 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00135 IPR007336 Der GTPase activator YP_RS00140 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN YP_RS00140 IPR006638 Elongator protein 3/MiaB/NifB YP_RS00140 IPR007197 Radical SAM YP_RS00140 IPR010723 HemN, C-terminal domain YP_RS00140 IPR023404 Radical SAM, alpha/beta horseshoe YP_RS00145 IPR001789 Signal transduction response regulator, receiver domain YP_RS00145 IPR002078 RNA polymerase sigma factor 54 interaction domain YP_RS00145 IPR002197 DNA binding HTH domain, Fis-type YP_RS00145 IPR003593 AAA+ ATPase domain YP_RS00145 IPR009057 Homeodomain-like YP_RS00145 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) YP_RS00145 IPR011006 CheY-like superfamily YP_RS00145 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YP_RS00145 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YP_RS00145 IPR025944 Sigma-54 interaction domain, conserved site YP_RS00145 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00150 IPR000014 PAS domain YP_RS00150 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS00150 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS00150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS00150 IPR013767 PAS fold YP_RS00155 IPR001637 Glutamine synthetase class-I, adenylation site YP_RS00155 IPR004809 Glutamine synthetase type I YP_RS00155 IPR008146 Glutamine synthetase, catalytic domain YP_RS00155 IPR008147 Glutamine synthetase, beta-Grasp YP_RS00155 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YP_RS00155 IPR027302 Glutamine synthetase, N-terminal conserved site YP_RS00155 IPR027303 Glutamine synthetase, glycine-rich site YP_RS00165 IPR000640 Translation elongation factor EFG, V domain YP_RS00165 IPR000795 Elongation factor, GTP-binding domain YP_RS00165 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YP_RS00165 IPR005225 Small GTP-binding protein domain YP_RS00165 IPR006298 GTP-binding protein TypA YP_RS00165 IPR009000 Translation protein, beta-barrel domain YP_RS00165 IPR009022 Elongation factor G, III-V domain YP_RS00165 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00165 IPR031157 YP_RS00165 YP_RS00170 IPR006439 HAD hydrolase, subfamily IA YP_RS00170 IPR023198 Phosphoglycolate phosphatase, domain 2 YP_RS00170 IPR023214 HAD-like domain YP_RS00175 IPR017039 Virulence factor BrkB YP_RS00175 IPR023679 Uncharacterised protein family UPF0761, bacterial YP_RS00180 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase YP_RS00180 IPR023509 D-Tyr tRNAtyr deacylase-like domain YP_RS00185 IPR001270 ClpA/B family YP_RS00185 IPR002611 IstB-like ATP-binding protein YP_RS00185 IPR003593 AAA+ ATPase domain YP_RS00185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00185 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS00190 IPR001584 Integrase, catalytic core YP_RS00190 IPR006120 Resolvase, HTH domain YP_RS00190 IPR009057 Homeodomain-like YP_RS00190 IPR012337 Ribonuclease H-like domain YP_RS00195 IPR000182 GNAT domain YP_RS00195 IPR012660 Thioesterase, putative YP_RS00195 IPR016181 Acyl-CoA N-acyltransferase YP_RS00195 IPR029069 HotDog domain YP_RS00205 IPR006042 Xanthine/uracil permease YP_RS00205 IPR006043 Xanthine/uracil/vitamin C permease YP_RS00205 IPR017588 Xanthine permease YP_RS00210 IPR004445 Sodium/glutamate symporter YP_RS00215 IPR001650 Helicase, C-terminal YP_RS00215 IPR004609 ATP-dependent DNA helicase RecG YP_RS00215 IPR011545 DEAD/DEAH box helicase domain YP_RS00215 IPR012340 Nucleic acid-binding, OB-fold YP_RS00215 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS00215 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00215 IPR033454 YP_RS00215 YP_RS00220 IPR001537 tRNA/rRNA methyltransferase, SpoU type YP_RS00220 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YP_RS00220 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS00220 IPR029028 Alpha/beta knot methyltransferases YP_RS00225 IPR002912 ACT domain YP_RS00225 IPR003607 HD/PDEase domain YP_RS00225 IPR004095 TGS YP_RS00225 IPR004811 RelA/SpoT family YP_RS00225 IPR007685 RelA/SpoT YP_RS00225 IPR012675 Beta-grasp domain YP_RS00225 IPR012676 TGS-like YP_RS00230 IPR003716 DNA-directed RNA polymerase, omega subunit YP_RS00230 IPR006110 RNA polymerase, subunit omega/K/RPB6 YP_RS00230 IPR012293 RNA polymerase subunit, RPB6/omega YP_RS00235 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YP_RS00235 IPR017665 Guanylate kinase YP_RS00235 IPR020590 Guanylate kinase, conserved site YP_RS00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00240 IPR004150 NAD-dependent DNA ligase, OB-fold YP_RS00240 IPR010994 RuvA domain 2-like YP_RS00240 IPR012340 Nucleic acid-binding, OB-fold YP_RS00240 IPR013839 NAD-dependent DNA ligase, adenylation YP_RS00240 IPR013840 NAD-dependent DNA ligase, N-terminal YP_RS00240 IPR020923 DNA ligase B YP_RS00245 IPR005115 Uncharacterised domain UPF0126 YP_RS00250 IPR005229 Conserved hypothetical protein CHP00255 YP_RS00250 IPR013527 YicC-like, N-terminal YP_RS00250 IPR013551 Domain of unknown function DUF1732 YP_RS00255 IPR001247 Exoribonuclease, phosphorolytic domain 1 YP_RS00255 IPR002381 Ribonuclease phosphorolytic, bacterial-type YP_RS00255 IPR015847 Exoribonuclease, phosphorolytic domain 2 YP_RS00255 IPR018336 Ribonuclease PH, conserved site YP_RS00255 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS00255 IPR027408 PNPase/RNase PH domain YP_RS00260 IPR000836 Phosphoribosyltransferase domain YP_RS00260 IPR004467 Orotate phosphoribosyl transferase domain YP_RS00260 IPR023031 Orotate phosphoribosyltransferase YP_RS00260 IPR029057 Phosphoribosyltransferase-like YP_RS00265 IPR001647 DNA-binding HTH domain, TetR-type YP_RS00265 IPR009057 Homeodomain-like YP_RS00265 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YP_RS00265 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS00265 IPR023769 Nucleoid occlusion factor SlmA YP_RS00265 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YP_RS00270 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase YP_RS00270 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YP_RS00270 IPR029054 dUTPase-like YP_RS00275 IPR003382 Flavoprotein YP_RS00275 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YP_RS00275 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YP_RS00280 IPR001405 RadC protein YP_RS00280 IPR010994 RuvA domain 2-like YP_RS00280 IPR020891 Uncharacterised protein family UPF0758, conserved site YP_RS00280 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YP_RS00280 IPR025657 RadC-like JAB domain YP_RS00285 IPR001383 Ribosomal protein L28 YP_RS00285 IPR026569 Ribosomal protein L28/L24 YP_RS00290 IPR001705 Ribosomal protein L33 YP_RS00290 IPR011332 Zinc-binding ribosomal protein YP_RS00290 IPR018264 Ribosomal protein L33, conserved site YP_RS00295 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YP_RS00295 IPR010979 Ribosomal protein S13-like, H2TH YP_RS00295 IPR012319 DNA glycosylase/AP lyase, catalytic domain YP_RS00295 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YP_RS00295 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YP_RS00295 IPR020629 Formamidopyrimidine-DNA glycosylase YP_RS00300 IPR001980 Coenzyme A biosynthesis protein YP_RS00300 IPR004821 Cytidyltransferase-like domain YP_RS00300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS00305 IPR001173 Glycosyltransferase 2-like YP_RS00305 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS00310 IPR001296 Glycosyl transferase, family 1 YP_RS00310 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YP_RS00315 IPR002201 Glycosyl transferase, family 9 YP_RS00315 IPR011908 Lipopolysaccharide heptosyltransferase I YP_RS00320 IPR002201 Glycosyl transferase, family 9 YP_RS00320 IPR011910 Lipopolysaccharide heptosyltransferase II YP_RS00325 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS00325 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YP_RS00325 IPR016040 NAD(P)-binding domain YP_RS00330 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YP_RS00330 IPR004839 Aminotransferase, class I/classII YP_RS00330 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YP_RS00330 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS00330 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS00330 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS00335 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YP_RS00335 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YP_RS00335 IPR004627 L-threonine 3-dehydrogenase YP_RS00335 IPR011032 GroES (chaperonin 10)-like YP_RS00335 IPR013149 Alcohol dehydrogenase, C-terminal YP_RS00335 IPR013154 Alcohol dehydrogenase GroES-like YP_RS00335 IPR016040 NAD(P)-binding domain YP_RS00335 IPR020843 Polyketide synthase, enoylreductase YP_RS00345 IPR011055 Duplicated hybrid motif YP_RS00345 IPR016047 Peptidase M23 YP_RS00350 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YP_RS00350 IPR006124 Metalloenzyme YP_RS00350 IPR011258 BPG-independent PGAM, N-terminal YP_RS00350 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS00350 IPR017850 Alkaline-phosphatase-like, core domain YP_RS00355 IPR001763 Rhodanese-like domain YP_RS00360 IPR002109 Glutaredoxin YP_RS00360 IPR011767 Glutaredoxin active site YP_RS00360 IPR011900 Glutaredoxin, GrxC YP_RS00360 IPR012336 Thioredoxin-like fold YP_RS00360 IPR014025 Glutaredoxin subgroup YP_RS00365 IPR003708 Bacterial protein export chaperone SecB YP_RS00370 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YP_RS00370 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YP_RS00370 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS00370 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YP_RS00370 IPR013328 Dehydrogenase, multihelical YP_RS00370 IPR016040 NAD(P)-binding domain YP_RS00370 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS00380 IPR001451 Bacterial transferase hexapeptide repeat YP_RS00380 IPR005881 Serine O-acetyltransferase YP_RS00380 IPR010493 Serine acetyltransferase, N-terminal YP_RS00380 IPR011004 Trimeric LpxA-like YP_RS00380 IPR018357 Hexapeptide transferase, conserved site YP_RS00385 IPR001537 tRNA/rRNA methyltransferase, SpoU type YP_RS00385 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YP_RS00385 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS00385 IPR029028 Alpha/beta knot methyltransferases YP_RS00390 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YP_RS00390 IPR004026 Ada DNA repair, metal-binding YP_RS00390 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YP_RS00390 IPR009057 Homeodomain-like YP_RS00390 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00390 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_RS00390 IPR016221 Bifunctional regulatory protein Ada YP_RS00390 IPR018060 DNA binding HTH domain, AraC-type YP_RS00395 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS00395 IPR003660 HAMP linker domain YP_RS00395 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS00395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS00395 IPR032404 YP_RS00395 YP_RS00400 IPR001789 Signal transduction response regulator, receiver domain YP_RS00400 IPR001867 Signal transduction response regulator, C-terminal YP_RS00400 IPR011006 CheY-like superfamily YP_RS00400 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00405 IPR012899 LTXXQ motif family protein YP_RS00410 IPR006842 Transposase (putative), YhgA-like YP_RS00410 IPR010106 Conserved hypothetical protein CHP01784 YP_RS00415 IPR002524 Cation efflux protein YP_RS00415 IPR023783 Cation efflux pump FieF YP_RS00415 IPR027469 Cation efflux protein transmembrane domain YP_RS00415 IPR027470 Cation efflux protein cytoplasmic domain YP_RS00420 IPR000023 Phosphofructokinase domain YP_RS00420 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type YP_RS00420 IPR012828 6-phosphofructokinase YP_RS00420 IPR015912 Phosphofructokinase, conserved site YP_RS00420 IPR022953 Phosphofructokinase YP_RS00425 IPR000957 Sulphate/thiosulphate-binding, conserved site YP_RS00425 IPR005669 Thiosulphate/Sulfate-binding protein YP_RS00435 IPR001898 Sodium/sulphate symporter YP_RS00435 IPR030676 YP_RS00435 YP_RS00440 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YP_RS00445 IPR001270 ClpA/B family YP_RS00445 IPR002611 IstB-like ATP-binding protein YP_RS00445 IPR003593 AAA+ ATPase domain YP_RS00445 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00445 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS00450 IPR001584 Integrase, catalytic core YP_RS00450 IPR006120 Resolvase, HTH domain YP_RS00450 IPR009057 Homeodomain-like YP_RS00450 IPR012337 Ribonuclease H-like domain YP_RS00455 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YP_RS00460 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YP_RS00460 IPR024078 Putative deacetylase LmbE-like domain YP_RS00465 IPR000847 Transcription regulator HTH, LysR YP_RS00465 IPR005119 LysR, substrate-binding YP_RS00465 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00470 IPR000652 Triosephosphate isomerase YP_RS00470 IPR013785 Aldolase-type TIM barrel YP_RS00470 IPR020861 Triosephosphate isomerase, active site YP_RS00470 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YP_RS00475 IPR009918 Protein of unknown function DUF1454 YP_RS00480 IPR008523 Lactobacillus phage LBR48, DUF805 YP_RS00485 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS00485 IPR008333 Oxidoreductase, FAD-binding domain YP_RS00485 IPR017938 Riboflavin synthase-like beta-barrel YP_RS00490 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YP_RS00495 IPR000577 YP_RS00495 YP_RS00495 IPR005999 Glycerol kinase YP_RS00495 IPR018483 Carbohydrate kinase, FGGY, conserved site YP_RS00495 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS00495 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS00500 IPR000425 Major intrinsic protein YP_RS00500 IPR022357 Major intrinsic protein, conserved site YP_RS00500 IPR023271 Aquaporin-like YP_RS00515 IPR009252 Cell division protein ZapB YP_RS00520 IPR002686 Transposase IS200-like YP_RS00525 IPR003439 ABC transporter-like YP_RS00525 IPR003593 AAA+ ATPase domain YP_RS00525 IPR005074 Peptidase C39, bacteriocin processing YP_RS00525 IPR011527 ABC transporter type 1, transmembrane domain YP_RS00525 IPR017871 ABC transporter, conserved site YP_RS00525 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00530 IPR003997 RTX secretion protein D, Gram-negative bacteria YP_RS00530 IPR006144 Secretion protein HlyD, conserved site YP_RS00530 IPR011053 Single hybrid motif YP_RS00545 IPR025326 Protein of unknown function DUF4232 YP_RS00550 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YP_RS00550 IPR010203 Regulator of ribonuclease activity A YP_RS00550 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YP_RS00555 IPR000537 UbiA prenyltransferase family YP_RS00555 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_RS00555 IPR026046 UbiA prenyltransferase domain containing protein 1 YP_RS00560 IPR003593 AAA+ ATPase domain YP_RS00560 IPR003959 ATPase, AAA-type, core YP_RS00560 IPR004491 Heat shock protein HslU YP_RS00560 IPR019489 Clp ATPase, C-terminal YP_RS00560 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00565 IPR001353 Proteasome, subunit alpha/beta YP_RS00565 IPR022281 ATP-dependent protease, HslV subunit YP_RS00565 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS00570 IPR007730 Sporulation-related domain YP_RS00570 IPR011930 Cell division protein FtsN YP_RS00575 IPR000843 Transcription regulator HTH, LacI YP_RS00575 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS00575 IPR028082 Periplasmic binding protein-like I YP_RS00585 IPR001650 Helicase, C-terminal YP_RS00585 IPR005259 Primosomal protein n YP_RS00585 IPR011545 DEAD/DEAH box helicase domain YP_RS00585 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS00585 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00590 IPR002150 Ribosomal protein L31 YP_RS00590 IPR027491 Ribosomal protein L31 type A YP_RS00595 IPR008024 YiaAB two helix YP_RS00605 IPR002084 Methionine repressor MetJ YP_RS00605 IPR010985 Ribbon-helix-helix YP_RS00605 IPR023453 Methionine repressor MetJ domain YP_RS00610 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_RS00610 IPR011821 O-succinylhomoserine (thiol)-lyase YP_RS00610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS00610 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS00610 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS00615 IPR001048 Aspartate/glutamate/uridylate kinase YP_RS00615 IPR001341 Aspartate kinase domain YP_RS00615 IPR001342 Homoserine dehydrogenase, catalytic YP_RS00615 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YP_RS00615 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YP_RS00615 IPR016040 NAD(P)-binding domain YP_RS00615 IPR018042 Aspartate kinase, conserved site YP_RS00615 IPR019811 Homoserine dehydrogenase, conserved site YP_RS00620 IPR003171 Methylenetetrahydrofolate reductase YP_RS00620 IPR004620 5,10-methylenetetrahydrofolate reductase YP_RS00620 IPR029041 FAD-linked oxidoreductase-like YP_RS00625 IPR001584 Integrase, catalytic core YP_RS00625 IPR012337 Ribonuclease H-like domain YP_RS00625 IPR025948 HTH-like domain YP_RS00630 IPR009057 Homeodomain-like YP_RS00630 IPR010921 Trp repressor/replication initiator YP_RS00630 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00635 IPR001034 HTH DeoR N-terminal domain YP_RS00635 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00635 IPR014036 DeoR C-terminal sensor domain YP_RS00635 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YP_RS00640 IPR002610 Peptidase S54, rhomboid YP_RS00640 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YP_RS00640 IPR022764 Peptidase S54, rhomboid domain YP_RS00640 IPR023662 Rhomboid protease GlpG YP_RS00645 IPR001763 Rhodanese-like domain YP_RS00645 IPR023695 Thiosulfate sulfurtransferase, bacterial YP_RS00650 IPR000792 Transcription regulator LuxR, C-terminal YP_RS00650 IPR011990 Tetratricopeptide-like helical domain YP_RS00650 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00650 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS00650 IPR023768 Transcriptional regulator HTH-type, MalT YP_RS00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00655 IPR000811 Glycosyl transferase, family 35 YP_RS00660 IPR000811 Glycosyl transferase, family 35 YP_RS00660 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YP_RS00665 IPR003385 Glycoside hydrolase, family 77 YP_RS00665 IPR013781 Glycoside hydrolase, catalytic domain YP_RS00665 IPR017853 Glycoside hydrolase, superfamily YP_RS00670 IPR000361 FeS cluster biogenesis YP_RS00670 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YP_RS00670 IPR017726 Fe/S biogenesis protein NfuA YP_RS00675 IPR000836 Phosphoribosyltransferase domain YP_RS00675 IPR029057 Phosphoribosyltransferase-like YP_RS00680 IPR000073 Alpha/beta hydrolase fold-1 YP_RS00680 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase YP_RS00680 IPR029058 Alpha/Beta hydrolase fold YP_RS00685 IPR010854 Domain of unknown function DUF1471 YP_RS00685 IPR025543 Dodecin-like YP_RS00690 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00690 IPR015102 Transcriptional regulator HTH-type, FeoC YP_RS00690 IPR023732 Ferrous iron transport protein C YP_RS00695 IPR003373 Ferrous iron transport protein B YP_RS00695 IPR005225 Small GTP-binding protein domain YP_RS00695 IPR011619 Ferrous iron transport protein B, N-terminal YP_RS00695 IPR011640 Ferrous iron transport protein B, C-terminal YP_RS00695 IPR011642 Nucleoside recognition Gate YP_RS00695 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00700 IPR007167 Ferrous iron transporter FeoA domain YP_RS00700 IPR008988 Transcriptional repressor, C-terminal YP_RS00710 IPR003029 Ribosomal protein S1, RNA-binding domain YP_RS00710 IPR006641 YqgF/RNase H-like domain YP_RS00710 IPR010994 RuvA domain 2-like YP_RS00710 IPR012337 Ribonuclease H-like domain YP_RS00710 IPR012340 Nucleic acid-binding, OB-fold YP_RS00710 IPR018974 Tex-like protein, N-terminal YP_RS00710 IPR022967 RNA-binding domain, S1 YP_RS00710 IPR023097 Tex RuvX-like domain YP_RS00710 IPR023319 Tex-like protein, HTH domain YP_RS00710 IPR023323 Tex-like domain YP_RS00710 IPR032639 YP_RS00710 YP_RS00715 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YP_RS00715 IPR006358 Transcription elongation factor GreB YP_RS00715 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YP_RS00715 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YP_RS00715 IPR023459 Transcription elongation factor GreA/GreB family YP_RS00715 IPR028624 Transcription elongation factor GreA/GreB YP_RS00720 IPR001789 Signal transduction response regulator, receiver domain YP_RS00720 IPR001867 Signal transduction response regulator, C-terminal YP_RS00720 IPR011006 CheY-like superfamily YP_RS00720 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00720 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS00725 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS00725 IPR003660 HAMP linker domain YP_RS00725 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS00725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS00730 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YP_RS00730 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YP_RS00730 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YP_RS00730 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YP_RS00735 IPR000397 Heat shock protein Hsp33 YP_RS00735 IPR016153 Heat shock protein Hsp33, N-terminal YP_RS00735 IPR016154 Heat shock protein Hsp33, C-terminal YP_RS00735 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain YP_RS00740 IPR002942 RNA-binding S4 domain YP_RS00740 IPR025708 Heat shock protein 15 YP_RS00745 IPR006439 HAD hydrolase, subfamily IA YP_RS00745 IPR023214 HAD-like domain YP_RS00750 IPR010771 Intracellular growth attenuator IgaA YP_RS00760 IPR000086 NUDIX hydrolase domain YP_RS00760 IPR015797 NUDIX hydrolase domain-like YP_RS00760 IPR020084 NUDIX hydrolase, conserved site YP_RS00765 IPR001264 Glycosyl transferase, family 51 YP_RS00765 IPR001460 Penicillin-binding protein, transpeptidase YP_RS00765 IPR012338 Beta-lactamase/transpeptidase-like YP_RS00765 IPR012340 Nucleic acid-binding, OB-fold YP_RS00765 IPR023346 Lysozyme-like domain YP_RS00765 IPR031376 YP_RS00765 YP_RS00770 IPR005883 Type IV pilus assembly protein PilM YP_RS00775 IPR007813 Fimbrial assembly PilN YP_RS00785 IPR019684 Protein of unknown function DUF2531 YP_RS00795 IPR001775 GspD/PilQ family YP_RS00795 IPR004846 Type II/III secretion system YP_RS00795 IPR005644 NolW-like YP_RS00795 IPR013355 Type IV pilus secretin PilQ YP_RS00800 IPR000623 Shikimate kinase/Threonine synthase-like 1 YP_RS00800 IPR023000 Shikimate kinase, conserved site YP_RS00800 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00800 IPR031322 YP_RS00800 YP_RS00805 IPR016037 3-dehydroquinate synthase AroB YP_RS00805 IPR030960 YP_RS00805 YP_RS00805 IPR030963 YP_RS00805 YP_RS00810 IPR007730 Sporulation-related domain YP_RS00810 IPR032899 YP_RS00810 YP_RS00815 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS00815 IPR012263 Adenine modification methylase, M.EcoRV-type YP_RS00815 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YP_RS00815 IPR023095 Adenine-specific methyltransferase, domain 2 YP_RS00815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS00820 IPR000056 Ribulose-phosphate 3-epimerase-like YP_RS00820 IPR011060 Ribulose-phosphate binding barrel YP_RS00820 IPR013785 Aldolase-type TIM barrel YP_RS00820 IPR026019 Ribulose-phosphate 3-epimerase YP_RS00825 IPR006346 2-phosphoglycolate phosphatase, prokaryotic YP_RS00825 IPR006439 HAD hydrolase, subfamily IA YP_RS00825 IPR023198 Phosphoglycolate phosphatase, domain 2 YP_RS00825 IPR023214 HAD-like domain YP_RS00830 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS00830 IPR002305 Aminoacyl-tRNA synthetase, class Ic YP_RS00830 IPR002306 Tryptophan-tRNA ligase YP_RS00830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS00830 IPR024109 Tryptophan-tRNA ligase, bacterial-type YP_RS00835 IPR000878 Tetrapyrrole methylase YP_RS00835 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YP_RS00835 IPR006366 Uroporphyrin-III C-methyltransferase YP_RS00835 IPR006367 Sirohaem synthase, N-terminal YP_RS00835 IPR012409 Sirohaem synthase YP_RS00835 IPR014776 Tetrapyrrole methylase, subdomain 2 YP_RS00835 IPR014777 Tetrapyrrole methylase, subdomain 1 YP_RS00835 IPR016040 NAD(P)-binding domain YP_RS00835 IPR019478 Sirohaem synthase, dimerisation domain YP_RS00835 IPR028281 Siroheme synthase, central domain YP_RS00840 IPR000292 Formate/nitrite transporter YP_RS00840 IPR023271 Aquaporin-like YP_RS00840 IPR024002 Formate/nitrite transporter, conserved site YP_RS00845 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD YP_RS00845 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YP_RS00850 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YP_RS00850 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YP_RS00850 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YP_RS00850 IPR007419 BFD-like [2Fe-2S]-binding domain YP_RS00850 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YP_RS00850 IPR017121 Nitrite reductase [NAD(P)H], large subunit YP_RS00850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS00855 IPR011059 Metal-dependent hydrolase, composite domain YP_RS00855 IPR013108 Amidohydrolase 3 YP_RS00855 IPR032466 YP_RS00855 YP_RS00860 IPR011701 Major facilitator superfamily YP_RS00860 IPR020846 Major facilitator superfamily domain YP_RS00860 IPR023528 Major facilitator superfamily transporter, TsgA YP_RS00865 IPR000531 TonB-dependent receptor, beta-barrel YP_RS00865 IPR010100 TonB-dependent copper receptor YP_RS00865 IPR012910 TonB-dependent receptor, plug YP_RS00870 IPR000843 Transcription regulator HTH, LacI YP_RS00870 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS00870 IPR028082 Periplasmic binding protein-like I YP_RS00880 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YP_RS00880 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YP_RS00880 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YP_RS00880 IPR029000 Cyclophilin-like domain YP_RS00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00885 IPR033186 YP_RS00885 YP_RS00890 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YP_RS00890 IPR017926 Glutamine amidotransferase YP_RS00890 IPR029062 Class I glutamine amidotransferase-like YP_RS00895 IPR004636 Acetylornithine/Succinylornithine transaminase family YP_RS00895 IPR005814 Aminotransferase class-III YP_RS00895 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS00895 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS00895 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS00895 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YP_RS00900 IPR010020 Integral membrane protein, YccS/YhfK YP_RS00900 IPR032692 YP_RS00900 YP_RS00905 IPR000595 Cyclic nucleotide-binding domain YP_RS00905 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS00905 IPR012318 Helix-turn-helix motif, Crp-type YP_RS00905 IPR014710 RmlC-like jelly roll fold YP_RS00905 IPR018335 Transcription regulator HTH, Crp-type, conserved site YP_RS00905 IPR018488 Cyclic nucleotide-binding, conserved site YP_RS00905 IPR018490 Cyclic nucleotide-binding-like YP_RS00910 IPR003718 OsmC/Ohr family YP_RS00910 IPR015946 K homology domain-like, alpha/beta YP_RS00915 IPR010665 Protein of unknown function DUF1240 YP_RS00920 IPR006082 Phosphoribulokinase YP_RS00920 IPR006083 Phosphoribulokinase/uridine kinase YP_RS00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00925 IPR010648 Uncharacterised protein family UPF0270 YP_RS00930 IPR000073 Alpha/beta hydrolase fold-1 YP_RS00930 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site YP_RS00930 IPR012020 AB-hydrolase YheT, putative YP_RS00930 IPR029058 Alpha/Beta hydrolase fold YP_RS00935 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YP_RS00940 IPR001638 Extracellular solute-binding protein, family 3 YP_RS00940 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YP_RS00940 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA YP_RS00945 IPR003439 ABC transporter-like YP_RS00945 IPR003593 AAA+ ATPase domain YP_RS00945 IPR017871 ABC transporter, conserved site YP_RS00945 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00950 IPR000515 MetI-like domain YP_RS00955 IPR003819 Taurine catabolism dioxygenase TauD/TfdA YP_RS00965 IPR001173 Glycosyltransferase 2-like YP_RS00965 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS00970 IPR003439 ABC transporter-like YP_RS00970 IPR003593 AAA+ ATPase domain YP_RS00970 IPR017871 ABC transporter, conserved site YP_RS00970 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS00970 IPR032781 YP_RS00970 YP_RS00975 IPR003680 Flavodoxin-like fold YP_RS00975 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YP_RS00975 IPR029039 Flavoprotein-like YP_RS00980 IPR003148 Regulator of K+ conductance, N-terminal YP_RS00980 IPR004771 K+/H+ exchanger YP_RS00980 IPR006153 Cation/H+ exchanger YP_RS00980 IPR016040 NAD(P)-binding domain YP_RS00980 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YP_RS00985 IPR012658 Conserved hypothetical protein CHP02443 YP_RS00985 IPR013088 Zinc finger, NHR/GATA-type YP_RS00990 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YP_RS00990 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YP_RS00995 IPR007236 SlyX YP_RS01000 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YP_RS01000 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YP_RS01000 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YP_RS01005 IPR013559 YheO-like YP_RS01010 IPR003787 Sulphur relay, DsrE/F-like protein YP_RS01010 IPR017463 Sulphur relay, TusD/DsrE YP_RS01010 IPR027396 DsrEFH-like YP_RS01015 IPR003787 Sulphur relay, DsrE/F-like protein YP_RS01015 IPR017462 Sulphur relay, TusC/DsrF YP_RS01015 IPR027396 DsrEFH-like YP_RS01020 IPR007215 Sulphur relay, TusB/DsrH YP_RS01020 IPR023526 Sulphur relay, TusB YP_RS01020 IPR027396 DsrEFH-like YP_RS01025 IPR005679 Ribosomal protein S12, bacteria YP_RS01025 IPR006032 Ribosomal protein S12/S23 YP_RS01025 IPR012340 Nucleic acid-binding, OB-fold YP_RS01030 IPR000235 Ribosomal protein S5/S7 YP_RS01030 IPR005717 Ribosomal protein S7, bacterial/organellar-type YP_RS01030 IPR020606 Ribosomal protein S7, conserved site YP_RS01030 IPR023798 Ribosomal protein S7 domain YP_RS01035 IPR000640 Translation elongation factor EFG, V domain YP_RS01035 IPR000795 Elongation factor, GTP-binding domain YP_RS01035 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YP_RS01035 IPR004540 Translation elongation factor EFG/EF2 YP_RS01035 IPR005225 Small GTP-binding protein domain YP_RS01035 IPR005517 Translation elongation factor EFG/EF2, domain IV YP_RS01035 IPR009000 Translation protein, beta-barrel domain YP_RS01035 IPR009022 Elongation factor G, III-V domain YP_RS01035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS01035 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS01035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01035 IPR031157 YP_RS01035 YP_RS01040 IPR000795 Elongation factor, GTP-binding domain YP_RS01040 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YP_RS01040 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YP_RS01040 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YP_RS01040 IPR005225 Small GTP-binding protein domain YP_RS01040 IPR009000 Translation protein, beta-barrel domain YP_RS01040 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YP_RS01040 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01040 IPR031157 YP_RS01040 YP_RS01045 IPR002686 Transposase IS200-like YP_RS01050 IPR007419 BFD-like [2Fe-2S]-binding domain YP_RS01055 IPR002024 Bacterioferritin YP_RS01055 IPR008331 Ferritin/DPS protein domain YP_RS01055 IPR009078 Ferritin-like superfamily YP_RS01055 IPR012347 Ferritin-related YP_RS01060 IPR001848 Ribosomal protein S10 YP_RS01060 IPR018268 Ribosomal protein S10, conserved site YP_RS01060 IPR027486 Ribosomal protein S10 domain YP_RS01065 IPR000597 Ribosomal protein L3 YP_RS01065 IPR009000 Translation protein, beta-barrel domain YP_RS01065 IPR019926 Ribosomal protein L3, conserved site YP_RS01065 IPR019927 Ribosomal protein L3, bacterial/organelle-type YP_RS01070 IPR002136 Ribosomal protein L4/L1e YP_RS01070 IPR013005 Ribosomal protein L4/L1e, bacterial-type YP_RS01070 IPR023574 Ribosomal protein L4 domain YP_RS01075 IPR001014 Ribosomal protein L23/L25, conserved site YP_RS01075 IPR012677 Nucleotide-binding, alpha-beta plait YP_RS01075 IPR012678 Ribosomal protein L23/L15e core domain YP_RS01075 IPR013025 Ribosomal protein L25/L23 YP_RS01080 IPR002171 Ribosomal protein L2 YP_RS01080 IPR005880 Ribosomal protein L2, bacterial/organellar-type YP_RS01080 IPR008991 Translation protein SH3-like domain YP_RS01080 IPR012340 Nucleic acid-binding, OB-fold YP_RS01080 IPR014722 Ribosomal protein L2 domain 2 YP_RS01080 IPR014726 Ribosomal protein L2, domain 3 YP_RS01080 IPR022666 Ribosomal Proteins L2, RNA binding domain YP_RS01080 IPR022669 Ribosomal protein L2, C-terminal YP_RS01080 IPR022671 Ribosomal protein L2, conserved site YP_RS01085 IPR002222 Ribosomal protein S19/S15 YP_RS01085 IPR005732 Ribosomal protein S19, bacterial-type YP_RS01085 IPR020934 Ribosomal protein S19 conserved site YP_RS01085 IPR023575 Ribosomal protein S19, superfamily YP_RS01090 IPR001063 Ribosomal protein L22/L17 YP_RS01090 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YP_RS01090 IPR018260 Ribosomal protein L22/L17, conserved site YP_RS01095 IPR001351 Ribosomal protein S3, C-terminal YP_RS01095 IPR004044 K Homology domain, type 2 YP_RS01095 IPR004087 K Homology domain YP_RS01095 IPR005704 Ribosomal protein S3, bacterial YP_RS01095 IPR009019 K homology domain, prokaryotic type YP_RS01095 IPR015946 K homology domain-like, alpha/beta YP_RS01095 IPR018280 Ribosomal protein S3, conserved site YP_RS01100 IPR000114 Ribosomal protein L16 YP_RS01100 IPR016180 Ribosomal protein L10e/L16 YP_RS01100 IPR020798 Ribosomal protein L16, conserved site YP_RS01105 IPR001854 Ribosomal protein L29 YP_RS01105 IPR018254 Ribosomal protein L29, conserved site YP_RS01110 IPR000266 Ribosomal protein S17 YP_RS01110 IPR012340 Nucleic acid-binding, OB-fold YP_RS01110 IPR019979 Ribosomal protein S17, conserved site YP_RS01110 IPR019984 Ribosomal protein S17, bacterial-type YP_RS01115 IPR000218 Ribosomal protein L14b/L23e YP_RS01115 IPR005745 Ribosomal protein L14, bacterial-type YP_RS01115 IPR019972 Ribosomal protein L14 conserved site YP_RS01120 IPR003256 Ribosomal protein L24 YP_RS01120 IPR005824 KOW YP_RS01120 IPR005825 Ribosomal protein L24/L26, conserved site YP_RS01120 IPR008991 Translation protein SH3-like domain YP_RS01120 IPR014722 Ribosomal protein L2 domain 2 YP_RS01125 IPR002132 Ribosomal protein L5 YP_RS01125 IPR020930 Ribosomal protein L5, bacterial-type YP_RS01125 IPR022803 Ribosomal protein L5 domain YP_RS01125 IPR031309 YP_RS01125 YP_RS01125 IPR031310 YP_RS01125 YP_RS01130 IPR001209 Ribosomal protein S14 YP_RS01130 IPR018271 Ribosomal protein S14, conserved site YP_RS01130 IPR023036 Ribosomal protein S14, bacterial/plastid YP_RS01135 IPR000630 Ribosomal protein S8 YP_RS01140 IPR000702 Ribosomal protein L6 YP_RS01140 IPR002358 Ribosomal protein L6, conserved site YP_RS01140 IPR019906 Ribosomal protein L6, bacterial-type YP_RS01140 IPR020040 Ribosomal protein L6, alpha-beta domain YP_RS01145 IPR004389 Ribosomal protein L18, bacterial-type YP_RS01145 IPR005484 Ribosomal protein L18/L5 YP_RS01150 IPR000851 Ribosomal protein S5 YP_RS01150 IPR005324 Ribosomal protein S5, C-terminal YP_RS01150 IPR005712 Ribosomal protein S5, bacterial-type YP_RS01150 IPR013810 Ribosomal protein S5, N-terminal YP_RS01150 IPR014720 Double-stranded RNA-binding domain YP_RS01150 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS01150 IPR018192 Ribosomal protein S5, N-terminal, conserved site YP_RS01150 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS01155 IPR005996 Ribosomal protein L30, bacterial-type YP_RS01155 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YP_RS01155 IPR018038 Ribosomal protein L30, conserved site YP_RS01160 IPR001196 Ribosomal protein L15, conserved site YP_RS01160 IPR005749 Ribosomal protein L15, bacterial-type YP_RS01160 IPR021131 Ribosomal protein L18e/L15P YP_RS01160 IPR030878 YP_RS01160 YP_RS01165 IPR002208 SecY/SEC61-alpha family YP_RS01165 IPR023201 SecY subunit domain YP_RS01165 IPR026593 Protein translocase subunit SecY YP_RS01165 IPR030659 YP_RS01165 YP_RS01170 IPR000473 Ribosomal protein L36 YP_RS01175 IPR001892 Ribosomal protein S13 YP_RS01175 IPR010979 Ribosomal protein S13-like, H2TH YP_RS01175 IPR018269 Ribosomal protein S13, conserved site YP_RS01175 IPR019980 Ribosomal protein S13, bacterial-type YP_RS01175 IPR027437 30s ribosomal protein S13, C-terminal YP_RS01180 IPR001971 Ribosomal protein S11 YP_RS01180 IPR018102 Ribosomal S11, conserved site YP_RS01180 IPR019981 Ribosomal protein S11, bacterial-type YP_RS01185 IPR001912 Ribosomal protein S4/S9, N-terminal YP_RS01185 IPR002942 RNA-binding S4 domain YP_RS01185 IPR005709 Ribosomal protein S4, bacterial-type YP_RS01185 IPR018079 Ribosomal protein S4, conserved site YP_RS01185 IPR022801 Ribosomal protein S4/S9 YP_RS01190 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain YP_RS01190 IPR011260 RNA polymerase, alpha subunit, C-terminal YP_RS01190 IPR011262 DNA-directed RNA polymerase, insert domain YP_RS01190 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YP_RS01190 IPR011773 DNA-directed RNA polymerase, alpha subunit YP_RS01195 IPR000456 Ribosomal protein L17 YP_RS01200 IPR000551 MerR-type HTH domain YP_RS01200 IPR009061 DNA binding domain, putative YP_RS01200 IPR011788 Zn(II)-responsive transcriptional regulator YP_RS01205 IPR005589 Protein of unknown function DUF331 YP_RS01210 IPR001185 Large-conductance mechanosensitive channel YP_RS01210 IPR019823 Large-conductance mechanosensitive channel, conserved site YP_RS01215 IPR003148 Regulator of K+ conductance, N-terminal YP_RS01215 IPR006036 Potassium uptake protein TrkA YP_RS01215 IPR006037 Regulator of K+ conductance, C-terminal YP_RS01215 IPR016040 NAD(P)-binding domain YP_RS01220 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p YP_RS01220 IPR004573 rRNA small subunit methyltransferase B YP_RS01220 IPR006027 NusB/RsmB/TIM44 YP_RS01220 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YP_RS01220 IPR023267 RNA (C5-cytosine) methyltransferase YP_RS01220 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YP_RS01220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS01225 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YP_RS01225 IPR002376 Formyl transferase, N-terminal YP_RS01225 IPR005793 Formyl transferase, C-terminal YP_RS01225 IPR005794 Methionyl-tRNA formyltransferase YP_RS01225 IPR011034 Formyl transferase, C-terminal-like YP_RS01230 IPR000181 Formylmethionine deformylase YP_RS01230 IPR023635 Peptide deformylase YP_RS01235 IPR003488 DNA recombination-mediator protein A YP_RS01240 IPR007456 Protein of unknown function DUF494 YP_RS01245 IPR000380 DNA topoisomerase, type IA YP_RS01245 IPR013498 DNA topoisomerase, type IA, zn finger YP_RS01250 IPR006070 YrdC-like domain YP_RS01250 IPR017945 DHBP synthase RibB-like alpha/beta domain YP_RS01250 IPR023535 Threonylcarbamoyl-AMP synthase YP_RS01255 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YP_RS01255 IPR011342 Shikimate dehydrogenase YP_RS01255 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YP_RS01255 IPR016040 NAD(P)-binding domain YP_RS01255 IPR022893 Shikimate, quinate/shikimate dehydrogenase YP_RS01260 IPR001451 Bacterial transferase hexapeptide repeat YP_RS01260 IPR011004 Trimeric LpxA-like YP_RS01295 IPR002514 Transposase IS3/IS911family YP_RS01295 IPR009057 Homeodomain-like YP_RS01300 IPR001584 Integrase, catalytic core YP_RS01300 IPR012337 Ribonuclease H-like domain YP_RS01310 IPR001270 ClpA/B family YP_RS01310 IPR002611 IstB-like ATP-binding protein YP_RS01310 IPR003593 AAA+ ATPase domain YP_RS01310 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01310 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS01315 IPR001584 Integrase, catalytic core YP_RS01315 IPR006120 Resolvase, HTH domain YP_RS01315 IPR009057 Homeodomain-like YP_RS01315 IPR012337 Ribonuclease H-like domain YP_RS01320 IPR002686 Transposase IS200-like YP_RS01325 IPR005584 DNA gyrase inhibitor YacG YP_RS01325 IPR013088 Zinc finger, NHR/GATA-type YP_RS01330 IPR009777 Cell division protein ZapD YP_RS01330 IPR027462 Z ring-associated protein D, C-terminal domain YP_RS01335 IPR001977 Dephospho-CoA kinase YP_RS01335 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01345 IPR001093 IMP dehydrogenase/GMP reductase YP_RS01345 IPR005993 Guanosine monophosphate reductase 1 YP_RS01345 IPR013785 Aldolase-type TIM barrel YP_RS01345 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YP_RS01350 IPR001992 Type II secretion system conserved site YP_RS01350 IPR003004 GspF/PilC family YP_RS01350 IPR018076 Type II secretion system F domain YP_RS01355 IPR001482 Type II secretion system protein E YP_RS01355 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01360 IPR012902 Prokaryotic N-terminal methylation site YP_RS01365 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YP_RS01365 IPR004393 Nicotinate-nucleotide pyrophosphorylase YP_RS01365 IPR013785 Aldolase-type TIM barrel YP_RS01365 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YP_RS01365 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YP_RS01370 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YP_RS01375 IPR031347 YP_RS01375 YP_RS01380 IPR002293 Amino acid/polyamine transporter I YP_RS01380 IPR004840 Amino acid permease, conserved site YP_RS01380 IPR004841 Amino acid permease/ SLC12A domain YP_RS01385 IPR000524 Transcription regulator HTH, GntR YP_RS01385 IPR008920 Transcription regulator FadR/GntR, C-terminal YP_RS01385 IPR011711 GntR, C-terminal YP_RS01385 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01390 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type YP_RS01390 IPR005474 Transketolase, N-terminal YP_RS01390 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YP_RS01390 IPR029061 Thiamin diphosphate-binding fold YP_RS01390 IPR033247 YP_RS01390 YP_RS01395 IPR000089 Biotin/lipoyl attachment YP_RS01395 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YP_RS01395 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YP_RS01395 IPR004167 E3 binding YP_RS01395 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YP_RS01395 IPR011053 Single hybrid motif YP_RS01395 IPR023213 Chloramphenicol acetyltransferase-like domain YP_RS01400 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_RS01400 IPR006258 Dihydrolipoamide dehydrogenase YP_RS01400 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YP_RS01400 IPR016156 FAD/NAD-linked reductase, dimerisation domain YP_RS01400 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS01410 IPR002686 Transposase IS200-like YP_RS01415 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_RS01415 IPR004406 Aconitase B, bacterial YP_RS01415 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YP_RS01415 IPR015929 Aconitase B, N-terminal, bacterial YP_RS01415 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YP_RS01415 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YP_RS01415 IPR015933 Aconitase B, HEAT-like, bacterial YP_RS01415 IPR015937 Aconitase/isopropylmalate dehydratase YP_RS01415 IPR018136 Aconitase family, 4Fe-4S cluster binding site YP_RS01420 IPR008249 Uncharacterised protein family UPF0231 YP_RS01425 IPR000620 Drug/metabolite transporter YP_RS01430 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YP_RS01430 IPR009165 S-adenosylmethionine decarboxylase, bacterial YP_RS01430 IPR016067 S-adenosylmethionine decarboxylase, core YP_RS01435 IPR001045 Spermidine/spermine synthases family YP_RS01435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS01435 IPR030373 YP_RS01435 YP_RS01440 IPR019114 Chaperone lipoprotein, PulS/OutS-like YP_RS01445 IPR001117 Multicopper oxidase, type 1 YP_RS01445 IPR002355 Multicopper oxidase, copper-binding site YP_RS01445 IPR008972 Cupredoxin YP_RS01445 IPR011706 Multicopper oxidase, type 2 YP_RS01445 IPR011707 Multicopper oxidase, type 3 YP_RS01445 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YP_RS01450 IPR000836 Phosphoribosyltransferase domain YP_RS01450 IPR005904 Hypoxanthine phosphoribosyl transferase YP_RS01450 IPR029057 Phosphoribosyltransferase-like YP_RS01455 IPR001765 Carbonic anhydrase YP_RS01455 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YP_RS01460 IPR003439 ABC transporter-like YP_RS01460 IPR003593 AAA+ ATPase domain YP_RS01460 IPR017871 ABC transporter, conserved site YP_RS01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01465 IPR000412 ABC-2 transporter YP_RS01465 IPR013525 ABC-2 type transporter YP_RS01475 IPR003190 Aspartate decarboxylase YP_RS01475 IPR009010 Aspartate decarboxylase-like domain YP_RS01480 IPR003721 Pantoate-beta-alanine ligase YP_RS01480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS01485 IPR003700 Ketopantoate hydroxymethyltransferase YP_RS01485 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS01490 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YP_RS01495 IPR002646 Poly A polymerase, head domain YP_RS01495 IPR010206 Poly(A) polymerase I YP_RS01495 IPR025866 Polymerase A arginine-rich C-terminal domain YP_RS01495 IPR032828 YP_RS01495 YP_RS01500 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YP_RS01500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS01500 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YP_RS01500 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YP_RS01505 IPR000962 Zinc finger, DksA/TraR C4-type YP_RS01505 IPR012784 RNA polymerase-binding transcription factor DksA YP_RS01505 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YP_RS01505 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YP_RS01510 IPR005224 Sugar fermentation stimulation protein YP_RS01515 IPR004175 2',5' RNA ligase YP_RS01515 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YP_RS01515 IPR014051 Phosphoesterase, HXTX YP_RS01520 IPR001650 Helicase, C-terminal YP_RS01520 IPR007502 Helicase-associated domain YP_RS01520 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YP_RS01520 IPR011545 DEAD/DEAH box helicase domain YP_RS01520 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal YP_RS01520 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS01520 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01525 IPR001264 Glycosyl transferase, family 51 YP_RS01525 IPR001460 Penicillin-binding protein, transpeptidase YP_RS01525 IPR011813 Penicillin-binding protein 1B YP_RS01525 IPR012338 Beta-lactamase/transpeptidase-like YP_RS01525 IPR023346 Lysozyme-like domain YP_RS01525 IPR028166 Bifunctional transglycosylase second domain YP_RS01525 IPR032730 YP_RS01525 YP_RS01530 IPR003439 ABC transporter-like YP_RS01530 IPR003593 AAA+ ATPase domain YP_RS01530 IPR017871 ABC transporter, conserved site YP_RS01530 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01535 IPR002491 ABC transporter periplasmic binding domain YP_RS01535 IPR008091 Ferrichrome-binding periplasmic protein YP_RS01540 IPR000522 ABC transporter, permease protein YP_RS01540 IPR029022 ABC transporter, BtuC-like YP_RS01545 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YP_RS01545 IPR005814 Aminotransferase class-III YP_RS01545 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS01545 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS01545 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS01550 IPR001807 Chloride channel, voltage gated YP_RS01550 IPR014743 Chloride channel, core YP_RS01550 IPR023861 Chloride channel, ClcA YP_RS01555 IPR000361 FeS cluster biogenesis YP_RS01555 IPR016092 FeS cluster insertion protein YP_RS01555 IPR017870 FeS cluster insertion, C-terminal, conserved site YP_RS01555 IPR023063 Iron-sulfur cluster insertion protein ErpA YP_RS01560 IPR005115 Uncharacterised domain UPF0126 YP_RS01565 IPR002491 ABC transporter periplasmic binding domain YP_RS01565 IPR023544 ABC transporter, vitamin B12-binding protein YP_RS01570 IPR000845 Nucleoside phosphorylase domain YP_RS01570 IPR010049 MTA/SAH nucleosidase YP_RS01570 IPR018017 Nucleoside phosphorylase YP_RS01575 IPR003607 HD/PDEase domain YP_RS01575 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase YP_RS01575 IPR006674 HD domain YP_RS01575 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria YP_RS01575 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain YP_RS01575 IPR026875 Phosphohydrolase-associated domain YP_RS01575 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YP_RS01580 IPR001478 PDZ domain YP_RS01580 IPR001940 Peptidase S1C YP_RS01580 IPR009003 Trypsin-like cysteine/serine peptidase domain YP_RS01580 IPR011782 Peptidase S1C, Do YP_RS01585 IPR001789 Signal transduction response regulator, receiver domain YP_RS01585 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS01585 IPR003660 HAMP linker domain YP_RS01585 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS01585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS01585 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YP_RS01585 IPR011006 CheY-like superfamily YP_RS01585 IPR019247 Histidine kinase BarA, N-terminal YP_RS01590 IPR002912 ACT domain YP_RS01590 IPR003607 HD/PDEase domain YP_RS01590 IPR004095 TGS YP_RS01590 IPR004811 RelA/SpoT family YP_RS01590 IPR007685 RelA/SpoT YP_RS01590 IPR012675 Beta-grasp domain YP_RS01590 IPR012676 TGS-like YP_RS01600 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YP_RS01600 IPR011551 NTP pyrophosphohydrolase MazG, bacterial YP_RS01605 IPR004468 CTP synthase YP_RS01605 IPR017456 CTP synthase, N-terminal YP_RS01605 IPR017926 Glutamine amidotransferase YP_RS01605 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01605 IPR029062 Class I glutamine amidotransferase-like YP_RS01610 IPR000941 Enolase YP_RS01610 IPR020809 Enolase, conserved site YP_RS01610 IPR020810 Enolase, C-terminal YP_RS01610 IPR020811 Enolase, N-terminal YP_RS01610 IPR029017 Enolase N-terminal domain-like YP_RS01610 IPR029065 Enolase C-terminal domain-like YP_RS01615 IPR001424 Superoxide dismutase, copper/zinc binding domain YP_RS01615 IPR018152 Superoxide dismutase, copper/zinc, binding site YP_RS01615 IPR024134 YP_RS01615 YP_RS01620 IPR007197 Radical SAM YP_RS01620 IPR013785 Aldolase-type TIM barrel YP_RS01620 IPR024924 7-carboxy-7-deazaguanine synthase-like YP_RS01620 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YP_RS01625 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YP_RS01630 IPR001094 Flavodoxin YP_RS01630 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS01630 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YP_RS01630 IPR003097 FAD-binding, type 1 YP_RS01630 IPR008254 Flavodoxin/nitric oxide synthase YP_RS01630 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YP_RS01630 IPR017938 Riboflavin synthase-like beta-barrel YP_RS01630 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 YP_RS01630 IPR029039 Flavoprotein-like YP_RS01630 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YP_RS01635 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YP_RS01635 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YP_RS01635 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YP_RS01635 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YP_RS01645 IPR013321 Arc-type ribbon-helix-helix YP_RS01645 IPR031807 YP_RS01645 YP_RS01650 IPR012933 HicA mRNA interferase family YP_RS01665 IPR002500 Phosphoadenosine phosphosulphate reductase YP_RS01665 IPR011784 Sulphate adenylyltransferase, small subunit YP_RS01665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS01670 IPR000795 Elongation factor, GTP-binding domain YP_RS01670 IPR005225 Small GTP-binding protein domain YP_RS01670 IPR009000 Translation protein, beta-barrel domain YP_RS01670 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YP_RS01670 IPR011779 Sulphate adenylyltransferase, large subunit YP_RS01670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01670 IPR031157 YP_RS01670 YP_RS01675 IPR002891 Adenylylsulphate kinase YP_RS01675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01680 IPR022721 Protein of unknown function DUF3561 YP_RS01685 IPR007060 Septum formation initiator FtsL/DivIC YP_RS01685 IPR023081 Cell division protein FtsB YP_RS01690 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_RS01690 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YP_RS01690 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS01695 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_RS01695 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YP_RS01700 IPR001656 Pseudouridine synthase, TruD YP_RS01700 IPR020103 Pseudouridine synthase, catalytic domain YP_RS01700 IPR020119 Pseudouridine synthase TruD, conserved site YP_RS01705 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YP_RS01705 IPR030048 YP_RS01705 YP_RS01710 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_RS01710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS01715 IPR011055 Duplicated hybrid motif YP_RS01715 IPR016047 Peptidase M23 YP_RS01715 IPR018392 LysM domain YP_RS01720 IPR000943 RNA polymerase sigma-70 YP_RS01720 IPR007624 RNA polymerase sigma-70 region 3 YP_RS01720 IPR007627 RNA polymerase sigma-70 region 2 YP_RS01720 IPR007630 RNA polymerase sigma-70 region 4 YP_RS01720 IPR009042 RNA polymerase sigma-70 region 1.2 YP_RS01720 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01720 IPR012761 RNA polymerase sigma factor RpoS YP_RS01720 IPR013324 RNA polymerase sigma factor, region 3/4 YP_RS01720 IPR013325 RNA polymerase sigma factor, region 2 YP_RS01720 IPR014284 RNA polymerase sigma-70 like domain YP_RS01725 IPR000432 DNA mismatch repair protein MutS, C-terminal YP_RS01725 IPR005748 DNA mismatch repair protein MutS, type 1 YP_RS01725 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YP_RS01725 IPR007696 DNA mismatch repair protein MutS, core YP_RS01725 IPR007860 DNA mismatch repair protein MutS, connector domain YP_RS01725 IPR007861 DNA mismatch repair protein MutS, clamp YP_RS01725 IPR016151 DNA mismatch repair protein MutS, N-terminal YP_RS01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01735 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YP_RS01735 IPR004785 Ribose 5-phosphate isomerase B YP_RS01740 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YP_RS01740 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YP_RS01740 IPR011032 GroES (chaperonin 10)-like YP_RS01740 IPR013149 Alcohol dehydrogenase, C-terminal YP_RS01740 IPR013154 Alcohol dehydrogenase GroES-like YP_RS01740 IPR016040 NAD(P)-binding domain YP_RS01740 IPR020843 Polyketide synthase, enoylreductase YP_RS01745 IPR002347 Glucose/ribitol dehydrogenase YP_RS01745 IPR016040 NAD(P)-binding domain YP_RS01745 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS01750 IPR004006 Dak kinase YP_RS01755 IPR004007 DhaL domain YP_RS01755 IPR012737 Dihydroxyacetone kinase, subunit L YP_RS01760 IPR007324 Sugar-binding domain, putative YP_RS01760 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01765 IPR000802 Arsenical pump membrane protein, ArsB YP_RS01770 IPR001845 HTH ArsR-type DNA-binding domain YP_RS01770 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01775 IPR006793 FaeA-like protein YP_RS01775 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01785 IPR001638 Extracellular solute-binding protein, family 3 YP_RS01790 IPR004852 Di-haem cytochrome c peroxidase YP_RS01790 IPR009056 Cytochrome c-like domain YP_RS01790 IPR025992 Haem-binding domain YP_RS01800 IPR000531 TonB-dependent receptor, beta-barrel YP_RS01800 IPR012910 TonB-dependent receptor, plug YP_RS01805 IPR012927 ShET2 enterotoxin, N-terminal YP_RS01810 IPR011004 Trimeric LpxA-like YP_RS01815 IPR000994 Peptidase M24, structural domain YP_RS01815 IPR001714 Peptidase M24, methionine aminopeptidase YP_RS01815 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YP_RS01820 IPR021831 Protein of unknown function DUF3423 YP_RS01825 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YP_RS01825 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YP_RS01825 IPR011167 Iron-dependent fumarate hydratase YP_RS01825 IPR020557 Fumarate lyase, conserved site YP_RS01830 IPR000577 YP_RS01830 YP_RS01830 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS01830 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS01835 IPR004560 L-ribulose-5-phosphate 3-epimerase YP_RS01835 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS01840 IPR001851 ABC transporter, permease YP_RS01845 IPR001851 ABC transporter, permease YP_RS01850 IPR003439 ABC transporter-like YP_RS01850 IPR003593 AAA+ ATPase domain YP_RS01850 IPR017871 ABC transporter, conserved site YP_RS01850 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01855 IPR025997 Periplasmic binding protein domain YP_RS01855 IPR028082 Periplasmic binding protein-like I YP_RS01860 IPR001034 HTH DeoR N-terminal domain YP_RS01860 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01860 IPR014036 DeoR C-terminal sensor domain YP_RS01860 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YP_RS01865 IPR001303 Class II aldolase/adducin N-terminal YP_RS01865 IPR004661 L-ribulose-5-phosphate 4-epimerase YP_RS01870 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YP_RS01870 IPR006656 Molybdopterin oxidoreductase YP_RS01870 IPR006657 Molydopterin dinucleotide-binding domain YP_RS01870 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YP_RS01870 IPR009010 Aspartate decarboxylase-like domain YP_RS01870 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YP_RS01870 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YP_RS01875 IPR014297 Dimethylsulphoxide reductase, chain B YP_RS01875 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS01875 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS01880 IPR007059 DMSO reductase anchor subunit (DmsC) YP_RS01885 IPR020945 DMSO/Nitrate reductase chaperone YP_RS01885 IPR026269 Tat proofreading chaperone DmsD-type YP_RS01885 IPR028611 Tat proofreading chaperone DmsD YP_RS01890 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YP_RS01890 IPR016174 Di-haem cytochrome, transmembrane YP_RS01895 IPR009155 Cytochrome b562 YP_RS01895 IPR010980 Cytochrome c/b562 YP_RS01900 IPR000763 Catalase-peroxidase haem YP_RS01900 IPR002016 Haem peroxidase, plant/fungal/bacterial YP_RS01900 IPR010255 Haem peroxidase YP_RS01900 IPR019793 Peroxidases heam-ligand binding site YP_RS01900 IPR019794 Peroxidase, active site YP_RS01905 IPR025997 Periplasmic binding protein domain YP_RS01905 IPR028082 Periplasmic binding protein-like I YP_RS01910 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YP_RS01915 IPR003439 ABC transporter-like YP_RS01915 IPR003593 AAA+ ATPase domain YP_RS01915 IPR017871 ABC transporter, conserved site YP_RS01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01920 IPR001851 ABC transporter, permease YP_RS01925 IPR005474 Transketolase, N-terminal YP_RS01925 IPR029061 Thiamin diphosphate-binding fold YP_RS01925 IPR033247 YP_RS01925 YP_RS01930 IPR005475 Transketolase-like, pyrimidine-binding domain YP_RS01930 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YP_RS01930 IPR029061 Thiamin diphosphate-binding fold YP_RS01930 IPR033247 YP_RS01930 YP_RS01930 IPR033248 YP_RS01930 YP_RS01935 IPR000577 YP_RS01935 YP_RS01935 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS01935 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS01940 IPR009015 L-fucose isomerase, N-terminal/central domain YP_RS01940 IPR015888 L-fucose isomerase, C-terminal YP_RS01945 IPR000835 MarR-type HTH domain YP_RS01945 IPR007324 Sugar-binding domain, putative YP_RS01945 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01950 IPR011701 Major facilitator superfamily YP_RS01950 IPR020846 Major facilitator superfamily domain YP_RS01955 IPR008136 CinA, C-terminal YP_RS01960 IPR003593 AAA+ ATPase domain YP_RS01960 IPR013765 DNA recombination and repair protein RecA YP_RS01960 IPR020584 DNA recombination/repair protein RecA, conserved site YP_RS01960 IPR023400 DNA recombination and repair protein RecA, C-terminal YP_RS01960 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS01965 IPR003783 Regulatory protein RecX YP_RS01965 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS01970 IPR002318 Alanine-tRNA ligase, class IIc YP_RS01970 IPR003156 DHHA1 domain YP_RS01970 IPR009000 Translation protein, beta-barrel domain YP_RS01970 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YP_RS01970 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain YP_RS01970 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YP_RS01970 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YP_RS01970 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YP_RS01975 IPR003751 Carbon storage regulator YP_RS01995 IPR006439 HAD hydrolase, subfamily IA YP_RS01995 IPR010976 Beta-phosphoglucomutase hydrolase YP_RS01995 IPR023198 Phosphoglycolate phosphatase, domain 2 YP_RS01995 IPR023214 HAD-like domain YP_RS02000 IPR020143 Uncharacterised protein family, RP436 YP_RS02000 IPR032818 YP_RS02000 YP_RS02005 IPR006334 Glutamate--cysteine ligase, monofunctional YP_RS02005 IPR007370 Glutamate--cysteine ligase YP_RS02010 IPR003815 S-ribosylhomocysteinase (LuxS) YP_RS02010 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YP_RS02015 IPR000644 CBS domain YP_RS02015 IPR002550 Domain of unknown function DUF21 YP_RS02015 IPR005170 Transporter-associated domain YP_RS02015 IPR016166 FAD-binding, type 2 YP_RS02015 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS02020 IPR002541 Cytochrome c assembly protein YP_RS02025 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YP_RS02025 IPR003593 AAA+ ATPase domain YP_RS02025 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YP_RS02025 IPR004780 Signal recognition particle protein Ffh YP_RS02025 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YP_RS02025 IPR022941 Signal recognition particle, SRP54 subunit YP_RS02025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02030 IPR000307 Ribosomal protein S16 YP_RS02030 IPR020592 Ribosomal protein S16, conserved site YP_RS02030 IPR023803 Ribosomal protein S16 domain YP_RS02035 IPR002676 RimM protein YP_RS02035 IPR009000 Translation protein, beta-barrel domain YP_RS02035 IPR011033 PRC-barrel-like YP_RS02035 IPR011961 16S rRNA processing protein RimM YP_RS02035 IPR027275 PRC-barrel domain YP_RS02040 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YP_RS02040 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YP_RS02040 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YP_RS02040 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS02040 IPR029028 Alpha/beta knot methyltransferases YP_RS02045 IPR001857 Ribosomal protein L19 YP_RS02045 IPR008991 Translation protein SH3-like domain YP_RS02045 IPR018257 Ribosomal protein L19, conserved site YP_RS02050 IPR007433 Protein of unknown function DUF481 YP_RS02060 IPR001789 Signal transduction response regulator, receiver domain YP_RS02060 IPR007492 LytTR DNA-binding domain YP_RS02060 IPR011006 CheY-like superfamily YP_RS02065 IPR006218 DAHP synthetase I/KDSA YP_RS02065 IPR006219 DHAP synthase, class 1 YP_RS02065 IPR013785 Aldolase-type TIM barrel YP_RS02070 IPR002701 Chorismate mutase YP_RS02070 IPR003099 Prephenate dehydrogenase YP_RS02070 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YP_RS02070 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS02070 IPR011277 Chorismate mutase, T-protein YP_RS02070 IPR016040 NAD(P)-binding domain YP_RS02070 IPR020822 Chorismate mutase, type II YP_RS02075 IPR001086 Prephenate dehydratase YP_RS02075 IPR002701 Chorismate mutase YP_RS02075 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase YP_RS02075 IPR010952 Chorismate mutase, gammaproteobacteria YP_RS02075 IPR018528 Prephenate dehydratase, conserved site YP_RS02075 IPR020822 Chorismate mutase, type II YP_RS02080 IPR001270 ClpA/B family YP_RS02080 IPR002611 IstB-like ATP-binding protein YP_RS02080 IPR003593 AAA+ ATPase domain YP_RS02080 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02080 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS02085 IPR001584 Integrase, catalytic core YP_RS02085 IPR006120 Resolvase, HTH domain YP_RS02085 IPR009057 Homeodomain-like YP_RS02085 IPR012337 Ribonuclease H-like domain YP_RS02090 IPR025890 Abhydrolase, bacterial YP_RS02090 IPR029058 Alpha/Beta hydrolase fold YP_RS02095 IPR001734 Sodium/solute symporter YP_RS02095 IPR014083 Cation/acetate symporter ActP YP_RS02095 IPR018212 Sodium/solute symporter, conserved site YP_RS02100 IPR007436 Protein of unknown function DUF485 YP_RS02105 IPR000873 AMP-dependent synthetase/ligase YP_RS02105 IPR011904 Acetate-CoA ligase YP_RS02105 IPR020845 AMP-binding, conserved site YP_RS02105 IPR025110 AMP-binding enzyme C-terminal domain YP_RS02105 IPR032387 YP_RS02105 YP_RS02110 IPR001991 Sodium:dicarboxylate symporter YP_RS02110 IPR018107 Sodium:dicarboxylate symporter, conserved site YP_RS02110 IPR033380 YP_RS02110 YP_RS02115 IPR000792 Transcription regulator LuxR, C-terminal YP_RS02115 IPR001789 Signal transduction response regulator, receiver domain YP_RS02115 IPR011006 CheY-like superfamily YP_RS02115 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02115 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS02120 IPR001789 Signal transduction response regulator, receiver domain YP_RS02120 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS02120 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS02120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS02120 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YP_RS02120 IPR011006 CheY-like superfamily YP_RS02125 IPR003522 Type III secretion system outer membrane pore YscC/HrcC YP_RS02125 IPR004845 Type II secretion system GspD, conserved site YP_RS02125 IPR004846 Type II/III secretion system YP_RS02125 IPR005644 NolW-like YP_RS02130 IPR012843 Type III secretion system YscD/HrpQ YP_RS02130 IPR032034 YP_RS02130 YP_RS02135 IPR012671 Type III secretion system, secretion protein E YP_RS02140 IPR009057 Homeodomain-like YP_RS02140 IPR018060 DNA binding HTH domain, AraC-type YP_RS02140 IPR020449 Transcription regulator HTH, AraC- type YP_RS02145 IPR011841 Type III secretion system, needle protein YP_RS02145 IPR021123 Type III secretion, needle-protein-like YP_RS02150 IPR010437 Type III secretion system SsaH YP_RS02155 IPR012670 Type III secretion system, YscI/HrpB YP_RS02160 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YP_RS02160 IPR006182 Secretory protein YscJ/FliF YP_RS02165 IPR025292 Type III secretion system protein YP_RS02170 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E YP_RS02170 IPR012842 Type III secretion system HrpE/YscL YP_RS02175 IPR001712 Type III secretion system FHIPEP YP_RS02175 IPR006302 Type III secretion protein HrcV YP_RS02175 IPR025505 FHIPEP conserved site YP_RS02180 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YP_RS02180 IPR003593 AAA+ ATPase domain YP_RS02180 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YP_RS02180 IPR005714 ATPase, type III secretion system, FliI/YscN YP_RS02180 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YP_RS02180 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02195 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YP_RS02195 IPR001543 Surface presentation of antigen (SpoA) YP_RS02195 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YP_RS02200 IPR005773 Yop virulence translocation protein R YP_RS02200 IPR005838 Type III secretion system inner membrane P protein YP_RS02205 IPR002191 Bacterial export protein family 3 YP_RS02205 IPR006306 Type III secretion protein HrpO YP_RS02210 IPR002010 Type III secretion system inner membrane R protein YP_RS02210 IPR006304 Type III secretion protein SpaR/YscT YP_RS02215 IPR006135 Type III secretion system substrate exporter YP_RS02215 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YP_RS02215 IPR029025 Type III secretion system substrate exporter, C-terminal YP_RS02220 IPR007272 Sulphur transport domain YP_RS02225 IPR001455 TusA-like domain YP_RS02230 IPR000847 Transcription regulator HTH, LysR YP_RS02230 IPR005119 LysR, substrate-binding YP_RS02230 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02240 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_RS02240 IPR006233 Cystathionine beta-lyase, bacterial YP_RS02240 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS02240 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS02240 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS02245 IPR003439 ABC transporter-like YP_RS02245 IPR003593 AAA+ ATPase domain YP_RS02245 IPR017871 ABC transporter, conserved site YP_RS02245 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02250 IPR000522 ABC transporter, permease protein YP_RS02250 IPR029022 ABC transporter, BtuC-like YP_RS02255 IPR002491 ABC transporter periplasmic binding domain YP_RS02260 IPR007845 Haemin-degrading HemS/ChuX domain YP_RS02265 IPR000531 TonB-dependent receptor, beta-barrel YP_RS02265 IPR010916 TonB box, conserved site YP_RS02265 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YP_RS02265 IPR011276 TonB-dependent haem/haemoglobin receptor YP_RS02265 IPR012910 TonB-dependent receptor, plug YP_RS02275 IPR016040 NAD(P)-binding domain YP_RS02280 IPR010413 Heme utilization carrier protein HutX like YP_RS02285 IPR006638 Elongator protein 3/MiaB/NifB YP_RS02285 IPR007197 Radical SAM YP_RS02285 IPR023404 Radical SAM, alpha/beta horseshoe YP_RS02285 IPR026332 Putative heme utilization radical SAM enzyme HutW YP_RS02290 IPR001270 ClpA/B family YP_RS02290 IPR002611 IstB-like ATP-binding protein YP_RS02290 IPR003593 AAA+ ATPase domain YP_RS02290 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02290 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS02295 IPR001584 Integrase, catalytic core YP_RS02295 IPR006120 Resolvase, HTH domain YP_RS02295 IPR009057 Homeodomain-like YP_RS02295 IPR012337 Ribonuclease H-like domain YP_RS02300 IPR023404 Radical SAM, alpha/beta horseshoe YP_RS02305 IPR003171 Methylenetetrahydrofolate reductase YP_RS02305 IPR029041 FAD-linked oxidoreductase-like YP_RS02310 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YP_RS02310 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02315 IPR011206 Citrate lyase beta subunit-like YP_RS02315 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS02320 IPR011215 Phosphoribosyl transferase YP_RS02320 IPR028157 PELOTA RNA-binding domain YP_RS02325 IPR023214 HAD-like domain YP_RS02325 IPR024197 Uncharacterised conserved protein UCP030802 YP_RS02330 IPR011214 Uncharacterised conserved protein UCP020967 YP_RS02330 IPR022537 TRSP domain YP_RS02330 IPR029057 Phosphoribosyltransferase-like YP_RS02335 IPR011226 ATP-grasp family YP_RS02335 IPR013816 ATP-grasp fold, subdomain 2 YP_RS02340 IPR003325 TerD domain YP_RS02345 IPR003325 TerD domain YP_RS02345 IPR017115 Tellurite resistance, TerA YP_RS02350 IPR007791 Heat shock protein DnaJ-like protein DjlA YP_RS02350 IPR029024 TerB-like YP_RS02355 IPR005496 Integral membrane protein TerC YP_RS02355 IPR022369 Integral membrane protein TerC, riboswitch-linked YP_RS02360 IPR003325 TerD domain YP_RS02365 IPR003325 TerD domain YP_RS02370 IPR010546 Protein of unknown function DUF1120 YP_RS02375 IPR000015 Outer membrane usher protein YP_RS02375 IPR018030 Fimbrial membrane usher, conserved site YP_RS02375 IPR025885 PapC, N-terminal domain YP_RS02375 IPR025949 PapC-like, C-terminal domain YP_RS02380 IPR008962 PapD-like YP_RS02380 IPR016147 PapD, N-terminal, bacterial YP_RS02380 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS02385 IPR020846 Major facilitator superfamily domain YP_RS02390 IPR007087 Zinc finger, C2H2 YP_RS02400 IPR003610 Carbohydrate-binding module family 5/12 YP_RS02400 IPR003961 Fibronectin, type III YP_RS02400 IPR006094 FAD linked oxidase, N-terminal YP_RS02400 IPR012951 Berberine/berberine-like YP_RS02400 IPR013783 Immunoglobulin-like fold YP_RS02400 IPR016166 FAD-binding, type 2 YP_RS02400 IPR016167 FAD-binding, type 2, subdomain 1 YP_RS02405 IPR005546 Autotransporter beta-domain YP_RS02405 IPR006315 Outer membrane autotransporter barrel YP_RS02405 IPR011050 Pectin lyase fold/virulence factor YP_RS02405 IPR012332 P22 tailspike C-terminal domain-like YP_RS02410 IPR007440 Chorismate--pyruvate lyase YP_RS02410 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YP_RS02415 IPR000537 UbiA prenyltransferase family YP_RS02415 IPR006370 4-hydroxybenzoate polyprenyl transferase YP_RS02415 IPR030470 YP_RS02415 YP_RS02415 IPR031103 YP_RS02415 YP_RS02420 IPR002123 Phospholipid/glycerol acyltransferase YP_RS02420 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YP_RS02420 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YP_RS02425 IPR000829 Diacylglycerol kinase, prokaryotic YP_RS02430 IPR006197 Peptidase S24, LexA-like YP_RS02430 IPR006199 LexA repressor, DNA-binding domain YP_RS02430 IPR006200 LexA repressor YP_RS02430 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02430 IPR015927 Peptidase S24/S26A/S26B/S26C YP_RS02430 IPR019759 Peptidase S24/S26A/S26B YP_RS02430 IPR028360 Peptidase S24/S26, beta-ribbon domain YP_RS02435 IPR002481 Ferric-uptake regulator YP_RS02435 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02440 IPR001269 tRNA-dihydrouridine synthase YP_RS02440 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN YP_RS02440 IPR013785 Aldolase-type TIM barrel YP_RS02440 IPR018517 tRNA-dihydrouridine synthase, conserved site YP_RS02445 IPR014318 Phage shock protein, PspG YP_RS02450 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YP_RS02450 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YP_RS02450 