##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM788v1 #!genome-build-accession NCBI_Assembly:GCF_000007885.1 ##sequence-region NC_005810.1 1 4595065 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=229193 NC_005810.1 RefSeq region 1 4595065 . + . ID=id0;Dbxref=taxon:229193;Is_circular=true;Name=ANONYMOUS;biovar=Microtus;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=91001;sub-species=microtus NC_005810.1 RefSeq gene 21 461 . - . ID=gene0;Name=YP_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00005;old_locus_tag=YP0001%2CYP_0001 NC_005810.1 Protein Homology CDS 21 461 . - 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_002212258.1;Name=WP_002212258.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NC_005810.1 RefSeq gene 554 1015 . - . ID=gene1;Name=YP_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00010;old_locus_tag=YP0002%2CYP_0002 NC_005810.1 Protein Homology CDS 554 1015 . - 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11 NC_005810.1 RefSeq gene 1185 2177 . + . ID=gene2;Name=YP_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00015;old_locus_tag=YP0003%2CYP_0003 NC_005810.1 Protein Homology CDS 1185 2177 . + 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NC_005810.1 RefSeq gene 2276 3742 . - . ID=gene3;Name=YP_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00020;old_locus_tag=YP0004%2CYP_0004 NC_005810.1 Protein Homology CDS 2276 3742 . - 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_002212255.1;Name=WP_002212255.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_002212255.1;transl_table=11 NC_005810.1 RefSeq gene 3746 5314 . - . ID=gene4;Name=YP_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00025;old_locus_tag=YP0005%2CYP_0005 NC_005810.1 Protein Homology CDS 3746 5314 . - 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_011171736.1;Name=WP_011171736.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=regulatory ATPase RavA;protein_id=WP_011171736.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3767 3826 . + . ID=id1;Note=degenerate repeat region containing 4 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 5588 7456 . + . ID=gene5;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=YP_RS00030;old_locus_tag=YP0006%2CYP_0006 NC_005810.1 Protein Homology CDS 5588 7456 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_002212253.1;Name=WP_002212253.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_002212253.1;transl_table=11 NC_005810.1 RefSeq repeat_region 7488 7523 . + . ID=id2;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 7661 8080 . + . ID=gene6;Name=YP_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00035;old_locus_tag=YP0007%2CYP_0007 NC_005810.1 Protein Homology CDS 7661 8080 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NC_005810.1 RefSeq gene 8131 9057 . + . ID=gene7;Name=YP_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00040;old_locus_tag=YP0008%2CYP_0008 NC_005810.1 Protein Homology CDS 8131 9057 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_002212251.1;Name=WP_002212251.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NC_005810.1 RefSeq gene 9110 9280 . + . ID=gene8;Name=YP_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00045;old_locus_tag=YP0009%2CYP_0009 NC_005810.1 Protein Homology CDS 9110 9280 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11 NC_005810.1 RefSeq gene 9277 10701 . - . ID=gene9;Name=YP_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00050;old_locus_tag=YP0010%2CYP_0010 NC_005810.1 Protein Homology CDS 9277 10701 . - 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_002212250.1;Name=WP_002212250.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002212250.1;transl_table=11 NC_005810.1 RefSeq gene 10781 11470 . - . ID=gene10;Name=YP_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00055;old_locus_tag=YP0011%2CYP_0011 NC_005810.1 Protein Homology CDS 10781 11470 . - 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NC_005810.1 RefSeq repeat_region 11581 17420 . + . ID=id3;gbkey=repeat_region NC_005810.1 RefSeq gene 12027 13575 . + . ID=gene11;Name=YP_RS00065;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS00065;old_locus_tag=16S_rRNA_1%2CYP_r1 NC_005810.1 RefSeq rRNA 12027 13575 . + . ID=rna0;Parent=gene11;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq exon 12027 13575 . + . ID=id4;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq gene 13709 13784 . + . ID=gene12;Name=YP_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS00070;old_locus_tag=tRNA-Glu_1%2CYP_t1 NC_005810.1 tRNAscan-SE tRNA 13709 13784 . + . ID=rna1;Parent=gene12;anticodon=(pos:13743..13745);gbkey=tRNA;product=tRNA-Glu NC_005810.1 tRNAscan-SE exon 13709 13784 . + . ID=id5;Parent=rna1;anticodon=(pos:13743..13745);gbkey=tRNA;product=tRNA-Glu NC_005810.1 RefSeq gene 14028 16961 . + . ID=gene13;Name=YP_RS00075;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS00075;old_locus_tag=23S_rRNA_1%2CYP_r2 NC_005810.1 RefSeq rRNA 14028 16961 . + . ID=rna2;Parent=gene13;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq exon 14028 16961 . + . ID=id6;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq gene 17053 17168 . + . ID=gene14;Name=YP_RS00080;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS00080 NC_005810.1 cmsearch rRNA 17053 17168 . + . ID=rna3;Parent=gene14;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 17053 17168 . + . ID=id7;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq gene 17319 17549 . + . ID=gene15;Name=YP_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22260 NC_005810.1 Protein Homology CDS 17319 17549 . + 0 ID=cds11;Parent=gene15;Dbxref=Genbank:WP_025473721.1;Name=WP_025473721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025473721.1;transl_table=11 NC_005810.1 RefSeq repeat_region 17523 17560 . + . ID=id8;Note=exact repeat region containing 2 copies of a 19 bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 17617 18935 . + . ID=id9;gbkey=repeat_region NC_005810.1 RefSeq region 17619 18933 . + . ID=id10;gbkey=mobile_element NC_005810.1 RefSeq gene 17690 18898 . + . ID=gene16;Name=YP_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00085;old_locus_tag=YP0012%2CYP_0012 NC_005810.1 Protein Homology CDS 17690 18898 . + 0 ID=cds12;Parent=gene16;Dbxref=Genbank:WP_011171737.1;Name=WP_011171737.1;gbkey=CDS;product=transposase;protein_id=WP_011171737.1;transl_table=11 NC_005810.1 RefSeq gene 18956 19486 . - . ID=gene17;Name=YP_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00090;old_locus_tag=YP0013%2CYP_0013 NC_005810.1 Protein Homology CDS 18956 19486 . - 0 ID=cds13;Parent=gene17;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11 NC_005810.1 RefSeq gene 19486 20073 . - . ID=gene18;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YP_RS00095;old_locus_tag=YP0014%2CYP_0014 NC_005810.1 Protein Homology CDS 19486 20073 . - 0 ID=cds14;Parent=gene18;Dbxref=Genbank:WP_002230340.1;Name=WP_002230340.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdopterin-guanine dinucleotide biosynthesis protein MobA;protein_id=WP_002230340.1;transl_table=11 NC_005810.1 RefSeq gene 20227 20496 . + . ID=gene19;Name=YP_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00100;old_locus_tag=YP0015%2CYP_0015 NC_005810.1 Protein Homology CDS 20227 20496 . + 0 ID=cds15;Parent=gene19;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11 NC_005810.1 RefSeq gene 20587 21573 . + . ID=gene20;Name=YP_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00105;old_locus_tag=YP0016%2CYP_0016 NC_005810.1 Protein Homology CDS 20587 21573 . + 0 ID=cds16;Parent=gene20;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NC_005810.1 RefSeq gene 21601 22224 . + . ID=gene21;Name=YP_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00110;old_locus_tag=YP0017%2CYP_0017 NC_005810.1 Protein Homology CDS 21601 22224 . + 0 ID=cds17;Parent=gene21;Dbxref=Genbank:WP_002213168.1;Name=WP_002213168.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NC_005810.1 RefSeq gene 22716 25514 . + . ID=gene22;Name=YP_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00115;old_locus_tag=YP0018%2CYP_0018 NC_005810.1 Protein Homology CDS 22716 25514 . + 0 ID=cds18;Parent=gene22;Dbxref=Genbank:WP_002230341.1;Name=WP_002230341.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_002230341.1;transl_table=11 NC_005810.1 RefSeq repeat_region 25773 26492 . + . ID=id11;gbkey=repeat_region NC_005810.1 RefSeq region 25778 26489 . + . ID=id12;gbkey=mobile_element NC_005810.1 RefSeq gene 25778 25933 . + . ID=gene23;Name=YP_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00120 NC_005810.1 Protein Homology CDS 25778 25933 . + 0 ID=cds19;Parent=gene23;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_005810.1 RefSeq gene 25872 26381 . + . ID=gene24;Name=YP_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00125;old_locus_tag=YP0019%2CYP_0019 NC_005810.1 Protein Homology CDS 25872 26381 . + 0 ID=cds20;Parent=gene24;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11 NC_005810.1 RefSeq gene 26633 27283 . - . ID=gene25;Name=YP_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00130;old_locus_tag=YP0020%2CYP_0020 NC_005810.1 Protein Homology CDS 26633 27283 . - 0 ID=cds21;Parent=gene25;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11 NC_005810.1 RefSeq gene 28028 28594 . + . ID=gene26;Name=YP_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00135;old_locus_tag=YP0021%2CYP_0021 NC_005810.1 Protein Homology CDS 28028 28594 . + 0 ID=cds22;Parent=gene26;Dbxref=Genbank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NC_005810.1 RefSeq gene 28777 30150 . + . ID=gene27;Name=YP_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00140;old_locus_tag=YP0022%2CYP_0022 NC_005810.1 Protein Homology CDS 28777 30150 . + 0 ID=cds23;Parent=gene27;Dbxref=Genbank:WP_002213155.1;Name=WP_002213155.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NC_005810.1 RefSeq gene 30204 31616 . - . ID=gene28;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YP_RS00145;old_locus_tag=YP0023%2CYP_0023 NC_005810.1 Protein Homology CDS 30204 31616 . - 0 ID=cds24;Parent=gene28;Dbxref=Genbank:WP_002213152.1;Name=WP_002213152.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_002213152.1;transl_table=11 NC_005810.1 RefSeq gene 31624 32673 . - . ID=gene29;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YP_RS00150;old_locus_tag=YP0024%2CYP_0024 NC_005810.1 Protein Homology CDS 31624 32673 . - 0 ID=cds25;Parent=gene29;Dbxref=Genbank:WP_002213151.1;Name=WP_002213151.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_002213151.1;transl_table=11 NC_005810.1 RefSeq gene 32926 34335 . - . ID=gene30;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YP_RS00155;old_locus_tag=YP0025%2CYP_0025 NC_005810.1 Protein Homology CDS 32926 34335 . - 0 ID=cds26;Parent=gene30;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11 NC_005810.1 RefSeq gene 34521 34652 . - . ID=gene31;Name=YP_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00160;old_locus_tag=YP0026%2CYP_0026 NC_005810.1 Protein Homology CDS 34521 34652 . - 0 ID=cds27;Parent=gene31;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11 NC_005810.1 RefSeq gene 34897 36720 . + . ID=gene32;Name=YP_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00165;old_locus_tag=YP0027%2CYP_0027 NC_005810.1 Protein Homology CDS 34897 36720 . + 0 ID=cds28;Parent=gene32;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11 NC_005810.1 RefSeq gene 37042 37632 . + . ID=gene33;Name=YP_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00170;old_locus_tag=YP0028%2CYP_0028 NC_005810.1 Protein Homology CDS 37042 37632 . + 0 ID=cds29;Parent=gene33;Dbxref=Genbank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;product=phosphatase;protein_id=WP_002209011.1;transl_table=11 NC_005810.1 RefSeq gene 37729 38613 . + . ID=gene34;Name=YP_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00175;old_locus_tag=YP0029%2CYP_0029 NC_005810.1 Protein Homology CDS 37729 38613 . + 0 ID=cds30;Parent=gene34;Dbxref=Genbank:WP_002209010.1;Name=WP_002209010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209010.1;transl_table=11 NC_005810.1 RefSeq gene 38620 39057 . + . ID=gene35;Name=YP_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00180;old_locus_tag=YP0030%2CYP_0030 NC_005810.1 Protein Homology CDS 38620 39057 . + 0 ID=cds31;Parent=gene35;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NC_005810.1 RefSeq repeat_region 39063 41020 . + . ID=id13;gbkey=repeat_region NC_005810.1 RefSeq region 39066 41018 . - . ID=id14;gbkey=mobile_element NC_005810.1 RefSeq gene 39131 39910 . - . ID=gene36;Name=YP_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00185;old_locus_tag=YP0031%2CYP_0031 NC_005810.1 Protein Homology CDS 39131 39910 . - 0 ID=cds32;Parent=gene36;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 39910 40932 . - . ID=gene37;Name=YP_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00190;old_locus_tag=YP0032%2CYP_0032 NC_005810.1 Protein Homology CDS 39910 40932 . - 0 ID=cds33;Parent=gene37;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 41203 42126 . + . ID=gene38;Name=YP_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00195;old_locus_tag=YP0033%2CYP_0033 NC_005810.1 Protein Homology CDS 41203 42126 . + 0 ID=cds34;Parent=gene38;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11 NC_005810.1 RefSeq gene 42261 43970 . - . ID=gene39;Name=YP_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00200;old_locus_tag=YP0034 NC_005810.1 Protein Homology CDS 42261 43970 . - 0 ID=cds35;Parent=gene39;Dbxref=Genbank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209007.1;transl_table=11 NC_005810.1 RefSeq gene 44118 45503 . - . ID=gene40;Name=YP_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00205;old_locus_tag=YP0035%2CYP_0035 NC_005810.1 Protein Homology CDS 44118 45503 . - 0 ID=cds36;Parent=gene40;Dbxref=Genbank:WP_002209006.1;Name=WP_002209006.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease;protein_id=WP_002209006.1;transl_table=11 NC_005810.1 RefSeq gene 45741 46955 . + . ID=gene41;Name=YP_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00210;old_locus_tag=YP0036%2CYP_0036 NC_005810.1 Protein Homology CDS 45741 46955 . + 0 ID=cds37;Parent=gene41;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11 NC_005810.1 RefSeq repeat_region 47053 47232 . + . ID=id15;gbkey=repeat_region NC_005810.1 RefSeq gene 47321 49402 . - . ID=gene42;Name=YP_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00215;old_locus_tag=YP0037%2CYP_0037 NC_005810.1 Protein Homology CDS 47321 49402 . - 0 ID=cds38;Parent=gene42;Dbxref=Genbank:WP_002209004.1;Name=WP_002209004.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NC_005810.1 RefSeq gene 49403 50062 . - . ID=gene43;Name=YP_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00220;old_locus_tag=YP0038%2CYP_0038 NC_005810.1 Protein Homology CDS 49403 50062 . - 0 ID=cds39;Parent=gene43;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11 NC_005810.1 RefSeq gene 50101 52209 . - . ID=gene44;Name=YP_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00225;old_locus_tag=YP0039%2CYP_0039 NC_005810.1 Protein Homology CDS 50101 52209 . - 0 ID=cds40;Parent=gene44;Dbxref=Genbank:WP_002209002.1;Name=WP_002209002.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NC_005810.1 RefSeq gene 52229 52504 . - . ID=gene45;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YP_RS00230;old_locus_tag=YP0040%2CYP_0040 NC_005810.1 Protein Homology CDS 52229 52504 . - 0 ID=cds41;Parent=gene45;Dbxref=Genbank:WP_002209001.1;Name=WP_002209001.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002209001.1;transl_table=11 NC_005810.1 RefSeq gene 52559 53182 . - . ID=gene46;Name=YP_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00235;old_locus_tag=YP0041%2CYP_0041 NC_005810.1 Protein Homology CDS 52559 53182 . - 0 ID=cds42;Parent=gene46;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NC_005810.1 RefSeq gene 53583 55286 . + . ID=gene47;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=YP_RS00240;old_locus_tag=YP0042%2CYP_0042 NC_005810.1 Protein Homology CDS 53583 55286 . + 0 ID=cds43;Parent=gene47;Dbxref=Genbank:WP_002215674.1;Name=WP_002215674.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_002215674.1;transl_table=11 NC_005810.1 RefSeq gene 55299 55922 . - . ID=gene48;Name=YP_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00245;old_locus_tag=YP0043%2CYP_0043 NC_005810.1 Protein Homology CDS 55299 55922 . - 0 ID=cds44;Parent=gene48;Dbxref=Genbank:WP_002215676.1;Name=WP_002215676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215676.1;transl_table=11 NC_005810.1 RefSeq gene 56325 57188 . - . ID=gene49;Name=YP_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00250;old_locus_tag=YP0044%2CYP_0044 NC_005810.1 Protein Homology CDS 56325 57188 . - 0 ID=cds45;Parent=gene49;Dbxref=Genbank:WP_002208998.1;Name=WP_002208998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208998.1;transl_table=11 NC_005810.1 RefSeq gene 57315 58031 . + . ID=gene50;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YP_RS00255;old_locus_tag=YP0045%2CYP_0045 NC_005810.1 Protein Homology CDS 57315 58031 . + 0 ID=cds46;Parent=gene50;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NC_005810.1 RefSeq gene 58198 58845 . + . ID=gene51;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YP_RS00260;old_locus_tag=YP0046%2CYP_0046 NC_005810.1 Protein Homology CDS 58198 58845 . + 0 ID=cds47;Parent=gene51;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NC_005810.1 RefSeq gene 58980 59576 . - . ID=gene52;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=YP_RS00265;old_locus_tag=YP0047%2CYP_0047 NC_005810.1 Protein Homology CDS 58980 59576 . - 0 ID=cds48;Parent=gene52;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NC_005810.1 RefSeq gene 59698 60156 . - . ID=gene53;Name=YP_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00270;old_locus_tag=YP0048%2CYP_0048 NC_005810.1 Protein Homology CDS 59698 60156 . - 0 ID=cds49;Parent=gene53;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11 NC_005810.1 RefSeq gene 60134 61351 . - . ID=gene54;Name=YP_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00275;old_locus_tag=YP0049%2CYP_0049 NC_005810.1 Protein Homology CDS 60134 61351 . - 0 ID=cds50;Parent=gene54;Dbxref=Genbank:WP_002208993.1;Name=WP_002208993.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002208993.1;transl_table=11 NC_005810.1 RefSeq gene 61545 62213 . + . ID=gene55;Name=YP_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00280;old_locus_tag=YP0050%2CYP_0050 NC_005810.1 Protein Homology CDS 61545 62213 . + 0 ID=cds51;Parent=gene55;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11 NC_005810.1 RefSeq gene 62476 62712 . + . ID=gene56;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YP_RS00285;old_locus_tag=YP0051%2CYP_0051 NC_005810.1 Protein Homology CDS 62476 62712 . + 0 ID=cds52;Parent=gene56;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NC_005810.1 RefSeq gene 62724 62891 . + . ID=gene57;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YP_RS00290;old_locus_tag=YP0052%2CYP_0052 NC_005810.1 Protein Homology CDS 62724 62891 . + 0 ID=cds53;Parent=gene57;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NC_005810.1 RefSeq gene 62974 63783 . + . ID=gene58;Name=YP_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00295;old_locus_tag=YP0053%2CYP_0053 NC_005810.1 Protein Homology CDS 62974 63783 . + 0 ID=cds54;Parent=gene58;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11 NC_005810.1 RefSeq gene 63789 64268 . - . ID=gene59;Name=YP_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00300;old_locus_tag=YP0054%2CYP_0054 NC_005810.1 Protein Homology CDS 63789 64268 . - 0 ID=cds55;Parent=gene59;Dbxref=Genbank:WP_002208988.1;Name=WP_002208988.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_002208988.1;transl_table=11 NC_005810.1 RefSeq gene 64265 65047 . - . ID=gene60;Name=YP_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00305;old_locus_tag=YP0055%2CYP_0055 NC_005810.1 Protein Homology CDS 64265 65047 . - 0 ID=cds56;Parent=gene60;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11 NC_005810.1 RefSeq gene 65048 66325 . - . ID=gene61;Name=YP_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00310;old_locus_tag=YP0056%2CYP_0056 NC_005810.1 Protein Homology CDS 65048 66325 . - 0 ID=cds57;Parent=gene61;Dbxref=Genbank:WP_002230352.1;Name=WP_002230352.