IPR011032 GroES (chaperonin 10)-like YP_RS02450 IPR013149 Alcohol dehydrogenase, C-terminal YP_RS02450 IPR013154 Alcohol dehydrogenase GroES-like YP_RS02450 IPR016040 NAD(P)-binding domain YP_RS02450 IPR020843 Polyketide synthase, enoylreductase YP_RS02455 IPR003593 AAA+ ATPase domain YP_RS02455 IPR007692 DNA helicase, DnaB type YP_RS02455 IPR007693 DNA helicase, DnaB-like, N-terminal YP_RS02455 IPR007694 DNA helicase, DnaB-like, C-terminal YP_RS02455 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YP_RS02455 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02460 IPR000821 Alanine racemase YP_RS02460 IPR001608 Alanine racemase, N-terminal YP_RS02460 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YP_RS02460 IPR011079 Alanine racemase, C-terminal YP_RS02460 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YP_RS02460 IPR029066 PLP-binding barrel YP_RS02465 IPR000796 Aspartate/other aminotransferase YP_RS02465 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YP_RS02465 IPR004839 Aminotransferase, class I/classII YP_RS02465 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS02465 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS02470 IPR007351 Uncharacterised protein YjbR YP_RS02475 IPR003439 ABC transporter-like YP_RS02475 IPR004602 UvrABC system subunit A YP_RS02475 IPR013815 ATP-grasp fold, subdomain 1 YP_RS02475 IPR017871 ABC transporter, conserved site YP_RS02475 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02480 IPR000424 Primosome PriB/single-strand DNA-binding YP_RS02480 IPR011344 Single-stranded DNA-binding protein YP_RS02480 IPR012340 Nucleic acid-binding, OB-fold YP_RS02485 IPR008000 Rhamnose mutarotase YP_RS02485 IPR011008 Dimeric alpha-beta barrel YP_RS02485 IPR013448 L-rhamnose 1-epimerase YP_RS02490 IPR001670 Alcohol dehydrogenase, iron-type YP_RS02490 IPR013460 Lactaldehyde reductase YP_RS02490 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YP_RS02495 IPR001303 Class II aldolase/adducin N-terminal YP_RS02495 IPR013447 Rhamnulose-1-phosphate aldolase YP_RS02500 IPR009308 Rhamnose isomerase YP_RS02500 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS02505 IPR000577 YP_RS02505 YP_RS02505 IPR013449 Rhamnulokinase YP_RS02505 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS02505 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS02520 IPR003313 AraC-type arabinose-binding/dimerisation domain YP_RS02520 IPR009057 Homeodomain-like YP_RS02520 IPR014710 RmlC-like jelly roll fold YP_RS02520 IPR018060 DNA binding HTH domain, AraC-type YP_RS02520 IPR018062 HTH domain AraC-type, conserved site YP_RS02520 IPR020449 Transcription regulator HTH, AraC- type YP_RS02520 IPR023609 Transcription regulator HTH, RhaS YP_RS02525 IPR003313 AraC-type arabinose-binding/dimerisation domain YP_RS02525 IPR009057 Homeodomain-like YP_RS02525 IPR011051 RmlC-like cupin domain YP_RS02525 IPR018060 DNA binding HTH domain, AraC-type YP_RS02525 IPR018062 HTH domain AraC-type, conserved site YP_RS02525 IPR020449 Transcription regulator HTH, AraC- type YP_RS02525 IPR023699 Transcription activator HTH, RhaR YP_RS02530 IPR004673 L-rhamnose-proton symport, RhaT YP_RS02540 IPR008992 Enterotoxin YP_RS02550 IPR004954 Peptidase M60, viral enhancin protein YP_RS02550 IPR031161 YP_RS02550 YP_RS02560 IPR001647 DNA-binding HTH domain, TetR-type YP_RS02560 IPR009057 Homeodomain-like YP_RS02560 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YP_RS02560 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS02565 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YP_RS02565 IPR016040 NAD(P)-binding domain YP_RS02565 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS02565 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS02565 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS02565 IPR028261 Dihydroprymidine dehydrogenase domain II YP_RS02570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS02570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS02575 IPR006478 Formate dehydrogenase, alpha subunit YP_RS02575 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YP_RS02575 IPR006656 Molybdopterin oxidoreductase YP_RS02575 IPR006657 Molydopterin dinucleotide-binding domain YP_RS02575 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YP_RS02575 IPR009010 Aspartate decarboxylase-like domain YP_RS02575 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YP_RS02580 IPR003834 Cytochrome c assembly protein, transmembrane domain YP_RS02580 IPR012336 Thioredoxin-like fold YP_RS02580 IPR017937 Thioredoxin, conserved site YP_RS02580 IPR022910 Thiol:disulphide interchange protein DsbD YP_RS02580 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YP_RS02585 IPR004323 Divalent ion tolerance protein, CutA YP_RS02585 IPR011322 Nitrogen regulatory PII-like, alpha/beta YP_RS02590 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YP_RS02595 IPR000362 Fumarate lyase family YP_RS02595 IPR004708 Aspartate ammonia-lyase YP_RS02595 IPR008948 L-Aspartase-like YP_RS02595 IPR018951 Fumarase C, C-terminal YP_RS02595 IPR020557 Fumarate lyase, conserved site YP_RS02595 IPR022761 Fumarate lyase, N-terminal YP_RS02595 IPR024083 Fumarase/histidase, N-terminal YP_RS02600 IPR007313 FxsA cytoplasmic membrane protein YP_RS02605 IPR011032 GroES (chaperonin 10)-like YP_RS02605 IPR018369 Chaperonin Cpn10, conserved site YP_RS02605 IPR020818 Chaperonin Cpn10 YP_RS02610 IPR001844 Chaperonin Cpn60 YP_RS02610 IPR002423 Chaperonin Cpn60/TCP-1 YP_RS02610 IPR018370 Chaperonin Cpn60, conserved site YP_RS02610 IPR027409 GroEL-like apical domain YP_RS02610 IPR027413 GroEL-like equatorial domain YP_RS02615 IPR025294 Protein of unknown function DUF4156 YP_RS02620 IPR003739 Lysine-2,3-aminomutase family YP_RS02620 IPR007197 Radical SAM YP_RS02620 IPR013785 Aldolase-type TIM barrel YP_RS02620 IPR022462 Lysine-2,3-aminomutase-like YP_RS02625 IPR001059 Translation elongation factor P/YeiP, central YP_RS02625 IPR008991 Translation protein SH3-like domain YP_RS02625 IPR011768 Translation elongation factor P YP_RS02625 IPR012340 Nucleic acid-binding, OB-fold YP_RS02625 IPR013185 Translation elongation factor, KOW-like YP_RS02625 IPR013852 Translation elongation factor P/YeiP, conserved site YP_RS02625 IPR014722 Ribosomal protein L2 domain 2 YP_RS02625 IPR015365 Elongation factor P, C-terminal YP_RS02625 IPR020599 Translation elongation factor P/YeiP YP_RS02630 IPR000390 Small multidrug resistance protein family YP_RS02635 IPR003418 Fumarate reductase, D subunit YP_RS02640 IPR003510 Fumarate reductase, subunit C YP_RS02645 IPR001041 2Fe-2S ferredoxin-type domain YP_RS02645 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YP_RS02645 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YP_RS02645 IPR009051 Alpha-helical ferredoxin YP_RS02645 IPR012675 Beta-grasp domain YP_RS02645 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS02645 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS02645 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YP_RS02650 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YP_RS02650 IPR003953 FAD binding domain YP_RS02650 IPR005884 Fumarate reductase, flavoprotein subunit YP_RS02650 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_RS02650 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YP_RS02650 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS02650 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YP_RS02650 IPR030664 YP_RS02650 YP_RS02660 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YP_RS02660 IPR004525 Elongation factor P--(R)-beta-lysine ligase YP_RS02660 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YP_RS02660 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YP_RS02665 IPR006685 Mechanosensitive ion channel MscS YP_RS02665 IPR006686 Mechanosensitive ion channel MscS, conserved site YP_RS02665 IPR010920 Like-Sm (LSM) domain YP_RS02665 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YP_RS02665 IPR011066 Mechanosensitive ion channel MscS, C-terminal YP_RS02665 IPR024393 Mechanosensitive ion channel MscS, porin domain YP_RS02665 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YP_RS02670 IPR003817 Phosphatidylserine decarboxylase-related YP_RS02670 IPR033177 YP_RS02670 YP_RS02670 IPR033178 YP_RS02670 YP_RS02675 IPR004881 Ribosome biogenesis GTPase RsgA, putative YP_RS02675 IPR010914 EngC GTPase YP_RS02675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02685 IPR012337 Ribonuclease H-like domain YP_RS02685 IPR013520 Exonuclease, RNase T/DNA polymerase III YP_RS02685 IPR022894 Oligoribonuclease YP_RS02700 IPR004453 Epoxyqueuosine reductase QueG YP_RS02700 IPR009051 Alpha-helical ferredoxin YP_RS02700 IPR013542 Domain of unknown function DUF1730 YP_RS02700 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS02705 IPR000631 YjeF C-terminal domain YP_RS02705 IPR004443 YjeF N-terminal domain YP_RS02705 IPR029056 Ribokinase-like YP_RS02705 IPR030677 YP_RS02705 YP_RS02710 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YP_RS02710 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02715 IPR002508 Cell wall hydrolase/autolysin, catalytic YP_RS02715 IPR018392 LysM domain YP_RS02715 IPR021731 AMIN domain YP_RS02720 IPR002099 DNA mismatch repair protein family YP_RS02720 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS02720 IPR013507 DNA mismatch repair protein, C-terminal YP_RS02720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS02720 IPR014762 DNA mismatch repair, conserved site YP_RS02720 IPR014790 MutL, C-terminal, dimerisation YP_RS02720 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS02720 IPR020667 DNA mismatch repair protein, MutL YP_RS02725 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase YP_RS02725 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02730 IPR005001 Host factor Hfq YP_RS02730 IPR010920 Like-Sm (LSM) domain YP_RS02735 IPR006073 GTP binding domain YP_RS02735 IPR009022 Elongation factor G, III-V domain YP_RS02735 IPR016496 GTPase HflX YP_RS02735 IPR025121 GTPase HflX N-terminal domain YP_RS02735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02735 IPR032305 YP_RS02735 YP_RS02740 IPR001107 Band 7 protein YP_RS02740 IPR001972 Stomatin family YP_RS02740 IPR010201 HflK YP_RS02740 IPR020980 Menbrane protein HflK, N-terminal YP_RS02745 IPR001107 Band 7 protein YP_RS02745 IPR001972 Stomatin family YP_RS02745 IPR010200 HflC YP_RS02745 IPR029060 PIN domain-like YP_RS02750 IPR019201 Protein of unknown function DUF2065 YP_RS02755 IPR001114 Adenylosuccinate synthetase YP_RS02755 IPR018220 Adenylosuccinate synthase, active site YP_RS02755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02755 IPR033128 YP_RS02755 YP_RS02760 IPR000944 Transcription regulator Rrf2-like YP_RS02760 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02760 IPR023761 Transcriptional repressor HTH, NsrR YP_RS02760 IPR030489 YP_RS02760 YP_RS02765 IPR003029 Ribosomal protein S1, RNA-binding domain YP_RS02765 IPR004476 Ribonuclease II/ribonuclease R YP_RS02765 IPR011129 Cold shock protein YP_RS02765 IPR011805 Ribonuclease R YP_RS02765 IPR012340 Nucleic acid-binding, OB-fold YP_RS02765 IPR013223 Ribonuclease B, N-terminal OB domain YP_RS02765 IPR013668 Ribonuclease R winged-helix domain YP_RS02765 IPR022967 RNA-binding domain, S1 YP_RS02770 IPR001537 tRNA/rRNA methyltransferase, SpoU type YP_RS02770 IPR004441 RNA methyltransferase TrmH family YP_RS02770 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YP_RS02770 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YP_RS02770 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS02770 IPR029028 Alpha/beta knot methyltransferases YP_RS02770 IPR029064 50S ribosomal protein L30e-like YP_RS02775 IPR006089 Acyl-CoA dehydrogenase, conserved site YP_RS02775 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YP_RS02775 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YP_RS02775 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YP_RS02780 IPR010854 Domain of unknown function DUF1471 YP_RS02780 IPR025543 Dodecin-like YP_RS02785 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YP_RS02785 IPR029058 Alpha/Beta hydrolase fold YP_RS02795 IPR000529 Ribosomal protein S6 YP_RS02795 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YP_RS02795 IPR020814 Ribosomal protein S6, plastid/chloroplast YP_RS02795 IPR020815 Ribosomal protein S6, conserved site YP_RS02800 IPR000424 Primosome PriB/single-strand DNA-binding YP_RS02800 IPR012340 Nucleic acid-binding, OB-fold YP_RS02800 IPR023646 Primosomal replication protein PriB YP_RS02805 IPR001648 Ribosomal protein S18 YP_RS02805 IPR018275 Ribosomal protein S18, conserved site YP_RS02810 IPR000244 Ribosomal protein L9 YP_RS02810 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YP_RS02810 IPR020069 Ribosomal protein L9, C-terminal YP_RS02810 IPR020070 Ribosomal protein L9, N-terminal YP_RS02810 IPR020594 Ribosomal protein L9, bacteria/chloroplast YP_RS02820 IPR001584 Integrase, catalytic core YP_RS02820 IPR006120 Resolvase, HTH domain YP_RS02820 IPR009057 Homeodomain-like YP_RS02820 IPR012337 Ribonuclease H-like domain YP_RS02825 IPR001270 ClpA/B family YP_RS02825 IPR002611 IstB-like ATP-binding protein YP_RS02825 IPR003593 AAA+ ATPase domain YP_RS02825 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02825 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS02830 IPR002686 Transposase IS200-like YP_RS02835 IPR022231 Protein of unknown function DUF3757 YP_RS02840 IPR007340 Opacity-associated protein A YP_RS02840 IPR013731 Opacity-associated protein A, N-terminal YP_RS02845 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YP_RS02845 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YP_RS02845 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YP_RS02850 IPR012312 Haemerythrin/HHE cation-binding motif YP_RS02850 IPR019903 Repair of iron centres family YP_RS02850 IPR023742 Iron-sulfur cluster repair protein YftE YP_RS02855 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YP_RS02855 IPR006146 5'-Nucleotidase, conserved site YP_RS02855 IPR006179 5'-Nucleotidase/apyrase YP_RS02855 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YP_RS02855 IPR008334 5'-Nucleotidase, C-terminal YP_RS02855 IPR029052 Metallo-dependent phosphatase-like YP_RS02860 IPR000760 Inositol monophosphatase YP_RS02860 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial YP_RS02860 IPR020550 Inositol monophosphatase, conserved site YP_RS02860 IPR020583 Inositol monophosphatase, metal-binding site YP_RS02865 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YP_RS02865 IPR012336 Thioredoxin-like fold YP_RS02870 IPR009491 Protein of unknown function DUF1107 YP_RS02875 IPR000644 CBS domain YP_RS02875 IPR002550 Domain of unknown function DUF21 YP_RS02875 IPR005170 Transporter-associated domain YP_RS02875 IPR016166 FAD-binding, type 2 YP_RS02875 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS02880 IPR002569 Peptide methionine sulphoxide reductase MsrA YP_RS02880 IPR028427 Peptide methionine sulfoxide reductase YP_RS02885 IPR000184 Bacterial surface antigen (D15) YP_RS02885 IPR010827 Surface antigen variable number YP_RS02890 IPR007452 Protein of unknown function DUF490 YP_RS02890 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS02895 IPR009288 AIG2-like YP_RS02895 IPR013024 Butirosin biosynthesis, BtrG-like YP_RS02900 IPR008162 Inorganic pyrophosphatase YP_RS02905 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase YP_RS02905 IPR020548 Fructose-1,6-bisphosphatase, active site YP_RS02905 IPR028343 Fructose-1,6-bisphosphatase YP_RS02905 IPR033391 YP_RS02905 YP_RS02910 IPR000713 Mur ligase, N-terminal YP_RS02910 IPR004101 Mur ligase, C-terminal YP_RS02910 IPR005757 Murein peptide ligase YP_RS02910 IPR013221 Mur ligase, central YP_RS02910 IPR016040 NAD(P)-binding domain YP_RS02920 IPR010854 Domain of unknown function DUF1471 YP_RS02920 IPR025543 Dodecin-like YP_RS02925 IPR001669 Arginine repressor YP_RS02925 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02925 IPR020899 Arginine repressor, C-terminal YP_RS02925 IPR020900 Arginine repressor, DNA-binding domain YP_RS02925 IPR024946 Arginine repressor C-terminal-like domain YP_RS02930 IPR001236 Lactate/malate dehydrogenase, N-terminal YP_RS02930 IPR001252 Malate dehydrogenase, active site YP_RS02930 IPR001557 L-lactate/malate dehydrogenase YP_RS02930 IPR010097 Malate dehydrogenase, type 1 YP_RS02930 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YP_RS02930 IPR016040 NAD(P)-binding domain YP_RS02930 IPR022383 Lactate/malate dehydrogenase, C-terminal YP_RS02930 IPR023958 Malate dehydrogenase, type 1, bacterial YP_RS02935 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS02940 IPR003314 Transposase MuA/Repressor CI, DNA-binding YP_RS02940 IPR009061 DNA binding domain, putative YP_RS02940 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02945 IPR000092 Polyprenyl synthetase YP_RS02945 IPR008949 Terpenoid synthase YP_RS02945 IPR017446 Polyprenyl synthetase-related YP_RS02950 IPR001787 Ribosomal protein L21 YP_RS02950 IPR018258 Ribosomal protein L21, conserved site YP_RS02950 IPR028909 Ribosomal protein L21-like YP_RS02955 IPR001684 Ribosomal protein L27 YP_RS02955 IPR018261 Ribosomal protein L27, conserved site YP_RS02960 IPR000620 Drug/metabolite transporter YP_RS02965 IPR006073 GTP binding domain YP_RS02965 IPR006074 GTP1/OBG, conserved site YP_RS02965 IPR006169 GTP1/OBG domain YP_RS02965 IPR014100 GTP-binding protein Obg/CgtA YP_RS02965 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS02970 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS02970 IPR003660 HAMP linker domain YP_RS02970 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS02970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS02975 IPR001789 Signal transduction response regulator, receiver domain YP_RS02975 IPR001867 Signal transduction response regulator, C-terminal YP_RS02975 IPR011006 CheY-like superfamily YP_RS02975 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS02980 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YP_RS02980 IPR012338 Beta-lactamase/transpeptidase-like YP_RS02985 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YP_RS02985 IPR006359 Transcription elongation factor GreA YP_RS02985 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YP_RS02985 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YP_RS02985 IPR023459 Transcription elongation factor GreA/GreB family YP_RS02985 IPR028624 Transcription elongation factor GreA/GreB YP_RS02990 IPR001890 RNA-binding, CRM domain YP_RS02990 IPR017924 RNA-binding protein YhbY YP_RS02995 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YP_RS02995 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YP_RS02995 IPR015507 Ribosomal RNA large subunit methyltransferase E YP_RS02995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS03000 IPR000642 Peptidase M41 YP_RS03000 IPR003593 AAA+ ATPase domain YP_RS03000 IPR003959 ATPase, AAA-type, core YP_RS03000 IPR003960 ATPase, AAA-type, conserved site YP_RS03000 IPR005936 Peptidase, FtsH YP_RS03000 IPR011546 Peptidase M41, FtsH extracellular YP_RS03000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03005 IPR000489 Pterin-binding YP_RS03005 IPR006390 Dihydropteroate synthase YP_RS03005 IPR011005 Dihydropteroate synthase-like YP_RS03010 IPR005841 Alpha-D-phosphohexomutase superfamily YP_RS03010 IPR005843 Alpha-D-phosphohexomutase, C-terminal YP_RS03010 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YP_RS03010 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YP_RS03010 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YP_RS03010 IPR006352 Phosphoglucosamine mutase YP_RS03010 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YP_RS03010 IPR016066 Alpha-D-phosphohexomutase, conserved site YP_RS03015 IPR004692 Preprotein translocase SecG subunit YP_RS03030 IPR003728 Ribosome maturation factor RimP YP_RS03030 IPR028989 Ribosome maturation factor RimP, N-terminal YP_RS03030 IPR028998 Ribosome maturation factor RimP, C-terminal YP_RS03035 IPR004087 K Homology domain YP_RS03035 IPR009019 K homology domain, prokaryotic type YP_RS03035 IPR010213 Transcription termination factor NusA YP_RS03035 IPR010214 Transcription termination factor NusA, C-terminal duplication YP_RS03035 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YP_RS03035 IPR012340 Nucleic acid-binding, OB-fold YP_RS03035 IPR013735 Transcription factor NusA, N-terminal YP_RS03035 IPR015946 K homology domain-like, alpha/beta YP_RS03035 IPR022967 RNA-binding domain, S1 YP_RS03035 IPR025249 KH domain, NusA-like YP_RS03035 IPR030842 YP_RS03035 YP_RS03040 IPR000178 Translation initiation factor aIF-2, bacterial-like YP_RS03040 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YP_RS03040 IPR005225 Small GTP-binding protein domain YP_RS03040 IPR006847 Translation initiation factor IF-2, N-terminal YP_RS03040 IPR009000 Translation protein, beta-barrel domain YP_RS03040 IPR009061 DNA binding domain, putative YP_RS03040 IPR013575 Initiation factor 2 associated domain, bacterial YP_RS03040 IPR023115 Translation initiation factor IF- 2, domain 3 YP_RS03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03045 IPR000238 Ribosome-binding factor A YP_RS03045 IPR015946 K homology domain-like, alpha/beta YP_RS03045 IPR020053 Ribosome-binding factor A, conserved site YP_RS03045 IPR023799 Ribosome-binding factor A domain YP_RS03050 IPR002501 Pseudouridine synthase II YP_RS03050 IPR014780 tRNA pseudouridine synthase II, TruB YP_RS03050 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YP_RS03050 IPR015947 PUA-like domain YP_RS03050 IPR020103 Pseudouridine synthase, catalytic domain YP_RS03050 IPR032819 YP_RS03050 YP_RS03055 IPR000589 Ribosomal protein S15 YP_RS03055 IPR005290 Ribosomal protein S15, bacterial-type YP_RS03055 IPR009068 S15/NS1, RNA-binding YP_RS03060 IPR009057 Homeodomain-like YP_RS03060 IPR010921 Trp repressor/replication initiator YP_RS03060 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS03065 IPR001584 Integrase, catalytic core YP_RS03065 IPR012337 Ribonuclease H-like domain YP_RS03065 IPR025948 HTH-like domain YP_RS03070 IPR001247 Exoribonuclease, phosphorolytic domain 1 YP_RS03070 IPR003029 Ribosomal protein S1, RNA-binding domain YP_RS03070 IPR004087 K Homology domain YP_RS03070 IPR004088 K Homology domain, type 1 YP_RS03070 IPR012162 Polyribonucleotide nucleotidyltransferase YP_RS03070 IPR012340 Nucleic acid-binding, OB-fold YP_RS03070 IPR015847 Exoribonuclease, phosphorolytic domain 2 YP_RS03070 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YP_RS03070 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS03070 IPR022967 RNA-binding domain, S1 YP_RS03070 IPR027408 PNPase/RNase PH domain YP_RS03075 IPR011990 Tetratricopeptide-like helical domain YP_RS03075 IPR013105 Tetratricopeptide TPR2 YP_RS03075 IPR019734 Tetratricopeptide repeat YP_RS03075 IPR023605 Lipoprotein NlpI YP_RS03080 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YP_RS03080 IPR001650 Helicase, C-terminal YP_RS03080 IPR005580 DbpA, RNA-binding YP_RS03080 IPR011545 DEAD/DEAH box helicase domain YP_RS03080 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS03080 IPR021046 Cold-shock protein, DEAD box A, C-terminal YP_RS03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03080 IPR028618 ATP-dependent RNA helicase DeaD YP_RS03090 IPR009241 Addiction module killer protein YP_RS03095 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS03095 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS03100 IPR011251 Luciferase-like domain YP_RS03100 IPR019949 Luciferase family oxidoreductase, group 1 YP_RS03105 IPR006143 RND efflux pump, membrane fusion protein YP_RS03105 IPR032317 YP_RS03105 YP_RS03110 IPR001036 Acriflavin resistance protein YP_RS03110 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YP_RS03110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YP_RS03115 IPR003423 Outer membrane efflux protein YP_RS03115 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YP_RS03120 IPR001539 Peptidase U32 YP_RS03125 IPR001539 Peptidase U32 YP_RS03125 IPR022998 Thiamin phosphate synthase superfamily YP_RS03135 IPR003033 SCP2 sterol-binding domain YP_RS03135 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YP_RS03140 IPR000182 GNAT domain YP_RS03140 IPR016181 Acyl-CoA N-acyltransferase YP_RS03145 IPR000305 GIY-YIG nuclease superfamily YP_RS03145 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YP_RS03150 IPR008397 Alginate lyase domain YP_RS03150 IPR008929 Chondroitin AC/alginate lyase YP_RS03150 IPR012480 Heparinase II/III-like YP_RS03155 IPR008397 Alginate lyase domain YP_RS03155 IPR008929 Chondroitin AC/alginate lyase YP_RS03160 IPR006059 Bacterial extracellular solute-binding, family 1 YP_RS03165 IPR000515 MetI-like domain YP_RS03170 IPR000515 MetI-like domain YP_RS03180 IPR008397 Alginate lyase domain YP_RS03180 IPR008929 Chondroitin AC/alginate lyase YP_RS03185 IPR011194 Uncharacterised protein family UPF0306 YP_RS03185 IPR012349 FMN-binding split barrel YP_RS03190 IPR000534 Semialdehyde dehydrogenase, NAD-binding YP_RS03190 IPR016040 NAD(P)-binding domain YP_RS03195 IPR001279 Beta-lactamase-like YP_RS03195 IPR017693 Phosphonate metabolism protein PhnP YP_RS03200 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YP_RS03200 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YP_RS03200 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03205 IPR011059 Metal-dependent hydrolase, composite domain YP_RS03205 IPR012696 Phosphonate metabolism PhnM YP_RS03205 IPR013108 Amidohydrolase 3 YP_RS03205 IPR032466 YP_RS03205 YP_RS03210 IPR003439 ABC transporter-like YP_RS03210 IPR003593 AAA+ ATPase domain YP_RS03210 IPR012701 Phosphonate C-P lyase system, PhnL YP_RS03210 IPR017871 ABC transporter, conserved site YP_RS03210 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03215 IPR003439 ABC transporter-like YP_RS03215 IPR003593 AAA+ ATPase domain YP_RS03215 IPR012700 Phosphonate C-P lyase system, PhnK YP_RS03215 IPR017871 ABC transporter, conserved site YP_RS03215 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03220 IPR010306 Phosphonate metabolism PhnJ YP_RS03225 IPR008773 Phosphonate metabolism protein PhnI YP_RS03230 IPR008772 Bacterial phosphonate metabolism, PhnH YP_RS03235 IPR009609 Phosphonate metabolism PhnG YP_RS03240 IPR000524 Transcription regulator HTH, GntR YP_RS03240 IPR011663 UbiC transcription regulator-associated YP_RS03240 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS03240 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YP_RS03240 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YP_RS03245 IPR001989 Radical-activating enzyme, conserved site YP_RS03245 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YP_RS03245 IPR013785 Aldolase-type TIM barrel YP_RS03250 IPR005144 ATP-cone YP_RS03250 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YP_RS03250 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YP_RS03255 IPR003439 ABC transporter-like YP_RS03255 IPR003593 AAA+ ATPase domain YP_RS03255 IPR017871 ABC transporter, conserved site YP_RS03255 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03260 IPR003439 ABC transporter-like YP_RS03260 IPR003593 AAA+ ATPase domain YP_RS03260 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03265 IPR000515 MetI-like domain YP_RS03265 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YP_RS03270 IPR000515 MetI-like domain YP_RS03280 IPR004375 Conserved hypothetical protein CHP00022 YP_RS03285 IPR002292 Ornithine/putrescine carbamoyltransferase YP_RS03285 IPR006130 Aspartate/ornithine carbamoyltransferase YP_RS03285 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YP_RS03285 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YP_RS03285 IPR024904 Ornithine carbamoyltransferase YP_RS03290 IPR009671 Regulator of ribonuclease activity B domain YP_RS03290 IPR016716 Regulator of ribonuclease activity B YP_RS03295 IPR000182 GNAT domain YP_RS03295 IPR016181 Acyl-CoA N-acyltransferase YP_RS03300 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS03300 IPR002300 Aminoacyl-tRNA synthetase, class Ia YP_RS03300 IPR002303 Valine-tRNA ligase YP_RS03300 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YP_RS03300 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YP_RS03300 IPR010978 tRNA-binding arm YP_RS03300 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YP_RS03300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS03300 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YP_RS03305 IPR007459 DNA polymerase III chi subunit, HolC YP_RS03310 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YP_RS03310 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YP_RS03310 IPR011356 Leucine aminopeptidase/peptidase B YP_RS03310 IPR023042 Peptidase M17, leucine aminopeptidase YP_RS03315 IPR005495 Permease YjgP/YjgQ, predicted YP_RS03315 IPR030922 YP_RS03315 YP_RS03320 IPR005495 Permease YjgP/YjgQ, predicted YP_RS03320 IPR030923 YP_RS03320 YP_RS03330 IPR002104 Integrase, catalytic YP_RS03330 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS03330 IPR013762 Integrase-like, catalytic core YP_RS03330 IPR023109 Integrase/recombinase, N-terminal YP_RS03330 IPR025166 Domain of unknown function DUF4102 YP_RS03335 IPR004919 Domain of unknown function DUF262 YP_RS03335 IPR011089 Domain of unknown function DUF1524 YP_RS03340 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS03345 IPR001270 ClpA/B family YP_RS03345 IPR002611 IstB-like ATP-binding protein YP_RS03345 IPR003593 AAA+ ATPase domain YP_RS03345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03345 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS03350 IPR001584 Integrase, catalytic core YP_RS03350 IPR006120 Resolvase, HTH domain YP_RS03350 IPR009057 Homeodomain-like YP_RS03350 IPR012337 Ribonuclease H-like domain YP_RS03355 IPR002686 Transposase IS200-like YP_RS03360 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein YP_RS03365 IPR011990 Tetratricopeptide-like helical domain YP_RS03365 IPR017689 Outer membrane protein assembly factor BamD YP_RS03370 IPR002942 RNA-binding S4 domain YP_RS03370 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YP_RS03370 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YP_RS03370 IPR006225 Pseudouridine synthase, RluC/RluD YP_RS03370 IPR020103 Pseudouridine synthase, catalytic domain YP_RS03375 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YP_RS03375 IPR011324 Cytotoxic necrotizing factor-like, catalytic YP_RS03380 IPR001270 ClpA/B family YP_RS03380 IPR003593 AAA+ ATPase domain YP_RS03380 IPR003959 ATPase, AAA-type, core YP_RS03380 IPR004176 Clp, N-terminal YP_RS03380 IPR017730 Chaperonin ClpB YP_RS03380 IPR018368 ClpA/B, conserved site 1 YP_RS03380 IPR019489 Clp ATPase, C-terminal YP_RS03380 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03380 IPR028299 ClpA/B, conserved site 2 YP_RS03420 IPR017028 Uncharacterised conserved protein UCP034456 YP_RS03420 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YP_RS03425 IPR001736 Phospholipase D/Transphosphatidylase YP_RS03425 IPR016270 Phospholipase D, phosphatidylserine synthase type YP_RS03425 IPR025202 Phospholipase D-like domain YP_RS03430 IPR000182 GNAT domain YP_RS03430 IPR003781 CoA-binding YP_RS03430 IPR016040 NAD(P)-binding domain YP_RS03430 IPR016102 Succinyl-CoA synthetase-like YP_RS03430 IPR016181 Acyl-CoA N-acyltransferase YP_RS03430 IPR032875 YP_RS03430 YP_RS03435 IPR005636 DTW YP_RS03440 IPR005746 Thioredoxin YP_RS03440 IPR012336 Thioredoxin-like fold YP_RS03440 IPR013766 Thioredoxin domain YP_RS03440 IPR017937 Thioredoxin, conserved site YP_RS03445 IPR001537 tRNA/rRNA methyltransferase, SpoU type YP_RS03445 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YP_RS03445 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YP_RS03445 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS03445 IPR029028 Alpha/beta knot methyltransferases YP_RS03445 IPR029064 50S ribosomal protein L30e-like YP_RS03450 IPR004638 Drug resistance transporter EmrB/QacA subfamily YP_RS03450 IPR011701 Major facilitator superfamily YP_RS03450 IPR020846 Major facilitator superfamily domain YP_RS03455 IPR005694 Efflux pump membrane protein Emr YP_RS03455 IPR006143 RND efflux pump, membrane fusion protein YP_RS03455 IPR032317 YP_RS03455 YP_RS03460 IPR000835 MarR-type HTH domain YP_RS03460 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS03460 IPR023187 Transcriptional regulator MarR-type, conserved site YP_RS03465 IPR008407 Branched-chain amino acid transport, AzlD YP_RS03470 IPR011606 Branched-chain amino acid transport, permease YP_RS03475 IPR011701 Major facilitator superfamily YP_RS03475 IPR020846 Major facilitator superfamily domain YP_RS03480 IPR024507 Protein of unknown function DUF3225 YP_RS03480 IPR032710 YP_RS03480 YP_RS03485 IPR000120 Amidase YP_RS03485 IPR014087 Amidohydrolase, AtzE type YP_RS03485 IPR023631 Amidase signature domain YP_RS03490 IPR025148 Protein of unknown function DUF4089 YP_RS03495 IPR000281 Helix-turn-helix protein RpiR YP_RS03495 IPR001347 Sugar isomerase (SIS) YP_RS03495 IPR009057 Homeodomain-like YP_RS03495 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS03505 IPR001638 Extracellular solute-binding protein, family 3 YP_RS03505 IPR018313 Extracellular solute-binding protein, family 3, conserved site YP_RS03510 IPR000515 MetI-like domain YP_RS03510 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS03515 IPR000515 MetI-like domain YP_RS03515 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS03520 IPR003439 ABC transporter-like YP_RS03520 IPR003593 AAA+ ATPase domain YP_RS03520 IPR017871 ABC transporter, conserved site YP_RS03520 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03520 IPR030679 YP_RS03520 YP_RS03525 IPR000192 Aminotransferase class V domain YP_RS03525 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS03525 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS03530 IPR001270 ClpA/B family YP_RS03530 IPR002611 IstB-like ATP-binding protein YP_RS03530 IPR003593 AAA+ ATPase domain YP_RS03530 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03530 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS03535 IPR001584 Integrase, catalytic core YP_RS03535 IPR006120 Resolvase, HTH domain YP_RS03535 IPR009057 Homeodomain-like YP_RS03535 IPR012337 Ribonuclease H-like domain YP_RS03540 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS03540 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS03545 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YP_RS03545 IPR002933 Peptidase M20 YP_RS03545 IPR010158 Amidase, hydantoinase/carbamoylase YP_RS03545 IPR011650 Peptidase M20, dimerisation domain YP_RS03550 IPR013686 Polypeptide-transport-associated, ShlB-type YP_RS03555 IPR006626 Parallel beta-helix repeat YP_RS03555 IPR008638 Filamentous haemagglutinin, N-terminal YP_RS03555 IPR011050 Pectin lyase fold/virulence factor YP_RS03555 IPR012334 Pectin lyase fold YP_RS03555 IPR024973 ESPR domain YP_RS03565 IPR004356 Adhesin operon regulatory protein YP_RS03570 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YP_RS03570 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YP_RS03570 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YP_RS03570 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YP_RS03575 IPR001347 Sugar isomerase (SIS) YP_RS03575 IPR004515 Phosphoheptose isomerase YP_RS03580 IPR026869 Putative glutamine amidotransferase type 2 YP_RS03580 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS03585 IPR005490 L,D-transpeptidase catalytic domain YP_RS03590 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A YP_RS03590 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal YP_RS03595 IPR004338 NADH-quinone reductase NQR2/RnfD YP_RS03595 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit YP_RS03600 IPR007329 FMN-binding YP_RS03600 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit YP_RS03605 IPR003667 Electron transport complex, Rnf/Nqr YP_RS03605 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit YP_RS03610 IPR003667 Electron transport complex, Rnf/Nqr YP_RS03610 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YP_RS03615 IPR001041 2Fe-2S ferredoxin-type domain YP_RS03615 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS03615 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YP_RS03615 IPR008333 Oxidoreductase, FAD-binding domain YP_RS03615 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit YP_RS03615 IPR012675 Beta-grasp domain YP_RS03615 IPR017938 Riboflavin synthase-like beta-barrel YP_RS03620 IPR003374 ApbE-like domain YP_RS03620 IPR024932 Flavin transferase ApbE YP_RS03625 IPR007495 Protein of unknown function DUF539 YP_RS03630 IPR004129 Glycerophosphoryl diester phosphodiesterase YP_RS03630 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YP_RS03630 IPR030395 YP_RS03630 YP_RS03635 IPR001126 DNA-repair protein, UmuC-like YP_RS03635 IPR017961 DNA polymerase, Y-family, little finger domain YP_RS03635 IPR022880 DNA polymerase IV YP_RS03635 IPR024728 DNA polymerase type-Y, HhH motif YP_RS03640 IPR001160 Peptidase M20C, Xaa-His dipeptidase YP_RS03640 IPR002933 Peptidase M20 YP_RS03640 IPR011650 Peptidase M20, dimerisation domain YP_RS03650 IPR005119 LysR, substrate-binding YP_RS03650 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS03655 IPR000601 PKD domain YP_RS03655 IPR004302 Chitin-binding, domain 3 YP_RS03655 IPR014756 Immunoglobulin E-set YP_RS03655 IPR022409 PKD/Chitinase domain YP_RS03660 IPR032126 YP_RS03660 YP_RS03665 IPR000836 Phosphoribosyltransferase domain YP_RS03665 IPR023747 Xanthine-guanine phosphoribosyltransferase YP_RS03665 IPR029057 Phosphoribosyltransferase-like YP_RS03670 IPR010520 Protein of unknown function DUF1100, hydrolase-like YP_RS03670 IPR029058 Alpha/Beta hydrolase fold YP_RS03675 IPR009986 Sigma factor-binding protein Crl YP_RS03680 IPR001048 Aspartate/glutamate/uridylate kinase YP_RS03680 IPR001057 Glutamate/acetylglutamate kinase YP_RS03680 IPR002478 PUA domain YP_RS03680 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YP_RS03680 IPR011529 Glutamate 5-kinase YP_RS03680 IPR015947 PUA-like domain YP_RS03680 IPR019797 Glutamate 5-kinase, conserved site YP_RS03685 IPR000965 Gamma-glutamyl phosphate reductase GPR YP_RS03685 IPR012134 Glutamate-5-semialdehyde dehydrogenase YP_RS03685 IPR015590 Aldehyde dehydrogenase domain YP_RS03685 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS03685 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS03685 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS03685 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YP_RS03690 IPR009875 PilZ domain YP_RS03690 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YP_RS03690 IPR012349 FMN-binding split barrel YP_RS03690 IPR023787 Type III secretion system flagellar brake protein YcgR YP_RS03700 IPR013216 Methyltransferase type 11 YP_RS03700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS03710 IPR001737 Ribosomal RNA adenine methylase transferase YP_RS03710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS03715 IPR000623 Shikimate kinase/Threonine synthase-like 1 YP_RS03715 IPR023000 Shikimate kinase, conserved site YP_RS03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03715 IPR027544 Shikimate kinase 2 YP_RS03715 IPR031322 YP_RS03715 YP_RS03725 IPR009664 Protein of unknown function DUF1255 YP_RS03725 IPR011051 RmlC-like cupin domain YP_RS03725 IPR014710 RmlC-like jelly roll fold YP_RS03730 IPR007476 Putative exonuclease, RdgC YP_RS03735 IPR000600 ROK YP_RS03740 IPR027050 Nuclease SbcCD subunit C YP_RS03740 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS03745 IPR004593 Nuclease SbcCD subunit D YP_RS03745 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YP_RS03745 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YP_RS03745 IPR029052 Metallo-dependent phosphatase-like YP_RS03755 IPR001789 Signal transduction response regulator, receiver domain YP_RS03755 IPR001867 Signal transduction response regulator, C-terminal YP_RS03755 IPR011006 CheY-like superfamily YP_RS03755 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YP_RS03755 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS03755 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS03760 IPR000014 PAS domain YP_RS03760 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS03760 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS03760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS03760 IPR013767 PAS fold YP_RS03760 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YP_RS03760 IPR021766 Protein of unknown function DUF3329 YP_RS03765 IPR011862 Phosphate binding protein YP_RS03765 IPR024370 PBP domain YP_RS03770 IPR004685 Branched-chain amino acid transport system II carrier protein YP_RS03775 IPR002293 Amino acid/polyamine transporter I YP_RS03775 IPR004840 Amino acid permease, conserved site YP_RS03775 IPR004841 Amino acid permease/ SLC12A domain YP_RS03780 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YP_RS03780 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YP_RS03780 IPR013780 Glycosyl hydrolase, family 13, all-beta YP_RS03780 IPR013781 Glycoside hydrolase, catalytic domain YP_RS03780 IPR014756 Immunoglobulin E-set YP_RS03780 IPR015902 Glycoside hydrolase, family 13 YP_RS03780 IPR017069 Maltodextrin glucosidase YP_RS03780 IPR017853 Glycoside hydrolase, superfamily YP_RS03785 IPR002347 Glucose/ribitol dehydrogenase YP_RS03785 IPR016040 NAD(P)-binding domain YP_RS03790 IPR000101 Gamma-glutamyltranspeptidase YP_RS03790 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS03795 IPR000101 Gamma-glutamyltranspeptidase YP_RS03795 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS03805 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YP_RS03805 IPR012336 Thioredoxin-like fold YP_RS03805 IPR019479 Peroxiredoxin, C-terminal YP_RS03805 IPR024706 Peroxiredoxin, AhpC-type YP_RS03810 IPR007431 Acyl carrier protein phosphodiesterase YP_RS03810 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YP_RS03815 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YP_RS03820 IPR002616 tRNA-guanine(15) transglycosylase-like YP_RS03820 IPR004803 Queuine tRNA-ribosyltransferase YP_RS03825 IPR003849 Preprotein translocase YajC YP_RS03830 IPR005791 Protein translocase subunit SecD YP_RS03830 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YP_RS03830 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YP_RS03830 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YP_RS03830 IPR027398 SecD export protein N-terminal TM domain YP_RS03835 IPR005665 Protein-export membrane protein SecF, bacterial YP_RS03835 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YP_RS03835 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YP_RS03835 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YP_RS03840 IPR002686 Transposase IS200-like YP_RS03855 IPR003796 Ribonucleotide reductase regulator NrdR-like YP_RS03855 IPR005144 ATP-cone YP_RS03860 IPR002125 CMP/dCMP deaminase, zinc-binding YP_RS03860 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YP_RS03860 IPR004794 Riboflavin biosynthesis protein RibD YP_RS03860 IPR011549 Riboflavin-specific deaminase, C-terminal YP_RS03860 IPR016192 APOBEC/CMP deaminase, zinc-binding YP_RS03860 IPR016193 Cytidine deaminase-like YP_RS03860 IPR024072 Dihydrofolate reductase-like domain YP_RS03865 IPR002180 6,7-dimethyl-8-ribityllumazine synthase YP_RS03870 IPR006027 NusB/RsmB/TIM44 YP_RS03870 IPR011605 NusB antitermination factor YP_RS03875 IPR006283 Thiamine-monophosphate kinase YP_RS03875 IPR010918 AIR synthase-related protein, C-terminal domain YP_RS03875 IPR016188 PurM, N-terminal-like YP_RS03880 IPR007686 YutG/PgpA domain YP_RS03880 IPR026037 Phosphatidylglycerophosphatase A YP_RS03880 IPR027416 YutG-like domain YP_RS03890 IPR002686 Transposase IS200-like YP_RS03895 IPR005474 Transketolase, N-terminal YP_RS03895 IPR005475 Transketolase-like, pyrimidine-binding domain YP_RS03895 IPR005477 Deoxyxylulose-5-phosphate synthase YP_RS03895 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YP_RS03895 IPR020826 Transketolase binding site YP_RS03895 IPR029061 Thiamin diphosphate-binding fold YP_RS03895 IPR033247 YP_RS03895 YP_RS03895 IPR033248 YP_RS03895 YP_RS03900 IPR000092 Polyprenyl synthetase YP_RS03900 IPR008949 Terpenoid synthase YP_RS03900 IPR017446 Polyprenyl synthetase-related YP_RS03905 IPR003761 Exonuclease VII, small subunit YP_RS03915 IPR001763 Rhodanese-like domain YP_RS03915 IPR003720 tRNA sulfurtransferase ThiI YP_RS03915 IPR004114 THUMP YP_RS03915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS03915 IPR020536 Thil, AANH domain YP_RS03915 IPR026340 Thiazole biosynthesis domain YP_RS03920 IPR002818 ThiJ/PfpI YP_RS03920 IPR006287 DJ-1 YP_RS03920 IPR029062 Class I glutamine amidotransferase-like YP_RS03925 IPR003710 Ketopantoate reductase ApbA/PanE YP_RS03925 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS03925 IPR013328 Dehydrogenase, multihelical YP_RS03925 IPR013332 Ketopantoate reductase, N-terminal domain YP_RS03925 IPR013752 Ketopantoate reductase, C-terminal domain YP_RS03925 IPR016040 NAD(P)-binding domain YP_RS03930 IPR007551 Protein of unknown function DUF520 YP_RS03935 IPR011701 Major facilitator superfamily YP_RS03935 IPR020846 Major facilitator superfamily domain YP_RS03940 IPR000537 UbiA prenyltransferase family YP_RS03940 IPR006369 Protohaem IX farnesyltransferase YP_RS03940 IPR030470 YP_RS03940 YP_RS03945 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YP_RS03945 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YP_RS03950 IPR000298 Cytochrome c oxidase subunit III domain YP_RS03950 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YP_RS03950 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YP_RS03950 IPR024791 Cytochrome c oxidase subunit III YP_RS03955 IPR000883 Cytochrome c oxidase subunit I YP_RS03955 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YP_RS03955 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YP_RS03955 IPR023616 Cytochrome c oxidase, subunit I domain YP_RS03960 IPR006333 Cytochrome o ubiquinol oxidase subunit II YP_RS03960 IPR008972 Cupredoxin YP_RS03960 IPR010514 COX aromatic rich motif YP_RS03960 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain YP_RS03965 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YP_RS03970 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YP_RS03970 IPR011701 Major facilitator superfamily YP_RS03970 IPR020846 Major facilitator superfamily domain YP_RS03975 IPR005619 Uncharacterised protein family, YajG YP_RS03975 IPR012640 Membrane lipoprotein, lipid attachment site YP_RS03980 IPR002634 BolA protein YP_RS03990 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YP_RS03990 IPR005215 Trigger factor YP_RS03990 IPR008880 Trigger factor, C-terminal domain YP_RS03990 IPR008881 Trigger factor, ribosome-binding, bacterial YP_RS03990 IPR027304 Trigger factor/SurA domain YP_RS03995 IPR001907 ATP-dependent Clp protease proteolytic subunit YP_RS03995 IPR018215 ClpP, active site YP_RS03995 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YP_RS03995 IPR029045 ClpP/crotonase-like domain YP_RS03995 IPR033135 YP_RS03995 YP_RS04000 IPR003593 AAA+ ATPase domain YP_RS04000 IPR003959 ATPase, AAA-type, core YP_RS04000 IPR004487 Clp protease, ATP-binding subunit ClpX YP_RS04000 IPR010603 Zinc finger, ClpX C4-type YP_RS04000 IPR019489 Clp ATPase, C-terminal YP_RS04000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04005 IPR003111 Peptidase S16, lon N-terminal YP_RS04005 IPR003593 AAA+ ATPase domain YP_RS04005 IPR003959 ATPase, AAA-type, core YP_RS04005 IPR004815 Lon protease, bacterial/eukaryotic-type YP_RS04005 IPR008268 Peptidase S16, active site YP_RS04005 IPR008269 Peptidase S16, Lon C-terminal YP_RS04005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS04005 IPR015947 PUA-like domain YP_RS04005 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS04005 IPR027065 Lon protease YP_RS04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04005 IPR027543 Lon protease, bacterial YP_RS04010 IPR000119 Histone-like bacterial DNA-binding protein YP_RS04010 IPR010992 Integration host factor (IHF)-like DNA-binding domain YP_RS04010 IPR020816 Histone-like DNA-binding protein, conserved site YP_RS04015 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YP_RS04015 IPR008880 Trigger factor, C-terminal domain YP_RS04015 IPR027304 Trigger factor/SurA domain YP_RS04020 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YP_RS04020 IPR010994 RuvA domain 2-like YP_RS04025 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YP_RS04025 IPR029069 HotDog domain YP_RS04030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS04030 IPR018317 Queuosine biosynthesis protein QueC YP_RS04035 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS04035 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YP_RS04040 IPR000150 Cof protein YP_RS04040 IPR006379 HAD-superfamily hydrolase, subfamily IIB YP_RS04040 IPR023214 HAD-like domain YP_RS04040 IPR023938 HMP-PP phosphatase YP_RS04045 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS04050 IPR000485 AsnC-type HTH domain YP_RS04050 IPR011008 Dimeric alpha-beta barrel YP_RS04050 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS04050 IPR019887 Transcription regulator AsnC-type, C-terminal YP_RS04050 IPR019888 Transcription regulator AsnC-type YP_RS04055 IPR003439 ABC transporter-like YP_RS04055 IPR003593 AAA+ ATPase domain YP_RS04055 IPR011527 ABC transporter type 1, transmembrane domain YP_RS04055 IPR017871 ABC transporter, conserved site YP_RS04055 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04060 IPR003439 ABC transporter-like YP_RS04060 IPR003593 AAA+ ATPase domain YP_RS04060 IPR011527 ABC transporter type 1, transmembrane domain YP_RS04060 IPR017871 ABC transporter, conserved site YP_RS04060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04065 IPR002187 Nitrogen regulatory protein PII YP_RS04065 IPR002332 Nitrogen regulatory protein P-II, urydylation site YP_RS04065 IPR011322 Nitrogen regulatory PII-like, alpha/beta YP_RS04065 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YP_RS04065 IPR017918 Nitrogen regulatory protein PII, conserved site YP_RS04070 IPR001905 Ammonium transporter YP_RS04070 IPR018047 Ammonium transporter, conserved site YP_RS04070 IPR024041 Ammonium transporter AmtB-like domain YP_RS04070 IPR029020 Ammonium/urea transporter YP_RS04075 IPR003703 Acyl-CoA thioesterase YP_RS04075 IPR029069 HotDog domain YP_RS04085 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS04085 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_RS04090 IPR007985 Haemolysin expression modulating, HHA YP_RS04095 IPR019693 Biofilm formation regulator YbaJ YP_RS04105 IPR000473 Ribosomal protein L36 YP_RS04110 IPR002150 Ribosomal protein L31 YP_RS04110 IPR027493 Ribosomal protein L31 type B YP_RS04115 IPR001036 Acriflavin resistance protein YP_RS04115 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YP_RS04115 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YP_RS04120 IPR006143 RND efflux pump, membrane fusion protein YP_RS04120 IPR032317 YP_RS04120 YP_RS04125 IPR001647 DNA-binding HTH domain, TetR-type YP_RS04125 IPR009057 Homeodomain-like YP_RS04125 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YP_RS04125 IPR013572 Transcription regulator MAATS, C-terminal YP_RS04125 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS04125 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YP_RS04130 IPR003787 Sulphur relay, DsrE/F-like protein YP_RS04130 IPR027396 DsrEFH-like YP_RS04135 IPR006685 Mechanosensitive ion channel MscS YP_RS04135 IPR006686 Mechanosensitive ion channel MscS, conserved site YP_RS04135 IPR010920 Like-Sm (LSM) domain YP_RS04135 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YP_RS04135 IPR011066 Mechanosensitive ion channel MscS, C-terminal YP_RS04135 IPR024393 Mechanosensitive ion channel MscS, porin domain YP_RS04135 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YP_RS04140 IPR019630 Protein of unknown function DUF2496, YbaM-related YP_RS04145 IPR010890 Primosomal replication PriB/PriC YP_RS04155 IPR000836 Phosphoribosyltransferase domain YP_RS04155 IPR005764 Adenine phosphoribosyl transferase YP_RS04155 IPR029057 Phosphoribosyltransferase-like YP_RS04160 IPR001270 ClpA/B family YP_RS04160 IPR003593 AAA+ ATPase domain YP_RS04160 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YP_RS04160 IPR012763 DNA polymerase III, subunit gamma/ tau YP_RS04160 IPR021029 DNA polymerase III, tau subunit, domain V YP_RS04160 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YP_RS04160 IPR022754 DNA polymerase III, gamma subunit, domain III YP_RS04160 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04165 IPR004401 Nucleoid-associated protein YbaB YP_RS04170 IPR000093 DNA recombination protein RecR YP_RS04170 IPR006171 Toprim domain YP_RS04170 IPR015967 Recombination protein RecR, conserved site YP_RS04170 IPR023627 Recombination protein RecR YP_RS04170 IPR023628 Recombination protein RecR, C4-type zinc finger YP_RS04175 IPR001404 Heat shock protein Hsp90 family YP_RS04175 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS04175 IPR019805 Heat shock protein Hsp90, conserved site YP_RS04175 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS04175 IPR020575 Heat shock protein Hsp90, N-terminal YP_RS04180 IPR000850 Adenylate kinase/UMP-CMP kinase YP_RS04180 IPR006259 Adenylate kinase subfamily YP_RS04180 IPR007862 Adenylate kinase, active site lid domain YP_RS04180 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04185 IPR001015 Ferrochelatase YP_RS04185 IPR019772 Ferrochelatase, active site YP_RS04190 IPR001041 2Fe-2S ferredoxin-type domain YP_RS04190 IPR001221 Phenol hydroxylase reductase YP_RS04190 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS04190 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YP_RS04190 IPR008333 Oxidoreductase, FAD-binding domain YP_RS04190 IPR012675 Beta-grasp domain YP_RS04190 IPR017938 Riboflavin synthase-like beta-barrel YP_RS04195 IPR005835 Nucleotidyl transferase YP_RS04195 IPR013446 Glucose-1-phosphate cytidylyltransferase YP_RS04195 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS04200 IPR013445 CDP-glucose 4,6-dehydratase YP_RS04200 IPR016040 NAD(P)-binding domain YP_RS04205 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YP_RS04205 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS04205 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS04205 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS04210 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS04210 IPR016040 NAD(P)-binding domain YP_RS04215 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS04225 IPR001173 Glycosyltransferase 2-like YP_RS04225 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS04240 IPR001296 Glycosyl transferase, family 1 YP_RS04240 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain YP_RS04250 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS04250 IPR016040 NAD(P)-binding domain YP_RS04250 IPR028614 GDP-L-fucose synthase YP_RS04260 IPR001173 Glycosyltransferase 2-like YP_RS04260 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS04265 IPR005841 Alpha-D-phosphohexomutase superfamily YP_RS04265 IPR005843 Alpha-D-phosphohexomutase, C-terminal YP_RS04265 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YP_RS04265 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YP_RS04265 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YP_RS04265 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YP_RS04265 IPR016066 Alpha-D-phosphohexomutase, conserved site YP_RS04270 IPR003856 Lipopolysaccharide biosynthesis YP_RS04275 IPR011611 Carbohydrate kinase PfkB YP_RS04275 IPR029056 Ribokinase-like YP_RS04280 IPR003148 Regulator of K+ conductance, N-terminal YP_RS04280 IPR004771 K+/H+ exchanger YP_RS04280 IPR006153 Cation/H+ exchanger YP_RS04280 IPR016040 NAD(P)-binding domain YP_RS04285 IPR011701 Major facilitator superfamily YP_RS04285 IPR020846 Major facilitator superfamily domain YP_RS04290 IPR006146 5'-Nucleotidase, conserved site YP_RS04290 IPR006179 5'-Nucleotidase/apyrase YP_RS04290 IPR029052 Metallo-dependent phosphatase-like YP_RS04295 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YP_RS04295 IPR006146 5'-Nucleotidase, conserved site YP_RS04295 IPR006179 5'-Nucleotidase/apyrase YP_RS04295 IPR029052 Metallo-dependent phosphatase-like YP_RS04300 IPR006179 5'-Nucleotidase/apyrase YP_RS04300 IPR008334 5'-Nucleotidase, C-terminal YP_RS04315 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YP_RS04315 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YP_RS04320 IPR002816 Pheromone shutdown, TraB YP_RS04325 IPR001757 Cation-transporting P-type ATPase YP_RS04325 IPR006121 Heavy metal-associated domain, HMA YP_RS04325 IPR008250 P-type ATPase, A domain YP_RS04325 IPR017969 Heavy-metal-associated, conserved site YP_RS04325 IPR018303 P-type ATPase, phosphorylation site YP_RS04325 IPR023214 HAD-like domain YP_RS04325 IPR023299 P-type ATPase, cytoplasmic domain N YP_RS04325 IPR027256 Cation-transporting P-type ATPase, subfamily IB YP_RS04330 IPR000551 MerR-type HTH domain YP_RS04330 IPR009061 DNA binding domain, putative YP_RS04330 IPR011789 Cu(I)-responsive transcriptional regulator YP_RS04335 IPR002810 NfeD-like, C-terminal domain YP_RS04335 IPR012340 Nucleic acid-binding, OB-fold YP_RS04340 IPR001107 Band 7 protein YP_RS04340 IPR001972 Stomatin family YP_RS04340 IPR018080 Band 7/stomatin-like, conserved site YP_RS04345 IPR005746 Thioredoxin YP_RS04345 IPR011990 Tetratricopeptide-like helical domain YP_RS04345 IPR012336 Thioredoxin-like fold YP_RS04345 IPR013766 Thioredoxin domain YP_RS04350 IPR002347 Glucose/ribitol dehydrogenase YP_RS04350 IPR016040 NAD(P)-binding domain YP_RS04350 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS04355 IPR008265 Lipase, GDSL, active site YP_RS04355 IPR013830 YP_RS04355 YP_RS04360 IPR003439 ABC transporter-like YP_RS04360 IPR003593 AAA+ ATPase domain YP_RS04360 IPR017871 ABC transporter, conserved site YP_RS04360 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04365 IPR003838 Permease FtsX-like YP_RS04370 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YP_RS04370 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YP_RS04370 IPR011054 Rudiment single hybrid motif YP_RS04370 IPR013816 ATP-grasp fold, subdomain 2 YP_RS04370 IPR016185 Pre-ATP-grasp domain YP_RS04375 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain YP_RS04375 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE YP_RS04380 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YP_RS04380 IPR010138 UDP-2,3-diacylglucosamine hydrolase YP_RS04380 IPR029052 Metallo-dependent phosphatase-like YP_RS04385 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YP_RS04385 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YP_RS04385 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YP_RS04385 IPR029000 Cyclophilin-like domain YP_RS04390 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YP_RS04390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS04390 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YP_RS04390 IPR015803 Cysteine-tRNA ligase YP_RS04390 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YP_RS04390 IPR032678 YP_RS04390 YP_RS04400 IPR002686 Transposase IS200-like YP_RS04405 IPR002942 RNA-binding S4 domain YP_RS04410 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YP_RS04410 IPR016040 NAD(P)-binding domain YP_RS04410 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_RS04410 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YP_RS04410 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YP_RS04420 IPR010260 Bacteriophage P4, Orf88 YP_RS04450 IPR000462 CDP-alcohol phosphatidyltransferase YP_RS04455 IPR000374 Phosphatidate cytidylyltransferase YP_RS04460 IPR002123 Phospholipid/glycerol acyltransferase YP_RS04465 IPR022742 Putative lysophospholipase YP_RS04465 IPR022744 Methyltransferase domain, putative YP_RS04465 IPR029058 Alpha/Beta hydrolase fold YP_RS04465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS04470 IPR000340 Dual specificity phosphatase, catalytic domain YP_RS04470 IPR003595 Protein-tyrosine phosphatase, catalytic YP_RS04470 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain YP_RS04470 IPR024950 Dual specificity phosphatase YP_RS04470 IPR026841 YP_RS04470 YP_RS04470 IPR029021 Protein-tyrosine phosphatase-like YP_RS04485 IPR001270 ClpA/B family YP_RS04485 IPR002611 IstB-like ATP-binding protein YP_RS04485 IPR003593 AAA+ ATPase domain YP_RS04485 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04485 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS04490 IPR001584 Integrase, catalytic core YP_RS04490 IPR006120 Resolvase, HTH domain YP_RS04490 IPR009057 Homeodomain-like YP_RS04490 IPR012337 Ribonuclease H-like domain YP_RS04495 IPR014030 Beta-ketoacyl synthase, N-terminal YP_RS04495 IPR016039 Thiolase-like YP_RS04505 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YP_RS04505 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YP_RS04505 IPR029069 HotDog domain YP_RS04510 IPR008269 Peptidase S16, Lon C-terminal YP_RS04510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS04510 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS04510 IPR027065 Lon protease YP_RS04515 IPR009390 Macrodomain Ter protein, MatP YP_RS04520 IPR002686 Transposase IS200-like YP_RS04525 IPR007358 Nucleoid-associated protein NdpA YP_RS04530 IPR009857 Uncharacterised protein family UPF0352 YP_RS04530 IPR023202 YejL-like domain YP_RS04535 IPR000917 Sulfatase YP_RS04535 IPR012159 Membrane sulfatase, HI0842-related YP_RS04535 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS04535 IPR017850 Alkaline-phosphatase-like, core domain YP_RS04535 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain YP_RS04550 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type YP_RS04550 IPR024622 Colicin/pyocin, DNase domain YP_RS04570 IPR001360 Glycoside hydrolase, family 1 YP_RS04570 IPR013781 Glycoside hydrolase, catalytic domain YP_RS04570 IPR017853 Glycoside hydrolase, superfamily YP_RS04570 IPR018120 Glycoside hydrolase, family 1, active site YP_RS04570 IPR033132 YP_RS04570 YP_RS04575 IPR000281 Helix-turn-helix protein RpiR YP_RS04575 IPR001347 Sugar isomerase (SIS) YP_RS04575 IPR009057 Homeodomain-like YP_RS04575 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS04580 IPR011083 Phage tail collar domain YP_RS04585 IPR018755 Bacteriophage Mu, Gp48 YP_RS04590 IPR018755 Bacteriophage Mu, Gp48 YP_RS04595 IPR006949 Baseplate assembly protein J-like, predicted YP_RS04600 IPR010877 Bacteriophage Mu, Gp46 YP_RS04605 IPR014462 Bacteriophage Mu, Gp45 YP_RS04610 IPR026276 Baseplate protein GpP YP_RS04615 IPR009826 DNA circulation, N-terminal YP_RS04625 IPR019289 Bacteriophage tail protein Gp41, putative YP_RS04630 IPR019596 Bacteriophage Mu, GpM, tail tube YP_RS04635 IPR007067 Tail sheath protein YP_RS04640 IPR024400 Protein of unknown function DUF2635 YP_RS04655 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS04655 IPR026040 Hydroxypyruvate isomerase-like YP_RS04660 IPR001034 HTH DeoR N-terminal domain YP_RS04660 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS04660 IPR014036 DeoR C-terminal sensor domain YP_RS04660 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YP_RS04670 IPR010737 Protein of unknown function, DUF1537 YP_RS04670 IPR031475 YP_RS04670 YP_RS04675 IPR010534 Bacteriophage 933W, GpQ YP_RS04680 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS04680 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS04680 IPR015927 Peptidase S24/S26A/S26B/S26C YP_RS04680 IPR019759 Peptidase S24/S26A/S26B YP_RS04680 IPR028360 Peptidase S24/S26, beta-ribbon domain YP_RS04685 IPR010391 DNA damage-inducible protein DinI-like YP_RS04690 IPR000036 Peptidase A26, omptin YP_RS04690 IPR020080 Outer membrane adhesin/peptidase omptin YP_RS04690 IPR023619 Peptidase A26 YP_RS04695 IPR003660 HAMP linker domain YP_RS04695 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YP_RS04695 IPR029151 Periplasmic sensor domain-like YP_RS04695 IPR033479 YP_RS04695 YP_RS04700 IPR001279 Beta-lactamase-like YP_RS04700 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YP_RS04705 IPR020846 Major facilitator superfamily domain YP_RS04715 IPR001466 Beta-lactamase-related YP_RS04715 IPR012338 Beta-lactamase/transpeptidase-like YP_RS04730 IPR001702 Porin, Gram-negative type YP_RS04730 IPR001897 Porin, gammaproteobacterial YP_RS04730 IPR013793 Porin, Gram-negative type, conserved site YP_RS04730 IPR023614 Porin domain YP_RS04740 IPR011701 Major facilitator superfamily YP_RS04740 IPR020846 Major facilitator superfamily domain YP_RS04745 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS04750 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YP_RS04750 IPR032306 YP_RS04750 YP_RS04755 IPR000792 Transcription regulator LuxR, C-terminal YP_RS04755 IPR001789 Signal transduction response regulator, receiver domain YP_RS04755 IPR011006 CheY-like superfamily YP_RS04755 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS04755 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS04755 IPR030864 YP_RS04755 YP_RS04760 IPR001789 Signal transduction response regulator, receiver domain YP_RS04760 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS04760 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS04760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS04760 IPR011006 CheY-like superfamily YP_RS04760 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YP_RS04760 IPR030856 YP_RS04760 YP_RS04770 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YP_RS04770 IPR005743 DNA gyrase, subunit A YP_RS04770 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YP_RS04770 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain YP_RS04770 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YP_RS04770 IPR013760 DNA topoisomerase, type IIA-like domain YP_RS04770 IPR024946 Arginine repressor C-terminal-like domain YP_RS04775 IPR010233 Ubiquinone biosynthesis O-methyltransferase YP_RS04775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS04780 IPR000788 Ribonucleotide reductase large subunit, C-terminal YP_RS04780 IPR005144 ATP-cone YP_RS04780 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YP_RS04780 IPR013346 Ribonucleotide reductase, class I , alpha subunit YP_RS04780 IPR013509 Ribonucleotide reductase large subunit, N-terminal YP_RS04785 IPR000358 Ribonucleotide reductase small subunit YP_RS04785 IPR009078 Ferritin-like superfamily YP_RS04785 IPR012348 Ribonucleotide reductase-related YP_RS04785 IPR030475 YP_RS04785 YP_RS04790 IPR001041 2Fe-2S ferredoxin-type domain YP_RS04790 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YP_RS04790 IPR012675 Beta-grasp domain YP_RS04795 IPR005658 Proteinase inhibitor I11, ecotin YP_RS04795 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YP_RS04795 IPR023189 Proteinase inhibitor I11, ecotin domain YP_RS04795 IPR027438 Ecotin, C-terminal YP_RS04800 IPR001453 Molybdopterin binding domain YP_RS04800 IPR008135 Competence-induced protein CinA YP_RS04805 IPR002091 Aromatic amino acid permease YP_RS04805 IPR013059 Tryptophan/tyrosine transporter YP_RS04805 IPR013061 Tryptophan/tryrosine permease, conserved site YP_RS04805 IPR018227 Tryptophan/tyrosine permease YP_RS04810 IPR009998 YfaZ YP_RS04810 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS04810 IPR023614 Porin domain YP_RS04815 IPR010582 Catalase immune-responsive domain YP_RS04815 IPR011614 Catalase core domain YP_RS04815 IPR018028 Catalase, mono-functional, haem-containing YP_RS04815 IPR020835 Catalase-like domain YP_RS04815 IPR024708 Catalase active site YP_RS04815 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YP_RS04820 IPR006554 Helicase-like, DEXD box c2 type YP_RS04820 IPR006555 ATP-dependent helicase, C-terminal YP_RS04820 IPR010614 DEAD2 YP_RS04820 IPR011545 DEAD/DEAH box helicase domain YP_RS04820 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04825 IPR001702 Porin, Gram-negative type YP_RS04825 IPR001897 Porin, gammaproteobacterial YP_RS04825 IPR013793 Porin, Gram-negative type, conserved site YP_RS04825 IPR023614 Porin domain YP_RS04830 IPR000620 Drug/metabolite transporter YP_RS04840 IPR000310 Orn/Lys/Arg decarboxylase, major domain YP_RS04840 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YP_RS04840 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YP_RS04840 IPR011193 Ornithine/lysine/arginine decarboxylase YP_RS04840 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS04840 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS04840 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS04845 IPR002293 Amino acid/polyamine transporter I YP_RS04850 IPR000515 MetI-like domain YP_RS04855 IPR003439 ABC transporter-like YP_RS04855 IPR003593 AAA+ ATPase domain YP_RS04855 IPR017871 ABC transporter, conserved site YP_RS04855 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04860 IPR000515 MetI-like domain YP_RS04860 IPR001991 Sodium:dicarboxylate symporter YP_RS04865 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YP_RS04870 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YP_RS04875 IPR001307 Thiosulphate sulfurtransferase, conserved site YP_RS04875 IPR001763 Rhodanese-like domain YP_RS04880 IPR002129 Pyridoxal phosphate-dependent decarboxylase YP_RS04880 IPR010977 Aromatic-L-amino-acid decarboxylase YP_RS04880 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS04880 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS04880 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS04885 IPR005123 Oxoglutarate/iron-dependent dioxygenase YP_RS04885 IPR016946 Uncharacterised conserved protein UCP030125 YP_RS04890 IPR003439 ABC transporter-like YP_RS04890 IPR003593 AAA+ ATPase domain YP_RS04890 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YP_RS04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04895 IPR003439 ABC transporter-like YP_RS04895 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YP_RS04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04895 IPR032823 YP_RS04895 YP_RS04900 IPR001851 ABC transporter, permease YP_RS04900 IPR017778 ABC transporter, urea, permease protein, UrtC YP_RS04905 IPR001851 ABC transporter, permease YP_RS04905 IPR011989 Armadillo-like helical YP_RS04905 IPR016024 Armadillo-type fold YP_RS04905 IPR017779 ABC transporter, urea, permease protein, UrtB YP_RS04910 IPR000709 Leu/Ile/Val-binding protein YP_RS04910 IPR017777 ABC transporter, urea, substrate-binding, UrtA YP_RS04910 IPR028082 Periplasmic binding protein-like I YP_RS04915 IPR009921 Domain of unknown function DUF1456 YP_RS04920 IPR000515 MetI-like domain YP_RS04920 IPR005769 ABC transporter, permease PhnE/PtxC YP_RS04925 IPR000515 MetI-like domain YP_RS04925 IPR005769 ABC transporter, permease PhnE/PtxC YP_RS04930 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein YP_RS04930 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein YP_RS04935 IPR003439 ABC transporter-like YP_RS04935 IPR003593 AAA+ ATPase domain YP_RS04935 IPR012693 ABC transporter, phosphonate import, PhnC YP_RS04935 IPR017871 ABC transporter, conserved site YP_RS04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS04940 IPR007341 Transglycosylase-associated protein YP_RS04945 IPR020941 Suppressor of fused-like domain YP_RS04950 IPR002711 HNH endonuclease YP_RS04950 IPR003615 HNH nuclease YP_RS04955 IPR008173 Adenylyl cyclase CyaB YP_RS04955 IPR023577 CYTH-like domain YP_RS04955 IPR033469 YP_RS04955 YP_RS04960 IPR006094 FAD linked oxidase, N-terminal YP_RS04960 IPR012256 D-lactate dehydrogenase YP_RS04960 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YP_RS04960 IPR016164 FAD-linked oxidase-like, C-terminal YP_RS04960 IPR016166 FAD-binding, type 2 YP_RS04960 IPR016167 FAD-binding, type 2, subdomain 1 YP_RS04960 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS04960 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YP_RS04960 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YP_RS04965 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YP_RS04965 IPR012338 Beta-lactamase/transpeptidase-like YP_RS04965 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YP_RS04975 IPR001269 tRNA-dihydrouridine synthase YP_RS04975 IPR013785 Aldolase-type TIM barrel YP_RS04975 IPR018517 tRNA-dihydrouridine synthase, conserved site YP_RS04975 IPR032886 YP_RS04975 YP_RS04980 IPR025164 Domain of unknown function DUF4097 YP_RS04985 IPR002686 Transposase IS200-like YP_RS04995 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YP_RS04995 IPR001650 Helicase, C-terminal YP_RS04995 IPR011545 DEAD/DEAH box helicase domain YP_RS04995 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05000 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YP_RS05005 IPR001207 Transposase, mutator type YP_RS05030 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YP_RS05030 IPR001650 Helicase, C-terminal YP_RS05030 IPR011545 DEAD/DEAH box helicase domain YP_RS05030 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05030 IPR028622 ATP-dependent RNA helicase RhlE YP_RS05035 IPR001647 DNA-binding HTH domain, TetR-type YP_RS05035 IPR009057 Homeodomain-like YP_RS05035 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YP_RS05035 IPR015292 Transcription regulator YbiH, C-terminal YP_RS05035 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS05035 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YP_RS05040 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YP_RS05040 IPR032317 YP_RS05040 YP_RS05045 IPR003439 ABC transporter-like YP_RS05045 IPR003593 AAA+ ATPase domain YP_RS05045 IPR017871 ABC transporter, conserved site YP_RS05045 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05055 IPR000412 ABC-2 transporter YP_RS05060 IPR009799 EthD domain YP_RS05060 IPR011008 Dimeric alpha-beta barrel YP_RS05070 IPR000847 Transcription regulator HTH, LysR YP_RS05070 IPR005119 LysR, substrate-binding YP_RS05070 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS05075 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_RS05075 IPR013785 Aldolase-type TIM barrel YP_RS05080 IPR001789 Signal transduction response regulator, receiver domain YP_RS05080 IPR002078 RNA polymerase sigma factor 54 interaction domain YP_RS05080 IPR002197 DNA binding HTH domain, Fis-type YP_RS05080 IPR003593 AAA+ ATPase domain YP_RS05080 IPR009057 Homeodomain-like YP_RS05080 IPR011006 CheY-like superfamily YP_RS05080 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YP_RS05080 IPR025944 Sigma-54 interaction domain, conserved site YP_RS05080 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05085 IPR000014 PAS domain YP_RS05085 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS05085 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS05085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS05085 IPR013767 PAS fold YP_RS05085 IPR029151 Periplasmic sensor domain-like YP_RS05085 IPR033463 YP_RS05085 YP_RS05090 IPR020365 Zinc resistance-associated protein, ZraP YP_RS05090 IPR025961 Heavy-metal resistance protein YP_RS05095 IPR020846 Major facilitator superfamily domain YP_RS05100 IPR002686 Transposase IS200-like YP_RS05105 IPR020846 Major facilitator superfamily domain YP_RS05110 IPR000845 Nucleoside phosphorylase domain YP_RS05110 IPR001369 PNP/MTAP phosphorylase YP_RS05110 IPR010943 Xanthosine phosphorylase YP_RS05110 IPR011268 Purine nucleoside phosphorylase YP_RS05110 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific YP_RS05115 IPR000620 Drug/metabolite transporter YP_RS05120 IPR000847 Transcription regulator HTH, LysR YP_RS05120 IPR005119 LysR, substrate-binding YP_RS05120 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS05125 IPR000060 BCCT transporter family YP_RS05125 IPR018093 BCCT transporter, conserved site YP_RS05130 IPR001647 DNA-binding HTH domain, TetR-type YP_RS05130 IPR009057 Homeodomain-like YP_RS05130 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YP_RS05130 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS05130 IPR017757 Transcriptional repressor BetI YP_RS05130 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YP_RS05135 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase YP_RS05135 IPR015590 Aldehyde dehydrogenase domain YP_RS05135 IPR016160 Aldehyde dehydrogenase, cysteine active site YP_RS05135 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS05135 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS05135 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS05135 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YP_RS05140 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YP_RS05140 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YP_RS05140 IPR011533 Oxygen-dependent choline dehydrogenase YP_RS05140 IPR012132 Glucose-methanol-choline oxidoreductase YP_RS05140 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS05145 IPR002686 Transposase IS200-like YP_RS05155 IPR006214 Bax inhibitor 1-related YP_RS05160 IPR003448 Molybdopterin biosynthesis MoaE YP_RS05165 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YP_RS05165 IPR010034 Molybdopterin converting factor, subunit 1 YP_RS05165 IPR012675 Beta-grasp domain YP_RS05165 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YP_RS05170 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YP_RS05170 IPR023045 Molybdenum cofactor biosynthesis C YP_RS05170 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type YP_RS05175 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YP_RS05175 IPR006638 Elongator protein 3/MiaB/NifB YP_RS05175 IPR007197 Radical SAM YP_RS05175 IPR010505 Molybdenum cofactor synthesis C-terminal YP_RS05175 IPR013483 Molybdenum cofactor biosynthesis protein A YP_RS05175 IPR013785 Aldolase-type TIM barrel YP_RS05185 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YP_RS05185 IPR010119 Gluconeogenesis factor YP_RS05190 IPR003034 SAP domain YP_RS05190 IPR018668 Protein of unknown function DUF2132 YP_RS05195 IPR001650 Helicase, C-terminal YP_RS05195 IPR001943 UVR domain YP_RS05195 IPR004807 UvrABC system, subunit B YP_RS05195 IPR006935 Helicase/UvrB domain YP_RS05195 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS05195 IPR024759 UvrB, YAD/RRR-motif-containing domain YP_RS05195 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05200 IPR003439 ABC transporter-like YP_RS05200 IPR003593 AAA+ ATPase domain YP_RS05200 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05205 IPR004472 Dethiobiotin synthase BioD YP_RS05205 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05210 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YP_RS05210 IPR013216 Methyltransferase type 11 YP_RS05210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS05215 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YP_RS05215 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YP_RS05215 IPR004839 Aminotransferase, class I/classII YP_RS05215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS05215 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS05215 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS05215 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YP_RS05220 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YP_RS05220 IPR006638 Elongator protein 3/MiaB/NifB YP_RS05220 IPR007197 Radical SAM YP_RS05220 IPR010722 Biotin and thiamin synthesis-associated domain YP_RS05220 IPR013785 Aldolase-type TIM barrel YP_RS05220 IPR024177 Biotin synthase YP_RS05225 IPR005814 Aminotransferase class-III YP_RS05225 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YP_RS05225 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS05225 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS05225 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS05230 IPR011045 Nitrous oxide reductase, N-terminal YP_RS05230 IPR015943 WD40/YVTN repeat-like-containing domain YP_RS05230 IPR019405 Lactonase, 7-bladed beta propeller YP_RS05230 IPR022528 6-phosphogluconolactonase, YbhE-type YP_RS05235 IPR000150 Cof protein YP_RS05235 IPR006379 HAD-superfamily hydrolase, subfamily IIB YP_RS05235 IPR023214 HAD-like domain YP_RS05240 IPR003439 ABC transporter-like YP_RS05240 IPR003593 AAA+ ATPase domain YP_RS05240 IPR004606 Molybdenum-pterin binding YP_RS05240 IPR005116 Transport-associated OB, type 1 YP_RS05240 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS05240 IPR011868 Molybdate ABC transporter, ATP-binding protein YP_RS05240 IPR017871 ABC transporter, conserved site YP_RS05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05245 IPR000515 MetI-like domain YP_RS05245 IPR011867 Molybdate ABC transporter, permease protein YP_RS05250 IPR005950 Molybdenum ABC transporter, periplasmic binding protein YP_RS05255 IPR019702 Protein of unknown function DUF2592 YP_RS05260 IPR000847 Transcription regulator HTH, LysR YP_RS05260 IPR003725 Molybdenum-binding protein, N-terminal YP_RS05260 IPR004606 Molybdenum-pterin binding YP_RS05260 IPR005116 Transport-associated OB, type 1 YP_RS05260 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS05260 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS05260 IPR016462 Molybdate-dependent transcriptional regulator, ModE YP_RS05265 IPR003439 ABC transporter-like YP_RS05265 IPR003593 AAA+ ATPase domain YP_RS05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05275 IPR003675 CAAX amino terminal protease YP_RS05280 IPR005886 UDP-glucose 4-epimerase GalE YP_RS05280 IPR016040 NAD(P)-binding domain YP_RS05285 IPR001937 Galactose-1-phosphate uridyl transferase, class I YP_RS05285 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YP_RS05285 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YP_RS05285 IPR011146 HIT-like domain YP_RS05285 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YP_RS05290 IPR000705 Galactokinase YP_RS05290 IPR006203 GHMP kinase, ATP-binding, conserved site YP_RS05290 IPR006204 GHMP kinase N-terminal domain YP_RS05290 IPR006206 Mevalonate/galactokinase YP_RS05290 IPR013750 GHMP kinase, C-terminal domain YP_RS05290 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS05290 IPR019539 Galactokinase galactose-binding domain YP_RS05290 IPR019741 Galactokinase, conserved site YP_RS05290 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS05290 IPR022963 Galactokinase, bacterial YP_RS05300 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YP_RS05300 IPR011013 Galactose mutarotase-like domain YP_RS05300 IPR013458 Aldose 1-epimerase, bacterial YP_RS05300 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YP_RS05300 IPR015443 Aldose 1-epimerase YP_RS05300 IPR018052 Aldose 1-epimerase, conserved site YP_RS05305 IPR011690 Phosphate-starvation-induced PsiF repeat YP_RS05310 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YP_RS05310 IPR005952 Phosphoglycerate mutase 1 YP_RS05310 IPR013078 Histidine phosphatase superfamily, clade-1 YP_RS05310 IPR029033 Histidine phosphatase superfamily YP_RS05315 IPR006218 DAHP synthetase I/KDSA YP_RS05315 IPR006219 DHAP synthase, class 1 YP_RS05315 IPR013785 Aldolase-type TIM barrel YP_RS05320 IPR002524 Cation efflux protein YP_RS05320 IPR023500 Zinc transporter ZitB YP_RS05320 IPR027469 Cation efflux protein transmembrane domain YP_RS05325 IPR006419 Nicotinamide mononucleotide transporter PnuC YP_RS05330 IPR003473 Quinolinate synthetase A YP_RS05330 IPR023513 Quinolinate synthase A, type 1 YP_RS05355 IPR011990 Tetratricopeptide-like helical domain YP_RS05355 IPR014162 Tol-Pal system, YbgF YP_RS05355 IPR032519 YP_RS05355 YP_RS05360 IPR006664 Outer membrane protein, bacterial YP_RS05360 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS05360 IPR006690 Outer membrane protein, OmpA-like, conserved site YP_RS05360 IPR014169 Peptidoglycan-associated lipoprotein YP_RS05365 IPR007195 TolB, N-terminal YP_RS05365 IPR011659 WD40-like Beta Propeller YP_RS05365 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB YP_RS05365 IPR015943 WD40/YVTN repeat-like-containing domain YP_RS05370 IPR014161 Tol-Pal system, TolA YP_RS05375 IPR003400 Biopolymer transport protein ExbD/TolR YP_RS05375 IPR014168 Biopolymer transport, TolR YP_RS05380 IPR002898 MotA/TolQ/ExbB proton channel YP_RS05380 IPR014163 Tol-Pal system, TolQ YP_RS05385 IPR006683 Thioesterase superfamily YP_RS05385 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YP_RS05385 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase YP_RS05385 IPR029069 HotDog domain YP_RS05390 IPR011846 Cyd operon protein YbgE YP_RS05395 IPR011724 Cyd operon protein YbgT YP_RS05395 IPR012994 Membrane bound YbgT-like YP_RS05400 IPR003317 Cytochrome d ubiquinol oxidase, subunit II YP_RS05405 IPR002585 Cytochrome d ubiquinol oxidase, subunit I YP_RS05410 IPR003781 CoA-binding YP_RS05410 IPR005810 Succinyl-CoA ligase, alpha subunit YP_RS05410 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YP_RS05410 IPR016040 NAD(P)-binding domain YP_RS05410 IPR016102 Succinyl-CoA synthetase-like YP_RS05410 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YP_RS05415 IPR005809 Succinyl-CoA synthetase, beta subunit YP_RS05415 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YP_RS05415 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YP_RS05415 IPR013815 ATP-grasp fold, subdomain 1 YP_RS05415 IPR013816 ATP-grasp fold, subdomain 2 YP_RS05415 IPR016102 Succinyl-CoA synthetase-like YP_RS05415 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YP_RS05420 IPR000089 Biotin/lipoyl attachment YP_RS05420 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YP_RS05420 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YP_RS05420 IPR004167 E3 binding YP_RS05420 IPR006255 Dihydrolipoamide succinyltransferase YP_RS05420 IPR011053 Single hybrid motif YP_RS05420 IPR023213 Chloramphenicol acetyltransferase-like domain YP_RS05425 IPR001017 Dehydrogenase, E1 component YP_RS05425 IPR005475 Transketolase-like, pyrimidine-binding domain YP_RS05425 IPR011603 2-oxoglutarate dehydrogenase E1 component YP_RS05425 IPR029061 Thiamin diphosphate-binding fold YP_RS05425 IPR031717 YP_RS05425 YP_RS05425 IPR032106 YP_RS05425 YP_RS05430 IPR001041 2Fe-2S ferredoxin-type domain YP_RS05430 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YP_RS05430 IPR009051 Alpha-helical ferredoxin YP_RS05430 IPR012675 Beta-grasp domain YP_RS05430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS05430 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YP_RS05435 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YP_RS05435 IPR003953 FAD binding domain YP_RS05435 IPR011281 Succinate dehydrogenase, flavoprotein subunit YP_RS05435 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_RS05435 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YP_RS05435 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS05435 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YP_RS05435 IPR030664 YP_RS05435 YP_RS05440 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YP_RS05445 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit YP_RS05445 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit YP_RS05445 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site YP_RS05450 IPR002020 Citrate synthase-like YP_RS05450 IPR010953 Citrate synthase, type I YP_RS05450 IPR016142 Citrate synthase-like, large alpha subdomain YP_RS05450 IPR016143 Citrate synthase-like, small alpha subdomain YP_RS05450 IPR019810 Citrate synthase active site YP_RS05450 IPR024176 Citrate synthase, bacterial-type YP_RS05455 IPR000740 GrpE nucleotide exchange factor YP_RS05455 IPR009012 GrpE nucleotide exchange factor, head YP_RS05455 IPR013805 GrpE nucleotide exchange factor, coiled-coil YP_RS05460 IPR002504 Inorganic polyphosphate/ATP-NAD kinase YP_RS05460 IPR016064 ATP-NAD kinase-like domain YP_RS05460 IPR017437 ATP-NAD kinase, PpnK-type, all-beta YP_RS05460 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 YP_RS05465 IPR003395 RecF/RecN/SMC, N-terminal YP_RS05465 IPR004604 DNA recombination/repair protein RecN YP_RS05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05470 IPR007450 Lipoprotein SmpA/OmlA YP_RS05470 IPR026592 Outer membrane protein assembly factor BamE YP_RS05475 IPR005346 RnfH protein YP_RS05475 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YP_RS05480 IPR005031 Streptomyces cyclase/dehydrase YP_RS05480 IPR023393 START-like domain YP_RS05485 IPR000037 SsrA-binding protein YP_RS05485 IPR020081 SsrA-binding protein, conserved site YP_RS05485 IPR023620 Small protein B YP_RS05495 IPR002686 Transposase IS200-like YP_RS05500 IPR002104 Integrase, catalytic YP_RS05500 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS05500 IPR013762 Integrase-like, catalytic core YP_RS05500 IPR023109 Integrase/recombinase, N-terminal YP_RS05500 IPR025166 Domain of unknown function DUF4102 YP_RS05505 IPR025382 Domain of unknown function DUF4297 YP_RS05530 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS05530 IPR013762 Integrase-like, catalytic core YP_RS05530 IPR023109 Integrase/recombinase, N-terminal YP_RS05530 IPR024456 Integrase catalytic domain, putative YP_RS05530 IPR024457 Putative integrase, N-terminal YP_RS05535 IPR010260 Bacteriophage P4, Orf88 YP_RS05540 IPR018880 Bacteriophage P4, Ash protein YP_RS05545 IPR002694 Zinc finger, CHC2-type YP_RS05545 IPR006171 Toprim domain YP_RS05545 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YP_RS05550 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05555 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS05555 IPR014057 Addiction module antidote protein, HI1420 YP_RS05560 IPR009241 Addiction module killer protein YP_RS05560 IPR014056 Addiction module killer protein, predicted YP_RS05570 IPR001584 Integrase, catalytic core YP_RS05570 IPR006120 Resolvase, HTH domain YP_RS05570 IPR009057 Homeodomain-like YP_RS05570 IPR012337 Ribonuclease H-like domain YP_RS05575 IPR001270 ClpA/B family YP_RS05575 IPR002611 IstB-like ATP-binding protein YP_RS05575 IPR003593 AAA+ ATPase domain YP_RS05575 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05575 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS05580 IPR023109 Integrase/recombinase, N-terminal YP_RS05580 IPR025166 Domain of unknown function DUF4102 YP_RS05585 IPR002514 Transposase IS3/IS911family YP_RS05585 IPR009057 Homeodomain-like YP_RS05600 IPR000073 Alpha/beta hydrolase fold-1 YP_RS05600 IPR029058 Alpha/Beta hydrolase fold YP_RS05610 IPR002145 Ribbon-helix-helix protein, copG YP_RS05615 IPR001226 Flavodoxin, conserved site YP_RS05615 IPR008254 Flavodoxin/nitric oxide synthase YP_RS05615 IPR010086 Flavodoxin, long chain YP_RS05615 IPR029039 Flavoprotein-like YP_RS05620 IPR002481 Ferric-uptake regulator YP_RS05620 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS05630 IPR005318 Outer membrane porin, bacterial YP_RS05630 IPR023614 Porin domain YP_RS05635 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YP_RS05635 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS05635 IPR004514 Glutamine-tRNA synthetase YP_RS05635 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YP_RS05635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS05635 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YP_RS05635 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YP_RS05635 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YP_RS05635 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain YP_RS05635 IPR022861 Glutamine-tRNA ligase, bacterial YP_RS05640 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YP_RS05640 IPR001996 Phosphotransferase system, IIB component, type 1 YP_RS05640 IPR003352 Phosphotransferase system, EIIC YP_RS05640 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YP_RS05640 IPR011055 Duplicated hybrid motif YP_RS05640 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YP_RS05645 IPR004547 Glucosamine-6-phosphate isomerase YP_RS05645 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YP_RS05645 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YP_RS05650 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YP_RS05650 IPR006680 Amidohydrolase 1 YP_RS05650 IPR011059 Metal-dependent hydrolase, composite domain YP_RS05650 IPR032466 YP_RS05650 YP_RS05655 IPR000600 ROK YP_RS05655 IPR000835 MarR-type HTH domain YP_RS05655 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS05665 IPR001962 Asparagine synthase YP_RS05665 IPR006426 Asparagine synthase, glutamine-hydrolyzing YP_RS05665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS05665 IPR017932 Glutamine amidotransferase type 2 domain YP_RS05665 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS05705 IPR002938 Monooxygenase, FAD-binding YP_RS05705 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YP_RS05705 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS05710 IPR002792 TRAM domain YP_RS05710 IPR005839 Methylthiotransferase YP_RS05710 IPR006463 tRNA-i(6)A37 modification enzyme MiaB YP_RS05710 IPR006638 Elongator protein 3/MiaB/NifB YP_RS05710 IPR007197 Radical SAM YP_RS05710 IPR013848 Methylthiotransferase, N-terminal YP_RS05710 IPR020612 Methylthiotransferase, conserved site YP_RS05710 IPR023404 Radical SAM, alpha/beta horseshoe YP_RS05710 IPR023970 Methylthiotransferase/radical SAM-type protein YP_RS05715 IPR003714 PhoH-like protein YP_RS05715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05720 IPR002036 Endoribonuclease YbeY YP_RS05720 IPR020549 Endoribonuclease YbeY, conserved site YP_RS05720 IPR023091 Metalloprotease catalytic domain, predicted YP_RS05725 IPR000644 CBS domain YP_RS05725 IPR005170 Transporter-associated domain YP_RS05725 IPR016166 FAD-binding, type 2 YP_RS05725 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS05730 IPR003010 Carbon-nitrogen hydrolase YP_RS05730 IPR004563 Apolipoprotein N-acyltransferase YP_RS05735 IPR001638 Extracellular solute-binding protein, family 3 YP_RS05740 IPR000515 MetI-like domain YP_RS05740 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS05740 IPR030202 YP_RS05740 YP_RS05745 IPR000515 MetI-like domain YP_RS05745 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS05745 IPR030205 YP_RS05745 YP_RS05750 IPR003439 ABC transporter-like YP_RS05750 IPR003593 AAA+ ATPase domain YP_RS05750 IPR017871 ABC transporter, conserved site YP_RS05750 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05750 IPR030206 YP_RS05750 YP_RS05750 IPR030679 YP_RS05750 YP_RS05755 IPR009912 Protein of unknown function DUF1451 YP_RS05760 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS05760 IPR002300 Aminoacyl-tRNA synthetase, class Ia YP_RS05760 IPR002302 Leucine-tRNA ligase YP_RS05760 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YP_RS05760 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YP_RS05760 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YP_RS05760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS05760 IPR025709 Leucyl-tRNA synthetase, editing domain YP_RS05765 IPR007485 Lipopolysaccharide assembly, LptE YP_RS05770 IPR005790 DNA polymerase III, delta subunit YP_RS05770 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YP_RS05770 IPR010372 DNA polymerase III, delta YP_RS05770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05770 IPR032780 YP_RS05770 YP_RS05775 IPR004821 Cytidyltransferase-like domain YP_RS05775 IPR005248 Probable nicotinate-nucleotide adenylyltransferase YP_RS05775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS05780 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YP_RS05785 IPR003742 SPOUT methyltransferase, predicted YP_RS05785 IPR016051 Ribosomal RNA large subunit methyltransferase H YP_RS05785 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS05785 IPR029028 Alpha/beta knot methyltransferases YP_RS05790 IPR001460 Penicillin-binding protein, transpeptidase YP_RS05790 IPR005311 Penicillin-binding protein, dimerisation domain YP_RS05790 IPR012338 Beta-lactamase/transpeptidase-like YP_RS05790 IPR017790 Penicillin-binding protein 2 YP_RS05795 IPR001182 Cell cycle protein FtsW/RodA YP_RS05795 IPR011923 Rod shape-determining protein RodA YP_RS05795 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YP_RS05800 IPR007730 Sporulation-related domain YP_RS05800 IPR009009 RlpA-like double-psi beta-barrel domain YP_RS05800 IPR012997 Rare lipoprotein A, bacterial YP_RS05805 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YP_RS05805 IPR012338 Beta-lactamase/transpeptidase-like YP_RS05805 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YP_RS05805 IPR015956 Penicillin-binding protein-associated YP_RS05805 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YP_RS05810 IPR007454 Uncharacterised protein family UPF0250 YP_RS05810 IPR027471 YbeD-like domain YP_RS05815 IPR000544 Octanoyltransferase YP_RS05815 IPR004143 Biotin/lipoate A/B protein ligase YP_RS05815 IPR020605 Octanoyltransferase, conserved site YP_RS05820 IPR003698 Lipoyl synthase YP_RS05820 IPR006638 Elongator protein 3/MiaB/NifB YP_RS05820 IPR007197 Radical SAM YP_RS05820 IPR013785 Aldolase-type TIM barrel YP_RS05820 IPR031691 YP_RS05820 YP_RS05825 IPR003369 Sec-independent protein translocase protein TatA/B/E YP_RS05825 IPR006312 Sec-independent protein translocase protein TatA/E YP_RS05825 IPR024905 Sec-independent protein translocase protein TatE YP_RS05835 IPR003691 Putative fluoride ion transporter CrcB YP_RS05840 IPR002059 Cold-shock protein, DNA-binding YP_RS05840 IPR011129 Cold shock protein YP_RS05840 IPR012156 Cold shock, CspA YP_RS05840 IPR012340 Nucleic acid-binding, OB-fold YP_RS05840 IPR019844 Cold-shock conserved site YP_RS05845 IPR002059 Cold-shock protein, DNA-binding YP_RS05845 IPR012340 Nucleic acid-binding, OB-fold YP_RS05850 IPR000792 Transcription regulator LuxR, C-terminal YP_RS05850 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS05850 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS05865 IPR009052 DNA polymerase III-theta, bacterial YP_RS05865 IPR011326 Homologue of theta DNA polymerase III YP_RS05865 IPR015065 Glycogen synthesis protein YP_RS05870 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YP_RS05870 IPR011008 Dimeric alpha-beta barrel YP_RS05875 IPR003439 ABC transporter-like YP_RS05875 IPR003593 AAA+ ATPase domain YP_RS05875 IPR011527 ABC transporter type 1, transmembrane domain YP_RS05875 IPR017871 ABC transporter, conserved site YP_RS05875 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05885 IPR011051 RmlC-like cupin domain YP_RS05885 IPR014710 RmlC-like jelly roll fold YP_RS05885 IPR021120 KduI/IolB isomerase YP_RS05885 IPR024203 5-deoxy-glucuronate isomerase, IolB YP_RS05890 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS05890 IPR030823 YP_RS05890 YP_RS05895 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YP_RS05895 IPR011611 Carbohydrate kinase PfkB YP_RS05895 IPR018659 Protein of unknown function DUF2090 YP_RS05895 IPR029056 Ribokinase-like YP_RS05895 IPR030830 YP_RS05895 YP_RS05900 IPR000683 Oxidoreductase, N-terminal YP_RS05900 IPR004104 Oxidoreductase, C-terminal YP_RS05900 IPR016040 NAD(P)-binding domain YP_RS05905 IPR001851 ABC transporter, permease YP_RS05910 IPR003439 ABC transporter-like YP_RS05910 IPR003593 AAA+ ATPase domain YP_RS05910 IPR017871 ABC transporter, conserved site YP_RS05910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS05915 IPR025997 Periplasmic binding protein domain YP_RS05915 IPR028082 Periplasmic binding protein-like I YP_RS05925 IPR000399 TPP-binding enzyme, conserved site YP_RS05925 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_RS05925 IPR012000 Thiamine pyrophosphate enzyme, central domain YP_RS05925 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YP_RS05925 IPR029035 DHS-like NAD/FAD-binding domain YP_RS05925 IPR029061 Thiamin diphosphate-binding fold YP_RS05925 IPR030817 YP_RS05925 YP_RS05930 IPR010061 Methylmalonate-semialdehyde dehydrogenase YP_RS05930 IPR015590 Aldehyde dehydrogenase domain YP_RS05930 IPR016160 Aldehyde dehydrogenase, cysteine active site YP_RS05930 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS05930 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS05930 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS05935 IPR000281 Helix-turn-helix protein RpiR YP_RS05935 IPR001347 Sugar isomerase (SIS) YP_RS05935 IPR009057 Homeodomain-like YP_RS05935 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS05940 IPR009898 Protein of unknown function DUF1440 YP_RS05945 IPR001599 Alpha-2-macroglobulin YP_RS05945 IPR002890 Alpha-2-macroglobulin, N-terminal YP_RS05945 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YP_RS05945 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YP_RS05945 IPR021868 Alpha-2-macroglobulin MG1 domain YP_RS05950 IPR001264 Glycosyl transferase, family 51 YP_RS05950 IPR001460 Penicillin-binding protein, transpeptidase YP_RS05950 IPR009647 Penicillin-binding, C-terminal YP_RS05950 IPR011815 Penicillin-binding protein 1C YP_RS05950 IPR012338 Beta-lactamase/transpeptidase-like YP_RS05950 IPR023346 Lysozyme-like domain YP_RS05955 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS05970 IPR010665 Protein of unknown function DUF1240 YP_RS05975 IPR010665 Protein of unknown function DUF1240 YP_RS05980 IPR008514 Type VI secretion system effector, Hcp YP_RS05995 IPR003991 Pertactin virulence factor family YP_RS05995 IPR004899 Pertactin, central region YP_RS05995 IPR005546 Autotransporter beta-domain YP_RS05995 IPR006315 Outer membrane autotransporter barrel YP_RS05995 IPR011050 Pectin lyase fold/virulence factor YP_RS05995 IPR012332 P22 tailspike C-terminal domain-like YP_RS06000 IPR021561 Protein of unknown function DUF2893 YP_RS06000 IPR033455 YP_RS06000 YP_RS06010 IPR001207 Transposase, mutator type YP_RS06015 IPR018677 Protein of unknown function DUF2157, membrane YP_RS06015 IPR025513 Domain of unknown function DUF4401 YP_RS06020 IPR025833 GDYXXLXY protein YP_RS06025 IPR001764 Glycoside hydrolase, family 3, N-terminal YP_RS06025 IPR002772 Glycoside hydrolase family 3 C-terminal domain YP_RS06025 IPR017853 Glycoside hydrolase, superfamily YP_RS06025 IPR019800 Glycoside hydrolase, family 3, active site YP_RS06025 IPR026891 Fibronectin type III-like domain YP_RS06025 IPR026892 Glycoside hydrolase family 3 YP_RS06045 IPR001395 Aldo/keto reductase YP_RS06045 IPR018170 Aldo/keto reductase, conserved site YP_RS06045 IPR020471 Aldo/keto reductase subgroup YP_RS06045 IPR023210 NADP-dependent oxidoreductase domain YP_RS06050 IPR001395 Aldo/keto reductase YP_RS06050 IPR023210 NADP-dependent oxidoreductase domain YP_RS06055 IPR000847 Transcription regulator HTH, LysR YP_RS06055 IPR005119 LysR, substrate-binding YP_RS06055 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06060 IPR001584 Integrase, catalytic core YP_RS06060 IPR006120 Resolvase, HTH domain YP_RS06060 IPR009057 Homeodomain-like YP_RS06060 IPR012337 Ribonuclease H-like domain YP_RS06065 IPR001270 ClpA/B family YP_RS06065 IPR002611 IstB-like ATP-binding protein YP_RS06065 IPR003593 AAA+ ATPase domain YP_RS06065 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06065 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS06070 IPR014030 Beta-ketoacyl synthase, N-terminal YP_RS06070 IPR014031 Beta-ketoacyl synthase, C-terminal YP_RS06070 IPR016039 Thiolase-like YP_RS06070 IPR018201 Beta-ketoacyl synthase, active site YP_RS06070 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YP_RS06075 IPR002686 Transposase IS200-like YP_RS06085 IPR007040 Ribosome modulation factor YP_RS06085 IPR023200 Ribosome modulation factor-like domain YP_RS06095 IPR005586 Protein of unknown function DUF330 YP_RS06100 IPR003399 Mammalian cell entry-related YP_RS06105 IPR005219 Conserved hypothetical protein CHP00155 YP_RS06105 IPR007498 Paraquat-inducible protein A YP_RS06110 IPR003439 ABC transporter-like YP_RS06110 IPR003593 AAA+ ATPase domain YP_RS06110 IPR017871 ABC transporter, conserved site YP_RS06110 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06110 IPR032524 YP_RS06110 YP_RS06110 IPR032781 YP_RS06110 YP_RS06115 IPR000241 Putative RNA methylase domain YP_RS06115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS06115 IPR004114 THUMP YP_RS06115 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YP_RS06115 IPR019614 S-adenosylmethionine-dependent methyltransferase YP_RS06115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS06120 IPR001041 2Fe-2S ferredoxin-type domain YP_RS06120 IPR005302 Molybdenum cofactor sulfurase, C-terminal YP_RS06120 IPR005303 MOSC, N-terminal beta barrel YP_RS06120 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YP_RS06120 IPR011037 Pyruvate kinase-like, insert domain YP_RS06120 IPR012675 Beta-grasp domain YP_RS06125 IPR009809 Cell division protein ZapC YP_RS06130 IPR001295 Dihydroorotate dehydrogenase, conserved site YP_RS06130 IPR005719 Dihydroorotate dehydrogenase, class 2 YP_RS06130 IPR005720 Dihydroorotate dehydrogenase domain YP_RS06130 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YP_RS06130 IPR013785 Aldolase-type TIM barrel YP_RS06135 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YP_RS06135 IPR012779 Peptidase M1, alanyl aminopeptidase YP_RS06135 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal YP_RS06135 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YP_RS06140 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YP_RS06140 IPR006406 Nicotinate phosphoribosyltransferase YP_RS06140 IPR007229 Nicotinate phosphoribosyltransferase family YP_RS06145 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YP_RS06145 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YP_RS06145 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YP_RS06145 IPR004522 Asparagine-tRNA ligase YP_RS06145 IPR012340 Nucleic acid-binding, OB-fold YP_RS06145 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YP_RS06150 IPR001702 Porin, Gram-negative type YP_RS06150 IPR001897 Porin, gammaproteobacterial YP_RS06150 IPR013793 Porin, Gram-negative type, conserved site YP_RS06150 IPR023614 Porin domain YP_RS06155 IPR000796 Aspartate/other aminotransferase YP_RS06155 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YP_RS06155 IPR004839 Aminotransferase, class I/classII YP_RS06155 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS06155 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS06160 IPR001279 Beta-lactamase-like YP_RS06165 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YP_RS06165 IPR010275 Protein of unknown function DUF882 YP_RS06170 IPR002477 Peptidoglycan binding-like YP_RS06170 IPR005490 L,D-transpeptidase catalytic domain YP_RS06175 IPR002686 Transposase IS200-like YP_RS06185 IPR007406 MukB, N-terminal domain YP_RS06185 IPR009053 Prefoldin YP_RS06185 IPR012090 Chromosome partition protein MukB YP_RS06185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06185 IPR032520 YP_RS06185 YP_RS06190 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YP_RS06195 IPR005582 Chromosome partition protein MukF YP_RS06195 IPR010916 TonB box, conserved site YP_RS06195 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06195 IPR033439 YP_RS06195 YP_RS06195 IPR033440 YP_RS06195 YP_RS06195 IPR033441 YP_RS06195 YP_RS06200 IPR025714 Methyltransferase domain YP_RS06200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS06210 IPR011009 Protein kinase-like domain YP_RS06210 IPR016477 Fructosamine/Ketosamine-3-kinase YP_RS06215 IPR003329 Acylneuraminate cytidylyltransferase YP_RS06215 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_RS06215 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS06220 IPR005651 Uncharacterised protein family UPF0434/Trm112 YP_RS06225 IPR002059 Cold-shock protein, DNA-binding YP_RS06225 IPR011129 Cold shock protein YP_RS06225 IPR012156 Cold shock, CspA YP_RS06225 IPR012340 Nucleic acid-binding, OB-fold YP_RS06235 IPR009770 Domain of unknown function DUF1338 YP_RS06240 IPR003758 Tetraacyldisaccharide 4'-kinase YP_RS06240 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06245 IPR003439 ABC transporter-like YP_RS06245 IPR003593 AAA+ ATPase domain YP_RS06245 IPR011527 ABC transporter type 1, transmembrane domain YP_RS06245 IPR011917 ABC transporter, lipid A export, MsbA YP_RS06245 IPR017871 ABC transporter, conserved site YP_RS06245 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06250 IPR001279 Beta-lactamase-like YP_RS06250 IPR004477 ComEC/Rec2-related protein YP_RS06250 IPR004797 Competence protein ComEC/Rec2 YP_RS06250 IPR025405 Domain of unknown function DUF4131 YP_RS06260 IPR000119 Histone-like bacterial DNA-binding protein YP_RS06260 IPR005685 Integration host factor, beta subunit YP_RS06260 IPR010992 Integration host factor (IHF)-like DNA-binding domain YP_RS06260 IPR020816 Histone-like DNA-binding protein, conserved site YP_RS06265 IPR000110 Ribosomal protein S1 YP_RS06265 IPR003029 Ribosomal protein S1, RNA-binding domain YP_RS06265 IPR012340 Nucleic acid-binding, OB-fold YP_RS06265 IPR022967 RNA-binding domain, S1 YP_RS06270 IPR003136 Cytidylate kinase YP_RS06270 IPR011994 Cytidylate kinase domain YP_RS06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06275 IPR001986 Enolpyruvate transferase domain YP_RS06275 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YP_RS06275 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YP_RS06275 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YP_RS06280 IPR000192 Aminotransferase class V domain YP_RS06280 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS06280 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS06280 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS06280 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YP_RS06280 IPR022278 Phosphoserine aminotransferase YP_RS06285 IPR005594 YadA-like, C-terminal YP_RS06285 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS06290 IPR005594 YadA-like, C-terminal YP_RS06290 IPR008126 Outer membrane adhesion, Yersinia YP_RS06290 IPR008635 Coiled stalk of trimeric autotransporter adhesin YP_RS06290 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS06295 IPR004550 L-asparaginase, type II YP_RS06295 IPR006034 Asparaginase/glutaminase YP_RS06295 IPR020827 Asparaginase/glutaminase, active site 1 YP_RS06295 IPR027473 L-asparaginase, C-terminal domain YP_RS06295 IPR027474 L-asparaginase, N-terminal YP_RS06295 IPR027475 Asparaginase/glutaminase, active site 2 YP_RS06300 IPR003776 YcaO-like domain YP_RS06305 IPR000292 Formate/nitrite transporter YP_RS06305 IPR023271 Aquaporin-like YP_RS06305 IPR023999 Formate transporter FocA, putative YP_RS06305 IPR024002 Formate/nitrite transporter, conserved site YP_RS06310 IPR001150 Glycine radical domain YP_RS06310 IPR004184 Pyruvate formate lyase domain YP_RS06310 IPR005949 Formate acetyltransferase YP_RS06310 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YP_RS06315 IPR002654 Glycosyl transferase, family 25 YP_RS06320 IPR001989 Radical-activating enzyme, conserved site YP_RS06320 IPR007197 Radical SAM YP_RS06320 IPR012838 Pyruvate formate-lyase activating enzyme YP_RS06325 IPR011701 Major facilitator superfamily YP_RS06325 IPR020846 Major facilitator superfamily domain YP_RS06325 IPR023745 MSF-type transporter, YcaD YP_RS06330 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YP_RS06330 IPR002317 Serine-tRNA ligase, type1 YP_RS06330 IPR010978 tRNA-binding arm YP_RS06330 IPR015866 Serine-tRNA synthetase, type1, N-terminal YP_RS06335 IPR003593 AAA+ ATPase domain YP_RS06335 IPR003959 ATPase, AAA-type, core YP_RS06335 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YP_RS06335 IPR021886 MgsA AAA+ ATPase C-terminal YP_RS06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06335 IPR032423 YP_RS06335 YP_RS06340 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YP_RS06340 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YP_RS06340 IPR029046 Lipoprotein localisation LolA/LolB/LppX YP_RS06345 IPR002543 FtsK domain YP_RS06345 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06345 IPR018541 FtsK gamma domain YP_RS06345 IPR025199 Domain of unknown function DUF4117 YP_RS06345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06350 IPR000485 AsnC-type HTH domain YP_RS06350 IPR011008 Dimeric alpha-beta barrel YP_RS06350 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06350 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YP_RS06350 IPR019887 Transcription regulator AsnC-type, C-terminal YP_RS06350 IPR019888 Transcription regulator AsnC-type YP_RS06355 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II YP_RS06355 IPR005982 Thioredoxin reductase YP_RS06355 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YP_RS06355 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS06365 IPR003439 ABC transporter-like YP_RS06365 IPR003593 AAA+ ATPase domain YP_RS06365 IPR011527 ABC transporter type 1, transmembrane domain YP_RS06365 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YP_RS06365 IPR017871 ABC transporter, conserved site YP_RS06365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06370 IPR003439 ABC transporter-like YP_RS06370 IPR003593 AAA+ ATPase domain YP_RS06370 IPR011527 ABC transporter type 1, transmembrane domain YP_RS06370 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YP_RS06370 IPR017871 ABC transporter, conserved site YP_RS06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06375 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YP_RS06375 IPR016181 Acyl-CoA N-acyltransferase YP_RS06380 IPR004368 Translation initiation factor IF-1 YP_RS06380 IPR006196 RNA-binding domain, S1, IF1 type YP_RS06380 IPR012340 Nucleic acid-binding, OB-fold YP_RS06380 IPR022967 RNA-binding domain, S1 YP_RS06385 IPR002686 Transposase IS200-like YP_RS06390 IPR001270 ClpA/B family YP_RS06390 IPR003593 AAA+ ATPase domain YP_RS06390 IPR003959 ATPase, AAA-type, core YP_RS06390 IPR004176 Clp, N-terminal YP_RS06390 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YP_RS06390 IPR018368 ClpA/B, conserved site 1 YP_RS06390 IPR019489 Clp ATPase, C-terminal YP_RS06390 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06390 IPR028299 ClpA/B, conserved site 2 YP_RS06395 IPR003769 Adaptor protein ClpS, core YP_RS06395 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YP_RS06395 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YP_RS06400 IPR002059 Cold-shock protein, DNA-binding YP_RS06400 IPR011129 Cold shock protein YP_RS06400 IPR012340 Nucleic acid-binding, OB-fold YP_RS06400 IPR012751 CspD, cold shock YP_RS06400 IPR019844 Cold-shock conserved site YP_RS06405 IPR003439 ABC transporter-like YP_RS06405 IPR003593 AAA+ ATPase domain YP_RS06405 IPR003838 Permease FtsX-like YP_RS06405 IPR017871 ABC transporter, conserved site YP_RS06405 IPR025857 MacB-like periplasmic core domain YP_RS06405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06410 IPR006143 RND efflux pump, membrane fusion protein YP_RS06410 IPR030190 YP_RS06410 YP_RS06410 IPR032317 YP_RS06410 YP_RS06415 IPR007488 Protein of unknown function DUF535 YP_RS06420 IPR022602 Protein of unknown function DUF2813 YP_RS06420 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06425 IPR005642 Protein of unknown function DUF340, prokaryotic membrane YP_RS06430 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YP_RS06430 IPR010048 Hydroxylamine reductase YP_RS06430 IPR011254 Prismane-like YP_RS06430 IPR016099 Prismane-like, alpha/beta-sandwich YP_RS06430 IPR016100 Prismane, alpha-bundle YP_RS06435 IPR001041 2Fe-2S ferredoxin-type domain YP_RS06435 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS06435 IPR001834 NADH:cytochrome b5 reductase (CBR) YP_RS06435 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YP_RS06435 IPR008333 Oxidoreductase, FAD-binding domain YP_RS06435 IPR012675 Beta-grasp domain YP_RS06435 IPR017938 Riboflavin synthase-like beta-barrel YP_RS06440 IPR000399 TPP-binding enzyme, conserved site YP_RS06440 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_RS06440 IPR012000 Thiamine pyrophosphate enzyme, central domain YP_RS06440 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YP_RS06440 IPR029035 DHS-like NAD/FAD-binding domain YP_RS06440 IPR029061 Thiamin diphosphate-binding fold YP_RS06445 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YP_RS06445 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS06445 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS06445 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS06445 IPR023603 Threonine aldolase YP_RS06450 IPR016040 NAD(P)-binding domain YP_RS06450 IPR021295 Protein of unknown function DUF2867 YP_RS06455 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS06455 IPR016040 NAD(P)-binding domain YP_RS06460 IPR024289 Domain of unknown function DUF3828 YP_RS06465 IPR002701 Chorismate mutase YP_RS06465 IPR008240 Chorismate mutase, periplasmic YP_RS06465 IPR020822 Chorismate mutase, type II YP_RS06470 IPR003439 ABC transporter-like YP_RS06470 IPR003593 AAA+ ATPase domain YP_RS06470 IPR017871 ABC transporter, conserved site YP_RS06470 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06470 IPR030679 YP_RS06470 YP_RS06475 IPR001320 Ionotropic glutamate receptor YP_RS06475 IPR001638 Extracellular solute-binding protein, family 3 YP_RS06475 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YP_RS06475 IPR018313 Extracellular solute-binding protein, family 3, conserved site YP_RS06480 IPR000515 MetI-like domain YP_RS06480 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS06485 IPR000515 MetI-like domain YP_RS06485 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS06495 IPR000620 Drug/metabolite transporter YP_RS06500 IPR016040 NAD(P)-binding domain YP_RS06500 IPR016935 Protein of unknown function DUF2338 YP_RS06505 IPR004298 Nicotianamine synthase YP_RS06505 IPR016040 NAD(P)-binding domain YP_RS06510 IPR003439 ABC transporter-like YP_RS06510 IPR003593 AAA+ ATPase domain YP_RS06510 IPR017871 ABC transporter, conserved site YP_RS06510 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06520 IPR002491 ABC transporter periplasmic binding domain YP_RS06525 IPR001107 Band 7 protein YP_RS06525 IPR001972 Stomatin family YP_RS06540 IPR001320 Ionotropic glutamate receptor YP_RS06540 IPR001638 Extracellular solute-binding protein, family 3 YP_RS06540 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YP_RS06540 IPR018313 Extracellular solute-binding protein, family 3, conserved site YP_RS06545 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD YP_RS06545 IPR010280 (Uracil-5)-methyltransferase family YP_RS06545 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YP_RS06545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS06545 IPR030390 YP_RS06545 YP_RS06545 IPR030391 YP_RS06545 YP_RS06550 IPR019703 Protein of unknown function DUF2593 YP_RS06555 IPR000515 MetI-like domain YP_RS06560 IPR000515 MetI-like domain YP_RS06565 IPR003439 ABC transporter-like YP_RS06565 IPR003593 AAA+ ATPase domain YP_RS06565 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YP_RS06565 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS06565 IPR013611 Transport-associated OB, type 2 YP_RS06565 IPR017871 ABC transporter, conserved site YP_RS06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06570 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YP_RS06575 IPR019660 Putative sensory transduction regulator YbjN YP_RS06585 IPR010815 Protein of unknown function DUF1418 YP_RS06590 IPR002109 Glutaredoxin YP_RS06590 IPR011767 Glutaredoxin active site YP_RS06590 IPR011902 Glutaredoxin, GrxA YP_RS06590 IPR012336 Thioredoxin-like fold YP_RS06590 IPR014025 Glutaredoxin subgroup YP_RS06595 IPR006037 Regulator of K+ conductance, C-terminal YP_RS06595 IPR006512 YidE/YbjL duplication YP_RS06595 IPR023017 Transport protein YbjL, putative YP_RS06600 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YP_RS06605 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YP_RS06610 IPR002915 DeoC/FbaB/ lacD aldolase YP_RS06610 IPR011343 Deoxyribose-phosphate aldolase YP_RS06610 IPR013785 Aldolase-type TIM barrel YP_RS06610 IPR028581 Deoxyribose-phosphate aldolase type I YP_RS06615 IPR001034 HTH DeoR N-terminal domain YP_RS06615 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06615 IPR014036 DeoR C-terminal sensor domain YP_RS06615 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YP_RS06620 IPR004694 Hydroxy amino acid transporter YP_RS06620 IPR018227 Tryptophan/tyrosine permease YP_RS06630 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YP_RS06630 IPR012338 Beta-lactamase/transpeptidase-like YP_RS06630 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YP_RS06630 IPR015956 Penicillin-binding protein-associated YP_RS06630 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YP_RS06635 IPR000515 MetI-like domain YP_RS06640 IPR003439 ABC transporter-like YP_RS06640 IPR003593 AAA+ ATPase domain YP_RS06640 IPR017871 ABC transporter, conserved site YP_RS06640 IPR018449 NIL domain YP_RS06640 IPR026253 Methionine import ATP-binding protein MetN YP_RS06640 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06645 IPR004872 Lipoprotein NlpA family YP_RS06650 IPR002283 Isopenicillin N synthase YP_RS06650 IPR005123 Oxoglutarate/iron-dependent dioxygenase YP_RS06650 IPR026992 Non-haem dioxygenase N-terminal domain YP_RS06650 IPR027443 Isopenicillin N synthase-like YP_RS06655 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like YP_RS06655 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial YP_RS06655 IPR023214 HAD-like domain YP_RS06660 IPR004045 Glutathione S-transferase, N-terminal YP_RS06660 IPR010987 Glutathione S-transferase, C-terminal-like YP_RS06660 IPR012336 Thioredoxin-like fold YP_RS06665 IPR000531 TonB-dependent receptor, beta-barrel YP_RS06665 IPR010916 TonB box, conserved site YP_RS06665 IPR012910 TonB-dependent receptor, plug YP_RS06670 IPR003439 ABC transporter-like YP_RS06670 IPR003593 AAA+ ATPase domain YP_RS06670 IPR017871 ABC transporter, conserved site YP_RS06670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06675 IPR000522 ABC transporter, permease protein YP_RS06675 IPR029022 ABC transporter, BtuC-like YP_RS06680 IPR002491 ABC transporter periplasmic binding domain YP_RS06685 IPR002293 Amino acid/polyamine transporter I YP_RS06685 IPR004840 Amino acid permease, conserved site YP_RS06685 IPR004841 Amino acid permease/ SLC12A domain YP_RS06690 IPR000847 Transcription regulator HTH, LysR YP_RS06690 IPR005119 LysR, substrate-binding YP_RS06690 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06695 IPR004630 Uncharacterised protein family UPF0324, bacteria YP_RS06695 IPR018383 Uncharacterised protein family UPF0324, prokaryote YP_RS06700 IPR001719 AP endonuclease 2 YP_RS06700 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS06700 IPR018246 AP endonuclease 2, zinc binding site YP_RS06705 IPR000015 Outer membrane usher protein YP_RS06705 IPR018030 Fimbrial membrane usher, conserved site YP_RS06705 IPR025885 PapC, N-terminal domain YP_RS06705 IPR025949 PapC-like, C-terminal domain YP_RS06710 IPR001829 Pili assembly chaperone, bacterial YP_RS06710 IPR008962 PapD-like YP_RS06710 IPR016147 PapD, N-terminal, bacterial YP_RS06710 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS06710 IPR018046 Pili assembly chaperone, conserved site YP_RS06725 IPR001867 Signal transduction response regulator, C-terminal YP_RS06725 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06725 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS06730 IPR003352 Phosphotransferase system, EIIC YP_RS06730 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YP_RS06730 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YP_RS06730 IPR006327 Phosphotransferase system, fructose IIC component YP_RS06735 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YP_RS06735 IPR011611 Carbohydrate kinase PfkB YP_RS06735 IPR017583 Tagatose/fructose phosphokinase YP_RS06735 IPR022463 Fructose 1-phosphate kinase YP_RS06735 IPR029056 Ribokinase-like YP_RS06740 IPR000032 Phosphocarrier HPr protein-like YP_RS06740 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YP_RS06740 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YP_RS06740 IPR002178 PTS EIIA type-2 domain YP_RS06740 IPR016152 Phosphotransferase/anion transporter YP_RS06745 IPR000086 NUDIX hydrolase domain YP_RS06745 IPR015797 NUDIX hydrolase domain-like YP_RS06745 IPR020084 NUDIX hydrolase, conserved site YP_RS06745 IPR020476 NUDIX hydrolase YP_RS06750 IPR001851 ABC transporter, permease YP_RS06755 IPR003439 ABC transporter-like YP_RS06755 IPR003593 AAA+ ATPase domain YP_RS06755 IPR017871 ABC transporter, conserved site YP_RS06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06760 IPR025997 Periplasmic binding protein domain YP_RS06760 IPR028082 Periplasmic binding protein-like I YP_RS06765 IPR004788 Ribose 5-phosphate isomerase, type A YP_RS06765 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YP_RS06770 IPR000577 YP_RS06770 YP_RS06770 IPR018483 Carbohydrate kinase, FGGY, conserved site YP_RS06770 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS06770 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS06775 IPR015590 Aldehyde dehydrogenase domain YP_RS06775 IPR016160 Aldehyde dehydrogenase, cysteine active site YP_RS06775 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS06775 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS06775 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS06780 IPR011234 Fumarylacetoacetase, C-terminal-related YP_RS06785 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_RS06785 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YP_RS06785 IPR016040 NAD(P)-binding domain YP_RS06785 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YP_RS06790 IPR002347 Glucose/ribitol dehydrogenase YP_RS06790 IPR016040 NAD(P)-binding domain YP_RS06790 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS06795 IPR005358 Putative zinc- or iron-chelating domain containing protein YP_RS06800 IPR002091 Aromatic amino acid permease YP_RS06800 IPR013059 Tryptophan/tyrosine transporter YP_RS06800 IPR018227 Tryptophan/tyrosine permease YP_RS06805 IPR001059 Translation elongation factor P/YeiP, central YP_RS06805 IPR008991 Translation protein SH3-like domain YP_RS06805 IPR011897 Translation elongation factor P-like, YeiP YP_RS06805 IPR012340 Nucleic acid-binding, OB-fold YP_RS06805 IPR013185 Translation elongation factor, KOW-like YP_RS06805 IPR013852 Translation elongation factor P/YeiP, conserved site YP_RS06805 IPR014722 Ribosomal protein L2 domain 2 YP_RS06805 IPR015365 Elongation factor P, C-terminal YP_RS06805 IPR020599 Translation elongation factor P/YeiP YP_RS06810 IPR004628 Mannonate dehydratase YP_RS06810 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS06815 IPR000669 Mannitol dehydrogenase YP_RS06815 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS06815 IPR013118 Mannitol dehydrogenase, C-terminal YP_RS06815 IPR013131 Mannitol dehydrogenase, N-terminal YP_RS06815 IPR013328 Dehydrogenase, multihelical YP_RS06815 IPR016040 NAD(P)-binding domain YP_RS06815 IPR023027 Mannitol dehydrogenase, conserved site YP_RS06820 IPR000524 Transcription regulator HTH, GntR YP_RS06820 IPR008920 Transcription regulator FadR/GntR, C-terminal YP_RS06820 IPR011711 GntR, C-terminal YP_RS06820 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS06830 IPR003495 CobW/HypB/UreG domain YP_RS06830 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YP_RS06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06835 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YP_RS06835 IPR032908 YP_RS06835 YP_RS06840 IPR000064 Endopeptidase, NLPC/P60 domain YP_RS06845 IPR001633 EAL domain YP_RS06845 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YP_RS06850 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS06850 IPR030678 YP_RS06850 YP_RS06855 IPR000515 MetI-like domain YP_RS06860 IPR000515 MetI-like domain YP_RS06860 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YP_RS06865 IPR003439 ABC transporter-like YP_RS06865 IPR003593 AAA+ ATPase domain YP_RS06865 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YP_RS06865 IPR017871 ABC transporter, conserved site YP_RS06865 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06870 IPR020489 Uncharacterised protein family YejG YP_RS06875 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YP_RS06875 IPR011701 Major facilitator superfamily YP_RS06875 IPR020846 Major facilitator superfamily domain YP_RS06880 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YP_RS06880 IPR002942 RNA-binding S4 domain YP_RS06880 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YP_RS06880 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YP_RS06880 IPR020103 Pseudouridine synthase, catalytic domain YP_RS06885 IPR001650 Helicase, C-terminal YP_RS06885 IPR006935 Helicase/UvrB domain YP_RS06885 IPR011332 Zinc-binding ribosomal protein YP_RS06885 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS06885 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06890 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YP_RS06890 IPR020055 Ribosomal protein L25, short-form YP_RS06890 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YP_RS06890 IPR029751 Ribosomal protein L25 YP_RS06895 IPR002686 Transposase IS200-like YP_RS06905 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain YP_RS06905 IPR002368 Outer membrane protein, OmpA YP_RS06905 IPR006664 Outer membrane protein, bacterial YP_RS06905 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS06905 IPR006690 Outer membrane protein, OmpA-like, conserved site YP_RS06905 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS06910 IPR004596 Cell division suppressor protein, SulA YP_RS06910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06915 IPR007076 TfoX, N-terminal YP_RS06915 IPR007077 TfoX, C-terminal YP_RS06915 IPR026256 Transcriptional regulator, TfoX/Sxy-type YP_RS06920 IPR010019 Integral membrane protein, YccS YP_RS06920 IPR010020 Integral membrane protein, YccS/YhfK YP_RS06920 IPR032692 YP_RS06920 YP_RS06925 IPR005185 Protein of unknown function DUF307 YP_RS06925 IPR031308 YP_RS06925 YP_RS06930 IPR000212 DNA helicase, UvrD/REP type YP_RS06930 IPR014016 UvrD-like Helicase, ATP-binding domain YP_RS06930 IPR014017 DNA helicase, UvrD-like, C-terminal YP_RS06930 IPR022161 DNA helicase IV, N-terminal domain YP_RS06930 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS06935 IPR004363 Methylglyoxal synthase YP_RS06935 IPR011607 Methylglyoxal synthase-like domain YP_RS06935 IPR018148 Methylglyoxal synthase, active site YP_RS06940 IPR018635 Uncharacterised protein family UPF0319 YP_RS06945 IPR003781 CoA-binding YP_RS06945 IPR016040 NAD(P)-binding domain YP_RS06950 IPR011722 Hemimethylated DNA-binding domain YP_RS06950 IPR022866 Heat shock protein HspQ YP_RS06955 IPR002478 PUA domain YP_RS06955 IPR015947 PUA-like domain YP_RS06955 IPR019614 S-adenosylmethionine-dependent methyltransferase YP_RS06955 IPR023542 rRNA large subunit methyltransferase I YP_RS06955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS06960 IPR001792 Acylphosphatase-like domain YP_RS06960 IPR017968 Acylphosphatase, conserved site YP_RS06960 IPR020456 Acylphosphatase YP_RS06960 IPR028627 Acylphosphatase, bacteria YP_RS06965 IPR007453 Sulphur transfer protein DsrC/TusE YP_RS06965 IPR025526 DsrC-like domain YP_RS06975 IPR012337 Ribonuclease H-like domain YP_RS06975 IPR032874 YP_RS06975 YP_RS06995 IPR001584 Integrase, catalytic core YP_RS06995 IPR006120 Resolvase, HTH domain YP_RS06995 IPR009057 Homeodomain-like YP_RS06995 IPR012337 Ribonuclease H-like domain YP_RS07000 IPR001270 ClpA/B family YP_RS07000 IPR002611 IstB-like ATP-binding protein YP_RS07000 IPR003593 AAA+ ATPase domain YP_RS07000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07000 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS07010 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YP_RS07010 IPR006094 FAD linked oxidase, N-terminal YP_RS07010 IPR016166 FAD-binding, type 2 YP_RS07010 IPR016167 FAD-binding, type 2, subdomain 1 YP_RS07010 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS07010 IPR016181 Acyl-CoA N-acyltransferase YP_RS07015 IPR002347 Glucose/ribitol dehydrogenase YP_RS07015 IPR016040 NAD(P)-binding domain YP_RS07015 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS07025 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YP_RS07025 IPR029069 HotDog domain YP_RS07030 IPR014030 Beta-ketoacyl synthase, N-terminal YP_RS07030 IPR014031 Beta-ketoacyl synthase, C-terminal YP_RS07030 IPR016039 Thiolase-like YP_RS07030 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YP_RS07035 IPR002347 Glucose/ribitol dehydrogenase YP_RS07035 IPR016040 NAD(P)-binding domain YP_RS07035 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS07040 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YP_RS07040 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YP_RS07040 IPR016039 Thiolase-like YP_RS07045 IPR001753 Crotonase superfamily YP_RS07045 IPR029045 ClpP/crotonase-like domain YP_RS07050 IPR001753 Crotonase superfamily YP_RS07050 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YP_RS07050 IPR029045 ClpP/crotonase-like domain YP_RS07055 IPR002347 Glucose/ribitol dehydrogenase YP_RS07055 IPR016040 NAD(P)-binding domain YP_RS07060 IPR024311 Lipocalin-like domain YP_RS07065 IPR009081 Acyl carrier protein-like YP_RS07070 IPR001227 Acyl transferase domain YP_RS07070 IPR014043 Acyl transferase YP_RS07070 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YP_RS07070 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YP_RS07070 IPR020801 Polyketide synthase, acyl transferase domain YP_RS07070 IPR024925 Malonyl CoA-acyl carrier protein transacylase YP_RS07080 IPR008312 Uncharacterised conserved protein UCP028301 YP_RS07085 IPR010269 Protein of unknown function DUF877 YP_RS07090 IPR010263 Protein of unknown function DUF876 YP_RS07095 IPR017732 Type IV / VI secretion system, DotU YP_RS07100 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS07105 IPR008514 Type VI secretion system effector, Hcp YP_RS07110 IPR001270 ClpA/B family YP_RS07110 IPR003593 AAA+ ATPase domain YP_RS07110 IPR003959 ATPase, AAA-type, core YP_RS07110 IPR004176 Clp, N-terminal YP_RS07110 IPR017729 Type VI secretion system, ATPase ClpV1 YP_RS07110 IPR018368 ClpA/B, conserved site 1 YP_RS07110 IPR019489 Clp ATPase, C-terminal YP_RS07110 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07115 IPR006531 Gp5 N-terminal YP_RS07115 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YP_RS07115 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YP_RS07115 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YP_RS07115 IPR027440 Capsid protein alpha-like domain YP_RS07115 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YP_RS07120 IPR011055 Duplicated hybrid motif YP_RS07120 IPR016047 Peptidase M23 YP_RS07120 IPR023346 Lysozyme-like domain YP_RS07130 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YP_RS07135 IPR011055 Duplicated hybrid motif YP_RS07135 IPR016047 Peptidase M23 YP_RS07135 IPR023346 Lysozyme-like domain YP_RS07145 IPR025959 Winged helix-turn helix domain YP_RS07155 IPR009612 ImcF-related YP_RS07155 IPR010623 Domain of unknown function DUF1215 YP_RS07165 IPR008727 PAAR motif YP_RS07165 IPR028946 Putative toxin 60 YP_RS07175 IPR010272 Type VI secretion system, VCA0110 YP_RS07180 IPR010732 Protein of unknown function DUF1305 YP_RS07185 IPR017734 Type VI secretion system, lipoprotein SciN YP_RS07190 IPR007048 GpW/Gp25/anti-adapter protein IraD YP_RS07190 IPR017737 Type VI secretion system, lysozyme-related protein YP_RS07195 IPR010657 ImpA, N-terminal YP_RS07195 IPR021069 ImpA, C-terminal YP_RS07200 IPR031829 YP_RS07200 YP_RS07205 IPR003439 ABC transporter-like YP_RS07205 IPR003593 AAA+ ATPase domain YP_RS07205 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07205 IPR032781 YP_RS07205 YP_RS07210 IPR031829 YP_RS07210 YP_RS07215 IPR001207 Transposase, mutator type YP_RS07220 IPR000594 UBA/THIF-type NAD/FAD binding fold YP_RS07220 IPR012730 Molybdopterin synthase sulfurylase MoeB YP_RS07220 IPR016040 NAD(P)-binding domain YP_RS07225 IPR001453 Molybdopterin binding domain YP_RS07225 IPR005110 MoeA, N-terminal and linker domain YP_RS07225 IPR005111 MoeA, C-terminal, domain IV YP_RS07225 IPR008284 Molybdenum cofactor biosynthesis, conserved site YP_RS07230 IPR007197 Radical SAM YP_RS07230 IPR013785 Aldolase-type TIM barrel YP_RS07230 IPR023885 4Fe4S-binding SPASM domain YP_RS07235 IPR003439 ABC transporter-like YP_RS07235 IPR003593 AAA+ ATPase domain YP_RS07235 IPR017871 ABC transporter, conserved site YP_RS07235 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07260 IPR000801 Putative esterase YP_RS07260 IPR014186 S-formylglutathione hydrolase YP_RS07260 IPR029058 Alpha/Beta hydrolase fold YP_RS07265 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YP_RS07265 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YP_RS07265 IPR011032 GroES (chaperonin 10)-like YP_RS07265 IPR013149 Alcohol dehydrogenase, C-terminal YP_RS07265 IPR013154 Alcohol dehydrogenase GroES-like YP_RS07265 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase YP_RS07265 IPR016040 NAD(P)-binding domain YP_RS07265 IPR020843 Polyketide synthase, enoylreductase YP_RS07270 IPR000847 Transcription regulator HTH, LysR YP_RS07270 IPR005119 LysR, substrate-binding YP_RS07270 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS07275 IPR010645 Domain of unknown function DUF1228 YP_RS07275 IPR020846 Major facilitator superfamily domain YP_RS07280 IPR001474 GTP cyclohydrolase I YP_RS07280 IPR018234 GTP cyclohydrolase I, conserved site YP_RS07280 IPR020602 GTP cyclohydrolase I domain YP_RS07285 IPR007349 Domain of unknown function DUF418 YP_RS07290 IPR025997 Periplasmic binding protein domain YP_RS07290 IPR028082 Periplasmic binding protein-like I YP_RS07295 IPR003439 ABC transporter-like YP_RS07295 IPR003593 AAA+ ATPase domain YP_RS07295 IPR017871 ABC transporter, conserved site YP_RS07295 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07300 IPR001851 ABC transporter, permease YP_RS07300 IPR030158 YP_RS07300 YP_RS07305 IPR003848 Domain of unknown function DUF218 YP_RS07305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS07305 IPR023604 Uncharacterised protein family SanA YP_RS07310 IPR001891 Malic oxidoreductase YP_RS07310 IPR012301 Malic enzyme, N-terminal domain YP_RS07310 IPR012302 Malic enzyme, NAD-binding YP_RS07310 IPR015884 Malic enzyme, conserved site YP_RS07310 IPR016040 NAD(P)-binding domain YP_RS07310 IPR023667 NAD-dependent malic enzyme, proteobacteria YP_RS07315 IPR002125 CMP/dCMP deaminase, zinc-binding YP_RS07315 IPR006263 Cytidine deaminase, homodimeric YP_RS07315 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YP_RS07315 IPR016192 APOBEC/CMP deaminase, zinc-binding YP_RS07315 IPR016193 Cytidine deaminase-like YP_RS07315 IPR020797 Cytidine deaminase, bacteria YP_RS07320 IPR005261 Conserved hypothetical protein CHP00659 YP_RS07320 IPR007300 CidB/LrgB family YP_RS07325 IPR005538 LrgA/CidA family YP_RS07325 IPR022957 Uncharacterised protein family UPF0299 YP_RS07330 IPR011701 Major facilitator superfamily YP_RS07330 IPR020846 Major facilitator superfamily domain YP_RS07335 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YP_RS07335 IPR013211 LVIVD YP_RS07340 IPR025997 Periplasmic binding protein domain YP_RS07340 IPR028082 Periplasmic binding protein-like I YP_RS07355 IPR002686 Transposase IS200-like YP_RS07360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS07360 IPR002547 tRNA-binding domain YP_RS07360 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal YP_RS07360 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YP_RS07360 IPR012340 Nucleic acid-binding, OB-fold YP_RS07360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS07360 IPR014758 Methionyl-tRNA synthetase YP_RS07360 IPR015413 Methionyl/Leucyl tRNA synthetase YP_RS07360 IPR023458 Methionine-tRNA ligase, type 1 YP_RS07360 IPR029038 Methionyl-tRNA synthetase, Zn-domain YP_RS07365 IPR000808 Mrp, conserved site YP_RS07365 IPR019591 Mrp/NBP35 ATP-binding protein YP_RS07365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07370 IPR000764 Uridine kinase like YP_RS07370 IPR006083 Phosphoribulokinase/uridine kinase YP_RS07370 IPR026008 Uridine kinase YP_RS07370 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07375 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase YP_RS07375 IPR011962 Deoxycytidine triphosphate deaminase YP_RS07375 IPR029054 dUTPase-like YP_RS07380 IPR007844 AsmA YP_RS07380 IPR032712 YP_RS07380 YP_RS07385 IPR000644 CBS domain YP_RS07385 IPR005170 Transporter-associated domain YP_RS07385 IPR005496 Integral membrane protein TerC YP_RS07385 IPR016166 FAD-binding, type 2 YP_RS07385 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS07390 IPR008090 Ferric iron reductase YP_RS07390 IPR022770 Ferric iron reductase FhuF domain YP_RS07390 IPR024726 Ferric iron reductase, C-terminal YP_RS07395 IPR002129 Pyridoxal phosphate-dependent decarboxylase YP_RS07395 IPR010977 Aromatic-L-amino-acid decarboxylase YP_RS07395 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS07395 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS07395 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS07400 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS07400 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YP_RS07405 IPR016181 Acyl-CoA N-acyltransferase YP_RS07405 IPR019432 Siderophore biosynthesis protein, conserved domain YP_RS07410 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YP_RS07410 IPR022770 Ferric iron reductase FhuF domain YP_RS07415 IPR003439 ABC transporter-like YP_RS07415 IPR003593 AAA+ ATPase domain YP_RS07415 IPR017871 ABC transporter, conserved site YP_RS07415 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07420 IPR000522 ABC transporter, permease protein YP_RS07420 IPR029022 ABC transporter, BtuC-like YP_RS07425 IPR000522 ABC transporter, permease protein YP_RS07425 IPR029022 ABC transporter, BtuC-like YP_RS07430 IPR002491 ABC transporter periplasmic binding domain YP_RS07435 IPR000531 TonB-dependent receptor, beta-barrel YP_RS07435 IPR010105 TonB-dependent siderophore receptor YP_RS07435 IPR010917 TonB-dependent receptor, conserved site YP_RS07435 IPR012910 TonB-dependent receptor, plug YP_RS07440 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YP_RS07440 IPR022770 Ferric iron reductase FhuF domain YP_RS07445 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YP_RS07445 IPR005835 Nucleotidyl transferase YP_RS07445 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS07450 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YP_RS07450 IPR005835 Nucleotidyl transferase YP_RS07450 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS07455 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YP_RS07455 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YP_RS07455 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YP_RS07455 IPR006183 YP_RS07455 YP_RS07455 IPR006184 6-phosphogluconate-binding site YP_RS07455 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS07455 IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension YP_RS07455 IPR013328 Dehydrogenase, multihelical YP_RS07455 IPR016040 NAD(P)-binding domain YP_RS07460 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YP_RS07460 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YP_RS07460 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YP_RS07460 IPR023019 Histidine biosynthesis bifunctional protein HisIE YP_RS07465 IPR004651 Histidine biosynthesis, HisF YP_RS07465 IPR006062 Histidine biosynthesis YP_RS07465 IPR011060 Ribulose-phosphate binding barrel YP_RS07465 IPR013785 Aldolase-type TIM barrel YP_RS07470 IPR006062 Histidine biosynthesis YP_RS07470 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YP_RS07470 IPR011060 Ribulose-phosphate binding barrel YP_RS07470 IPR013785 Aldolase-type TIM barrel YP_RS07470 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_RS07475 IPR010139 Imidazole glycerol phosphate synthase, subunit H YP_RS07475 IPR017926 Glutamine amidotransferase YP_RS07475 IPR029062 Class I glutamine amidotransferase-like YP_RS07480 IPR000807 Imidazoleglycerol-phosphate dehydratase YP_RS07480 IPR005954 Histidinol-phosphatase YP_RS07480 IPR006543 Histidinol-phosphate phosphatase YP_RS07480 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YP_RS07480 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YP_RS07480 IPR020566 Histidine biosynthesis bifunctional protein HisB YP_RS07480 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS07480 IPR023214 HAD-like domain YP_RS07485 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YP_RS07485 IPR004839 Aminotransferase, class I/classII YP_RS07485 IPR005861 Histidinol-phosphate aminotransferase family YP_RS07485 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS07485 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS07485 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS07490 IPR001692 Histidinol dehydrogenase, conserved site YP_RS07490 IPR012131 Histidinol dehydrogenase YP_RS07490 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS07490 IPR022695 Histidinol dehydrogenase, monofunctional YP_RS07495 IPR001348 ATP phosphoribosyltransferase HisG YP_RS07495 IPR011322 Nitrogen regulatory PII-like, alpha/beta YP_RS07495 IPR013115 Histidine biosynthesis HisG, C-terminal YP_RS07495 IPR013820 ATP phosphoribosyltransferase, catalytic domain YP_RS07495 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YP_RS07495 IPR018198 ATP phosphoribosyltransferase, conserved site YP_RS07495 IPR020621 ATP phosphoribosyltransferase HisG, long form YP_RS07500 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS07500 IPR016040 NAD(P)-binding domain YP_RS07505 IPR032032 YP_RS07505 YP_RS07510 IPR001851 ABC transporter, permease YP_RS07515 IPR003439 ABC transporter-like YP_RS07515 IPR003593 AAA+ ATPase domain YP_RS07515 IPR017871 ABC transporter, conserved site YP_RS07515 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07520 IPR003439 ABC transporter-like YP_RS07520 IPR003593 AAA+ ATPase domain YP_RS07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07525 IPR001670 Alcohol dehydrogenase, iron-type YP_RS07525 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YP_RS07535 IPR002293 Amino acid/polyamine transporter I YP_RS07540 IPR012337 Ribonuclease H-like domain YP_RS07540 IPR013520 Exonuclease, RNase T/DNA polymerase III YP_RS07540 IPR013620 Exonuclease C-terminal YP_RS07540 IPR023607 Exodeoxyribonuclease I YP_RS07545 IPR013120 Male sterility, NAD-binding YP_RS07545 IPR016040 NAD(P)-binding domain YP_RS07550 IPR007458 Protein of unknown function DUF496 YP_RS07555 IPR003344 Bacterial Ig-like, group 1 YP_RS07555 IPR003535 Intimin/invasin bacterial adhesion mediator protein YP_RS07555 IPR008964 Invasin/intimin cell-adhesion YP_RS07555 IPR015217 Invasin, domain 3 YP_RS07555 IPR024519 Domain of unknown function DUF3442, intimin/invasin YP_RS07560 IPR011701 Major facilitator superfamily YP_RS07560 IPR020846 Major facilitator superfamily domain YP_RS07565 IPR007263 Protein of unknown function DUF393 YP_RS07570 IPR002347 Glucose/ribitol dehydrogenase YP_RS07570 IPR016040 NAD(P)-binding domain YP_RS07570 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS07575 IPR011234 Fumarylacetoacetase, C-terminal-related YP_RS07580 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YP_RS07580 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YP_RS07580 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_RS07580 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YP_RS07580 IPR029017 Enolase N-terminal domain-like YP_RS07580 IPR029065 Enolase C-terminal domain-like YP_RS07585 IPR000262 FMN-dependent dehydrogenase