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002230352.1;transl_table=11 NC_005810.1 RefSeq gene 66745 67710 . - . ID=gene62;Name=YP_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00315;old_locus_tag=YP0057%2CYP_0057 NC_005810.1 Protein Homology CDS 66745 67710 . - 0 ID=cds58;Parent=gene62;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11 NC_005810.1 RefSeq gene 67710 68774 . - . ID=gene63;Name=YP_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00320;old_locus_tag=YP0058%2CYP_0058 NC_005810.1 Protein Homology CDS 67710 68774 . - 0 ID=cds59;Parent=gene63;Dbxref=Genbank:WP_002208984.1;Name=WP_002208984.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208984.1;transl_table=11 NC_005810.1 RefSeq gene 68805 69737 . - . ID=gene64;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YP_RS00325;old_locus_tag=YP0059%2CYP_0059 NC_005810.1 Protein Homology CDS 68805 69737 . - 0 ID=cds60;Parent=gene64;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11 NC_005810.1 RefSeq gene 69983 71194 . + . ID=gene65;Name=YP_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00330;old_locus_tag=YP0060%2CYP_0060 NC_005810.1 Protein Homology CDS 69983 71194 . + 0 ID=cds61;Parent=gene65;Dbxref=Genbank:WP_011171743.1;Name=WP_011171743.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_011171743.1;transl_table=11 NC_005810.1 RefSeq gene 71204 72229 . + . ID=gene66;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YP_RS00335;old_locus_tag=YP0061%2CYP_0061 NC_005810.1 Protein Homology CDS 71204 72229 . + 0 ID=cds62;Parent=gene66;Dbxref=Genbank:WP_002208981.1;Name=WP_002208981.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_002208981.1;transl_table=11 NC_005810.1 RefSeq gene 72367 73301 . - . ID=gene67;Name=YP_RS00340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS00340;old_locus_tag=YP0062;pseudo=true NC_005810.1 Protein Homology CDS 72367 73301 . - 0 ID=cds63;Parent=gene67;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar deacetylase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 73325 74695 . - . ID=gene68;Name=YP_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00345;old_locus_tag=YP0063%2CYP_0063 NC_005810.1 Protein Homology CDS 73325 74695 . - 0 ID=cds64;Parent=gene68;Dbxref=Genbank:WP_002208980.1;Name=WP_002208980.1;gbkey=CDS;product=peptidase M37;protein_id=WP_002208980.1;transl_table=11 NC_005810.1 RefSeq gene 74705 76252 . - . ID=gene69;Name=YP_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00350;old_locus_tag=YP0064%2CYP_0064 NC_005810.1 Protein Homology CDS 74705 76252 . - 0 ID=cds65;Parent=gene69;Dbxref=Genbank:WP_002208979.1;Name=WP_002208979.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002208979.1;transl_table=11 NC_005810.1 RefSeq repeat_region 76356 76395 . + . ID=id16;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 76649 77083 . + . ID=gene70;Name=YP_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00355;old_locus_tag=YP0065%2CYP_0065 NC_005810.1 Protein Homology CDS 76649 77083 . + 0 ID=cds66;Parent=gene70;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11 NC_005810.1 RefSeq gene 77202 77450 . + . ID=gene71;Name=YP_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00360;old_locus_tag=YP0066%2CYP_0066 NC_005810.1 Protein Homology CDS 77202 77450 . + 0 ID=cds67;Parent=gene71;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11 NC_005810.1 RefSeq gene 77538 78014 . + . ID=gene72;Name=YP_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00365;old_locus_tag=YP0067%2CYP_0067 NC_005810.1 Protein Homology CDS 77538 78014 . + 0 ID=cds68;Parent=gene72;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11 NC_005810.1 RefSeq gene 78014 79033 . + . ID=gene73;Name=YP_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00370;old_locus_tag=YP0068%2CYP_0068 NC_005810.1 Protein Homology CDS 78014 79033 . + 0 ID=cds69;Parent=gene73;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11 NC_005810.1 RefSeq gene 79093 79233 . + . ID=gene74;Name=YP_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00375;old_locus_tag=YP0069%2CYP_0069 NC_005810.1 Protein Homology CDS 79093 79233 . + 0 ID=cds70;Parent=gene74;Dbxref=Genbank:WP_002228146.1;Name=WP_002228146.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228146.1;transl_table=11 NC_005810.1 RefSeq gene 79299 80120 . + . ID=gene75;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YP_RS00380;old_locus_tag=YP0070%2CYP_0070 NC_005810.1 Protein Homology CDS 79299 80120 . + 0 ID=cds71;Parent=gene75;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NC_005810.1 RefSeq gene 80243 80731 . - . ID=gene76;Name=YP_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00385;old_locus_tag=YP0071%2CYP_0071 NC_005810.1 Protein Homology CDS 80243 80731 . - 0 ID=cds72;Parent=gene76;Dbxref=Genbank:WP_002208973.1;Name=WP_002208973.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_002208973.1;transl_table=11 NC_005810.1 RefSeq gene 80920 81984 . + . ID=gene77;Name=YP_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00390;old_locus_tag=YP0072%2CYP_0072 NC_005810.1 Protein Homology CDS 80920 81984 . + 0 ID=cds73;Parent=gene77;Dbxref=Genbank:WP_002208972.1;Name=WP_002208972.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_002208972.1;transl_table=11 NC_005810.1 RefSeq gene 82033 83409 . - . ID=gene78;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YP_RS00395;old_locus_tag=YP0073%2CYP_0073 NC_005810.1 Protein Homology CDS 82033 83409 . - 0 ID=cds74;Parent=gene78;Dbxref=Genbank:WP_002208971.1;Name=WP_002208971.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_002208971.1;transl_table=11 NC_005810.1 RefSeq gene 83406 84104 . - . ID=gene79;Name=YP_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00400;old_locus_tag=YP0074%2CYP_0074 NC_005810.1 Protein Homology CDS 83406 84104 . - 0 ID=cds75;Parent=gene79;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11 NC_005810.1 RefSeq gene 84278 84766 . + . ID=gene80;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YP_RS00405;old_locus_tag=YP0075%2CYP_0075 NC_005810.1 Protein Homology CDS 84278 84766 . + 0 ID=cds76;Parent=gene80;Dbxref=Genbank:WP_002208969.1;Name=WP_002208969.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_002208969.1;transl_table=11 NC_005810.1 RefSeq gene 85444 86403 . + . ID=gene81;Name=YP_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00410;old_locus_tag=YP0077%2CYP_0077 NC_005810.1 Protein Homology CDS 85444 86403 . + 0 ID=cds77;Parent=gene81;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11 NC_005810.1 RefSeq gene 86965 87867 . + . ID=gene82;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=YP_RS00415;old_locus_tag=YP0079%2CYP_0079 NC_005810.1 Protein Homology CDS 86965 87867 . + 0 ID=cds78;Parent=gene82;Dbxref=Genbank:WP_002208967.1;Name=WP_002208967.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=cation-efflux pump FieF;protein_id=WP_002208967.1;transl_table=11 NC_005810.1 RefSeq gene 88085 89068 . + . ID=gene83;Name=YP_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00420;old_locus_tag=YP0080%2CYP_0080 NC_005810.1 Protein Homology CDS 88085 89068 . + 0 ID=cds79;Parent=gene83;Dbxref=Genbank:WP_002208966.1;Name=WP_002208966.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_002208966.1;transl_table=11 NC_005810.1 RefSeq gene 89289 90278 . + . ID=gene84;Name=YP_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00425;old_locus_tag=YP0081%2CYP_0081 NC_005810.1 Protein Homology CDS 89289 90278 . + 0 ID=cds80;Parent=gene84;Dbxref=Genbank:WP_002208965.1;Name=WP_002208965.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_002208965.1;transl_table=11 NC_005810.1 RefSeq gene 90528 91187 . - . ID=gene85;Name=YP_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00430;old_locus_tag=YP0082%2CYP_0082 NC_005810.1 Protein Homology CDS 90528 91187 . - 0 ID=cds81;Parent=gene85;Dbxref=Genbank:WP_025473238.1;Name=WP_025473238.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_025473238.1;transl_table=11 NC_005810.1 RefSeq gene 91422 92849 . - . ID=gene86;Name=YP_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00435;old_locus_tag=YP0083%2CYP_0083 NC_005810.1 Protein Homology CDS 91422 92849 . - 0 ID=cds82;Parent=gene86;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11 NC_005810.1 RefSeq gene 92915 93148 . - . ID=gene87;Name=YP_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00440 NC_005810.1 Protein Homology CDS 92915 93148 . - 0 ID=cds83;Parent=gene87;Dbxref=Genbank:WP_032487461.1;Name=WP_032487461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032487461.1;transl_table=11 NC_005810.1 RefSeq repeat_region 93141 95097 . + . ID=id17;gbkey=repeat_region NC_005810.1 RefSeq region 93144 95096 . - . ID=id18;gbkey=mobile_element NC_005810.1 RefSeq gene 93209 93988 . - . ID=gene88;Name=YP_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00445;old_locus_tag=YP0085%2CYP_0085 NC_005810.1 Protein Homology CDS 93209 93988 . - 0 ID=cds84;Parent=gene88;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 93988 95010 . - . ID=gene89;Name=YP_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00450;old_locus_tag=YP0086%2CYP_0086 NC_005810.1 Protein Homology CDS 93988 95010 . - 0 ID=cds85;Parent=gene89;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 95072 95587 . - . ID=gene90;Name=YP_RS00455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS00455;partial=true;pseudo=true;start_range=.,95072 NC_005810.1 Protein Homology CDS 95072 95587 . - 0 ID=cds86;Parent=gene90;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,95072;transl_table=11 NC_005810.1 RefSeq gene 95584 96321 . - . ID=gene91;Name=YP_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00460;old_locus_tag=YP0087%2CYP_0087 NC_005810.1 Protein Homology CDS 95584 96321 . - 0 ID=cds87;Parent=gene91;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11 NC_005810.1 RefSeq gene 96458 97693 . + . ID=gene92;Name=YP_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00465;old_locus_tag=YP0088%2CYP_0088 NC_005810.1 Protein Homology CDS 96458 97693 . + 0 ID=cds88;Parent=gene92;Dbxref=Genbank:WP_002208960.1;Name=WP_002208960.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208960.1;transl_table=11 NC_005810.1 RefSeq gene 97925 98692 . - . ID=gene93;Name=YP_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00470;old_locus_tag=YP0089%2CYP_0089 NC_005810.1 Protein Homology CDS 97925 98692 . - 0 ID=cds89;Parent=gene93;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NC_005810.1 RefSeq gene 98821 99456 . - . ID=gene94;Name=YP_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00475;old_locus_tag=YP0090%2CYP_0090 NC_005810.1 Protein Homology CDS 98821 99456 . - 0 ID=cds90;Parent=gene94;Dbxref=Genbank:WP_002215864.1;Name=WP_002215864.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215864.1;transl_table=11 NC_005810.1 RefSeq gene 99604 100038 . + . ID=gene95;Name=YP_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00480;old_locus_tag=YP0091%2CYP_0091 NC_005810.1 Protein Homology CDS 99604 100038 . + 0 ID=cds91;Parent=gene95;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11 NC_005810.1 RefSeq repeat_region 100283 100320 . + . ID=id19;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 100379 101125 . - . ID=gene96;Name=YP_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00485;old_locus_tag=YP0092%2CYP_0092 NC_005810.1 Protein Homology CDS 100379 101125 . - 0 ID=cds92;Parent=gene96;Dbxref=Genbank:WP_011171744.1;Name=WP_011171744.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_011171744.1;transl_table=11 NC_005810.1 RefSeq gene 101280 102290 . - . ID=gene97;Name=YP_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00490;old_locus_tag=YP0093%2CYP_0093 NC_005810.1 Protein Homology CDS 101280 102290 . - 0 ID=cds93;Parent=gene97;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NC_005810.1 RefSeq gene 102527 104050 . - . ID=gene98;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YP_RS00495;old_locus_tag=YP0094%2CYP_0094 NC_005810.1 Protein Homology CDS 102527 104050 . - 0 ID=cds94;Parent=gene98;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11 NC_005810.1 RefSeq gene 104227 105075 . - . ID=gene99;Name=YP_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00500;old_locus_tag=YP0095%2CYP_0095 NC_005810.1 Protein Homology CDS 104227 105075 . - 0 ID=cds95;Parent=gene99;Dbxref=Genbank:WP_002208954.1;Name=WP_002208954.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_002208954.1;transl_table=11 NC_005810.1 RefSeq gene 105085 105324 . - . ID=gene100;Name=YP_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00505;old_locus_tag=YP0096%2CYP_0096 NC_005810.1 Protein Homology CDS 105085 105324 . - 0 ID=cds96;Parent=gene100;Dbxref=Genbank:WP_002215868.1;Name=WP_002215868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215868.1;transl_table=11 NC_005810.1 RefSeq gene 105260 105535 . + . ID=gene101;Name=YP_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00510 NC_005810.1 Protein Homology CDS 105260 105535 . + 0 ID=cds97;Parent=gene101;Dbxref=Genbank:WP_016603915.1;Name=WP_016603915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016603915.1;transl_table=11 NC_005810.1 RefSeq gene 105687 105926 . + . ID=gene102;Name=YP_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00515;old_locus_tag=YP0097%2CYP_0097 NC_005810.1 Protein Homology CDS 105687 105926 . + 0 ID=cds98;Parent=gene102;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11 NC_005810.1 RefSeq repeat_region 106020 106738 . + . ID=id20;gbkey=repeat_region NC_005810.1 RefSeq region 106026 106737 . - . ID=id21;gbkey=mobile_element NC_005810.1 RefSeq gene 106134 106592 . - . ID=gene103;Name=YP_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00520;old_locus_tag=YP0098%2CYP_0098 NC_005810.1 Protein Homology CDS 106134 106592 . - 0 ID=cds99;Parent=gene103;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq repeat_region 106915 106956 . + . ID=id22;gbkey=repeat_region NC_005810.1 RefSeq gene 106984 109098 . - . ID=gene104;Name=YP_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00525;old_locus_tag=YP0100%2CYP_0100 NC_005810.1 Protein Homology CDS 106984 109098 . - 0 ID=cds100;Parent=gene104;Dbxref=Genbank:WP_002230357.1;Name=WP_002230357.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002230357.1;transl_table=11 NC_005810.1 RefSeq gene 109091 110383 . - . ID=gene105;Name=YP_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00530;old_locus_tag=YP0101%2CYP_0101 NC_005810.1 Protein Homology CDS 109091 110383 . - 0 ID=cds101;Parent=gene105;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11 NC_005810.1 RefSeq gene 110596 110835 . + . ID=gene106;Name=YP_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00535;old_locus_tag=YP0102%2CYP_0102 NC_005810.1 Protein Homology CDS 110596 110835 . + 0 ID=cds102;Parent=gene106;Dbxref=Genbank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NC_005810.1 RefSeq gene 111010 111159 . + . ID=gene107;Name=YP_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00540;old_locus_tag=YP0103%2CYP_0103 NC_005810.1 Protein Homology CDS 111010 111159 . + 0 ID=cds103;Parent=gene107;Dbxref=Genbank:WP_002208947.1;Name=WP_002208947.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208947.1;transl_table=11 NC_005810.1 RefSeq gene 111465 112049 . + . ID=gene108;Name=YP_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00545;old_locus_tag=YP0104%2CYP_0104 NC_005810.1 Protein Homology CDS 111465 112049 . + 0 ID=cds104;Parent=gene108;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11 NC_005810.1 RefSeq gene 112166 112651 . - . ID=gene109;Name=YP_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00550;old_locus_tag=YP0105%2CYP_0105 NC_005810.1 Protein Homology CDS 112166 112651 . - 0 ID=cds105;Parent=gene109;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=ribonuclease E activity regulator RraA;protein_id=WP_002208945.1;transl_table=11 NC_005810.1 RefSeq gene 112793 113710 . - . ID=gene110;Name=YP_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00555;old_locus_tag=YP0106%2CYP_0106 NC_005810.1 Protein Homology CDS 112793 113710 . - 0 ID=cds106;Parent=gene110;Dbxref=Genbank:WP_002208944.1;Name=WP_002208944.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_002208944.1;transl_table=11 NC_005810.1 RefSeq gene 113946 115277 . - . ID=gene111;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YP_RS00560;old_locus_tag=YP0107%2CYP_0107 NC_005810.1 Protein Homology CDS 113946 115277 . - 0 ID=cds107;Parent=gene111;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NC_005810.1 RefSeq gene 115348 115872 . - . ID=gene112;Name=YP_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00565;old_locus_tag=YP0108%2CYP_0108 NC_005810.1 Protein Homology CDS 115348 115872 . - 0 ID=cds108;Parent=gene112;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NC_005810.1 RefSeq gene 115972 116817 . - . ID=gene113;Name=YP_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00570;old_locus_tag=YP0109%2CYP_0109 NC_005810.1 Protein Homology CDS 115972 116817 . - 0 ID=cds109;Parent=gene113;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NC_005810.1 RefSeq gene 116883 117911 . - . ID=gene114;Name=YP_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00575;old_locus_tag=YP0110%2CYP_0110 NC_005810.1 Protein Homology CDS 116883 117911 . - 0 ID=cds110;Parent=gene114;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11 NC_005810.1 RefSeq gene 118034 118177 . - . ID=gene115;Name=YP_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00580 NC_005810.1 Protein Homology CDS 118034 118177 . - 0 ID=cds111;Parent=gene115;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11 NC_005810.1 RefSeq gene 118264 120462 . - . ID=gene116;Name=YP_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00585;old_locus_tag=YP0111%2CYP_0111 NC_005810.1 Protein Homology CDS 118264 120462 . - 0 ID=cds112;Parent=gene116;Dbxref=Genbank:WP_002208938.1;Name=WP_002208938.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002208938.1;transl_table=11 NC_005810.1 RefSeq gene 120715 120930 . + . ID=gene117;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YP_RS00590;old_locus_tag=YP0112%2CYP_0112 NC_005810.1 Protein Homology CDS 120715 120930 . + 0 ID=cds113;Parent=gene117;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NC_005810.1 RefSeq repeat_region 121373 121444 . + . ID=id23;Note=degenerate repeat region containing 2 copies of a 36bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 121473 121928 . - . ID=gene118;Name=YP_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00595;old_locus_tag=YP0113%2CYP_0113 NC_005810.1 Protein Homology CDS 121473 121928 . - 0 ID=cds114;Parent=gene118;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11 NC_005810.1 RefSeq gene 121979 122140 . + . ID=gene119;Name=YP_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00600;old_locus_tag=YP0114%2CYP_0114 NC_005810.1 Protein Homology CDS 121979 122140 . + 0 ID=cds115;Parent=gene119;Dbxref=Genbank:WP_002216739.1;Name=WP_002216739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216739.1;transl_table=11 NC_005810.1 RefSeq gene 122277 122594 . - . ID=gene120;Name=YP_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00605;old_locus_tag=YP0116%2CYP_0116 NC_005810.1 Protein Homology CDS 122277 122594 . - 0 ID=cds116;Parent=gene120;Dbxref=Genbank:WP_002208935.1;Name=WP_002208935.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_002208935.1;transl_table=11 NC_005810.1 RefSeq gene 122972 124132 . + . ID=gene121;Name=YP_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00610;old_locus_tag=YP0117%2CYP_0117 NC_005810.1 Protein Homology CDS 122972 124132 . + 0 ID=cds117;Parent=gene121;Dbxref=Genbank:WP_002221173.1;Name=WP_002221173.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;product=cystathionine gamma-synthase;protein_id=WP_002221173.1;transl_table=11 NC_005810.1 RefSeq gene 124135 126570 . + . ID=gene122;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YP_RS00615;old_locus_tag=YP0118%2CYP_0118 NC_005810.1 Protein Homology CDS 124135 126570 . + 0 ID=cds118;Parent=gene122;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NC_005810.1 RefSeq gene 126803 127687 . + . ID=gene123;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YP_RS00620;old_locus_tag=YP0119%2CYP_0119 NC_005810.1 Protein Homology CDS 126803 127687 . + 0 ID=cds119;Parent=gene123;Dbxref=Genbank:WP_002208933.1;Name=WP_002208933.