YP_RS07585 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YP_RS07585 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YP_RS07585 IPR013785 Aldolase-type TIM barrel YP_RS07585 IPR020920 L-lactate dehydrogenase, bacterial YP_RS07590 IPR001518 Argininosuccinate synthase YP_RS07590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS07590 IPR018223 Argininosuccinate synthase, conserved site YP_RS07590 IPR023437 Argininosuccinate synthase, type 2 subfamily YP_RS07590 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail YP_RS07590 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body YP_RS07595 IPR002528 Multi antimicrobial extrusion protein YP_RS07600 IPR005829 Sugar transporter, conserved site YP_RS07600 IPR011701 Major facilitator superfamily YP_RS07600 IPR020846 Major facilitator superfamily domain YP_RS07605 IPR002509 Polysaccharide deacetylase YP_RS07605 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YP_RS07615 IPR018636 Protein of unknown function DUF2058 YP_RS07625 IPR000792 Transcription regulator LuxR, C-terminal YP_RS07625 IPR001789 Signal transduction response regulator, receiver domain YP_RS07625 IPR011006 CheY-like superfamily YP_RS07625 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS07625 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS07630 IPR004681 TRAP transporter permease protein YP_RS07630 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YP_RS07635 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component YP_RS07640 IPR004682 TRAP dicarboxylate transporter YP_RS07640 IPR018389 Bacterial extracellular solute-binding protein, family 7 YP_RS07645 IPR003542 Enterobactin synthetase-like, component D YP_RS07645 IPR008278 4'-phosphopantetheinyl transferase superfamily YP_RS07655 IPR000111 Glycoside hydrolase, clan GH-D YP_RS07655 IPR002252 Glycoside hydrolase, family 36 YP_RS07655 IPR013785 Aldolase-type TIM barrel YP_RS07655 IPR017853 Glycoside hydrolase, superfamily YP_RS07655 IPR031704 YP_RS07655 YP_RS07660 IPR000576 LacY/RafB permease family YP_RS07660 IPR020846 Major facilitator superfamily domain YP_RS07665 IPR000843 Transcription regulator HTH, LacI YP_RS07665 IPR001761 Periplasmic binding protein/LacI sugar binding domain YP_RS07665 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS07665 IPR028082 Periplasmic binding protein-like I YP_RS07675 IPR010384 MtfA family YP_RS07675 IPR024079 Metallopeptidase, catalytic domain YP_RS07685 IPR005545 YCII-related YP_RS07685 IPR011008 Dimeric alpha-beta barrel YP_RS07690 IPR000687 RIO kinase YP_RS07690 IPR011009 Protein kinase-like domain YP_RS07690 IPR018935 RIO kinase, conserved site YP_RS07695 IPR003439 ABC transporter-like YP_RS07695 IPR003593 AAA+ ATPase domain YP_RS07695 IPR011527 ABC transporter type 1, transmembrane domain YP_RS07695 IPR017871 ABC transporter, conserved site YP_RS07695 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07705 IPR009057 Homeodomain-like YP_RS07705 IPR018060 DNA binding HTH domain, AraC-type YP_RS07705 IPR018062 HTH domain AraC-type, conserved site YP_RS07705 IPR020449 Transcription regulator HTH, AraC- type YP_RS07715 IPR020262 Uncharacterised protein family YecJ YP_RS07720 IPR025611 YobH-like protein YP_RS07725 IPR025594 YebO-like protein YP_RS07730 IPR019701 Bacteriophage P22, NinX YP_RS07735 IPR025135 Protein of unknown function DUF4060 YP_RS07740 IPR002293 Amino acid/polyamine transporter I YP_RS07740 IPR004840 Amino acid permease, conserved site YP_RS07740 IPR004841 Amino acid permease/ SLC12A domain YP_RS07745 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YP_RS07745 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS07755 IPR019672 Protein of unknown function DUF2627 YP_RS07760 IPR002059 Cold-shock protein, DNA-binding YP_RS07760 IPR011129 Cold shock protein YP_RS07760 IPR012156 Cold shock, CspA YP_RS07760 IPR012340 Nucleic acid-binding, OB-fold YP_RS07760 IPR019844 Cold-shock conserved site YP_RS07765 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YP_RS07765 IPR011324 Cytotoxic necrotizing factor-like, catalytic YP_RS07770 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YP_RS07770 IPR025714 Methyltransferase domain YP_RS07770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS07780 IPR000014 PAS domain YP_RS07780 IPR000160 GGDEF domain YP_RS07780 IPR001610 PAC motif YP_RS07780 IPR013767 PAS fold YP_RS07780 IPR029787 Nucleotide cyclase YP_RS07785 IPR001270 ClpA/B family YP_RS07785 IPR002611 IstB-like ATP-binding protein YP_RS07785 IPR003593 AAA+ ATPase domain YP_RS07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07785 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS07790 IPR001584 Integrase, catalytic core YP_RS07790 IPR006120 Resolvase, HTH domain YP_RS07790 IPR009057 Homeodomain-like YP_RS07790 IPR012337 Ribonuclease H-like domain YP_RS07820 IPR003439 ABC transporter-like YP_RS07820 IPR003593 AAA+ ATPase domain YP_RS07820 IPR017871 ABC transporter, conserved site YP_RS07820 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS07825 IPR000515 MetI-like domain YP_RS07830 IPR000515 MetI-like domain YP_RS07835 IPR006059 Bacterial extracellular solute-binding, family 1 YP_RS07840 IPR000683 Oxidoreductase, N-terminal YP_RS07840 IPR016040 NAD(P)-binding domain YP_RS07850 IPR000524 Transcription regulator HTH, GntR YP_RS07850 IPR011663 UbiC transcription regulator-associated YP_RS07850 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS07850 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YP_RS07875 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain YP_RS07880 IPR025528 Protein of unknown function DUF4415 YP_RS07885 IPR007460 Burkholderia phage Bups phi1, Orf7.3 YP_RS07890 IPR006531 Gp5 N-terminal YP_RS07890 IPR013046 Bacteriophage Mu/P2, baseplate assembly YP_RS07895 IPR007048 GpW/Gp25/anti-adapter protein IraD YP_RS07910 IPR021225 Protein of unknown function DUF2778 YP_RS07925 IPR002514 Transposase IS3/IS911family YP_RS07925 IPR009057 Homeodomain-like YP_RS07925 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS07930 IPR001584 Integrase, catalytic core YP_RS07930 IPR012337 Ribonuclease H-like domain YP_RS07935 IPR008514 Type VI secretion system effector, Hcp YP_RS07955 IPR007694 DNA helicase, DnaB-like, C-terminal YP_RS07960 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS07960 IPR013762 Integrase-like, catalytic core YP_RS07960 IPR023109 Integrase/recombinase, N-terminal YP_RS07980 IPR000462 CDP-alcohol phosphatidyltransferase YP_RS07980 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_RS07980 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YP_RS07985 IPR000305 GIY-YIG nuclease superfamily YP_RS07985 IPR001162 UvrC family homology region YP_RS07985 IPR001943 UVR domain YP_RS07985 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YP_RS07985 IPR004791 UvrABC system, subunit C YP_RS07985 IPR010994 RuvA domain 2-like YP_RS07985 IPR027299 GIY-YIG domain YP_RS07990 IPR000792 Transcription regulator LuxR, C-terminal YP_RS07990 IPR001789 Signal transduction response regulator, receiver domain YP_RS07990 IPR011006 CheY-like superfamily YP_RS07990 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS07990 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS07995 IPR019705 Protein of unknown function DUF2594 YP_RS08000 IPR009707 GlpM YP_RS08010 IPR000758 Virulence-related outer membrane protein YP_RS08010 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS08010 IPR027385 Outer membrane protein beta-barrel YP_RS08020 IPR002293 Amino acid/polyamine transporter I YP_RS08020 IPR004840 Amino acid permease, conserved site YP_RS08020 IPR004841 Amino acid permease/ SLC12A domain YP_RS08025 IPR006652 Kelch repeat type 1 YP_RS08025 IPR015915 Kelch-type beta propeller YP_RS08025 IPR019936 Mutatrotase, YjhT-like YP_RS08030 IPR005025 NADPH-dependent FMN reductase-like YP_RS08030 IPR010089 Flavoprotein WrbA YP_RS08030 IPR029039 Flavoprotein-like YP_RS08035 IPR006313 Deferrochelatase/peroxidase EfeB YP_RS08035 IPR006314 Dyp-type peroxidase YP_RS08035 IPR011008 Dimeric alpha-beta barrel YP_RS08040 IPR008972 Cupredoxin YP_RS08040 IPR028096 EfeO-type cupredoxin-like domain YP_RS08045 IPR004923 Iron permease FTR1/Fip1/EfeU YP_RS08050 IPR001734 Sodium/solute symporter YP_RS08050 IPR011851 Sodium/proline symporter YP_RS08050 IPR018212 Sodium/solute symporter, conserved site YP_RS08060 IPR002872 Proline dehydrogenase domain YP_RS08060 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YP_RS08060 IPR010985 Ribbon-helix-helix YP_RS08060 IPR015590 Aldehyde dehydrogenase domain YP_RS08060 IPR016160 Aldehyde dehydrogenase, cysteine active site YP_RS08060 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS08060 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS08060 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS08060 IPR024082 Proline dehydrogenase PutA, domain II YP_RS08060 IPR024089 Proline dehydrogenase PutA, domain I/II YP_RS08060 IPR024090 Proline dehydrogenase PutA, domain I YP_RS08060 IPR025703 Bifunctional protein PutA YP_RS08060 IPR029041 FAD-linked oxidoreductase-like YP_RS08060 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YP_RS08070 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08075 IPR003439 ABC transporter-like YP_RS08075 IPR003593 AAA+ ATPase domain YP_RS08075 IPR017871 ABC transporter, conserved site YP_RS08075 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08075 IPR030679 YP_RS08075 YP_RS08080 IPR000515 MetI-like domain YP_RS08080 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS08085 IPR001320 Ionotropic glutamate receptor YP_RS08085 IPR001638 Extracellular solute-binding protein, family 3 YP_RS08085 IPR018313 Extracellular solute-binding protein, family 3, conserved site YP_RS08090 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS08090 IPR005966 D-cysteine desulfhydrase YP_RS08090 IPR023702 D-cysteine desulphhydrase, bacterial YP_RS08090 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YP_RS08095 IPR004107 Integrase, SAM-like, N-terminal YP_RS08095 IPR022523 Flagellar regulator, FliZ YP_RS08100 IPR000943 RNA polymerase sigma-70 YP_RS08100 IPR007624 RNA polymerase sigma-70 region 3 YP_RS08100 IPR007627 RNA polymerase sigma-70 region 2 YP_RS08100 IPR007630 RNA polymerase sigma-70 region 4 YP_RS08100 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08100 IPR012845 RNA polymerase sigma factor, FliA/WhiG YP_RS08100 IPR013324 RNA polymerase sigma factor, region 3/4 YP_RS08100 IPR013325 RNA polymerase sigma factor, region 2 YP_RS08100 IPR014284 RNA polymerase sigma-70 like domain YP_RS08100 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE YP_RS08100 IPR028617 RNA polymerase sigma factor FliA YP_RS08105 IPR001029 Flagellin, D0/D1 domain YP_RS08105 IPR001492 Flagellin YP_RS08110 IPR003481 Flagellar hook-associated protein 2, N-terminal YP_RS08110 IPR010809 Flagellar hook-associated 2, C-terminal YP_RS08110 IPR010810 Flagellin hook, IN motif YP_RS08115 IPR003713 Flagellar protein FliS YP_RS08120 IPR008622 Flagellar protein FliT YP_RS08130 IPR003313 AraC-type arabinose-binding/dimerisation domain YP_RS08130 IPR009057 Homeodomain-like YP_RS08130 IPR018060 DNA binding HTH domain, AraC-type YP_RS08130 IPR020449 Transcription regulator HTH, AraC- type YP_RS08135 IPR029016 GAF domain-like YP_RS08145 IPR003265 HhH-GPD domain YP_RS08145 IPR011257 DNA glycosylase YP_RS08145 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YP_RS08150 IPR003812 Fido domain YP_RS08150 IPR006440 Death on curing protein YP_RS08160 IPR001624 Flagellar hook-basal body complex protein FliE YP_RS08165 IPR000067 Flagellar M-ring protein FliF YP_RS08165 IPR006182 Secretory protein YscJ/FliF YP_RS08165 IPR013556 Flagellar M-ring C-terminal YP_RS08170 IPR000090 Flagellar motor switch protein FliG YP_RS08170 IPR011002 Flagellar motor switch protein FliG, alpha-helical YP_RS08170 IPR023087 YP_RS08170 YP_RS08170 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YP_RS08170 IPR032779 YP_RS08170 YP_RS08175 IPR000563 Flagellar assembly protein FliH YP_RS08175 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YP_RS08180 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YP_RS08180 IPR003593 AAA+ ATPase domain YP_RS08180 IPR005714 ATPase, type III secretion system, FliI/YscN YP_RS08180 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YP_RS08180 IPR020005 Flagellar export ATPase FliI, clade 1 YP_RS08180 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08180 IPR032463 YP_RS08180 YP_RS08185 IPR012823 Flagellar export FliJ YP_RS08185 IPR018006 Flagellar FliJ, proteobacteria YP_RS08190 IPR001635 Flagellar hook-length control protein FliK YP_RS08190 IPR021136 Flagellar hook-length control protein-like, C-terminal YP_RS08195 IPR005503 Flagellar basal body-associated protein FliL YP_RS08200 IPR001543 Surface presentation of antigen (SpoA) YP_RS08200 IPR001689 Flagellar motor switch protein FliM YP_RS08200 IPR028976 CheC-like domain YP_RS08205 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YP_RS08205 IPR001543 Surface presentation of antigen (SpoA) YP_RS08205 IPR012826 Flagellar motor switch FliN YP_RS08205 IPR031576 YP_RS08205 YP_RS08210 IPR022781 Flagellar biosynthesis protein, FliO YP_RS08215 IPR005837 Flagellar transport protein FliP YP_RS08215 IPR005838 Type III secretion system inner membrane P protein YP_RS08220 IPR002191 Bacterial export protein family 3 YP_RS08220 IPR006305 Flagellar biosynthesis protein FliQ YP_RS08225 IPR002010 Type III secretion system inner membrane R protein YP_RS08225 IPR006303 Flagellar biosynthesis protein FliR YP_RS08230 IPR012933 HicA mRNA interferase family YP_RS08235 IPR013321 Arc-type ribbon-helix-helix YP_RS08235 IPR031807 YP_RS08235 YP_RS08240 IPR011611 Carbohydrate kinase PfkB YP_RS08240 IPR029056 Ribokinase-like YP_RS08245 IPR001851 ABC transporter, permease YP_RS08250 IPR003439 ABC transporter-like YP_RS08250 IPR003593 AAA+ ATPase domain YP_RS08250 IPR017871 ABC transporter, conserved site YP_RS08250 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08255 IPR025997 Periplasmic binding protein domain YP_RS08255 IPR028082 Periplasmic binding protein-like I YP_RS08260 IPR001851 ABC transporter, permease YP_RS08265 IPR001303 Class II aldolase/adducin N-terminal YP_RS08265 IPR002347 Glucose/ribitol dehydrogenase YP_RS08265 IPR016040 NAD(P)-binding domain YP_RS08265 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS08270 IPR007324 Sugar-binding domain, putative YP_RS08270 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08270 IPR013324 RNA polymerase sigma factor, region 3/4 YP_RS08275 IPR001029 Flagellin, D0/D1 domain YP_RS08275 IPR013384 Flagellar hook-associated protein 3 YP_RS08280 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS08280 IPR002371 Flagellar hook-associated protein, FlgK YP_RS08280 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS08285 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YP_RS08285 IPR013377 Flagellar rod assembly protein/muramidase FlgJ YP_RS08285 IPR019301 Flagellar protein FlgJ, N-terminal YP_RS08290 IPR001782 Flagellar P-ring protein YP_RS08295 IPR000527 Flagellar L-ring protein YP_RS08305 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS08305 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YP_RS08310 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS08310 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS08310 IPR011491 Flagellar basal body FlaE YP_RS08310 IPR019776 Flagellar basal body rod protein, conserved site YP_RS08310 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YP_RS08315 IPR005648 Flagellar hook capping protein YP_RS08315 IPR025963 FlgD Tudor-like domain YP_RS08315 IPR025965 FlgD Ig-like domain YP_RS08320 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS08320 IPR006299 Flagellar basal-body rod protein FlgC YP_RS08320 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS08320 IPR019776 Flagellar basal body rod protein, conserved site YP_RS08325 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS08325 IPR006300 Flagellar basal-body rod protein FlgB YP_RS08325 IPR019776 Flagellar basal body rod protein, conserved site YP_RS08330 IPR013974 SAF domain YP_RS08330 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YP_RS08335 IPR007412 Anti-sigma-28 factor, FlgM YP_RS08335 IPR031316 YP_RS08335 YP_RS08340 IPR007809 FlgN-like domain YP_RS08345 IPR003344 Bacterial Ig-like, group 1 YP_RS08345 IPR008964 Invasin/intimin cell-adhesion YP_RS08345 IPR013117 Intimin, C-terminal YP_RS08345 IPR015217 Invasin, domain 3 YP_RS08345 IPR016186 C-type lectin-like YP_RS08345 IPR016187 C-type lectin fold YP_RS08345 IPR024519 Domain of unknown function DUF3442, intimin/invasin YP_RS08350 IPR002686 Transposase IS200-like YP_RS08355 IPR003535 Intimin/invasin bacterial adhesion mediator protein YP_RS08355 IPR024519 Domain of unknown function DUF3442, intimin/invasin YP_RS08360 IPR009420 Flagellar FlhE YP_RS08365 IPR001712 Type III secretion system FHIPEP YP_RS08365 IPR006301 Flagellar biosynthesis protein FlhA YP_RS08365 IPR025505 FHIPEP conserved site YP_RS08370 IPR006135 Type III secretion system substrate exporter YP_RS08370 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YP_RS08370 IPR029025 Type III secretion system substrate exporter, C-terminal YP_RS08380 IPR009081 Acyl carrier protein-like YP_RS08380 IPR010862 Protein of unknown function DUF1493 YP_RS08390 IPR019648 Protein of unknown function DUF2511 YP_RS08395 IPR008457 Copper resistance D YP_RS08400 IPR007348 CopC domain YP_RS08400 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like YP_RS08400 IPR014756 Immunoglobulin E-set YP_RS08400 IPR032694 YP_RS08400 YP_RS08410 IPR001519 Ferritin YP_RS08410 IPR008331 Ferritin/DPS protein domain YP_RS08410 IPR009078 Ferritin-like superfamily YP_RS08410 IPR012347 Ferritin-related YP_RS08415 IPR009052 DNA polymerase III-theta, bacterial YP_RS08415 IPR011325 DNA polymerase III-theta, core, bacterial YP_RS08420 IPR000073 Alpha/beta hydrolase fold-1 YP_RS08420 IPR002410 Peptidase S33 YP_RS08420 IPR005944 Proline iminopeptidase YP_RS08420 IPR029058 Alpha/Beta hydrolase fold YP_RS08425 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YP_RS08425 IPR002470 Peptidase S9A, prolyl oligopeptidase YP_RS08425 IPR023302 Peptidase S9A, N-terminal domain YP_RS08425 IPR029058 Alpha/Beta hydrolase fold YP_RS08430 IPR020236 Uncharacterised protein family YebF YP_RS08430 IPR025603 YebF/Colicin-M immunity protein YP_RS08435 IPR007374 ASCH domain YP_RS08435 IPR008314 Uncharacterised conserved protein UCP029143 YP_RS08435 IPR015947 PUA-like domain YP_RS08440 IPR009813 Uncharacterised protein family YebG YP_RS08445 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YP_RS08445 IPR001650 Helicase, C-terminal YP_RS08445 IPR005580 DbpA, RNA-binding YP_RS08445 IPR011545 DEAD/DEAH box helicase domain YP_RS08445 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS08445 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08445 IPR028619 ATP-dependent RNA helicase DbpA YP_RS08450 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YP_RS08450 IPR005862 Phosphoribosylglycinamide formyltransferase 2 YP_RS08450 IPR011054 Rudiment single hybrid motif YP_RS08450 IPR013815 ATP-grasp fold, subdomain 1 YP_RS08450 IPR013816 ATP-grasp fold, subdomain 2 YP_RS08450 IPR016185 Pre-ATP-grasp domain YP_RS08455 IPR005371 Uncharacterised protein family UPF0181 YP_RS08460 IPR005801 ADC synthase YP_RS08460 IPR005802 Para-aminobenzoate synthase, component I YP_RS08460 IPR006805 Anthranilate synthase component I, N-terminal YP_RS08460 IPR015890 Chorismate binding, C-terminal YP_RS08460 IPR019999 Anthranilate synthase component I - like YP_RS08465 IPR000059 NUDIX hydrolase, NudL, conserved site YP_RS08465 IPR000086 NUDIX hydrolase domain YP_RS08465 IPR015797 NUDIX hydrolase domain-like YP_RS08465 IPR023735 Uncharacterised nudix hydrolase NudL YP_RS08470 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YP_RS08470 IPR005130 Serine dehydratase-like, alpha subunit YP_RS08470 IPR005131 Serine dehydratase beta chain YP_RS08470 IPR029009 Allosteric substrate binding domain YP_RS08475 IPR002563 Flavin reductase-like, FMN-binding YP_RS08475 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component YP_RS08475 IPR012349 FMN-binding split barrel YP_RS08480 IPR004925 HpaB/PvcC/4-BUDH YP_RS08480 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YP_RS08480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YP_RS08480 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YP_RS08480 IPR024674 HpaB/PvcC/4-BUDH N-terminal YP_RS08480 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YP_RS08480 IPR024719 HpaB/PvcC/4-BUDH C-terminal YP_RS08485 IPR011701 Major facilitator superfamily YP_RS08485 IPR012707 4-hydroxyphenylacetate permease YP_RS08485 IPR020846 Major facilitator superfamily domain YP_RS08485 IPR024671 Autophagy-related protein 22-like YP_RS08490 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YP_RS08490 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_RS08490 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS08495 IPR011234 Fumarylacetoacetase, C-terminal-related YP_RS08495 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_RS08500 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YP_RS08500 IPR014347 Tautomerase/MIF superfamily YP_RS08505 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_RS08505 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe YP_RS08510 IPR015590 Aldehyde dehydrogenase domain YP_RS08510 IPR016160 Aldehyde dehydrogenase, cysteine active site YP_RS08510 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS08510 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS08510 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS08510 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YP_RS08515 IPR011234 Fumarylacetoacetase, C-terminal-related YP_RS08515 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YP_RS08520 IPR011234 Fumarylacetoacetase, C-terminal-related YP_RS08520 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YP_RS08525 IPR000835 MarR-type HTH domain YP_RS08525 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08525 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR YP_RS08530 IPR000644 CBS domain YP_RS08530 IPR005170 Transporter-associated domain YP_RS08530 IPR005496 Integral membrane protein TerC YP_RS08530 IPR016166 FAD-binding, type 2 YP_RS08530 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS08535 IPR004701 Phosphotransferase system, mannose-type IIA component YP_RS08535 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YP_RS08535 IPR013789 Phosphotransferase system, mannose family IIA component YP_RS08535 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YP_RS08540 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YP_RS08545 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YP_RS08545 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup YP_RS08550 IPR009328 Protein of unknown function DUF986 YP_RS08555 IPR003810 Domain of unknown function DUF204 YP_RS08555 IPR022929 Putative manganese efflux pump MntP YP_RS08560 IPR000531 TonB-dependent receptor, beta-barrel YP_RS08560 IPR010105 TonB-dependent siderophore receptor YP_RS08560 IPR010917 TonB-dependent receptor, conserved site YP_RS08560 IPR012910 TonB-dependent receptor, plug YP_RS08560 IPR030149 YP_RS08560 YP_RS08565 IPR001584 Integrase, catalytic core YP_RS08565 IPR006120 Resolvase, HTH domain YP_RS08565 IPR009057 Homeodomain-like YP_RS08565 IPR012337 Ribonuclease H-like domain YP_RS08570 IPR001270 ClpA/B family YP_RS08570 IPR002611 IstB-like ATP-binding protein YP_RS08570 IPR003593 AAA+ ATPase domain YP_RS08570 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08570 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS08575 IPR007985 Haemolysin expression modulating, HHA YP_RS08585 IPR021364 Protein of unknown function DUF2857 YP_RS08595 IPR010260 Bacteriophage P4, Orf88 YP_RS08610 IPR000531 TonB-dependent receptor, beta-barrel YP_RS08610 IPR010105 TonB-dependent siderophore receptor YP_RS08610 IPR012910 TonB-dependent receptor, plug YP_RS08615 IPR000873 AMP-dependent synthetase/ligase YP_RS08615 IPR020845 AMP-binding, conserved site YP_RS08615 IPR025110 AMP-binding enzyme C-terminal domain YP_RS08620 IPR001031 Thioesterase YP_RS08620 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YP_RS08620 IPR029058 Alpha/Beta hydrolase fold YP_RS08625 IPR000683 Oxidoreductase, N-terminal YP_RS08625 IPR010091 Thiazolinyl imide reductase YP_RS08625 IPR016040 NAD(P)-binding domain YP_RS08630 IPR001031 Thioesterase YP_RS08630 IPR001227 Acyl transferase domain YP_RS08630 IPR001242 Condensation domain YP_RS08630 IPR006162 Phosphopantetheine attachment site YP_RS08630 IPR009081 Acyl carrier protein-like YP_RS08630 IPR013217 Methyltransferase type 12 YP_RS08630 IPR013624 Non-ribosomal peptide synthetase YP_RS08630 IPR013968 Polyketide synthase, KR YP_RS08630 IPR014030 Beta-ketoacyl synthase, N-terminal YP_RS08630 IPR014031 Beta-ketoacyl synthase, C-terminal YP_RS08630 IPR014043 Acyl transferase YP_RS08630 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YP_RS08630 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YP_RS08630 IPR016039 Thiolase-like YP_RS08630 IPR016040 NAD(P)-binding domain YP_RS08630 IPR018201 Beta-ketoacyl synthase, active site YP_RS08630 IPR020801 Polyketide synthase, acyl transferase domain YP_RS08630 IPR020802 Polyketide synthase, thioesterase domain YP_RS08630 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YP_RS08630 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YP_RS08630 IPR029058 Alpha/Beta hydrolase fold YP_RS08630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS08630 IPR032821 YP_RS08630 YP_RS08635 IPR000873 AMP-dependent synthetase/ligase YP_RS08635 IPR001242 Condensation domain YP_RS08635 IPR006162 Phosphopantetheine attachment site YP_RS08635 IPR009081 Acyl carrier protein-like YP_RS08635 IPR010071 Amino acid adenylation domain YP_RS08635 IPR013217 Methyltransferase type 12 YP_RS08635 IPR013624 Non-ribosomal peptide synthetase YP_RS08635 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YP_RS08635 IPR020845 AMP-binding, conserved site YP_RS08635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS08640 IPR009057 Homeodomain-like YP_RS08640 IPR018060 DNA binding HTH domain, AraC-type YP_RS08640 IPR018062 HTH domain AraC-type, conserved site YP_RS08640 IPR020449 Transcription regulator HTH, AraC- type YP_RS08645 IPR003439 ABC transporter-like YP_RS08645 IPR003593 AAA+ ATPase domain YP_RS08645 IPR011527 ABC transporter type 1, transmembrane domain YP_RS08645 IPR017871 ABC transporter, conserved site YP_RS08645 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08650 IPR003439 ABC transporter-like YP_RS08650 IPR003593 AAA+ ATPase domain YP_RS08650 IPR011527 ABC transporter type 1, transmembrane domain YP_RS08650 IPR017871 ABC transporter, conserved site YP_RS08650 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08655 IPR011701 Major facilitator superfamily YP_RS08655 IPR020846 Major facilitator superfamily domain YP_RS08660 IPR005801 ADC synthase YP_RS08660 IPR015890 Chorismate binding, C-terminal YP_RS08660 IPR019996 Salicylate synthase YP_RS08665 IPR002104 Integrase, catalytic YP_RS08665 IPR004107 Integrase, SAM-like, N-terminal YP_RS08665 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS08665 IPR013762 Integrase-like, catalytic core YP_RS08665 IPR023109 Integrase/recombinase, N-terminal YP_RS08665 IPR025166 Domain of unknown function DUF4102 YP_RS08675 IPR001829 Pili assembly chaperone, bacterial YP_RS08675 IPR008962 PapD-like YP_RS08675 IPR016147 PapD, N-terminal, bacterial YP_RS08675 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS08675 IPR018046 Pili assembly chaperone, conserved site YP_RS08680 IPR000259 Fimbrial-type adhesion domain YP_RS08680 IPR008966 Adhesion domain YP_RS08680 IPR011228 Uncharacterised conserved protein UCP029766 YP_RS08685 IPR000015 Outer membrane usher protein YP_RS08685 IPR025885 PapC, N-terminal domain YP_RS08685 IPR025949 PapC-like, C-terminal domain YP_RS08690 IPR001829 Pili assembly chaperone, bacterial YP_RS08690 IPR008962 PapD-like YP_RS08690 IPR016147 PapD, N-terminal, bacterial YP_RS08690 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS08695 IPR000259 Fimbrial-type adhesion domain YP_RS08695 IPR008966 Adhesion domain YP_RS08700 IPR001638 Extracellular solute-binding protein, family 3 YP_RS08700 IPR001789 Signal transduction response regulator, receiver domain YP_RS08700 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS08700 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS08700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS08700 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YP_RS08700 IPR011006 CheY-like superfamily YP_RS08705 IPR000792 Transcription regulator LuxR, C-terminal YP_RS08705 IPR001789 Signal transduction response regulator, receiver domain YP_RS08705 IPR011006 CheY-like superfamily YP_RS08705 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08705 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS08710 IPR003702 Acetyl-CoA hydrolase/transferase YP_RS08710 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YP_RS08715 IPR002539 MaoC-like domain YP_RS08715 IPR029069 HotDog domain YP_RS08720 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YP_RS08720 IPR011206 Citrate lyase beta subunit-like YP_RS08720 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS08725 IPR000847 Transcription regulator HTH, LysR YP_RS08725 IPR005119 LysR, substrate-binding YP_RS08725 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08730 IPR013783 Immunoglobulin-like fold YP_RS08740 IPR005829 Sugar transporter, conserved site YP_RS08740 IPR011701 Major facilitator superfamily YP_RS08740 IPR020846 Major facilitator superfamily domain YP_RS08745 IPR006680 Amidohydrolase 1 YP_RS08745 IPR032466 YP_RS08745 YP_RS08750 IPR000847 Transcription regulator HTH, LysR YP_RS08750 IPR005119 LysR, substrate-binding YP_RS08750 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08755 IPR003667 Electron transport complex, Rnf/Nqr YP_RS08755 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YP_RS08760 IPR004839 Aminotransferase, class I/classII YP_RS08760 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS08760 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS08760 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS08765 IPR002293 Amino acid/polyamine transporter I YP_RS08765 IPR004840 Amino acid permease, conserved site YP_RS08765 IPR004841 Amino acid permease/ SLC12A domain YP_RS08770 IPR001034 HTH DeoR N-terminal domain YP_RS08770 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08770 IPR014036 DeoR C-terminal sensor domain YP_RS08770 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YP_RS08775 IPR012338 Beta-lactamase/transpeptidase-like YP_RS08775 IPR015868 Glutaminase YP_RS08780 IPR011701 Major facilitator superfamily YP_RS08780 IPR020846 Major facilitator superfamily domain YP_RS08785 IPR004923 Iron permease FTR1/Fip1/EfeU YP_RS08790 IPR018470 Periplasmic metal-binding protein Tp34-type YP_RS08795 IPR007029 YHS domain YP_RS08795 IPR018758 Domain of unknown function DUF2318, membrane YP_RS08800 IPR003838 Permease FtsX-like YP_RS08805 IPR003838 Permease FtsX-like YP_RS08805 IPR025857 MacB-like periplasmic core domain YP_RS08810 IPR003439 ABC transporter-like YP_RS08810 IPR003593 AAA+ ATPase domain YP_RS08810 IPR017871 ABC transporter, conserved site YP_RS08810 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08815 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YP_RS08815 IPR012336 Thioredoxin-like fold YP_RS08820 IPR009056 Cytochrome c-like domain YP_RS08825 IPR004537 Tellurite resistance methyltransferase, TehB YP_RS08825 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YP_RS08825 IPR014710 RmlC-like jelly roll fold YP_RS08825 IPR015392 Domain of unknown function DUF1971 YP_RS08825 IPR015985 Tellurite resistance methyltransferase TehB-like domain YP_RS08825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS08830 IPR000587 Creatinase, N-terminal YP_RS08830 IPR000994 Peptidase M24, structural domain YP_RS08830 IPR028980 Creatinase/Aminopeptidase P, N-terminal YP_RS08830 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YP_RS08835 IPR011990 Tetratricopeptide-like helical domain YP_RS08835 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YP_RS08840 IPR002509 Polysaccharide deacetylase YP_RS08840 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YP_RS08840 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YP_RS08840 IPR032772 YP_RS08840 YP_RS08845 IPR001173 Glycosyltransferase 2-like YP_RS08845 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA YP_RS08845 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS08850 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YP_RS08855 IPR000182 GNAT domain YP_RS08855 IPR016181 Acyl-CoA N-acyltransferase YP_RS08860 IPR001207 Transposase, mutator type YP_RS08870 IPR003714 PhoH-like protein YP_RS08870 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08875 IPR004713 Calcium/proton exchanger YP_RS08875 IPR004837 Sodium/calcium exchanger membrane region YP_RS08880 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS08880 IPR003660 HAMP linker domain YP_RS08880 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YP_RS08880 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing YP_RS08880 IPR029095 NarX-like, N-terminal YP_RS08885 IPR000524 Transcription regulator HTH, GntR YP_RS08885 IPR004839 Aminotransferase, class I/classII YP_RS08885 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS08885 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS08885 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS08885 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS08895 IPR004636 Acetylornithine/Succinylornithine transaminase family YP_RS08895 IPR005814 Aminotransferase class-III YP_RS08895 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS08895 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS08895 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS08895 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YP_RS08895 IPR026330 Succinylornithine transaminase YP_RS08900 IPR007041 Arginine N-succinyltransferase Ast/AOST YP_RS08900 IPR016181 Acyl-CoA N-acyltransferase YP_RS08900 IPR017650 Arginine N-succinyltransferase AstA YP_RS08905 IPR015590 Aldehyde dehydrogenase domain YP_RS08905 IPR016160 Aldehyde dehydrogenase, cysteine active site YP_RS08905 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS08905 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS08905 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS08905 IPR017649 Succinylglutamic semialdehyde dehydrogenase YP_RS08905 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YP_RS08910 IPR007079 Succinylarginine dihydrolase YP_RS08915 IPR007036 Succinylglutamate desuccinylase/aspartoacylase YP_RS08915 IPR016681 Succinylglutamate desuccinylase YP_RS08920 IPR001702 Porin, Gram-negative type YP_RS08920 IPR001897 Porin, gammaproteobacterial YP_RS08920 IPR023614 Porin domain YP_RS08925 IPR002508 Cell wall hydrolase/autolysin, catalytic YP_RS08925 IPR007709 N-formylglutamate amidohydrolase YP_RS08925 IPR010247 N-formylglutamate deformylase YP_RS08930 IPR005920 Imidazolonepropionase YP_RS08930 IPR006680 Amidohydrolase 1 YP_RS08930 IPR011059 Metal-dependent hydrolase, composite domain YP_RS08930 IPR032466 YP_RS08930 YP_RS08935 IPR011663 UbiC transcription regulator-associated YP_RS08935 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YP_RS08940 IPR001270 ClpA/B family YP_RS08940 IPR002611 IstB-like ATP-binding protein YP_RS08940 IPR003593 AAA+ ATPase domain YP_RS08940 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS08940 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS08945 IPR001584 Integrase, catalytic core YP_RS08945 IPR006120 Resolvase, HTH domain YP_RS08945 IPR009057 Homeodomain-like YP_RS08945 IPR012337 Ribonuclease H-like domain YP_RS08950 IPR007374 ASCH domain YP_RS08950 IPR009326 Protein of unknown function DUF984 YP_RS08950 IPR015947 PUA-like domain YP_RS08955 IPR009950 Protein of unknown function DUF1480 YP_RS08960 IPR007893 Spore coat protein U YP_RS08965 IPR000015 Outer membrane usher protein YP_RS08965 IPR025949 PapC-like, C-terminal domain YP_RS08970 IPR008962 PapD-like YP_RS08970 IPR016147 PapD, N-terminal, bacterial YP_RS08975 IPR007893 Spore coat protein U YP_RS08980 IPR007893 Spore coat protein U YP_RS08985 IPR007893 Spore coat protein U YP_RS08990 IPR003399 Mammalian cell entry-related YP_RS08995 IPR005219 Conserved hypothetical protein CHP00155 YP_RS08995 IPR007498 Paraquat-inducible protein A YP_RS09000 IPR003018 GAF domain YP_RS09000 IPR029016 GAF domain-like YP_RS09005 IPR016103 ProQ/FinO domain YP_RS09005 IPR023529 Transporter ProP effector, ProQ YP_RS09010 IPR001478 PDZ domain YP_RS09010 IPR004447 C-terminal-processing peptidase S41A YP_RS09010 IPR005151 Tail specific protease YP_RS09010 IPR020992 Tail specific protease, C-terminal YP_RS09010 IPR029045 ClpP/crotonase-like domain YP_RS09015 IPR001915 Peptidase M48 YP_RS09015 IPR022919 Peptidase M48, protease HtpX, putative YP_RS09020 IPR000259 Fimbrial-type adhesion domain YP_RS09020 IPR008966 Adhesion domain YP_RS09025 IPR001829 Pili assembly chaperone, bacterial YP_RS09025 IPR008962 PapD-like YP_RS09025 IPR016147 PapD, N-terminal, bacterial YP_RS09025 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS09025 IPR018046 Pili assembly chaperone, conserved site YP_RS09030 IPR000015 Outer membrane usher protein YP_RS09030 IPR018030 Fimbrial membrane usher, conserved site YP_RS09030 IPR025885 PapC, N-terminal domain YP_RS09030 IPR025949 PapC-like, C-terminal domain YP_RS09035 IPR000259 Fimbrial-type adhesion domain YP_RS09035 IPR008966 Adhesion domain YP_RS09040 IPR001829 Pili assembly chaperone, bacterial YP_RS09040 IPR008962 PapD-like YP_RS09040 IPR016147 PapD, N-terminal, bacterial YP_RS09040 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS09040 IPR018046 Pili assembly chaperone, conserved site YP_RS09045 IPR011701 Major facilitator superfamily YP_RS09045 IPR020846 Major facilitator superfamily domain YP_RS09050 IPR015943 WD40/YVTN repeat-like-containing domain YP_RS09050 IPR027946 Oligogalacturonate lyase domain YP_RS09055 IPR005471 Transcription regulator IclR, N-terminal YP_RS09055 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09055 IPR014757 Transcription regulator IclR, C-terminal YP_RS09055 IPR029016 GAF domain-like YP_RS09060 IPR002477 Peptidoglycan binding-like YP_RS09060 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YP_RS09065 IPR001991 Sodium:dicarboxylate symporter YP_RS09070 IPR007404 Protein of unknown function DUF457 YP_RS09070 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted YP_RS09075 IPR009331 Oligogalacturonate-specific porin YP_RS09080 IPR006059 Bacterial extracellular solute-binding, family 1 YP_RS09085 IPR003439 ABC transporter-like YP_RS09085 IPR003593 AAA+ ATPase domain YP_RS09085 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS09085 IPR017871 ABC transporter, conserved site YP_RS09085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09090 IPR000515 MetI-like domain YP_RS09095 IPR000515 MetI-like domain YP_RS09100 IPR010702 Periplasmic pectate lyase YP_RS09105 IPR002347 Glucose/ribitol dehydrogenase YP_RS09105 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YP_RS09105 IPR016040 NAD(P)-binding domain YP_RS09105 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS09110 IPR007045 5-keto 4-deoxyuronate isomerase YP_RS09110 IPR011051 RmlC-like cupin domain YP_RS09110 IPR021120 KduI/IolB isomerase YP_RS09110 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain YP_RS09110 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain YP_RS09115 IPR011051 RmlC-like cupin domain YP_RS09115 IPR013096 Cupin 2, conserved barrel YP_RS09115 IPR014710 RmlC-like jelly roll fold YP_RS09115 IPR025499 Pectin degradation protein KdgF YP_RS09120 IPR001207 Transposase, mutator type YP_RS09125 IPR008816 Glycine zipper 2TM domain YP_RS09130 IPR001650 Helicase, C-terminal YP_RS09130 IPR003711 CarD-like/TRCF domain YP_RS09130 IPR004576 Transcription-repair coupling factor YP_RS09130 IPR005118 Transcription-repair-coupling factor, C-terminal domain YP_RS09130 IPR011545 DEAD/DEAH box helicase domain YP_RS09130 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS09130 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09140 IPR003439 ABC transporter-like YP_RS09140 IPR003593 AAA+ ATPase domain YP_RS09140 IPR011924 Lipoprotein releasing system, ATP-binding protein YP_RS09140 IPR017871 ABC transporter, conserved site YP_RS09140 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09145 IPR003838 Permease FtsX-like YP_RS09145 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family YP_RS09145 IPR011926 Lipoprotein releasing system, transmembrane protein LolE YP_RS09145 IPR025857 MacB-like periplasmic core domain YP_RS09150 IPR000600 ROK YP_RS09155 IPR003000 Sirtuin family YP_RS09155 IPR026591 Sirtuin family, catalytic core small domain YP_RS09155 IPR027546 Sirtuin, class III YP_RS09155 IPR029035 DHS-like NAD/FAD-binding domain YP_RS09160 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YP_RS09160 IPR002933 Peptidase M20 YP_RS09160 IPR010161 Peptidase M20B, tripeptide aminopeptidase YP_RS09160 IPR011650 Peptidase M20, dimerisation domain YP_RS09165 IPR003347 JmjC domain YP_RS09170 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS09170 IPR003660 HAMP linker domain YP_RS09170 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS09170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS09170 IPR015014 PhoQ Sensor YP_RS09175 IPR001789 Signal transduction response regulator, receiver domain YP_RS09175 IPR001867 Signal transduction response regulator, C-terminal YP_RS09175 IPR011006 CheY-like superfamily YP_RS09175 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09180 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS09180 IPR027385 Outer membrane protein beta-barrel YP_RS09185 IPR000362 Fumarate lyase family YP_RS09185 IPR004769 Adenylosuccinate lyase YP_RS09185 IPR008948 L-Aspartase-like YP_RS09185 IPR013539 Adenylosuccinate lyase PurB, C-terminal YP_RS09185 IPR020557 Fumarate lyase, conserved site YP_RS09185 IPR022761 Fumarate lyase, N-terminal YP_RS09185 IPR024083 Fumarase/histidase, N-terminal YP_RS09190 IPR007451 Uncharacterised protein family UPF0274 YP_RS09195 IPR004506 tRNA-specific 2-thiouridylase YP_RS09195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS09195 IPR023382 Adenine nucleotide alpha hydrolase-like domains YP_RS09200 IPR000086 NUDIX hydrolase domain YP_RS09200 IPR015797 NUDIX hydrolase domain-like YP_RS09200 IPR020084 NUDIX hydrolase, conserved site YP_RS09200 IPR020476 NUDIX hydrolase YP_RS09205 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YP_RS09205 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YP_RS09205 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YP_RS09205 IPR020103 Pseudouridine synthase, catalytic domain YP_RS09210 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YP_RS09210 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YP_RS09210 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YP_RS09210 IPR024084 Isopropylmalate dehydrogenase-like domain YP_RS09215 IPR000843 Transcription regulator HTH, LacI YP_RS09215 IPR001761 Periplasmic binding protein/LacI sugar binding domain YP_RS09215 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS09215 IPR028082 Periplasmic binding protein-like I YP_RS09225 IPR000014 PAS domain YP_RS09225 IPR001610 PAC motif YP_RS09225 IPR003660 HAMP linker domain YP_RS09225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YP_RS09225 IPR004090 Chemotaxis methyl-accepting receptor YP_RS09225 IPR013655 PAS fold-3 YP_RS09230 IPR008030 NmrA-like domain YP_RS09230 IPR016040 NAD(P)-binding domain YP_RS09235 IPR002577 Helix-turn-helix, HxlR type YP_RS09235 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09245 IPR000560 Histidine phosphatase superfamily, clade-2 YP_RS09245 IPR029033 Histidine phosphatase superfamily YP_RS09245 IPR033379 YP_RS09245 YP_RS09250 IPR017704 Putative selenium-binding protein YdfZ YP_RS09255 IPR021266 Kdo hydroxylase YP_RS09260 IPR000485 AsnC-type HTH domain YP_RS09260 IPR011008 Dimeric alpha-beta barrel YP_RS09260 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09260 IPR019887 Transcription regulator AsnC-type, C-terminal YP_RS09260 IPR019888 Transcription regulator AsnC-type YP_RS09265 IPR019713 Inner membrane protein YlaC YP_RS09270 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YP_RS09270 IPR011032 GroES (chaperonin 10)-like YP_RS09270 IPR013149 Alcohol dehydrogenase, C-terminal YP_RS09270 IPR013154 Alcohol dehydrogenase GroES-like YP_RS09270 IPR014189 Quinone oxidoreductase PIG3 YP_RS09270 IPR016040 NAD(P)-binding domain YP_RS09270 IPR020843 Polyketide synthase, enoylreductase YP_RS09275 IPR004199 Beta galactosidase small chain/ domain 5 YP_RS09275 IPR006101 Glycoside hydrolase, family 2 YP_RS09275 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YP_RS09275 IPR006103 Glycoside hydrolase, family 2, TIM barrel YP_RS09275 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YP_RS09275 IPR008979 Galactose-binding domain-like YP_RS09275 IPR011013 Galactose mutarotase-like domain YP_RS09275 IPR013781 Glycoside hydrolase, catalytic domain YP_RS09275 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain YP_RS09275 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YP_RS09275 IPR017853 Glycoside hydrolase, superfamily YP_RS09275 IPR023230 Glycoside hydrolase, family 2, conserved site YP_RS09275 IPR023232 Glycoside hydrolase, family 2, active site YP_RS09275 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YP_RS09275 IPR032312 YP_RS09275 YP_RS09280 IPR002059 Cold-shock protein, DNA-binding YP_RS09280 IPR011129 Cold shock protein YP_RS09280 IPR012156 Cold shock, CspA YP_RS09280 IPR012340 Nucleic acid-binding, OB-fold YP_RS09280 IPR019844 Cold-shock conserved site YP_RS09285 IPR019717 Dextransucrase DSRB YP_RS09300 IPR003416 MgtC/SapB/SrpB transporter YP_RS09305 IPR001757 Cation-transporting P-type ATPase YP_RS09305 IPR004014 Cation-transporting P-type ATPase, N-terminal YP_RS09305 IPR006068 Cation-transporting P-type ATPase, C-terminal YP_RS09305 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB YP_RS09305 IPR008250 P-type ATPase, A domain YP_RS09305 IPR018303 P-type ATPase, phosphorylation site YP_RS09305 IPR023214 HAD-like domain YP_RS09305 IPR023298 P-type ATPase, transmembrane domain YP_RS09305 IPR023299 P-type ATPase, cytoplasmic domain N YP_RS09315 IPR007944 Flagellar transcriptional activator FlhC YP_RS09320 IPR000540 Flagellar motor protein MotA, conserved site YP_RS09320 IPR002898 MotA/TolQ/ExbB proton channel YP_RS09320 IPR022522 Flagellar motor stator, MotA YP_RS09325 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS09325 IPR025713 Motility protein B, N-terminal domain YP_RS09330 IPR002545 CheW-like protein YP_RS09330 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS09330 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS09330 IPR004105 Histidine kinase CheA-like, homodimeric domain YP_RS09330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS09330 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YP_RS09330 IPR015162 CheY binding YP_RS09335 IPR002545 CheW-like protein YP_RS09340 IPR011701 Major facilitator superfamily YP_RS09340 IPR020846 Major facilitator superfamily domain YP_RS09345 IPR006056 Enamine/imine deaminase YjgF-like YP_RS09345 IPR006175 YjgF/Yer057p/UK114 family YP_RS09345 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YP_RS09350 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS09355 IPR013559 YheO-like YP_RS09360 IPR001207 Transposase, mutator type YP_RS09365 IPR005546 Autotransporter beta-domain YP_RS09365 IPR006315 Outer membrane autotransporter barrel YP_RS09365 IPR011050 Pectin lyase fold/virulence factor YP_RS09365 IPR012332 P22 tailspike C-terminal domain-like YP_RS09370 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein YP_RS09370 IPR019286 Protein of unknown function DUF2339, transmembrane YP_RS09380 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YP_RS09380 IPR003660 HAMP linker domain YP_RS09380 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YP_RS09380 IPR004090 Chemotaxis methyl-accepting receptor YP_RS09380 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YP_RS09385 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YP_RS09385 IPR003660 HAMP linker domain YP_RS09385 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YP_RS09385 IPR004090 Chemotaxis methyl-accepting receptor YP_RS09385 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YP_RS09390 IPR000780 MCP methyltransferase, CheR-type YP_RS09390 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal YP_RS09390 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YP_RS09390 IPR026024 Chemotaxis protein methyltransferase CheR YP_RS09390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS09395 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YP_RS09395 IPR001789 Signal transduction response regulator, receiver domain YP_RS09395 IPR008248 Signal transduction response regulator, chemotaxis, CheB YP_RS09395 IPR011006 CheY-like superfamily YP_RS09400 IPR001789 Signal transduction response regulator, receiver domain YP_RS09400 IPR011006 CheY-like superfamily YP_RS09405 IPR007439 Chemotaxis phosphatase, CheZ YP_RS09415 IPR002477 Peptidoglycan binding-like YP_RS09415 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YP_RS09420 IPR008635 Coiled stalk of trimeric autotransporter adhesin YP_RS09420 IPR008640 Head domain of trimeric autotransporter adhesin YP_RS09420 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS09425 IPR005594 YadA-like, C-terminal YP_RS09425 IPR008635 Coiled stalk of trimeric autotransporter adhesin YP_RS09425 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS09435 IPR001207 Transposase, mutator type YP_RS09440 IPR000821 Alanine racemase YP_RS09440 IPR001608 Alanine racemase, N-terminal YP_RS09440 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YP_RS09440 IPR029066 PLP-binding barrel YP_RS09455 IPR002641 Patatin/Phospholipase A2-related YP_RS09455 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YP_RS09465 IPR001270 ClpA/B family YP_RS09465 IPR002611 IstB-like ATP-binding protein YP_RS09465 IPR003593 AAA+ ATPase domain YP_RS09465 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09465 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS09470 IPR001584 Integrase, catalytic core YP_RS09470 IPR006120 Resolvase, HTH domain YP_RS09470 IPR009057 Homeodomain-like YP_RS09470 IPR012337 Ribonuclease H-like domain YP_RS09475 IPR000524 Transcription regulator HTH, GntR YP_RS09475 IPR011663 UbiC transcription regulator-associated YP_RS09475 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09475 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YP_RS09480 IPR006680 Amidohydrolase 1 YP_RS09480 IPR010252 Formiminoglutamate deiminase YP_RS09480 IPR011059 Metal-dependent hydrolase, composite domain YP_RS09480 IPR032466 YP_RS09480 YP_RS09485 IPR010282 Uncharacterised protein family HutD/Ves YP_RS09485 IPR011051 RmlC-like cupin domain YP_RS09485 IPR014710 RmlC-like jelly roll fold YP_RS09490 IPR005801 ADC synthase YP_RS09490 IPR015890 Chorismate binding, C-terminal YP_RS09495 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_RS09495 IPR016039 Thiolase-like YP_RS09500 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YP_RS09500 IPR016039 Thiolase-like YP_RS09505 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS09505 IPR016040 NAD(P)-binding domain YP_RS09510 IPR001279 Beta-lactamase-like YP_RS09515 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related YP_RS09520 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS09520 IPR016040 NAD(P)-binding domain YP_RS09525 IPR025993 Ceramide glucosyltransferase YP_RS09525 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS09545 IPR001207 Transposase, mutator type YP_RS09550 IPR006597 Sel1-like YP_RS09550 IPR011652 MORN variant YP_RS09550 IPR011990 Tetratricopeptide-like helical domain YP_RS09555 IPR006597 Sel1-like YP_RS09555 IPR011990 Tetratricopeptide-like helical domain YP_RS09555 IPR025115 Domain of unknown function DUF4034 YP_RS09565 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YP_RS09565 IPR022133 Ribose-5-phosphate isomerase, C-terminal YP_RS09570 IPR013217 Methyltransferase type 12 YP_RS09570 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted YP_RS09570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS09575 IPR002347 Glucose/ribitol dehydrogenase YP_RS09575 IPR016040 NAD(P)-binding domain YP_RS09575 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS09580 IPR011051 RmlC-like cupin domain YP_RS09585 IPR011051 RmlC-like cupin domain YP_RS09590 IPR011989 Armadillo-like helical YP_RS09590 IPR016024 Armadillo-type fold YP_RS09595 IPR000073 Alpha/beta hydrolase fold-1 YP_RS09595 IPR029058 Alpha/Beta hydrolase fold YP_RS09600 IPR011051 RmlC-like cupin domain YP_RS09600 IPR013096 Cupin 2, conserved barrel YP_RS09600 IPR014710 RmlC-like jelly roll fold YP_RS09605 IPR003779 Carboxymuconolactone decarboxylase-like YP_RS09605 IPR029032 AhpD-like YP_RS09610 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS09610 IPR003660 HAMP linker domain YP_RS09610 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS09610 IPR006290 Heavy metal sensor kinase YP_RS09615 IPR001789 Signal transduction response regulator, receiver domain YP_RS09615 IPR001867 Signal transduction response regulator, C-terminal YP_RS09615 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YP_RS09615 IPR011006 CheY-like superfamily YP_RS09615 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09615 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS09620 IPR002925 Dienelactone hydrolase YP_RS09620 IPR029058 Alpha/Beta hydrolase fold YP_RS09625 IPR008254 Flavodoxin/nitric oxide synthase YP_RS09625 IPR029039 Flavoprotein-like YP_RS09630 IPR016174 Di-haem cytochrome, transmembrane YP_RS09630 IPR025517 Domain of unknown function DUF4405 YP_RS09635 IPR025145 Protein of unknown function DUF4087 YP_RS09640 IPR028082 Periplasmic binding protein-like I YP_RS09645 IPR013094 Alpha/beta hydrolase fold-3 YP_RS09645 IPR029058 Alpha/Beta hydrolase fold YP_RS09650 IPR001763 Rhodanese-like domain YP_RS09655 IPR001584 Integrase, catalytic core YP_RS09655 IPR012337 Ribonuclease H-like domain YP_RS09660 IPR009057 Homeodomain-like YP_RS09660 IPR010921 Trp repressor/replication initiator YP_RS09665 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YP_RS09665 IPR006073 GTP binding domain YP_RS09665 IPR012675 Beta-grasp domain YP_RS09665 IPR012676 TGS-like YP_RS09665 IPR013029 Domain of unknown function DUF933 YP_RS09665 IPR023192 TGS-like domain YP_RS09665 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09670 IPR001328 Peptidyl-tRNA hydrolase YP_RS09670 IPR018171 Peptidyl-tRNA hydrolase, conserved site YP_RS09675 IPR019698 Protein of unknown function DUF2583 YP_RS09685 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YP_RS09685 IPR005946 Ribose-phosphate diphosphokinase YP_RS09685 IPR029057 Phosphoribosyltransferase-like YP_RS09685 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YP_RS09695 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_RS09695 IPR006204 GHMP kinase N-terminal domain YP_RS09695 IPR013750 GHMP kinase, C-terminal domain YP_RS09695 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS09695 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS09700 IPR004565 Outer membrane lipoprotein LolB YP_RS09700 IPR029046 Lipoprotein localisation LolA/LolB/LppX YP_RS09705 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YP_RS09705 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YP_RS09705 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YP_RS09705 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YP_RS09705 IPR016040 NAD(P)-binding domain YP_RS09705 IPR018214 Glutamyl-tRNA reductase, conserved site YP_RS09710 IPR000352 Peptide chain release factor class I/class II YP_RS09710 IPR004373 Peptide chain release factor 1 YP_RS09710 IPR005139 Peptide chain release factor YP_RS09710 IPR014720 Double-stranded RNA-binding domain YP_RS09715 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS09715 IPR004556 Modification methylase HemK YP_RS09715 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YP_RS09715 IPR025714 Methyltransferase domain YP_RS09715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS09720 IPR007360 Invasion gene expression up-regulator, SirB YP_RS09725 IPR011990 Tetratricopeptide-like helical domain YP_RS09725 IPR032698 YP_RS09725 YP_RS09730 IPR006218 DAHP synthetase I/KDSA YP_RS09730 IPR006269 3-deoxy-8-phosphooctulonate synthase YP_RS09730 IPR013785 Aldolase-type TIM barrel YP_RS09735 IPR001902 Sulphate anion transporter YP_RS09735 IPR002645 STAS domain YP_RS09735 IPR011547 Sulphate transporter YP_RS09735 IPR018045 Sulphate anion transporter, conserved site YP_RS09750 IPR004129 Glycerophosphoryl diester phosphodiesterase YP_RS09750 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YP_RS09750 IPR030395 YP_RS09750 YP_RS09760 IPR000515 MetI-like domain YP_RS09765 IPR000515 MetI-like domain YP_RS09770 IPR003439 ABC transporter-like YP_RS09770 IPR017871 ABC transporter, conserved site YP_RS09770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09780 IPR003439 ABC transporter-like YP_RS09780 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09785 IPR004129 Glycerophosphoryl diester phosphodiesterase YP_RS09785 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YP_RS09785 IPR030395 YP_RS09785 YP_RS09790 IPR000600 ROK YP_RS09790 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09800 IPR003141 Polymerase/histidinol phosphatase, N-terminal YP_RS09800 IPR004013 PHP, C-terminal YP_RS09800 IPR016195 Polymerase/histidinol phosphatase-like YP_RS09800 IPR023710 Probable phosphatase YcdX YP_RS09805 IPR020945 DMSO/Nitrate reductase chaperone YP_RS09805 IPR026269 Tat proofreading chaperone DmsD-type YP_RS09810 IPR010835 Protein of unknown function DUF1439 YP_RS09815 IPR011701 Major facilitator superfamily YP_RS09815 IPR020846 Major facilitator superfamily domain YP_RS09815 IPR022855 Multidrug resistance protein MdtH YP_RS09820 IPR000182 GNAT domain YP_RS09820 IPR016181 Acyl-CoA N-acyltransferase YP_RS09825 IPR000683 Oxidoreductase, N-terminal YP_RS09825 IPR016040 NAD(P)-binding domain YP_RS09830 IPR004268 Flagellin assembly, membrane protein MviN YP_RS09835 IPR005565 Haemolysin activator HlyB YP_RS09835 IPR013686 Polypeptide-transport-associated, ShlB-type YP_RS09835 IPR027282 Two partner secretion pathway transporter YP_RS09845 IPR001278 Arginine-tRNA ligase YP_RS09845 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS09845 IPR005148 Arginyl tRNA synthetase N-terminal domain YP_RS09845 IPR008909 DALR anticodon binding YP_RS09845 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YP_RS09845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS09855 IPR010393 Protein of unknown function DUF991 YP_RS09855 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YP_RS09860 IPR005627 Copper homeostasis protein CutC YP_RS09860 IPR023648 Copper homeostasis CutC domain YP_RS09865 IPR010017 tRNA (mo5U34)-methyltransferase YP_RS09865 IPR027555 tRNA (mo5U34)-methyltransferase-like YP_RS09865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS09870 IPR005271 tRNA (cmo5U34)-methyltransferase YP_RS09870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS09875 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YP_RS09875 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain YP_RS09880 IPR002763 Protein of unknown function DUF72 YP_RS09885 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YP_RS09885 IPR004115 GAD-like domain YP_RS09885 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YP_RS09885 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YP_RS09885 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type YP_RS09885 IPR012340 Nucleic acid-binding, OB-fold YP_RS09885 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YP_RS09885 IPR029351 GAD domain YP_RS09890 IPR000086 NUDIX hydrolase domain YP_RS09890 IPR003564 dATP pyrophosphohydrolase YP_RS09890 IPR015797 NUDIX hydrolase domain-like YP_RS09890 IPR020084 NUDIX hydrolase, conserved site YP_RS09895 IPR002876 Transcriptional regulator TACO1-like YP_RS09895 IPR017856 Integrase, N-terminal zinc-binding domain-like YP_RS09895 IPR026563 Transcriptional regulator TACO1-like, domain 2 YP_RS09895 IPR026564 Transcriptional regulator TACO1-like, domain 3 YP_RS09895 IPR029072 YebC-like YP_RS09900 IPR002176 Crossover junction endodeoxyribonuclease RuvC YP_RS09900 IPR012337 Ribonuclease H-like domain YP_RS09900 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YP_RS09905 IPR000085 Bacterial DNA recombination protein RuvA YP_RS09905 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YP_RS09905 IPR010994 RuvA domain 2-like YP_RS09905 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal YP_RS09905 IPR012340 Nucleic acid-binding, OB-fold YP_RS09905 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YP_RS09910 IPR003593 AAA+ ATPase domain YP_RS09910 IPR004605 DNA helicase, Holliday junction RuvB type YP_RS09910 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal YP_RS09910 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal YP_RS09910 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09915 IPR001626 ABC-3 YP_RS09915 IPR029022 ABC transporter, BtuC-like YP_RS09920 IPR003439 ABC transporter-like YP_RS09920 IPR003593 AAA+ ATPase domain YP_RS09920 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09925 IPR006127 Periplasmic solute binding protein family YP_RS09930 IPR007340 Opacity-associated protein A YP_RS09930 IPR011055 Duplicated hybrid motif YP_RS09930 IPR013731 Opacity-associated protein A, N-terminal YP_RS09930 IPR016047 Peptidase M23 YP_RS09930 IPR018392 LysM domain YP_RS09935 IPR004960 Bacterial lipid A biosynthesis acyltransferase YP_RS09935 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_RS09940 IPR001697 Pyruvate kinase YP_RS09940 IPR011037 Pyruvate kinase-like, insert domain YP_RS09940 IPR015793 Pyruvate kinase, barrel YP_RS09940 IPR015794 Pyruvate kinase, alpha/beta YP_RS09940 IPR015795 Pyruvate kinase, C-terminal YP_RS09940 IPR015806 Pyruvate kinase, beta-barrel insert domain YP_RS09940 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS09940 IPR018209 Pyruvate kinase, active site YP_RS09945 IPR000281 Helix-turn-helix protein RpiR YP_RS09945 IPR001347 Sugar isomerase (SIS) YP_RS09945 IPR009057 Homeodomain-like YP_RS09945 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS09950 IPR001282 Glucose-6-phosphate dehydrogenase YP_RS09950 IPR016040 NAD(P)-binding domain YP_RS09950 IPR019796 Glucose-6-phosphate dehydrogenase, active site YP_RS09950 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YP_RS09950 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YP_RS09955 IPR000887 KDPG/KHG aldolase YP_RS09955 IPR013785 Aldolase-type TIM barrel YP_RS09955 IPR031337 YP_RS09955 YP_RS09955 IPR031338 YP_RS09955 YP_RS09960 IPR000390 Small multidrug resistance protein family YP_RS09960 IPR023740 Spermidine export protein MdtJ YP_RS09965 IPR000390 Small multidrug resistance protein family YP_RS09965 IPR023737 Spermidine export protein MdtI YP_RS09970 IPR006175 YjgF/Yer057p/UK114 family YP_RS09970 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YP_RS09970 IPR019897 YjgF-like protein, conserved site YP_RS09975 IPR006555 ATP-dependent helicase, C-terminal YP_RS09975 IPR010614 DEAD2 YP_RS09975 IPR011545 DEAD/DEAH box helicase domain YP_RS09975 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS09975 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS09980 IPR000905 Gcp-like domain YP_RS09980 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ YP_RS09985 IPR004658 Outer membrane lipoprotein Slp YP_RS09990 IPR000873 AMP-dependent synthetase/ligase YP_RS09990 IPR020845 AMP-binding, conserved site YP_RS09990 IPR025110 AMP-binding enzyme C-terminal domain YP_RS09995 IPR002121 HRDC domain YP_RS09995 IPR002562 3'-5' exonuclease domain YP_RS09995 IPR006292 Ribonuclease D YP_RS09995 IPR010997 HRDC-like YP_RS09995 IPR012337 Ribonuclease H-like domain YP_RS10000 IPR005527 Septum formation topological specificity factor MinE YP_RS10005 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YP_RS10005 IPR010223 ATP binding protein MinD, bacterial-type YP_RS10005 IPR025501 ATP binding protein MinD YP_RS10005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10010 IPR005526 Septum formation inhibitor MinC, C-terminal YP_RS10010 IPR007874 Septum formation inhibitor MinC, N-terminal YP_RS10010 IPR013033 Septum formation inhibitor MinC YP_RS10010 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YP_RS10015 IPR027354 YcgL domain YP_RS10020 IPR011757 Lytic transglycosylase MltB YP_RS10020 IPR011970 Lytic murein transglycosylase YP_RS10020 IPR023346 Lysozyme-like domain YP_RS10020 IPR031304 YP_RS10020 YP_RS10025 IPR011234 Fumarylacetoacetase, C-terminal-related YP_RS10030 IPR005358 Putative zinc- or iron-chelating domain containing protein YP_RS10030 IPR008228 Uncharacterised conserved protein UCP006173 YP_RS10035 IPR002104 Integrase, catalytic YP_RS10035 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS10035 IPR013762 Integrase-like, catalytic core YP_RS10035 IPR022000 Domain of unknown function (DUF3596) YP_RS10035 IPR023109 Integrase/recombinase, N-terminal YP_RS10040 IPR001584 Integrase, catalytic core YP_RS10040 IPR006120 Resolvase, HTH domain YP_RS10040 IPR009057 Homeodomain-like YP_RS10040 IPR012337 Ribonuclease H-like domain YP_RS10045 IPR001270 ClpA/B family YP_RS10045 IPR002611 IstB-like ATP-binding protein YP_RS10045 IPR003593 AAA+ ATPase domain YP_RS10045 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10045 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS10050 IPR009634 Bacteriophage 933W, Xis excisionase YP_RS10055 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YP_RS10055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS10060 IPR008711 Recombinase NinB YP_RS10065 IPR008713 Bacteriophage lambda NinG YP_RS10070 IPR010534 Bacteriophage 933W, GpQ YP_RS10075 IPR018880 Bacteriophage P4, Ash protein YP_RS10080 IPR003497 BRO N-terminal domain YP_RS10095 IPR001207 Transposase, mutator type YP_RS10100 IPR011701 Major facilitator superfamily YP_RS10100 IPR020846 Major facilitator superfamily domain YP_RS10105 IPR000192 Aminotransferase class V domain YP_RS10105 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS10105 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS10105 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS10105 IPR016454 Cysteine desulfurase, NifS YP_RS10120 IPR003752 Disulphide bond formation protein DsbB/BdbC YP_RS10120 IPR022920 Disulphide bond formation protein DsbB YP_RS10120 IPR023380 Disulphide bond formation protein DsbB-like domain YP_RS10125 IPR004671 Na+/H+ antiporter NhaB YP_RS10130 IPR000524 Transcription regulator HTH, GntR YP_RS10130 IPR008920 Transcription regulator FadR/GntR, C-terminal YP_RS10130 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10130 IPR014178 Fatty acid response transcription factor FadR YP_RS10130 IPR028374 FadR, C-terminal domain YP_RS10135 IPR007390 Sporulation stage V, protein R YP_RS10140 IPR006076 FAD dependent oxidoreductase YP_RS10140 IPR023080 D-amino acid dehydrogenase small subunit, DadA YP_RS10140 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS10145 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG YP_RS10145 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YP_RS10145 IPR005829 Sugar transporter, conserved site YP_RS10145 IPR011701 Major facilitator superfamily YP_RS10145 IPR020846 Major facilitator superfamily domain YP_RS10150 IPR003829 Pirin, N-terminal domain YP_RS10150 IPR008778 Pirin, C-terminal domain YP_RS10150 IPR011051 RmlC-like cupin domain YP_RS10150 IPR012093 Pirin YP_RS10150 IPR014710 RmlC-like jelly roll fold YP_RS10155 IPR000847 Transcription regulator HTH, LysR YP_RS10155 IPR005119 LysR, substrate-binding YP_RS10155 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10160 IPR000620 Drug/metabolite transporter YP_RS10165 IPR006698 Thermus phage phiYS40, Orf56 YP_RS10170 IPR010650 PrkA C-terminal domain YP_RS10170 IPR013153 PrkA AAA domain YP_RS10170 IPR016230 Serine-protein kinase, PrkA YP_RS10170 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10175 IPR010583 MltA-interacting MipA YP_RS10175 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS10180 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YP_RS10180 IPR011013 Galactose mutarotase-like domain YP_RS10180 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YP_RS10180 IPR025532 Glucose-6-phosphate 1-epimerase YP_RS10185 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YP_RS10185 IPR016040 NAD(P)-binding domain YP_RS10185 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YP_RS10185 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_RS10185 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YP_RS10185 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YP_RS10190 IPR002579 Peptide methionine sulphoxide reductase MrsB YP_RS10190 IPR011057 Mss4-like YP_RS10190 IPR028427 Peptide methionine sulfoxide reductase YP_RS10195 IPR009749 Protein of unknown function DUF1315 YP_RS10200 IPR000868 Isochorismatase-like YP_RS10205 IPR006033 L-asparaginase, type I YP_RS10205 IPR006034 Asparaginase/glutaminase YP_RS10205 IPR020827 Asparaginase/glutaminase, active site 1 YP_RS10205 IPR027473 L-asparaginase, C-terminal domain YP_RS10205 IPR027474 L-asparaginase, N-terminal YP_RS10205 IPR027475 Asparaginase/glutaminase, active site 2 YP_RS10210 IPR002142 Peptidase S49 YP_RS10210 IPR004634 Peptidase S49, protease IV YP_RS10210 IPR004635 Peptidase S49, SppA YP_RS10210 IPR029045 ClpP/crotonase-like domain YP_RS10215 IPR000415 Nitroreductase-like YP_RS10215 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YP_RS10215 IPR029479 Nitroreductase YP_RS10220 IPR004536 Selenide water dikinase YP_RS10220 IPR010918 AIR synthase-related protein, C-terminal domain YP_RS10220 IPR016188 PurM, N-terminal-like YP_RS10220 IPR023061 Selenide, water dikinase, class I YP_RS10225 IPR000380 DNA topoisomerase, type IA YP_RS10225 IPR003601 DNA topoisomerase, type IA, domain 2 YP_RS10225 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YP_RS10225 IPR005738 DNA topoisomerase III YP_RS10225 IPR006171 Toprim domain YP_RS10225 IPR013497 DNA topoisomerase, type IA, central YP_RS10225 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YP_RS10225 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YP_RS10225 IPR023405 DNA topoisomerase, type IA, core domain YP_RS10225 IPR023406 DNA topoisomerase, type IA, active site YP_RS10230 IPR009971 Protein of unknown function DUF1496 YP_RS10235 IPR000086 NUDIX hydrolase domain YP_RS10235 IPR015797 NUDIX hydrolase domain-like YP_RS10235 IPR020084 NUDIX hydrolase, conserved site YP_RS10235 IPR020476 NUDIX hydrolase YP_RS10240 IPR004808 AP endonuclease 1 YP_RS10240 IPR005135 Endonuclease/exonuclease/phosphatase YP_RS10240 IPR020847 AP endonuclease 1, binding site YP_RS10240 IPR020848 AP endonuclease 1, conserved site YP_RS10245 IPR000847 Transcription regulator HTH, LysR YP_RS10245 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10255 IPR002376 Formyl transferase, N-terminal YP_RS10255 IPR002912 ACT domain YP_RS10255 IPR004810 Formyltetrahydrofolate deformylase YP_RS10260 IPR004027 SEC-C motif YP_RS10260 IPR023006 Uncharacterised protein family UPF0225 YP_RS10260 IPR032710 YP_RS10260 YP_RS10265 IPR001789 Signal transduction response regulator, receiver domain YP_RS10265 IPR011006 CheY-like superfamily YP_RS10265 IPR028616 Regulator of RpoS YP_RS10270 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YP_RS10270 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS10270 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YP_RS10270 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YP_RS10270 IPR016040 NAD(P)-binding domain YP_RS10270 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YP_RS10270 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YP_RS10275 IPR001801 Histone-like protein H-NS YP_RS10275 IPR027444 Histone-like protein H-NS, C-terminal domain YP_RS10275 IPR027454 Histone-like protein H-NS family, oligomerisation domain YP_RS10280 IPR001267 Thymidine kinase YP_RS10280 IPR020633 Thymidine kinase, conserved site YP_RS10280 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10285 IPR001670 Alcohol dehydrogenase, iron-type YP_RS10285 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YP_RS10285 IPR015590 Aldehyde dehydrogenase domain YP_RS10285 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS10285 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS10285 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS10285 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YP_RS10290 IPR002771 Multiple antibiotic resistance (MarC)-related YP_RS10295 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS10295 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YP_RS10295 IPR030678 YP_RS10295 YP_RS10300 IPR000515 MetI-like domain YP_RS10305 IPR000515 MetI-like domain YP_RS10305 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YP_RS10310 IPR003439 ABC transporter-like YP_RS10310 IPR003593 AAA+ ATPase domain YP_RS10310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YP_RS10310 IPR017871 ABC transporter, conserved