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NC_005810.1 RefSeq repeat_region 127720 129357 . + . ID=id24;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 127722 127753 . + . ID=id25;gbkey=repeat_region NC_005810.1 RefSeq region 127833 129360 . - . ID=id26;gbkey=mobile_element NC_005810.1 RefSeq gene 127865 128650 . - . ID=gene124;Name=YP_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00625;old_locus_tag=YP0120%2CYP_0120 NC_005810.1 Protein Homology CDS 127865 128650 . - 0 ID=cds120;Parent=gene124;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_005810.1 RefSeq gene 128704 129219 . - . ID=gene125;Name=YP_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00630;old_locus_tag=YP0121 NC_005810.1 Protein Homology CDS 128704 129219 . - 0 ID=cds121;Parent=gene125;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_005810.1 RefSeq gene 129412 130170 . - . ID=gene126;Name=YP_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00635;old_locus_tag=YP0122%2CYP_0122 NC_005810.1 Protein Homology CDS 129412 130170 . - 0 ID=cds122;Parent=gene126;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NC_005810.1 RefSeq gene 130205 131041 . - . ID=gene127;Name=YP_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00640;old_locus_tag=YP0123%2CYP_0123 NC_005810.1 Protein Homology CDS 130205 131041 . - 0 ID=cds123;Parent=gene127;Dbxref=Genbank:WP_002216348.1;Name=WP_002216348.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_002216348.1;transl_table=11 NC_005810.1 RefSeq gene 131059 131388 . - . ID=gene128;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YP_RS00645;old_locus_tag=YP0124%2CYP_0124 NC_005810.1 Protein Homology CDS 131059 131388 . - 0 ID=cds124;Parent=gene128;Dbxref=Genbank:WP_002218928.1;Name=WP_002218928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002218928.1;transl_table=11 NC_005810.1 RefSeq repeat_region 131444 131487 . + . ID=id27;Note=degenerate repeat region containing 2 copies of a 22bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 131763 134474 . - . ID=gene129;Name=YP_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00650;old_locus_tag=YP0125%2CYP_0125 NC_005810.1 Protein Homology CDS 131763 134474 . - 0 ID=cds125;Parent=gene129;Dbxref=Genbank:WP_002208926.1;Name=WP_002208926.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208926.1;transl_table=11 NC_005810.1 RefSeq gene 134792 135142 . + . ID=gene130;Name=YP_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00655 NC_005810.1 GeneMarkS+ CDS 134792 135142 . + 0 ID=cds126;Parent=gene130;Dbxref=Genbank:WP_002215922.1;Name=WP_002215922.1;gbkey=CDS;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_002215922.1;transl_table=11 NC_005810.1 RefSeq gene 135172 137196 . + . ID=gene131;Name=YP_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00660;old_locus_tag=YP0126 NC_005810.1 Protein Homology CDS 135172 137196 . + 0 ID=cds127;Parent=gene131;Dbxref=Genbank:WP_002430067.1;Name=WP_002430067.1;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=WP_002430067.1;transl_table=11 NC_005810.1 RefSeq gene 137209 139305 . + . ID=gene132;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YP_RS00665;old_locus_tag=YP0127%2CYP_0127 NC_005810.1 Protein Homology CDS 137209 139305 . + 0 ID=cds128;Parent=gene132;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NC_005810.1 RefSeq gene 139634 140209 . - . ID=gene133;Name=YP_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00670;old_locus_tag=YP0128%2CYP_0128 NC_005810.1 Protein Homology CDS 139634 140209 . - 0 ID=cds129;Parent=gene133;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11 NC_005810.1 RefSeq gene 140269 140970 . - . ID=gene134;Name=YP_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00675;old_locus_tag=YP0129%2CYP_0129 NC_005810.1 Protein Homology CDS 140269 140970 . - 0 ID=cds130;Parent=gene134;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11 NC_005810.1 RefSeq gene 141057 141833 . + . ID=gene135;Name=YP_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00680;old_locus_tag=YP0130%2CYP_0130 NC_005810.1 Protein Homology CDS 141057 141833 . + 0 ID=cds131;Parent=gene135;Dbxref=Genbank:WP_002208922.1;Name=WP_002208922.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_002208922.1;transl_table=11 NC_005810.1 RefSeq gene 142003 142272 . + . ID=gene136;Name=YP_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00685;old_locus_tag=YP0131%2CYP_0131 NC_005810.1 Protein Homology CDS 142003 142272 . + 0 ID=cds132;Parent=gene136;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11 NC_005810.1 RefSeq gene 142410 142667 . - . ID=gene137;Name=YP_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00690;old_locus_tag=YP0132%2CYP_0132 NC_005810.1 Protein Homology CDS 142410 142667 . - 0 ID=cds133;Parent=gene137;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11 NC_005810.1 RefSeq gene 142703 145018 . - . ID=gene138;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YP_RS00695;old_locus_tag=YP0133%2CYP_0133 NC_005810.1 Protein Homology CDS 142703 145018 . - 0 ID=cds134;Parent=gene138;Dbxref=Genbank:WP_002208919.1;Name=WP_002208919.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_002208919.1;transl_table=11 NC_005810.1 RefSeq gene 145110 145337 . - . ID=gene139;Name=YP_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00700;old_locus_tag=YP0134%2CYP_0134 NC_005810.1 Protein Homology CDS 145110 145337 . - 0 ID=cds135;Parent=gene139;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11 NC_005810.1 RefSeq gene 145332 145478 . + . ID=gene140;Name=YP_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00705 NC_005810.1 Protein Homology CDS 145332 145478 . + 0 ID=cds136;Parent=gene140;Dbxref=Genbank:WP_002215925.1;Name=WP_002215925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215925.1;transl_table=11 NC_005810.1 RefSeq gene 145861 148236 . - . ID=gene141;Name=YP_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00710;old_locus_tag=YP0135%2CYP_0135 NC_005810.1 Protein Homology CDS 145861 148236 . - 0 ID=cds137;Parent=gene141;Dbxref=Genbank:WP_002208916.1;Name=WP_002208916.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_002208916.1;transl_table=11 NC_005810.1 RefSeq repeat_region 148514 148543 . + . ID=id28;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 148770 149285 . + . ID=gene142;Name=YP_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00715;old_locus_tag=YP0136%2CYP_0136 NC_005810.1 Protein Homology CDS 148770 149285 . + 0 ID=cds138;Parent=gene142;Dbxref=Genbank:WP_002208915.1;Name=WP_002208915.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NC_005810.1 RefSeq repeat_region 149239 149274 . + . ID=id29;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq protein_binding_site 149308 149327 . + . ID=id30;Dbxref=CollecTF:EXPSITE_0002b330;Note=Transcription factor binding site for NP_991538. Originally reported in Yersinia pestis biovar Microtus str. 201~Evidence of regulation for: YP_0137;gbkey=protein_bind NC_005810.1 RefSeq gene 149421 150140 . + . ID=gene143;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YP_RS00720;old_locus_tag=YP0137%2CYP_0137 NC_005810.1 Protein Homology CDS 149421 150140 . + 0 ID=cds139;Parent=gene143;Dbxref=Genbank:WP_002208914.1;Name=WP_002208914.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_002208914.1;transl_table=11 NC_005810.1 RefSeq gene 150137 151489 . + . ID=gene144;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=YP_RS00725;old_locus_tag=YP0138%2CYP_0138 NC_005810.1 Protein Homology CDS 150137 151489 . + 0 ID=cds140;Parent=gene144;Dbxref=Genbank:WP_011171748.1;Name=WP_011171748.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_011171748.1;transl_table=11 NC_005810.1 RefSeq repeat_region 151503 151542 . + . ID=id31;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 151624 153243 . - . ID=gene145;Name=YP_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00730;old_locus_tag=YP0139%2CYP_0139 NC_005810.1 Protein Homology CDS 151624 153243 . - 0 ID=cds141;Parent=gene145;Dbxref=Genbank:WP_002208912.1;Name=WP_002208912.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_002208912.1;transl_table=11 NC_005810.1 RefSeq gene 153440 154321 . - . ID=gene146;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YP_RS00735;old_locus_tag=YP0140%2CYP_0140 NC_005810.1 Protein Homology CDS 153440 154321 . - 0 ID=cds142;Parent=gene146;Dbxref=Genbank:WP_002208911.1;Name=WP_002208911.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_002208911.1;transl_table=11 NC_005810.1 RefSeq gene 154484 154891 . - . ID=gene147;Name=YP_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00740;old_locus_tag=YP0141%2CYP_0141 NC_005810.1 Protein Homology CDS 154484 154891 . - 0 ID=cds143;Parent=gene147;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NC_005810.1 RefSeq gene 154920 155600 . - . ID=gene148;Name=YP_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00745;old_locus_tag=YP0142%2CYP_0142 NC_005810.1 Protein Homology CDS 154920 155600 . - 0 ID=cds144;Parent=gene148;Dbxref=Genbank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;product=nucleotidase;protein_id=WP_002208909.1;transl_table=11 NC_005810.1 RefSeq gene 155744 157891 . - . ID=gene149;Name=YP_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00750;old_locus_tag=YP0143%2CYP_0143 NC_005810.1 Protein Homology CDS 155744 157891 . - 0 ID=cds145;Parent=gene149;Dbxref=Genbank:WP_002208908.1;Name=WP_002208908.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_002208908.1;transl_table=11 NC_005810.1 RefSeq gene 158171 158365 . + . ID=gene150;Name=YP_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00755;old_locus_tag=YP0144%2CYP_0144 NC_005810.1 Protein Homology CDS 158171 158365 . + 0 ID=cds146;Parent=gene150;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11 NC_005810.1 RefSeq gene 158478 159023 . + . ID=gene151;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YP_RS00760;old_locus_tag=YP0145%2CYP_0145 NC_005810.1 Protein Homology CDS 158478 159023 . + 0 ID=cds147;Parent=gene151;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11 NC_005810.1 RefSeq gene 159159 161714 . - . ID=gene152;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YP_RS00765;old_locus_tag=YP0146%2CYP_0146 NC_005810.1 Protein Homology CDS 159159 161714 . - 0 ID=cds148;Parent=gene152;Dbxref=Genbank:WP_002208906.1;Name=WP_002208906.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_002208906.1;transl_table=11 NC_005810.1 RefSeq gene 161834 162730 . + . ID=gene153;Name=YP_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00770;old_locus_tag=YP0147%2CYP_0147 NC_005810.1 Protein Homology CDS 161834 162730 . + 0 ID=cds149;Parent=gene153;Dbxref=Genbank:WP_002208905.1;Name=WP_002208905.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_002208905.1;transl_table=11 NC_005810.1 RefSeq gene 162730 163335 . + . ID=gene154;Name=YP_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00775;old_locus_tag=YP0148%2CYP_0148 NC_005810.1 Protein Homology CDS 162730 163335 . + 0 ID=cds150;Parent=gene154;Dbxref=Genbank:WP_002208904.1;Name=WP_002208904.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_002208904.1;transl_table=11 NC_005810.1 RefSeq repeat_region 163263 163292 . + . ID=id32;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 163328 163909 . + . ID=gene155;Name=YP_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00780;old_locus_tag=YP0149%2CYP_0149 NC_005810.1 Protein Homology CDS 163328 163909 . + 0 ID=cds151;Parent=gene155;Dbxref=Genbank:WP_002217890.1;Name=WP_002217890.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217890.1;transl_table=11 NC_005810.1 RefSeq repeat_region 163898 163927 . + . ID=id33;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 163944 164303 . + . ID=gene156;Name=YP_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00785;old_locus_tag=YP0150%2CYP_0150 NC_005810.1 Protein Homology CDS 163944 164303 . + 0 ID=cds152;Parent=gene156;Dbxref=Genbank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223837.1;transl_table=11 NC_005810.1 RefSeq gene 164306 164695 . - . ID=gene157;Name=YP_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00790;old_locus_tag=YP0151%2CYP_0151 NC_005810.1 Protein Homology CDS 164306 164695 . - 0 ID=cds153;Parent=gene157;Dbxref=Genbank:WP_002208901.1;Name=WP_002208901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208901.1;transl_table=11 NC_005810.1 RefSeq gene 164730 165854 . + . ID=gene158;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=YP_RS00795;old_locus_tag=YP0152%2CYP_0152 NC_005810.1 Protein Homology CDS 164730 165854 . + 0 ID=cds154;Parent=gene158;Dbxref=Genbank:WP_002228144.1;Name=WP_002228144.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_002228144.1;transl_table=11 NC_005810.1 RefSeq gene 166203 166724 . + . ID=gene159;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YP_RS00800;old_locus_tag=YP0153%2CYP_0153 NC_005810.1 Protein Homology CDS 166203 166724 . + 0 ID=cds155;Parent=gene159;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11 NC_005810.1 RefSeq gene 166781 167869 . + . ID=gene160;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YP_RS00805;old_locus_tag=YP0154%2CYP_0154 NC_005810.1 Protein Homology CDS 166781 167869 . + 0 ID=cds156;Parent=gene160;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NC_005810.1 RefSeq gene 168123 169112 . + . ID=gene161;Name=YP_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00810;old_locus_tag=YP0155%2CYP_0155 NC_005810.1 Protein Homology CDS 168123 169112 . + 0 ID=cds157;Parent=gene161;Dbxref=Genbank:WP_002208897.1;Name=WP_002208897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208897.1;transl_table=11 NC_005810.1 RefSeq gene 169196 170011 . + . ID=gene162;Name=YP_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00815;old_locus_tag=YP0156%2CYP_0156 NC_005810.1 Protein Homology CDS 169196 170011 . + 0 ID=cds158;Parent=gene162;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11 NC_005810.1 RefSeq gene 170314 170991 . + . ID=gene163;Name=YP_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00820;old_locus_tag=YP0157%2CYP_0157 NC_005810.1 Protein Homology CDS 170314 170991 . + 0 ID=cds159;Parent=gene163;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NC_005810.1 RefSeq gene 170984 171682 . + . ID=gene164;Name=YP_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00825;old_locus_tag=YP0158%2CYP_0158 NC_005810.1 Protein Homology CDS 170984 171682 . + 0 ID=cds160;Parent=gene164;Dbxref=Genbank:WP_002208892.1;Name=WP_002208892.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NC_005810.1 RefSeq gene 171684 172724 . + . ID=gene165;Name=YP_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00830;old_locus_tag=YP0159%2CYP_0159 NC_005810.1 Protein Homology CDS 171684 172724 . + 0 ID=cds161;Parent=gene165;Dbxref=Genbank:WP_002208891.1;Name=WP_002208891.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_002208891.1;transl_table=11 NC_005810.1 RefSeq repeat_region 172805 172876 . + . ID=id34;Note=degenerate repeat region containing 4 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 172879 174291 . - . ID=gene166;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YP_RS00835;old_locus_tag=YP0160%2CYP_0160 NC_005810.1 Protein Homology CDS 172879 174291 . - 0 ID=cds162;Parent=gene166;Dbxref=Genbank:WP_002208890.1;Name=WP_002208890.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase 2;protein_id=WP_002208890.1;transl_table=11 NC_005810.1 RefSeq repeat_region 174320 174355 . + . ID=id35;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 174379 175185 . - . ID=gene167;Name=YP_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00840;old_locus_tag=YP0161%2CYP_0161 NC_005810.1 Protein Homology CDS 174379 175185 . - 0 ID=cds163;Parent=gene167;Dbxref=Genbank:WP_002208888.1;Name=WP_002208888.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11 NC_005810.1 RefSeq repeat_region 175239 175262 . + . ID=id36;Note=exact repeat region containing 2 copies of a 12 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 175364 175690 . - . ID=gene168;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YP_RS00845;old_locus_tag=YP0162%2CYP_0162 NC_005810.1 Protein Homology CDS 175364 175690 . - 0 ID=cds164;Parent=gene168;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11 NC_005810.1 RefSeq gene 175687 178233 . - . ID=gene169;Name=YP_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00850;old_locus_tag=YP0163%2CYP_0163 NC_005810.1 Protein Homology CDS 175687 178233 . - 0 ID=cds165;Parent=gene169;Dbxref=Genbank:WP_002208886.1;Name=WP_002208886.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_002208886.1;transl_table=11 NC_005810.1 RefSeq gene 178555 179853 . + . ID=gene170;Name=YP_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00855;old_locus_tag=YP0164%2CYP_0164 NC_005810.1 Protein Homology CDS 178555 179853 . + 0 ID=cds166;Parent=gene170;Dbxref=Genbank:WP_002228747.1;Name=WP_002228747.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NC_005810.1 RefSeq gene 179938 181122 . - . ID=gene171;Name=YP_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00860;old_locus_tag=YP0165%2CYP_0165 NC_005810.1 Protein Homology CDS 179938 181122 . - 0 ID=cds167;Parent=gene171;Dbxref=Genbank:WP_002215690.1;Name=WP_002215690.1;gbkey=CDS;product=protein TsgA;protein_id=WP_002215690.1;transl_table=11 NC_005810.1 RefSeq gene 181608 183668 . + . ID=gene172;Name=YP_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00865;old_locus_tag=YP0166%2CYP_0166 NC_005810.1 Protein Homology CDS 181608 183668 . + 0 ID=cds168;Parent=gene172;Dbxref=Genbank:WP_002208882.1;Name=WP_002208882.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002208882.1;transl_table=11 NC_005810.1 RefSeq repeat_region 181676 181705 . + . ID=id37;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 183717 183748 . + . ID=id38;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 183757 184743 . - . ID=gene173;Name=YP_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00870;old_locus_tag=YP0167%2CYP_0167 NC_005810.1 Protein Homology CDS 183757 184743 . - 0 ID=cds169;Parent=gene173;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NC_005810.1 RefSeq repeat_region 184859 184898 . + . ID=id39;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 184992 186305 . - . ID=gene174;Name=YP_RS00875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS00875;old_locus_tag=YP0168;pseudo=true NC_005810.1 Protein Homology CDS 184992 186305 . - 0 ID=cds170;Parent=gene174;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=diacetylchitobiose-6-phosphate hydrolase;pseudo=true;transl_except=(pos:complement(185727..185729)%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 186821 187390 . + . ID=gene175;Name=YP_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00880;old_locus_tag=YP0169%2CYP_0169 NC_005810.1 Protein Homology CDS 186821 187390 . + 0 ID=cds171;Parent=gene175;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11 NC_005810.1 RefSeq gene 187716 189257 . + . ID=gene176;Name=YP_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00885;old_locus_tag=YP0170%2CYP_0170 NC_005810.1 Protein Homology CDS 187716 189257 . + 0 ID=cds172;Parent=gene176;Dbxref=Genbank:WP_002215686.1;Name=WP_002215686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215686.1;transl_table=11 NC_005810.1 RefSeq repeat_region 189400 189429 . + . ID=id40;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 189500 190075 . + . ID=gene177;Name=YP_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00890;old_locus_tag=YP0171%2CYP_0171 NC_005810.1 Protein Homology CDS 189500 190075 . + 0 ID=cds173;Parent=gene177;Dbxref=Genbank:WP_002223842.1;Name=WP_002223842.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_002223842.1;transl_table=11 NC_005810.1 RefSeq gene 190208 191425 . + . ID=gene178;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YP_RS00895;old_locus_tag=YP0172%2CYP_0172 NC_005810.1 Protein Homology CDS 190208 191425 . + 0 ID=cds174;Parent=gene178;Dbxref=Genbank:WP_016595175.1;Name=WP_016595175.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=succinyldiaminopimelate aminotransferase;protein_id=WP_016595175.1;transl_table=11 NC_005810.1 RefSeq repeat_region 191462 191631 . + . ID=id41;gbkey=repeat_region NC_005810.1 RefSeq gene 191651 193771 . - . ID=gene179;Name=YP_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00900;old_locus_tag=YP0173%2CYP_0173 NC_005810.1 Protein Homology CDS 191651 193771 . - 0 ID=cds175;Parent=gene179;Dbxref=Genbank:WP_002212296.1;Name=WP_002212296.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212296.1;transl_table=11 NC_005810.1 RefSeq gene 193857 194489 . - . ID=gene180;Name=YP_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00905;old_locus_tag=YP0174%2CYP_0174 NC_005810.1 Protein Homology CDS 193857 194489 . - 0 ID=cds176;Parent=gene180;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11 NC_005810.1 RefSeq gene 194825 195232 . + . ID=gene181;Name=YP_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00910;old_locus_tag=YP0175%2CYP_0175 NC_005810.1 Protein Homology CDS 194825 195232 . + 0 ID=cds177;Parent=gene181;Dbxref=Genbank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212298.1;transl_table=11 NC_005810.1 RefSeq gene 195304 195735 . + . ID=gene182;Name=YP_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00915;old_locus_tag=YP0176%2CYP_0176 NC_005810.1 Protein Homology CDS 195304 195735 . + 0 ID=cds178;Parent=gene182;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11 NC_005810.1 RefSeq gene 195913 196782 . - . ID=gene183;Name=YP_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00920;old_locus_tag=YP0177%2CYP_0177 NC_005810.1 Protein Homology CDS 195913 196782 . - 0 ID=cds179;Parent=gene183;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NC_005810.1 RefSeq gene 196931 197167 . - . ID=gene184;Name=YP_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00925;old_locus_tag=YP0178%2CYP_0178 NC_005810.1 Protein Homology CDS 196931 197167 . - 0 ID=cds180;Parent=gene184;Dbxref=Genbank:WP_002212301.1;Name=WP_002212301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212301.1;transl_table=11 NC_005810.1 RefSeq gene 197164 198144 . - . ID=gene185;Name=YP_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00930;old_locus_tag=YP0179%2CYP_0179 NC_005810.1 Protein Homology CDS 197164 198144 . - 0 ID=cds181;Parent=gene185;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NC_005810.1 RefSeq gene 198246 198848 . + . ID=gene186;Name=YP_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00935;old_locus_tag=YP0180%2CYP_0180 NC_005810.1 Protein Homology CDS 198246 198848 . + 0 ID=cds182;Parent=gene186;Dbxref=Genbank:WP_002212303.1;Name=WP_002212303.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002212303.1;transl_table=11 NC_005810.1 RefSeq gene 199051 200109 . + . ID=gene187;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YP_RS00940;old_locus_tag=YP0181%2CYP_0181 NC_005810.1 Protein Homology CDS 199051 200109 . + 0 ID=cds183;Parent=gene187;Dbxref=Genbank:WP_011171750.1;Name=WP_011171750.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_011171750.1;transl_table=11 NC_005810.1 RefSeq repeat_region 200070 200105 . + . ID=id42;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region;gene=tauA NC_005810.1 RefSeq gene 200118 200885 . + . ID=gene188;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YP_RS00945;old_locus_tag=YP0182%2CYP_0182 NC_005810.1 Protein Homology CDS 200118 200885 . + 0 ID=cds184;Parent=gene188;Dbxref=Genbank:WP_002212307.1;Name=WP_002212307.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_002212307.1;transl_table=11 NC_005810.1 RefSeq gene 200882 201736 . + . ID=gene189;Name=YP_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00950;old_locus_tag=YP0183%2CYP_0183 NC_005810.1 Protein Homology CDS 200882 201736 . + 0 ID=cds185;Parent=gene189;Dbxref=Genbank:WP_002212309.1;Name=WP_002212309.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_002212309.1;transl_table=11 NC_005810.1 RefSeq gene 201733 202581 . + . ID=gene190;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YP_RS00955;old_locus_tag=YP0184%2CYP_0184 NC_005810.1 Protein Homology CDS 201733 202581 . + 0 ID=cds186;Parent=gene190;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NC_005810.1 RefSeq gene 202594 203560 . - . ID=gene191;Name=YP_RS00960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS00960;old_locus_tag=YP0185;pseudo=true NC_005810.1 Protein Homology CDS 202594 203560 . - 0 ID=cds187;Parent=gene191;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyl transferase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 203653 204642 . - . ID=gene192;Name=YP_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00965;old_locus_tag=YP0186%2CYP_0186 NC_005810.1 Protein Homology CDS 203653 204642 . - 0 ID=cds188;Parent=gene192;Dbxref=Genbank:WP_002212312.1;Name=WP_002212312.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212312.1;transl_table=11 NC_005810.1 RefSeq gene 204777 206699 . - . ID=gene193;Name=YP_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00970;old_locus_tag=YP0187%2CYP_0187 NC_005810.1 Protein Homology CDS 204777 206699 . - 0 ID=cds189;Parent=gene193;Dbxref=Genbank:WP_002230378.1;Name=WP_002230378.1;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002230378.1;transl_table=11 NC_005810.1 RefSeq gene 206950 207498 . + . ID=gene194;Name=YP_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00975;old_locus_tag=YP0188%2CYP_0188 NC_005810.1 Protein Homology CDS 206950 207498 . + 0 ID=cds190;Parent=gene194;Dbxref=Genbank:WP_002215966.1;Name=WP_002215966.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NC_005810.1 RefSeq gene 207502 209310 . + . ID=gene195;Name=YP_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00980;old_locus_tag=YP0189%2CYP_0189 NC_005810.1 Protein Homology CDS 207502 209310 . + 0 ID=cds191;Parent=gene195;Dbxref=Genbank:WP_002212314.1;Name=WP_002212314.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_002212314.1;transl_table=11 NC_005810.1 RefSeq gene 209326 209547 . + . ID=gene196;Name=YP_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00985;old_locus_tag=YP0190%2CYP_0190 NC_005810.1 Protein Homology CDS 209326 209547 . + 0 ID=cds192;Parent=gene196;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11 NC_005810.1 RefSeq gene 209642 210223 . + . ID=gene197;Name=YP_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00990;old_locus_tag=YP0191%2CYP_0191 NC_005810.1 Protein Homology CDS 209642 210223 . + 0 ID=cds193;Parent=gene197;Dbxref=Genbank:WP_012230099.1;Name=WP_012230099.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_012230099.1;transl_table=11 NC_005810.1 RefSeq repeat_region 210377 210416 . + . ID=id43;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 210444 210662 . - . ID=gene198;Name=YP_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS00995;old_locus_tag=YP0193%2CYP_0193 NC_005810.1 Protein Homology CDS 210444 210662 . - 0 ID=cds194;Parent=gene198;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NC_005810.1 RefSeq gene 210977 211777 . + . ID=gene199;Name=YP_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01000;old_locus_tag=YP0194%2CYP_0194 NC_005810.1 Protein Homology CDS 210977 211777 . + 0 ID=cds195;Parent=gene199;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NC_005810.1 RefSeq gene 212031 212753 . + . ID=gene200;Name=YP_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01005;old_locus_tag=YP0195%2CYP_0195 NC_005810.1 Protein Homology CDS 212031 212753 . + 0 ID=cds196;Parent=gene200;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11 NC_005810.1 RefSeq gene 212753 213148 . + . ID=gene201;Name=YP_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01010;old_locus_tag=YP0196%2CYP_0196 NC_005810.1 Protein Homology CDS 212753 213148 . + 0 ID=cds197;Parent=gene201;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11 NC_005810.1 RefSeq gene 213148 213513 . + . ID=gene202;Name=YP_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01015;old_locus_tag=YP0197%2CYP_0197 NC_005810.1 Protein Homology CDS 213148 213513 . + 0 ID=cds198;Parent=gene202;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11 NC_005810.1 RefSeq gene 213533 213820 . + . ID=gene203;Name=YP_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01020;old_locus_tag=YP0198%2CYP_0198 NC_005810.1 Protein Homology CDS 213533 213820 . + 0 ID=cds199;Parent=gene203;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11 NC_005810.1 RefSeq gene 213958 214332 . + . ID=gene204;Name=YP_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01025;old_locus_tag=YP0199%2CYP_0199 NC_005810.1 Protein Homology CDS 213958 214332 . + 0 ID=cds200;Parent=gene204;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NC_005810.1 RefSeq gene 214429 214899 . + . ID=gene205;Name=YP_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01030;old_locus_tag=YP0200%2CYP_0200 NC_005810.1 Protein Homology CDS 214429 214899 . + 0 ID=cds201;Parent=gene205;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NC_005810.1 RefSeq gene 214993 217101 . + . ID=gene206;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YP_RS01035;old_locus_tag=YP0201%2CYP_0201 NC_005810.1 Protein Homology CDS 214993 217101 . + 0 ID=cds202;Parent=gene206;Dbxref=Genbank:WP_002212325.1;Name=WP_002212325.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NC_005810.1 RefSeq gene 217174 218358 . + . ID=gene207;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YP_RS01040;old_locus_tag=YP0202%2CYP_0202 NC_005810.1 Protein Homology CDS 217174 218358 . + 0 ID=cds203;Parent=gene207;Dbxref=Genbank:WP_002212326.1;Name=WP_002212326.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NC_005810.1 RefSeq repeat_region 218408 219136 . + . ID=id44;gbkey=repeat_region NC_005810.1 RefSeq region 218416 219127 . + . ID=id45;gbkey=mobile_element NC_005810.1 RefSeq gene 218561 219019 . + . ID=gene208;Name=YP_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01045;old_locus_tag=YP0203%2CYP_0203 NC_005810.1 Protein Homology CDS 218561 219019 . + 0 ID=cds204;Parent=gene208;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 219207 219401 . + . ID=gene209;Name=YP_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01050;old_locus_tag=YP0204%2CYP_0204 NC_005810.1 Protein Homology CDS 219207 219401 . + 0 ID=cds205;Parent=gene209;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NC_005810.1 RefSeq gene 219480 219953 . + . ID=gene210;Name=YP_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01055;old_locus_tag=YP0205%2CYP_0205 NC_005810.1 Protein Homology CDS 219480 219953 . + 0 ID=cds206;Parent=gene210;Dbxref=Genbank:WP_002212327.1;Name=WP_002212327.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_002212327.1;transl_table=11 NC_005810.1 RefSeq gene 220367 220678 . + . ID=gene211;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YP_RS01060;old_locus_tag=YP0206%2CYP_0206 NC_005810.1 Protein Homology CDS 220367 220678 . + 0 ID=cds207;Parent=gene211;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NC_005810.1 RefSeq gene 220711 221340 . + . ID=gene212;Name=YP_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01065;old_locus_tag=YP0207%2CYP_0207 NC_005810.1 Protein Homology CDS 220711 221340 . + 0 ID=cds208;Parent=gene212;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NC_005810.1 RefSeq gene 221357 221962 . + . ID=gene213;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YP_RS01070;old_locus_tag=YP0208%2CYP_0208 NC_005810.1 Protein Homology CDS 221357 221962 . + 0 ID=cds209;Parent=gene213;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NC_005810.1 RefSeq gene 221959 222261 . + . ID=gene214;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YP_RS01075;old_locus_tag=YP0209%2CYP_0209 NC_005810.1 Protein Homology CDS 221959 222261 . + 0 ID=cds210;Parent=gene214;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NC_005810.1 RefSeq gene 222278 223102 . + . ID=gene215;Name=YP_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01080;old_locus_tag=YP0210%2CYP_0210 NC_005810.1 Protein Homology CDS 222278 223102 . + 0 ID=cds211;Parent=gene215;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NC_005810.1 RefSeq gene 223117 223395 . + . ID=gene216;Name=YP_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01085;old_locus_tag=YP0211%2CYP_0211 NC_005810.1 Protein Homology CDS 223117 223395 . + 0 ID=cds212;Parent=gene216;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NC_005810.1 RefSeq gene 223410 223742 . + . ID=gene217;Name=YP_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01090;old_locus_tag=YP0212%2CYP_0212 NC_005810.1 Protein Homology CDS 223410 223742 . + 0 ID=cds213;Parent=gene217;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NC_005810.1 RefSeq gene 223760 224458 . + . ID=gene218;Name=YP_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01095;old_locus_tag=YP0213%2CYP_0213 NC_005810.1 Protein Homology CDS 223760 224458 . + 0 ID=cds214;Parent=gene218;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NC_005810.1 RefSeq gene 224471 224881 . + . ID=gene219;Name=YP_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01100;old_locus_tag=YP0214%2CYP_0214 NC_005810.1 Protein Homology CDS 224471 224881 . + 0 ID=cds215;Parent=gene219;Dbxref=Genbank:WP_002218940.1;Name=WP_002218940.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11 NC_005810.1 RefSeq gene 224881 225072 . + . ID=gene220;Name=YP_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01105;old_locus_tag=YP0215%2CYP_0215 NC_005810.1 Protein Homology CDS 224881 225072 . + 0 ID=cds216;Parent=gene220;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NC_005810.1 RefSeq gene 225072 225326 . + . ID=gene221;Name=YP_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01110;old_locus_tag=YP0216%2CYP_0216 NC_005810.1 Protein Homology CDS 225072 225326 . + 0 ID=cds217;Parent=gene221;Dbxref=Genbank:WP_002228135.1;Name=WP_002228135.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NC_005810.1 RefSeq gene 225507 225878 . + . ID=gene222;Name=YP_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01115;old_locus_tag=YP0217%2CYP_0217 NC_005810.1 Protein Homology CDS 225507 225878 . + 0 ID=cds218;Parent=gene222;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NC_005810.1 RefSeq gene 225889 226203 . + . ID=gene223;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YP_RS01120;old_locus_tag=YP0218%2CYP_0218 NC_005810.1 Protein Homology CDS 225889 226203 . + 0 ID=cds219;Parent=gene223;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NC_005810.1 RefSeq gene 226218 226757 . + . ID=gene224;Name=YP_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01125;old_locus_tag=YP0219%2CYP_0219 NC_005810.1 Protein Homology CDS 226218 226757 . + 0 ID=cds220;Parent=gene224;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NC_005810.1 RefSeq gene 226771 227076 . + . ID=gene225;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YP_RS01130;old_locus_tag=YP0220%2CYP_0220 NC_005810.1 Protein Homology CDS 226771 227076 . + 0 ID=cds221;Parent=gene225;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NC_005810.1 RefSeq gene 227110 227502 . + . ID=gene226;Name=YP_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01135;old_locus_tag=YP0221%2CYP_0221 NC_005810.1 Protein Homology CDS 227110 227502 . + 0 ID=cds222;Parent=gene226;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NC_005810.1 RefSeq gene 227517 228050 . + . ID=gene227;Name=YP_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01140;old_locus_tag=YP0222%2CYP_0222 NC_005810.1 Protein Homology CDS 227517 228050 . + 0 ID=cds223;Parent=gene227;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NC_005810.1 RefSeq gene 228060 228413 . + . ID=gene228;Name=YP_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01145;old_locus_tag=YP0223%2CYP_0223 NC_005810.1 Protein Homology CDS 228060 228413 . + 0 ID=cds224;Parent=gene228;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NC_005810.1 RefSeq gene 228428 228931 . + . ID=gene229;Name=YP_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01150;old_locus_tag=YP0224%2CYP_0224 NC_005810.1 Protein Homology CDS 228428 228931 . + 0 ID=cds225;Parent=gene229;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NC_005810.1 RefSeq gene 228934 229113 . + . ID=gene230;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YP_RS01155;old_locus_tag=YP0225%2CYP_0225 NC_005810.1 Protein Homology CDS 228934 229113 . + 0 ID=cds226;Parent=gene230;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NC_005810.1 RefSeq gene 229117 229551 . + . ID=gene231;Name=YP_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01160;old_locus_tag=YP0226%2CYP_0226 NC_005810.1 Protein Homology CDS 229117 229551 . + 0 ID=cds227;Parent=gene231;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NC_005810.1 RefSeq gene 229559 230890 . + . ID=gene232;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=YP_RS01165;old_locus_tag=YP0227%2CYP_0227 NC_005810.1 Protein Homology CDS 229559 230890 . + 0 ID=cds228;Parent=gene232;Dbxref=Genbank:WP_002213344.1;Name=WP_002213344.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NC_005810.1 RefSeq gene 230924 231040 . + . ID=gene233;Name=YP_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01170;old_locus_tag=YP0228%2CYP_0228 NC_005810.1 Protein Homology CDS 230924 231040 . + 0 ID=cds229;Parent=gene233;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NC_005810.1 RefSeq gene 231188 231544 . + . ID=gene234;Name=YP_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01175;old_locus_tag=YP0229%2CYP_0229 NC_005810.1 Protein Homology CDS 231188 231544 . + 0 ID=cds230;Parent=gene234;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NC_005810.1 RefSeq gene 231561 231950 . + . ID=gene235;Name=YP_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01180;old_locus_tag=YP0230%2CYP_0230 NC_005810.1 Protein Homology CDS 231561 231950 . + 0 ID=cds231;Parent=gene235;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NC_005810.1 RefSeq gene 231981 232601 . + . ID=gene236;Name=YP_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01185;old_locus_tag=YP0231%2CYP_0231 NC_005810.1 Protein Homology CDS 231981 232601 . + 0 ID=cds232;Parent=gene236;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NC_005810.1 RefSeq gene 232627 233616 . + . ID=gene237;Name=YP_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01190;old_locus_tag=YP0232%2CYP_0232 NC_005810.1 Protein Homology CDS 232627 233616 . + 0 ID=cds233;Parent=gene237;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NC_005810.1 RefSeq gene 233657 234046 . + . ID=gene238;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YP_RS01195;old_locus_tag=YP0233%2CYP_0233 NC_005810.1 Protein Homology CDS 233657 234046 . + 0 ID=cds234;Parent=gene238;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NC_005810.1 RefSeq gene 234493 234918 . + . ID=gene239;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YP_RS01200;old_locus_tag=YP0234%2CYP_0234 NC_005810.1 Protein Homology CDS 234493 234918 . + 0 ID=cds235;Parent=gene239;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NC_005810.1 RefSeq gene 235006 235206 . + . ID=gene240;Name=YP_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01205;old_locus_tag=YP0235%2CYP_0235 NC_005810.1 Protein Homology CDS 235006 235206 . + 0 ID=cds236;Parent=gene240;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11 NC_005810.1 RefSeq gene 235316 235729 . - . ID=gene241;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YP_RS01210;old_locus_tag=YP0236%2CYP_0236 NC_005810.1 Protein Homology CDS 235316 235729 . - 0 ID=cds237;Parent=gene241;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11 NC_005810.1 RefSeq gene 235868 237244 . - . ID=gene242;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=YP_RS01215;old_locus_tag=YP0237%2CYP_0237 NC_005810.1 Protein Homology CDS 235868 237244 . - 0 ID=cds238;Parent=gene242;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11 NC_005810.1 RefSeq gene 237300 238589 . - . ID=gene243;Name=YP_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01220;old_locus_tag=YP0238%2CYP_0238 NC_005810.1 Protein Homology CDS 237300 238589 . - 0 ID=cds239;Parent=gene243;Dbxref=Genbank:WP_002215705.1;Name=WP_002215705.