site YP_RS10310 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10315 IPR003439 ABC transporter-like YP_RS10315 IPR003593 AAA+ ATPase domain YP_RS10315 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YP_RS10315 IPR017871 ABC transporter, conserved site YP_RS10315 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10330 IPR007376 dsDNA mimic, putative YP_RS10335 IPR001736 Phospholipase D/Transphosphatidylase YP_RS10335 IPR022924 Cardiolipin synthase YP_RS10335 IPR025202 Phospholipase D-like domain YP_RS10335 IPR027379 Cardiolipin synthase N-terminal YP_RS10335 IPR030840 YP_RS10335 YP_RS10340 IPR000758 Virulence-related outer membrane protein YP_RS10340 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS10340 IPR027385 Outer membrane protein beta-barrel YP_RS10350 IPR005545 YCII-related YP_RS10350 IPR011008 Dimeric alpha-beta barrel YP_RS10355 IPR003538 Gram-negative bacterial TonB protein YP_RS10355 IPR006260 TonB, C-terminal YP_RS10360 IPR001207 Transposase, mutator type YP_RS10365 IPR006683 Thioesterase superfamily YP_RS10365 IPR029069 HotDog domain YP_RS10370 IPR006008 Intracellular septation protein A YP_RS10375 IPR001902 Sulphate anion transporter YP_RS10375 IPR011547 Sulphate transporter YP_RS10380 IPR001902 Sulphate anion transporter YP_RS10380 IPR002645 STAS domain YP_RS10385 IPR009627 Uncharacterised protein family UPF0259 YP_RS10395 IPR000758 Virulence-related outer membrane protein YP_RS10395 IPR005618 Outer membrane protein, OmpW YP_RS10395 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS10400 IPR007055 BON domain YP_RS10400 IPR014004 Transport-associated and nodulation domain, bacteria YP_RS10405 IPR002028 Tryptophan synthase, alpha chain YP_RS10405 IPR011060 Ribulose-phosphate binding barrel YP_RS10405 IPR013785 Aldolase-type TIM barrel YP_RS10405 IPR018204 Tryptophan synthase, alpha chain, active site YP_RS10410 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS10410 IPR006653 Tryptophan synthase, beta chain, conserved site YP_RS10410 IPR006654 Tryptophan synthase, beta chain YP_RS10410 IPR023026 Tryptophan synthase beta chain/beta chain-like YP_RS10415 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain YP_RS10415 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YP_RS10415 IPR011060 Ribulose-phosphate binding barrel YP_RS10415 IPR013785 Aldolase-type TIM barrel YP_RS10415 IPR013798 Indole-3-glycerol phosphate synthase YP_RS10420 IPR000312 Glycosyl transferase, family 3 YP_RS10420 IPR005940 Anthranilate phosphoribosyl transferase YP_RS10420 IPR017459 Glycosyl transferase family 3, N-terminal domain YP_RS10425 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YP_RS10425 IPR017926 Glutamine amidotransferase YP_RS10425 IPR029062 Class I glutamine amidotransferase-like YP_RS10430 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YP_RS10430 IPR005801 ADC synthase YP_RS10430 IPR006805 Anthranilate synthase component I, N-terminal YP_RS10430 IPR015890 Chorismate binding, C-terminal YP_RS10430 IPR019999 Anthranilate synthase component I - like YP_RS10435 IPR013205 Leader peptide, tryptophan-operon YP_RS10445 IPR003141 Polymerase/histidinol phosphatase, N-terminal YP_RS10445 IPR004013 PHP, C-terminal YP_RS10445 IPR016195 Polymerase/histidinol phosphatase-like YP_RS10450 IPR006070 YrdC-like domain YP_RS10450 IPR017945 DHBP synthase RibB-like alpha/beta domain YP_RS10455 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YP_RS10455 IPR002942 RNA-binding S4 domain YP_RS10455 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YP_RS10455 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YP_RS10455 IPR020103 Pseudouridine synthase, catalytic domain YP_RS10460 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YP_RS10460 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain YP_RS10460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10465 IPR002347 Glucose/ribitol dehydrogenase YP_RS10465 IPR016040 NAD(P)-binding domain YP_RS10465 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS10470 IPR002142 Peptidase S49 YP_RS10470 IPR013703 Peptidase S49, N-terminal proteobacteria YP_RS10470 IPR029045 ClpP/crotonase-like domain YP_RS10475 IPR019633 Protein of unknown function DUF2498 YP_RS10485 IPR000380 DNA topoisomerase, type IA YP_RS10485 IPR003601 DNA topoisomerase, type IA, domain 2 YP_RS10485 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YP_RS10485 IPR005733 DNA topoisomerase I, bacterial-type YP_RS10485 IPR006171 Toprim domain YP_RS10485 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YP_RS10485 IPR013497 DNA topoisomerase, type IA, central YP_RS10485 IPR013498 DNA topoisomerase, type IA, zn finger YP_RS10485 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YP_RS10485 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YP_RS10485 IPR023405 DNA topoisomerase, type IA, core domain YP_RS10485 IPR023406 DNA topoisomerase, type IA, active site YP_RS10485 IPR028612 DNA topoisomerase I, type IA YP_RS10490 IPR000847 Transcription regulator HTH, LysR YP_RS10490 IPR005119 LysR, substrate-binding YP_RS10490 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10500 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_RS10500 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_RS10500 IPR006249 Aconitate/iron regulatory protein 2 YP_RS10500 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YP_RS10500 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YP_RS10500 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YP_RS10500 IPR015937 Aconitase/isopropylmalate dehydratase YP_RS10500 IPR018136 Aconitase family, 4Fe-4S cluster binding site YP_RS10505 IPR000926 GTP cyclohydrolase II, RibA YP_RS10505 IPR032677 YP_RS10505 YP_RS10510 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YP_RS10515 IPR010445 Protein of unknown function DUF1049 YP_RS10515 IPR032906 YP_RS10515 YP_RS10520 IPR011990 Tetratricopeptide-like helical domain YP_RS10520 IPR019734 Tetratricopeptide repeat YP_RS10520 IPR030865 YP_RS10520 YP_RS10525 IPR010985 Ribbon-helix-helix YP_RS10525 IPR013321 Arc-type ribbon-helix-helix YP_RS10530 IPR001754 Orotidine 5'-phosphate decarboxylase domain YP_RS10530 IPR011060 Ribulose-phosphate binding barrel YP_RS10530 IPR013785 Aldolase-type TIM barrel YP_RS10530 IPR014732 Orotidine 5'-phosphate decarboxylase YP_RS10530 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YP_RS10535 IPR001950 Translation initiation factor SUI1 YP_RS10535 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YP_RS10540 IPR008816 Glycine zipper 2TM domain YP_RS10545 IPR001303 Class II aldolase/adducin N-terminal YP_RS10545 IPR004661 L-ribulose-5-phosphate 4-epimerase YP_RS10550 IPR018680 Protein of unknown function DUF2164 YP_RS10555 IPR001585 Transaldolase YP_RS10555 IPR004731 Transaldolase 3A/3B YP_RS10555 IPR013785 Aldolase-type TIM barrel YP_RS10555 IPR018225 Transaldolase, active site YP_RS10560 IPR007423 Protein of unknown function DUF466 YP_RS10565 IPR003706 Carbon starvation protein CstA YP_RS10565 IPR025299 CstA C-terminal domain YP_RS10570 IPR003029 Ribosomal protein S1, RNA-binding domain YP_RS10570 IPR004476 Ribonuclease II/ribonuclease R YP_RS10570 IPR011129 Cold shock protein YP_RS10570 IPR011804 Ribonuclease II YP_RS10570 IPR012340 Nucleic acid-binding, OB-fold YP_RS10570 IPR013223 Ribonuclease B, N-terminal OB domain YP_RS10570 IPR022966 Ribonuclease II/R, conserved site YP_RS10575 IPR011701 Major facilitator superfamily YP_RS10575 IPR020846 Major facilitator superfamily domain YP_RS10580 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS10580 IPR016040 NAD(P)-binding domain YP_RS10585 IPR000445 Helix-hairpin-helix motif YP_RS10585 IPR003265 HhH-GPD domain YP_RS10585 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YP_RS10585 IPR004035 Endonuclease III, iron-sulphur binding site YP_RS10585 IPR004036 Endonuclease III-like, conserved site-2 YP_RS10585 IPR005759 Endonuclease III YP_RS10585 IPR011257 DNA glycosylase YP_RS10585 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YP_RS10590 IPR003667 Electron transport complex, Rnf/Nqr YP_RS10590 IPR010968 Electron transport complex, RnfE YP_RS10595 IPR007329 FMN-binding YP_RS10595 IPR010209 Electron transport complex, RnfG YP_RS10600 IPR004338 NADH-quinone reductase NQR2/RnfD YP_RS10600 IPR011303 Electron transport complex, RnfD YP_RS10605 IPR009057 Homeodomain-like YP_RS10605 IPR011256 Regulatory factor, effector binding domain YP_RS10605 IPR018060 DNA binding HTH domain, AraC-type YP_RS10605 IPR029442 GyrI-like small molecule binding domain YP_RS10610 IPR009051 Alpha-helical ferredoxin YP_RS10610 IPR010208 Electron transport complex protein RnfC YP_RS10610 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YP_RS10610 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS10610 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS10610 IPR019554 Soluble ligand binding domain YP_RS10610 IPR026902 RnfC Barrel sandwich hybrid domain YP_RS10615 IPR007202 4Fe-4S domain YP_RS10615 IPR010207 Electron transport complex, RnfB YP_RS10615 IPR016463 Electron transport complex, RnfB, Proteobacteria YP_RS10615 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS10620 IPR003667 Electron transport complex, Rnf/Nqr YP_RS10620 IPR011293 Electron transport complex, RnfA YP_RS10625 IPR019690 Protein of unknown function DUF2569 YP_RS10630 IPR003439 ABC transporter-like YP_RS10630 IPR011527 ABC transporter type 1, transmembrane domain YP_RS10630 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10635 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10645 IPR003997 RTX secretion protein D, Gram-negative bacteria YP_RS10645 IPR006143 RND efflux pump, membrane fusion protein YP_RS10645 IPR006144 Secretion protein HlyD, conserved site YP_RS10650 IPR003439 ABC transporter-like YP_RS10650 IPR003593 AAA+ ATPase domain YP_RS10650 IPR005074 Peptidase C39, bacteriocin processing YP_RS10650 IPR010132 ATPase, type I secretion system, HlyB YP_RS10650 IPR011527 ABC transporter type 1, transmembrane domain YP_RS10650 IPR017871 ABC transporter, conserved site YP_RS10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10655 IPR003762 L-arabinose isomerase YP_RS10655 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YP_RS10655 IPR009015 L-fucose isomerase, N-terminal/central domain YP_RS10655 IPR024664 L-arabinose isomerase, C-terminal YP_RS10660 IPR005929 L-ribulokinase YP_RS10660 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS10660 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS10665 IPR001761 Periplasmic binding protein/LacI sugar binding domain YP_RS10665 IPR026266 L-arabinose-binding periplasmic protein YP_RS10665 IPR028082 Periplasmic binding protein-like I YP_RS10670 IPR003439 ABC transporter-like YP_RS10670 IPR003593 AAA+ ATPase domain YP_RS10670 IPR017871 ABC transporter, conserved site YP_RS10670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10675 IPR001851 ABC transporter, permease YP_RS10685 IPR000683 Oxidoreductase, N-terminal YP_RS10685 IPR004104 Oxidoreductase, C-terminal YP_RS10685 IPR016040 NAD(P)-binding domain YP_RS10690 IPR016833 Putative sodium bile acid cotransporter YP_RS10700 IPR010352 Protein of unknown function DUF945 YP_RS10705 IPR001250 Mannose-6-phosphate isomerase, type I YP_RS10705 IPR011051 RmlC-like cupin domain YP_RS10705 IPR014710 RmlC-like jelly roll fold YP_RS10705 IPR016305 Mannose-6-phosphate isomerase YP_RS10705 IPR018050 Phosphomannose isomerase, type I, conserved site YP_RS10710 IPR000362 Fumarate lyase family YP_RS10710 IPR005677 Fumarate hydratase, class II YP_RS10710 IPR008948 L-Aspartase-like YP_RS10710 IPR018951 Fumarase C, C-terminal YP_RS10710 IPR020557 Fumarate lyase, conserved site YP_RS10710 IPR022761 Fumarate lyase, N-terminal YP_RS10710 IPR024083 Fumarase/histidase, N-terminal YP_RS10715 IPR008865 DNA replication terminus site-binding protein YP_RS10725 IPR000600 ROK YP_RS10725 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10730 IPR004472 Dethiobiotin synthase BioD YP_RS10730 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10735 IPR001807 Chloride channel, voltage gated YP_RS10735 IPR014743 Chloride channel, core YP_RS10735 IPR023790 Chloride channel, voltage-gated, ClcB YP_RS10745 IPR000843 Transcription regulator HTH, LacI YP_RS10745 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS10745 IPR028082 Periplasmic binding protein-like I YP_RS10755 IPR025997 Periplasmic binding protein domain YP_RS10755 IPR028082 Periplasmic binding protein-like I YP_RS10765 IPR000515 MetI-like domain YP_RS10770 IPR003439 ABC transporter-like YP_RS10770 IPR003593 AAA+ ATPase domain YP_RS10770 IPR017871 ABC transporter, conserved site YP_RS10770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10775 IPR000845 Nucleoside phosphorylase domain YP_RS10775 IPR011271 AMP nucleosidase YP_RS10775 IPR018017 Nucleoside phosphorylase YP_RS10775 IPR018953 AMP nucleoside phosphorylase, N-terminal YP_RS10785 IPR009216 Virulence factor SrfB YP_RS10790 IPR017030 Virulence effector, SrfC YP_RS10795 IPR010846 Protein of unknown function DUF1460 YP_RS10795 IPR023360 Putative xylanase-like C-terminal YP_RS10800 IPR000399 TPP-binding enzyme, conserved site YP_RS10800 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_RS10800 IPR012000 Thiamine pyrophosphate enzyme, central domain YP_RS10800 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YP_RS10800 IPR012846 Acetolactate synthase, large subunit, biosynthetic YP_RS10800 IPR029035 DHS-like NAD/FAD-binding domain YP_RS10800 IPR029061 Thiamin diphosphate-binding fold YP_RS10810 IPR006439 HAD hydrolase, subfamily IA YP_RS10810 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YP_RS10810 IPR023198 Phosphoglycolate phosphatase, domain 2 YP_RS10810 IPR023214 HAD-like domain YP_RS10815 IPR028932 TerB-C domain YP_RS10815 IPR029024 TerB-like YP_RS10820 IPR025266 TerB, N-terminal YP_RS10825 IPR001952 Alkaline phosphatase YP_RS10825 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS10825 IPR017850 Alkaline-phosphatase-like, core domain YP_RS10825 IPR018299 Alkaline phosphatase, active site YP_RS10830 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YP_RS10830 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YP_RS10830 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10830 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_RS10830 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YP_RS10835 IPR000595 Cyclic nucleotide-binding domain YP_RS10835 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10835 IPR012318 Helix-turn-helix motif, Crp-type YP_RS10835 IPR014710 RmlC-like jelly roll fold YP_RS10835 IPR018335 Transcription regulator HTH, Crp-type, conserved site YP_RS10835 IPR018490 Cyclic nucleotide-binding-like YP_RS10845 IPR012136 NADP transhydrogenase, beta subunit YP_RS10845 IPR029035 DHS-like NAD/FAD-binding domain YP_RS10850 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YP_RS10850 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YP_RS10850 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YP_RS10850 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YP_RS10850 IPR016040 NAD(P)-binding domain YP_RS10850 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YP_RS10850 IPR026255 NAD(P) transhydrogenase, alpha subunit YP_RS10860 IPR010854 Domain of unknown function DUF1471 YP_RS10860 IPR025539 YdgH protein YP_RS10860 IPR025543 Dodecin-like YP_RS10865 IPR002293 Amino acid/polyamine transporter I YP_RS10865 IPR004754 Amino acid antiporter YP_RS10875 IPR001789 Signal transduction response regulator, receiver domain YP_RS10875 IPR001867 Signal transduction response regulator, C-terminal YP_RS10875 IPR011006 CheY-like superfamily YP_RS10875 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS10875 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS10880 IPR003660 HAMP linker domain YP_RS10880 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS10885 IPR001584 Integrase, catalytic core YP_RS10885 IPR006120 Resolvase, HTH domain YP_RS10885 IPR009057 Homeodomain-like YP_RS10885 IPR012337 Ribonuclease H-like domain YP_RS10890 IPR001270 ClpA/B family YP_RS10890 IPR002611 IstB-like ATP-binding protein YP_RS10890 IPR003593 AAA+ ATPase domain YP_RS10890 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10890 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS10895 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS10895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS10900 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase YP_RS10905 IPR002686 Transposase IS200-like YP_RS10915 IPR005165 Anthrax toxin, edema factor, central YP_RS10915 IPR022385 Rhs repeat-associated core YP_RS10930 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YP_RS10930 IPR023480 Uncharacterised protein family UPF0312/YceI YP_RS10935 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YP_RS10935 IPR016174 Di-haem cytochrome, transmembrane YP_RS10950 IPR001254 Peptidase S1 YP_RS10950 IPR001314 Peptidase S1A, chymotrypsin-type YP_RS10950 IPR009003 Trypsin-like cysteine/serine peptidase domain YP_RS10950 IPR018114 Peptidase S1, trypsin family, active site YP_RS10950 IPR033116 YP_RS10950 YP_RS10955 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS10955 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS10960 IPR009241 Addiction module killer protein YP_RS10965 IPR001650 Helicase, C-terminal YP_RS10965 IPR003593 AAA+ ATPase domain YP_RS10965 IPR007502 Helicase-associated domain YP_RS10965 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type YP_RS10965 IPR011545 DEAD/DEAH box helicase domain YP_RS10965 IPR011709 Domain of unknown function DUF1605 YP_RS10965 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS10965 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal YP_RS10965 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS10970 IPR003680 Flavodoxin-like fold YP_RS10970 IPR023048 NADH-azoreductase, FMN-dependent YP_RS10970 IPR029039 Flavoprotein-like YP_RS10975 IPR007324 Sugar-binding domain, putative YP_RS10980 IPR000669 Mannitol dehydrogenase YP_RS10980 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS10980 IPR013118 Mannitol dehydrogenase, C-terminal YP_RS10980 IPR013131 Mannitol dehydrogenase, N-terminal YP_RS10980 IPR013328 Dehydrogenase, multihelical YP_RS10980 IPR016040 NAD(P)-binding domain YP_RS10985 IPR008309 Uncharacterised conserved protein UCP025560 YP_RS10990 IPR025985 YnbE-like lipoprotein YP_RS10995 IPR021730 Dicarboxylate transport YP_RS11000 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_RS11000 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YP_RS11000 IPR016040 NAD(P)-binding domain YP_RS11000 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YP_RS11000 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YP_RS11005 IPR005184 Domain of unknown function DUF306, Meta/HslJ YP_RS11010 IPR005590 Protein of unknown function DUF333 YP_RS11015 IPR003416 MgtC/SapB/SrpB transporter YP_RS11020 IPR000390 Small multidrug resistance protein family YP_RS11025 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YP_RS11025 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YP_RS11025 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YP_RS11025 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_RS11025 IPR011895 Pyruvate-flavodoxin oxidoreductase YP_RS11025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS11025 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS11025 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YP_RS11025 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YP_RS11025 IPR029061 Thiamin diphosphate-binding fold YP_RS11025 IPR033412 YP_RS11025 YP_RS11030 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YP_RS11030 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA YP_RS11030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS11035 IPR013094 Alpha/beta hydrolase fold-3 YP_RS11035 IPR029058 Alpha/Beta hydrolase fold YP_RS11040 IPR000551 MerR-type HTH domain YP_RS11040 IPR009061 DNA binding domain, putative YP_RS11040 IPR011256 Regulatory factor, effector binding domain YP_RS11045 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YP_RS11050 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS11050 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YP_RS11050 IPR030678 YP_RS11050 YP_RS11055 IPR000834 Peptidase M14, carboxypeptidase A YP_RS11060 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YP_RS11060 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YP_RS11060 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_RS11060 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YP_RS11060 IPR029017 Enolase N-terminal domain-like YP_RS11060 IPR029065 Enolase C-terminal domain-like YP_RS11065 IPR002065 Putative thiol peroxidase Tpx YP_RS11065 IPR012336 Thioredoxin-like fold YP_RS11065 IPR013740 Redoxin YP_RS11065 IPR018219 Thiol peroxidase conserved site YP_RS11070 IPR002686 Transposase IS200-like YP_RS11075 IPR000014 PAS domain YP_RS11075 IPR002078 RNA polymerase sigma factor 54 interaction domain YP_RS11075 IPR003593 AAA+ ATPase domain YP_RS11075 IPR009057 Homeodomain-like YP_RS11075 IPR013767 PAS fold YP_RS11075 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YP_RS11075 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YP_RS11075 IPR025944 Sigma-54 interaction domain, conserved site YP_RS11075 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11075 IPR030828 YP_RS11075 YP_RS11080 IPR011979 Conserved hypothetical protein CHP02293 YP_RS11080 IPR024467 Domain of unknown function DUF2384 YP_RS11085 IPR014914 RES YP_RS11090 IPR006507 Uncharacterised protein family UPF0283 YP_RS11090 IPR021147 Protein of unknown function DUF697 YP_RS11095 IPR007413 Protein of unknown function DUF463, YcjX-like protein YP_RS11100 IPR014321 Phage shock protein, PspD YP_RS11105 IPR007168 Phage shock protein, PspC, N-terminal YP_RS11105 IPR014320 Phage shock protein, PspC YP_RS11110 IPR009554 Phage shock protein, PspB YP_RS11115 IPR007157 PspA/IM30 YP_RS11115 IPR014319 Phage shock protein, PspA YP_RS11120 IPR002078 RNA polymerase sigma factor 54 interaction domain YP_RS11120 IPR002197 DNA binding HTH domain, Fis-type YP_RS11120 IPR003593 AAA+ ATPase domain YP_RS11120 IPR009057 Homeodomain-like YP_RS11120 IPR014317 Transcription activator PspF YP_RS11120 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YP_RS11120 IPR025944 Sigma-54 interaction domain, conserved site YP_RS11120 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11125 IPR002686 Transposase IS200-like YP_RS11140 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS11140 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YP_RS11140 IPR030678 YP_RS11140 YP_RS11145 IPR000515 MetI-like domain YP_RS11150 IPR000515 MetI-like domain YP_RS11150 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YP_RS11155 IPR003439 ABC transporter-like YP_RS11155 IPR003593 AAA+ ATPase domain YP_RS11155 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YP_RS11155 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11160 IPR003439 ABC transporter-like YP_RS11160 IPR003593 AAA+ ATPase domain YP_RS11160 IPR017871 ABC transporter, conserved site YP_RS11160 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11165 IPR029032 AhpD-like YP_RS11170 IPR000109 Proton-dependent oligopeptide transporter family YP_RS11170 IPR005279 Amino acid/peptide transporter family YP_RS11170 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YP_RS11170 IPR020846 Major facilitator superfamily domain YP_RS11170 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YP_RS11175 IPR009698 Protein of unknown function DUF1282 YP_RS11180 IPR020317 Uncharacterised protein family YjbD YP_RS11185 IPR004045 Glutathione S-transferase, N-terminal YP_RS11185 IPR004046 Glutathione S-transferase, C-terminal YP_RS11185 IPR010987 Glutathione S-transferase, C-terminal-like YP_RS11185 IPR012336 Thioredoxin-like fold YP_RS11190 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase YP_RS11190 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YP_RS11190 IPR023685 Pyridoxal kinase PdxY YP_RS11190 IPR029056 Ribokinase-like YP_RS11195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS11195 IPR002305 Aminoacyl-tRNA synthetase, class Ic YP_RS11195 IPR002307 Tyrosine-tRNA ligase YP_RS11195 IPR002942 RNA-binding S4 domain YP_RS11195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS11195 IPR024088 Tyrosine-tRNA ligase, bacterial-type YP_RS11195 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YP_RS11200 IPR000659 Pyridoxamine 5'-phosphate oxidase YP_RS11200 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_RS11200 IPR012349 FMN-binding split barrel YP_RS11200 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YP_RS11200 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YP_RS11205 IPR018660 C-type lysozyme, inhibitor YP_RS11210 IPR005338 Anhydro-N-acetylmuramic acid kinase YP_RS11215 IPR008816 Glycine zipper 2TM domain YP_RS11220 IPR000835 MarR-type HTH domain YP_RS11220 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS11220 IPR023071 Transcriptional regulator, SlyA YP_RS11220 IPR023187 Transcriptional regulator MarR-type, conserved site YP_RS11225 IPR001395 Aldo/keto reductase YP_RS11225 IPR020471 Aldo/keto reductase subgroup YP_RS11225 IPR023210 NADP-dependent oxidoreductase domain YP_RS11230 IPR010710 Protein of unknown function DUF1289 YP_RS11235 IPR000917 Sulfatase YP_RS11235 IPR012549 Domain of unknown function DUF1705 YP_RS11235 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS11235 IPR017850 Alkaline-phosphatase-like, core domain YP_RS11240 IPR001647 DNA-binding HTH domain, TetR-type YP_RS11240 IPR009057 Homeodomain-like YP_RS11240 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YP_RS11240 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS11245 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_RS11245 IPR013785 Aldolase-type TIM barrel YP_RS11250 IPR022385 Rhs repeat-associated core YP_RS11255 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YP_RS11255 IPR004361 Glyoxalase I YP_RS11255 IPR018146 Glyoxalase I, conserved site YP_RS11255 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YP_RS11260 IPR005987 Ribonuclease T YP_RS11260 IPR012337 Ribonuclease H-like domain YP_RS11260 IPR013520 Exonuclease, RNase T/DNA polymerase III YP_RS11265 IPR002109 Glutaredoxin YP_RS11265 IPR004480 Monothiol glutaredoxin-related YP_RS11265 IPR012336 Thioredoxin-like fold YP_RS11265 IPR014434 Monothiol glutaredoxin YP_RS11275 IPR000064 Endopeptidase, NLPC/P60 domain YP_RS11280 IPR001189 Manganese/iron superoxide dismutase YP_RS11280 IPR019831 Manganese/iron superoxide dismutase, N-terminal YP_RS11280 IPR019832 Manganese/iron superoxide dismutase, C-terminal YP_RS11280 IPR019833 Manganese/iron superoxide dismutase, binding site YP_RS11285 IPR000843 Transcription regulator HTH, LacI YP_RS11285 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS11285 IPR023588 Transcription regulator HTH, PurR YP_RS11285 IPR028082 Periplasmic binding protein-like I YP_RS11290 IPR000847 Transcription regulator HTH, LysR YP_RS11290 IPR005119 LysR, substrate-binding YP_RS11290 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS11295 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YP_RS11295 IPR011701 Major facilitator superfamily YP_RS11295 IPR020846 Major facilitator superfamily domain YP_RS11300 IPR003333 Mycolic acid cyclopropane synthase YP_RS11300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS11305 IPR001783 Lumazine-binding protein YP_RS11305 IPR017938 Riboflavin synthase-like beta-barrel YP_RS11305 IPR023366 ATP synthase subunit alpha-like domain YP_RS11305 IPR026017 Lumazine-binding domain YP_RS11310 IPR002528 Multi antimicrobial extrusion protein YP_RS11310 IPR022913 Multidrug resistance protein MdtK YP_RS11325 IPR001697 Pyruvate kinase YP_RS11325 IPR011037 Pyruvate kinase-like, insert domain YP_RS11325 IPR015793 Pyruvate kinase, barrel YP_RS11325 IPR015794 Pyruvate kinase, alpha/beta YP_RS11325 IPR015795 Pyruvate kinase, C-terminal YP_RS11325 IPR015806 Pyruvate kinase, beta-barrel insert domain YP_RS11325 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS11325 IPR018209 Pyruvate kinase, active site YP_RS11330 IPR006817 Lipoprotein leucine-zipper YP_RS11330 IPR016367 Murein-lipoprotein YP_RS11340 IPR002686 Transposase IS200-like YP_RS11345 IPR001584 Integrase, catalytic core YP_RS11345 IPR006120 Resolvase, HTH domain YP_RS11345 IPR009057 Homeodomain-like YP_RS11345 IPR012337 Ribonuclease H-like domain YP_RS11350 IPR001270 ClpA/B family YP_RS11350 IPR002611 IstB-like ATP-binding protein YP_RS11350 IPR003593 AAA+ ATPase domain YP_RS11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11350 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS11355 IPR005490 L,D-transpeptidase catalytic domain YP_RS11360 IPR003808 Fe-S metabolism associated domain, SufE-like YP_RS11360 IPR023939 Cysteine desulfuration protein SufE YP_RS11365 IPR000192 Aminotransferase class V domain YP_RS11365 IPR010970 Cysteine desulfurase, SufS YP_RS11365 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS11365 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS11365 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS11365 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YP_RS11370 IPR000825 SUF system FeS cluster assembly, SufBD YP_RS11370 IPR011542 SUF system FeS cluster assembly, SufD YP_RS11375 IPR003439 ABC transporter-like YP_RS11375 IPR003593 AAA+ ATPase domain YP_RS11375 IPR010230 FeS cluster assembly SUF system, ATPase SufC YP_RS11375 IPR017871 ABC transporter, conserved site YP_RS11375 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11380 IPR000825 SUF system FeS cluster assembly, SufBD YP_RS11380 IPR010231 SUF system FeS cluster assembly, SufB YP_RS11385 IPR000361 FeS cluster biogenesis YP_RS11385 IPR016092 FeS cluster insertion protein YP_RS11385 IPR017870 FeS cluster insertion, C-terminal, conserved site YP_RS11395 IPR003736 Phenylacetic acid degradation-related domain YP_RS11395 IPR006683 Thioesterase superfamily YP_RS11395 IPR029069 HotDog domain YP_RS11395 IPR030863 YP_RS11395 YP_RS11400 IPR004113 FAD-linked oxidase, C-terminal YP_RS11400 IPR006094 FAD linked oxidase, N-terminal YP_RS11400 IPR009051 Alpha-helical ferredoxin YP_RS11400 IPR016164 FAD-linked oxidase-like, C-terminal YP_RS11400 IPR016166 FAD-binding, type 2 YP_RS11400 IPR016167 FAD-binding, type 2, subdomain 1 YP_RS11400 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS11400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS11400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS11405 IPR002549 Uncharacterised protein family UPF0118 YP_RS11410 IPR000121 PEP-utilising enzyme, C-terminal YP_RS11410 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YP_RS11410 IPR006319 Phosphoenolpyruvate synthase YP_RS11410 IPR008279 PEP-utilising enzyme, mobile domain YP_RS11410 IPR013815 ATP-grasp fold, subdomain 1 YP_RS11410 IPR013816 ATP-grasp fold, subdomain 2 YP_RS11410 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS11410 IPR018274 PEP-utilising enzyme, active site YP_RS11410 IPR023151 PEP-utilising enzyme, conserved site YP_RS11415 IPR005177 Bifunctional kinase-pyrophosphorylase YP_RS11415 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain YP_RS11415 IPR026530 Phosphoenolpyruvate synthase regulatory protein YP_RS11420 IPR006218 DAHP synthetase I/KDSA YP_RS11420 IPR006219 DHAP synthase, class 1 YP_RS11420 IPR013785 Aldolase-type TIM barrel YP_RS11430 IPR004143 Biotin/lipoate A/B protein ligase YP_RS11430 IPR004562 Lipoyltransferase/lipoate-protein ligase YP_RS11430 IPR019491 Lipoate protein ligase, C-terminal YP_RS11430 IPR023741 Lipoate-protein ligase A YP_RS11435 IPR000064 Endopeptidase, NLPC/P60 domain YP_RS11440 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YP_RS11445 IPR000620 Drug/metabolite transporter YP_RS11445 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YP_RS11450 IPR003342 Glycosyl transferase, family 39 YP_RS11450 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YP_RS11455 IPR002509 Polysaccharide deacetylase YP_RS11455 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YP_RS11455 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YP_RS11460 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS11460 IPR002376 Formyl transferase, N-terminal YP_RS11460 IPR005793 Formyl transferase, C-terminal YP_RS11460 IPR011034 Formyl transferase, C-terminal-like YP_RS11460 IPR016040 NAD(P)-binding domain YP_RS11460 IPR021168 Bifunctional polymyxin resistance protein, ArnA YP_RS11465 IPR001173 Glycosyltransferase 2-like YP_RS11465 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_RS11465 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS11470 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YP_RS11470 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS11470 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS11470 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS11470 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YP_RS11475 IPR003439 ABC transporter-like YP_RS11475 IPR003593 AAA+ ATPase domain YP_RS11475 IPR017871 ABC transporter, conserved site YP_RS11475 IPR023693 ABC transporter, vitamin B12, BtuD YP_RS11475 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11480 IPR000889 Glutathione peroxidase YP_RS11480 IPR012336 Thioredoxin-like fold YP_RS11480 IPR029759 Glutathione peroxidase active site YP_RS11485 IPR000522 ABC transporter, permease protein YP_RS11485 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YP_RS11485 IPR029022 ABC transporter, BtuC-like YP_RS11490 IPR019638 Protein of unknown function DUF2502 YP_RS11495 IPR000119 Histone-like bacterial DNA-binding protein YP_RS11495 IPR005684 Integration host factor, alpha subunit YP_RS11495 IPR010992 Integration host factor (IHF)-like DNA-binding domain YP_RS11495 IPR020816 Histone-like DNA-binding protein, conserved site YP_RS11500 IPR002547 tRNA-binding domain YP_RS11500 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YP_RS11500 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding YP_RS11500 IPR005146 B3/B4 tRNA-binding domain YP_RS11500 IPR005147 tRNA synthetase, B5-domain YP_RS11500 IPR009061 DNA binding domain, putative YP_RS11500 IPR012340 Nucleic acid-binding, OB-fold YP_RS11500 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YP_RS11505 IPR002319 Phenylalanyl-tRNA synthetase YP_RS11505 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YP_RS11505 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YP_RS11505 IPR010978 tRNA-binding arm YP_RS11505 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YP_RS11510 IPR005813 Ribosomal protein L20 YP_RS11515 IPR001706 Ribosomal protein L35, non-mitochondrial YP_RS11515 IPR018265 Ribosomal protein L35, conserved site YP_RS11515 IPR021137 Ribosomal protein L35 YP_RS11520 IPR001288 Translation initiation factor 3 YP_RS11520 IPR019815 Translation initiation factor 3, C-terminal YP_RS11525 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YP_RS11525 IPR002320 Threonine-tRNA ligase, class IIa YP_RS11525 IPR004095 TGS YP_RS11525 IPR004154 Anticodon-binding YP_RS11525 IPR012675 Beta-grasp domain YP_RS11525 IPR012676 TGS-like YP_RS11525 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YP_RS11525 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YP_RS11530 IPR025309 KTSC domain YP_RS11545 IPR002771 Multiple antibiotic resistance (MarC)-related YP_RS11550 IPR000189 Prokaryotic transglycosylase, active site YP_RS11550 IPR008258 Lytic transglycosylase-like SLT domain YP_RS11550 IPR023346 Lysozyme-like domain YP_RS11555 IPR006127 Periplasmic solute binding protein family YP_RS11555 IPR006128 Adhesion lipoprotein YP_RS11555 IPR006129 Adhesin B YP_RS11560 IPR003439 ABC transporter-like YP_RS11560 IPR003593 AAA+ ATPase domain YP_RS11560 IPR017871 ABC transporter, conserved site YP_RS11560 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11565 IPR001626 ABC-3 YP_RS11565 IPR029022 ABC transporter, BtuC-like YP_RS11570 IPR001626 ABC-3 YP_RS11570 IPR029022 ABC transporter, BtuC-like YP_RS11580 IPR011009 Protein kinase-like domain YP_RS11580 IPR016477 Fructosamine/Ketosamine-3-kinase YP_RS11585 IPR025229 YniB-like protein YP_RS11590 IPR006439 HAD hydrolase, subfamily IA YP_RS11590 IPR023198 Phosphoglycolate phosphatase, domain 2 YP_RS11590 IPR023214 HAD-like domain YP_RS11595 IPR001207 Transposase, mutator type YP_RS11610 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS11615 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YP_RS11615 IPR022987 Uncharacterised protein family UPF0227 YP_RS11615 IPR029058 Alpha/Beta hydrolase fold YP_RS11620 IPR001764 Glycoside hydrolase, family 3, N-terminal YP_RS11620 IPR017853 Glycoside hydrolase, superfamily YP_RS11620 IPR019800 Glycoside hydrolase, family 3, active site YP_RS11620 IPR022956 Beta-hexosaminidase, bacterial YP_RS11625 IPR002575 Aminoglycoside phosphotransferase YP_RS11625 IPR011009 Protein kinase-like domain YP_RS11625 IPR014093 Thiamine kinase YP_RS11630 IPR014094 Penicillin-binding protein activator LpoB YP_RS11635 IPR010824 Protein of unknown function DUF1425 YP_RS11640 IPR001310 Histidine triad (HIT) protein YP_RS11640 IPR011146 HIT-like domain YP_RS11640 IPR019808 Histidine triad, conserved site YP_RS11645 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YP_RS11645 IPR016040 NAD(P)-binding domain YP_RS11650 IPR002686 Transposase IS200-like YP_RS11655 IPR001996 Phosphotransferase system, IIB component, type 1 YP_RS11655 IPR003352 Phosphotransferase system, EIIC YP_RS11655 IPR011299 PTS system glucose-specific IIBC component YP_RS11655 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YP_RS11660 IPR001130 TatD family YP_RS11660 IPR015991 Uncharacterised deoxyribonuclease TatD-type YP_RS11660 IPR018228 Deoxyribonuclease, TatD-related, conserved site YP_RS11660 IPR032466 YP_RS11660 YP_RS11665 IPR004622 DNA polymerase III, delta prime subunit YP_RS11665 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YP_RS11665 IPR015199 DNA polymerase III, delta subunit, C-terminal YP_RS11665 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11670 IPR018094 Thymidylate kinase YP_RS11670 IPR018095 Thymidylate kinase, conserved site YP_RS11670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11675 IPR003770 Uncharacterised protein family UPF0755, YceG-like YP_RS11675 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain YP_RS11680 IPR001544 Aminotransferase, class IV YP_RS11680 IPR017824 Aminodeoxychorismate lyase, class IV YP_RS11680 IPR018300 Aminotransferase, class IV, conserved site YP_RS11685 IPR002686 Transposase IS200-like YP_RS11690 IPR014030 Beta-ketoacyl synthase, N-terminal YP_RS11690 IPR014031 Beta-ketoacyl synthase, C-terminal YP_RS11690 IPR016039 Thiolase-like YP_RS11690 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YP_RS11690 IPR018201 Beta-ketoacyl synthase, active site YP_RS11690 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YP_RS11695 IPR003231 Acyl carrier protein (ACP) YP_RS11695 IPR006162 Phosphopantetheine attachment site YP_RS11695 IPR009081 Acyl carrier protein-like YP_RS11700 IPR002347 Glucose/ribitol dehydrogenase YP_RS11700 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YP_RS11700 IPR016040 NAD(P)-binding domain YP_RS11700 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS11705 IPR001227 Acyl transferase domain YP_RS11705 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YP_RS11705 IPR014043 Acyl transferase YP_RS11705 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YP_RS11705 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YP_RS11705 IPR020801 Polyketide synthase, acyl transferase domain YP_RS11705 IPR024925 Malonyl CoA-acyl carrier protein transacylase YP_RS11710 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YP_RS11710 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YP_RS11710 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_RS11710 IPR016039 Thiolase-like YP_RS11715 IPR003664 Fatty acid synthesis PlsX protein YP_RS11715 IPR012281 Phospholipid biosynthesis protein, PlsX-like YP_RS11715 IPR024084 Isopropylmalate dehydrogenase-like domain YP_RS11720 IPR002677 Ribosomal protein L32p YP_RS11720 IPR011332 Zinc-binding ribosomal protein YP_RS11725 IPR003772 Protein of unknown function DUF177 YP_RS11730 IPR003697 Maf-like protein YP_RS11730 IPR029001 Inosine triphosphate pyrophosphatase-like YP_RS11735 IPR002942 RNA-binding S4 domain YP_RS11735 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YP_RS11735 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YP_RS11735 IPR006225 Pseudouridine synthase, RluC/RluD YP_RS11735 IPR020103 Pseudouridine synthase, catalytic domain YP_RS11740 IPR003029 Ribosomal protein S1, RNA-binding domain YP_RS11740 IPR004659 Ribonuclease E/G YP_RS11740 IPR012340 Nucleic acid-binding, OB-fold YP_RS11740 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YP_RS11740 IPR021968 Polyribonucleotide phosphorylase C-terminal YP_RS11740 IPR022967 RNA-binding domain, S1 YP_RS11740 IPR028878 Ribonuclease E YP_RS11745 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YP_RS11745 IPR011008 Dimeric alpha-beta barrel YP_RS11750 IPR002195 Dihydroorotase, conserved site YP_RS11750 IPR004721 Dihydroorotase homodimeric type YP_RS11750 IPR006680 Amidohydrolase 1 YP_RS11750 IPR032466 YP_RS11750 YP_RS11755 IPR010391 DNA damage-inducible protein DinI-like YP_RS11765 IPR025730 Biofilm regulator BssS YP_RS11770 IPR001207 Transposase, mutator type YP_RS11775 IPR006076 FAD dependent oxidoreductase YP_RS11775 IPR023493 N-methyl-L-tryptophan oxidase MTOX YP_RS11775 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS11780 IPR000792 Transcription regulator LuxR, C-terminal YP_RS11780 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS11780 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS11785 IPR002549 Uncharacterised protein family UPF0118 YP_RS11790 IPR001763 Rhodanese-like domain YP_RS11790 IPR020936 Uncharacterised protein family UPF0176 YP_RS11790 IPR022111 Protein of unknown function DUF3650 YP_RS11810 IPR000620 Drug/metabolite transporter YP_RS11815 IPR001690 Autoinducer synthesis protein YP_RS11815 IPR016181 Acyl-CoA N-acyltransferase YP_RS11815 IPR018311 Autoinducer synthesis, conserved site YP_RS11820 IPR000792 Transcription regulator LuxR, C-terminal YP_RS11820 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YP_RS11820 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS11820 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS11825 IPR000847 Transcription regulator HTH, LysR YP_RS11825 IPR005119 LysR, substrate-binding YP_RS11825 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS11835 IPR005828 General substrate transporter YP_RS11835 IPR005829 Sugar transporter, conserved site YP_RS11835 IPR020846 Major facilitator superfamily domain YP_RS11840 IPR014826 Formaldehyde-activating enzyme YP_RS11840 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS11845 IPR001395 Aldo/keto reductase YP_RS11845 IPR023210 NADP-dependent oxidoreductase domain YP_RS11850 IPR013396 CRISPR-associated protein Csy4 YP_RS11855 IPR013399 CRISPR-associated protein Csy3 YP_RS11860 IPR013398 CRISPR-associated protein Csy2 YP_RS11865 IPR013397 CRISPR-associated protein Csy1 YP_RS11870 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YP_RS11870 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11875 IPR002729 CRISPR-associated protein Cas1 YP_RS11875 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YP_RS11885 IPR006685 Mechanosensitive ion channel MscS YP_RS11885 IPR010920 Like-Sm (LSM) domain YP_RS11885 IPR030192 YP_RS11885 YP_RS11895 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS11900 IPR015045 Protein of unknown function DUF1861 YP_RS11900 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YP_RS11905 IPR007184 Mannoside phosphorylase YP_RS11905 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YP_RS11910 IPR000515 MetI-like domain YP_RS11915 IPR000515 MetI-like domain YP_RS11925 IPR000843 Transcription regulator HTH, LacI YP_RS11925 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS11925 IPR028082 Periplasmic binding protein-like I YP_RS11930 IPR005841 Alpha-D-phosphohexomutase superfamily YP_RS11930 IPR005843 Alpha-D-phosphohexomutase, C-terminal YP_RS11930 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YP_RS11930 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YP_RS11930 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YP_RS11930 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YP_RS11930 IPR016066 Alpha-D-phosphohexomutase, conserved site YP_RS11935 IPR003439 ABC transporter-like YP_RS11935 IPR003593 AAA+ ATPase domain YP_RS11935 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS11935 IPR012340 Nucleic acid-binding, OB-fold YP_RS11935 IPR013611 Transport-associated OB, type 2 YP_RS11935 IPR017871 ABC transporter, conserved site YP_RS11935 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS11950 IPR025459 Protein of unknown function DUF4279 YP_RS11965 IPR006914 VENN motif-containing domain YP_RS11965 IPR008619 Filamentous haemagglutinin repeat YP_RS11965 IPR008638 Filamentous haemagglutinin, N-terminal YP_RS11965 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YP_RS11965 IPR011050 Pectin lyase fold/virulence factor YP_RS11965 IPR012334 Pectin lyase fold YP_RS11965 IPR024973 ESPR domain YP_RS11965 IPR025157 Haemagluttinin repeat YP_RS11970 IPR005565 Haemolysin activator HlyB YP_RS11970 IPR013686 Polypeptide-transport-associated, ShlB-type YP_RS11970 IPR027282 Two partner secretion pathway transporter YP_RS11975 IPR000951 Phthalate dioxygenase reductase YP_RS11975 IPR001041 2Fe-2S ferredoxin-type domain YP_RS11975 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS11975 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YP_RS11975 IPR008333 Oxidoreductase, FAD-binding domain YP_RS11975 IPR012675 Beta-grasp domain YP_RS11975 IPR017938 Riboflavin synthase-like beta-barrel YP_RS11980 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YP_RS11980 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YP_RS11980 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YP_RS11980 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YP_RS11985 IPR000060 BCCT transporter family YP_RS11985 IPR018093 BCCT transporter, conserved site YP_RS11995 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YP_RS11995 IPR011829 Tartrate dehydrogenase YP_RS11995 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YP_RS11995 IPR024084 Isopropylmalate dehydrogenase-like domain YP_RS12000 IPR000847 Transcription regulator HTH, LysR YP_RS12000 IPR005119 LysR, substrate-binding YP_RS12000 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS12005 IPR000843 Transcription regulator HTH, LacI YP_RS12005 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS12005 IPR025997 Periplasmic binding protein domain YP_RS12005 IPR028082 Periplasmic binding protein-like I YP_RS12010 IPR001851 ABC transporter, permease YP_RS12015 IPR003439 ABC transporter-like YP_RS12015 IPR003593 AAA+ ATPase domain YP_RS12015 IPR017871 ABC transporter, conserved site YP_RS12015 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12020 IPR025997 Periplasmic binding protein domain YP_RS12020 IPR028082 Periplasmic binding protein-like I YP_RS12025 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YP_RS12025 IPR011032 GroES (chaperonin 10)-like YP_RS12025 IPR013149 Alcohol dehydrogenase, C-terminal YP_RS12025 IPR013154 Alcohol dehydrogenase GroES-like YP_RS12025 IPR016040 NAD(P)-binding domain YP_RS12025 IPR020843 Polyketide synthase, enoylreductase YP_RS12030 IPR031829 YP_RS12030 YP_RS12035 IPR031829 YP_RS12035 YP_RS12040 IPR002524 Cation efflux protein YP_RS12040 IPR027469 Cation efflux protein transmembrane domain YP_RS12045 IPR000758 Virulence-related outer membrane protein YP_RS12045 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS12045 IPR027385 Outer membrane protein beta-barrel YP_RS12050 IPR000620 Drug/metabolite transporter YP_RS12055 IPR000182 GNAT domain YP_RS12055 IPR016181 Acyl-CoA N-acyltransferase YP_RS12060 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YP_RS12060 IPR023506 Trans-aconitate 2-methyltransferase YP_RS12060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS12065 IPR002177 DNA-binding protein Dps YP_RS12065 IPR008331 Ferritin/DPS protein domain YP_RS12065 IPR009078 Ferritin-like superfamily YP_RS12065 IPR012347 Ferritin-related YP_RS12065 IPR023067 DNA protection during starvation protein, gammaproteobacteria YP_RS12065 IPR023188 DNA-binding protein Dps, conserved site YP_RS12070 IPR003848 Domain of unknown function DUF218 YP_RS12070 IPR011990 Tetratricopeptide-like helical domain YP_RS12070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS12075 IPR001320 Ionotropic glutamate receptor YP_RS12075 IPR001638 Extracellular solute-binding protein, family 3 YP_RS12075 IPR018313 Extracellular solute-binding protein, family 3, conserved site YP_RS12080 IPR000515 MetI-like domain YP_RS12080 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS12085 IPR003439 ABC transporter-like YP_RS12085 IPR003593 AAA+ ATPase domain YP_RS12085 IPR017871 ABC transporter, conserved site YP_RS12085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12085 IPR030679 YP_RS12085 YP_RS12090 IPR000014 PAS domain YP_RS12090 IPR001610 PAC motif YP_RS12090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YP_RS12090 IPR004090 Chemotaxis methyl-accepting receptor YP_RS12090 IPR013656 PAS fold-4 YP_RS12095 IPR010286 Ribosomal RNA large subunit methyltransferase F-like YP_RS12095 IPR016909 Ribosomal RNA large subunit methyltransferase F YP_RS12095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS12100 IPR010854 Domain of unknown function DUF1471 YP_RS12100 IPR025543 Dodecin-like YP_RS12105 IPR000312 Glycosyl transferase, family 3 YP_RS12105 IPR017459 Glycosyl transferase family 3, N-terminal domain YP_RS12110 IPR000873 AMP-dependent synthetase/ligase YP_RS12110 IPR010192 2-succinylbenzoate--CoA ligase YP_RS12110 IPR020845 AMP-binding, conserved site YP_RS12115 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YP_RS12115 IPR010196 O-succinylbenzoic acid (OSB) synthetase YP_RS12115 IPR010197 O-succinylbenzoate synthase, low GC Gram-positive bacteria-type YP_RS12115 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_RS12115 IPR029017 Enolase N-terminal domain-like YP_RS12115 IPR029065 Enolase C-terminal domain-like YP_RS12120 IPR001753 Crotonase superfamily YP_RS12120 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase YP_RS12120 IPR014748 Crontonase, C-terminal YP_RS12120 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YP_RS12120 IPR029045 ClpP/crotonase-like domain YP_RS12125 IPR000073 Alpha/beta hydrolase fold-1 YP_RS12125 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_RS12125 IPR029058 Alpha/Beta hydrolase fold YP_RS12130 IPR004433 Menaquinone biosynthesis protein MenD YP_RS12130 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_RS12130 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YP_RS12130 IPR029061 Thiamin diphosphate-binding fold YP_RS12130 IPR032264 YP_RS12130 YP_RS12135 IPR004561 Isochorismate synthase YP_RS12135 IPR005801 ADC synthase YP_RS12135 IPR015890 Chorismate binding, C-terminal YP_RS12145 IPR010279 Protein of unknown function DUF883, ElaB YP_RS12160 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YP_RS12160 IPR004786 6-phosphogluconate dehydratase YP_RS12160 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YP_RS12160 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YP_RS12170 IPR011701 Major facilitator superfamily YP_RS12170 IPR020846 Major facilitator superfamily domain YP_RS12175 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_RS12175 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YP_RS12175 IPR016040 NAD(P)-binding domain YP_RS12185 IPR000843 Transcription regulator HTH, LacI YP_RS12185 IPR001761 Periplasmic binding protein/LacI sugar binding domain YP_RS12185 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS12185 IPR028082 Periplasmic binding protein-like I YP_RS12190 IPR003790 Protein of unknown function DUF187 YP_RS12190 IPR013781 Glycoside hydrolase, catalytic domain YP_RS12190 IPR017853 Glycoside hydrolase, superfamily YP_RS12195 IPR002347 Glucose/ribitol dehydrogenase YP_RS12195 IPR016040 NAD(P)-binding domain YP_RS12195 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS12200 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YP_RS12200 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12200 IPR031322 YP_RS12200 YP_RS12205 IPR004375 Conserved hypothetical protein CHP00022 YP_RS12215 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YP_RS12215 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YP_RS12220 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YP_RS12220 IPR003918 NADH:ubiquinone oxidoreductase YP_RS12220 IPR010227 NADH-quinone oxidoreductase, chain M/4 YP_RS12225 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal YP_RS12225 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YP_RS12225 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YP_RS12225 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YP_RS12230 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YP_RS12235 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YP_RS12240 IPR010226 NADH-quinone oxidoreductase, chain I YP_RS12240 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS12240 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS12245 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YP_RS12245 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YP_RS12250 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YP_RS12250 IPR001041 2Fe-2S ferredoxin-type domain YP_RS12250 IPR006656 Molybdopterin oxidoreductase YP_RS12250 IPR006657 Molydopterin dinucleotide-binding domain YP_RS12250 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YP_RS12250 IPR009010 Aspartate decarboxylase-like domain YP_RS12250 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YP_RS12250 IPR012675 Beta-grasp domain YP_RS12250 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YP_RS12255 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YP_RS12255 IPR011537 NADH ubiquinone oxidoreductase, F subunit YP_RS12255 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YP_RS12255 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_RS12260 IPR002023 NADH-quinone oxidoreductase subunit E-like YP_RS12260 IPR012336 Thioredoxin-like fold YP_RS12265 IPR001135 NADH-quinone oxidoreductase, subunit D YP_RS12265 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YP_RS12265 IPR010218 NADH dehydrogenase, subunit C YP_RS12265 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YP_RS12265 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YP_RS12265 IPR023062 NADH dehydrogenase, subunit CD YP_RS12265 IPR029014 NiFe hydrogenase-like YP_RS12270 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YP_RS12270 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YP_RS12275 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YP_RS12275 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YP_RS12280 IPR000847 Transcription regulator HTH, LysR YP_RS12280 IPR005119 LysR, substrate-binding YP_RS12280 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS12290 IPR004839 Aminotransferase, class I/classII YP_RS12290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS12290 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS12290 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS12295 IPR003607 HD/PDEase domain YP_RS12295 IPR006674 HD domain YP_RS12295 IPR022971 5'-deoxynucleotidase YfbR YP_RS12305 IPR004680 Citrate transporter-like domain YP_RS12305 IPR006037 Regulator of K+ conductance, C-terminal YP_RS12305 IPR031312 YP_RS12305 YP_RS12310 IPR006439 HAD hydrolase, subfamily IA YP_RS12310 IPR023198 Phosphoglycolate phosphatase, domain 2 YP_RS12310 IPR023214 HAD-like domain YP_RS12315 IPR005587 Uncharacterised protein family UPF0304, YfbU YP_RS12315 IPR023145 YfbU, helix-hairpin domain YP_RS12315 IPR023146 YfbU, alpha-helical bundle domain YP_RS12320 IPR007334 Uncharacterised protein family UPF0208 YP_RS12330 IPR000890 Aliphatic acid kinase, short-chain YP_RS12330 IPR004372 Acetate/Proprionate kinase YP_RS12330 IPR023865 Aliphatic acid kinase, short-chain, conserved site YP_RS12335 IPR002505 Phosphate acetyl/butaryl transferase YP_RS12335 IPR004614 Phosphate acetyltransferase YP_RS12335 IPR010766 DRTGG YP_RS12335 IPR016475 Phosphate acetyltransferase, bacteria YP_RS12335 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12335 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like YP_RS12340 IPR000843 Transcription regulator HTH, LacI YP_RS12340 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS12340 IPR028082 Periplasmic binding protein-like I YP_RS12345 IPR002178 PTS EIIA type-2 domain YP_RS12345 IPR016152 Phosphotransferase/anion transporter YP_RS12350 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YP_RS12355 IPR004703 Phosphotransferase system, sugar-specific permease component YP_RS12360 IPR000086 NUDIX hydrolase domain YP_RS12360 IPR015797 NUDIX hydrolase domain-like YP_RS12360 IPR024195 NUDIX hydrolase, YfcD, predicted YP_RS12365 IPR000979 Phosphodiesterase MJ0936/Vps29 YP_RS12365 IPR020935 Phosphodiesterase YfcE, conserved site YP_RS12365 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type YP_RS12365 IPR029052 Metallo-dependent phosphatase-like YP_RS12370 IPR001633 EAL domain YP_RS12375 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS12375 IPR010099 Sugar nucleotide epimerase YfcH,-like putative YP_RS12375 IPR013549 Domain of unknown function DUF1731 YP_RS12375 IPR016040 NAD(P)-binding domain YP_RS12380 IPR003439 ABC transporter-like YP_RS12380 IPR003593 AAA+ ATPase domain YP_RS12380 IPR017871 ABC transporter, conserved site YP_RS12380 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12380 IPR030679 YP_RS12380 YP_RS12385 IPR000515 MetI-like domain YP_RS12385 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS12390 IPR000515 MetI-like domain YP_RS12390 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS12390 IPR030199 YP_RS12390 YP_RS12395 IPR001638 Extracellular solute-binding protein, family 3 YP_RS12395 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YP_RS12395 IPR018313 Extracellular solute-binding protein, family 3, conserved site YP_RS12400 IPR003382 Flavoprotein YP_RS12400 IPR004507 Decarboxylase UbiX/Pad1 YP_RS12405 IPR000836 Phosphoribosyltransferase domain YP_RS12405 IPR005854 Amidophosphoribosyl transferase YP_RS12405 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS12405 IPR029057 Phosphoribosyltransferase-like YP_RS12410 IPR003825 Colicin V production, CvpA YP_RS12415 IPR007730 Sporulation-related domain YP_RS12415 IPR032898 YP_RS12415 YP_RS12420 IPR001645 Folylpolyglutamate synthetase YP_RS12420 IPR004101 Mur ligase, C-terminal YP_RS12420 IPR013221 Mur ligase, central YP_RS12420 IPR018109 Folylpolyglutamate synthetase, conserved site YP_RS12425 IPR000022 Carboxyl transferase YP_RS12425 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YP_RS12425 IPR029045 ClpP/crotonase-like domain YP_RS12430 IPR032816 YP_RS12430 YP_RS12430 IPR032818 YP_RS12430 YP_RS12435 IPR001406 Pseudouridine synthase I, TruA YP_RS12435 IPR020094 Pseudouridine synthase I, TruA, N-terminal YP_RS12435 IPR020095 Pseudouridine synthase I, TruA, C-terminal YP_RS12435 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YP_RS12435 IPR020103 Pseudouridine synthase, catalytic domain YP_RS12440 IPR000534 Semialdehyde dehydrogenase, NAD-binding YP_RS12440 IPR012080 Aspartate-semialdehyde dehydrogenase YP_RS12440 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YP_RS12440 IPR016040 NAD(P)-binding domain YP_RS12445 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_RS12445 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YP_RS12445 IPR016040 NAD(P)-binding domain YP_RS12445 IPR020921 Erythronate-4-phosphate dehydrogenase YP_RS12445 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YP_RS12445 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YP_RS12445 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YP_RS12450 IPR003313 AraC-type arabinose-binding/dimerisation domain YP_RS12450 IPR009057 Homeodomain-like YP_RS12450 IPR011051 RmlC-like cupin domain YP_RS12450 IPR014710 RmlC-like jelly roll fold YP_RS12450 IPR018060 DNA binding HTH domain, AraC-type YP_RS12450 IPR018062 HTH domain AraC-type, conserved site YP_RS12450 IPR020449 Transcription regulator HTH, AraC- type YP_RS12460 IPR000620 Drug/metabolite transporter YP_RS12465 IPR023597 Flagellar regulator Flk YP_RS12470 IPR000259 Fimbrial-type adhesion domain YP_RS12470 IPR008966 Adhesion domain YP_RS12475 IPR001920 Asp/Glu racemase YP_RS12475 IPR004380 Aspartate racemase YP_RS12475 IPR015942 Asp/Glu/hydantoin racemase YP_RS12475 IPR018187 Asp/Glu racemase, active site YP_RS12480 IPR014030 Beta-ketoacyl synthase, N-terminal YP_RS12480 IPR014031 Beta-ketoacyl synthase, C-terminal YP_RS12480 IPR016039 Thiolase-like YP_RS12480 IPR018201 Beta-ketoacyl synthase, active site YP_RS12480 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YP_RS12485 IPR006076 FAD dependent oxidoreductase YP_RS12485 IPR008471 MnmC-like methyltransferase YP_RS12485 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YP_RS12485 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YP_RS12485 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS12485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS12490 IPR014987 Uncharacterised protein family YfcL YP_RS12490 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS12495 IPR007411 Protein of unknown function DUF462 YP_RS12500 IPR002781 Transmembrane protein TauE like YP_RS12505 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YP_RS12505 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YP_RS12510 IPR000453 Chorismate synthase YP_RS12510 IPR020541 Chorismate synthase, conserved site YP_RS12515 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS12515 IPR004556 Modification methylase HemK YP_RS12515 IPR007848 Methyltransferase small domain YP_RS12515 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YP_RS12515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS12520 IPR002625 Smr protein/MutS2 C-terminal YP_RS12520 IPR022990 Uncharacterised protein family UPF0115 YP_RS12530 IPR004449 Phosphohistidine phosphatase SixA, subgroup YP_RS12530 IPR013078 Histidine phosphatase superfamily, clade-1 YP_RS12530 IPR029033 Histidine phosphatase superfamily YP_RS12535 IPR001753 Crotonase superfamily YP_RS12535 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_RS12535 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YP_RS12535 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YP_RS12535 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS12535 IPR012802 Fatty oxidation complex, alpha subunit FadJ YP_RS12535 IPR013328 Dehydrogenase, multihelical YP_RS12535 IPR016040 NAD(P)-binding domain YP_RS12535 IPR029045 ClpP/crotonase-like domain YP_RS12540 IPR002155 Thiolase YP_RS12540 IPR012806 Acetyl-CoA C-acyltransferase FadI YP_RS12540 IPR016039 Thiolase-like YP_RS12540 IPR020610 Thiolase, active site YP_RS12540 IPR020613 Thiolase, conserved site YP_RS12540 IPR020615 Thiolase, acyl-enzyme intermediate active site YP_RS12540 IPR020616 Thiolase, N-terminal YP_RS12540 IPR020617 Thiolase, C-terminal YP_RS12545 IPR005272 Conserved hypothetical protein CHP00743 YP_RS12550 IPR005017 Membrane protein, aromatic hydrocarbon degradation YP_RS12555 IPR007428 VacJ-like lipoprotein YP_RS12560 IPR011990 Tetratricopeptide-like helical domain YP_RS12560 IPR017560 Cytochrome c-type biogenesis protein CcmI YP_RS12565 IPR005616 Cytochrome C biogenesis protein CcmH YP_RS12570 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YP_RS12570 IPR012336 Thioredoxin-like fold YP_RS12570 IPR013740 Redoxin YP_RS12570 IPR017937 Thioredoxin, conserved site YP_RS12575 IPR002541 Cytochrome c assembly protein YP_RS12575 IPR003567 Cytochrome c-type biogenesis protein YP_RS12575 IPR003568 Cytochrome c-type biogenesis protein CcmF YP_RS12575 IPR032523 YP_RS12575 YP_RS12580 IPR004329 CcmE/CycJ protein YP_RS12580 IPR012340 Nucleic acid-binding, OB-fold YP_RS12585 IPR007078 Haem exporter protein D (CcmD) YP_RS12590 IPR002541 Cytochrome c assembly protein YP_RS12590 IPR003557 Cytochrome c-type biogenesis protein CcmC YP_RS12595 IPR003544 Cytochrome c-type biogenesis protein CcmB YP_RS12595 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YP_RS12600 IPR003439 ABC transporter-like YP_RS12600 IPR003593 AAA+ ATPase domain YP_RS12600 IPR005895 ABC transporter, haem export, CcmA YP_RS12600 IPR017871 ABC transporter, conserved site YP_RS12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12615 IPR007156 LemA YP_RS12615 IPR023353 LemA-like domain YP_RS12620 IPR018702 Protein of unknown function DUF2207, membrane YP_RS12625 IPR004624 PhnA protein YP_RS12625 IPR013987 PhnA protein, N-terminal YP_RS12625 IPR013988 PhnA protein, C-terminal YP_RS12635 IPR001207 Transposase, mutator type YP_RS12640 IPR007048 GpW/Gp25/anti-adapter protein IraD YP_RS12645 IPR009211 Predicted virulence protein, SciE type YP_RS12645 IPR011990 Tetratricopeptide-like helical domain YP_RS12655 IPR008727 PAAR motif YP_RS12660 IPR006531 Gp5 N-terminal YP_RS12660 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YP_RS12660 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YP_RS12665 IPR009612 ImcF-related YP_RS12665 IPR010623 Domain of unknown function DUF1215 YP_RS12665 IPR017731 Type VI secretion system, IcmF YP_RS12665 IPR025743 ImcF-related, N-terminal domain YP_RS12665 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12670 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS12670 IPR017732 Type IV / VI secretion system, DotU YP_RS12670 IPR017733 Type VI secretion system, OmpA/MotB domain YP_RS12675 IPR001270 ClpA/B family YP_RS12675 IPR002611 IstB-like ATP-binding protein YP_RS12675 IPR003593 AAA+ ATPase domain YP_RS12675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12675 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS12680 IPR001584 Integrase, catalytic core YP_RS12680 IPR006120 Resolvase, HTH domain YP_RS12680 IPR009057 Homeodomain-like YP_RS12680 IPR012337 Ribonuclease H-like domain YP_RS12685 IPR002509 Polysaccharide deacetylase YP_RS12685 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YP_RS12690 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YP_RS12695 IPR000515 MetI-like domain YP_RS12700 IPR000644 CBS domain YP_RS12700 IPR003439 ABC transporter-like YP_RS12700 IPR003593 AAA+ ATPase domain YP_RS12700 IPR005892 Glycine betaine transport ATP-binding subunit YP_RS12700 IPR017871 ABC transporter, conserved site YP_RS12700 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12705 IPR000358 Ribonucleotide reductase small subunit YP_RS12705 IPR009078 Ferritin-like superfamily YP_RS12705 IPR012348 Ribonucleotide reductase-related YP_RS12705 IPR026494 Ribonucleoside reductase subunit beta, NrdF YP_RS12705 IPR030475 YP_RS12705 YP_RS12710 IPR000788 Ribonucleotide reductase large subunit, C-terminal YP_RS12710 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YP_RS12710 IPR013346 Ribonucleotide reductase, class I , alpha subunit YP_RS12710 IPR013509 Ribonucleotide reductase large subunit, N-terminal YP_RS12710 IPR013554 Ribonucleotide reductase N-terminal YP_RS12710 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YP_RS12715 IPR004465 Ribonucleotide reductase Class Ib, NrdI YP_RS12715 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YP_RS12715 IPR029039 Flavoprotein-like YP_RS12720 IPR002109 Glutaredoxin YP_RS12720 IPR011909 Glutaredoxin-like protein NrdH YP_RS12720 IPR012336 Thioredoxin-like fold YP_RS12725 IPR009435 Acid shock YP_RS12725 IPR023497 Acid shock protein YP_RS12730 IPR018994 Protein of unknown function DUF2002 YP_RS12735 IPR001207 Transposase, mutator type YP_RS12740 IPR009587 Protein of unknown function DUF1198 YP_RS12745 IPR006983 MbeD/MobD-like YP_RS12750 IPR002059 Cold-shock protein, DNA-binding YP_RS12750 IPR011129 Cold shock protein YP_RS12750 IPR012156 Cold shock, CspA YP_RS12750 IPR012340 Nucleic acid-binding, OB-fold YP_RS12750 IPR019844 Cold-shock conserved site YP_RS12755 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS12755 IPR030678 YP_RS12755 YP_RS12760 IPR000515 MetI-like domain YP_RS12765 IPR000515 MetI-like domain YP_RS12770 IPR003439 ABC transporter-like YP_RS12770 IPR003593 AAA+ ATPase domain YP_RS12770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12775 IPR003439 ABC transporter-like YP_RS12775 IPR003593 AAA+ ATPase domain YP_RS12775 IPR017871 ABC transporter, conserved site YP_RS12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12780 IPR002026 Urease, gamma/gamma-beta subunit YP_RS12780 IPR012010 Urease, gamma subunit YP_RS12785 IPR002019 Urease, beta subunit YP_RS12790 IPR005848 Urease, alpha subunit YP_RS12790 IPR006680 Amidohydrolase 1 YP_RS12790 IPR011059 Metal-dependent hydrolase, composite domain YP_RS12790 IPR011612 Urease alpha-subunit, N-terminal domain YP_RS12790 IPR017950 Urease active site YP_RS12790 IPR029754 Urease nickel binding site YP_RS12790 IPR032466 YP_RS12790 YP_RS12795 IPR004029 UreE urease accessory, N-terminal YP_RS12795 IPR007864 Urease accessory protein UreE, C-terminal domain YP_RS12795 IPR012406 Urease accessory protein UreE YP_RS12800 IPR002639 Urease accessory protein UreF YP_RS12805 IPR003495 CobW/HypB/UreG domain YP_RS12805 IPR004400 Urease accessory protein UreG YP_RS12805 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12810 IPR002669 Urease accessory protein UreD YP_RS12815 IPR004937 Urea transporter YP_RS12815 IPR017807 Urea transporter, bacteria YP_RS12815 IPR029020 Ammonium/urea transporter YP_RS12820 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria YP_RS12820 IPR011541 Nickel/cobalt transporter, high-affinity YP_RS12825 IPR010486 HNS-dependent expression A/B YP_RS12825 IPR024972 HNS-dependent expression A YP_RS12825 IPR028623 HNS-dependent expression B YP_RS12835 IPR003148 Regulator of K+ conductance, N-terminal YP_RS12835 IPR013099 Two pore domain potassium channel domain YP_RS12835 IPR016040 NAD(P)-binding domain YP_RS12840 IPR003691 Putative fluoride ion transporter CrcB YP_RS12845 IPR003691 Putative fluoride ion transporter CrcB YP_RS12855 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YP_RS12860 IPR003352 Phosphotransferase system, EIIC YP_RS12860 IPR004501 Phosphotransferase system, EIIC component, type 3 YP_RS12860 IPR004796 Phosphotransferase system, cellobiose-type IIC component YP_RS12865 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit YP_RS12870 IPR003313 AraC-type arabinose-binding/dimerisation domain YP_RS12870 IPR009057 Homeodomain-like YP_RS12870 IPR011051 RmlC-like cupin domain YP_RS12870 IPR014710 RmlC-like jelly roll fold YP_RS12870 IPR018060 DNA binding HTH domain, AraC-type YP_RS12870 IPR018062 HTH domain AraC-type, conserved site YP_RS12870 IPR020449 Transcription regulator HTH, AraC- type YP_RS12875 IPR002509 Polysaccharide deacetylase YP_RS12875 IPR006879 Uncharacterised protein family UPF0249/HpnK YP_RS12875 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YP_RS12875 IPR022948 Uncharacterised protein family UPF0249 YP_RS12890 IPR005621 Regulation modulator SeqA YP_RS12890 IPR010985 Ribbon-helix-helix YP_RS12890 IPR013321 Arc-type ribbon-helix-helix YP_RS12890 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YP_RS12895 IPR005843 Alpha-D-phosphohexomutase, C-terminal YP_RS12895 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YP_RS12895 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YP_RS12895 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YP_RS12895 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YP_RS12895 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YP_RS12895 IPR016066 Alpha-D-phosphohexomutase, conserved site YP_RS12910 IPR000620 Drug/metabolite transporter YP_RS12915 IPR001789 Signal transduction response regulator, receiver domain YP_RS12915 IPR001867 Signal transduction response regulator, C-terminal YP_RS12915 IPR011006 CheY-like superfamily YP_RS12915 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS12920 IPR003018 GAF domain YP_RS12920 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS12920 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS12920 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YP_RS12920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS12920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS12920 IPR025201 Sensor protein KdpD, transmembrane domain YP_RS12920 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS12920 IPR029016 GAF domain-like YP_RS12925 IPR003820 Potassium-transporting ATPase C chain YP_RS12930 IPR001757 Cation-transporting P-type ATPase YP_RS12930 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA YP_RS12930 IPR008250 P-type ATPase, A domain YP_RS12930 IPR018303 P-type ATPase, phosphorylation site YP_RS12930 IPR023214 HAD-like domain YP_RS12930 IPR023299 P-type ATPase, cytoplasmic domain N YP_RS12935 IPR004623 Potassium-transporting ATPase A chain YP_RS12940 IPR011726 K+ transporting P-type ATPase, F subunit YP_RS12950 IPR019663 Uncharacterised protein YbfA YP_RS12955 IPR013560 Domain of unknown function DUF1722 YP_RS12960 IPR002081 Cryptochrome/DNA photolyase, class 1 YP_RS12960 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal YP_RS12960 IPR006050 DNA photolyase, N-terminal YP_RS12960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS12960 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal YP_RS12965 