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_002215705.1;transl_table=11 NC_005810.1 RefSeq gene 238683 239630 . - . ID=gene244;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YP_RS01225;old_locus_tag=YP0239%2CYP_0239 NC_005810.1 Protein Homology CDS 238683 239630 . - 0 ID=cds240;Parent=gene244;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NC_005810.1 RefSeq gene 239655 240167 . - . ID=gene245;Name=YP_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01230;old_locus_tag=YP0240%2CYP_0240 NC_005810.1 Protein Homology CDS 239655 240167 . - 0 ID=cds241;Parent=gene245;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NC_005810.1 RefSeq gene 240302 241423 . + . ID=gene246;Name=YP_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01235;old_locus_tag=YP0241%2CYP_0241 NC_005810.1 Protein Homology CDS 240302 241423 . + 0 ID=cds242;Parent=gene246;Dbxref=Genbank:WP_002209022.1;Name=WP_002209022.1;gbkey=CDS;product=DNA processing protein DprA;protein_id=WP_002209022.1;transl_table=11 NC_005810.1 RefSeq gene 241395 241868 . + . ID=gene247;Name=YP_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01240;old_locus_tag=YP0242%2CYP_0242 NC_005810.1 Protein Homology CDS 241395 241868 . + 0 ID=cds243;Parent=gene247;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11 NC_005810.1 RefSeq gene 241909 242448 . + . ID=gene248;Name=YP_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01245;old_locus_tag=YP0243%2CYP_0243 NC_005810.1 Protein Homology CDS 241909 242448 . + 0 ID=cds244;Parent=gene248;Dbxref=Genbank:WP_002228134.1;Name=WP_002228134.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228134.1;transl_table=11 NC_005810.1 RefSeq gene 242450 243022 . + . ID=gene249;Name=YP_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01250;old_locus_tag=YP0244%2CYP_0244 NC_005810.1 Protein Homology CDS 242450 243022 . + 0 ID=cds245;Parent=gene249;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11 NC_005810.1 RefSeq gene 243031 243852 . + . ID=gene250;Name=YP_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01255;old_locus_tag=YP0245%2CYP_0245 NC_005810.1 Protein Homology CDS 243031 243852 . + 0 ID=cds246;Parent=gene250;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11 NC_005810.1 RefSeq gene 243907 244449 . - . ID=gene251;Name=YP_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01260;old_locus_tag=YP0246%2CYP_0246 NC_005810.1 Protein Homology CDS 243907 244449 . - 0 ID=cds247;Parent=gene251;Dbxref=Genbank:WP_002230372.1;Name=WP_002230372.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002230372.1;transl_table=11 NC_005810.1 RefSeq repeat_region 244632 250583 . + . ID=id46;gbkey=repeat_region NC_005810.1 RefSeq gene 244998 246546 . + . ID=gene252;Name=YP_RS01270;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS01270;old_locus_tag=16S_rRNA_2%2CYP_r4 NC_005810.1 RefSeq rRNA 244998 246546 . + . ID=rna4;Parent=gene252;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq exon 244998 246546 . + . ID=id47;Parent=rna4;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq gene 246646 246722 . + . ID=gene253;Name=YP_RS01275;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS01275;old_locus_tag=tRNA-Ile_1%2CYP_t2 NC_005810.1 tRNAscan-SE tRNA 246646 246722 . + . ID=rna5;Parent=gene253;anticodon=(pos:246680..246682);gbkey=tRNA;product=tRNA-Ile NC_005810.1 tRNAscan-SE exon 246646 246722 . + . ID=id48;Parent=rna5;anticodon=(pos:246680..246682);gbkey=tRNA;product=tRNA-Ile NC_005810.1 RefSeq gene 246774 246849 . + . ID=gene254;Name=YP_RS01280;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS01280;old_locus_tag=tRNA-Ala_1%2CYP_t3 NC_005810.1 tRNAscan-SE tRNA 246774 246849 . + . ID=rna6;Parent=gene254;anticodon=(pos:246807..246809);gbkey=tRNA;product=tRNA-Ala NC_005810.1 tRNAscan-SE exon 246774 246849 . + . ID=id49;Parent=rna6;anticodon=(pos:246807..246809);gbkey=tRNA;product=tRNA-Ala NC_005810.1 RefSeq gene 247059 249992 . + . ID=gene255;Name=YP_RS01285;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS01285;old_locus_tag=23S_rRNA_2%2CYP_r5 NC_005810.1 RefSeq rRNA 247059 249992 . + . ID=rna7;Parent=gene255;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq exon 247059 249992 . + . ID=id50;Parent=rna7;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq gene 250084 250199 . + . ID=gene256;Name=YP_RS01290;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS01290 NC_005810.1 cmsearch rRNA 250084 250199 . + . ID=rna8;Parent=gene256;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 250084 250199 . + . ID=id51;Parent=rna8;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq repeat_region 250216 250413 . + . ID=id52;Note=degenerate repeat region containing 3 copies of a 66bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 250221 250418 . + . ID=gene257;Name=YP_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22265 NC_005810.1 Protein Homology CDS 250221 250418 . + 0 ID=cds248;Parent=gene257;Dbxref=Genbank:WP_046155091.1;Name=WP_046155091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155091.1;transl_table=11 NC_005810.1 RefSeq gene 250666 250932 . + . ID=gene258;Name=YP_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01295;old_locus_tag=YP0247%2CYP_0247 NC_005810.1 Protein Homology CDS 250666 250932 . + 0 ID=cds249;Parent=gene258;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_005810.1 RefSeq gene 251289 251765 . + . ID=gene259;Name=YP_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01300 NC_005810.1 Protein Homology CDS 251289 251765 . + 0 ID=cds250;Parent=gene259;Dbxref=Genbank:WP_016674092.1;Name=WP_016674092.1;gbkey=CDS;product=integrase;protein_id=WP_016674092.1;transl_table=11 NC_005810.1 RefSeq gene 252187 252378 . + . ID=gene260;Name=YP_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01305 NC_005810.1 Protein Homology CDS 252187 252378 . + 0 ID=cds251;Parent=gene260;Dbxref=Genbank:WP_016595503.1;Name=WP_016595503.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016595503.1;transl_table=11 NC_005810.1 RefSeq repeat_region 252360 254890 . + . ID=id53;gbkey=repeat_region NC_005810.1 RefSeq region 252364 254316 . - . ID=id54;gbkey=mobile_element NC_005810.1 RefSeq gene 252429 253208 . - . ID=gene261;Name=YP_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01310;old_locus_tag=YP0249%2CYP_0249 NC_005810.1 Protein Homology CDS 252429 253208 . - 0 ID=cds252;Parent=gene261;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 253208 254230 . - . ID=gene262;Name=YP_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01315;old_locus_tag=YP0250%2CYP_0250 NC_005810.1 Protein Homology CDS 253208 254230 . - 0 ID=cds253;Parent=gene262;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq region 254317 254888 . + . ID=id55;Note=partial element;gbkey=mobile_element NC_005810.1 RefSeq gene 254322 254780 . + . ID=gene263;Name=YP_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01320;old_locus_tag=YP0251%2CYP_0251 NC_005810.1 Protein Homology CDS 254322 254780 . + 0 ID=cds254;Parent=gene263;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 254970 255176 . - . ID=gene264;Name=YP_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01325;old_locus_tag=YP0252%2CYP_0252 NC_005810.1 Protein Homology CDS 254970 255176 . - 0 ID=cds255;Parent=gene264;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NC_005810.1 RefSeq gene 255362 256114 . - . ID=gene265;Name=YP_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01330;old_locus_tag=YP0253%2CYP_0253 NC_005810.1 Protein Homology CDS 255362 256114 . - 0 ID=cds256;Parent=gene265;Dbxref=Genbank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NC_005810.1 RefSeq gene 256111 256731 . - . ID=gene266;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YP_RS01335;old_locus_tag=YP0254%2CYP_0254 NC_005810.1 Protein Homology CDS 256111 256731 . - 0 ID=cds257;Parent=gene266;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NC_005810.1 RefSeq gene 256741 256941 . - . ID=gene267;Name=YP_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01340;old_locus_tag=YP0255%2CYP_0255 NC_005810.1 Protein Homology CDS 256741 256941 . - 0 ID=cds258;Parent=gene267;Dbxref=Genbank:WP_002354912.1;Name=WP_002354912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354912.1;transl_table=11 NC_005810.1 RefSeq gene 257026 258069 . + . ID=gene268;Name=YP_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01345;old_locus_tag=YP0256%2CYP_0256 NC_005810.1 Protein Homology CDS 257026 258069 . + 0 ID=cds259;Parent=gene268;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NC_005810.1 RefSeq repeat_region 258281 258376 . + . ID=id56;gbkey=repeat_region NC_005810.1 RefSeq gene 258512 259711 . - . ID=gene269;Name=YP_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01350;old_locus_tag=YP0257%2CYP_0257 NC_005810.1 Protein Homology CDS 258512 259711 . - 0 ID=cds260;Parent=gene269;Dbxref=Genbank:WP_002209321.1;Name=WP_002209321.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_002209321.1;transl_table=11 NC_005810.1 RefSeq gene 259708 261246 . - . ID=gene270;Name=YP_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01355;old_locus_tag=YP0258%2CYP_0258 NC_005810.1 Protein Homology CDS 259708 261246 . - 0 ID=cds261;Parent=gene270;Dbxref=Genbank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;product=transporter HofB;protein_id=WP_002216083.1;transl_table=11 NC_005810.1 RefSeq gene 261239 261703 . - . ID=gene271;Name=YP_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01360;old_locus_tag=YP0259%2CYP_0259 NC_005810.1 Protein Homology CDS 261239 261703 . - 0 ID=cds262;Parent=gene271;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11 NC_005810.1 RefSeq gene 261906 262814 . - . ID=gene272;Name=YP_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01365;old_locus_tag=YP0260%2CYP_0260 NC_005810.1 Protein Homology CDS 261906 262814 . - 0 ID=cds263;Parent=gene272;Dbxref=Genbank:WP_002209324.1;Name=WP_002209324.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_002209324.1;transl_table=11 NC_005810.1 RefSeq gene 262927 263478 . + . ID=gene273;Name=YP_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01370;old_locus_tag=YP0261%2CYP_0261 NC_005810.1 Protein Homology CDS 262927 263478 . + 0 ID=cds264;Parent=gene273;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11 NC_005810.1 RefSeq gene 263751 264605 . + . ID=gene274;Name=YP_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01375;old_locus_tag=YP0262%2CYP_0262 NC_005810.1 Protein Homology CDS 263751 264605 . + 0 ID=cds265;Parent=gene274;Dbxref=Genbank:WP_002209326.1;Name=WP_002209326.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209326.1;transl_table=11 NC_005810.1 RefSeq repeat_region 264642 264671 . + . ID=id57;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 265038 266435 . - . ID=gene275;Name=YP_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01380;old_locus_tag=YP0263%2CYP_0263 NC_005810.1 Protein Homology CDS 265038 266435 . - 0 ID=cds266;Parent=gene275;Dbxref=Genbank:WP_002209327.1;Name=WP_002209327.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002209327.1;transl_table=11 NC_005810.1 RefSeq gene 267298 268062 . + . ID=gene276;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YP_RS01385;old_locus_tag=YP0264%2CYP_0264 NC_005810.1 Protein Homology CDS 267298 268062 . + 0 ID=cds267;Parent=gene276;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11 NC_005810.1 RefSeq gene 268258 270921 . + . ID=gene277;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YP_RS01390;old_locus_tag=YP0265%2CYP_0265 NC_005810.1 Protein Homology CDS 268258 270921 . + 0 ID=cds268;Parent=gene277;Dbxref=Genbank:WP_002209329.1;Name=WP_002209329.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_002209329.1;transl_table=11 NC_005810.1 RefSeq gene 270935 272464 . + . ID=gene278;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YP_RS01395;old_locus_tag=YP0266%2CYP_0266 NC_005810.1 Protein Homology CDS 270935 272464 . + 0 ID=cds269;Parent=gene278;Dbxref=Genbank:WP_002209330.1;Name=WP_002209330.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_002209330.1;transl_table=11 NC_005810.1 RefSeq gene 272770 274194 . + . ID=gene279;Name=YP_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01400;old_locus_tag=YP0268%2CYP_0268 NC_005810.1 Protein Homology CDS 272770 274194 . + 0 ID=cds270;Parent=gene279;Dbxref=Genbank:WP_002209332.1;Name=WP_002209332.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NC_005810.1 RefSeq repeat_region 274285 275006 . + . ID=id58;gbkey=repeat_region NC_005810.1 RefSeq region 274292 275003 . + . ID=id59;gbkey=mobile_element NC_005810.1 RefSeq gene 274292 274447 . + . ID=gene280;Name=YP_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01405 NC_005810.1 Protein Homology CDS 274292 274447 . + 0 ID=cds271;Parent=gene280;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_005810.1 RefSeq gene 274437 274895 . + . ID=gene281;Name=YP_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01410;old_locus_tag=YP0269%2CYP_0269 NC_005810.1 Protein Homology CDS 274437 274895 . + 0 ID=cds272;Parent=gene281;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 275465 278062 . + . ID=gene282;Name=YP_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01415;old_locus_tag=YP0270%2CYP_0270 NC_005810.1 Protein Homology CDS 275465 278062 . + 0 ID=cds273;Parent=gene282;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NC_005810.1 RefSeq gene 278361 278720 . + . ID=gene283;Name=YP_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01420;old_locus_tag=YP0271%2CYP_0271 NC_005810.1 Protein Homology CDS 278361 278720 . + 0 ID=cds274;Parent=gene283;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11 NC_005810.1 RefSeq gene 278831 279739 . - . ID=gene284;Name=YP_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01425;old_locus_tag=YP0272%2CYP_0272 NC_005810.1 Protein Homology CDS 278831 279739 . - 0 ID=cds275;Parent=gene284;Dbxref=Genbank:WP_002209335.1;Name=WP_002209335.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_002209335.1;transl_table=11 NC_005810.1 RefSeq repeat_region 279018 279059 . + . ID=id60;Note=exact repeat region containing 2 copies of a 21 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 280177 280971 . - . ID=gene285;Name=YP_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01430;old_locus_tag=YP0273%2CYP_0273 NC_005810.1 Protein Homology CDS 280177 280971 . - 0 ID=cds276;Parent=gene285;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11 NC_005810.1 RefSeq gene 281049 281939 . - . ID=gene286;Name=YP_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01435;old_locus_tag=YP0274%2CYP_0274 NC_005810.1 Protein Homology CDS 281049 281939 . - 0 ID=cds277;Parent=gene286;Dbxref=Genbank:WP_002209338.1;Name=WP_002209338.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_002209338.1;transl_table=11 NC_005810.1 RefSeq gene 282056 282403 . - . ID=gene287;Name=YP_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01440;old_locus_tag=YP0275%2CYP_0275 NC_005810.1 Protein Homology CDS 282056 282403 . - 0 ID=cds278;Parent=gene287;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11 NC_005810.1 RefSeq gene 282720 284321 . + . ID=gene288;Name=YP_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01445;old_locus_tag=YP0276%2CYP_0276 NC_005810.1 Protein Homology CDS 282720 284321 . + 0 ID=cds279;Parent=gene288;Dbxref=Genbank:WP_002209340.1;Name=WP_002209340.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=blue copper oxidase CueO;protein_id=WP_002209340.1;transl_table=11 NC_005810.1 RefSeq gene 284541 285077 . + . ID=gene289;Name=YP_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01450;old_locus_tag=YP0277%2CYP_0277 NC_005810.1 Protein Homology CDS 284541 285077 . + 0 ID=cds280;Parent=gene289;Dbxref=Genbank:WP_002228315.1;Name=WP_002228315.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002228315.1;transl_table=11 NC_005810.1 RefSeq gene 285231 285893 . - . ID=gene290;Name=YP_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01455;old_locus_tag=YP0278 NC_005810.1 Protein Homology CDS 285231 285893 . - 0 ID=cds281;Parent=gene290;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11 NC_005810.1 RefSeq gene 286129 287055 . + . ID=gene291;Name=YP_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01460;old_locus_tag=YP0279%2CYP_0279 NC_005810.1 Protein Homology CDS 286129 287055 . + 0 ID=cds282;Parent=gene291;Dbxref=Genbank:WP_002209343.1;Name=WP_002209343.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209343.1;transl_table=11 NC_005810.1 RefSeq gene 287052 287822 . + . ID=gene292;Name=YP_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01465;old_locus_tag=YP0280%2CYP_0280 NC_005810.1 Protein Homology CDS 287052 287822 . + 0 ID=cds283;Parent=gene292;Dbxref=Genbank:WP_002209344.1;Name=WP_002209344.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209344.1;transl_table=11 NC_005810.1 RefSeq gene 288029 289343 . + . ID=gene293;Name=YP_RS01470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS01470;old_locus_tag=YP0281;pseudo=true NC_005810.1 Protein Homology CDS 288029 289343 . + 0 ID=cds284;Parent=gene293;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 289492 289872 . - . ID=gene294;Name=YP_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01475;old_locus_tag=YP0282%2CYP_0282 NC_005810.1 Protein Homology CDS 289492 289872 . - 0 ID=cds285;Parent=gene294;Dbxref=Genbank:WP_002209347.1;Name=WP_002209347.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_002209347.1;transl_table=11 NC_005810.1 RefSeq gene 290283 291137 . - . ID=gene295;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YP_RS01480;old_locus_tag=YP0283%2CYP_0283 NC_005810.1 Protein Homology CDS 290283 291137 . - 0 ID=cds286;Parent=gene295;Dbxref=Genbank:WP_002209348.1;Name=WP_002209348.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_002209348.1;transl_table=11 NC_005810.1 RefSeq gene 291225 292022 . - . ID=gene296;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YP_RS01485;old_locus_tag=YP0284%2CYP_0284 NC_005810.1 Protein Homology CDS 291225 292022 . - 0 ID=cds287;Parent=gene296;Dbxref=Genbank:WP_002209349.1;Name=WP_002209349.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002209349.1;transl_table=11 NC_005810.1 RefSeq gene 292291 292770 . - . ID=gene297;Name=YP_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01490;old_locus_tag=YP0285%2CYP_0285 NC_005810.1 Protein Homology CDS 292291 292770 . - 0 ID=cds288;Parent=gene297;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11 NC_005810.1 RefSeq gene 292778 294199 . - . ID=gene298;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YP_RS01495;old_locus_tag=YP0286%2CYP_0286 NC_005810.1 Protein Homology CDS 292778 294199 . - 0 ID=cds289;Parent=gene298;Dbxref=Genbank:WP_041175924.1;Name=WP_041175924.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_041175924.1;transl_table=11 NC_005810.1 RefSeq gene 294342 295307 . - . ID=gene299;Name=YP_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01500;old_locus_tag=YP0287%2CYP_0287 NC_005810.1 Protein Homology CDS 294342 295307 . - 0 ID=cds290;Parent=gene299;Dbxref=Genbank:WP_002231130.1;Name=WP_002231130.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_002231130.1;transl_table=11 NC_005810.1 RefSeq repeat_region 295388 295417 . + . ID=id61;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 295548 295581 . + . ID=id62;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 295587 296042 . - . ID=gene300;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YP_RS01505;old_locus_tag=YP0288%2CYP_0288 NC_005810.1 Protein Homology CDS 295587 296042 . - 0 ID=cds291;Parent=gene300;Dbxref=Genbank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_002209354.1;transl_table=11 NC_005810.1 RefSeq gene 296212 296949 . - . ID=gene301;Name=YP_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01510;old_locus_tag=YP0289%2CYP_0289 NC_005810.1 Protein Homology CDS 296212 296949 . - 0 ID=cds292;Parent=gene301;Dbxref=Genbank:WP_002228221.1;Name=WP_002228221.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_002228221.1;transl_table=11 NC_005810.1 RefSeq gene 297062 297637 . - . ID=gene302;Name=YP_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01515;old_locus_tag=YP0290%2CYP_0290 NC_005810.1 Protein Homology CDS 297062 297637 . - 0 ID=cds293;Parent=gene302;Dbxref=Genbank:WP_002209356.1;Name=WP_002209356.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_002209356.1;transl_table=11 NC_005810.1 RefSeq gene 297678 300239 . + . ID=gene303;Name=YP_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01520;old_locus_tag=YP0291%2CYP_0291 NC_005810.1 Protein Homology CDS 297678 300239 . + 0 ID=cds294;Parent=gene303;Dbxref=Genbank:WP_002222096.1;Name=WP_002222096.