IPR000396 Cyclic-AMP phosphodiesterase, class-II YP_RS12965 IPR001279 Beta-lactamase-like YP_RS12965 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YP_RS12970 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YP_RS12980 IPR003778 Allophanate hydrolase subunit 2 YP_RS12980 IPR029000 Cyclophilin-like domain YP_RS12985 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YP_RS12985 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YP_RS12990 IPR010374 Protein of unknown function DUF969 YP_RS12995 IPR009323 Protein of unknown function DUF979 YP_RS13000 IPR000816 Peptidase C15, pyroglutamyl peptidase I YP_RS13000 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YP_RS13000 IPR029762 Pyroglutamyl peptidase I, bacterial-type YP_RS13005 IPR002043 Uracil-DNA glycosylase YP_RS13005 IPR005122 Uracil-DNA glycosylase-like YP_RS13005 IPR018085 Uracil-DNA glycosylase, active site YP_RS13010 IPR001150 Glycine radical domain YP_RS13010 IPR011140 Autonomous glycyl radical cofactor GrcA YP_RS13010 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YP_RS13015 IPR024499 Protein of unknown function DUF2974 YP_RS13015 IPR029058 Alpha/Beta hydrolase fold YP_RS13025 IPR002110 Ankyrin repeat YP_RS13025 IPR020683 Ankyrin repeat-containing domain YP_RS13030 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YP_RS13030 IPR001650 Helicase, C-terminal YP_RS13030 IPR011545 DEAD/DEAH box helicase domain YP_RS13030 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS13030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13030 IPR028621 ATP-dependent RNA helicase SrmB YP_RS13035 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS13035 IPR007848 Methyltransferase small domain YP_RS13035 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YP_RS13035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS13040 IPR003953 FAD binding domain YP_RS13040 IPR005288 L-aspartate oxidase YP_RS13040 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YP_RS13040 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS13040 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YP_RS13045 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YP_RS13045 IPR007627 RNA polymerase sigma-70 region 2 YP_RS13045 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13045 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YP_RS13045 IPR013324 RNA polymerase sigma factor, region 3/4 YP_RS13045 IPR013325 RNA polymerase sigma factor, region 2 YP_RS13045 IPR014284 RNA polymerase sigma-70 like domain YP_RS13045 IPR014286 RNA polymerase sigma-70 RpoE type YP_RS13050 IPR005572 Anti sigma-E protein RseA, N-terminal YP_RS13050 IPR005573 Anti sigma-E protein RseA, C-terminal YP_RS13050 IPR026279 Sigma-E factor negative regulatory protein RseA YP_RS13055 IPR005588 MucB/RseB YP_RS13055 IPR033434 YP_RS13055 YP_RS13055 IPR033436 YP_RS13055 YP_RS13060 IPR007359 Positive regulator of sigma(E), RseC/MucC YP_RS13060 IPR026268 Protein RseC YP_RS13070 IPR000640 Translation elongation factor EFG, V domain YP_RS13070 IPR000795 Elongation factor, GTP-binding domain YP_RS13070 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YP_RS13070 IPR005225 Small GTP-binding protein domain YP_RS13070 IPR006297 Elongation factor 4 YP_RS13070 IPR009022 Elongation factor G, III-V domain YP_RS13070 IPR013842 GTP-binding protein LepA, C-terminal YP_RS13070 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13070 IPR031157 YP_RS13070 YP_RS13075 IPR000223 Peptidase S26A, signal peptidase I YP_RS13075 IPR015927 Peptidase S24/S26A/S26B/S26C YP_RS13075 IPR019533 Peptidase S26 YP_RS13075 IPR019756 Peptidase S26A, signal peptidase I, serine active site YP_RS13075 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YP_RS13075 IPR019758 Peptidase S26A, signal peptidase I, conserved site YP_RS13075 IPR019759 Peptidase S24/S26A/S26B YP_RS13075 IPR019766 Peptidase S26A, all-beta subdomain YP_RS13075 IPR028360 Peptidase S24/S26, beta-ribbon domain YP_RS13080 IPR000999 Ribonuclease III domain YP_RS13080 IPR011907 Ribonuclease III YP_RS13080 IPR014720 Double-stranded RNA-binding domain YP_RS13085 IPR004044 K Homology domain, type 2 YP_RS13085 IPR005225 Small GTP-binding protein domain YP_RS13085 IPR005662 GTP-binding protein Era YP_RS13085 IPR006073 GTP binding domain YP_RS13085 IPR009019 K homology domain, prokaryotic type YP_RS13085 IPR015946 K homology domain-like, alpha/beta YP_RS13085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13090 IPR003717 Recombination protein O, RecO YP_RS13090 IPR012340 Nucleic acid-binding, OB-fold YP_RS13090 IPR022572 DNA replication/recombination mediator RecO, N-terminal YP_RS13095 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YP_RS13095 IPR013785 Aldolase-type TIM barrel YP_RS13100 IPR002582 Holo-[acyl carrier protein] synthase YP_RS13100 IPR004568 Phosphopantethiene-protein transferase domain YP_RS13100 IPR008278 4'-phosphopantetheinyl transferase superfamily YP_RS13110 IPR002686 Transposase IS200-like YP_RS13115 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS13115 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS13120 IPR001347 Sugar isomerase (SIS) YP_RS13125 IPR001584 Integrase, catalytic core YP_RS13125 IPR006120 Resolvase, HTH domain YP_RS13125 IPR009057 Homeodomain-like YP_RS13125 IPR012337 Ribonuclease H-like domain YP_RS13130 IPR001270 ClpA/B family YP_RS13130 IPR002611 IstB-like ATP-binding protein YP_RS13130 IPR003593 AAA+ ATPase domain YP_RS13130 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13130 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS13135 IPR000281 Helix-turn-helix protein RpiR YP_RS13135 IPR009057 Homeodomain-like YP_RS13135 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13140 IPR001347 Sugar isomerase (SIS) YP_RS13140 IPR005486 Glucokinase regulatory protein, conserved site YP_RS13140 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YP_RS13140 IPR009060 UBA-like YP_RS13145 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YP_RS13145 IPR023214 HAD-like domain YP_RS13150 IPR016192 APOBEC/CMP deaminase, zinc-binding YP_RS13150 IPR016193 Cytidine deaminase-like YP_RS13150 IPR028883 tRNA-specific adenosine deaminase YP_RS13155 IPR000189 Prokaryotic transglycosylase, active site YP_RS13155 IPR001638 Extracellular solute-binding protein, family 3 YP_RS13155 IPR008258 Lytic transglycosylase-like SLT domain YP_RS13155 IPR023346 Lysozyme-like domain YP_RS13155 IPR023703 Membrane-bound lytic murein transglycosylase F YP_RS13160 IPR010073 Phosphoribosylformylglycinamidine synthase YP_RS13160 IPR010918 AIR synthase-related protein, C-terminal domain YP_RS13160 IPR016188 PurM, N-terminal-like YP_RS13160 IPR029062 Class I glutamine amidotransferase-like YP_RS13180 IPR002686 Transposase IS200-like YP_RS13185 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS13185 IPR003660 HAMP linker domain YP_RS13185 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS13185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS13190 IPR025262 Quorum-sensing regulator protein G YP_RS13195 IPR001789 Signal transduction response regulator, receiver domain YP_RS13195 IPR002078 RNA polymerase sigma factor 54 interaction domain YP_RS13195 IPR003593 AAA+ ATPase domain YP_RS13195 IPR009057 Homeodomain-like YP_RS13195 IPR011006 CheY-like superfamily YP_RS13195 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YP_RS13195 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YP_RS13195 IPR025944 Sigma-54 interaction domain, conserved site YP_RS13195 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13200 IPR000132 Nitrilase/cyanide hydratase, conserved site YP_RS13200 IPR003010 Carbon-nitrogen hydrolase YP_RS13200 IPR003694 NAD(+) synthetase YP_RS13200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS13200 IPR022310 NAD/GMP synthase YP_RS13205 IPR002187 Nitrogen regulatory protein PII YP_RS13205 IPR002332 Nitrogen regulatory protein P-II, urydylation site YP_RS13205 IPR011322 Nitrogen regulatory PII-like, alpha/beta YP_RS13205 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YP_RS13205 IPR017918 Nitrogen regulatory protein PII, conserved site YP_RS13210 IPR032791 YP_RS13210 YP_RS13215 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13215 IPR032791 YP_RS13215 YP_RS13220 IPR000971 Globin YP_RS13220 IPR001221 Phenol hydroxylase reductase YP_RS13220 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS13220 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YP_RS13220 IPR008333 Oxidoreductase, FAD-binding domain YP_RS13220 IPR009050 Globin-like YP_RS13220 IPR012292 Globin, structural domain YP_RS13220 IPR017938 Riboflavin synthase-like beta-barrel YP_RS13220 IPR023950 Flavohemoprotein YP_RS13225 IPR001085 Serine hydroxymethyltransferase YP_RS13225 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS13225 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS13225 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS13225 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YP_RS13235 IPR000758 Virulence-related outer membrane protein YP_RS13235 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YP_RS13235 IPR027385 Outer membrane protein beta-barrel YP_RS13240 IPR020846 Major facilitator superfamily domain YP_RS13240 IPR024989 Major facilitator superfamily associated domain YP_RS13240 IPR026032 Phenylproprionate/maltose permease YP_RS13245 IPR011608 PRD domain YP_RS13250 IPR010412 Protein of unknown function DUF1007 YP_RS13250 IPR016537 Uncharacterised conserved protein UCP008159, YP_RS13255 IPR011541 Nickel/cobalt transporter, high-affinity YP_RS13260 IPR000760 Inositol monophosphatase YP_RS13260 IPR020550 Inositol monophosphatase, conserved site YP_RS13260 IPR020583 Inositol monophosphatase, metal-binding site YP_RS13260 IPR022337 Inositol monophosphatase, SuhB YP_RS13265 IPR001537 tRNA/rRNA methyltransferase, SpoU type YP_RS13265 IPR004384 RNA methyltransferase TrmH, group 1 YP_RS13265 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS13265 IPR029028 Alpha/beta knot methyltransferases YP_RS13270 IPR000944 Transcription regulator Rrf2-like YP_RS13270 IPR010242 Transcription factor HTH, IscR YP_RS13270 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13270 IPR030489 YP_RS13270 YP_RS13275 IPR000192 Aminotransferase class V domain YP_RS13275 IPR010240 Cysteine desulfurase YP_RS13275 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS13275 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS13275 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS13275 IPR016454 Cysteine desulfurase, NifS YP_RS13275 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YP_RS13280 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YP_RS13280 IPR011339 ISC system FeS cluster assembly, IscU scaffold YP_RS13285 IPR000361 FeS cluster biogenesis YP_RS13285 IPR011302 ISC system FeS cluster assembly, IscA scaffold YP_RS13285 IPR016092 FeS cluster insertion protein YP_RS13285 IPR017870 FeS cluster insertion, C-terminal, conserved site YP_RS13290 IPR001623 DnaJ domain YP_RS13290 IPR004640 Co-chaperone Hsc20 YP_RS13290 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YP_RS13295 IPR010236 ISC system FeS cluster assembly, HscA chaperone YP_RS13295 IPR013126 Heat shock protein 70 family YP_RS13295 IPR018181 Heat shock protein 70, conserved site YP_RS13295 IPR029047 Heat shock protein 70kD, peptide-binding domain YP_RS13295 IPR029048 Heat shock protein 70kD, C-terminal domain YP_RS13300 IPR001041 2Fe-2S ferredoxin-type domain YP_RS13300 IPR001055 Adrenodoxin YP_RS13300 IPR011536 Ferredoxin, 2Fe-2S type YP_RS13300 IPR012675 Beta-grasp domain YP_RS13300 IPR018298 Adrenodoxin, iron-sulphur binding site YP_RS13305 IPR007479 ISC system FeS cluster assembly, IscX YP_RS13310 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YP_RS13310 IPR008330 Peptidase M17, peptidase B YP_RS13310 IPR011356 Leucine aminopeptidase/peptidase B YP_RS13315 IPR009839 SseB protein N-terminal domain YP_RS13315 IPR027945 SseB protein, C-terminal YP_RS13320 IPR003991 Pertactin virulence factor family YP_RS13320 IPR005546 Autotransporter beta-domain YP_RS13320 IPR006315 Outer membrane autotransporter barrel YP_RS13325 IPR004899 Pertactin, central region YP_RS13325 IPR005546 Autotransporter beta-domain YP_RS13325 IPR006315 Outer membrane autotransporter barrel YP_RS13325 IPR011050 Pectin lyase fold/virulence factor YP_RS13325 IPR012332 P22 tailspike C-terminal domain-like YP_RS13330 IPR001207 Transposase, mutator type YP_RS13335 IPR000015 Outer membrane usher protein YP_RS13335 IPR025885 PapC, N-terminal domain YP_RS13340 IPR001829 Pili assembly chaperone, bacterial YP_RS13340 IPR008962 PapD-like YP_RS13340 IPR016147 PapD, N-terminal, bacterial YP_RS13340 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS13340 IPR018046 Pili assembly chaperone, conserved site YP_RS13345 IPR000259 Fimbrial-type adhesion domain YP_RS13345 IPR008966 Adhesion domain YP_RS13350 IPR001270 ClpA/B family YP_RS13350 IPR003593 AAA+ ATPase domain YP_RS13350 IPR003959 ATPase, AAA-type, core YP_RS13350 IPR004176 Clp, N-terminal YP_RS13350 IPR017729 Type VI secretion system, ATPase ClpV1 YP_RS13350 IPR018368 ClpA/B, conserved site 1 YP_RS13350 IPR019489 Clp ATPase, C-terminal YP_RS13350 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13350 IPR028299 ClpA/B, conserved site 2 YP_RS13355 IPR010272 Type VI secretion system, VCA0110 YP_RS13360 IPR010732 Protein of unknown function DUF1305 YP_RS13365 IPR010657 ImpA, N-terminal YP_RS13370 IPR000259 Fimbrial-type adhesion domain YP_RS13370 IPR008966 Adhesion domain YP_RS13385 IPR006664 Outer membrane protein, bacterial YP_RS13385 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS13390 IPR014894 Protein DcrB YP_RS13390 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YP_RS13395 IPR000792 Transcription regulator LuxR, C-terminal YP_RS13395 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13395 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS13400 IPR011757 Lytic transglycosylase MltB YP_RS13400 IPR023346 Lysozyme-like domain YP_RS13400 IPR031304 YP_RS13400 YP_RS13405 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YP_RS13405 IPR026045 Ferric binding protein YP_RS13410 IPR000515 MetI-like domain YP_RS13415 IPR003439 ABC transporter-like YP_RS13415 IPR003593 AAA+ ATPase domain YP_RS13415 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS13415 IPR017871 ABC transporter, conserved site YP_RS13415 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13420 IPR014591 Uncharacterised conserved protein UCP034455 YP_RS13420 IPR021125 Protein of unknown function DUF2127 YP_RS13425 IPR008514 Type VI secretion system effector, Hcp YP_RS13430 IPR025320 Protein of unknown function DUF4225 YP_RS13435 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YP_RS13435 IPR006656 Molybdopterin oxidoreductase YP_RS13435 IPR006657 Molydopterin dinucleotide-binding domain YP_RS13435 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YP_RS13435 IPR009010 Aspartate decarboxylase-like domain YP_RS13435 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YP_RS13435 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YP_RS13435 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YP_RS13440 IPR014297 Dimethylsulphoxide reductase, chain B YP_RS13440 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS13440 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS13445 IPR007059 DMSO reductase anchor subunit (DmsC) YP_RS13450 IPR020945 DMSO/Nitrate reductase chaperone YP_RS13450 IPR026269 Tat proofreading chaperone DmsD-type YP_RS13455 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS13455 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS13460 IPR008517 Protein of unknown function DUF799 YP_RS13465 IPR014508 Uncharacterised conserved protein, TPR-like repeat YP_RS13470 IPR005534 Curli production assembly/transport component CsgG YP_RS13470 IPR007195 TolB, N-terminal YP_RS13475 IPR032753 YP_RS13475 YP_RS13480 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YP_RS13480 IPR016174 Di-haem cytochrome, transmembrane YP_RS13485 IPR004839 Aminotransferase, class I/classII YP_RS13485 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS13485 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS13485 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS13490 IPR010856 Protein of unknown function DUF1479 YP_RS13490 IPR027443 Isopenicillin N synthase-like YP_RS13495 IPR003836 Glucokinase YP_RS13500 IPR007896 Transmembrane pair, bacterial YP_RS13505 IPR000847 Transcription regulator HTH, LysR YP_RS13505 IPR005119 LysR, substrate-binding YP_RS13505 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13510 IPR001395 Aldo/keto reductase YP_RS13510 IPR023210 NADP-dependent oxidoreductase domain YP_RS13515 IPR019638 Protein of unknown function DUF2502 YP_RS13520 IPR001046 NRAMP family YP_RS13525 IPR002668 Concentrative nucleoside transporter N-terminal domain YP_RS13525 IPR008276 Concentrative nucleoside transporter YP_RS13525 IPR011642 Nucleoside recognition Gate YP_RS13525 IPR011657 Concentrative nucleoside transporter C-terminal domain YP_RS13550 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YP_RS13550 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS13550 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YP_RS13550 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YP_RS13550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS13550 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YP_RS13550 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain YP_RS13550 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YP_RS13560 IPR009267 Protein of unknown function DUF925 YP_RS13565 IPR025577 FlxA-like protein YP_RS13570 IPR024530 Protein of unknown function DUF3820 YP_RS13575 IPR001357 BRCT domain YP_RS13575 IPR001679 NAD-dependent DNA ligase YP_RS13575 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YP_RS13575 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YP_RS13575 IPR004150 NAD-dependent DNA ligase, OB-fold YP_RS13575 IPR010994 RuvA domain 2-like YP_RS13575 IPR012340 Nucleic acid-binding, OB-fold YP_RS13575 IPR013839 NAD-dependent DNA ligase, adenylation YP_RS13575 IPR013840 NAD-dependent DNA ligase, N-terminal YP_RS13575 IPR018239 NAD-dependent DNA ligase, active site YP_RS13575 IPR033136 YP_RS13575 YP_RS13580 IPR007449 ZipA, C-terminal FtsZ-binding domain YP_RS13580 IPR011919 Cell division protein ZipA YP_RS13585 IPR022985 CysZ, gammaproteobacteria YP_RS13590 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YP_RS13590 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS13590 IPR005856 Cysteine synthase K/M YP_RS13590 IPR005859 Cysteine synthase A YP_RS13595 IPR000032 Phosphocarrier HPr protein-like YP_RS13595 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YP_RS13595 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YP_RS13600 IPR000121 PEP-utilising enzyme, C-terminal YP_RS13600 IPR006318 Phosphoenolpyruvate-utilising enzyme YP_RS13600 IPR008279 PEP-utilising enzyme, mobile domain YP_RS13600 IPR008731 Phosphotransferase system, enzyme I N-terminal YP_RS13600 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS13600 IPR018274 PEP-utilising enzyme, active site YP_RS13600 IPR023151 PEP-utilising enzyme, conserved site YP_RS13600 IPR024692 Phosphotransferase system, enzyme I YP_RS13605 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YP_RS13605 IPR011055 Duplicated hybrid motif YP_RS13610 IPR002686 Transposase IS200-like YP_RS13620 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS13620 IPR003660 HAMP linker domain YP_RS13620 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS13620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS13625 IPR001789 Signal transduction response regulator, receiver domain YP_RS13625 IPR001867 Signal transduction response regulator, C-terminal YP_RS13625 IPR011006 CheY-like superfamily YP_RS13625 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13625 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS13630 IPR006143 RND efflux pump, membrane fusion protein YP_RS13630 IPR032317 YP_RS13630 YP_RS13635 IPR003439 ABC transporter-like YP_RS13635 IPR003593 AAA+ ATPase domain YP_RS13635 IPR003838 Permease FtsX-like YP_RS13635 IPR017871 ABC transporter, conserved site YP_RS13635 IPR025857 MacB-like periplasmic core domain YP_RS13635 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13640 IPR001763 Rhodanese-like domain YP_RS13640 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_RS13640 IPR016156 FAD/NAD-linked reductase, dimerisation domain YP_RS13640 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS13645 IPR001734 Sodium/solute symporter YP_RS13650 IPR021741 Protein of unknown function DUF3311 YP_RS13655 IPR000587 Creatinase, N-terminal YP_RS13655 IPR000994 Peptidase M24, structural domain YP_RS13655 IPR028980 Creatinase/Aminopeptidase P, N-terminal YP_RS13660 IPR000587 Creatinase, N-terminal YP_RS13660 IPR028980 Creatinase/Aminopeptidase P, N-terminal YP_RS13660 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YP_RS13665 IPR004839 Aminotransferase, class I/classII YP_RS13665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS13665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS13665 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS13665 IPR027619 Putative C-S lyase YP_RS13670 IPR002035 von Willebrand factor, type A YP_RS13675 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS13675 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS13675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS13680 IPR001789 Signal transduction response regulator, receiver domain YP_RS13680 IPR001867 Signal transduction response regulator, C-terminal YP_RS13680 IPR011006 CheY-like superfamily YP_RS13680 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13680 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS13685 IPR032675 YP_RS13685 YP_RS13690 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YP_RS13690 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS13690 IPR005856 Cysteine synthase K/M YP_RS13690 IPR005858 Cysteine synthase B YP_RS13695 IPR003439 ABC transporter-like YP_RS13695 IPR003593 AAA+ ATPase domain YP_RS13695 IPR005666 Sulphate transport system permease protein 1 YP_RS13695 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS13695 IPR017871 ABC transporter, conserved site YP_RS13695 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13700 IPR000515 MetI-like domain YP_RS13700 IPR005667 Sulphate ABC transporter permease protein 2 YP_RS13700 IPR011866 Sulphate ABC transporter, permease protein CysW YP_RS13705 IPR000515 MetI-like domain YP_RS13705 IPR005667 Sulphate ABC transporter permease protein 2 YP_RS13705 IPR011865 Sulphate ABC transporter, permease protein CysT YP_RS13710 IPR005669 Thiosulphate/Sulfate-binding protein YP_RS13715 IPR004742 Sialic acid transporter YP_RS13715 IPR011701 Major facilitator superfamily YP_RS13715 IPR020846 Major facilitator superfamily domain YP_RS13720 IPR000281 Helix-turn-helix protein RpiR YP_RS13720 IPR001347 Sugar isomerase (SIS) YP_RS13720 IPR009057 Homeodomain-like YP_RS13720 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13730 IPR004375 Conserved hypothetical protein CHP00022 YP_RS13735 IPR000600 ROK YP_RS13735 IPR023945 N-acetylmannosamine kinase, bacterial YP_RS13740 IPR001611 Leucine-rich repeat YP_RS13740 IPR003591 Leucine-rich repeat, typical subtype YP_RS13740 IPR032674 YP_RS13740 YP_RS13740 IPR032675 YP_RS13740 YP_RS13745 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YP_RS13745 IPR011060 Ribulose-phosphate binding barrel YP_RS13745 IPR013785 Aldolase-type TIM barrel YP_RS13750 IPR002220 DapA-like YP_RS13750 IPR013785 Aldolase-type TIM barrel YP_RS13750 IPR020624 Dihydrodipicolinate synthetase, conserved site YP_RS13755 IPR006314 Dyp-type peroxidase YP_RS13755 IPR011008 Dimeric alpha-beta barrel YP_RS13760 IPR010938 Protein of unknown function DUF1131 YP_RS13765 IPR005220 Viral OB-fold, YgiW YP_RS13765 IPR016052 Bacteriophage 933W, L0136 YP_RS13770 IPR003991 Pertactin virulence factor family YP_RS13770 IPR004899 Pertactin, central region YP_RS13770 IPR005546 Autotransporter beta-domain YP_RS13770 IPR006315 Outer membrane autotransporter barrel YP_RS13770 IPR011050 Pectin lyase fold/virulence factor YP_RS13770 IPR012332 P22 tailspike C-terminal domain-like YP_RS13785 IPR000182 GNAT domain YP_RS13785 IPR016181 Acyl-CoA N-acyltransferase YP_RS13785 IPR023072 Acetyltransferase, YpeA YP_RS13790 IPR001260 Coproporphyrinogen III oxidase, aerobic YP_RS13790 IPR018375 Coproporphyrinogen III oxidase, conserved site YP_RS13795 IPR003791 Protein of unknown function UPF0178 YP_RS13800 IPR002505 Phosphate acetyl/butaryl transferase YP_RS13800 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase YP_RS13800 IPR012301 Malic enzyme, N-terminal domain YP_RS13800 IPR012302 Malic enzyme, NAD-binding YP_RS13800 IPR015884 Malic enzyme, conserved site YP_RS13800 IPR016040 NAD(P)-binding domain YP_RS13805 IPR000086 NUDIX hydrolase domain YP_RS13805 IPR004385 Nucleoside diphosphate pyrophosphatase YP_RS13805 IPR015797 NUDIX hydrolase domain-like YP_RS13810 IPR005126 NapC/NirT cytochrome c, N-terminal YP_RS13810 IPR011031 Multihaem cytochrome YP_RS13810 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YP_RS13810 IPR024717 Denitrification system component NapC/NirT/NrfH YP_RS13815 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YP_RS13815 IPR011031 Multihaem cytochrome YP_RS13815 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain YP_RS13820 IPR006656 Molybdopterin oxidoreductase YP_RS13820 IPR006657 Molydopterin dinucleotide-binding domain YP_RS13820 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YP_RS13820 IPR009010 Aspartate decarboxylase-like domain YP_RS13820 IPR010051 Periplasmic nitrate reductase, large subunit YP_RS13820 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YP_RS13820 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YP_RS13825 IPR005623 Chaperone NapD, nitrate reductase assembly YP_RS13830 IPR004496 Ferredoxin-type protein NapF YP_RS13830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS13830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS13835 IPR000792 Transcription regulator LuxR, C-terminal YP_RS13835 IPR001789 Signal transduction response regulator, receiver domain YP_RS13835 IPR011006 CheY-like superfamily YP_RS13835 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS13835 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS13840 IPR017162 Uncharacterised conserved protein UCP037266 YP_RS13845 IPR001036 Acriflavin resistance protein YP_RS13845 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YP_RS13845 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YP_RS13855 IPR007404 Protein of unknown function DUF457 YP_RS13870 IPR003439 ABC transporter-like YP_RS13870 IPR003593 AAA+ ATPase domain YP_RS13870 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS13870 IPR017871 ABC transporter, conserved site YP_RS13870 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13885 IPR011990 Tetratricopeptide-like helical domain YP_RS13890 IPR006504 Transcriptional regulator Spx/MgsR YP_RS13890 IPR006660 Arsenate reductase-like YP_RS13890 IPR012336 Thioredoxin-like fold YP_RS13895 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YP_RS13895 IPR002933 Peptidase M20 YP_RS13895 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YP_RS13895 IPR011650 Peptidase M20, dimerisation domain YP_RS13900 IPR003709 Peptidase M15B/M15C YP_RS13900 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YP_RS13905 IPR020910 Uncharacterised protein family UPF0370 YP_RS13910 IPR000182 GNAT domain YP_RS13910 IPR007807 Helicase domain YP_RS13910 IPR013562 Domain of unknown function DUF1726 YP_RS13910 IPR016181 Acyl-CoA N-acyltransferase YP_RS13910 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YP_RS13910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13910 IPR032672 YP_RS13910 YP_RS13910 IPR033442 YP_RS13910 YP_RS13915 IPR007382 Uncharacterised protein family UPF0756, transmembrame YP_RS13920 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YP_RS13925 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YP_RS13925 IPR013816 ATP-grasp fold, subdomain 2 YP_RS13925 IPR018236 SAICAR synthetase, conserved site YP_RS13925 IPR028923 SAICAR synthetase/ADE2, N-terminal YP_RS13930 IPR002686 Transposase IS200-like YP_RS13940 IPR010653 Lipoprotein, NlpB YP_RS13940 IPR014524 Outer membrane protein assembly factor BamC YP_RS13945 IPR002220 DapA-like YP_RS13945 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YP_RS13945 IPR013785 Aldolase-type TIM barrel YP_RS13945 IPR020624 Dihydrodipicolinate synthetase, conserved site YP_RS13945 IPR020625 Dihydrodipicolinate synthetase, active site YP_RS13950 IPR016867 Glycine cleavage repressor GcvR YP_RS13955 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YP_RS13955 IPR012336 Thioredoxin-like fold YP_RS13955 IPR024706 Peroxiredoxin, AhpC-type YP_RS13975 IPR002549 Uncharacterised protein family UPF0118 YP_RS13980 IPR001915 Peptidase M48 YP_RS13980 IPR011716 Tetratricopeptide TPR-3 YP_RS13980 IPR011990 Tetratricopeptide-like helical domain YP_RS13980 IPR030873 YP_RS13980 YP_RS13985 IPR006659 Arsenate reductase YP_RS13985 IPR006660 Arsenate reductase-like YP_RS13985 IPR012336 Thioredoxin-like fold YP_RS13990 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YP_RS13990 IPR017788 DnaA regulatory inactivator Hda YP_RS13990 IPR020591 Chromosomal replication control, initiator DnaA-like YP_RS13990 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YP_RS13990 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS13995 IPR002686 Transposase IS200-like YP_RS14000 IPR005765 Uracil phosphoribosyl transferase YP_RS14000 IPR029057 Phosphoribosyltransferase-like YP_RS14005 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YP_RS14005 IPR010918 AIR synthase-related protein, C-terminal domain YP_RS14005 IPR016188 PurM, N-terminal-like YP_RS14010 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YP_RS14010 IPR002376 Formyl transferase, N-terminal YP_RS14010 IPR004607 Phosphoribosylglycinamide formyltransferase YP_RS14015 IPR000182 GNAT domain YP_RS14015 IPR016181 Acyl-CoA N-acyltransferase YP_RS14020 IPR020193 Flagellin lysine-N-methylase, C-terminal YP_RS14025 IPR005358 Putative zinc- or iron-chelating domain containing protein YP_RS14030 IPR003439 ABC transporter-like YP_RS14030 IPR003593 AAA+ ATPase domain YP_RS14030 IPR005670 Phosphate transport system permease protein 1 YP_RS14030 IPR017871 ABC transporter, conserved site YP_RS14030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14035 IPR000515 MetI-like domain YP_RS14035 IPR005672 Phosphate transport system permease protein PstA YP_RS14040 IPR000515 MetI-like domain YP_RS14040 IPR015943 WD40/YVTN repeat-like-containing domain YP_RS14045 IPR003414 Polyphosphate kinase YP_RS14045 IPR024953 Polyphosphate kinase middle domain YP_RS14045 IPR025198 Polyphosphate kinase N-terminal domain YP_RS14045 IPR025200 Polyphosphate kinase C-terminal domain YP_RS14050 IPR003695 Ppx/GppA phosphatase YP_RS14050 IPR022371 Exopolyphosphatase YP_RS14050 IPR030673 YP_RS14050 YP_RS14055 IPR022576 Protein of unknown function DUF2633 YP_RS14060 IPR000644 CBS domain YP_RS14060 IPR006667 SLC41 divalent cation transporters, integral membrane domain YP_RS14060 IPR006668 Magnesium transporter, MgtE intracellular domain YP_RS14060 IPR006669 Magnesium transporter MgtE YP_RS14065 IPR013126 Heat shock protein 70 family YP_RS14065 IPR018181 Heat shock protein 70, conserved site YP_RS14070 IPR000515 MetI-like domain YP_RS14075 IPR000515 MetI-like domain YP_RS14085 IPR004632 4-aminobutyrate aminotransferase, bacterial YP_RS14085 IPR005814 Aminotransferase class-III YP_RS14085 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS14085 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS14085 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS14090 IPR000524 Transcription regulator HTH, GntR YP_RS14090 IPR004839 Aminotransferase, class I/classII YP_RS14090 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS14090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS14090 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS14095 IPR003439 ABC transporter-like YP_RS14095 IPR003593 AAA+ ATPase domain YP_RS14095 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YP_RS14095 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS14095 IPR013611 Transport-associated OB, type 2 YP_RS14095 IPR017871 ABC transporter, conserved site YP_RS14095 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14100 IPR006143 RND efflux pump, membrane fusion protein YP_RS14100 IPR022824 Multidrug resistance protein MdtA YP_RS14105 IPR001036 Acriflavin resistance protein YP_RS14105 IPR022831 Multidrug resistance protein MdtB YP_RS14105 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YP_RS14110 IPR001036 Acriflavin resistance protein YP_RS14110 IPR023931 Multidrug resistance protein MdtC YP_RS14110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YP_RS14115 IPR004638 Drug resistance transporter EmrB/QacA subfamily YP_RS14115 IPR011701 Major facilitator superfamily YP_RS14115 IPR020846 Major facilitator superfamily domain YP_RS14115 IPR023721 Multidrug resistance protein MdtD, putative YP_RS14120 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS14120 IPR003660 HAMP linker domain YP_RS14120 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS14120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS14125 IPR001789 Signal transduction response regulator, receiver domain YP_RS14125 IPR001867 Signal transduction response regulator, C-terminal YP_RS14125 IPR011006 CheY-like superfamily YP_RS14125 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS14130 IPR010879 Domain of unknown function DUF1508 YP_RS14135 IPR001539 Peptidase U32 YP_RS14135 IPR032525 YP_RS14135 YP_RS14140 IPR001206 Diacylglycerol kinase, catalytic domain YP_RS14140 IPR005218 Diacylglycerol/lipid kinase YP_RS14140 IPR016064 ATP-NAD kinase-like domain YP_RS14140 IPR022433 Lipid kinase YegS YP_RS14145 IPR014453 Inhibitor of vertebrate lysozyme YP_RS14155 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YP_RS14155 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YP_RS14155 IPR029056 Ribokinase-like YP_RS14160 IPR010351 Protein of unknown function DUF943 YP_RS14170 IPR001207 Transposase, mutator type YP_RS14180 IPR010665 Protein of unknown function DUF1240 YP_RS14185 IPR010665 Protein of unknown function DUF1240 YP_RS14190 IPR010665 Protein of unknown function DUF1240 YP_RS14195 IPR010665 Protein of unknown function DUF1240 YP_RS14200 IPR008514 Type VI secretion system effector, Hcp YP_RS14205 IPR002686 Transposase IS200-like YP_RS14215 IPR001674 GMP synthase, C-terminal YP_RS14215 IPR004739 GMP synthase, N-terminal YP_RS14215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS14215 IPR017926 Glutamine amidotransferase YP_RS14215 IPR022310 NAD/GMP synthase YP_RS14215 IPR022955 GMP synthase YP_RS14215 IPR029062 Class I glutamine amidotransferase-like YP_RS14225 IPR000644 CBS domain YP_RS14225 IPR001093 IMP dehydrogenase/GMP reductase YP_RS14225 IPR005990 Inosine-5'-monophosphate dehydrogenase YP_RS14225 IPR013785 Aldolase-type TIM barrel YP_RS14225 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YP_RS14230 IPR003753 Exonuclease VII, large subunit YP_RS14230 IPR020579 Exonuclease VII, large subunit, C-terminal YP_RS14230 IPR025824 OB-fold nucleic acid binding domain YP_RS14235 IPR010807 Protein of unknown function DUF1407 YP_RS14235 IPR029037 YfgJ-like YP_RS14240 IPR004776 Auxin efflux carrier YP_RS14245 IPR005225 Small GTP-binding protein domain YP_RS14245 IPR006073 GTP binding domain YP_RS14245 IPR015946 K homology domain-like, alpha/beta YP_RS14245 IPR016484 GTP-binding protein EngA YP_RS14245 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14245 IPR032859 YP_RS14245 YP_RS14250 IPR002372 Pyrrolo-quinoline quinone repeat YP_RS14250 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily YP_RS14250 IPR017687 Outer membrane protein assembly factor BamB YP_RS14250 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YP_RS14250 IPR027295 Quinonprotein alcohol dehydrogenase-like domain YP_RS14255 IPR011990 Tetratricopeptide-like helical domain YP_RS14255 IPR018704 Domain of unknown function DUF09976 YP_RS14255 IPR026039 Uncharacterised protein family UPF0070 YP_RS14260 IPR004154 Anticodon-binding YP_RS14260 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YP_RS14260 IPR015807 Histidine-tRNA ligase YP_RS14265 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YP_RS14265 IPR013785 Aldolase-type TIM barrel YP_RS14265 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YP_RS14265 IPR029065 Enolase C-terminal domain-like YP_RS14270 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS14270 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS14270 IPR023690 Cytoskeleton protein RodZ YP_RS14270 IPR025194 Domain of unknown function DUF4115 YP_RS14275 IPR011990 Tetratricopeptide-like helical domain YP_RS14275 IPR013360 Pilus biogenesis/stability type IV, PilW YP_RS14275 IPR019734 Tetratricopeptide repeat YP_RS14280 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YP_RS14280 IPR007197 Radical SAM YP_RS14280 IPR013785 Aldolase-type TIM barrel YP_RS14280 IPR027492 Dual-specificity RNA methyltransferase RlmN YP_RS14285 IPR001564 Nucleoside diphosphate kinase YP_RS14285 IPR023005 Nucleoside diphosphate kinase, active site YP_RS14290 IPR001064 Beta/gamma crystallin YP_RS14290 IPR011024 Gamma-crystallin-related YP_RS14290 IPR013320 Concanavalin A-like lectin/glucanase, subgroup YP_RS14290 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal YP_RS14290 IPR015185 Exotoxin A, binding YP_RS14290 IPR016181 Acyl-CoA N-acyltransferase YP_RS14300 IPR004899 Pertactin, central region YP_RS14300 IPR005546 Autotransporter beta-domain YP_RS14300 IPR006315 Outer membrane autotransporter barrel YP_RS14300 IPR011050 Pectin lyase fold/virulence factor YP_RS14300 IPR012332 P22 tailspike C-terminal domain-like YP_RS14300 IPR030930 YP_RS14300 YP_RS14310 IPR001207 Transposase, mutator type YP_RS14315 IPR000015 Outer membrane usher protein YP_RS14315 IPR025949 PapC-like, C-terminal domain YP_RS14320 IPR000259 Fimbrial-type adhesion domain YP_RS14320 IPR008966 Adhesion domain YP_RS14325 IPR008312 Uncharacterised conserved protein UCP028301 YP_RS14330 IPR010269 Protein of unknown function DUF877 YP_RS14335 IPR008514 Type VI secretion system effector, Hcp YP_RS14340 IPR017734 Type VI secretion system, lipoprotein SciN YP_RS14345 IPR010263 Protein of unknown function DUF876 YP_RS14350 IPR017732 Type IV / VI secretion system, DotU YP_RS14355 IPR001584 Integrase, catalytic core YP_RS14355 IPR006120 Resolvase, HTH domain YP_RS14355 IPR009057 Homeodomain-like YP_RS14355 IPR012337 Ribonuclease H-like domain YP_RS14360 IPR001270 ClpA/B family YP_RS14360 IPR002611 IstB-like ATP-binding protein YP_RS14360 IPR003593 AAA+ ATPase domain YP_RS14360 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14360 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS14365 IPR002509 Polysaccharide deacetylase YP_RS14365 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YP_RS14375 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin YP_RS14385 IPR006054 DNA polymerase III, epsilon subunit YP_RS14385 IPR006309 DNA polymerase 3, epsilon subunit YP_RS14385 IPR012337 Ribonuclease H-like domain YP_RS14385 IPR013520 Exonuclease, RNase T/DNA polymerase III YP_RS14390 IPR002156 Ribonuclease H domain YP_RS14390 IPR012337 Ribonuclease H-like domain YP_RS14390 IPR022892 Ribonuclease H YP_RS14395 IPR013216 Methyltransferase type 11 YP_RS14395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS14400 IPR001279 Beta-lactamase-like YP_RS14400 IPR017782 Hydroxyacylglutathione hydrolase YP_RS14400 IPR032282 YP_RS14400 YP_RS14405 IPR000189 Prokaryotic transglycosylase, active site YP_RS14405 IPR008258 Lytic transglycosylase-like SLT domain YP_RS14405 IPR013321 Arc-type ribbon-helix-helix YP_RS14405 IPR018392 LysM domain YP_RS14405 IPR023346 Lysozyme-like domain YP_RS14410 IPR005135 Endonuclease/exonuclease/phosphatase YP_RS14420 IPR001395 Aldo/keto reductase YP_RS14420 IPR018170 Aldo/keto reductase, conserved site YP_RS14420 IPR020471 Aldo/keto reductase subgroup YP_RS14420 IPR023210 NADP-dependent oxidoreductase domain YP_RS14455 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YP_RS14455 IPR006543 Histidinol-phosphate phosphatase YP_RS14455 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YP_RS14455 IPR023214 HAD-like domain YP_RS14460 IPR003439 ABC transporter-like YP_RS14460 IPR003593 AAA+ ATPase domain YP_RS14460 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YP_RS14460 IPR017871 ABC transporter, conserved site YP_RS14460 IPR018449 NIL domain YP_RS14460 IPR026253 Methionine import ATP-binding protein MetN YP_RS14460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14465 IPR000515 MetI-like domain YP_RS14470 IPR004872 Lipoprotein NlpA family YP_RS14475 IPR030852 YP_RS14475 YP_RS14480 IPR023368 Uncharacterised protein family UPF0066, conserved site YP_RS14480 IPR023370 TsaA-like domain YP_RS14485 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YP_RS14485 IPR002316 Proline-tRNA ligase, class IIa YP_RS14485 IPR004154 Anticodon-binding YP_RS14485 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YP_RS14485 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YP_RS14485 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YP_RS14490 IPR007298 Copper resistance lipoprotein NlpE YP_RS14490 IPR033450 YP_RS14490 YP_RS14495 IPR000352 Peptide chain release factor class I/class II YP_RS14500 IPR009822 YaeQ YP_RS14500 IPR011335 Restriction endonuclease type II-like YP_RS14505 IPR009624 Uncharacterised protein family UPF0253 YP_RS14510 IPR009778 Modulator of Rho-dependent transcription termination YP_RS14510 IPR023534 Rof/RNase P-like YP_RS14515 IPR008168 Cytochrome c, class IC YP_RS14515 IPR009056 Cytochrome c-like domain YP_RS14520 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YP_RS14520 IPR012094 Lysidine-tRNA(Ile) synthetase YP_RS14520 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal YP_RS14520 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YP_RS14520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS14520 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain YP_RS14520 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YP_RS14525 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YP_RS14525 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YP_RS14530 IPR001095 Acetyl-CoA carboxylase, alpha subunit YP_RS14530 IPR029045 ClpP/crotonase-like domain YP_RS14535 IPR003141 Polymerase/histidinol phosphatase, N-terminal YP_RS14535 IPR004013 PHP, C-terminal YP_RS14535 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YP_RS14535 IPR004805 DNA polymerase III, alpha subunit YP_RS14535 IPR011708 Bacterial DNA polymerase III, alpha subunit YP_RS14535 IPR012340 Nucleic acid-binding, OB-fold YP_RS14535 IPR016195 Polymerase/histidinol phosphatase-like YP_RS14535 IPR029460 DNA polymerase, helix-hairpin-helix motif YP_RS14540 IPR001352 Ribonuclease HII/HIII YP_RS14540 IPR012337 Ribonuclease H-like domain YP_RS14540 IPR022898 Ribonuclease HII YP_RS14540 IPR024567 Ribonuclease HII/HIII domain YP_RS14545 IPR003835 Glycosyl transferase, family 19 YP_RS14550 IPR001451 Bacterial transferase hexapeptide repeat YP_RS14550 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_RS14550 IPR011004 Trimeric LpxA-like YP_RS14550 IPR018357 Hexapeptide transferase, conserved site YP_RS14550 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal YP_RS14555 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_RS14555 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YP_RS14555 IPR029069 HotDog domain YP_RS14560 IPR001451 Bacterial transferase hexapeptide repeat YP_RS14560 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_RS14560 IPR011004 Trimeric LpxA-like YP_RS14560 IPR018357 Hexapeptide transferase, conserved site YP_RS14560 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YP_RS14565 IPR005632 Chaperone protein Skp YP_RS14565 IPR024930 Skp domain YP_RS14570 IPR000184 Bacterial surface antigen (D15) YP_RS14570 IPR010827 Surface antigen variable number YP_RS14570 IPR023707 Outer membrane protein assembly factor BamA YP_RS14575 IPR001478 PDZ domain YP_RS14575 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YP_RS14575 IPR008915 Peptidase M50 YP_RS14580 IPR000374 Phosphatidate cytidylyltransferase YP_RS14585 IPR001441 Decaprenyl diphosphate synthase-like YP_RS14585 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YP_RS14590 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_RS14590 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YP_RS14590 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YP_RS14590 IPR016040 NAD(P)-binding domain YP_RS14590 IPR026877 DXP reductoisomerase C-terminal domain YP_RS14595 IPR002661 Ribosome recycling factor YP_RS14595 IPR023584 Ribosome recycling factor domain YP_RS14600 IPR001048 Aspartate/glutamate/uridylate kinase YP_RS14600 IPR011817 Uridylate kinase YP_RS14600 IPR015963 Uridylate kinase, bacteria YP_RS14605 IPR001816 Translation elongation factor EFTs/EF1B YP_RS14605 IPR009060 UBA-like YP_RS14605 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YP_RS14605 IPR018101 Translation elongation factor Ts, conserved site YP_RS14610 IPR001865 Ribosomal protein S2 YP_RS14610 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YP_RS14610 IPR018130 Ribosomal protein S2, conserved site YP_RS14610 IPR023591 Ribosomal protein S2, flavodoxin-like domain YP_RS14615 IPR000994 Peptidase M24, structural domain YP_RS14615 IPR001714 Peptidase M24, methionine aminopeptidase YP_RS14615 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YP_RS14620 IPR002912 ACT domain YP_RS14620 IPR002934 Nucleotidyl transferase domain YP_RS14620 IPR003607 HD/PDEase domain YP_RS14620 IPR006674 HD domain YP_RS14620 IPR010043 Protein-PII uridylyltransferase YP_RS14620 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YP_RS14625 IPR001451 Bacterial transferase hexapeptide repeat YP_RS14625 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YP_RS14625 IPR011004 Trimeric LpxA-like YP_RS14625 IPR018357 Hexapeptide transferase, conserved site YP_RS14625 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YP_RS14630 IPR020911 Uncharacterised protein family UPF0325 YP_RS14635 IPR001094 Flavodoxin YP_RS14635 IPR008254 Flavodoxin/nitric oxide synthase YP_RS14635 IPR029039 Flavoprotein-like YP_RS14640 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YP_RS14640 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YP_RS14640 IPR020103 Pseudouridine synthase, catalytic domain YP_RS14645 IPR007384 Protein of unknown function UCP006257 YP_RS14645 IPR023376 YqcC-like domain YP_RS14650 IPR002686 Transposase IS200-like YP_RS14655 IPR009948 Syd YP_RS14660 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YP_RS14660 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YP_RS14660 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YP_RS14665 IPR021826 Protein of unknown function DUF3412 YP_RS14665 IPR027820 Domain of unknown function DUF4478 YP_RS14665 IPR031100 YP_RS14665 YP_RS14670 IPR002421 5'-3' exonuclease, N-terminal YP_RS14670 IPR008918 Helix-hairpin-helix motif, class 2 YP_RS14670 IPR020045 5'-3' exonuclease, C-terminal domain YP_RS14670 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YP_RS14670 IPR022895 Flap endonuclease Xni YP_RS14670 IPR029060 PIN domain-like YP_RS14675 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YP_RS14675 IPR011224 Ribosomal RNA large subunit methyltransferase M YP_RS14675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS14680 IPR006696 Protein of unknown function DUF423 YP_RS14685 IPR000847 Transcription regulator HTH, LysR YP_RS14685 IPR005119 LysR, substrate-binding YP_RS14685 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS14690 IPR000192 Aminotransferase class V domain YP_RS14690 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS14690 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS14690 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS14690 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YP_RS14690 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YP_RS14695 IPR003808 Fe-S metabolism associated domain, SufE-like YP_RS14695 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YP_RS14700 IPR000594 UBA/THIF-type NAD/FAD binding fold YP_RS14700 IPR016040 NAD(P)-binding domain YP_RS14705 IPR005300 Lytic transglycosylase MltA YP_RS14705 IPR009009 RlpA-like double-psi beta-barrel domain YP_RS14705 IPR010611 3D domain YP_RS14705 IPR026044 Membrane-bound lytic murein transglycosylase A YP_RS14720 IPR002508 Cell wall hydrolase/autolysin, catalytic YP_RS14720 IPR021731 AMIN domain YP_RS14725 IPR000182 GNAT domain YP_RS14725 IPR001048 Aspartate/glutamate/uridylate kinase YP_RS14725 IPR010167 Amino-acid N-acetyltransferase (ArgA) YP_RS14725 IPR016181 Acyl-CoA N-acyltransferase YP_RS14730 IPR001584 Integrase, catalytic core YP_RS14730 IPR006120 Resolvase, HTH domain YP_RS14730 IPR009057 Homeodomain-like YP_RS14730 IPR012337 Ribonuclease H-like domain YP_RS14735 IPR001270 ClpA/B family YP_RS14735 IPR002611 IstB-like ATP-binding protein YP_RS14735 IPR003593 AAA+ ATPase domain YP_RS14735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14735 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS14740 IPR003159 Polysaccharide lyase family 8, central domain YP_RS14740 IPR004103 Polysaccharide lyase family 8, C-terminal YP_RS14740 IPR008929 Chondroitin AC/alginate lyase YP_RS14740 IPR008979 Galactose-binding domain-like YP_RS14740 IPR011013 Galactose mutarotase-like domain YP_RS14740 IPR011071 Polysaccharide lyase family 8-like, C-terminal YP_RS14740 IPR012329 Polysaccharide lyase family 8, N-terminal YP_RS14740 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YP_RS14740 IPR015176 Lyase, N-terminal YP_RS14740 IPR015177 Lyase, catalytic YP_RS14740 IPR024200 Chondroitin sulfate ABC endolyase YP_RS14745 IPR005546 Autotransporter beta-domain YP_RS14745 IPR006315 Outer membrane autotransporter barrel YP_RS14750 IPR031605 YP_RS14750 YP_RS14765 IPR001765 Carbonic anhydrase YP_RS14765 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YP_RS14770 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS14770 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS14775 IPR024961 YP_RS14775 YP_RS14780 IPR001775 GspD/PilQ family YP_RS14780 IPR004845 Type II secretion system GspD, conserved site YP_RS14780 IPR004846 Type II/III secretion system YP_RS14780 IPR005644 NolW-like YP_RS14780 IPR013356 Type II secretion system GspD YP_RS14785 IPR001482 Type II secretion system protein E YP_RS14785 IPR003593 AAA+ ATPase domain YP_RS14785 IPR013369 Type II secretion system GspE YP_RS14785 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14790 IPR001992 Type II secretion system conserved site YP_RS14790 IPR003004 GspF/PilC family YP_RS14790 IPR018076 Type II secretion system F domain YP_RS14795 IPR000983 Bacterial general secretion pathway protein G-type pilin YP_RS14795 IPR010054 General secretion pathway protein G YP_RS14795 IPR012902 Prokaryotic N-terminal methylation site YP_RS14795 IPR013545 Type II secretion system protein G YP_RS14800 IPR002416 Type II secretion system protein H YP_RS14800 IPR012902 Prokaryotic N-terminal methylation site YP_RS14800 IPR022346 General secretion pathway, GspH YP_RS14805 IPR003413 Type II secretion system protein I domain YP_RS14810 IPR010055 Type II secretion system protein J YP_RS14810 IPR012902 Prokaryotic N-terminal methylation site YP_RS14815 IPR005628 General secretion pathway protein K YP_RS14820 IPR007812 Type II secretion system protein L YP_RS14820 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YP_RS14820 IPR025691 GspL periplasmic domain YP_RS14830 IPR000045 Prepilin type IV endopeptidase, peptidase domain YP_RS14830 IPR010627 Peptidase A24A, N-terminal YP_RS14830 IPR014032 Peptidase A24A, prepilin type IV, bacterial YP_RS14835 IPR019114 Chaperone lipoprotein, PulS/OutS-like YP_RS14840 IPR001867 Signal transduction response regulator, C-terminal YP_RS14840 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS14840 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS14845 IPR001207 Transposase, mutator type YP_RS14860 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YP_RS14860 IPR003660 HAMP linker domain YP_RS14860 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YP_RS14860 IPR004090 Chemotaxis methyl-accepting receptor YP_RS14865 IPR001853 DSBA-like thioredoxin domain YP_RS14865 IPR012336 Thioredoxin-like fold YP_RS14865 IPR023169 UPF0413, central domain YP_RS14870 IPR001279 Beta-lactamase-like YP_RS14875 IPR000847 Transcription regulator HTH, LysR YP_RS14875 IPR005119 LysR, substrate-binding YP_RS14875 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS14880 IPR011701 Major facilitator superfamily YP_RS14880 IPR020846 Major facilitator superfamily domain YP_RS14885 IPR000847 Transcription regulator HTH, LysR YP_RS14885 IPR005119 LysR, substrate-binding YP_RS14885 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS14890 IPR000183 Ornithine/DAP/Arg decarboxylase YP_RS14890 IPR002986 Diaminopimelate decarboxylase, LysA YP_RS14890 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YP_RS14890 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YP_RS14890 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YP_RS14890 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YP_RS14890 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YP_RS14890 IPR029066 PLP-binding barrel YP_RS14895 IPR000843 Transcription regulator HTH, LacI YP_RS14895 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS14895 IPR028082 Periplasmic binding protein-like I YP_RS14900 IPR006656 Molybdopterin oxidoreductase YP_RS14900 IPR006657 Molydopterin dinucleotide-binding domain YP_RS14900 IPR009010 Aspartate decarboxylase-like domain YP_RS14905 IPR000873 AMP-dependent synthetase/ligase YP_RS14905 IPR002123 Phospholipid/glycerol acyltransferase YP_RS14905 IPR020845 AMP-binding, conserved site YP_RS14905 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas YP_RS14910 IPR011701 Major facilitator superfamily YP_RS14910 IPR020846 Major facilitator superfamily domain YP_RS14910 IPR023727 Lysophospholipid transporter LplT YP_RS14925 IPR001395 Aldo/keto reductase YP_RS14925 IPR023210 NADP-dependent oxidoreductase domain YP_RS14930 IPR004230 DNA mismatch repair protein MutH YP_RS14930 IPR011335 Restriction endonuclease type II-like YP_RS14930 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YP_RS14945 IPR000086 NUDIX hydrolase domain YP_RS14945 IPR015797 NUDIX hydrolase domain-like YP_RS14945 IPR020084 NUDIX hydrolase, conserved site YP_RS14945 IPR020476 NUDIX hydrolase YP_RS14945 IPR022927 RNA pyrophosphohydrolase RppH YP_RS14950 IPR000121 PEP-utilising enzyme, C-terminal YP_RS14950 IPR003018 GAF domain YP_RS14950 IPR006318 Phosphoenolpyruvate-utilising enzyme YP_RS14950 IPR008279 PEP-utilising enzyme, mobile domain YP_RS14950 IPR008731 Phosphotransferase system, enzyme I N-terminal YP_RS14950 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS14950 IPR018274 PEP-utilising enzyme, active site YP_RS14950 IPR023151 PEP-utilising enzyme, conserved site YP_RS14950 IPR029016 GAF domain-like YP_RS14955 IPR001640 Prolipoprotein diacylglyceryl transferase YP_RS14960 IPR000398 Thymidylate synthase YP_RS14960 IPR020940 Thymidylate synthase, active site YP_RS14960 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YP_RS14970 IPR012902 Prokaryotic N-terminal methylation site YP_RS14975 IPR012902 Prokaryotic N-terminal methylation site YP_RS14975 IPR016419 Prepilin peptidase-dependent protein B, predicted YP_RS14980 IPR019652 Protein of unknown function DUF2509 YP_RS14985 IPR012902 Prokaryotic N-terminal methylation site YP_RS14985 IPR022204 Prepilin peptidase dependent protein C YP_RS14990 IPR006697 Exodeoxyribonuclease V, gamma subunit YP_RS14990 IPR011335 Restriction endonuclease type II-like YP_RS14990 IPR013986 DExx box DNA helicase domain YP_RS14990 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS14995 IPR001431 Peptidase M16, zinc-binding site YP_RS14995 IPR007863 Peptidase M16, C-terminal domain YP_RS14995 IPR011237 Peptidase M16 domain YP_RS14995 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YP_RS14995 IPR011765 Peptidase M16, N-terminal YP_RS14995 IPR032632 YP_RS14995 YP_RS15000 IPR000212 DNA helicase, UvrD/REP type YP_RS15000 IPR004586 Exodeoxyribonuclease V, beta subunit YP_RS15000 IPR011335 Restriction endonuclease type II-like YP_RS15000 IPR011604 Exonuclease, phage-type/RecB, C-terminal YP_RS15000 IPR014016 UvrD-like Helicase, ATP-binding domain YP_RS15000 IPR014017 DNA helicase, UvrD-like, C-terminal YP_RS15000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15005 IPR006344 Exodeoxyribonuclease V, alpha subunit YP_RS15005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15005 IPR027785 UvrD-like helicase C-terminal domain YP_RS15010 IPR001270 ClpA/B family YP_RS15010 IPR002611 IstB-like ATP-binding protein YP_RS15010 IPR003593 AAA+ ATPase domain YP_RS15010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15010 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS15015 IPR001584 Integrase, catalytic core YP_RS15015 IPR006120 Resolvase, HTH domain YP_RS15015 IPR009057 Homeodomain-like YP_RS15015 IPR012337 Ribonuclease H-like domain YP_RS15025 IPR032808 YP_RS15025 YP_RS15030 IPR025612 YqjK-like protein YP_RS15035 IPR009937 Protein of unknown function DUF1469 YP_RS15040 IPR010279 Protein of unknown function DUF883, ElaB YP_RS15050 IPR009468 Protein of unknown function DUF1090 YP_RS15055 IPR026574 Modulator protein MzrA YP_RS15055 IPR027398 SecD export protein N-terminal TM domain YP_RS15060 IPR032816 YP_RS15060 YP_RS15060 IPR032818 YP_RS15060 YP_RS15070 IPR000524 Transcription regulator HTH, GntR YP_RS15070 IPR008920 Transcription regulator FadR/GntR, C-terminal YP_RS15070 IPR011711 GntR, C-terminal YP_RS15070 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS15075 IPR000849 Sugar phosphate transporter YP_RS15075 IPR011701 Major facilitator superfamily YP_RS15075 IPR020846 Major facilitator superfamily domain YP_RS15085 IPR003766 Uronate isomerase YP_RS15085 IPR023177 Uronate isomerase, domain 2 YP_RS15085 IPR032466 YP_RS15085 YP_RS15090 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS15090 IPR013118 Mannitol dehydrogenase, C-terminal YP_RS15090 IPR013131 Mannitol dehydrogenase, N-terminal YP_RS15090 IPR013328 Dehydrogenase, multihelical YP_RS15090 IPR016040 NAD(P)-binding domain YP_RS15090 IPR023668 Altronate oxidoreductase YP_RS15095 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal YP_RS15095 IPR013974 SAF domain YP_RS15100 IPR019629 Uncharacterised protein family HI1736/YgjV YP_RS15100 IPR026267 Inner membrane protein YgjV YP_RS15105 IPR002686 Transposase IS200-like YP_RS15110 IPR001991 Sodium:dicarboxylate symporter YP_RS15110 IPR023025 Serine/threonine transporter SstT YP_RS15115 IPR000683 Oxidoreductase, N-terminal YP_RS15115 IPR016040 NAD(P)-binding domain YP_RS15120 IPR002725 Protein of unknown function DUF45 YP_RS15125 IPR004899 Pertactin, central region YP_RS15125 IPR005546 Autotransporter beta-domain YP_RS15125 IPR006315 Outer membrane autotransporter barrel YP_RS15125 IPR011050 Pectin lyase fold/virulence factor YP_RS15125 IPR012332 P22 tailspike C-terminal domain-like YP_RS15130 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS15130 IPR007848 Methyltransferase small domain YP_RS15130 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YP_RS15130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS15135 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_RS15135 IPR013785 Aldolase-type TIM barrel YP_RS15135 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS15140 IPR005325 Protein of unknown function DUF308, membrane YP_RS15150 IPR000719 Protein kinase domain YP_RS15150 IPR008266 Tyrosine-protein kinase, active site YP_RS15150 IPR011009 Protein kinase-like domain YP_RS15155 IPR001932 Protein phosphatase 2C (PP2C)-like domain YP_RS15160 IPR002035 von Willebrand factor, type A YP_RS15160 IPR028274 TerY-C metal binding domain YP_RS15165 IPR002035 von Willebrand factor, type A YP_RS15165 IPR011392 Tellurite resistance, TerY YP_RS15170 IPR003325 TerD domain YP_RS15175 IPR002035 von Willebrand factor, type A YP_RS15175 IPR011392 Tellurite resistance, TerY YP_RS15180 IPR005565 Haemolysin activator HlyB YP_RS15180 IPR013686 Polypeptide-transport-associated, ShlB-type YP_RS15180 IPR027282 Two partner secretion pathway transporter YP_RS15185 IPR006914 VENN motif-containing domain YP_RS15185 IPR008638 Filamentous haemagglutinin, N-terminal YP_RS15185 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YP_RS15185 IPR011050 Pectin lyase fold/virulence factor YP_RS15185 IPR012334 Pectin lyase fold YP_RS15185 IPR024973 ESPR domain YP_RS15185 IPR025157 Haemagluttinin repeat YP_RS15195 IPR025157 Haemagluttinin repeat YP_RS15205 IPR028952 Immunity protein 38 YP_RS15220 IPR005546 Autotransporter beta-domain YP_RS15225 IPR025737 MetA-pathway of phenol degradation, putative YP_RS15230 IPR019282 Domain of unknown function DUF2329 YP_RS15235 IPR003439 ABC transporter-like YP_RS15235 IPR003593 AAA+ ATPase domain YP_RS15235 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS15235 IPR012340 Nucleic acid-binding, OB-fold YP_RS15235 IPR013611 Transport-associated OB, type 2 YP_RS15235 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15240 IPR008928 Six-hairpin glycosidase-like YP_RS15245 IPR000843 Transcription regulator HTH, LacI YP_RS15245 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS15245 IPR028082 Periplasmic binding protein-like I YP_RS15250 IPR006059 Bacterial extracellular solute-binding, family 1 YP_RS15255 IPR000515 MetI-like domain YP_RS15260 IPR000515 MetI-like domain YP_RS15270 IPR001764 Glycoside hydrolase, family 3, N-terminal YP_RS15270 IPR002772 Glycoside hydrolase family 3 C-terminal domain YP_RS15270 IPR017853 Glycoside hydrolase, superfamily YP_RS15270 IPR026891 Fibronectin type III-like domain YP_RS15270 IPR026892 Glycoside hydrolase family 3 YP_RS15275 IPR003423 Outer membrane efflux protein YP_RS15275 IPR028351 Cyclolysin transport protein CyaE YP_RS15280 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YP_RS15285 IPR030196 YP_RS15285 YP_RS15290 IPR031381 YP_RS15290 YP_RS15305 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YP_RS15305 IPR004839 Aminotransferase, class I/classII YP_RS15305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS15305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS15305 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS15310 IPR018461 Na+/H+ antiporter, NhaC-like YP_RS15315 IPR019587 Polyketide cyclase/dehydrase YP_RS15315 IPR023393 START-like domain YP_RS15320 IPR013559 YheO-like YP_RS15325 IPR006056 Enamine/imine deaminase YjgF-like YP_RS15325 IPR006175 YjgF/Yer057p/UK114 family YP_RS15325 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YP_RS15325 IPR019897 YjgF-like protein, conserved site YP_RS15330 IPR006175 YjgF/Yer057p/UK114 family YP_RS15330 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YP_RS15335 IPR011008 Dimeric alpha-beta barrel YP_RS15335 IPR014910 Mono-oxygenase, YdhR YP_RS15340 IPR012336 Thioredoxin-like fold YP_RS15340 IPR023169 UPF0413, central domain YP_RS15345 IPR000847 Transcription regulator HTH, LysR YP_RS15345 IPR005119 LysR, substrate-binding YP_RS15345 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS15350 IPR003812 Fido domain YP_RS15355 IPR003812 Fido domain YP_RS15375 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type YP_RS15380 IPR018958 SMI1/KNR4 like domain YP_RS15395 IPR001207 Transposase, mutator type YP_RS15415 IPR000943 RNA polymerase sigma-70 YP_RS15415 IPR007127 RNA polymerase sigma factor 70, region 1.1 YP_RS15415 IPR007624 RNA polymerase sigma-70 region 3 YP_RS15415 IPR007627 RNA polymerase sigma-70 region 2 YP_RS15415 IPR007630 RNA polymerase sigma-70 region 4 YP_RS15415 IPR007631 RNA polymerase sigma factor 70, non-essential domain YP_RS15415 IPR009042 RNA polymerase sigma-70 region 1.2 YP_RS15415 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS15415 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YP_RS15415 IPR013324 RNA polymerase sigma factor, region 3/4 YP_RS15415 IPR013325 RNA polymerase sigma factor, region 2 YP_RS15415 IPR014284 RNA polymerase sigma-70 like domain YP_RS15415 IPR028630 RNA polymerase sigma factor RpoD YP_RS15420 IPR002694 Zinc finger, CHC2-type YP_RS15420 IPR006171 Toprim domain YP_RS15420 IPR006295 DNA primase, DnaG YP_RS15420 IPR013173 DNA primase DnaG, DnaB-binding domain YP_RS15420 IPR013264 DNA primase, catalytic core, N-terminal YP_RS15420 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YP_RS15420 IPR019475 DNA primase, DnaB-helicase binding domain YP_RS15420 IPR030846 YP_RS15420 YP_RS15425 IPR001911 Ribosomal protein S21 YP_RS15425 IPR018278 Ribosomal protein S21, conserved site YP_RS15430 IPR000905 Gcp-like domain YP_RS15430 IPR017860 Peptidase M22, conserved site YP_RS15430 IPR017861 Kae1/YgjD family YP_RS15430 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YP_RS15435 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YP_RS15440 IPR006156 Dihydroneopterin aldolase YP_RS15440 IPR006157 Dihydroneopterin aldolase/epimerase domain YP_RS15445 IPR003824 Undecaprenyl-diphosphatase UppP YP_RS15450 IPR002646 Poly A polymerase, head domain YP_RS15450 IPR003607 HD/PDEase domain YP_RS15450 IPR006674 HD domain YP_RS15450 IPR012006 tRNA nucleotidyltransferase, proteobacteria YP_RS15450 IPR032828 YP_RS15450 YP_RS15455 IPR003646 SH3-like domain, bacterial-type YP_RS15455 IPR016476 SH3 domain protein YP_RS15460 IPR023577 CYTH-like domain YP_RS15460 IPR033469 YP_RS15460 YP_RS15465 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YP_RS15465 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YP_RS15465 IPR023057 Glutamate-ammonia-ligase adenylyltransferase YP_RS15470 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YP_RS15470 IPR004821 Cytidyltransferase-like domain YP_RS15470 IPR011611 Carbohydrate kinase PfkB YP_RS15470 IPR011913 RfaE bifunctional protein, domain I YP_RS15470 IPR011914 RfaE bifunctional protein, domain II YP_RS15470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS15470 IPR023030 Bifunctional protein HldE YP_RS15470 IPR029056 Ribokinase-like YP_RS15475 IPR002293 Amino acid/polyamine transporter I YP_RS15480 IPR007475 Membrane fusogenic activity YP_RS15490 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YP_RS15490 IPR017945 DHBP synthase RibB-like alpha/beta domain YP_RS15495 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_RS15495 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type YP_RS15500 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YP_RS15500 IPR016185 Pre-ATP-grasp domain YP_RS15505 IPR009576 Biofilm formation YgiB YP_RS15515 IPR003423 Outer membrane efflux protein YP_RS15515 IPR010130 Type I secretion outer membrane protein, TolC YP_RS15520 IPR000086 NUDIX hydrolase domain YP_RS15520 IPR004385 Nucleoside diphosphate pyrophosphatase YP_RS15520 IPR015797 NUDIX hydrolase domain-like YP_RS15520 IPR020084 NUDIX hydrolase, conserved site YP_RS15525 IPR009659 Protein of unknown function DUF1249 YP_RS15530 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YP_RS15530 IPR013622 Calcineurin-like phosphoesterase C-terminal YP_RS15530 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA YP_RS15530 IPR029052 Metallo-dependent phosphatase-like YP_RS15535 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YP_RS15535 IPR029058 Alpha/Beta hydrolase fold YP_RS15540 IPR001241 DNA topoisomerase, type IIA YP_RS15540 IPR002288 DNA gyrase B subunit, C-terminal YP_RS15540 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS15540 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YP_RS15540 IPR006171 Toprim domain YP_RS15540 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YP_RS15540 IPR013759 DNA topoisomerase, type IIA, central domain YP_RS15540 IPR013760 DNA topoisomerase, type IIA-like domain YP_RS15540 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS15540 IPR018522 DNA topoisomerase, type IIA, conserved site YP_RS15540 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS15545 IPR000847 Transcription regulator HTH, LysR YP_RS15545 IPR005119 LysR, substrate-binding YP_RS15545 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS15550 IPR003680 Flavodoxin-like fold YP_RS15550 IPR029039 Flavoprotein-like YP_RS15555 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YP_RS15555 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YP_RS15555 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YP_RS15555 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YP_RS15555 IPR013760 DNA topoisomerase, type IIA-like domain YP_RS15555 IPR024946 Arginine repressor C-terminal-like domain YP_RS15560 IPR002123 Phospholipid/glycerol acyltransferase YP_RS15560 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_RS15565 IPR008972 Cupredoxin YP_RS15565 IPR011706 Multicopper oxidase, type 2 YP_RS15565 IPR011707 Multicopper oxidase, type 3 YP_RS15565 IPR026589 Cell division protein FtsP YP_RS15575 IPR001395 Aldo/keto reductase YP_RS15575 IPR018170 Aldo/keto reductase, conserved site YP_RS15575 IPR020471 Aldo/keto reductase subgroup YP_RS15575 IPR023210 NADP-dependent oxidoreductase domain YP_RS15585 IPR001670 Alcohol dehydrogenase, iron-type YP_RS15585 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YP_RS15590 IPR009057 Homeodomain-like YP_RS15590 IPR009594 Transcription regulator HTH, AraC, N-terminal YP_RS15590 IPR018060 DNA binding HTH domain, AraC-type YP_RS15595 IPR032816 YP_RS15595 YP_RS15595 IPR032818 YP_RS15595 YP_RS15600 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_RS15600 IPR006233 Cystathionine beta-lyase, bacterial YP_RS15600 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS15600 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS15600 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS15605 IPR002898 MotA/TolQ/ExbB proton channel YP_RS15605 IPR014164 TonB-system energizer ExbB type-1 YP_RS15610 IPR003400 Biopolymer transport protein ExbD/TolR YP_RS15610 IPR014170 TonB system transport protein ExbD type-1 YP_RS15615 IPR002035 von Willebrand factor, type A YP_RS15620 IPR031582 YP_RS15620 YP_RS15625 IPR012495 TadE-like YP_RS15630 IPR011990 Tetratricopeptide-like helical domain YP_RS15635 IPR018076 Type II secretion system F domain YP_RS15640 IPR018076 Type II secretion system F domain YP_RS15645 IPR001482 Type II secretion system protein E YP_RS15645 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15660 IPR004846 Type II/III secretion system YP_RS15665 IPR032789 YP_RS15665 YP_RS15675 IPR000045 Prepilin type IV endopeptidase, peptidase domain YP_RS15680 IPR002686 Transposase IS200-like YP_RS15690 IPR001829 Pili assembly chaperone, bacterial YP_RS15690 IPR008962 PapD-like YP_RS15690 IPR016147 PapD, N-terminal, bacterial YP_RS15690 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS15690 IPR018046 Pili assembly chaperone, conserved site YP_RS15695 IPR000259 Fimbrial-type adhesion domain YP_RS15695 IPR008966 Adhesion domain YP_RS15700 IPR002491 ABC transporter periplasmic binding domain YP_RS15710 IPR021326 Protein of unknown function DUF2931 YP_RS15720 IPR006135 Type III secretion system substrate exporter YP_RS15720 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YP_RS15720 IPR029025 Type III secretion system substrate exporter, C-terminal YP_RS15725 IPR002010 Type III secretion system inner membrane R protein YP_RS15730 IPR002191 Bacterial export protein family 3 YP_RS15730 IPR006305 Flagellar biosynthesis protein FliQ YP_RS15735 IPR005837 Flagellar transport protein FliP YP_RS15735 IPR005838 Type III secretion system inner membrane P protein YP_RS15740 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YP_RS15740 IPR001543 Surface presentation of antigen (SpoA) YP_RS15740 IPR012826 Flagellar motor switch FliN YP_RS15745 IPR001543 Surface presentation of antigen (SpoA) YP_RS15750 IPR002078 RNA polymerase sigma factor 54 interaction domain YP_RS15750 IPR002197 DNA binding HTH domain, Fis-type YP_RS15750 IPR003593 AAA+ ATPase domain YP_RS15750 IPR009057 Homeodomain-like YP_RS15750 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YP_RS15750 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YP_RS15750 IPR025944 Sigma-54 interaction domain, conserved site YP_RS15750 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15750 IPR029995 YP_RS15750 YP_RS15755 IPR001624 Flagellar hook-basal body complex protein FliE YP_RS15760 IPR000067 Flagellar M-ring protein FliF YP_RS15760 IPR006182 Secretory protein YscJ/FliF YP_RS15760 IPR013556 Flagellar M-ring C-terminal YP_RS15765 IPR000090 Flagellar motor switch protein FliG YP_RS15765 IPR011002 Flagellar motor switch protein FliG, alpha-helical YP_RS15765 IPR023087 YP_RS15765 YP_RS15765 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YP_RS15765 IPR032779 YP_RS15765 YP_RS15770 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YP_RS15770 IPR019191 Essential protein Yae1, N-terminal YP_RS15775 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YP_RS15775 IPR003593 AAA+ ATPase domain YP_RS15775 IPR005714 ATPase, type III secretion system, FliI/YscN YP_RS15775 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YP_RS15775 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS15775 IPR032463 YP_RS15775 YP_RS15780 IPR012823 Flagellar export FliJ YP_RS15785 IPR007809 FlgN-like domain YP_RS15790 IPR007412 Anti-sigma-28 factor, FlgM YP_RS15790 IPR031316 YP_RS15790 YP_RS15795 IPR013974 SAF domain YP_RS15795 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YP_RS15800 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS15800 IPR006300 Flagellar basal-body rod protein FlgB YP_RS15800 IPR019776 Flagellar basal body rod protein, conserved site YP_RS15805 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS15805 IPR006299 Flagellar basal-body rod protein FlgC YP_RS15805 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS15805 IPR019776 Flagellar basal body rod protein, conserved site YP_RS15810 IPR005648 Flagellar hook capping protein YP_RS15810 IPR025963 FlgD Tudor-like domain YP_RS15810 IPR025965 FlgD Ig-like domain YP_RS15815 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS15815 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS15815 IPR011491 Flagellar basal body FlaE YP_RS15815 IPR019776 Flagellar basal body rod protein, conserved site YP_RS15815 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YP_RS15820 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS15820 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS15820 IPR012836 Flagellar basal-body rod FlgF YP_RS15820 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YP_RS15825 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS15825 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS15825 IPR012834 Flagellar basal-body rod FlgG YP_RS15825 IPR019776 Flagellar basal body rod protein, conserved site YP_RS15825 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YP_RS15830 IPR000527 Flagellar L-ring protein YP_RS15835 IPR001782 Flagellar P-ring protein YP_RS15840 IPR019301 Flagellar protein FlgJ, N-terminal YP_RS15845 IPR001444 Flagellar basal body rod protein, N-terminal YP_RS15845 IPR002371 Flagellar hook-associated protein, FlgK YP_RS15845 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YP_RS15865 IPR001867 Signal transduction response regulator, C-terminal YP_RS15865 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS15865 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS15875 IPR003481 Flagellar hook-associated protein 2, N-terminal YP_RS15875 IPR010809 Flagellar hook-associated 2, C-terminal YP_RS15875 IPR010810 Flagellin hook, IN motif YP_RS15880 IPR003713 Flagellar protein FliS YP_RS15890 IPR011004 Trimeric LpxA-like YP_RS15890 IPR018357 Hexapeptide transferase, conserved site YP_RS15890 IPR021136 Flagellar hook-length control protein-like, C-terminal YP_RS15895 IPR005503 Flagellar basal body-associated protein FliL YP_RS15900 IPR000943 RNA polymerase sigma-70 YP_RS15900 IPR007624 RNA polymerase sigma-70 region 3 YP_RS15900 IPR007627 RNA polymerase sigma-70 region 2 YP_RS15900 IPR007630 RNA polymerase sigma-70 region 4 YP_RS15900 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS15900 IPR012845 RNA polymerase sigma factor, FliA/WhiG YP_RS15900 IPR013324 RNA polymerase sigma factor, region 3/4 YP_RS15900 IPR013325 RNA polymerase sigma factor, region 2 YP_RS15900 IPR014284 RNA polymerase sigma-70 like domain YP_RS15905 IPR000540 Flagellar motor protein MotA, conserved site YP_RS15905 IPR002898 MotA/TolQ/ExbB proton channel YP_RS15905 IPR022522 Flagellar motor stator, MotA YP_RS15910 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS15910 IPR025713 Motility protein B, N-terminal domain YP_RS15930 IPR008523 Lactobacillus phage LBR48, DUF805 YP_RS15940 IPR022553 Protein of unknown function DUF2645 YP_RS15945 IPR009057 Homeodomain-like YP_RS15945 IPR010921 Trp repressor/replication initiator YP_RS15945 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS15950 IPR001584 Integrase, catalytic core YP_RS15950 IPR012337 Ribonuclease H-like domain YP_RS15950 IPR025948 HTH-like domain YP_RS15955 IPR010272 Type VI secretion system, VCA0110 YP_RS15960 IPR007048 GpW/Gp25/anti-adapter protein IraD YP_RS15960 IPR017737 Type VI secretion system, lysozyme-related protein YP_RS15965 IPR010269 Protein of unknown function DUF877 YP_RS15970 IPR008312 Uncharacterised conserved protein UCP028301 YP_RS15975 IPR008514 Type VI secretion system effector, Hcp YP_RS15985 IPR010794 Maltose operon periplasmic YP_RS15990 IPR003192 Porin, LamB type YP_RS15990 IPR023738 Maltoporin YP_RS15995 IPR003439 ABC transporter-like YP_RS15995 IPR003593 AAA+ ATPase domain YP_RS15995 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS15995 IPR012340 Nucleic acid-binding, OB-fold YP_RS15995 IPR013611 Transport-associated OB, type 2 YP_RS15995 IPR017871 ABC transporter, conserved site YP_RS15995 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16005 IPR006060 Maltose binding protein YP_RS16005 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YP_RS16010 IPR000515 MetI-like domain YP_RS16010 IPR029345 Maltose transport system permease protein MalF, P2 domain YP_RS16015 IPR000515 MetI-like domain YP_RS16020 IPR009315 Phosphate-starvation-induced PsiE YP_RS16020 IPR020948 Phosphate-starvation-induced PsiE-like YP_RS16025 IPR001672 Phosphoglucose isomerase (PGI) YP_RS16025 IPR018189 Phosphoglucose isomerase, conserved site YP_RS16025 IPR023096 Phosphoglucose isomerase, C-terminal YP_RS16030 IPR001048 Aspartate/glutamate/uridylate kinase YP_RS16030 IPR001341 Aspartate kinase domain YP_RS16030 IPR005260 Aspartate kinase, monofunctional class YP_RS16030 IPR018042 Aspartate kinase, conserved site YP_RS16040 IPR005565 Haemolysin activator HlyB YP_RS16040 IPR013686 Polypeptide-transport-associated, ShlB-type YP_RS16040 IPR027282 Two partner secretion pathway transporter YP_RS16045 IPR008638 Filamentous haemagglutinin, N-terminal YP_RS16045 IPR011050 Pectin lyase fold/virulence factor YP_RS16045 IPR012334 Pectin lyase fold YP_RS16045 IPR025157 Haemagluttinin repeat YP_RS16050 IPR000489 Pterin-binding YP_RS16050 IPR003726 Homocysteine S-methyltransferase YP_RS16050 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YP_RS16050 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YP_RS16050 IPR006158 Cobalamin (vitamin B12)-binding domain YP_RS16050 IPR011005 Dihydropteroate synthase-like YP_RS16050 IPR011822 Cobalamin-dependent methionine synthase YP_RS16055 IPR005471 Transcription regulator IclR, N-terminal YP_RS16055 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS16055 IPR014757 Transcription regulator IclR, C-terminal YP_RS16055 IPR029016 GAF domain-like YP_RS16060 IPR010452 Isocitrate dehydrogenase kinasephosphatase YP_RS16065 IPR006254 Isocitrate lyase YP_RS16065 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS16065 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YP_RS16070 IPR001465 Malate synthase YP_RS16070 IPR006252 Malate synthase A YP_RS16070 IPR011076 Malate synthase-like YP_RS16075 IPR005697 Homoserine O-succinyltransferase YP_RS16075 IPR029062 Class I glutamine amidotransferase-like YP_RS16125 IPR002695 AICARFT/IMPCHase bienzyme YP_RS16125 IPR011607 Methylglyoxal synthase-like domain YP_RS16125 IPR016193 Cytidine deaminase-like YP_RS16125 IPR024051 AICAR transformylase domain YP_RS16130 IPR000115 Phosphoribosylglycinamide synthetase YP_RS16130 IPR011054 Rudiment single hybrid motif YP_RS16130 IPR013815 ATP-grasp fold, subdomain 1 YP_RS16130 IPR013816 ATP-grasp fold, subdomain 2 YP_RS16130 IPR016185 Pre-ATP-grasp domain YP_RS16130 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YP_RS16130 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YP_RS16130 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YP_RS16130 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YP_RS16135 IPR010858 Protein of unknown function DUF1481 YP_RS16135 IPR016500 Uncharacterised conserved protein UCP006993 YP_RS16140 IPR000119 Histone-like bacterial DNA-binding protein YP_RS16140 IPR010992 Integration host factor (IHF)-like DNA-binding domain YP_RS16140 IPR020816 Histone-like DNA-binding protein, conserved site YP_RS16145 IPR007338 Protein of unknown function DUF416 YP_RS16145 IPR023381 YP001051499.1-like domain YP_RS16150 IPR007581 Endonuclease V YP_RS16155 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YP_RS16155 IPR006361 Uroporphyrinogen decarboxylase HemE YP_RS16165 IPR000086 NUDIX hydrolase domain YP_RS16165 IPR015376 Zinc ribbon, NADH pyrophosphatase YP_RS16165 IPR015797 NUDIX hydrolase domain-like YP_RS16165 IPR020084 NUDIX hydrolase, conserved site YP_RS16165 IPR022925 NADH pyrophosphatase NudC YP_RS16170 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YP_RS16170 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YP_RS16180 IPR002817 Thiamine biosynthesis protein ThiC YP_RS16180 IPR025747 ThiC-associated domain YP_RS16185 IPR003733 Thiamine phosphate synthase YP_RS16185 IPR013785 Aldolase-type TIM barrel YP_RS16185 IPR022998 Thiamin phosphate synthase superfamily YP_RS16190 IPR000594 UBA/THIF-type NAD/FAD binding fold YP_RS16190 IPR016040 NAD(P)-binding domain YP_RS16195 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YP_RS16195 IPR010035 ThiS, thiamine-biosynthesis YP_RS16195 IPR012675 Beta-grasp domain YP_RS16195 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YP_RS16200 IPR008867 Thiazole biosynthesis YP_RS16200 IPR013785 Aldolase-type TIM barrel YP_RS16205 IPR007197 Radical SAM YP_RS16205 IPR010722 Biotin and thiamin synthesis-associated domain YP_RS16205 IPR012726 Thiazole biosynthesis ThiH YP_RS16205 IPR013785 Aldolase-type TIM barrel YP_RS16215 IPR000722 RNA polymerase, alpha subunit YP_RS16215 IPR006592 RNA polymerase, N-terminal YP_RS16215 IPR007066 RNA polymerase Rpb1, domain 3 YP_RS16215 IPR007080 RNA polymerase Rpb1, domain 1 YP_RS16215 IPR007081 RNA polymerase Rpb1, domain 5 YP_RS16215 IPR007083 RNA polymerase Rpb1, domain 4 YP_RS16215 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YP_RS16220 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 YP_RS16220 IPR007121 RNA polymerase, beta subunit, conserved site YP_RS16220 IPR007641 RNA polymerase Rpb2, domain 7 YP_RS16220 IPR007642 RNA polymerase Rpb2, domain 2 YP_RS16220 IPR007644 RNA polymerase, beta subunit, protrusion YP_RS16220 IPR007645 RNA polymerase Rpb2, domain 3 YP_RS16220 IPR010243 DNA-directed RNA polymerase, beta subunit YP_RS16220 IPR014724 RNA polymerase Rpb2, OB-fold YP_RS16220 IPR015712 DNA-directed RNA polymerase, subunit 2 YP_RS16220 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YP_RS16225 IPR000206 Ribosomal protein L7/L12 YP_RS16225 IPR008932 Ribosomal protein L7/L12, oligomerisation YP_RS16225 IPR013823 Ribosomal protein L7/L12, C-terminal YP_RS16225 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YP_RS16230 IPR001790 Ribosomal protein L10/acidic P0 YP_RS16230 IPR002363 Ribosomal protein L10, eubacterial, conserved site YP_RS16230 IPR022973 Ribosomal protein L10 YP_RS16235 IPR002143 Ribosomal protein L1 YP_RS16235 IPR005878 Ribosomal protein L1, bacterial-type YP_RS16235 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich YP_RS16235 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YP_RS16235 IPR023673 Ribosomal protein L1, conserved site YP_RS16235 IPR023674 Ribosomal protein L1-like YP_RS16235 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YP_RS16240 IPR000911 Ribosomal protein L11/L12 YP_RS16240 IPR006519 Ribosomal protein L11, bacterial-type YP_RS16240 IPR020783 Ribosomal protein L11, C-terminal YP_RS16240 IPR020784 Ribosomal protein L11, N-terminal YP_RS16240 IPR020785 Ribosomal protein L11, conserved site YP_RS16245 IPR001062 Transcription antitermination protein, NusG YP_RS16245 IPR005824 KOW YP_RS16245 IPR006645 NusG, N-terminal YP_RS16245 IPR008991 Translation protein SH3-like domain YP_RS16245 IPR014722 Ribosomal protein L2 domain 2 YP_RS16245 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YP_RS16250 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit YP_RS16250 IPR005807 SecE subunit of protein translocation complex YP_RS16250 IPR022943 Preprotein translocase subunit SecE YP_RS16255 IPR000795 Elongation factor, GTP-binding domain YP_RS16255 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YP_RS16255 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YP_RS16255 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YP_RS16255 IPR005225 Small GTP-binding protein domain YP_RS16255 IPR009000 Translation protein, beta-barrel domain YP_RS16255 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YP_RS16255 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16255 IPR031157 YP_RS16255 YP_RS16280 IPR001584 Integrase, catalytic core YP_RS16280 IPR012337 Ribonuclease H-like domain YP_RS16280 IPR025948 HTH-like domain YP_RS16285 IPR009057 Homeodomain-like YP_RS16285 IPR010921 Trp repressor/replication initiator YP_RS16285 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS16290 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS16290 IPR018129 Phosphoenolpyruvate carboxylase, active site YP_RS16290 IPR021135 Phosphoenolpyruvate carboxylase YP_RS16290 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YP_RS16290 IPR033129 YP_RS16290 YP_RS16295 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YP_RS16295 IPR002933 Peptidase M20 YP_RS16295 IPR010169 Acetylornithine deacetylase (ArgE) YP_RS16295 IPR011650 Peptidase M20, dimerisation domain YP_RS16300 IPR000534 Semialdehyde dehydrogenase, NAD-binding YP_RS16300 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YP_RS16300 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YP_RS16300 IPR016040 NAD(P)-binding domain YP_RS16300 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YP_RS16305 IPR001048 Aspartate/glutamate/uridylate kinase YP_RS16305 IPR004662 Acetylglutamate kinase YP_RS16310 IPR000362 Fumarate lyase family YP_RS16310 IPR008948 L-Aspartase-like YP_RS16310 IPR009049 Argininosuccinate lyase YP_RS16310 IPR020557 Fumarate lyase, conserved site YP_RS16310 IPR022761 Fumarate lyase, N-terminal YP_RS16310 IPR024083 Fumarase/histidase, N-terminal YP_RS16310 IPR029419 Argininosuccinate lyase, C-terminal YP_RS16320 IPR000531 TonB-dependent receptor, beta-barrel YP_RS16320 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YP_RS16320 IPR011276 TonB-dependent haem/haemoglobin receptor YP_RS16320 IPR012910 TonB-dependent receptor, plug YP_RS16325 IPR010495 Haem-binding HasA YP_RS16330 IPR003439 ABC transporter-like YP_RS16330 IPR003593 AAA+ ATPase domain YP_RS16330 IPR010128 ATPase, type I secretion system, PrtD YP_RS16330 IPR011527 ABC transporter type 1, transmembrane domain YP_RS16330 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16335 IPR003997 RTX secretion protein D, Gram-negative bacteria YP_RS16335 IPR006144 Secretion protein HlyD, conserved site YP_RS16335 IPR010129 Type I secretion membrane fusion protein, HlyD YP_RS16340 IPR006260 TonB, C-terminal YP_RS16345 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_RS16345 IPR016156 FAD/NAD-linked reductase, dimerisation domain YP_RS16345 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS16350 IPR002109 Glutaredoxin YP_RS16350 IPR011767 Glutaredoxin active site YP_RS16350 IPR011906 Glutaredoxin domain YP_RS16350 IPR012336 Thioredoxin-like fold YP_RS16350 IPR013740 Redoxin YP_RS16350 IPR014025 Glutaredoxin subgroup YP_RS16355 IPR000847 Transcription regulator HTH, LysR YP_RS16355 IPR005119 LysR, substrate-binding YP_RS16355 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS16360 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_RS16360 IPR016156 FAD/NAD-linked reductase, dimerisation domain YP_RS16360 IPR022962 Soluble pyridine nucleotide transhydrogenase YP_RS16360 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS16365 IPR001647 DNA-binding HTH domain, TetR-type YP_RS16365 IPR009057 Homeodomain-like YP_RS16365 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS16365 IPR023764 Transcriptional repressor HTH, FabR YP_RS16370 IPR009867 Protein of unknown function DUF1422 YP_RS16375 IPR010280 (Uracil-5)-methyltransferase family YP_RS16375 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YP_RS16375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS16375 IPR030390 YP_RS16375 YP_RS16375 IPR030391 YP_RS16375 YP_RS16385 IPR000531 TonB-dependent receptor, beta-barrel YP_RS16385 IPR010101 TonB-dependent vitamin B12 transporter BtuB YP_RS16385 IPR010917 TonB-dependent receptor, conserved site YP_RS16385 IPR012910 TonB-dependent receptor, plug YP_RS16390 IPR001920 Asp/Glu racemase YP_RS16390 IPR004391 Glutamate racemase YP_RS16390 IPR015942 Asp/Glu/hydantoin racemase YP_RS16390 IPR018187 Asp/Glu racemase, active site YP_RS16390 IPR033134 YP_RS16390 YP_RS16430 IPR025997 Periplasmic binding protein domain YP_RS16430 IPR028082 Periplasmic binding protein-like I YP_RS16435 IPR003439 ABC transporter-like YP_RS16435 IPR003593 AAA+ ATPase domain YP_RS16435 IPR017871 ABC transporter, conserved site YP_RS16435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16440 IPR001851 ABC transporter, permease YP_RS16445 IPR001851 ABC transporter, permease YP_RS16450 IPR000847 Transcription regulator HTH, LysR YP_RS16450 IPR005119 LysR, substrate-binding YP_RS16450 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS16450 IPR020890 Transcription regulator HTH, HdfR YP_RS16455 IPR007335 Protein of unknown function DUF413 YP_RS16460 IPR000523 Magnesium chelatase, ChlI subunit YP_RS16460 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase YP_RS16460 IPR003593 AAA+ ATPase domain YP_RS16460 IPR004482 Mg chelatase-related protein YP_RS16460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS16460 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS16460 IPR025158 Mg chelatase-related protein, C-terminal domain YP_RS16460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16465 IPR000399 TPP-binding enzyme, conserved site YP_RS16465 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_RS16465 IPR012000 Thiamine pyrophosphate enzyme, central domain YP_RS16465 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YP_RS16465 IPR012846 Acetolactate synthase, large subunit, biosynthetic YP_RS16465 IPR029035 DHS-like NAD/FAD-binding domain YP_RS16465 IPR029061 Thiamin diphosphate-binding fold YP_RS16475 IPR001544 Aminotransferase, class IV YP_RS16475 IPR005785 Branched-chain amino acid aminotransferase I YP_RS16475 IPR018300 Aminotransferase, class IV, conserved site YP_RS16480 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YP_RS16480 IPR004404 Dihydroxy-acid dehydratase YP_RS16480 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YP_RS16480 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YP_RS16485 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YP_RS16485 IPR001721 ACT-like domain YP_RS16485 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS16485 IPR005787 Threonine dehydratase, biosynthetic YP_RS16490 IPR010351 Protein of unknown function DUF943 YP_RS16495 IPR010351 Protein of unknown function DUF943 YP_RS16500 IPR010351 Protein of unknown function DUF943 YP_RS16505 IPR017483 Conserved hypothetical protein CHP03034 YP_RS16515 IPR000847 Transcription regulator HTH, LysR YP_RS16515 IPR005119 LysR, substrate-binding YP_RS16515 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS16520 IPR000506 Acetohydroxy acid isomeroreductase C-terminal YP_RS16520 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS16520 IPR013023 Acetohydroxy acid isomeroreductase YP_RS16520 IPR013116 Acetohydroxy acid isomeroreductase, catalytic YP_RS16520 IPR013328 Dehydrogenase, multihelical YP_RS16520 IPR016040 NAD(P)-binding domain YP_RS16530 IPR016128 Pyosin/cloacin translocation domain YP_RS16540 IPR003060 Pyocin S killer protein YP_RS16540 IPR003615 HNH nuclease YP_RS16540 IPR024622 Colicin/pyocin, DNase domain YP_RS16545 IPR000290 Colicin immunity protein/pyocin immunity protein YP_RS16545 IPR023802 Colicin/pyocin immunity protein domain YP_RS16555 IPR001829 Pili assembly chaperone, bacterial YP_RS16555 IPR008962 PapD-like YP_RS16555 IPR016147 PapD, N-terminal, bacterial YP_RS16555 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS16555 IPR018046 Pili assembly chaperone, conserved site YP_RS16560 IPR000259 Fimbrial-type adhesion domain YP_RS16560 IPR008966 Adhesion domain YP_RS16560 IPR011228 Uncharacterised conserved protein UCP029766 YP_RS16565 IPR000015 Outer membrane usher protein YP_RS16565 IPR018030 Fimbrial membrane usher, conserved site YP_RS16565 IPR025885 PapC, N-terminal domain YP_RS16565 IPR025949 PapC-like, C-terminal domain YP_RS16570 IPR001829 Pili assembly chaperone, bacterial YP_RS16570 IPR008962 PapD-like YP_RS16570 IPR016147 PapD, N-terminal, bacterial YP_RS16570 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS16575 IPR000259 Fimbrial-type adhesion domain YP_RS16575 IPR008966 Adhesion domain YP_RS16585 IPR007788 Glutamine cyclotransferase YP_RS16585 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like YP_RS16585 IPR015943 WD40/YVTN repeat-like-containing domain YP_RS16600 IPR000212 DNA helicase, UvrD/REP type YP_RS16600 IPR005752 DNA helicase, ATP-dependent, RepA type YP_RS16600 IPR013986 DExx box DNA helicase domain YP_RS16600 IPR014016 UvrD-like Helicase, ATP-binding domain YP_RS16600 IPR014017 DNA helicase, UvrD-like, C-terminal YP_RS16600 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16605 IPR003695 Ppx/GppA phosphatase YP_RS16605 IPR022371 Exopolyphosphatase YP_RS16605 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase YP_RS16605 IPR030673 YP_RS16605 YP_RS16610 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YP_RS16610 IPR001650 Helicase, C-terminal YP_RS16610 IPR011545 DEAD/DEAH box helicase domain YP_RS16610 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS16610 IPR023554 RNA helicase, ATP-dependent, RhlB-type YP_RS16610 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16615 IPR005746 Thioredoxin YP_RS16615 IPR012336 Thioredoxin-like fold YP_RS16615 IPR013766 Thioredoxin domain YP_RS16615 IPR017937 Thioredoxin, conserved site YP_RS16620 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YP_RS16620 IPR003593 AAA+ ATPase domain YP_RS16620 IPR004665 Transcription termination factor Rho YP_RS16620 IPR011112 Rho termination factor, N-terminal YP_RS16620 IPR011113 Rho termination factor, RNA-binding YP_RS16620 IPR011129 Cold shock protein YP_RS16620 IPR012340 Nucleic acid-binding, OB-fold YP_RS16620 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16625 IPR000715 Glycosyl transferase, family 4 YP_RS16625 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_RS16630 IPR003856 Lipopolysaccharide biosynthesis YP_RS16630 IPR032895 YP_RS16630 YP_RS16635 IPR003331 UDP-N-acetylglucosamine 2-epimerase YP_RS16635 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type YP_RS16635 IPR032892 YP_RS16635 YP_RS16640 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YP_RS16640 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS16640 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YP_RS16640 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YP_RS16640 IPR016040 NAD(P)-binding domain YP_RS16640 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YP_RS16640 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YP_RS16640 IPR032891 YP_RS16640 YP_RS16645 IPR005888 dTDP-glucose 4,6-dehydratase YP_RS16645 IPR016040 NAD(P)-binding domain YP_RS16650 IPR005835 Nucleotidyl transferase YP_RS16650 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YP_RS16650 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS16655 IPR000182 GNAT domain YP_RS16655 IPR012752 TDP-D-fucosamine acetyltransferase WecD YP_RS16655 IPR016181 Acyl-CoA N-acyltransferase YP_RS16660 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YP_RS16660 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase YP_RS16660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS16660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS16660 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS16660 IPR032894 YP_RS16660 YP_RS16665 IPR002797 Polysaccharide biosynthesis protein YP_RS16665 IPR032896 YP_RS16665 YP_RS16670 IPR009993 4-alpha-L-fucosyltransferase YP_RS16675 IPR010691 Uncharacterised protein family WzyE YP_RS16680 IPR004629 Glycosyl transferase WecB/TagA/CpsF YP_RS16680 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YP_RS16685 IPR002293 Amino acid/polyamine transporter I YP_RS16685 IPR004840 Amino acid permease, conserved site YP_RS16685 IPR004841 Amino acid permease/ SLC12A domain YP_RS16710 IPR002686 Transposase IS200-like YP_RS16715 IPR005254 Heme biosynthesis-associated TPR protein YP_RS16715 IPR010817 HemY, N-terminal YP_RS16715 IPR011990 Tetratricopeptide-like helical domain YP_RS16720 IPR007470 HemX YP_RS16725 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YP_RS16730 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase YP_RS16730 IPR022417 Porphobilinogen deaminase, N-terminal YP_RS16730 IPR022418 Porphobilinogen deaminase, C-terminal YP_RS16730 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YP_RS16735 IPR000274 Adenylate cyclase, class-I YP_RS16735 IPR024685 Adenylate cyclase class-I, N-terminal domain YP_RS16735 IPR024686 Adenylate cyclase class-I, conserved site YP_RS16740 IPR002908 Frataxin/CyaY YP_RS16740 IPR020895 Frataxin conserved site YP_RS16745 IPR032831 YP_RS16745 YP_RS16750 IPR001653 Diaminopimelate epimerase, DapF YP_RS16750 IPR018510 Diaminopimelate epimerase, active site YP_RS16755 IPR007435 Protein of unknown function DUF484 YP_RS16760 IPR002104 Integrase, catalytic YP_RS16760 IPR004107 Integrase, SAM-like, N-terminal YP_RS16760 IPR010998 Integrase, Lambda-type, N-terminal YP_RS16760 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS16760 IPR011931 Tyrosine recombinase XerC YP_RS16760 IPR013762 Integrase-like, catalytic core YP_RS16760 IPR023009 Tyrosine recombinase XerC/XerD YP_RS16760 IPR023109 Integrase/recombinase, N-terminal YP_RS16765 IPR006439 HAD hydrolase, subfamily IA YP_RS16765 IPR023214 HAD-like domain YP_RS16770 IPR000212 DNA helicase, UvrD/REP type YP_RS16770 IPR005753 DNA helicase, ATP-dependent, UvrD type YP_RS16770 IPR013986 DExx box DNA helicase domain YP_RS16770 IPR014016 UvrD-like Helicase, ATP-binding domain YP_RS16770 IPR014017 DNA helicase, UvrD-like, C-terminal YP_RS16770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16775 IPR001647 DNA-binding HTH domain, TetR-type YP_RS16775 IPR009057 Homeodomain-like YP_RS16775 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS16780 IPR008322 Uncharacterised protein family UPF0261 YP_RS16785 IPR009215 TIM-barrel domain, IGPS-like YP_RS16785 IPR013785 Aldolase-type TIM barrel YP_RS16785 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS16790 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YP_RS16790 IPR004488 Magnesium/cobalt transport protein CorA YP_RS16795 IPR000620 Drug/metabolite transporter YP_RS16795 IPR004626 RarD protein YP_RS16800 IPR003736 Phenylacetic acid degradation-related domain YP_RS16800 IPR006683 Thioesterase superfamily YP_RS16800 IPR029069 HotDog domain YP_RS16805 IPR003187 Phospholipase A1 YP_RS16810 IPR001650 Helicase, C-terminal YP_RS16810 IPR002121 HRDC domain YP_RS16810 IPR004589 DNA helicase, ATP-dependent, RecQ type YP_RS16810 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YP_RS16810 IPR010997 HRDC-like YP_RS16810 IPR011545 DEAD/DEAH box helicase domain YP_RS16810 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS16810 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS16810 IPR018982 RQC domain YP_RS16810 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16810 IPR032284 YP_RS16810 YP_RS16815 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YP_RS16815 IPR004778 Homoserine/Threonine efflux protein YP_RS16820 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YP_RS16825 IPR022742 Putative lysophospholipase YP_RS16825 IPR029058 Alpha/Beta hydrolase fold YP_RS16830 IPR000150 Cof protein YP_RS16830 IPR006379 HAD-superfamily hydrolase, subfamily IIB YP_RS16830 IPR023214 HAD-like domain YP_RS16835 IPR004954 Peptidase M60, viral enhancin protein YP_RS16840 IPR004129 Glycerophosphoryl diester phosphodiesterase YP_RS16840 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YP_RS16840 IPR030395 YP_RS16840 YP_RS16850 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YP_RS16850 IPR006076 FAD dependent oxidoreductase YP_RS16850 IPR007419 BFD-like [2Fe-2S]-binding domain YP_RS16850 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YP_RS16850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS16850 IPR031656 YP_RS16850 YP_RS16855 IPR003953 FAD binding domain YP_RS16855 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YP_RS16855 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS16860 IPR004017 Cysteine-rich domain YP_RS16860 IPR009051 Alpha-helical ferredoxin YP_RS16860 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YP_RS16860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS16860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS16865 IPR014894 Protein DcrB YP_RS16870 IPR003744 Protein of unknown function DUF165 YP_RS16875 IPR001455 TusA-like domain YP_RS16875 IPR022931 Sulphurtransferase TusA YP_RS16880 IPR001757 Cation-transporting P-type ATPase YP_RS16880 IPR006121 Heavy metal-associated domain, HMA YP_RS16880 IPR008250 P-type ATPase, A domain YP_RS16880 IPR017969 Heavy-metal-associated, conserved site YP_RS16880 IPR018303 P-type ATPase, phosphorylation site YP_RS16880 IPR023214 HAD-like domain YP_RS16880 IPR023299 P-type ATPase, cytoplasmic domain N YP_RS16880 IPR027256 Cation-transporting P-type ATPase, subfamily IB YP_RS16885 IPR012506 YhhN-like YP_RS16890 IPR014949 Protein of unknown function DUF1820 YP_RS16895 IPR019635 Protein of unknown function DUF2500 YP_RS16900 IPR009525 Protein of unknown function DUF1145 YP_RS16905 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS16905 IPR004398 RNA methyltransferase, RsmD YP_RS16905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS16915 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YP_RS16915 IPR003593 AAA+ ATPase domain YP_RS16915 IPR004390 Signal-recognition particle receptor FtsY YP_RS16915 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YP_RS16915 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16920 IPR003439 ABC transporter-like YP_RS16920 IPR003593 AAA+ ATPase domain YP_RS16920 IPR005286 Cell division protein FtsE, ATP-binding YP_RS16920 IPR017871 ABC transporter, conserved site YP_RS16920 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16925 IPR003838 Permease FtsX-like YP_RS16925 IPR004513 ABC transporter, cell division protein FtsX YP_RS16930 IPR000943 RNA polymerase sigma-70 YP_RS16930 IPR007627 RNA polymerase sigma-70 region 2 YP_RS16930 IPR007630 RNA polymerase sigma-70 region 4 YP_RS16930 IPR009042 RNA polymerase sigma-70 region 1.2 YP_RS16930 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS16930 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YP_RS16930 IPR013324 RNA polymerase sigma factor, region 3/4 YP_RS16930 IPR013325 RNA polymerase sigma factor, region 2 YP_RS16930 IPR014284 RNA polymerase sigma-70 like domain YP_RS16930 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE YP_RS16940 IPR002686 Transposase IS200-like YP_RS16945 IPR000182 GNAT domain YP_RS16945 IPR016181 Acyl-CoA N-acyltransferase YP_RS16945 IPR032900 YP_RS16945 YP_RS16950 IPR000709 Leu/Ile/Val-binding protein YP_RS16950 IPR028081 Leucine-binding protein domain YP_RS16950 IPR028082 Periplasmic binding protein-like I YP_RS16955 IPR001851 ABC transporter, permease YP_RS16960 IPR001851 ABC transporter, permease YP_RS16960 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YP_RS16965 IPR003439 ABC transporter-like YP_RS16965 IPR003593 AAA+ ATPase domain YP_RS16965 IPR017871 ABC transporter, conserved site YP_RS16965 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16965 IPR032823 YP_RS16965 YP_RS16970 IPR003439 ABC transporter-like YP_RS16970 IPR003593 AAA+ ATPase domain YP_RS16970 IPR017871 ABC transporter, conserved site YP_RS16970 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS16970 IPR030660 YP_RS16970 YP_RS16985 IPR007540 Fimbrial major subunit, CS1-type YP_RS16995 IPR008962 PapD-like YP_RS17000 IPR032636 YP_RS17000 YP_RS17005 IPR007540 Fimbrial major subunit, CS1-type YP_RS17010 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YP_RS17015 IPR000515 MetI-like domain YP_RS17020 IPR000515 MetI-like domain YP_RS17020 IPR030165 YP_RS17020 YP_RS17025 IPR003439 ABC transporter-like YP_RS17025 IPR003593 AAA+ ATPase domain YP_RS17025 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS17025 IPR012340 Nucleic acid-binding, OB-fold YP_RS17025 IPR013611 Transport-associated OB, type 2 YP_RS17025 IPR017871 ABC transporter, conserved site YP_RS17025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17030 IPR004129 Glycerophosphoryl diester phosphodiesterase YP_RS17030 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YP_RS17030 IPR030395 YP_RS17030 YP_RS17035 IPR004776 Auxin efflux carrier YP_RS17040 IPR000620 Drug/metabolite transporter YP_RS17040 IPR004779 Carboxylate/Amino Acid/Amine Transporter YP_RS17045 IPR000847 Transcription regulator HTH, LysR YP_RS17045 IPR005119 LysR, substrate-binding YP_RS17045 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS17050 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YP_RS17050 IPR006276 Cobalamin-independent methionine synthase YP_RS17050 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YP_RS17055 IPR002925 Dienelactone hydrolase YP_RS17055 IPR029058 Alpha/Beta hydrolase fold YP_RS17060 IPR000845 Nucleoside phosphorylase domain YP_RS17060 IPR010058 Uridine phosphorylase YP_RS17060 IPR018016 Nucleoside phosphorylase, conserved site YP_RS17060 IPR018017 Nucleoside phosphorylase YP_RS17065 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YP_RS17065 IPR029021 Protein-tyrosine phosphatase-like YP_RS17070 IPR003706 Carbon starvation protein CstA YP_RS17070 IPR025299 CstA C-terminal domain YP_RS17075 IPR032816 YP_RS17075 YP_RS17075 IPR032818 YP_RS17075 YP_RS17080 IPR003798 DNA recombination RmuC YP_RS17085 IPR004033 UbiE/COQ5 methyltransferase YP_RS17085 IPR023576 UbiE/COQ5 methyltransferase, conserved site YP_RS17085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS17090 IPR003033 SCP2 sterol-binding domain YP_RS17095 IPR004147 UbiB domain YP_RS17095 IPR010232 Probable protein kinase UbiB YP_RS17095 IPR011009 Protein kinase-like domain YP_RS17100 IPR003369 Sec-independent protein translocase protein TatA/B/E YP_RS17100 IPR006312 Sec-independent protein translocase protein TatA/E YP_RS17105 IPR003998 Twin-arginine translocation protein TatB-like YP_RS17105 IPR018448 Twin-arginine translocation protein TatB YP_RS17110 IPR002033 Sec-independent periplasmic protein translocase TatC YP_RS17110 IPR019820 Sec-independent periplasmic protein translocase, conserved site YP_RS17115 IPR001130 TatD family YP_RS17115 IPR018228 Deoxyribonuclease, TatD-related, conserved site YP_RS17115 IPR032466 YP_RS17115 YP_RS17120 IPR001584 Integrase, catalytic core YP_RS17120 IPR006120 Resolvase, HTH domain YP_RS17120 IPR009057 Homeodomain-like YP_RS17120 IPR012337 Ribonuclease H-like domain YP_RS17125 IPR001270 ClpA/B family YP_RS17125 IPR002611 IstB-like ATP-binding protein YP_RS17125 IPR003593 AAA+ ATPase domain YP_RS17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17125 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS17130 IPR001130 TatD family YP_RS17130 IPR018228 Deoxyribonuclease, TatD-related, conserved site YP_RS17130 IPR032466 YP_RS17130 YP_RS17135 IPR001731 Porphobilinogen synthase YP_RS17135 IPR013785 Aldolase-type TIM barrel YP_RS17135 IPR030656 YP_RS17135 YP_RS17140 IPR005824 KOW YP_RS17140 IPR006645 NusG, N-terminal YP_RS17140 IPR010215 Transcription antitermination protein RfaH YP_RS17145 IPR002830 UbiD decarboxylyase family YP_RS17145 IPR012349 FMN-binding split barrel YP_RS17145 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_RS17150 IPR001221 Phenol hydroxylase reductase YP_RS17150 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS17150 IPR008333 Oxidoreductase, FAD-binding domain YP_RS17150 IPR017938 Riboflavin synthase-like beta-barrel YP_RS17155 IPR002155 Thiolase YP_RS17155 IPR012805 Acetyl-CoA C-acyltransferase FadA YP_RS17155 IPR016039 Thiolase-like YP_RS17155 IPR020610 Thiolase, active site YP_RS17155 IPR020613 Thiolase, conserved site YP_RS17155 IPR020615 Thiolase, acyl-enzyme intermediate active site YP_RS17155 IPR020616 Thiolase, N-terminal YP_RS17155 IPR020617 Thiolase, C-terminal YP_RS17160 IPR001753 Crotonase superfamily YP_RS17160 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_RS17160 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YP_RS17160 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YP_RS17160 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS17160 IPR012799 Fatty oxidation complex, alpha subunit FadB YP_RS17160 IPR013328 Dehydrogenase, multihelical YP_RS17160 IPR016040 NAD(P)-binding domain YP_RS17160 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YP_RS17160 IPR029045 ClpP/crotonase-like domain YP_RS17165 IPR000994 Peptidase M24, structural domain YP_RS17165 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YP_RS17165 IPR022846 Xaa-Pro dipeptidase YP_RS17170 IPR000640 Translation elongation factor EFG, V domain YP_RS17170 IPR001498 Impact, N-terminal YP_RS17170 IPR009022 Elongation factor G, III-V domain YP_RS17170 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YP_RS17170 IPR015796 Impact family, bacterial/archaeal YP_RS17170 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS17170 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YP_RS17170 IPR023582 Impact family YP_RS17175 IPR003445 Cation transporter YP_RS17175 IPR004772 Potassium uptake protein TrkH family YP_RS17180 IPR001226 Flavodoxin, conserved site YP_RS17180 IPR026816 Flavodoxin domain YP_RS17180 IPR029039 Flavoprotein-like YP_RS17210 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YP_RS17210 IPR006094 FAD linked oxidase, N-terminal YP_RS17210 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YP_RS17210 IPR016166 FAD-binding, type 2 YP_RS17210 IPR016167 FAD-binding, type 2, subdomain 1 YP_RS17210 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YP_RS17215 IPR003142 Biotin protein ligase, C-terminal YP_RS17215 IPR004143 Biotin/lipoate A/B protein ligase YP_RS17215 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YP_RS17215 IPR004409 Biotin operon repressor, helix-turn-helix domain YP_RS17215 IPR008988 Transcriptional repressor, C-terminal YP_RS17215 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS17215 IPR013196 Helix-turn-helix, type 11 YP_RS17215 IPR030855 YP_RS17215 YP_RS17220 IPR004566 Bacterial pantothenate kinase YP_RS17220 IPR006083 Phosphoribulokinase/uridine kinase YP_RS17220 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17225 IPR000182 GNAT domain YP_RS17225 IPR016181 Acyl-CoA N-acyltransferase YP_RS17230 IPR001584 Integrase, catalytic core YP_RS17230 IPR006120 Resolvase, HTH domain YP_RS17230 IPR009057 Homeodomain-like YP_RS17230 IPR012337 Ribonuclease H-like domain YP_RS17235 IPR001270 ClpA/B family YP_RS17235 IPR002611 IstB-like ATP-binding protein YP_RS17235 IPR003593 AAA+ ATPase domain YP_RS17235 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17235 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS17240 IPR001584 Integrase, catalytic core YP_RS17240 IPR012337 Ribonuclease H-like domain YP_RS17250 IPR010351 Protein of unknown function DUF943 YP_RS17260 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YP_RS17260 IPR006076 FAD dependent oxidoreductase YP_RS17260 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS17260 IPR031656 YP_RS17260 YP_RS17265 IPR000811 Glycosyl transferase, family 35 YP_RS17265 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YP_RS17270 IPR001296 Glycosyl transferase, family 1 YP_RS17270 IPR011835 Glycogen/starch synthase, ADP-glucose type YP_RS17270 IPR013534 Starch synthase, catalytic domain YP_RS17275 IPR005835 Nucleotidyl transferase YP_RS17275 IPR005836 ADP-glucose pyrophosphorylase, conserved site YP_RS17275 IPR011004 Trimeric LpxA-like YP_RS17275 IPR011831 Glucose-1-phosphate adenylyltransferase YP_RS17275 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YP_RS17275 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS17280 IPR004193 Glycoside hydrolase, family 13, N-terminal YP_RS17280 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YP_RS17280 IPR011837 Glycogen debranching enzyme, GlgX type YP_RS17280 IPR013780 Glycosyl hydrolase, family 13, all-beta YP_RS17280 IPR013781 Glycoside hydrolase, catalytic domain YP_RS17280 IPR013783 Immunoglobulin-like fold YP_RS17280 IPR014756 Immunoglobulin E-set YP_RS17280 IPR015902 Glycoside hydrolase, family 13 YP_RS17280 IPR017853 Glycoside hydrolase, superfamily YP_RS17280 IPR022844 Glycogen debranching enzyme, bacterial YP_RS17285 IPR004193 Glycoside hydrolase, family 13, N-terminal YP_RS17285 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YP_RS17285 IPR006048 Alpha-amylase, C-terminal all beta YP_RS17285 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YP_RS17285 IPR013780 Glycosyl hydrolase, family 13, all-beta YP_RS17285 IPR013781 Glycoside hydrolase, catalytic domain YP_RS17285 IPR013783 Immunoglobulin-like fold YP_RS17285 IPR014756 Immunoglobulin E-set YP_RS17285 IPR015902 Glycoside hydrolase, family 13 YP_RS17285 IPR017853 Glycoside hydrolase, superfamily YP_RS17290 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS17290 IPR010559 Signal transduction histidine kinase, internal region YP_RS17290 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YP_RS17290 IPR029016 GAF domain-like YP_RS17295 IPR003344 Bacterial Ig-like, group 1 YP_RS17295 IPR003535 Intimin/invasin bacterial adhesion mediator protein YP_RS17295 IPR008964 Invasin/intimin cell-adhesion YP_RS17295 IPR016186 C-type lectin-like YP_RS17295 IPR018392 LysM domain YP_RS17295 IPR024519 Domain of unknown function DUF3442, intimin/invasin YP_RS17320 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YP_RS17320 IPR000534 Semialdehyde dehydrogenase, NAD-binding YP_RS17320 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YP_RS17320 IPR012080 Aspartate-semialdehyde dehydrogenase YP_RS17320 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YP_RS17320 IPR016040 NAD(P)-binding domain YP_RS17325 IPR002771 Multiple antibiotic resistance (MarC)-related YP_RS17345 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YP_RS17345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17345 IPR031322 YP_RS17345 YP_RS17350 IPR003474 Gluconate transporter YP_RS17355 IPR000843 Transcription regulator HTH, LacI YP_RS17355 IPR001761 Periplasmic binding protein/LacI sugar binding domain YP_RS17355 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS17355 IPR028082 Periplasmic binding protein-like I YP_RS17360 IPR003829 Pirin, N-terminal domain YP_RS17360 IPR011051 RmlC-like cupin domain YP_RS17360 IPR012093 Pirin YP_RS17360 IPR014710 RmlC-like jelly roll fold YP_RS17370 IPR001789 Signal transduction response regulator, receiver domain YP_RS17370 IPR001867 Signal transduction response regulator, C-terminal YP_RS17370 IPR011006 CheY-like superfamily YP_RS17370 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS17370 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS17375 IPR011611 Carbohydrate kinase PfkB YP_RS17375 IPR029056 Ribokinase-like YP_RS17380 IPR000771 Ketose-bisphosphate aldolase, class-II YP_RS17380 IPR013785 Aldolase-type TIM barrel YP_RS17385 IPR010864 Protein of unknown function DUF1498 YP_RS17385 IPR011051 RmlC-like cupin domain YP_RS17390 IPR025997 Periplasmic binding protein domain YP_RS17390 IPR028082 Periplasmic binding protein-like I YP_RS17395 IPR001851 ABC transporter, permease YP_RS17400 IPR003439 ABC transporter-like YP_RS17400 IPR003593 AAA+ ATPase domain YP_RS17400 IPR017871 ABC transporter, conserved site YP_RS17400 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17405 IPR000014 PAS domain YP_RS17405 IPR001789 Signal transduction response regulator, receiver domain YP_RS17405 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS17405 IPR003660 HAMP linker domain YP_RS17405 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS17405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS17405 IPR011006 CheY-like superfamily YP_RS17410 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YP_RS17410 IPR023166 HI0933 insert-like domain YP_RS17410 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS17415 IPR001204 Phosphate transporter YP_RS17420 IPR002686 Transposase IS200-like YP_RS17425 IPR019598 Universal stress protein B YP_RS17430 IPR006015 Universal stress protein A YP_RS17430 IPR006016 UspA YP_RS17430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS17435 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YP_RS17435 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YP_RS17435 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YP_RS17435 IPR014362 Glutamate dehydrogenase YP_RS17435 IPR016040 NAD(P)-binding domain YP_RS17440 IPR006026 Peptidase, metallopeptidase YP_RS17440 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS17440 IPR013858 Peptidase M10 serralysin C-terminal domain YP_RS17440 IPR016294 Peptidase M10B YP_RS17440 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass YP_RS17440 IPR024079 Metallopeptidase, catalytic domain YP_RS17445 IPR007536 Ribosomal RNA small subunit methyltransferase J YP_RS17445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS17450 IPR001567 Peptidase M3A/M3B YP_RS17450 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YP_RS17450 IPR024079 Metallopeptidase, catalytic domain YP_RS17450 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal YP_RS17455 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS17455 IPR007473 Ribosomal RNA large subunit methyltransferase J YP_RS17455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS17460 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_RS17460 IPR006322 Glutathione reductase, eukaryote/bacterial YP_RS17460 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YP_RS17460 IPR016156 FAD/NAD-linked reductase, dimerisation domain YP_RS17460 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS17465 IPR008599 Putative sugar diacid recognition YP_RS17465 IPR009057 Homeodomain-like YP_RS17465 IPR025736 PucR C-terminal helix-turn-helix domain YP_RS17470 IPR003474 Gluconate transporter YP_RS17475 IPR004381 Glycerate kinase YP_RS17475 IPR018193 Glycerate kinase, flavodoxin-like domain YP_RS17480 IPR010351 Protein of unknown function DUF943 YP_RS17485 IPR010351 Protein of unknown function DUF943 YP_RS17490 IPR017483 Conserved hypothetical protein CHP03034 YP_RS17495 IPR004899 Pertactin, central region YP_RS17495 IPR005546 Autotransporter beta-domain YP_RS17495 IPR006315 Outer membrane autotransporter barrel YP_RS17495 IPR011050 Pectin lyase fold/virulence factor YP_RS17495 IPR012332 P22 tailspike C-terminal domain-like YP_RS17500 IPR005274 Inner membrane protein YhjD YP_RS17500 IPR017039 Virulence factor BrkB YP_RS17505 IPR003763 CDP-diacylglycerol pyrophosphatase YP_RS17505 IPR011146 HIT-like domain YP_RS17510 IPR007844 AsmA YP_RS17515 IPR001633 EAL domain YP_RS17520 IPR004370 4-oxalocrotonate tautomerase YP_RS17520 IPR014347 Tautomerase/MIF superfamily YP_RS17520 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type YP_RS17525 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YP_RS17525 IPR011611 Carbohydrate kinase PfkB YP_RS17525 IPR029056 Ribokinase-like YP_RS17530 IPR007863 Peptidase M16, C-terminal domain YP_RS17530 IPR011237 Peptidase M16 domain YP_RS17530 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YP_RS17530 IPR011765 Peptidase M16, N-terminal YP_RS17535 IPR001991 Sodium:dicarboxylate symporter YP_RS17535 IPR018107 Sodium:dicarboxylate symporter, conserved site YP_RS17535 IPR023954 C4-dicarboxylate transport protein YP_RS17540 IPR000421 Coagulation factor 5/8 C-terminal type domain YP_RS17540 IPR008979 Galactose-binding domain-like YP_RS17545 IPR010702 Periplasmic pectate lyase YP_RS17550 IPR009331 Oligogalacturonate-specific porin YP_RS17555 IPR000160 GGDEF domain YP_RS17555 IPR001633 EAL domain YP_RS17555 IPR003660 HAMP linker domain YP_RS17555 IPR029787 Nucleotide cyclase YP_RS17555 IPR033419 YP_RS17555 YP_RS17560 IPR002037 Glycoside hydrolase, family 8 YP_RS17560 IPR008928 Six-hairpin glycosidase-like YP_RS17560 IPR012341 Six-hairpin glycosidase YP_RS17565 IPR003439 ABC transporter-like YP_RS17565 IPR003593 AAA+ ATPase domain YP_RS17565 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YP_RS17565 IPR017871 ABC transporter, conserved site YP_RS17565 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17570 IPR003439 ABC transporter-like YP_RS17570 IPR003593 AAA+ ATPase domain YP_RS17570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YP_RS17570 IPR017871 ABC transporter, conserved site YP_RS17570 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17575 IPR000515 MetI-like domain YP_RS17575 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YP_RS17580 IPR000515 MetI-like domain YP_RS17585 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS17585 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YP_RS17585 IPR030678 YP_RS17585 YP_RS17595 IPR005565 Haemolysin activator HlyB YP_RS17595 IPR013686 Polypeptide-transport-associated, ShlB-type YP_RS17595 IPR027282 Two partner secretion pathway transporter YP_RS17600 IPR008638 Filamentous haemagglutinin, N-terminal YP_RS17600 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YP_RS17600 IPR011050 Pectin lyase fold/virulence factor YP_RS17600 IPR012334 Pectin lyase fold YP_RS17610 IPR000849 Sugar phosphate transporter YP_RS17610 IPR011701 Major facilitator superfamily YP_RS17610 IPR020846 Major facilitator superfamily domain YP_RS17615 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS17615 IPR007895 MASE1 YP_RS17615 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YP_RS17620 IPR000792 Transcription regulator LuxR, C-terminal YP_RS17620 IPR001789 Signal transduction response regulator, receiver domain YP_RS17620 IPR011006 CheY-like superfamily YP_RS17620 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS17620 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS17625 IPR000917 Sulfatase YP_RS17625 IPR012549 Domain of unknown function DUF1705 YP_RS17625 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS17625 IPR017850 Alkaline-phosphatase-like, core domain YP_RS17630 IPR022742 Putative lysophospholipase YP_RS17630 IPR029058 Alpha/Beta hydrolase fold YP_RS17635 IPR002293 Amino acid/polyamine transporter I YP_RS17635 IPR004841 Amino acid permease/ SLC12A domain YP_RS17640 IPR001270 ClpA/B family YP_RS17640 IPR002611 IstB-like ATP-binding protein YP_RS17640 IPR003593 AAA+ ATPase domain YP_RS17640 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17640 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS17645 IPR001584 Integrase, catalytic core YP_RS17645 IPR006120 Resolvase, HTH domain YP_RS17645 IPR009057 Homeodomain-like YP_RS17645 IPR012337 Ribonuclease H-like domain YP_RS17650 IPR001106 Aromatic amino acid lyase YP_RS17650 IPR005921 Histidine ammonia-lyase YP_RS17650 IPR008948 L-Aspartase-like YP_RS17650 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YP_RS17650 IPR024083 Fumarase/histidase, N-terminal YP_RS17655 IPR023636 Urocanase conserved site YP_RS17655 IPR023637 Urocanase YP_RS17660 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS17665 IPR000836 Phosphoribosyltransferase domain YP_RS17665 IPR029057 Phosphoribosyltransferase-like YP_RS17670 IPR000620 Drug/metabolite transporter YP_RS17675 IPR013816 ATP-grasp fold, subdomain 2 YP_RS17680 IPR002491 ABC transporter periplasmic binding domain YP_RS17685 IPR000522 ABC transporter, permease protein YP_RS17685 IPR029022 ABC transporter, BtuC-like YP_RS17690 IPR000522 ABC transporter, permease protein YP_RS17690 IPR029022 ABC transporter, BtuC-like YP_RS17695 IPR003439 ABC transporter-like YP_RS17695 IPR003593 AAA+ ATPase domain YP_RS17695 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17700 IPR011204 Virulence protein RhuM-like YP_RS17710 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS17710 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS17715 IPR002559 Transposase, IS4-like YP_RS17725 IPR007684 Zinc finger, Ogr/Delta-type YP_RS17735 IPR002104 Integrase, catalytic YP_RS17735 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS17735 IPR013762 Integrase-like, catalytic core YP_RS17735 IPR023109 Integrase/recombinase, N-terminal YP_RS17735 IPR025166 Domain of unknown function DUF4102 YP_RS17740 IPR009057 Homeodomain-like YP_RS17740 IPR018060 DNA binding HTH domain, AraC-type YP_RS17740 IPR018062 HTH domain AraC-type, conserved site YP_RS17740 IPR020449 Transcription regulator HTH, AraC- type YP_RS17740 IPR028082 Periplasmic binding protein-like I YP_RS17745 IPR001851 ABC transporter, permease YP_RS17750 IPR003439 ABC transporter-like YP_RS17750 IPR003593 AAA+ ATPase domain YP_RS17750 IPR013455 ABC transporter, D-xylose, ATP-binding protein YP_RS17750 IPR017871 ABC transporter, conserved site YP_RS17750 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17755 IPR013456 D-xylose ABC transporter, substrate-binding protein YP_RS17755 IPR025997 Periplasmic binding protein domain YP_RS17755 IPR028082 Periplasmic binding protein-like I YP_RS17760 IPR001998 Xylose isomerase YP_RS17760 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS17760 IPR013452 Xylose isomerase, bacterial-type YP_RS17765 IPR000577 YP_RS17765 YP_RS17765 IPR006000 Xylulokinase YP_RS17765 IPR018483 Carbohydrate kinase, FGGY, conserved site YP_RS17765 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS17765 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS17770 IPR000259 Fimbrial-type adhesion domain YP_RS17770 IPR008966 Adhesion domain YP_RS17775 IPR001829 Pili assembly chaperone, bacterial YP_RS17775 IPR008962 PapD-like YP_RS17775 IPR016147 PapD, N-terminal, bacterial YP_RS17775 IPR016148 Pili assembly chaperone, C-terminal domain YP_RS17775 IPR018046 Pili assembly chaperone, conserved site YP_RS17790 IPR000259 Fimbrial-type adhesion domain YP_RS17790 IPR008966 Adhesion domain YP_RS17795 IPR002656 Acyltransferase 3 YP_RS17795 IPR032905 YP_RS17795 YP_RS17805 IPR009057 Homeodomain-like YP_RS17805 IPR010921 Trp repressor/replication initiator YP_RS17805 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS17810 IPR001584 Integrase, catalytic core YP_RS17810 IPR012337 Ribonuclease H-like domain YP_RS17810 IPR025948 HTH-like domain YP_RS17815 IPR000014 PAS domain YP_RS17815 IPR000160 GGDEF domain YP_RS17815 IPR001633 EAL domain YP_RS17815 IPR007892 CHASE4 YP_RS17815 IPR013767 PAS fold YP_RS17815 IPR029787 Nucleotide cyclase YP_RS17820 IPR006143 RND efflux pump, membrane fusion protein YP_RS17825 IPR001036 Acriflavin resistance protein YP_RS17825 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YP_RS17825 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YP_RS17830 IPR012927 ShET2 enterotoxin, N-terminal YP_RS17840 IPR005546 Autotransporter beta-domain YP_RS17840 IPR006315 Outer membrane autotransporter barrel YP_RS17840 IPR011050 Pectin lyase fold/virulence factor YP_RS17840 IPR012332 P22 tailspike C-terminal domain-like YP_RS17840 IPR024973 ESPR domain YP_RS17845 IPR029487 Novel E3 ligase domain YP_RS17845 IPR032674 YP_RS17845 YP_RS17845 IPR032675 YP_RS17845 YP_RS17850 IPR032674 YP_RS17850 YP_RS17850 IPR032675 YP_RS17850 YP_RS17855 IPR003591 Leucine-rich repeat, typical subtype YP_RS17855 IPR029487 Novel E3 ligase domain YP_RS17855 IPR032674 YP_RS17855 YP_RS17855 IPR032675 YP_RS17855 YP_RS17860 IPR004697 AbgT YP_RS17865 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YP_RS17865 IPR002933 Peptidase M20 YP_RS17865 IPR010161 Peptidase M20B, tripeptide aminopeptidase YP_RS17865 IPR011650 Peptidase M20, dimerisation domain YP_RS17870 IPR000531 TonB-dependent receptor, beta-barrel YP_RS17870 IPR012910 TonB-dependent receptor, plug YP_RS17875 IPR000873 AMP-dependent synthetase/ligase YP_RS17875 IPR009081 Acyl carrier protein-like YP_RS17875 IPR014030 Beta-ketoacyl synthase, N-terminal YP_RS17875 IPR014031 Beta-ketoacyl synthase, C-terminal YP_RS17875 IPR016039 Thiolase-like YP_RS17875 IPR018201 Beta-ketoacyl synthase, active site YP_RS17875 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YP_RS17875 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YP_RS17880 IPR000873 AMP-dependent synthetase/ligase YP_RS17880 IPR001242 Condensation domain YP_RS17880 IPR006162 Phosphopantetheine attachment site YP_RS17880 IPR009081 Acyl carrier protein-like YP_RS17880 IPR010071 Amino acid adenylation domain YP_RS17880 IPR013624 Non-ribosomal peptide synthetase YP_RS17880 IPR020845 AMP-binding, conserved site YP_RS17885 IPR000873 AMP-dependent synthetase/ligase YP_RS17885 IPR009081 Acyl carrier protein-like YP_RS17885 IPR010071 Amino acid adenylation domain YP_RS17885 IPR020845 AMP-binding, conserved site YP_RS17890 IPR000873 AMP-dependent synthetase/ligase YP_RS17890 IPR001031 Thioesterase YP_RS17890 IPR001242 Condensation domain YP_RS17890 IPR006162 Phosphopantetheine attachment site YP_RS17890 IPR009081 Acyl carrier protein-like YP_RS17890 IPR010071 Amino acid adenylation domain YP_RS17890 IPR013217 Methyltransferase type 12 YP_RS17890 IPR013624 Non-ribosomal peptide synthetase YP_RS17890 IPR020845 AMP-binding, conserved site YP_RS17890 IPR029058 Alpha/Beta hydrolase fold YP_RS17890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS17895 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YP_RS17895 IPR016040 NAD(P)-binding domain YP_RS17900 IPR000683 Oxidoreductase, N-terminal YP_RS17900 IPR010091 Thiazolinyl imide reductase YP_RS17900 IPR016040 NAD(P)-binding domain YP_RS17905 IPR001031 Thioesterase YP_RS17905 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YP_RS17905 IPR029058 Alpha/Beta hydrolase fold YP_RS17910 IPR011701 Major facilitator superfamily YP_RS17910 IPR020846 Major facilitator superfamily domain YP_RS17915 IPR003439 ABC transporter-like YP_RS17915 IPR003593 AAA+ ATPase domain YP_RS17915 IPR011527 ABC transporter type 1, transmembrane domain YP_RS17915 IPR017871 ABC transporter, conserved site YP_RS17915 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17920 IPR003439 ABC transporter-like YP_RS17920 IPR003593 AAA+ ATPase domain YP_RS17920 IPR011527 ABC transporter type 1, transmembrane domain YP_RS17920 IPR017871 ABC transporter, conserved site YP_RS17920 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS17935 IPR003474 Gluconate transporter YP_RS17945 IPR005546 Autotransporter beta-domain YP_RS17945 IPR006315 Outer membrane autotransporter barrel YP_RS17945 IPR011050 Pectin lyase fold/virulence factor YP_RS17945 IPR012332 P22 tailspike C-terminal domain-like YP_RS17950 IPR005546 Autotransporter beta-domain YP_RS17950 IPR006315 Outer membrane autotransporter barrel YP_RS17950 IPR011050 Pectin lyase fold/virulence factor YP_RS17950 IPR012332 P22 tailspike C-terminal domain-like YP_RS17955 IPR006531 Gp5 N-terminal YP_RS17955 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YP_RS17955 IPR010609 Gp5, C-terminal YP_RS17955 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YP_RS17960 IPR011990 Tetratricopeptide-like helical domain YP_RS17965 IPR001826 RHS protein YP_RS17965 IPR006530 YD repeat YP_RS17965 IPR022385 Rhs repeat-associated core YP_RS17965 IPR031325 YP_RS17965 YP_RS17980 IPR001898 Sodium/sulphate symporter YP_RS17980 IPR031312 YP_RS17980 YP_RS17985 IPR000843 Transcription regulator HTH, LacI YP_RS17985 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS17985 IPR028082 Periplasmic binding protein-like I YP_RS17990 IPR001547 Glycoside hydrolase, family 5 YP_RS17990 IPR013781 Glycoside hydrolase, catalytic domain YP_RS17990 IPR017853 Glycoside hydrolase, superfamily YP_RS17995 IPR001927 Sodium:galactoside symporter YP_RS17995 IPR020846 Major facilitator superfamily domain YP_RS18000 IPR000531 TonB-dependent receptor, beta-barrel YP_RS18000 IPR010105 TonB-dependent siderophore receptor YP_RS18000 IPR010917 TonB-dependent receptor, conserved site YP_RS18000 IPR012910 TonB-dependent receptor, plug YP_RS18005 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS18005 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YP_RS18010 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YP_RS18010 IPR022770 Ferric iron reductase FhuF domain YP_RS18015 IPR016181 Acyl-CoA N-acyltransferase YP_RS18015 IPR019432 Siderophore biosynthesis protein, conserved domain YP_RS18020 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YP_RS18020 IPR022770 Ferric iron reductase FhuF domain YP_RS18025 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YP_RS18030 IPR011701 Major facilitator superfamily YP_RS18030 IPR020846 Major facilitator superfamily domain YP_RS18035 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal YP_RS18035 IPR015889 Intradiol ring-cleavage dioxygenase, core YP_RS18040 IPR010126 Esterase, PHB depolymerase YP_RS18040 IPR029058 Alpha/Beta hydrolase fold YP_RS18045 IPR000792 Transcription regulator LuxR, C-terminal YP_RS18045 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YP_RS18045 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS18045 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS18050 IPR001690 Autoinducer synthesis protein YP_RS18050 IPR016181 Acyl-CoA N-acyltransferase YP_RS18050 IPR018311 Autoinducer synthesis, conserved site YP_RS18055 IPR003675 CAAX amino terminal protease YP_RS18065 IPR003220 InsA N-terminal domain YP_RS18065 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YP_RS18080 IPR008312 Uncharacterised conserved protein UCP028301 YP_RS18085 IPR010269 Protein of unknown function DUF877 YP_RS18090 IPR010263 Protein of unknown function DUF876 YP_RS18095 IPR017732 Type IV / VI secretion system, DotU YP_RS18100 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS18105 IPR008514 Type VI secretion system effector, Hcp YP_RS18110 IPR001270 ClpA/B family YP_RS18110 IPR003593 AAA+ ATPase domain YP_RS18110 IPR003959 ATPase, AAA-type, core YP_RS18110 IPR004176 Clp, N-terminal YP_RS18110 IPR017729 Type VI secretion system, ATPase ClpV1 YP_RS18110 IPR018368 ClpA/B, conserved site 1 YP_RS18110 IPR019489 Clp ATPase, C-terminal YP_RS18110 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18115 IPR006531 Gp5 N-terminal YP_RS18115 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YP_RS18115 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YP_RS18115 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YP_RS18115 IPR027440 Capsid protein alpha-like domain YP_RS18115 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YP_RS18120 IPR023346 Lysozyme-like domain YP_RS18135 IPR003220 InsA N-terminal domain YP_RS18135 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YP_RS18140 IPR005063 Transposase, IS1 YP_RS18145 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YP_RS18150 IPR011055 Duplicated hybrid motif YP_RS18150 IPR016047 Peptidase M23 YP_RS18150 IPR023346 Lysozyme-like domain YP_RS18160 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YP_RS18165 IPR005063 Transposase, IS1 YP_RS18175 IPR002104 Integrase, catalytic YP_RS18175 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS18175 IPR013762 Integrase-like, catalytic core YP_RS18185 IPR000310 Orn/Lys/Arg decarboxylase, major domain YP_RS18185 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YP_RS18185 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YP_RS18185 IPR011006 CheY-like superfamily YP_RS18185 IPR011193 Ornithine/lysine/arginine decarboxylase YP_RS18185 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS18185 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS18185 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS18185 IPR027464 Ornithine decarboxylase, N-terminal domain YP_RS18185 IPR027568 Ornithine decarboxylase SpeF YP_RS18190 IPR025997 Periplasmic binding protein domain YP_RS18190 IPR028082 Periplasmic binding protein-like I YP_RS18195 IPR003439 ABC transporter-like YP_RS18195 IPR003593 AAA+ ATPase domain YP_RS18195 IPR017871 ABC transporter, conserved site YP_RS18195 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18200 IPR001851 ABC transporter, permease YP_RS18205 IPR000531 TonB-dependent receptor, beta-barrel YP_RS18205 IPR010105 TonB-dependent siderophore receptor YP_RS18205 IPR012910 TonB-dependent receptor, plug YP_RS18210 IPR002491 ABC transporter periplasmic binding domain YP_RS18215 IPR000189 Prokaryotic transglycosylase, active site YP_RS18215 IPR008258 Lytic transglycosylase-like SLT domain YP_RS18215 IPR023346 Lysozyme-like domain YP_RS18215 IPR023664 Murein transglycosylase-C YP_RS18215 IPR024570 Murein transglycosylase-C, N-terminal YP_RS18220 IPR007457 Fe(II) trafficking protein YggX YP_RS18225 IPR000445 Helix-hairpin-helix motif YP_RS18225 IPR003265 HhH-GPD domain YP_RS18225 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YP_RS18225 IPR004035 Endonuclease III, iron-sulphur binding site YP_RS18225 IPR004036 Endonuclease III-like, conserved site-2 YP_RS18225 IPR005760 A/G-specific adenine glycosylase MutY YP_RS18225 IPR011257 DNA glycosylase YP_RS18225 IPR015797 NUDIX hydrolase domain-like YP_RS18225 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YP_RS18225 IPR029119 MutY, C-terminal YP_RS18230 IPR003358 tRNA (guanine-N-7) methyltransferase YP_RS18230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS18235 IPR007416 Protein of unknown function DUF469 YP_RS18240 IPR012338 Beta-lactamase/transpeptidase-like YP_RS18240 IPR015868 Glutaminase YP_RS18245 IPR021307 Protein of unknown function DUF2884 YP_RS18250 IPR021307 Protein of unknown function DUF2884 YP_RS18255 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS18255 IPR020974 Peptidase C80, RTX cysteine protease domain YP_RS18260 IPR001207 Transposase, mutator type YP_RS18265 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related YP_RS18265 IPR006638 Elongator protein 3/MiaB/NifB YP_RS18265 IPR007197 Radical SAM YP_RS18265 IPR010723 HemN, C-terminal domain YP_RS18265 IPR023404 Radical SAM, alpha/beta horseshoe YP_RS18270 IPR002637 Ham1-like protein YP_RS18270 IPR020922 Non-canonical purine NTP pyrophosphatase YP_RS18270 IPR029001 Inosine triphosphate pyrophosphatase-like YP_RS18275 IPR003746 Protein of unknown function DUF167 YP_RS18275 IPR005228 Conserved hypothetical protein CHP00251 YP_RS18280 IPR003425 Uncharacterised protein family Ycf19 YP_RS18285 IPR000304 Pyrroline-5-carboxylate reductase YP_RS18285 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS18285 IPR016040 NAD(P)-binding domain YP_RS18285 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YP_RS18285 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YP_RS18290 IPR001608 Alanine racemase, N-terminal YP_RS18290 IPR011078 Uncharacterised protein family UPF0001 YP_RS18290 IPR029066 PLP-binding barrel YP_RS18295 IPR001482 Type II secretion system protein E YP_RS18295 IPR003593 AAA+ ATPase domain YP_RS18295 IPR006321 Pilus retraction protein PilT YP_RS18295 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18300 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YP_RS18300 IPR017754 Agmatine deiminase YP_RS18305 IPR003010 Carbon-nitrogen hydrolase YP_RS18305 IPR017755 N-carbamoylputrescine amidase YP_RS18310 IPR005227 Resolvase, holliday junction-type, YqgF-like YP_RS18310 IPR006641 YqgF/RNase H-like domain YP_RS18310 IPR012337 Ribonuclease H-like domain YP_RS18315 IPR003774 Protein of unknown function UPF0301 YP_RS18320 IPR004215 Prokaryotic glutathione synthetase, N-terminal YP_RS18320 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YP_RS18320 IPR006284 Glutathione synthetase, prokaryotic YP_RS18320 IPR013815 ATP-grasp fold, subdomain 1 YP_RS18320 IPR013816 ATP-grasp fold, subdomain 2 YP_RS18320 IPR016185 Pre-ATP-grasp domain YP_RS18325 IPR006700 Ribosomal RNA small subunit methyltransferase E YP_RS18325 IPR015947 PUA-like domain YP_RS18325 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS18325 IPR029028 Alpha/beta knot methyltransferases YP_RS18330 IPR007346 Endonuclease I YP_RS18335 IPR006640 Domain of unknown function SprT-like YP_RS18335 IPR023483 Uncharacterised protein family SprT YP_RS18340 IPR002133 S-adenosylmethionine synthetase YP_RS18340 IPR022628 S-adenosylmethionine synthetase, N-terminal YP_RS18340 IPR022629 S-adenosylmethionine synthetase, central domain YP_RS18340 IPR022630 S-adenosylmethionine synthetase, C-terminal YP_RS18340 IPR022631 S-adenosylmethionine synthetase, conserved site YP_RS18340 IPR022636 S-adenosylmethionine synthetase superfamily YP_RS18345 IPR000183 Ornithine/DAP/Arg decarboxylase YP_RS18345 IPR002985 Arginine decarboxylase YP_RS18345 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YP_RS18345 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YP_RS18345 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YP_RS18345 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YP_RS18345 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YP_RS18345 IPR029066 PLP-binding barrel YP_RS18350 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YP_RS18355 IPR001915 Peptidase M48 YP_RS18360 IPR005474 Transketolase, N-terminal YP_RS18360 IPR005475 Transketolase-like, pyrimidine-binding domain YP_RS18360 IPR005478 Transketolase, bacterial-like YP_RS18360 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YP_RS18360 IPR020826 Transketolase binding site YP_RS18360 IPR029061 Thiamin diphosphate-binding fold YP_RS18360 IPR033247 YP_RS18360 YP_RS18360 IPR033248 YP_RS18360 YP_RS18365 IPR002686 Transposase IS200-like YP_RS18370 IPR006422 D-erythrose-4-phosphate dehydrogenase YP_RS18370 IPR016040 NAD(P)-binding domain YP_RS18370 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YP_RS18370 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_RS18370 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YP_RS18370 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YP_RS18375 IPR001576 Phosphoglycerate kinase YP_RS18375 IPR015824 Phosphoglycerate kinase, N-terminal YP_RS18375 IPR015901 Phosphoglycerate kinase, C-terminal YP_RS18375 IPR015911 Phosphoglycerate kinase, conserved site YP_RS18380 IPR000771 Ketose-bisphosphate aldolase, class-II YP_RS18380 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YP_RS18380 IPR013785 Aldolase-type TIM barrel YP_RS18390 IPR006685 Mechanosensitive ion channel MscS YP_RS18390 IPR006686 Mechanosensitive ion channel MscS, conserved site YP_RS18390 IPR008910 Conserved TM helix YP_RS18390 IPR010920 Like-Sm (LSM) domain YP_RS18390 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YP_RS18390 IPR011066 Mechanosensitive ion channel MscS, C-terminal YP_RS18395 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YP_RS18400 IPR001270 ClpA/B family YP_RS18400 IPR002611 IstB-like ATP-binding protein YP_RS18400 IPR003593 AAA+ ATPase domain YP_RS18400 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18400 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS18405 IPR001584 Integrase, catalytic core YP_RS18405 IPR006120 Resolvase, HTH domain YP_RS18405 IPR009057 Homeodomain-like YP_RS18405 IPR012337 Ribonuclease H-like domain YP_RS18410 IPR002686 Transposase IS200-like YP_RS18415 IPR000917 Sulfatase YP_RS18415 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS18415 IPR017850 Alkaline-phosphatase-like, core domain YP_RS18420 IPR001034 HTH DeoR N-terminal domain YP_RS18420 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS18420 IPR014036 DeoR C-terminal sensor domain YP_RS18425 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ YP_RS18425 IPR013785 Aldolase-type TIM barrel YP_RS18430 IPR001347 Sugar isomerase (SIS) YP_RS18430 IPR014180 Sugar isomerase, AgaS YP_RS18435 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YP_RS18435 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YP_RS18440 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YP_RS18445 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YP_RS18450 IPR004701 Phosphotransferase system, mannose-type IIA component YP_RS18455 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YP_RS18455 IPR006680 Amidohydrolase 1 YP_RS18455 IPR011059 Metal-dependent hydrolase, composite domain YP_RS18455 IPR032466 YP_RS18455 YP_RS18460 IPR002347 Glucose/ribitol dehydrogenase YP_RS18460 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YP_RS18460 IPR016040 NAD(P)-binding domain YP_RS18460 IPR020904 Short-chain dehydrogenase/reductase, conserved site YP_RS18465 IPR008928 Six-hairpin glycosidase-like YP_RS18465 IPR010905 Glycosyl hydrolase, family 88 YP_RS18465 IPR012341 Six-hairpin glycosidase YP_RS18470 IPR007197 Radical SAM YP_RS18470 IPR013785 Aldolase-type TIM barrel YP_RS18470 IPR023867 Anaerobic sulphatase maturase, radical SAM YP_RS18470 IPR023885 4Fe4S-binding SPASM domain YP_RS18475 IPR000917 Sulfatase YP_RS18475 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS18475 IPR017850 Alkaline-phosphatase-like, core domain YP_RS18475 IPR024607 Sulfatase, conserved site YP_RS18480 IPR016624 Uncharacterised conserved protein UCP014753 YP_RS18485 IPR000771 Ketose-bisphosphate aldolase, class-II YP_RS18485 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YP_RS18485 IPR013785 Aldolase-type TIM barrel YP_RS18490 IPR002818 ThiJ/PfpI YP_RS18490 IPR029062 Class I glutamine amidotransferase-like YP_RS18500 IPR000843 Transcription regulator HTH, LacI YP_RS18500 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS18500 IPR028082 Periplasmic binding protein-like I YP_RS18505 IPR011701 Major facilitator superfamily YP_RS18505 IPR020846 Major facilitator superfamily domain YP_RS18510 IPR000322 Glycoside hydrolase, family 31 YP_RS18510 IPR011013 Galactose