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=RNA helicase;protein_id=WP_002222096.1;transl_table=11 NC_005810.1 RefSeq repeat_region 297683 297724 . + . ID=id63;Note=exact repeat region containing 2 copies of a 21 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 300348 302822 . + . ID=gene304;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=YP_RS01525;old_locus_tag=YP0292%2CYP_0292 NC_005810.1 Protein Homology CDS 300348 302822 . + 0 ID=cds295;Parent=gene304;Dbxref=Genbank:WP_002209358.1;Name=WP_002209358.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_002209358.1;transl_table=11 NC_005810.1 RefSeq gene 303144 303938 . + . ID=gene305;Name=YP_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01530;old_locus_tag=YP0293%2CYP_0293 NC_005810.1 Protein Homology CDS 303144 303938 . + 0 ID=cds296;Parent=gene305;Dbxref=Genbank:WP_002209359.1;Name=WP_002209359.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_002209359.1;transl_table=11 NC_005810.1 RefSeq gene 304115 305026 . + . ID=gene306;Name=YP_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01535;old_locus_tag=YP0294%2CYP_0294 NC_005810.1 Protein Homology CDS 304115 305026 . + 0 ID=cds297;Parent=gene306;Dbxref=Genbank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_002209360.1;transl_table=11 NC_005810.1 RefSeq gene 305023 307020 . + . ID=gene307;Name=YP_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01540;old_locus_tag=YP0295%2CYP_0295 NC_005810.1 Protein Homology CDS 305023 307020 . + 0 ID=cds298;Parent=gene307;Dbxref=Genbank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=WP_002209361.1;transl_table=11 NC_005810.1 RefSeq gene 307394 308674 . - . ID=gene308;Name=YP_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01545;old_locus_tag=YP0296%2CYP_0296 NC_005810.1 Protein Homology CDS 307394 308674 . - 0 ID=cds299;Parent=gene308;Dbxref=Genbank:WP_002209362.1;Name=WP_002209362.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002209362.1;transl_table=11 NC_005810.1 RefSeq repeat_region 308722 308763 . + . ID=id64;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 309055 310491 . + . ID=gene309;Name=YP_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01550;old_locus_tag=YP0297%2CYP_0297 NC_005810.1 Protein Homology CDS 309055 310491 . + 0 ID=cds300;Parent=gene309;Dbxref=Genbank:WP_002209364.1;Name=WP_002209364.1;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_002209364.1;transl_table=11 NC_005810.1 RefSeq repeat_region 310566 310605 . + . ID=id65;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 310627 310971 . + . ID=gene310;Name=YP_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01555;old_locus_tag=YP0298%2CYP_0298 NC_005810.1 Protein Homology CDS 310627 310971 . + 0 ID=cds301;Parent=gene310;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NC_005810.1 RefSeq repeat_region 311136 311186 . + . ID=id66;Note=degenerate repeat region containing 3 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 311256 311870 . - . ID=gene311;Name=YP_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01560;old_locus_tag=YP0299%2CYP_0299 NC_005810.1 Protein Homology CDS 311256 311870 . - 0 ID=cds302;Parent=gene311;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11 NC_005810.1 RefSeq gene 311870 312712 . - . ID=gene312;Name=YP_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01565;old_locus_tag=YP0300%2CYP_0300 NC_005810.1 Protein Homology CDS 311870 312712 . - 0 ID=cds303;Parent=gene312;Dbxref=Genbank:WP_002222100.1;Name=WP_002222100.1;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_002222100.1;transl_table=11 NC_005810.1 RefSeq gene 312712 313413 . - . ID=gene313;Name=YP_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01570;old_locus_tag=YP0301%2CYP_0301 NC_005810.1 Protein Homology CDS 312712 313413 . - 0 ID=cds304;Parent=gene313;Dbxref=Genbank:WP_002209368.1;Name=WP_002209368.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_002209368.1;transl_table=11 NC_005810.1 RefSeq gene 313707 315227 . + . ID=gene314;Name=YP_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01575;old_locus_tag=YP0302%2CYP_0302 NC_005810.1 Protein Homology CDS 313707 315227 . + 0 ID=cds305;Parent=gene314;Dbxref=Genbank:WP_002209369.1;Name=WP_002209369.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_002209369.1;transl_table=11 NC_005810.1 RefSeq gene 315425 316870 . + . ID=gene315;Name=YP_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01580;old_locus_tag=YP0303%2CYP_0303 NC_005810.1 Protein Homology CDS 315425 316870 . + 0 ID=cds306;Parent=gene315;Dbxref=Genbank:WP_002209370.1;Name=WP_002209370.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_002209370.1;transl_table=11 NC_005810.1 RefSeq repeat_region 316857 316888 . + . ID=id67;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 317029 319794 . - . ID=gene316;Name=YP_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01585;old_locus_tag=YP0304%2CYP_0304 NC_005810.1 Protein Homology CDS 317029 319794 . - 0 ID=cds307;Parent=gene316;Dbxref=Genbank:WP_011171754.1;Name=WP_011171754.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_011171754.1;transl_table=11 NC_005810.1 RefSeq gene 320238 322472 . + . ID=gene317;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YP_RS01590;old_locus_tag=YP0306%2CYP_0306 NC_005810.1 Protein Homology CDS 320238 322472 . + 0 ID=cds308;Parent=gene317;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11 NC_005810.1 RefSeq repeat_region 322500 322541 . + . ID=id68;Note=exact repeat region containing 2 copies of a 21 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 322509 322667 . + . ID=gene318;Name=YP_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01595;old_locus_tag=YP0307%2CYP_0307 NC_005810.1 Protein Homology CDS 322509 322667 . + 0 ID=cds309;Parent=gene318;Dbxref=Genbank:WP_002228225.1;Name=WP_002228225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228225.1;transl_table=11 NC_005810.1 RefSeq gene 322674 323516 . + . ID=gene319;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YP_RS01600;old_locus_tag=YP0308%2CYP_0308 NC_005810.1 Protein Homology CDS 322674 323516 . + 0 ID=cds310;Parent=gene319;Dbxref=Genbank:WP_002209374.1;Name=WP_002209374.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002209374.1;transl_table=11 NC_005810.1 RefSeq gene 323728 325365 . + . ID=gene320;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YP_RS01605;old_locus_tag=YP0309%2CYP_0309 NC_005810.1 Protein Homology CDS 323728 325365 . + 0 ID=cds311;Parent=gene320;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11 NC_005810.1 RefSeq gene 325446 326741 . + . ID=gene321;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YP_RS01610;old_locus_tag=YP0310%2CYP_0310 NC_005810.1 Protein Homology CDS 325446 326741 . + 0 ID=cds312;Parent=gene321;Dbxref=Genbank:WP_002209377.1;Name=WP_002209377.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_002209377.1;transl_table=11 NC_005810.1 RefSeq gene 327113 327718 . + . ID=gene322;Name=YP_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01615;old_locus_tag=YP0311%2CYP_0311 NC_005810.1 Protein Homology CDS 327113 327718 . + 0 ID=cds313;Parent=gene322;Dbxref=Genbank:WP_002218050.1;Name=WP_002218050.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002218050.1;transl_table=11 NC_005810.1 RefSeq repeat_region 327183 327254 . + . ID=id69;Note=degenerate repeat region containing 4 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 327822 328493 . + . ID=gene323;Name=YP_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01620;old_locus_tag=YP0312%2CYP_0312 NC_005810.1 Protein Homology CDS 327822 328493 . + 0 ID=cds314;Parent=gene323;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11 NC_005810.1 RefSeq gene 328727 329086 . - . ID=gene324;Name=YP_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01625;old_locus_tag=YP0313%2CYP_0313 NC_005810.1 Protein Homology CDS 328727 329086 . - 0 ID=cds315;Parent=gene324;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11 NC_005810.1 RefSeq gene 329479 331317 . + . ID=gene325;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YP_RS01630;old_locus_tag=YP0314%2CYP_0314 NC_005810.1 Protein Homology CDS 329479 331317 . + 0 ID=cds316;Parent=gene325;Dbxref=Genbank:WP_002223202.1;Name=WP_002223202.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_002223202.1;transl_table=11 NC_005810.1 RefSeq gene 331317 333047 . + . ID=gene326;Name=YP_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01635;old_locus_tag=YP0315%2CYP_0315 NC_005810.1 Protein Homology CDS 331317 333047 . + 0 ID=cds317;Parent=gene326;Dbxref=Genbank:WP_002209382.1;Name=WP_002209382.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_002209382.1;transl_table=11 NC_005810.1 RefSeq gene 333044 333770 . + . ID=gene327;Name=YP_RS01640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS01640;old_locus_tag=YP0316;pseudo=true NC_005810.1 Protein Homology CDS 333044 333770 . + 0 ID=cds318;Parent=gene327;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 333806 333985 . + . ID=id70;gbkey=repeat_region NC_005810.1 RefSeq gene 334013 334420 . - . ID=gene328;Name=YP_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01645;old_locus_tag=YP0317 NC_005810.1 Protein Homology CDS 334013 334420 . - 0 ID=cds319;Parent=gene328;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11 NC_005810.1 RefSeq gene 334595 334795 . - . ID=gene329;Name=YP_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01650;old_locus_tag=YP0318%2CYP_0318 NC_005810.1 Protein Homology CDS 334595 334795 . - 0 ID=cds320;Parent=gene329;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11 NC_005810.1 RefSeq gene 334888 335085 . + . ID=gene330;Name=YP_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01655;old_locus_tag=YP0319 NC_005810.1 Protein Homology CDS 334888 335085 . + 0 ID=cds321;Parent=gene330;Dbxref=Genbank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;product=membrane protein;protein_id=WP_002222261.1;transl_table=11 NC_005810.1 RefSeq gene 335386 336803 . + . ID=gene331;Name=YP_RS01660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS01660;old_locus_tag=YP0320;pseudo=true NC_005810.1 Protein Homology CDS 335386 336803 . + 0 ID=cds322;Parent=gene331;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sirohydrochlorin ferrochelatase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 336814 337722 . + . ID=gene332;Name=YP_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01665;old_locus_tag=YP0321%2CYP_0321 NC_005810.1 Protein Homology CDS 336814 337722 . + 0 ID=cds323;Parent=gene332;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11 NC_005810.1 RefSeq gene 337815 339251 . + . ID=gene333;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YP_RS01670;old_locus_tag=YP0322%2CYP_0322 NC_005810.1 Protein Homology CDS 337815 339251 . + 0 ID=cds324;Parent=gene333;Dbxref=Genbank:WP_002228227.1;Name=WP_002228227.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_002228227.1;transl_table=11 NC_005810.1 RefSeq gene 339253 339894 . + . ID=gene334;Name=YP_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01675;old_locus_tag=YP0323%2CYP_0323 NC_005810.1 Protein Homology CDS 339253 339894 . + 0 ID=cds325;Parent=gene334;Dbxref=Genbank:WP_002209388.1;Name=WP_002209388.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NC_005810.1 RefSeq gene 340085 340402 . + . ID=gene335;Name=YP_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01680;old_locus_tag=YP0324%2CYP_0324 NC_005810.1 Protein Homology CDS 340085 340402 . + 0 ID=cds326;Parent=gene335;Dbxref=Genbank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209389.1;transl_table=11 NC_005810.1 RefSeq gene 340716 341036 . + . ID=gene336;Name=YP_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01685;old_locus_tag=YP0325%2CYP_0325 NC_005810.1 Protein Homology CDS 340716 341036 . + 0 ID=cds327;Parent=gene336;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NC_005810.1 RefSeq gene 341040 341765 . + . ID=gene337;Name=YP_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01690;old_locus_tag=YP0326%2CYP_0326 NC_005810.1 Protein Homology CDS 341040 341765 . + 0 ID=cds328;Parent=gene337;Dbxref=Genbank:WP_002209391.1;Name=WP_002209391.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_002209391.1;transl_table=11 NC_005810.1 RefSeq gene 341904 342392 . + . ID=gene338;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YP_RS01695;old_locus_tag=YP0327%2CYP_0327 NC_005810.1 Protein Homology CDS 341904 342392 . + 0 ID=cds329;Parent=gene338;Dbxref=Genbank:WP_002209392.1;Name=WP_002209392.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NC_005810.1 RefSeq gene 342403 343452 . + . ID=gene339;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=YP_RS01700;old_locus_tag=YP0328%2CYP_0328 NC_005810.1 Protein Homology CDS 342403 343452 . + 0 ID=cds330;Parent=gene339;Dbxref=Genbank:WP_002209393.1;Name=WP_002209393.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_002209393.1;transl_table=11 NC_005810.1 RefSeq gene 343430 344194 . + . ID=gene340;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YP_RS01705;old_locus_tag=YP0329%2CYP_0329 NC_005810.1 Protein Homology CDS 343430 344194 . + 0 ID=cds331;Parent=gene340;Dbxref=Genbank:WP_002209394.1;Name=WP_002209394.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_002209394.1;transl_table=11 NC_005810.1 RefSeq gene 344188 344814 . + . ID=gene341;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YP_RS01710;old_locus_tag=YP0330%2CYP_0330 NC_005810.1 Protein Homology CDS 344188 344814 . + 0 ID=cds332;Parent=gene341;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NC_005810.1 RefSeq gene 344936 345919 . + . ID=gene342;Name=YP_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01715;old_locus_tag=YP0331%2CYP_0331 NC_005810.1 Protein Homology CDS 344936 345919 . + 0 ID=cds333;Parent=gene342;Dbxref=Genbank:WP_002209396.1;Name=WP_002209396.1;gbkey=CDS;product=lipoprotein nlpD;protein_id=WP_002209396.1;transl_table=11 NC_005810.1 RefSeq repeat_region 345355 345390 . + . ID=id71;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 345974 346972 . + . ID=gene343;Name=YP_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01720;old_locus_tag=YP0332%2CYP_0332 NC_005810.1 Protein Homology CDS 345974 346972 . + 0 ID=cds334;Parent=gene343;Dbxref=Genbank:WP_002209397.1;Name=WP_002209397.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_002209397.1;transl_table=11 NC_005810.1 RefSeq repeat_region 347198 347253 . + . ID=id72;gbkey=repeat_region NC_005810.1 RefSeq gene 347332 349887 . - . ID=gene344;Name=YP_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01725;old_locus_tag=YP0333%2CYP_0333 NC_005810.1 Protein Homology CDS 347332 349887 . - 0 ID=cds335;Parent=gene344;Dbxref=Genbank:WP_002209399.1;Name=WP_002209399.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_002209399.1;transl_table=11 NC_005810.1 RefSeq gene 350365 350499 . + . ID=gene345;Name=YP_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01730 NC_005810.1 Protein Homology CDS 350365 350499 . + 0 ID=cds336;Parent=gene345;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11 NC_005810.1 RefSeq gene 350662 351117 . - . ID=gene346;Name=YP_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01735;old_locus_tag=YP0334%2CYP_0334 NC_005810.1 Protein Homology CDS 350662 351117 . - 0 ID=cds337;Parent=gene346;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11 NC_005810.1 RefSeq gene 351600 352715 . + . ID=gene347;Name=YP_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01740;old_locus_tag=YP0335%2CYP_0335 NC_005810.1 Protein Homology CDS 351600 352715 . + 0 ID=cds338;Parent=gene347;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NC_005810.1 RefSeq gene 352779 353549 . + . ID=gene348;Name=YP_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01745;old_locus_tag=YP0336%2CYP_0336 NC_005810.1 Protein Homology CDS 352779 353549 . + 0 ID=cds339;Parent=gene348;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11 NC_005810.1 RefSeq gene 353636 354637 . + . ID=gene349;Name=YP_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01750;old_locus_tag=YP0337%2CYP_0337 NC_005810.1 Protein Homology CDS 353636 354637 . + 0 ID=cds340;Parent=gene349;Dbxref=Genbank:WP_002228229.1;Name=WP_002228229.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002228229.1;transl_table=11 NC_005810.1 RefSeq gene 354644 355318 . + . ID=gene350;Name=YP_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01755;old_locus_tag=YP0338%2CYP_0338 NC_005810.1 Protein Homology CDS 354644 355318 . + 0 ID=cds341;Parent=gene350;Dbxref=Genbank:WP_002209406.1;Name=WP_002209406.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002209406.1;transl_table=11 NC_005810.1 RefSeq gene 355439 356410 . - . ID=gene351;Name=YP_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01760;old_locus_tag=YP0339%2CYP_0339 NC_005810.1 Protein Homology CDS 355439 356410 . - 0 ID=cds342;Parent=gene351;Dbxref=Genbank:WP_002209407.1;Name=WP_002209407.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NC_005810.1 RefSeq repeat_region 356930 356961 . + . ID=id73;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 356965 358254 . - . ID=gene352;Name=YP_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01765;old_locus_tag=YP0340%2CYP_0340 NC_005810.1 Protein Homology CDS 356965 358254 . - 0 ID=cds343;Parent=gene352;Dbxref=Genbank:WP_002209408.1;Name=WP_002209408.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_002209408.1;transl_table=11 NC_005810.1 RefSeq gene 358339 358680 . - . ID=gene353;Name=YP_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01770;old_locus_tag=YP0341%2CYP_0341 NC_005810.1 Protein Homology CDS 358339 358680 . - 0 ID=cds344;Parent=gene353;Dbxref=Genbank:WP_002209409.1;Name=WP_002209409.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_002209409.1;transl_table=11 NC_005810.1 RefSeq gene 358927 359190 . - . ID=gene354;Name=YP_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01775;old_locus_tag=YP0342%2CYP_0342 NC_005810.1 Protein Homology CDS 358927 359190 . - 0 ID=cds345;Parent=gene354;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11 NC_005810.1 RefSeq gene 359401 359604 . - . ID=gene355;Name=YP_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01780;old_locus_tag=YP0343%2CYP_0343 NC_005810.1 Protein Homology CDS 359401 359604 . - 0 ID=cds346;Parent=gene355;Dbxref=Genbank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NC_005810.1 RefSeq gene 360028 360792 . - . ID=gene356;Name=YP_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01785;old_locus_tag=YP0344%2CYP_0344 NC_005810.1 Protein Homology CDS 360028 360792 . - 0 ID=cds347;Parent=gene356;Dbxref=Genbank:WP_002209411.1;Name=WP_002209411.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002209411.1;transl_table=11 NC_005810.1 RefSeq gene 360863 362242 . - . ID=gene357;Name=YP_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01790;old_locus_tag=YP0345%2CYP_0345 NC_005810.1 Protein Homology CDS 360863 362242 . - 0 ID=cds348;Parent=gene357;Dbxref=Genbank:WP_002209412.1;Name=WP_002209412.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209412.1;transl_table=11 NC_005810.1 RefSeq gene 362479 362730 . - . ID=gene358;Name=YP_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01795;old_locus_tag=YP0346%2CYP_0346 NC_005810.1 Protein Homology CDS 362479 362730 . - 0 ID=cds349;Parent=gene358;Dbxref=Genbank:WP_002223220.1;Name=WP_002223220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223220.1;transl_table=11 NC_005810.1 RefSeq gene 362903 364999 . + . ID=gene359;Name=YP_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01800;old_locus_tag=YP0347%2CYP_0347 NC_005810.1 Protein Homology CDS 362903 364999 . + 0 ID=cds350;Parent=gene359;Dbxref=Genbank:WP_002223222.1;Name=WP_002223222.