mutarotase-like domain YP_RS18510 IPR017853 Glycoside hydrolase, superfamily YP_RS18510 IPR025887 Glycoside hydrolase family 31, N-terminal domain YP_RS18510 IPR033403 YP_RS18510 YP_RS18515 IPR000843 Transcription regulator HTH, LacI YP_RS18515 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS18515 IPR028082 Periplasmic binding protein-like I YP_RS18520 IPR003192 Porin, LamB type YP_RS18520 IPR023738 Maltoporin YP_RS18525 IPR001996 Phosphotransferase system, IIB component, type 1 YP_RS18525 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YP_RS18530 IPR003476 Glycoside hydrolase, family 42 YP_RS18530 IPR013529 Glycoside hydrolase, family 42, N-terminal YP_RS18530 IPR013738 Beta-galactosidase trimerisation YP_RS18530 IPR013739 Beta-galactosidase C-terminal YP_RS18530 IPR013781 Glycoside hydrolase, catalytic domain YP_RS18530 IPR017853 Glycoside hydrolase, superfamily YP_RS18530 IPR029062 Class I glutamine amidotransferase-like YP_RS18535 IPR011683 Glycosyl hydrolase family 53 YP_RS18535 IPR013781 Glycoside hydrolase, catalytic domain YP_RS18535 IPR017853 Glycoside hydrolase, superfamily YP_RS18540 IPR000515 MetI-like domain YP_RS18545 IPR000515 MetI-like domain YP_RS18550 IPR006060 Maltose binding protein YP_RS18555 IPR003439 ABC transporter-like YP_RS18555 IPR003593 AAA+ ATPase domain YP_RS18555 IPR008995 Molybdate/tungstate binding, C-terminal YP_RS18555 IPR012340 Nucleic acid-binding, OB-fold YP_RS18555 IPR013611 Transport-associated OB, type 2 YP_RS18555 IPR017871 ABC transporter, conserved site YP_RS18555 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18560 IPR003439 ABC transporter-like YP_RS18560 IPR003593 AAA+ ATPase domain YP_RS18560 IPR017871 ABC transporter, conserved site YP_RS18560 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18565 IPR001851 ABC transporter, permease YP_RS18570 IPR025997 Periplasmic binding protein domain YP_RS18570 IPR028082 Periplasmic binding protein-like I YP_RS18580 IPR024453 YP_RS18580 YP_RS18585 IPR005149 Transcription regulator PadR N-terminal YP_RS18585 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS18590 IPR024476 Protein of unknown function DUF3861 YP_RS18595 IPR008727 PAAR motif YP_RS18620 IPR015287 Colicin D immunity protein domain YP_RS18630 IPR025983 Cysteine-rich CPCC domain YP_RS18635 IPR008727 PAAR motif YP_RS18635 IPR016128 Pyosin/cloacin translocation domain YP_RS18640 IPR003812 Fido domain YP_RS18660 IPR009061 DNA binding domain, putative YP_RS18660 IPR010260 Bacteriophage P4, Orf88 YP_RS18670 IPR009241 Addiction module killer protein YP_RS18675 IPR002694 Zinc finger, CHC2-type YP_RS18675 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YP_RS18675 IPR006171 Toprim domain YP_RS18675 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS18675 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YP_RS18675 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YP_RS18675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18680 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS18680 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS18680 IPR022452 Zinc finger/helix-turn-helix protein, YgiT YP_RS18680 IPR022453 Zinc finger, YgiT-type YP_RS18680 IPR032758 YP_RS18680 YP_RS18685 IPR031451 YP_RS18685 YP_RS18690 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS18690 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS18695 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YP_RS18710 IPR002104 Integrase, catalytic YP_RS18710 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS18710 IPR013762 Integrase-like, catalytic core YP_RS18710 IPR023109 Integrase/recombinase, N-terminal YP_RS18710 IPR025166 Domain of unknown function DUF4102 YP_RS18720 IPR002313 Lysine-tRNA ligase, class II YP_RS18720 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YP_RS18720 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YP_RS18720 IPR012340 Nucleic acid-binding, OB-fold YP_RS18720 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YP_RS18720 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YP_RS18725 IPR000352 Peptide chain release factor class I/class II YP_RS18725 IPR004374 Peptide chain release factor 2 YP_RS18725 IPR005139 Peptide chain release factor YP_RS18725 IPR014720 Double-stranded RNA-binding domain YP_RS18730 IPR001667 DDH domain YP_RS18730 IPR003156 DHHA1 domain YP_RS18730 IPR004610 Bacterial RecJ exonuclease YP_RS18735 IPR009094 Disulphide bond isomerase, DsbC, N-terminal YP_RS18735 IPR012336 Thioredoxin-like fold YP_RS18735 IPR017937 Thioredoxin, conserved site YP_RS18735 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YP_RS18740 IPR002104 Integrase, catalytic YP_RS18740 IPR004107 Integrase, SAM-like, N-terminal YP_RS18740 IPR010998 Integrase, Lambda-type, N-terminal YP_RS18740 IPR011010 DNA breaking-rejoining enzyme, catalytic core YP_RS18740 IPR011932 Tyrosine recombinase XerD YP_RS18740 IPR013762 Integrase-like, catalytic core YP_RS18740 IPR023009 Tyrosine recombinase XerC/XerD YP_RS18740 IPR023109 Integrase/recombinase, N-terminal YP_RS18745 IPR001226 Flavodoxin, conserved site YP_RS18745 IPR008254 Flavodoxin/nitric oxide synthase YP_RS18745 IPR010086 Flavodoxin, long chain YP_RS18745 IPR029039 Flavoprotein-like YP_RS18750 IPR010364 Uncharacterised protein family, inner membrane CreD YP_RS18755 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS18755 IPR003660 HAMP linker domain YP_RS18755 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS18755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS18755 IPR029150 Sensory domain of two-component sensor kinase YP_RS18755 IPR029151 Periplasmic sensor domain-like YP_RS18760 IPR001789 Signal transduction response regulator, receiver domain YP_RS18760 IPR001867 Signal transduction response regulator, C-terminal YP_RS18760 IPR011006 CheY-like superfamily YP_RS18760 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS18760 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS18765 IPR009883 Protein of unknown function DUF1434 YP_RS18770 IPR005631 Flavinator of succinate dehydrogenase YP_RS18775 IPR006222 Glycine cleavage T-protein, N-terminal YP_RS18775 IPR017703 YgfZ/GcvT conserved site YP_RS18775 IPR023758 tRNA-modifying protein YgfZ YP_RS18775 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YP_RS18780 IPR018681 Protein of unknown function DUF2165, transmembrane YP_RS18785 IPR004254 Hly-III-related YP_RS18785 IPR005744 HylII YP_RS18795 IPR005594 YadA-like, C-terminal YP_RS18795 IPR008635 Coiled stalk of trimeric autotransporter adhesin YP_RS18795 IPR008640 Head domain of trimeric autotransporter adhesin YP_RS18795 IPR011049 Serralysin-like metalloprotease, C-terminal YP_RS18805 IPR024311 Lipocalin-like domain YP_RS18810 IPR003437 Glycine cleavage system P protein, homodimeric YP_RS18810 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS18810 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS18810 IPR020580 Glycine cleavage system P-protein, N-terminal YP_RS18810 IPR020581 Glycine cleavage system P protein YP_RS18815 IPR002930 Glycine cleavage system H-protein YP_RS18815 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YP_RS18815 IPR011053 Single hybrid motif YP_RS18815 IPR017453 Glycine cleavage system H-protein, subgroup YP_RS18820 IPR006222 Glycine cleavage T-protein, N-terminal YP_RS18820 IPR006223 Glycine cleavage system T protein YP_RS18820 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YP_RS18820 IPR022903 Glycine cleavage system T protein, bacteria YP_RS18820 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YP_RS18820 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA YP_RS18820 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YP_RS18825 IPR002938 Monooxygenase, FAD-binding YP_RS18825 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YP_RS18825 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YP_RS18825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS18830 IPR002938 Monooxygenase, FAD-binding YP_RS18830 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YP_RS18830 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YP_RS18830 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YP_RS18830 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS18835 IPR000994 Peptidase M24, structural domain YP_RS18835 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YP_RS18835 IPR001714 Peptidase M24, methionine aminopeptidase YP_RS18835 IPR007865 Aminopeptidase P, N-terminal YP_RS18835 IPR028980 Creatinase/Aminopeptidase P, N-terminal YP_RS18835 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YP_RS18840 IPR011978 Uncharacterised protein family UPF0149 YP_RS18845 IPR007838 Cell division protein ZapA-like YP_RS18845 IPR023771 Cell division protein ZapA, eubacteria YP_RS18850 IPR002698 5-formyltetrahydrofolate cyclo-ligase YP_RS18850 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain YP_RS18855 IPR002912 ACT domain YP_RS18855 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_RS18855 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YP_RS18855 IPR016040 NAD(P)-binding domain YP_RS18855 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 YP_RS18855 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YP_RS18855 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YP_RS18860 IPR004788 Ribose 5-phosphate isomerase, type A YP_RS18860 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YP_RS18865 IPR000847 Transcription regulator HTH, LysR YP_RS18865 IPR005119 LysR, substrate-binding YP_RS18865 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS18865 IPR017685 Transcription regulator ArgP YP_RS18865 IPR023490 Chromosome initiation inhibitor YP_RS18870 IPR007497 Protein of unknown function DUF541 YP_RS18875 IPR001584 Integrase, catalytic core YP_RS18875 IPR006120 Resolvase, HTH domain YP_RS18875 IPR009057 Homeodomain-like YP_RS18875 IPR012337 Ribonuclease H-like domain YP_RS18880 IPR001270 ClpA/B family YP_RS18880 IPR002611 IstB-like ATP-binding protein YP_RS18880 IPR003593 AAA+ ATPase domain YP_RS18880 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18880 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS18890 IPR000086 NUDIX hydrolase domain YP_RS18890 IPR003561 Mutator MutT YP_RS18890 IPR015797 NUDIX hydrolase domain-like YP_RS18890 IPR020084 NUDIX hydrolase, conserved site YP_RS18890 IPR020476 NUDIX hydrolase YP_RS18895 IPR000185 Protein translocase subunit SecA YP_RS18895 IPR004027 SEC-C motif YP_RS18895 IPR011115 SecA DEAD-like, N-terminal YP_RS18895 IPR011116 SecA Wing/Scaffold YP_RS18895 IPR011130 SecA preprotein, cross-linking domain YP_RS18895 IPR020937 SecA conserved site YP_RS18895 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS18900 IPR009502 Secretion monitor YP_RS18905 IPR007922 Protein of unknown function DUF721/UPF0232 YP_RS18910 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YP_RS18910 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YP_RS18910 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YP_RS18910 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS18915 IPR000158 Cell division protein FtsZ YP_RS18915 IPR003008 Tubulin/FtsZ, GTPase domain YP_RS18915 IPR008280 Tubulin/FtsZ, C-terminal YP_RS18915 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YP_RS18915 IPR020805 Cell division protein FtsZ, conserved site YP_RS18915 IPR024757 Cell division protein FtsZ, C-terminal YP_RS18920 IPR003494 SHS2 domain inserted in FtsA YP_RS18920 IPR020823 Cell division protein FtsA YP_RS18925 IPR005548 Cell division protein FtsQ/DivIB YP_RS18925 IPR013685 Polypeptide-transport-associated, FtsQ-type YP_RS18925 IPR026579 Cell division protein FtsQ YP_RS18930 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YP_RS18930 IPR005905 D-alanine--D-alanine ligase YP_RS18930 IPR011095 D-alanine--D-alanine ligase, C-terminal YP_RS18930 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YP_RS18930 IPR013815 ATP-grasp fold, subdomain 1 YP_RS18930 IPR013816 ATP-grasp fold, subdomain 2 YP_RS18930 IPR016185 Pre-ATP-grasp domain YP_RS18935 IPR000713 Mur ligase, N-terminal YP_RS18935 IPR004101 Mur ligase, C-terminal YP_RS18935 IPR005758 UDP-N-acetylmuramate-alanine ligase YP_RS18935 IPR013221 Mur ligase, central YP_RS18935 IPR016040 NAD(P)-binding domain YP_RS18940 IPR004276 Glycosyl transferase, family 28 YP_RS18940 IPR006009 N-acetylglucosaminyltransferase, MurG YP_RS18940 IPR007235 Glycosyl transferase, family 28, C-terminal YP_RS18945 IPR001182 Cell cycle protein FtsW/RodA YP_RS18945 IPR013437 Cell division protein FtsW YP_RS18945 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YP_RS18950 IPR004101 Mur ligase, C-terminal YP_RS18950 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_RS18950 IPR013221 Mur ligase, central YP_RS18950 IPR016040 NAD(P)-binding domain YP_RS18955 IPR000715 Glycosyl transferase, family 4 YP_RS18955 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YP_RS18955 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_RS18960 IPR000713 Mur ligase, N-terminal YP_RS18960 IPR004101 Mur ligase, C-terminal YP_RS18960 IPR005863 UDP-MurNAc-pentapeptide synthetase YP_RS18960 IPR013221 Mur ligase, central YP_RS18965 IPR000713 Mur ligase, N-terminal YP_RS18965 IPR004101 Mur ligase, C-terminal YP_RS18965 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YP_RS18965 IPR013221 Mur ligase, central YP_RS18970 IPR001460 Penicillin-binding protein, transpeptidase YP_RS18970 IPR005311 Penicillin-binding protein, dimerisation domain YP_RS18970 IPR012338 Beta-lactamase/transpeptidase-like YP_RS18975 IPR011922 Cell division protein FtsL YP_RS18980 IPR002903 Ribosomal RNA small subunit methyltransferase H YP_RS18980 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain YP_RS18980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS18985 IPR003444 MraZ YP_RS18985 IPR020603 MraZ domain YP_RS18990 IPR010574 L-alanine exporter AlaE YP_RS18995 IPR000843 Transcription regulator HTH, LacI YP_RS18995 IPR001761 Periplasmic binding protein/LacI sugar binding domain YP_RS18995 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS18995 IPR012781 D-fructose-responsive transcription factor YP_RS18995 IPR028082 Periplasmic binding protein-like I YP_RS19005 IPR002686 Transposase IS200-like YP_RS19020 IPR000847 Transcription regulator HTH, LysR YP_RS19020 IPR005119 LysR, substrate-binding YP_RS19020 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS19030 IPR000873 AMP-dependent synthetase/ligase YP_RS19030 IPR020845 AMP-binding, conserved site YP_RS19040 IPR000399 TPP-binding enzyme, conserved site YP_RS19040 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_RS19040 IPR012000 Thiamine pyrophosphate enzyme, central domain YP_RS19040 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YP_RS19040 IPR012846 Acetolactate synthase, large subunit, biosynthetic YP_RS19040 IPR029035 DHS-like NAD/FAD-binding domain YP_RS19040 IPR029061 Thiamin diphosphate-binding fold YP_RS19045 IPR002912 ACT domain YP_RS19045 IPR004789 Acetolactate synthase, small subunit YP_RS19045 IPR019455 Acetolactate synthase, small subunit, C-terminal YP_RS19050 IPR002686 Transposase IS200-like YP_RS19055 IPR000891 Pyruvate carboxyltransferase YP_RS19055 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YP_RS19055 IPR005671 2-isopropylmalate synthase, bacterial-type YP_RS19055 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YP_RS19055 IPR013785 Aldolase-type TIM barrel YP_RS19060 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YP_RS19060 IPR004429 Isopropylmalate dehydrogenase YP_RS19060 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YP_RS19060 IPR024084 Isopropylmalate dehydrogenase-like domain YP_RS19065 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_RS19065 IPR004430 3-isopropylmalate dehydratase, large subunit YP_RS19065 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YP_RS19065 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YP_RS19065 IPR015937 Aconitase/isopropylmalate dehydratase YP_RS19065 IPR018136 Aconitase family, 4Fe-4S cluster binding site YP_RS19070 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_RS19070 IPR004431 3-isopropylmalate dehydratase, small subunit YP_RS19070 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YP_RS19070 IPR015937 Aconitase/isopropylmalate dehydratase YP_RS19075 IPR004750 Sugar efflux YP_RS19075 IPR011701 Major facilitator superfamily YP_RS19075 IPR020846 Major facilitator superfamily domain YP_RS19085 IPR000914 Bacterial extracellular solute-binding protein, family 5 YP_RS19085 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS19085 IPR023767 Transcriptional regulator SgrR YP_RS19085 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YP_RS19095 IPR005948 Thiamine ABC transporter periplasmic binding protein YP_RS19095 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein YP_RS19100 IPR000515 MetI-like domain YP_RS19100 IPR005947 Thiamine ABC transporter, permease protein YP_RS19105 IPR003439 ABC transporter-like YP_RS19105 IPR003593 AAA+ ATPase domain YP_RS19105 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YP_RS19105 IPR017871 ABC transporter, conserved site YP_RS19105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19110 IPR032816 YP_RS19110 YP_RS19110 IPR032818 YP_RS19110 YP_RS19115 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YP_RS19115 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YP_RS19115 IPR006172 DNA-directed DNA polymerase, family B YP_RS19115 IPR012337 Ribonuclease H-like domain YP_RS19115 IPR017964 DNA-directed DNA polymerase, family B, conserved site YP_RS19115 IPR023211 DNA polymerase, palm domain YP_RS19120 IPR000330 SNF2-related YP_RS19120 IPR001650 Helicase, C-terminal YP_RS19120 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YP_RS19120 IPR022737 RNA polymerase recycling, bacterial, C-terminal YP_RS19120 IPR023949 RNA polymerase-associated protein RapA YP_RS19120 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19130 IPR009612 ImcF-related YP_RS19130 IPR010623 Domain of unknown function DUF1215 YP_RS19130 IPR017731 Type VI secretion system, IcmF YP_RS19130 IPR025743 ImcF-related, N-terminal domain YP_RS19130 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19135 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS19135 IPR017732 Type IV / VI secretion system, DotU YP_RS19140 IPR010263 Protein of unknown function DUF876 YP_RS19145 IPR017734 Type VI secretion system, lipoprotein SciN YP_RS19150 IPR025425 Domain of unknown function DUF4150 YP_RS19155 IPR021927 Protein of unknown function DUF3540 YP_RS19160 IPR001646 Pentapeptide repeat YP_RS19160 IPR012334 Pectin lyase fold YP_RS19165 IPR001646 Pentapeptide repeat YP_RS19165 IPR012334 Pectin lyase fold YP_RS19165 IPR018683 Domain of unknown function DUF2169 YP_RS19170 IPR006531 Gp5 N-terminal YP_RS19170 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YP_RS19170 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YP_RS19175 IPR001270 ClpA/B family YP_RS19175 IPR003593 AAA+ ATPase domain YP_RS19175 IPR003959 ATPase, AAA-type, core YP_RS19175 IPR004176 Clp, N-terminal YP_RS19175 IPR017729 Type VI secretion system, ATPase ClpV1 YP_RS19175 IPR019489 Clp ATPase, C-terminal YP_RS19175 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19180 IPR010732 Protein of unknown function DUF1305 YP_RS19185 IPR010272 Type VI secretion system, VCA0110 YP_RS19190 IPR007048 GpW/Gp25/anti-adapter protein IraD YP_RS19195 IPR008514 Type VI secretion system effector, Hcp YP_RS19200 IPR010269 Protein of unknown function DUF877 YP_RS19205 IPR008312 Uncharacterised conserved protein UCP028301 YP_RS19210 IPR010657 ImpA, N-terminal YP_RS19215 IPR018754 Protein of unknown function DUF2285 YP_RS19220 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YP_RS19220 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YP_RS19220 IPR020103 Pseudouridine synthase, catalytic domain YP_RS19225 IPR001623 DnaJ domain YP_RS19225 IPR007791 Heat shock protein DnaJ-like protein DjlA YP_RS19225 IPR023749 DnaJ-like protein DjlA YP_RS19225 IPR029024 TerB-like YP_RS19230 IPR005653 Organic solvent tolerance-like, N-terminal YP_RS19230 IPR007543 Organic solvent tolerance protein, C-terminal YP_RS19230 IPR020889 Lipopolysaccharide assembly, LptD YP_RS19235 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YP_RS19235 IPR008880 Trigger factor, C-terminal domain YP_RS19235 IPR015391 SurA N-terminal YP_RS19235 IPR023034 Peptidyl-prolyl isomerase SurA YP_RS19235 IPR027304 Trigger factor/SurA domain YP_RS19240 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA YP_RS19240 IPR024084 Isopropylmalate dehydrogenase-like domain YP_RS19245 IPR001737 Ribosomal RNA adenine methylase transferase YP_RS19245 IPR011530 Ribosomal RNA adenine dimethylase YP_RS19245 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YP_RS19245 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YP_RS19245 IPR023165 rRNA adenine dimethylase-like YP_RS19245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS19250 IPR007474 ApaG domain YP_RS19250 IPR023065 Uncharacterised protein family ApaG YP_RS19255 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_RS19255 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YP_RS19255 IPR029052 Metallo-dependent phosphatase-like YP_RS19260 IPR022231 Protein of unknown function DUF3757 YP_RS19265 IPR022231 Protein of unknown function DUF3757 YP_RS19275 IPR001796 Dihydrofolate reductase domain YP_RS19275 IPR012259 Dihydrofolate reductase YP_RS19275 IPR017925 Dihydrofolate reductase conserved site YP_RS19275 IPR024072 Dihydrofolate reductase-like domain YP_RS19280 IPR024528 Domain of unknown function DUF3815 YP_RS19285 IPR010619 Domain of unknown function DUF1212 YP_RS19290 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YP_RS19295 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YP_RS19295 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YP_RS19295 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YP_RS19295 IPR006275 Carbamoyl-phosphate synthase, large subunit YP_RS19295 IPR011607 Methylglyoxal synthase-like domain YP_RS19295 IPR013815 ATP-grasp fold, subdomain 1 YP_RS19295 IPR013816 ATP-grasp fold, subdomain 2 YP_RS19295 IPR016185 Pre-ATP-grasp domain YP_RS19300 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain YP_RS19300 IPR006274 Carbamoyl-phosphate synthase, small subunit YP_RS19300 IPR017926 Glutamine amidotransferase YP_RS19300 IPR029062 Class I glutamine amidotransferase-like YP_RS19305 IPR000846 Dihydrodipicolinate reductase, N-terminal YP_RS19305 IPR016040 NAD(P)-binding domain YP_RS19305 IPR022663 Dihydrodipicolinate reductase, C-terminal YP_RS19305 IPR022664 Dihydrodipicolinate reductase, conserved site YP_RS19305 IPR023940 Dihydrodipicolinate reductase, bacterial YP_RS19310 IPR002686 Transposase IS200-like YP_RS19325 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_RS19330 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YP_RS19330 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YP_RS19335 IPR001872 Peptidase A8, signal peptidase II YP_RS19340 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YP_RS19340 IPR002300 Aminoacyl-tRNA synthetase, class Ia YP_RS19340 IPR002301 Isoleucine-tRNA ligase YP_RS19340 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YP_RS19340 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YP_RS19340 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YP_RS19340 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YP_RS19340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS19340 IPR023585 Isoleucine-tRNA ligase, type 1 YP_RS19345 IPR002606 Riboflavin kinase, bacterial YP_RS19345 IPR004821 Cytidyltransferase-like domain YP_RS19345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS19345 IPR015864 FAD synthetase YP_RS19345 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YP_RS19345 IPR023465 Riboflavin kinase domain YP_RS19345 IPR023468 Riboflavin kinase YP_RS19355 IPR002583 Ribosomal protein S20 YP_RS19360 IPR000847 Transcription regulator HTH, LysR YP_RS19360 IPR005119 LysR, substrate-binding YP_RS19360 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS19365 IPR004670 Na+/H+ antiporter NhaA YP_RS19365 IPR023171 Na/H antiporter domain YP_RS19370 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YP_RS19370 IPR001623 DnaJ domain YP_RS19370 IPR002939 Chaperone DnaJ, C-terminal YP_RS19370 IPR008971 HSP40/DnaJ peptide-binding YP_RS19370 IPR012724 Chaperone DnaJ YP_RS19370 IPR018253 DnaJ domain, conserved site YP_RS19375 IPR012725 Chaperone DnaK YP_RS19375 IPR013126 Heat shock protein 70 family YP_RS19375 IPR018181 Heat shock protein 70, conserved site YP_RS19375 IPR029047 Heat shock protein 70kD, peptide-binding domain YP_RS19375 IPR029048 Heat shock protein 70kD, C-terminal domain YP_RS19385 IPR011024 Gamma-crystallin-related YP_RS19385 IPR016181 Acyl-CoA N-acyltransferase YP_RS19390 IPR011701 Major facilitator superfamily YP_RS19390 IPR020846 Major facilitator superfamily domain YP_RS19395 IPR001453 Molybdopterin binding domain YP_RS19395 IPR008284 Molybdenum cofactor biosynthesis, conserved site YP_RS19400 IPR001585 Transaldolase YP_RS19400 IPR004730 Transaldolase type 1 YP_RS19400 IPR013785 Aldolase-type TIM barrel YP_RS19400 IPR018225 Transaldolase, active site YP_RS19405 IPR005583 Uncharacterised protein family UPF0246 YP_RS19410 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YP_RS19410 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS19410 IPR004450 Threonine synthase-like YP_RS19410 IPR029144 Threonine synthase, N-terminal YP_RS19415 IPR000870 Homoserine kinase YP_RS19415 IPR006203 GHMP kinase, ATP-binding, conserved site YP_RS19415 IPR006204 GHMP kinase N-terminal domain YP_RS19415 IPR013750 GHMP kinase, C-terminal domain YP_RS19415 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS19415 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS19420 IPR001048 Aspartate/glutamate/uridylate kinase YP_RS19420 IPR001341 Aspartate kinase domain YP_RS19420 IPR001342 Homoserine dehydrogenase, catalytic YP_RS19420 IPR002912 ACT domain YP_RS19420 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YP_RS19420 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YP_RS19420 IPR016040 NAD(P)-binding domain YP_RS19420 IPR018042 Aspartate kinase, conserved site YP_RS19420 IPR019811 Homoserine dehydrogenase, conserved site YP_RS19420 IPR027795 GATS-like ACT domain YP_RS19425 IPR001789 Signal transduction response regulator, receiver domain YP_RS19425 IPR001867 Signal transduction response regulator, C-terminal YP_RS19425 IPR011006 CheY-like superfamily YP_RS19425 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS19425 IPR016032 Signal transduction response regulator, C-terminal effector YP_RS19430 IPR010292 Uncharacterised protein family CreA YP_RS19435 IPR009057 Homeodomain-like YP_RS19435 IPR010499 Bacterial transcription activator, effector binding YP_RS19435 IPR011256 Regulatory factor, effector binding domain YP_RS19435 IPR018060 DNA binding HTH domain, AraC-type YP_RS19435 IPR018062 HTH domain AraC-type, conserved site YP_RS19435 IPR020449 Transcription regulator HTH, AraC- type YP_RS19435 IPR029442 GyrI-like small molecule binding domain YP_RS19440 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YP_RS19440 IPR013078 Histidine phosphatase superfamily, clade-1 YP_RS19440 IPR023086 Phosphoglycerate mutase, GpmB, probable YP_RS19440 IPR029033 Histidine phosphatase superfamily YP_RS19445 IPR002786 Non-canonical purine NTP phosphatase YP_RS19445 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YP_RS19445 IPR029001 Inosine triphosphate pyrophosphatase-like YP_RS19450 IPR000831 Trp repressor YP_RS19450 IPR010921 Trp repressor/replication initiator YP_RS19450 IPR013335 Trp repressor, bacterial YP_RS19455 IPR000189 Prokaryotic transglycosylase, active site YP_RS19455 IPR008258 Lytic transglycosylase-like SLT domain YP_RS19455 IPR008939 Lytic transglycosylase, superhelical U-shaped YP_RS19455 IPR012289 Lytic transglycosylase, superhelical linker YP_RS19455 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain YP_RS19455 IPR023346 Lysozyme-like domain YP_RS19460 IPR001757 Cation-transporting P-type ATPase YP_RS19460 IPR004014 Cation-transporting P-type ATPase, N-terminal YP_RS19460 IPR006068 Cation-transporting P-type ATPase, C-terminal YP_RS19460 IPR008250 P-type ATPase, A domain YP_RS19460 IPR018303 P-type ATPase, phosphorylation site YP_RS19460 IPR023214 HAD-like domain YP_RS19460 IPR023298 P-type ATPase, transmembrane domain YP_RS19460 IPR023299 P-type ATPase, cytoplasmic domain N YP_RS19465 IPR025293 Protein of unknown function DUF4154 YP_RS19470 IPR000160 GGDEF domain YP_RS19470 IPR029787 Nucleotide cyclase YP_RS19470 IPR033417 YP_RS19470 YP_RS19475 IPR006664 Outer membrane protein, bacterial YP_RS19475 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS19480 IPR003439 ABC transporter-like YP_RS19480 IPR003593 AAA+ ATPase domain YP_RS19480 IPR017871 ABC transporter, conserved site YP_RS19480 IPR022374 ABC transporter, ATP-binding protein, ChvD YP_RS19480 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19480 IPR032781 YP_RS19480 YP_RS19485 IPR003812 Fido domain YP_RS19485 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS19485 IPR025230 Domain of unknown function DUF4172 YP_RS19490 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS19490 IPR004821 Cytidyltransferase-like domain YP_RS19490 IPR006417 Nicotinamide-nucleotide adenylyltransferase YP_RS19490 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS19490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YP_RS19490 IPR016429 Bifunctional transcriptional regulator NadR YP_RS19490 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19495 IPR003593 AAA+ ATPase domain YP_RS19495 IPR004504 DNA repair protein RadA YP_RS19495 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS19495 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS19495 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19500 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like YP_RS19500 IPR023190 Phosphoserine phosphatase, domain 2 YP_RS19500 IPR023214 HAD-like domain YP_RS19505 IPR019305 Uncharacterised protein family Smp YP_RS19510 IPR000845 Nucleoside phosphorylase domain YP_RS19510 IPR004402 Purine nucleoside phosphorylase DeoD-type YP_RS19510 IPR018016 Nucleoside phosphorylase, conserved site YP_RS19510 IPR018017 Nucleoside phosphorylase YP_RS19515 IPR006124 Metalloenzyme YP_RS19515 IPR010045 Phosphopentomutase YP_RS19515 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YP_RS19515 IPR017850 Alkaline-phosphatase-like, core domain YP_RS19515 IPR024052 Phosphopentomutase DeoB cap domain YP_RS19520 IPR000053 Pyrimidine-nucleoside phosphorylase YP_RS19520 IPR000312 Glycosyl transferase, family 3 YP_RS19520 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal YP_RS19520 IPR013465 Thymidine phosphorylase YP_RS19520 IPR017459 Glycosyl transferase family 3, N-terminal domain YP_RS19520 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site YP_RS19520 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic YP_RS19525 IPR002915 DeoC/FbaB/ lacD aldolase YP_RS19525 IPR011343 Deoxyribose-phosphate aldolase YP_RS19525 IPR013785 Aldolase-type TIM barrel YP_RS19525 IPR023649 Deoxyribose-phosphate aldolase type II YP_RS19530 IPR002668 Concentrative nucleoside transporter N-terminal domain YP_RS19530 IPR008276 Concentrative nucleoside transporter YP_RS19530 IPR011642 Nucleoside recognition Gate YP_RS19530 IPR011657 Concentrative nucleoside transporter C-terminal domain YP_RS19530 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YP_RS19535 IPR001130 TatD family YP_RS19535 IPR018228 Deoxyribonuclease, TatD-related, conserved site YP_RS19535 IPR032466 YP_RS19535 YP_RS19540 IPR002641 Patatin/Phospholipase A2-related YP_RS19540 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YP_RS19545 IPR009760 Protein of unknown function DUF1328 YP_RS19550 IPR007055 BON domain YP_RS19550 IPR014004 Transport-associated and nodulation domain, bacteria YP_RS19555 IPR000795 Elongation factor, GTP-binding domain YP_RS19555 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YP_RS19555 IPR004548 Peptide chain release factor 3 YP_RS19555 IPR005225 Small GTP-binding protein domain YP_RS19555 IPR009000 Translation protein, beta-barrel domain YP_RS19555 IPR009022 Elongation factor G, III-V domain YP_RS19555 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19555 IPR031157 YP_RS19555 YP_RS19555 IPR032090 YP_RS19555 YP_RS19560 IPR000182 GNAT domain YP_RS19560 IPR006464 Ribosomal-protein-alanine acetyltransferase YP_RS19560 IPR016181 Acyl-CoA N-acyltransferase YP_RS19565 IPR004615 DNA polymerase III, psi subunit YP_RS19570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YP_RS19570 IPR007848 Methyltransferase small domain YP_RS19570 IPR013675 Methyltransferase small, N-terminal YP_RS19570 IPR023543 rRNA small subunit methyltransferase C YP_RS19570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS19580 IPR009885 Protein of unknown function DUF1435 YP_RS19585 IPR000160 GGDEF domain YP_RS19585 IPR029787 Nucleotide cyclase YP_RS19590 IPR000070 Pectinesterase, catalytic YP_RS19590 IPR011050 Pectin lyase fold/virulence factor YP_RS19590 IPR012334 Pectin lyase fold YP_RS19610 IPR001036 Acriflavin resistance protein YP_RS19610 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YP_RS19615 IPR003997 RTX secretion protein D, Gram-negative bacteria YP_RS19615 IPR006143 RND efflux pump, membrane fusion protein YP_RS19615 IPR032317 YP_RS19615 YP_RS19620 IPR010445 Protein of unknown function DUF1049 YP_RS19630 IPR007016 O-antigen ligase-related YP_RS19635 IPR002201 Glycosyl transferase, family 9 YP_RS19635 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YP_RS19640 IPR000577 YP_RS19640 YP_RS19640 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS19640 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS19645 IPR007324 Sugar-binding domain, putative YP_RS19645 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS19655 IPR003439 ABC transporter-like YP_RS19655 IPR003593 AAA+ ATPase domain YP_RS19655 IPR017871 ABC transporter, conserved site YP_RS19655 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19655 IPR030281 YP_RS19655 YP_RS19660 IPR001851 ABC transporter, permease YP_RS19665 IPR001851 ABC transporter, permease YP_RS19670 IPR025997 Periplasmic binding protein domain YP_RS19670 IPR028082 Periplasmic binding protein-like I YP_RS19670 IPR030159 YP_RS19670 YP_RS19675 IPR002915 DeoC/FbaB/ lacD aldolase YP_RS19675 IPR013785 Aldolase-type TIM barrel YP_RS19680 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YP_RS19680 IPR011008 Dimeric alpha-beta barrel YP_RS19685 IPR019637 Protein of unknown function DUF2501 YP_RS19690 IPR000032 Phosphocarrier HPr protein-like YP_RS19690 IPR000121 PEP-utilising enzyme, C-terminal YP_RS19690 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YP_RS19690 IPR002178 PTS EIIA type-2 domain YP_RS19690 IPR006318 Phosphoenolpyruvate-utilising enzyme YP_RS19690 IPR008279 PEP-utilising enzyme, mobile domain YP_RS19690 IPR008731 Phosphotransferase system, enzyme I N-terminal YP_RS19690 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YP_RS19690 IPR016152 Phosphotransferase/anion transporter YP_RS19690 IPR018274 PEP-utilising enzyme, active site YP_RS19690 IPR023151 PEP-utilising enzyme, conserved site YP_RS19695 IPR003352 Phosphotransferase system, EIIC YP_RS19695 IPR006327 Phosphotransferase system, fructose IIC component YP_RS19700 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YP_RS19700 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YP_RS19705 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YP_RS19705 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YP_RS19710 IPR009057 Homeodomain-like YP_RS19710 IPR018060 DNA binding HTH domain, AraC-type YP_RS19710 IPR018062 HTH domain AraC-type, conserved site YP_RS19710 IPR020449 Transcription regulator HTH, AraC- type YP_RS19715 IPR023802 Colicin/pyocin immunity protein domain YP_RS19720 IPR010295 Protein of unknown function DUF898 YP_RS19725 IPR001915 Peptidase M48 YP_RS19735 IPR014544 Uncharacterised conserved protein UCP028408 YP_RS19735 IPR024534 Domain of unknown function DUF2220 YP_RS19735 IPR024537 Domain of unknown function DUF3322 YP_RS19740 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19760 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS19765 IPR002941 DNA methylase N-4/N-6 YP_RS19765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS19770 IPR002514 Transposase IS3/IS911family YP_RS19770 IPR009057 Homeodomain-like YP_RS19780 IPR019292 5-methylcytosine restriction system component YP_RS19785 IPR003593 AAA+ ATPase domain YP_RS19785 IPR011704 ATPase, dynein-related, AAA domain YP_RS19785 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19790 IPR001584 Integrase, catalytic core YP_RS19790 IPR006120 Resolvase, HTH domain YP_RS19790 IPR009057 Homeodomain-like YP_RS19790 IPR012337 Ribonuclease H-like domain YP_RS19795 IPR001270 ClpA/B family YP_RS19795 IPR002611 IstB-like ATP-binding protein YP_RS19795 IPR003593 AAA+ ATPase domain YP_RS19795 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19795 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YP_RS19800 IPR004045 Glutathione S-transferase, N-terminal YP_RS19800 IPR010987 Glutathione S-transferase, C-terminal-like YP_RS19800 IPR012336 Thioredoxin-like fold YP_RS19800 IPR016639 Glutathione S-transferase (GST) YP_RS19805 IPR000847 Transcription regulator HTH, LysR YP_RS19805 IPR005119 LysR, substrate-binding YP_RS19805 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS19810 IPR003829 Pirin, N-terminal domain YP_RS19810 IPR011051 RmlC-like cupin domain YP_RS19810 IPR012093 Pirin YP_RS19810 IPR014710 RmlC-like jelly roll fold YP_RS19815 IPR000878 Tetrapyrrole methylase YP_RS19815 IPR008189 rRNA small subunit methyltransferase I YP_RS19815 IPR014776 Tetrapyrrole methylase, subdomain 2 YP_RS19815 IPR014777 Tetrapyrrole methylase, subdomain 1 YP_RS19815 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YP_RS19820 IPR007443 Penicillin-binding protein activator LpoA YP_RS19820 IPR028082 Periplasmic binding protein-like I YP_RS19825 IPR003509 Uncharacterised protein family UPF0102 YP_RS19825 IPR011335 Restriction endonuclease type II-like YP_RS19825 IPR011856 tRNA endonuclease-like domain YP_RS19830 IPR001347 Sugar isomerase (SIS) YP_RS19830 IPR023070 DnaA initiator-associating protein YP_RS19835 IPR007055 BON domain YP_RS19835 IPR014004 Transport-associated and nodulation domain, bacteria YP_RS19840 IPR001264 Glycosyl transferase, family 51 YP_RS19840 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase YP_RS19840 IPR023346 Lysozyme-like domain YP_RS19845 IPR026041 Enhancing lycopene biosynthesis protein 2 YP_RS19845 IPR029062 Class I glutamine amidotransferase-like YP_RS19855 IPR000014 PAS domain YP_RS19855 IPR001789 Signal transduction response regulator, receiver domain YP_RS19855 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS19855 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YP_RS19855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YP_RS19855 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YP_RS19855 IPR011006 CheY-like superfamily YP_RS19855 IPR013767 PAS fold YP_RS19855 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YP_RS19855 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain YP_RS19865 IPR005911 Conserved hypothetical protein CHP01212 YP_RS19865 IPR006638 Elongator protein 3/MiaB/NifB YP_RS19865 IPR007197 Radical SAM YP_RS19865 IPR023404 Radical SAM, alpha/beta horseshoe YP_RS19865 IPR032432 YP_RS19865 YP_RS19870 IPR002489 Glutamate synthase, alpha subunit, C-terminal YP_RS19870 IPR002932 Glutamate synthase domain YP_RS19870 IPR006982 Glutamate synthase, central-N YP_RS19870 IPR013785 Aldolase-type TIM barrel YP_RS19870 IPR017932 Glutamine amidotransferase type 2 domain YP_RS19870 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS19875 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YP_RS19875 IPR009051 Alpha-helical ferredoxin YP_RS19875 IPR016040 NAD(P)-binding domain YP_RS19875 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS19875 IPR028261 Dihydroprymidine dehydrogenase domain II YP_RS19885 IPR007481 Stringent starvation protein B YP_RS19890 IPR004045 Glutathione S-transferase, N-terminal YP_RS19890 IPR004046 Glutathione S-transferase, C-terminal YP_RS19890 IPR010987 Glutathione S-transferase, C-terminal-like YP_RS19890 IPR012336 Thioredoxin-like fold YP_RS19900 IPR000754 Ribosomal protein S9 YP_RS19900 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS19900 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS19900 IPR020574 Ribosomal protein S9, conserved site YP_RS19900 IPR023035 Ribosomal protein S9, bacterial/plastid YP_RS19905 IPR005822 Ribosomal protein L13 YP_RS19905 IPR005823 Ribosomal protein L13, bacterial-type YP_RS19905 IPR023563 Ribosomal protein L13, conserved site YP_RS19905 IPR023564 Ribosomal protein L13 domain YP_RS19910 IPR005654 ATPase, AFG1-like YP_RS19910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19910 IPR030870 YP_RS19910 YP_RS19915 IPR009386 Protein of unknown function DUF1043 YP_RS19920 IPR001478 PDZ domain YP_RS19920 IPR001940 Peptidase S1C YP_RS19920 IPR009003 Trypsin-like cysteine/serine peptidase domain YP_RS19920 IPR011782 Peptidase S1C, Do YP_RS19925 IPR002686 Transposase IS200-like YP_RS19930 IPR001478 PDZ domain YP_RS19930 IPR001940 Peptidase S1C YP_RS19930 IPR009003 Trypsin-like cysteine/serine peptidase domain YP_RS19930 IPR011783 Peptidase S1C, DegS YP_RS19935 IPR001986 Enolpyruvate transferase domain YP_RS19935 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_RS19935 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YP_RS19940 IPR002634 BolA protein YP_RS19945 IPR002645 STAS domain YP_RS19950 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YP_RS19950 IPR023094 Toluene tolerance protein, alpha-helical YP_RS19950 IPR032710 YP_RS19950 YP_RS19955 IPR003399 Mammalian cell entry-related YP_RS19955 IPR030970 YP_RS19955 YP_RS19960 IPR003453 Permease domain YP_RS19960 IPR030802 YP_RS19960 YP_RS19965 IPR003439 ABC transporter-like YP_RS19965 IPR003593 AAA+ ATPase domain YP_RS19965 IPR017871 ABC transporter, conserved site YP_RS19965 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19970 IPR004481 Sodium/potassium/calcium exchanger YP_RS19970 IPR004837 Sodium/calcium exchanger membrane region YP_RS19975 IPR000644 CBS domain YP_RS19975 IPR001347 Sugar isomerase (SIS) YP_RS19975 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YP_RS19980 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_RS19980 IPR023214 HAD-like domain YP_RS19985 IPR010664 Lipopolysaccharide assembly, LptC-related YP_RS19985 IPR026265 Lipopolysaccharide export system protein LptC YP_RS19990 IPR005653 Organic solvent tolerance-like, N-terminal YP_RS19990 IPR014340 Lipopolysaccharide assembly, LptA YP_RS19995 IPR003439 ABC transporter-like YP_RS19995 IPR003593 AAA+ ATPase domain YP_RS19995 IPR017871 ABC transporter, conserved site YP_RS19995 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS19995 IPR030921 YP_RS19995 YP_RS19995 IPR032823 YP_RS19995 YP_RS20000 IPR000394 RNA polymerase sigma factor 54 YP_RS20000 IPR007046 RNA polymerase sigma factor 54, core-binding YP_RS20000 IPR007634 RNA polymerase sigma factor 54, DNA-binding YP_RS20010 IPR002178 PTS EIIA type-2 domain YP_RS20010 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YP_RS20010 IPR016152 Phosphotransferase/anion transporter YP_RS20015 IPR005337 ATPase, P-loop-containing YP_RS20015 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20020 IPR000032 Phosphocarrier HPr protein-like YP_RS20020 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YP_RS20025 IPR002082 Aspartate carbamoyltransferase YP_RS20025 IPR006130 Aspartate/ornithine carbamoyltransferase YP_RS20025 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YP_RS20025 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YP_RS20030 IPR002801 Aspartate transcarbamylase regulatory subunit YP_RS20030 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YP_RS20030 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YP_RS20035 IPR006056 Enamine/imine deaminase YjgF-like YP_RS20035 IPR006175 YjgF/Yer057p/UK114 family YP_RS20035 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YP_RS20035 IPR019897 YjgF-like protein, conserved site YP_RS20040 IPR031948 YP_RS20040 YP_RS20045 IPR000843 Transcription regulator HTH, LacI YP_RS20045 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS20045 IPR012771 Trehalose operon repressor YP_RS20045 IPR028082 Periplasmic binding protein-like I YP_RS20050 IPR001996 Phosphotransferase system, IIB component, type 1 YP_RS20050 IPR003352 Phosphotransferase system, EIIC YP_RS20050 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YP_RS20050 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YP_RS20055 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YP_RS20055 IPR012769 Trehalose-6-phosphate hydrolase YP_RS20055 IPR013780 Glycosyl hydrolase, family 13, all-beta YP_RS20055 IPR013781 Glycoside hydrolase, catalytic domain YP_RS20055 IPR015902 Glycoside hydrolase, family 13 YP_RS20055 IPR017853 Glycoside hydrolase, superfamily YP_RS20055 IPR022567 Domain of unknown function DUF3459 YP_RS20060 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YP_RS20060 IPR028625 Regulator of nucleoside diphosphate kinase YP_RS20060 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YP_RS20065 IPR009155 Cytochrome b562 YP_RS20065 IPR010980 Cytochrome c/b562 YP_RS20075 IPR002510 TldD/PmbA YP_RS20080 IPR006839 Ribosome-associated, YjgA YP_RS20080 IPR023153 PSPTO4464-like domain YP_RS20085 IPR000468 Barstar (barnase inhibitor) YP_RS20090 IPR000026 Guanine-specific ribonuclease N1/T1 YP_RS20090 IPR001887 Barnase YP_RS20090 IPR016191 Ribonuclease/ribotoxin YP_RS20095 IPR015590 Aldehyde dehydrogenase domain YP_RS20095 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS20095 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS20100 IPR015590 Aldehyde dehydrogenase domain YP_RS20100 IPR016160 Aldehyde dehydrogenase, cysteine active site YP_RS20100 IPR016161 Aldehyde/histidinol dehydrogenase YP_RS20100 IPR016162 Aldehyde dehydrogenase, N-terminal YP_RS20100 IPR016163 Aldehyde dehydrogenase, C-terminal YP_RS20100 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YP_RS20105 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YP_RS20105 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YP_RS20110 IPR006143 RND efflux pump, membrane fusion protein YP_RS20110 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YP_RS20115 IPR012451 Protein of unknown function DUF1656 YP_RS20120 IPR000847 Transcription regulator HTH, LysR YP_RS20120 IPR005119 LysR, substrate-binding YP_RS20120 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS20125 IPR000847 Transcription regulator HTH, LysR YP_RS20125 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS20130 IPR018003 Insecticidal toxin complex/plasmid virulence protein YP_RS20140 IPR003284 Salmonella virulence plasmid 65kDa B protein YP_RS20140 IPR022044 Insecticide toxin TcdB middle/C-terminal YP_RS20140 IPR022045 Insecticide toxin TcdB middle/N-terminal YP_RS20145 IPR032126 YP_RS20145 YP_RS20150 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YP_RS20155 IPR022538 Protein of unknown function DUF2570 YP_RS20165 IPR000340 Dual specificity phosphatase, catalytic domain YP_RS20165 IPR006530 YD repeat YP_RS20165 IPR016130 Protein-tyrosine phosphatase, active site YP_RS20165 IPR022385 Rhs repeat-associated core YP_RS20165 IPR029021 Protein-tyrosine phosphatase-like YP_RS20170 IPR006530 YD repeat YP_RS20170 IPR016130 Protein-tyrosine phosphatase, active site YP_RS20170 IPR022385 Rhs repeat-associated core YP_RS20170 IPR029021 Protein-tyrosine phosphatase-like YP_RS20175 IPR002510 TldD/PmbA YP_RS20175 IPR025502 TldD YP_RS20180 IPR001110 Uncharacterised protein family UPF0012, conserved site YP_RS20180 IPR003010 Carbon-nitrogen hydrolase YP_RS20185 IPR011836 Conserved hypothetical protein CHP02099 YP_RS20185 IPR025263 Domain of unknown function DUF3971 YP_RS20185 IPR032712 YP_RS20185 YP_RS20190 IPR003029 Ribosomal protein S1, RNA-binding domain YP_RS20190 IPR004659 Ribonuclease E/G YP_RS20190 IPR012340 Nucleic acid-binding, OB-fold YP_RS20190 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YP_RS20190 IPR022967 RNA-binding domain, S1 YP_RS20195 IPR003697 Maf-like protein YP_RS20195 IPR029001 Inosine triphosphate pyrophosphatase-like YP_RS20200 IPR007227 Cell shape-determining protein MreD YP_RS20200 IPR026034 Cell shape-determining protein MreD, proteobacterial type YP_RS20205 IPR007221 Rod shape-determining protein MreC YP_RS20210 IPR004753 Cell shape determining protein MreB/Mrl YP_RS20215 IPR000160 GGDEF domain YP_RS20215 IPR001633 EAL domain YP_RS20215 IPR029787 Nucleotide cyclase YP_RS20215 IPR033423 YP_RS20215 YP_RS20220 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YP_RS20220 IPR011032 GroES (chaperonin 10)-like YP_RS20220 IPR013149 Alcohol dehydrogenase, C-terminal YP_RS20220 IPR013154 Alcohol dehydrogenase GroES-like YP_RS20220 IPR014188 Acrylyl-CoA reductase AcuI YP_RS20220 IPR016040 NAD(P)-binding domain YP_RS20220 IPR020843 Polyketide synthase, enoylreductase YP_RS20225 IPR000572 Oxidoreductase, molybdopterin-binding domain YP_RS20225 IPR022867 Sulphoxide reductase catalytic subunit YedY YP_RS20230 IPR013130 Ferric reductase transmembrane component-like domain YP_RS20230 IPR022837 Sulphoxide reductase heme-binding subunit YedZ YP_RS20235 IPR001874 Dehydroquinase, class II YP_RS20235 IPR018509 Dehydroquinase, class II, conserved site YP_RS20240 IPR000089 Biotin/lipoyl attachment YP_RS20240 IPR001249 Acetyl-CoA biotin carboxyl carrier YP_RS20240 IPR001882 Biotin-binding site YP_RS20240 IPR011053 Single hybrid motif YP_RS20245 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YP_RS20245 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YP_RS20245 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal YP_RS20245 IPR005482 Biotin carboxylase, C-terminal YP_RS20245 IPR011054 Rudiment single hybrid motif YP_RS20245 IPR013815 ATP-grasp fold, subdomain 1 YP_RS20245 IPR013816 ATP-grasp fold, subdomain 2 YP_RS20245 IPR016185 Pre-ATP-grasp domain YP_RS20250 IPR010398 Protein of unknown function DUF997 YP_RS20255 IPR001734 Sodium/solute symporter YP_RS20255 IPR011849 Sodium/pantothenate symporter YP_RS20255 IPR018212 Sodium/solute symporter, conserved site YP_RS20260 IPR004498 Ribosomal protein L11 methyltransferase YP_RS20260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS20265 IPR001269 tRNA-dihydrouridine synthase YP_RS20265 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YP_RS20265 IPR013785 Aldolase-type TIM barrel YP_RS20265 IPR018517 tRNA-dihydrouridine synthase, conserved site YP_RS20265 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YP_RS20265 IPR032887 YP_RS20265 YP_RS20270 IPR002197 DNA binding HTH domain, Fis-type YP_RS20270 IPR005412 DNA-binding protein Fis YP_RS20270 IPR009057 Homeodomain-like YP_RS20275 IPR018958 SMI1/KNR4 like domain YP_RS20280 IPR000524 Transcription regulator HTH, GntR YP_RS20280 IPR008920 Transcription regulator FadR/GntR, C-terminal YP_RS20280 IPR011711 GntR, C-terminal YP_RS20280 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS20285 IPR005829 Sugar transporter, conserved site YP_RS20285 IPR011701 Major facilitator superfamily YP_RS20285 IPR020846 Major facilitator superfamily domain YP_RS20290 IPR003779 Carboxymuconolactone decarboxylase-like YP_RS20290 IPR029032 AhpD-like YP_RS20295 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YP_RS20295 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YP_RS20295 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS20295 IPR013328 Dehydrogenase, multihelical YP_RS20295 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type YP_RS20295 IPR016040 NAD(P)-binding domain YP_RS20295 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YP_RS20300 IPR001279 Beta-lactamase-like YP_RS20305 IPR008816 Glycine zipper 2TM domain YP_RS20315 IPR002059 Cold-shock protein, DNA-binding YP_RS20315 IPR011129 Cold shock protein YP_RS20315 IPR012156 Cold shock, CspA YP_RS20315 IPR012340 Nucleic acid-binding, OB-fold YP_RS20315 IPR019844 Cold-shock conserved site YP_RS20320 IPR002059 Cold-shock protein, DNA-binding YP_RS20320 IPR011129 Cold shock protein YP_RS20320 IPR012156 Cold shock, CspA YP_RS20320 IPR012340 Nucleic acid-binding, OB-fold YP_RS20320 IPR019844 Cold-shock conserved site YP_RS20325 IPR002686 Transposase IS200-like YP_RS20335 IPR001623 DnaJ domain YP_RS20340 IPR027372 Phytase-like domain YP_RS20345 IPR004045 Glutathione S-transferase, N-terminal YP_RS20345 IPR004046 Glutathione S-transferase, C-terminal YP_RS20345 IPR010987 Glutathione S-transferase, C-terminal-like YP_RS20345 IPR012336 Thioredoxin-like fold YP_RS20350 IPR001347 Sugar isomerase (SIS) YP_RS20355 IPR000577 YP_RS20355 YP_RS20355 IPR006003 Carbohydrate kinase, FGGY-related YP_RS20355 IPR018484 Carbohydrate kinase, FGGY, N-terminal YP_RS20355 IPR018485 Carbohydrate kinase, FGGY, C-terminal YP_RS20360 IPR001851 ABC transporter, permease YP_RS20365 IPR001851 ABC transporter, permease YP_RS20370 IPR003439 ABC transporter-like YP_RS20370 IPR003593 AAA+ ATPase domain YP_RS20370 IPR017871 ABC transporter, conserved site YP_RS20370 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20375 IPR025997 Periplasmic binding protein domain YP_RS20375 IPR028082 Periplasmic binding protein-like I YP_RS20380 IPR004960 Bacterial lipid A biosynthesis acyltransferase YP_RS20380 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_RS20380 IPR030857 YP_RS20380 YP_RS20390 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YP_RS20390 IPR006153 Cation/H+ exchanger YP_RS20390 IPR018422 Cation/H+ exchanger, CPA1 family YP_RS20395 IPR006043 Xanthine/uracil/vitamin C permease YP_RS20400 IPR007337 RelB antitoxin/Antitoxin DinJ YP_RS20400 IPR026262 Antitoxin DinJ YP_RS20405 IPR003439 ABC transporter-like YP_RS20405 IPR003593 AAA+ ATPase domain YP_RS20405 IPR017871 ABC transporter, conserved site YP_RS20405 IPR017875 ABC transporter, aliphatic sulphonate import, ATP-binding protein YP_RS20405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20410 IPR000515 MetI-like domain YP_RS20415 IPR011251 Luciferase-like domain YP_RS20415 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YP_RS20425 IPR005025 NADPH-dependent FMN reductase-like YP_RS20425 IPR020048 NADPH-dependent FMN reductase, SsuE YP_RS20425 IPR029039 Flavoprotein-like YP_RS20430 IPR002915 DeoC/FbaB/ lacD aldolase YP_RS20430 IPR011343 Deoxyribose-phosphate aldolase YP_RS20430 IPR013785 Aldolase-type TIM barrel YP_RS20435 IPR002139 Ribokinase YP_RS20435 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YP_RS20435 IPR011611 Carbohydrate kinase PfkB YP_RS20435 IPR029056 Ribokinase-like YP_RS20440 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YP_RS20440 IPR023750 RbsD-like domain YP_RS20445 IPR003313 AraC-type arabinose-binding/dimerisation domain YP_RS20445 IPR009057 Homeodomain-like YP_RS20445 IPR018060 DNA binding HTH domain, AraC-type YP_RS20450 IPR000683 Oxidoreductase, N-terminal YP_RS20450 IPR016040 NAD(P)-binding domain YP_RS20455 IPR013022 Xylose isomerase-like, TIM barrel domain YP_RS20460 IPR001207 Transposase, mutator type YP_RS20470 IPR001826 RHS protein YP_RS20470 IPR006530 YD repeat YP_RS20470 IPR008727 PAAR motif YP_RS20470 IPR022385 Rhs repeat-associated core YP_RS20470 IPR031325 YP_RS20470 YP_RS20475 IPR014894 Protein DcrB YP_RS20475 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YP_RS20480 IPR006531 Gp5 N-terminal YP_RS20480 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YP_RS20480 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YP_RS20490 IPR001387 Cro/C1-type helix-turn-helix domain YP_RS20490 IPR010982 Lambda repressor-like, DNA-binding domain YP_RS20495 IPR014944 Toxin SymE-like YP_RS20500 IPR014944 Toxin SymE-like YP_RS20505 IPR018958 SMI1/KNR4 like domain YP_RS20510 IPR001826 RHS protein YP_RS20510 IPR022385 Rhs repeat-associated core YP_RS20510 IPR032869 YP_RS20510 YP_RS20515 IPR006530 YD repeat YP_RS20515 IPR008727 PAAR motif YP_RS20515 IPR031325 YP_RS20515 YP_RS20520 IPR014894 Protein DcrB YP_RS20520 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YP_RS20525 IPR006531 Gp5 N-terminal YP_RS20525 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YP_RS20525 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YP_RS20530 IPR021069 ImpA, C-terminal YP_RS20535 IPR010657 ImpA, N-terminal YP_RS20540 IPR009612 ImcF-related YP_RS20540 IPR010623 Domain of unknown function DUF1215 YP_RS20540 IPR017731 Type VI secretion system, IcmF YP_RS20540 IPR025743 ImcF-related, N-terminal domain YP_RS20540 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20545 IPR010657 ImpA, N-terminal YP_RS20545 IPR017739 Type VI secretion system-associated, VCA0119 YP_RS20550 IPR017738 Type VI secretion system-associated, VCA0118 YP_RS20555 IPR002197 DNA binding HTH domain, Fis-type YP_RS20555 IPR009057 Homeodomain-like YP_RS20560 IPR001270 ClpA/B family YP_RS20560 IPR003593 AAA+ ATPase domain YP_RS20560 IPR003959 ATPase, AAA-type, core YP_RS20560 IPR004176 Clp, N-terminal YP_RS20560 IPR017729 Type VI secretion system, ATPase ClpV1 YP_RS20560 IPR018368 ClpA/B, conserved site 1 YP_RS20560 IPR019489 Clp ATPase, C-terminal YP_RS20560 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20560 IPR028299 ClpA/B, conserved site 2 YP_RS20565 IPR017732 Type IV / VI secretion system, DotU YP_RS20570 IPR010263 Protein of unknown function DUF876 YP_RS20575 IPR017734 Type VI secretion system, lipoprotein SciN YP_RS20580 IPR008984 SMAD/FHA domain YP_RS20580 IPR017735 Type VI secretion system, FHA domain-containing protein YP_RS20585 IPR010732 Protein of unknown function DUF1305 YP_RS20590 IPR010272 Type VI secretion system, VCA0110 YP_RS20595 IPR009057 Homeodomain-like YP_RS20595 IPR010921 Trp repressor/replication initiator YP_RS20595 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS20600 IPR001584 Integrase, catalytic core YP_RS20600 IPR012337 Ribonuclease H-like domain YP_RS20600 IPR025948 HTH-like domain YP_RS20605 IPR011701 Major facilitator superfamily YP_RS20605 IPR020846 Major facilitator superfamily domain YP_RS20620 IPR025320 Protein of unknown function DUF4225 YP_RS20630 IPR002513 Tn3 transposase DDE domain YP_RS20635 IPR004535 Translation elongation factor, selenocysteine-specific YP_RS20635 IPR009000 Translation protein, beta-barrel domain YP_RS20635 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YP_RS20635 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS20635 IPR015190 Translation elongation factor SelB, winged helix, type 2 YP_RS20635 IPR015191 Translation elongation factor SelB, winged helix, type 3 YP_RS20635 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20640 IPR000795 Elongation factor, GTP-binding domain YP_RS20640 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20640 IPR031157 YP_RS20640 YP_RS20645 IPR004534 L-seryl-tRNA selenium transferase YP_RS20645 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS20645 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS20645 IPR018319 L-seryl-tRNA selenium transferase-like YP_RS20645 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YP_RS20650 IPR006452 Formate dehydrogenase accessory protein YP_RS20650 IPR024064 FdhE-like YP_RS20655 IPR006471 Formate dehydrogenase, gamma subunit YP_RS20655 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YP_RS20655 IPR016174 Di-haem cytochrome, transmembrane YP_RS20660 IPR006470 Formate dehydrogenase, beta subunit YP_RS20660 IPR014603 Formate dehydrogenase, iron-sulphur subunit YP_RS20660 IPR015246 Formate dehydrogenase, transmembrane YP_RS20660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YP_RS20660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YP_RS20665 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic YP_RS20665 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YP_RS20665 IPR006656 Molybdopterin oxidoreductase YP_RS20665 IPR006657 Molydopterin dinucleotide-binding domain YP_RS20665 IPR009010 Aspartate decarboxylase-like domain YP_RS20670 IPR006656 Molybdopterin oxidoreductase YP_RS20670 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YP_RS20670 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YP_RS20675 IPR003786 Protein FdhD YP_RS20675 IPR016193 Cytidine deaminase-like YP_RS20680 IPR001189 Manganese/iron superoxide dismutase YP_RS20680 IPR019831 Manganese/iron superoxide dismutase, N-terminal YP_RS20680 IPR019832 Manganese/iron superoxide dismutase, C-terminal YP_RS20680 IPR019833 Manganese/iron superoxide dismutase, binding site YP_RS20685 IPR003660 HAMP linker domain YP_RS20685 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YP_RS20685 IPR004090 Chemotaxis methyl-accepting receptor YP_RS20685 IPR032255 YP_RS20685 YP_RS20695 IPR019545 DM13 domain YP_RS20700 IPR021230 Protein of unknown function DUF2810 YP_RS20705 IPR007761 Mannitol repressor YP_RS20710 IPR000669 Mannitol dehydrogenase YP_RS20710 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YP_RS20710 IPR013118 Mannitol dehydrogenase, C-terminal YP_RS20710 IPR013131 Mannitol dehydrogenase, N-terminal YP_RS20710 IPR013328 Dehydrogenase, multihelical YP_RS20710 IPR016040 NAD(P)-binding domain YP_RS20710 IPR023027 Mannitol dehydrogenase, conserved site YP_RS20710 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YP_RS20715 IPR002178 PTS EIIA type-2 domain YP_RS20715 IPR003352 Phosphotransferase system, EIIC YP_RS20715 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YP_RS20715 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC YP_RS20715 IPR016152 Phosphotransferase/anion transporter YP_RS20715 IPR029503 Phosphotransferase system EIIB component, mannitol-specific YP_RS20720 IPR021413 Protein of unknown function DUF3053 YP_RS20725 IPR008909 DALR anticodon binding YP_RS20725 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YP_RS20725 IPR015944 Glycine-tRNA ligase, beta subunit YP_RS20730 IPR002310 Glycine-tRNA ligase, alpha subunit YP_RS20735 IPR004597 DNA-3-methyladenine glycosylase I YP_RS20735 IPR005019 Methyladenine glycosylase YP_RS20735 IPR011257 DNA glycosylase YP_RS20740 IPR000182 GNAT domain YP_RS20740 IPR016181 Acyl-CoA N-acyltransferase YP_RS20745 IPR006664 Outer membrane protein, bacterial YP_RS20745 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YP_RS20750 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS20755 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_RS20755 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YP_RS20755 IPR016040 NAD(P)-binding domain YP_RS20755 IPR023756 Glyoxylate/hydroxypyruvate reductase B YP_RS20755 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YP_RS20755 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YP_RS20760 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YP_RS20760 IPR013781 Glycoside hydrolase, catalytic domain YP_RS20760 IPR014635 Alpha-amylase, MalS type YP_RS20760 IPR015902 Glycoside hydrolase, family 13 YP_RS20760 IPR017853 Glycoside hydrolase, superfamily YP_RS20770 IPR004839 Aminotransferase, class I/classII YP_RS20770 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YP_RS20770 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YP_RS20770 IPR015424 Pyridoxal phosphate-dependent transferase YP_RS20775 IPR006037 Regulator of K+ conductance, C-terminal YP_RS20775 IPR006512 YidE/YbjL duplication YP_RS20775 IPR023018 Transport protein YidE, putative YP_RS20780 IPR002068 Alpha crystallin/Hsp20 domain YP_RS20780 IPR008978 HSP20-like chaperone YP_RS20780 IPR022848 Small heat shock protein IbpB YP_RS20780 IPR031107 YP_RS20780 YP_RS20785 IPR002068 Alpha crystallin/Hsp20 domain YP_RS20785 IPR008978 HSP20-like chaperone YP_RS20785 IPR023728 Small heat shock protein IbpA YP_RS20785 IPR031107 YP_RS20785 YP_RS20790 IPR010780 Protein of unknown function DUF1375 YP_RS20795 IPR011042 Six-bladed beta-propeller, TolB-like YP_RS20795 IPR011659 WD40-like Beta Propeller YP_RS20805 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YP_RS20805 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YP_RS20810 IPR003462 Ornithine cyclodeaminase/mu-crystallin YP_RS20810 IPR016040 NAD(P)-binding domain YP_RS20810 IPR023401 Ornithine cyclodeaminase, N-terminal YP_RS20815 IPR009057 Homeodomain-like YP_RS20815 IPR010921 Trp repressor/replication initiator YP_RS20815 IPR011991 Winged helix-turn-helix DNA-binding domain YP_RS20820 IPR001584 Integrase, catalytic core YP_RS20820 IPR012337 Ribonuclease H-like domain YP_RS20820 IPR025948 HTH-like domain YP_RS20825 IPR000150 Cof protein YP_RS20825 IPR006379 HAD-superfamily hydrolase, subfamily IIB YP_RS20825 IPR023214 HAD-like domain YP_RS20830 IPR000565 DNA topoisomerase, type IIA, subunit B YP_RS20830 IPR001241 DNA topoisomerase, type IIA YP_RS20830 IPR002288 DNA gyrase B subunit, C-terminal YP_RS20830 IPR003594 Histidine kinase-like ATPase, C-terminal domain YP_RS20830 IPR006171 Toprim domain YP_RS20830 IPR011557 DNA gyrase, subunit B YP_RS20830 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YP_RS20830 IPR013759 DNA topoisomerase, type IIA, central domain YP_RS20830 IPR013760 DNA topoisomerase, type IIA-like domain YP_RS20830 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS20830 IPR018522 DNA topoisomerase, type IIA, conserved site YP_RS20830 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS20835 IPR001238 DNA-binding, RecF YP_RS20835 IPR003395 RecF/RecN/SMC, N-terminal YP_RS20835 IPR018078 DNA-binding, RecF, conserved site YP_RS20835 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20845 IPR001001 DNA polymerase III, beta chain YP_RS20845 IPR022634 DNA polymerase III, beta chain, N-terminal YP_RS20845 IPR022635 DNA polymerase III, beta chain, C-terminal YP_RS20845 IPR022637 DNA polymerase III, beta chain, central YP_RS20850 IPR001957 Chromosomal replication control, initiator DnaA YP_RS20850 IPR003593 AAA+ ATPase domain YP_RS20850 IPR010921 Trp repressor/replication initiator YP_RS20850 IPR013159 Chromosomal replication initiator, DnaA C-terminal YP_RS20850 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YP_RS20850 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YP_RS20850 IPR020591 Chromosomal replication control, initiator DnaA-like YP_RS20850 IPR024633 DnaA N-terminal domain YP_RS20850 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20855 IPR000271 Ribosomal protein L34 YP_RS20855 IPR020939 Ribosomal protein L34, conserved site YP_RS20860 IPR000100 Ribonuclease P YP_RS20860 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YP_RS20860 IPR020539 Ribonuclease P, conserved site YP_RS20860 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS20865 IPR001708 Membrane insertase OXA1/ALB3/YidC YP_RS20865 IPR019998 Membrane insertase YidC YP_RS20865 IPR028053 Membrane insertase YidC, N-terminal YP_RS20865 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YP_RS20870 IPR004520 tRNA modification GTPase MnmE YP_RS20870 IPR005225 Small GTP-binding protein domain YP_RS20870 IPR006073 GTP binding domain YP_RS20870 IPR018948 GTP-binding protein TrmE, N-terminal YP_RS20870 IPR025867 tRNA modification GTPase MnmE C-terminal domain YP_RS20870 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YP_RS20870 IPR027368 tRNA modification GTPase MnmE domain 2 YP_RS20870 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20875 IPR010758 Trans-2-enoyl-CoA reductase YP_RS20875 IPR024906 Enoyl reductase FAD binding domain YP_RS20875 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YP_RS20890 IPR006043 Xanthine/uracil/vitamin C permease YP_RS20890 IPR026033 Purine permease PbuG-like YP_RS20890 IPR029940 YP_RS20890 YP_RS20895 IPR006439 HAD hydrolase, subfamily IA YP_RS20895 IPR023214 HAD-like domain YP_RS20900 IPR000515 MetI-like domain YP_RS20900 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS20905 IPR000515 MetI-like domain YP_RS20905 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YP_RS20910 IPR001638 Extracellular solute-binding protein, family 3 YP_RS20910 IPR018313 Extracellular solute-binding protein, family 3, conserved site YP_RS20915 IPR007607 Protein of unknown function DUF583 YP_RS20920 IPR026022 PhoU domain YP_RS20920 IPR028366 Phosphate transport system protein PhoU YP_RS20925 IPR003439 ABC transporter-like YP_RS20925 IPR003593 AAA+ ATPase domain YP_RS20925 IPR005670 Phosphate transport system permease protein 1 YP_RS20925 IPR017871 ABC transporter, conserved site YP_RS20925 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20930 IPR000515 MetI-like domain YP_RS20930 IPR005672 Phosphate transport system permease protein PstA YP_RS20935 IPR000515 MetI-like domain YP_RS20935 IPR011864 Phosphate ABC transporter, permease protein PstC YP_RS20940 IPR005673 ABC transporter, phosphate-binding protein PstS YP_RS20940 IPR024370 PBP domain YP_RS20945 IPR001347 Sugar isomerase (SIS) YP_RS20945 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YP_RS20945 IPR029055 Nucleophile aminohydrolases, N-terminal YP_RS20950 IPR001451 Bacterial transferase hexapeptide repeat YP_RS20950 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_RS20950 IPR011004 Trimeric LpxA-like YP_RS20950 IPR018357 Hexapeptide transferase, conserved site YP_RS20950 IPR025877 MobA-like NTP transferase domain YP_RS20950 IPR029044 Nucleotide-diphospho-sugar transferases YP_RS20955 IPR001469 ATPase, F1 complex, delta/epsilon subunit YP_RS20955 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal YP_RS20955 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain YP_RS20960 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YP_RS20960 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_RS20960 IPR003593 AAA+ ATPase domain YP_RS20960 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YP_RS20960 IPR005722 ATPase, F1 complex, beta subunit YP_RS20960 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YP_RS20960 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal YP_RS20960 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20965 IPR000131 ATPase, F1 complex, gamma subunit YP_RS20965 IPR023632 ATPase, F1 complex, gamma subunit conserved site YP_RS20965 IPR023633 ATPase, F1 complex, gamma subunit domain YP_RS20970 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YP_RS20970 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_RS20970 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YP_RS20970 IPR005294 ATPase, F1 complex, alpha subunit YP_RS20970 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YP_RS20970 IPR023366 ATP synthase subunit alpha-like domain YP_RS20970 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS20975 IPR000711 ATPase, OSCP/delta subunit YP_RS20975 IPR020781 ATPase, OSCP/delta subunit, conserved site YP_RS20975 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YP_RS20980 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast YP_RS20980 IPR005864 ATPase, F0 complex, subunit B, bacterial YP_RS20980 IPR028987 F-type ATP synthase subunit B-like, membrane domain YP_RS20985 IPR000454 ATPase, F0 complex, subunit C YP_RS20985 IPR002379 V-ATPase proteolipid subunit C-like domain YP_RS20985 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast YP_RS20985 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site YP_RS20990 IPR000568 ATPase, F0 complex, subunit A YP_RS20990 IPR023011 ATPase, F0 complex, subunit A, active site YP_RS20995 IPR005598 ATP synthase protein I YP_RS21000 IPR003682 rRNA small subunit methyltransferase G YP_RS21000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YP_RS21005 IPR002218 Glucose-inhibited division protein A-related YP_RS21005 IPR004416 Glucose-inhibited division protein A YP_RS21005 IPR020595 Glucose-inhibited division protein A-related, conserved site YP_RS21005 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_RS21005 IPR026904 GidA associated domain 3 YP_RS21050 IPR003855 K+ potassium transporter YP_RS21205 IPR002078 RNA polymerase sigma factor 54 interaction domain YP_RS21205 IPR011006 CheY-like superfamily YP_RS21205 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YP_RS21205 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS21245 IPR006439 HAD hydrolase, subfamily IA YP_RS21245 IPR023198 Phosphoglycolate phosphatase, domain 2 YP_RS21245 IPR023214 HAD-like domain YP_RS21370 IPR001247 Exoribonuclease, phosphorolytic domain 1 YP_RS21370 IPR002381 Ribonuclease phosphorolytic, bacterial-type YP_RS21370 IPR018336 Ribonuclease PH, conserved site YP_RS21370 IPR020568 Ribosomal protein S5 domain 2-type fold YP_RS21370 IPR027408 PNPase/RNase PH domain YP_RS21450 IPR016040 NAD(P)-binding domain YP_RS21775 IPR001789 Signal transduction response regulator, receiver domain YP_RS21775 IPR011006 CheY-like superfamily YP_RS21775 IPR027417 P-loop containing nucleoside triphosphate hydrolase YP_RS21885 IPR012340 Nucleic acid-binding, OB-fold YP_RS21885 IPR033454 YP_RS21885 YP_RS21890 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YP_RS21890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YP_RS21890 IPR029028 Alpha/beta knot methyltransferases YP_RS21935 IPR005115 Uncharacterised domain UPF0126 YP_RS21960 IPR001647 DNA-binding HTH domain, TetR-type YP_RS21960 IPR009057 Homeodomain-like YP_RS21960 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YP_RS21960 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YP_RS22025 IPR011055 Duplicated hybrid motif YP_RS22025 IPR016047 Peptidase M23 YP_RS22165 IPR001433 Oxidoreductase FAD/NAD(P)-binding YP_RS22235 IPR003855 K+ potassium transporter YP_RS22270 IPR019600 Hemin uptake protein HemP