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002223222.1;transl_table=11 NC_005810.1 RefSeq repeat_region 365108 365141 . + . ID=id74;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 365432 366619 . + . ID=gene360;Name=YP_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01805;old_locus_tag=YP0348%2CYP_0348 NC_005810.1 Protein Homology CDS 365432 366619 . + 0 ID=cds351;Parent=gene360;Dbxref=Genbank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002209414.1;transl_table=11 NC_005810.1 RefSeq gene 366782 367003 . + . ID=gene361;Name=YP_RS01810;gbkey=Gene;gene_biotype=other;locus_tag=YP_RS01810;old_locus_tag=YP0349%2CYP_0349 NC_005810.1 RefSeq repeat_region 366895 366984 . + . ID=id75;Note=degenerate repeat region containing 5 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 367013 367798 . - . ID=gene362;Name=YP_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01815;old_locus_tag=YP0350%2CYP_0350 NC_005810.1 Protein Homology CDS 367013 367798 . - 0 ID=cds352;Parent=gene362;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11 NC_005810.1 RefSeq gene 367795 368046 . - . ID=gene363;Name=YP_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01820;old_locus_tag=YP0351%2CYP_0351 NC_005810.1 Protein Homology CDS 367795 368046 . - 0 ID=cds353;Parent=gene363;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11 NC_005810.1 RefSeq gene 368229 369872 . - . ID=gene364;Name=YP_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01825;old_locus_tag=YP0352%2CYP_0352 NC_005810.1 Protein Homology CDS 368229 369872 . - 0 ID=cds354;Parent=gene364;Dbxref=Genbank:WP_002209418.1;Name=WP_002209418.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_002209418.1;transl_table=11 NC_005810.1 RefSeq gene 370270 371766 . - . ID=gene365;Name=YP_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01830;old_locus_tag=YP0353%2CYP_0353 NC_005810.1 Protein Homology CDS 370270 371766 . - 0 ID=cds355;Parent=gene365;Dbxref=Genbank:WP_002209419.1;Name=WP_002209419.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_002209419.1;transl_table=11 NC_005810.1 RefSeq gene 371777 372658 . - . ID=gene366;Name=YP_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01835;old_locus_tag=YP0354%2CYP_0354 NC_005810.1 Protein Homology CDS 371777 372658 . - 0 ID=cds356;Parent=gene366;Dbxref=Genbank:WP_002209420.1;Name=WP_002209420.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_002209420.1;transl_table=11 NC_005810.1 RefSeq gene 372864 373901 . - . ID=gene367;Name=YP_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01840;old_locus_tag=YP0355%2CYP_0355 NC_005810.1 Protein Homology CDS 372864 373901 . - 0 ID=cds357;Parent=gene367;Dbxref=Genbank:WP_002231123.1;Name=WP_002231123.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002231123.1;transl_table=11 NC_005810.1 RefSeq gene 373914 374903 . - . ID=gene368;Name=YP_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01845;old_locus_tag=YP0356%2CYP_0356 NC_005810.1 Protein Homology CDS 373914 374903 . - 0 ID=cds358;Parent=gene368;Dbxref=Genbank:WP_011171756.1;Name=WP_011171756.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011171756.1;transl_table=11 NC_005810.1 RefSeq gene 374896 376410 . - . ID=gene369;Name=YP_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01850;old_locus_tag=YP0357%2CYP_0357 NC_005810.1 Protein Homology CDS 374896 376410 . - 0 ID=cds359;Parent=gene369;Dbxref=Genbank:WP_002209422.1;Name=WP_002209422.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209422.1;transl_table=11 NC_005810.1 RefSeq gene 376559 377563 . - . ID=gene370;Name=YP_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01855;old_locus_tag=YP0358%2CYP_0358 NC_005810.1 Protein Homology CDS 376559 377563 . - 0 ID=cds360;Parent=gene370;Dbxref=Genbank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002216011.1;transl_table=11 NC_005810.1 RefSeq gene 377724 378533 . - . ID=gene371;Name=YP_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01860;old_locus_tag=YP0359%2CYP_0359 NC_005810.1 Protein Homology CDS 377724 378533 . - 0 ID=cds361;Parent=gene371;Dbxref=Genbank:WP_002231122.1;Name=WP_002231122.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002231122.1;transl_table=11 NC_005810.1 RefSeq gene 379236 379931 . + . ID=gene372;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YP_RS01865;old_locus_tag=YP0360%2CYP_0360 NC_005810.1 Protein Homology CDS 379236 379931 . + 0 ID=cds362;Parent=gene372;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NC_005810.1 RefSeq repeat_region 379931 379958 . + . ID=id76;Note=exact repeat region containing 2 copies of a 14 bp unit;gbkey=repeat_region;gene=araD NC_005810.1 RefSeq gene 380394 382844 . + . ID=gene373;Name=YP_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01870;old_locus_tag=YP0361%2CYP_0361 NC_005810.1 Protein Homology CDS 380394 382844 . + 0 ID=cds363;Parent=gene373;Dbxref=Genbank:WP_002209427.1;Name=WP_002209427.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002209427.1;transl_table=11 NC_005810.1 RefSeq gene 382856 383473 . + . ID=gene374;Name=YP_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01875;old_locus_tag=YP0362%2CYP_0362 NC_005810.1 Protein Homology CDS 382856 383473 . + 0 ID=cds364;Parent=gene374;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11 NC_005810.1 RefSeq gene 383475 384335 . + . ID=gene375;Name=YP_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01880;old_locus_tag=YP0363%2CYP_0363 NC_005810.1 Protein Homology CDS 383475 384335 . + 0 ID=cds365;Parent=gene375;Dbxref=Genbank:WP_002209429.1;Name=WP_002209429.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_002209429.1;transl_table=11 NC_005810.1 RefSeq repeat_region 384453 384480 . + . ID=id77;Note=exact repeat region containing 2 copies of a 14 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 384481 385191 . + . ID=gene376;Name=YP_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01885;old_locus_tag=YP0364%2CYP_0364 NC_005810.1 Protein Homology CDS 384481 385191 . + 0 ID=cds366;Parent=gene376;Dbxref=Genbank:WP_002209430.1;Name=WP_002209430.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_002209430.1;transl_table=11 NC_005810.1 RefSeq repeat_region 385432 385463 . + . ID=id78;Note=exact repeat region containing 2 copies of a 16 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 385448 385978 . - . ID=gene377;Name=YP_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01890;old_locus_tag=YP0365%2CYP_0365 NC_005810.1 Protein Homology CDS 385448 385978 . - 0 ID=cds367;Parent=gene377;Dbxref=Genbank:WP_002215100.1;Name=WP_002215100.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome b561;protein_id=WP_002215100.1;transl_table=11 NC_005810.1 RefSeq gene 386126 386509 . - . ID=gene378;Name=YP_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01895;old_locus_tag=YP0366%2CYP_0366 NC_005810.1 Protein Homology CDS 386126 386509 . - 0 ID=cds368;Parent=gene378;Dbxref=Genbank:WP_002215101.1;Name=WP_002215101.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_002215101.1;transl_table=11 NC_005810.1 RefSeq gene 386586 388799 . - . ID=gene379;Name=YP_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01900;old_locus_tag=YP0367%2CYP_0367 NC_005810.1 Protein Homology CDS 386586 388799 . - 0 ID=cds369;Parent=gene379;Dbxref=Genbank:WP_002209433.1;Name=WP_002209433.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_002209433.1;transl_table=11 NC_005810.1 RefSeq gene 389335 390276 . + . ID=gene380;Name=YP_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01905;old_locus_tag=YP0368%2CYP_0368 NC_005810.1 Protein Homology CDS 389335 390276 . + 0 ID=cds370;Parent=gene380;Dbxref=Genbank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11 NC_005810.1 RefSeq gene 390369 390986 . + . ID=gene381;Name=YP_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01910;old_locus_tag=YP0369%2CYP_0369 NC_005810.1 Protein Homology CDS 390369 390986 . + 0 ID=cds371;Parent=gene381;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11 NC_005810.1 RefSeq gene 390986 392509 . + . ID=gene382;Name=YP_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01915;old_locus_tag=YP0370%2CYP_0370 NC_005810.1 Protein Homology CDS 390986 392509 . + 0 ID=cds372;Parent=gene382;Dbxref=Genbank:WP_002209436.1;Name=WP_002209436.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209436.1;transl_table=11 NC_005810.1 RefSeq gene 392509 393651 . + . ID=gene383;Name=YP_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01920;old_locus_tag=YP0371%2CYP_0371 NC_005810.1 Protein Homology CDS 392509 393651 . + 0 ID=cds373;Parent=gene383;Dbxref=Genbank:WP_002354764.1;Name=WP_002354764.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002354764.1;transl_table=11 NC_005810.1 RefSeq gene 393897 394727 . + . ID=gene384;Name=YP_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01925;old_locus_tag=YP0372%2CYP_0372 NC_005810.1 Protein Homology CDS 393897 394727 . + 0 ID=cds374;Parent=gene384;Dbxref=Genbank:WP_002209438.1;Name=WP_002209438.1;gbkey=CDS;product=transketolase;protein_id=WP_002209438.1;transl_table=11 NC_005810.1 RefSeq gene 394720 395664 . + . ID=gene385;Name=YP_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01930;old_locus_tag=YP0373%2CYP_0373 NC_005810.1 Protein Homology CDS 394720 395664 . + 0 ID=cds375;Parent=gene385;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11 NC_005810.1 RefSeq gene 395667 397154 . + . ID=gene386;Name=YP_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01935;old_locus_tag=YP0374%2CYP_0374 NC_005810.1 Protein Homology CDS 395667 397154 . + 0 ID=cds376;Parent=gene386;Dbxref=Genbank:WP_002209440.1;Name=WP_002209440.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_002209440.1;transl_table=11 NC_005810.1 RefSeq gene 397175 398599 . + . ID=gene387;Name=YP_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01940;old_locus_tag=YP0375%2CYP_0375 NC_005810.1 Protein Homology CDS 397175 398599 . + 0 ID=cds377;Parent=gene387;Dbxref=Genbank:WP_002209441.1;Name=WP_002209441.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_002209441.1;transl_table=11 NC_005810.1 RefSeq gene 398821 399765 . - . ID=gene388;Name=YP_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01945;old_locus_tag=YP0376%2CYP_0376 NC_005810.1 Protein Homology CDS 398821 399765 . - 0 ID=cds378;Parent=gene388;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NC_005810.1 RefSeq gene 400013 401353 . - . ID=gene389;Name=YP_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01950;old_locus_tag=YP0377%2CYP_0377 NC_005810.1 Protein Homology CDS 400013 401353 . - 0 ID=cds379;Parent=gene389;Dbxref=Genbank:WP_002209444.1;Name=WP_002209444.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11 NC_005810.1 RefSeq gene 401670 402158 . + . ID=gene390;Name=YP_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01955;old_locus_tag=YP0378 NC_005810.1 Protein Homology CDS 401670 402158 . + 0 ID=cds380;Parent=gene390;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11 NC_005810.1 RefSeq gene 402273 403343 . + . ID=gene391;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YP_RS01960;old_locus_tag=YP0379%2CYP_0379 NC_005810.1 Protein Homology CDS 402273 403343 . + 0 ID=cds381;Parent=gene391;Dbxref=Genbank:WP_002209446.1;Name=WP_002209446.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_002209446.1;transl_table=11 NC_005810.1 RefSeq gene 403481 404044 . + . ID=gene392;Name=YP_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01965;old_locus_tag=YP0380%2CYP_0380 NC_005810.1 Protein Homology CDS 403481 404044 . + 0 ID=cds382;Parent=gene392;Dbxref=Genbank:WP_002209447.1;Name=WP_002209447.1;gbkey=CDS;product=regulatory protein RecX;protein_id=WP_002209447.1;transl_table=11 NC_005810.1 RefSeq gene 404184 406811 . + . ID=gene393;Name=YP_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01970;old_locus_tag=YP0381%2CYP_0381 NC_005810.1 Protein Homology CDS 404184 406811 . + 0 ID=cds383;Parent=gene393;Dbxref=Genbank:WP_002209448.1;Name=WP_002209448.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_002209448.1;transl_table=11 NC_005810.1 RefSeq gene 407061 407246 . + . ID=gene394;Name=YP_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01975;old_locus_tag=YP0382%2CYP_0382 NC_005810.1 Protein Homology CDS 407061 407246 . + 0 ID=cds384;Parent=gene394;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11 NC_005810.1 RefSeq gene 407609 407701 . + . ID=gene395;Name=YP_RS01980;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS01980;old_locus_tag=tRNA-Ser_1%2CYP_t4 NC_005810.1 tRNAscan-SE tRNA 407609 407701 . + . ID=rna9;Parent=gene395;anticodon=(pos:407643..407645);gbkey=tRNA;product=tRNA-Ser NC_005810.1 tRNAscan-SE exon 407609 407701 . + . ID=id79;Parent=rna9;anticodon=(pos:407643..407645);gbkey=tRNA;product=tRNA-Ser NC_005810.1 RefSeq gene 407710 407786 . + . ID=gene396;Name=YP_RS01985;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS01985;old_locus_tag=tRNA-Arg_1%2CYP_t5 NC_005810.1 tRNAscan-SE tRNA 407710 407786 . + . ID=rna10;Parent=gene396;anticodon=(pos:407744..407746);gbkey=tRNA;product=tRNA-Arg NC_005810.1 tRNAscan-SE exon 407710 407786 . + . ID=id80;Parent=rna10;anticodon=(pos:407744..407746);gbkey=tRNA;product=tRNA-Arg NC_005810.1 RefSeq gene 407866 407942 . + . ID=gene397;Name=YP_RS01990;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS01990;old_locus_tag=tRNA-Arg_2%2CYP_t6 NC_005810.1 tRNAscan-SE tRNA 407866 407942 . + . ID=rna11;Parent=gene397;anticodon=(pos:407900..407902);gbkey=tRNA;product=tRNA-Arg NC_005810.1 tRNAscan-SE exon 407866 407942 . + . ID=id81;Parent=rna11;anticodon=(pos:407900..407902);gbkey=tRNA;product=tRNA-Arg NC_005810.1 RefSeq gene 408365 408931 . + . ID=gene398;Name=YP_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS01995;old_locus_tag=YP0383%2CYP_0383 NC_005810.1 Protein Homology CDS 408365 408931 . + 0 ID=cds385;Parent=gene398;Dbxref=Genbank:WP_011171758.1;Name=WP_011171758.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_011171758.1;transl_table=11 NC_005810.1 RefSeq gene 408928 409356 . + . ID=gene399;Name=YP_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02000;old_locus_tag=YP0384%2CYP_0384 NC_005810.1 Protein Homology CDS 408928 409356 . + 0 ID=cds386;Parent=gene399;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11 NC_005810.1 RefSeq gene 409439 410998 . + . ID=gene400;Name=YP_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02005;old_locus_tag=YP0385%2CYP_0385 NC_005810.1 Protein Homology CDS 409439 410998 . + 0 ID=cds387;Parent=gene400;Dbxref=Genbank:WP_002228236.1;Name=WP_002228236.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_002228236.1;transl_table=11 NC_005810.1 RefSeq gene 411166 411681 . + . ID=gene401;Name=YP_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02010;old_locus_tag=YP0386%2CYP_0386 NC_005810.1 Protein Homology CDS 411166 411681 . + 0 ID=cds388;Parent=gene401;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NC_005810.1 RefSeq gene 411770 413053 . - . ID=gene402;Name=YP_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02015;old_locus_tag=YP0387%2CYP_0387 NC_005810.1 Protein Homology CDS 411770 413053 . - 0 ID=cds389;Parent=gene402;Dbxref=Genbank:WP_002209454.1;Name=WP_002209454.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209454.1;transl_table=11 NC_005810.1 RefSeq gene 413122 413913 . - . ID=gene403;Name=YP_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02020;old_locus_tag=YP0388%2CYP_0388 NC_005810.1 Protein Homology CDS 413122 413913 . - 0 ID=cds390;Parent=gene403;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11 NC_005810.1 RefSeq gene 414079 415440 . + . ID=gene404;Name=YP_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02025;old_locus_tag=YP0389%2CYP_0389 NC_005810.1 Protein Homology CDS 414079 415440 . + 0 ID=cds391;Parent=gene404;Dbxref=Genbank:WP_002209456.1;Name=WP_002209456.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_002209456.1;transl_table=11 NC_005810.1 RefSeq gene 415668 415916 . + . ID=gene405;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YP_RS02030;old_locus_tag=YP0391%2CYP_0391 NC_005810.1 Protein Homology CDS 415668 415916 . + 0 ID=cds392;Parent=gene405;Dbxref=Genbank:WP_002209458.1;Name=WP_002209458.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NC_005810.1 RefSeq gene 415938 416486 . + . ID=gene406;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YP_RS02035;old_locus_tag=YP0392%2CYP_0392 NC_005810.1 Protein Homology CDS 415938 416486 . + 0 ID=cds393;Parent=gene406;Dbxref=Genbank:WP_002209459.1;Name=WP_002209459.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_002209459.1;transl_table=11 NC_005810.1 RefSeq gene 416525 417265 . + . ID=gene407;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YP_RS02040;old_locus_tag=YP0393%2CYP_0393 NC_005810.1 Protein Homology CDS 416525 417265 . + 0 ID=cds394;Parent=gene407;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11 NC_005810.1 RefSeq gene 417346 417693 . + . ID=gene408;Name=YP_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02045;old_locus_tag=YP0394%2CYP_0394 NC_005810.1 Protein Homology CDS 417346 417693 . + 0 ID=cds395;Parent=gene408;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NC_005810.1 RefSeq gene 417955 418722 . - . ID=gene409;Name=YP_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02050;old_locus_tag=YP0395%2CYP_0395 NC_005810.1 Protein Homology CDS 417955 418722 . - 0 ID=cds396;Parent=gene409;Dbxref=Genbank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209462.1;transl_table=11 NC_005810.1 RefSeq gene 419045 420390 . - . ID=gene410;Name=YP_RS02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS02055;old_locus_tag=YP0396;pseudo=true NC_005810.1 Protein Homology CDS 419045 420390 . - 0 ID=cds397;Parent=gene410;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;exception=annotated by transcript or proteomic data;gbkey=CDS;product=C4-dicarboxylate transporter;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 420819 421535 . - . ID=gene411;Name=YP_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02060;old_locus_tag=YP0397%2CYP_0397 NC_005810.1 Protein Homology CDS 420819 421535 . - 0 ID=cds398;Parent=gene411;Dbxref=Genbank:WP_002223245.1;Name=WP_002223245.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002223245.1;transl_table=11 NC_005810.1 RefSeq gene 421767 422837 . + . ID=gene412;Name=YP_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02065;old_locus_tag=YP0398%2CYP_0398 NC_005810.1 Protein Homology CDS 421767 422837 . + 0 ID=cds399;Parent=gene412;Dbxref=Genbank:WP_002228238.1;Name=WP_002228238.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002228238.1;transl_table=11 NC_005810.1 RefSeq gene 422850 423971 . + . ID=gene413;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YP_RS02070;old_locus_tag=YP0399%2CYP_0399 NC_005810.1 Protein Homology CDS 422850 423971 . + 0 ID=cds400;Parent=gene413;Dbxref=Genbank:WP_002209465.1;Name=WP_002209465.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_002209465.1;transl_table=11 NC_005810.1 RefSeq gene 424076 425233 . - . ID=gene414;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=YP_RS02075;old_locus_tag=YP0400%2CYP_0400 NC_005810.1 Protein Homology CDS 424076 425233 . - 0 ID=cds401;Parent=gene414;Dbxref=Genbank:WP_002228330.1;Name=WP_002228330.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_002228330.1;transl_table=11 NC_005810.1 RefSeq repeat_region 425435 427393 . + . ID=id82;gbkey=repeat_region NC_005810.1 RefSeq region 425440 427392 . - . ID=id83;gbkey=mobile_element NC_005810.1 RefSeq gene 425505 426284 . - . ID=gene415;Name=YP_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02080;old_locus_tag=YP0401%2CYP_0401 NC_005810.1 Protein Homology CDS 425505 426284 . - 0 ID=cds402;Parent=gene415;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 426284 427306 . - . ID=gene416;Name=YP_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02085;old_locus_tag=YP0402%2CYP_0402 NC_005810.1 Protein Homology CDS 426284 427306 . - 0 ID=cds403;Parent=gene416;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 427365 428351 . + . ID=gene417;Name=YP_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02090;old_locus_tag=YP0403 NC_005810.1 Protein Homology CDS 427365 428351 . + 0 ID=cds404;Parent=gene417;Dbxref=Genbank:WP_002209028.1;Name=WP_002209028.1;gbkey=CDS;product=hydrolase;protein_id=WP_002209028.1;transl_table=11 NC_005810.1 RefSeq gene 428425 430080 . - . ID=gene418;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YP_RS02095;old_locus_tag=YP0404%2CYP_0404 NC_005810.1 Protein Homology CDS 428425 430080 . - 0 ID=cds405;Parent=gene418;Dbxref=Genbank:WP_002209029.1;Name=WP_002209029.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_002209029.1;transl_table=11 NC_005810.1 RefSeq gene 430077 430388 . - . ID=gene419;Name=YP_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02100;old_locus_tag=YP0405%2CYP_0405 NC_005810.1 Protein Homology CDS 430077 430388 . - 0 ID=cds406;Parent=gene419;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11 NC_005810.1 RefSeq gene 430445 432403 . - . ID=gene420;Name=YP_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02105;old_locus_tag=YP0406%2CYP_0406 NC_005810.1 Protein Homology CDS 430445 432403 . - 0 ID=cds407;Parent=gene420;Dbxref=Genbank:WP_002209031.1;Name=WP_002209031.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_002209031.1;transl_table=11 NC_005810.1 RefSeq gene 433307 434575 . + . ID=gene421;Name=YP_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02110;old_locus_tag=YP0407%2CYP_0407 NC_005810.1 Protein Homology CDS 433307 434575 . + 0 ID=cds408;Parent=gene421;Dbxref=Genbank:WP_002230435.1;Name=WP_002230435.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_002230435.1;transl_table=11 NC_005810.1 RefSeq repeat_region 434687 434720 . + . ID=id84;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 434753 435385 . - . ID=gene422;Name=YP_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02115;old_locus_tag=YP0408%2CYP_0408 NC_005810.1 Protein Homology CDS 434753 435385 . - 0 ID=cds409;Parent=gene422;Dbxref=Genbank:WP_002209034.1;Name=WP_002209034.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209034.1;transl_table=11 NC_005810.1 RefSeq gene 435398 438217 . - . ID=gene423;Name=YP_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02120;old_locus_tag=YP0409%2CYP_0409 NC_005810.1 Protein Homology CDS 435398 438217 . - 0 ID=cds410;Parent=gene423;Dbxref=Genbank:WP_002209035.1;Name=WP_002209035.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_002209035.1;transl_table=11 NC_005810.1 RefSeq gene 438461 439960 . + . ID=gene424;Name=YP_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02125;old_locus_tag=YP0410%2CYP_0410 NC_005810.1 Protein Homology CDS 438461 439960 . + 0 ID=cds411;Parent=gene424;Dbxref=Genbank:WP_002353603.1;Name=WP_002353603.1;gbkey=CDS;product=type II secretory pathway protein;protein_id=WP_002353603.1;transl_table=11 NC_005810.1 RefSeq gene 439962 441176 . + . ID=gene425;Name=YP_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02130;old_locus_tag=YP0411%2CYP_0411 NC_005810.1 Protein Homology CDS 439962 441176 . + 0 ID=cds412;Parent=gene425;Dbxref=Genbank:WP_002209037.1;Name=WP_002209037.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_002209037.1;transl_table=11 NC_005810.1 RefSeq gene 441195 441416 . + . ID=gene426;Name=YP_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02135;old_locus_tag=YP0412%2CYP_0412 NC_005810.1 Protein Homology CDS 441195 441416 . + 0 ID=cds413;Parent=gene426;Dbxref=Genbank:WP_002209038.1;Name=WP_002209038.1;gbkey=CDS;product=type III secretion system protein%2C YseE family;protein_id=WP_002209038.1;transl_table=11 NC_005810.1 RefSeq gene 441523 442230 . + . ID=gene427;Name=YP_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02140;old_locus_tag=YP0413%2CYP_0413 NC_005810.1 Protein Homology CDS 441523 442230 . + 0 ID=cds414;Parent=gene427;Dbxref=Genbank:WP_011171760.1;Name=WP_011171760.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011171760.1;transl_table=11 NC_005810.1 RefSeq gene 442240 442455 . + . ID=gene428;Name=YP_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02145;old_locus_tag=YP0414%2CYP_0414 NC_005810.1 Protein Homology CDS 442240 442455 . + 0 ID=cds415;Parent=gene428;Dbxref=Genbank:WP_002216328.1;Name=WP_002216328.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002216328.1;transl_table=11 NC_005810.1 RefSeq gene 442452 442700 . + . ID=gene429;Name=YP_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02150;old_locus_tag=YP0415%2CYP_0415 NC_005810.1 Protein Homology CDS 442452 442700 . + 0 ID=cds416;Parent=gene429;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11 NC_005810.1 RefSeq gene 442798 443049 . + . ID=gene430;Name=YP_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02155;old_locus_tag=YP0416%2CYP_0416 NC_005810.1 Protein Homology CDS 442798 443049 . + 0 ID=cds417;Parent=gene430;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11 NC_005810.1 RefSeq gene 443046 443777 . + . ID=gene431;Name=YP_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02160;old_locus_tag=YP0417%2CYP_0417 NC_005810.1 Protein Homology CDS 443046 443777 . + 0 ID=cds418;Parent=gene431;Dbxref=Genbank:WP_002209042.1;Name=WP_002209042.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_002209042.1;transl_table=11 NC_005810.1 RefSeq repeat_region 443769 443808 . + . ID=id85;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 443952 444545 . + . ID=gene432;Name=YP_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02165;old_locus_tag=YP0418%2CYP_0418 NC_005810.1 Protein Homology CDS 443952 444545 . + 0 ID=cds419;Parent=gene432;Dbxref=Genbank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209043.1;transl_table=11 NC_005810.1 RefSeq gene 444542 445189 . + . ID=gene433;Name=YP_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02170;old_locus_tag=YP0419%2CYP_0419 NC_005810.1 Protein Homology CDS 444542 445189 . + 0 ID=cds420;Parent=gene433;Dbxref=Genbank:WP_002216333.1;Name=WP_002216333.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_002216333.1;transl_table=11 NC_005810.1 RefSeq gene 445176 447230 . + . ID=gene434;Name=YP_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02175;old_locus_tag=YP0420%2CYP_0420 NC_005810.1 Protein Homology CDS 445176 447230 . + 0 ID=cds421;Parent=gene434;Dbxref=Genbank:WP_002356788.1;Name=WP_002356788.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_002356788.1;transl_table=11 NC_005810.1 RefSeq gene 447217 448554 . + . ID=gene435;Name=YP_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02180;old_locus_tag=YP0421%2CYP_0421 NC_005810.1 Protein Homology CDS 447217 448554 . + 0 ID=cds422;Parent=gene435;Dbxref=Genbank:WP_002209046.1;Name=WP_002209046.1;gbkey=CDS;product=type III secretion system ATPase;protein_id=WP_002209046.1;transl_table=11 NC_005810.1 RefSeq gene 448551 448952 . + . ID=gene436;Name=YP_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02185;old_locus_tag=YP0422%2CYP_0422 NC_005810.1 Protein Homology CDS 448551 448952 . + 0 ID=cds423;Parent=gene436;Dbxref=Genbank:WP_002209047.1;Name=WP_002209047.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209047.1;transl_table=11 NC_005810.1 RefSeq gene 448933 449331 . + . ID=gene437;Name=YP_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02190;old_locus_tag=YP0423%2CYP_0423 NC_005810.1 Protein Homology CDS 448933 449331 . + 0 ID=cds424;Parent=gene437;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NC_005810.1 RefSeq gene 449309 450271 . + . ID=gene438;Name=YP_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02195;old_locus_tag=YP0424%2CYP_0424 NC_005810.1 Protein Homology CDS 449309 450271 . + 0 ID=cds425;Parent=gene438;Dbxref=Genbank:WP_002209049.1;Name=WP_002209049.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_002209049.1;transl_table=11 NC_005810.1 RefSeq gene 450398 451048 . + . ID=gene439;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YP_RS02200;old_locus_tag=YP0425%2CYP_0425 NC_005810.1 Protein Homology CDS 450398 451048 . + 0 ID=cds426;Parent=gene439;Dbxref=Genbank:WP_002221023.1;Name=WP_002221023.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=flagellar biosynthesis protein FliP;protein_id=WP_002221023.1;transl_table=11 NC_005810.1 RefSeq gene 451045 451338 . + . ID=gene440;Name=YP_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02205;old_locus_tag=YP0426%2CYP_0426 NC_005810.1 Protein Homology CDS 451045 451338 . + 0 ID=cds427;Parent=gene440;Dbxref=Genbank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_002209051.1;transl_table=11 NC_005810.1 RefSeq gene 451340 452134 . + . ID=gene441;Name=YP_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02210;old_locus_tag=YP0427%2CYP_0427 NC_005810.1 Protein Homology CDS 451340 452134 . + 0 ID=cds428;Parent=gene441;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11 NC_005810.1 RefSeq gene 452124 453191 . + . ID=gene442;Name=YP_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02215;old_locus_tag=YP0428%2CYP_0428 NC_005810.1 Protein Homology CDS 452124 453191 . + 0 ID=cds429;Parent=gene442;Dbxref=Genbank:WP_002209053.1;Name=WP_002209053.1;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_002209053.1;transl_table=11 NC_005810.1 RefSeq repeat_region 453310 453481 . + . ID=id86;gbkey=repeat_region NC_005810.1 RefSeq gene 453574 454788 . + . ID=gene443;Name=YP_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02220;old_locus_tag=YP0429%2CYP_0429 NC_005810.1 Protein Homology CDS 453574 454788 . + 0 ID=cds430;Parent=gene443;Dbxref=Genbank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209054.1;transl_table=11 NC_005810.1 RefSeq gene 454785 455054 . + . ID=gene444;Name=YP_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02225;old_locus_tag=YP0430%2CYP_0430 NC_005810.1 Protein Homology CDS 454785 455054 . + 0 ID=cds431;Parent=gene444;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11 NC_005810.1 RefSeq gene 455132 456115 . - . ID=gene445;Name=YP_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02230;old_locus_tag=YP0431%2CYP_0431 NC_005810.1 Protein Homology CDS 455132 456115 . - 0 ID=cds432;Parent=gene445;Dbxref=Genbank:WP_002209056.1;Name=WP_002209056.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11 NC_005810.1 RefSeq gene 456285 457571 . + . ID=gene446;Name=YP_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02235;old_locus_tag=YP0432%2CYP_0432 NC_005810.1 Protein Homology CDS 456285 457571 . + 0 ID=cds433;Parent=gene446;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11 NC_005810.1 RefSeq gene 457617 458798 . + . ID=gene447;Name=YP_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02240;old_locus_tag=YP0433%2CYP_0433 NC_005810.1 Protein Homology CDS 457617 458798 . + 0 ID=cds434;Parent=gene447;Dbxref=Genbank:WP_002215044.1;Name=WP_002215044.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002215044.1;transl_table=11 NC_005810.1 RefSeq gene 458939 459739 . - . ID=gene448;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=YP_RS02245;old_locus_tag=YP0434%2CYP_0434 NC_005810.1 Protein Homology CDS 458939 459739 . - 0 ID=cds435;Parent=gene448;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11 NC_005810.1 RefSeq gene 459732 460736 . - . ID=gene449;Name=YP_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02250;old_locus_tag=YP0435%2CYP_0435 NC_005810.1 Protein Homology CDS 459732 460736 . - 0 ID=cds436;Parent=gene449;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NC_005810.1 RefSeq gene 460733 461572 . - . ID=gene450;Name=YP_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02255;old_locus_tag=YP0436%2CYP_0436 NC_005810.1 Protein Homology CDS 460733 461572 . - 0 ID=cds437;Parent=gene450;Dbxref=Genbank:WP_002209060.1;Name=WP_002209060.1;gbkey=CDS;product=hemin-binding periplasmic protein HmuT;protein_id=WP_002209060.1;transl_table=11 NC_005810.1 RefSeq gene 461569 462606 . - . ID=gene451;Name=YP_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02260;old_locus_tag=YP0437%2CYP_0437 NC_005810.1 Protein Homology CDS 461569 462606 . - 0 ID=cds438;Parent=gene451;Dbxref=Genbank:WP_002209061.1;Name=WP_002209061.1;gbkey=CDS;product=hemin transporter HmuS;protein_id=WP_002209061.1;transl_table=11 NC_005810.1 RefSeq gene 462725 464755 . - . ID=gene452;Name=YP_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02265;old_locus_tag=YP0438%2CYP_0438 NC_005810.1 Protein Homology CDS 462725 464755 . - 0 ID=cds439;Parent=gene452;Dbxref=Genbank:WP_002209062.1;Name=WP_002209062.1;gbkey=CDS;product=hemin receptor;protein_id=WP_002209062.1;transl_table=11 NC_005810.1 RefSeq gene 464885 465076 . - . ID=gene453;Name=YP_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22270;old_locus_tag=YP0439%2CYP_0439 NC_005810.1 Protein Homology CDS 464885 465076 . - 0 ID=cds440;Parent=gene453;Dbxref=Genbank:WP_002230445.1;Name=WP_002230445.1;gbkey=CDS;product=hemin transporter;protein_id=WP_002230445.1;transl_table=11 NC_005810.1 RefSeq gene 465162 465812 . - . ID=gene454;Name=YP_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02275;old_locus_tag=YP0440%2CYP_0440 NC_005810.1 Protein Homology CDS 465162 465812 . - 0 ID=cds441;Parent=gene454;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11 NC_005810.1 RefSeq gene 465846 466373 . - . ID=gene455;Name=YP_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02280;old_locus_tag=YP0441%2CYP_0441 NC_005810.1 Protein Homology CDS 465846 466373 . - 0 ID=cds442;Parent=gene455;Dbxref=Genbank:WP_002230449.1;Name=WP_002230449.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_002230449.1;transl_table=11 NC_005810.1 RefSeq gene 466406 467374 . - . ID=gene456;Name=YP_RS02285;end_range=467374,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS02285;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 466406 467374 . - 0 ID=cds443;Parent=gene456;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;end_range=467374,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=coproporphyrinogen III oxidase;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 467370 469327 . + . ID=id87;gbkey=repeat_region NC_005810.1 RefSeq region 467373 469325 . - . ID=id88;gbkey=mobile_element NC_005810.1 RefSeq gene 467438 468217 . - . ID=gene457;Name=YP_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02290;old_locus_tag=YP0443%2CYP_0443 NC_005810.1 Protein Homology CDS 467438 468217 . - 0 ID=cds444;Parent=gene457;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 468217 469239 . - . ID=gene458;Name=YP_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02295;old_locus_tag=YP0444%2CYP_0444 NC_005810.1 Protein Homology CDS 468217 469239 . - 0 ID=cds445;Parent=gene458;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 469253 469678 . - . ID=gene459;Name=YP_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02300 NC_005810.1 Protein Homology CDS 469253 469678 . - 0 ID=cds446;Parent=gene459;Dbxref=Genbank:WP_041175912.1;Name=WP_041175912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175912.1;transl_table=11 NC_005810.1 RefSeq gene 470019 470819 . - . ID=gene460;Name=YP_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02305;old_locus_tag=YP0445%2CYP_0445 NC_005810.1 Protein Homology CDS 470019 470819 . - 0 ID=cds447;Parent=gene460;Dbxref=Genbank:WP_002209067.1;Name=WP_002209067.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NC_005810.1 RefSeq gene 471134 471622 . - . ID=gene461;Name=YP_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02310;old_locus_tag=YP0446%2CYP_0446 NC_005810.1 Protein Homology CDS 471134 471622 . - 0 ID=cds448;Parent=gene461;Dbxref=Genbank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NC_005810.1 RefSeq gene 472019 472978 . - . ID=gene462;Name=YP_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02315;old_locus_tag=YP0447%2CYP_0447 NC_005810.1 Protein Homology CDS 472019 472978 . - 0 ID=cds449;Parent=gene462;Dbxref=Genbank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209069.1;transl_table=11 NC_005810.1 RefSeq gene 472978 474057 . - . ID=gene463;Name=YP_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02320;old_locus_tag=YP0448%2CYP_0448 NC_005810.1 Protein Homology CDS 472978 474057 . - 0 ID=cds450;Parent=gene463;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11 NC_005810.1 RefSeq gene 474050 474862 . - . ID=gene464;Name=YP_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02325;old_locus_tag=YP0449%2CYP_0449 NC_005810.1 Protein Homology CDS 474050 474862 . - 0 ID=cds451;Parent=gene464;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11 NC_005810.1 RefSeq gene 474855 475991 . - . ID=gene465;Name=YP_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02330;old_locus_tag=YP0450%2CYP_0450 NC_005810.1 Protein Homology CDS 474855 475991 . - 0 ID=cds452;Parent=gene465;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11 NC_005810.1 RefSeq gene 476003 477064 . - . ID=gene466;Name=YP_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02335;old_locus_tag=YP0451%2CYP_0451 NC_005810.1 Protein Homology CDS 476003 477064 . - 0 ID=cds453;Parent=gene466;Dbxref=Genbank:WP_002209073.1;Name=WP_002209073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209073.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 477192 477225 . + . ID=id89;Dbxref=CollecTF:EXPSITE_00024120;Note=Transcription factor binding site for NP_994426. Originally reported in Yersinia pestis biovar Microtus str. 201~Evidence of regulation for: YP_0456%2C YP_0454%2C YP_0455%2C YP_0452%2C YP_0453;gbkey=protein_bind NC_005810.1 RefSeq protein_binding_site 477294 477327 . + . ID=id90;Dbxref=CollecTF:EXPSITE_00024130;Note=Transcription factor binding site for NP_994426. Originally reported in Yersinia pestis biovar Microtus str. 201~Evidence of regulation for: YP_0451;gbkey=protein_bind NC_005810.1 RefSeq gene 477340 477933 . + . ID=gene467;Name=YP_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02340;old_locus_tag=YP0452%2CYP_0452 NC_005810.1 Protein Homology CDS 477340 477933 . + 0 ID=cds454;Parent=gene467;Dbxref=Genbank:WP_002228131.1;Name=WP_002228131.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_002228131.1;transl_table=11 NC_005810.1 RefSeq gene 477933 479117 . + . ID=gene468;Name=YP_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02345;old_locus_tag=YP0453%2CYP_0453 NC_005810.1 Protein Homology CDS 477933 479117 . + 0 ID=cds455;Parent=gene468;Dbxref=Genbank:WP_002209075.1;Name=WP_002209075.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209075.1;transl_table=11 NC_005810.1 RefSeq gene 479150 479605 . + . ID=gene469;Name=YP_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02350;old_locus_tag=YP0454%2CYP_0454 NC_005810.1 Protein Homology CDS 479150 479605 . + 0 ID=cds456;Parent=gene469;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11 NC_005810.1 RefSeq gene 479627 480664 . + . ID=gene470;Name=YP_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02355;old_locus_tag=YP0455%2CYP_0455 NC_005810.1 Protein Homology CDS 479627 480664 . + 0 ID=cds457;Parent=gene470;Dbxref=Genbank:WP_002209077.1;Name=WP_002209077.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_002209077.1;transl_table=11 NC_005810.1 RefSeq gene 480728 481306 . + . ID=gene471;Name=YP_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02360;old_locus_tag=YP0456%2CYP_0456 NC_005810.1 Protein Homology CDS 480728 481306 . + 0 ID=cds458;Parent=gene471;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11 NC_005810.1 RefSeq gene 481490 482065 . + . ID=gene472;Name=YP_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02365;old_locus_tag=YP0457%2CYP_0457 NC_005810.1 Protein Homology CDS 481490 482065 . + 0 ID=cds459;Parent=gene472;Dbxref=Genbank:WP_002209079.1;Name=WP_002209079.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_002209079.1;transl_table=11 NC_005810.1 RefSeq gene 482778 483416 . + . ID=gene473;Name=YP_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02370;old_locus_tag=YP0458%2CYP_0458 NC_005810.1 Protein Homology CDS 482778 483416 . + 0 ID=cds460;Parent=gene473;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11 NC_005810.1 RefSeq gene 483667 486045 . + . ID=gene474;Name=YP_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02375;old_locus_tag=YP0459%2CYP_0459 NC_005810.1 Protein Homology CDS 483667 486045 . + 0 ID=cds461;Parent=gene474;Dbxref=Genbank:WP_002230452.1;Name=WP_002230452.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230452.1;transl_table=11 NC_005810.1 RefSeq gene 486117 486860 . + . ID=gene475;Name=YP_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02380;old_locus_tag=YP0460%2CYP_0460 NC_005810.1 Protein Homology CDS 486117 486860 . + 0 ID=cds462;Parent=gene475;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11 NC_005810.1 RefSeq gene 486871 487125 . + . ID=gene476;Name=YP_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02385;old_locus_tag=YP0461%2CYP_0461 NC_005810.1 Protein Homology CDS 486871 487125 . + 0 ID=cds463;Parent=gene476;Dbxref=Genbank:WP_002214631.1;Name=WP_002214631.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214631.1;transl_table=11 NC_005810.1 RefSeq gene 488318 489637 . + . ID=gene477;Name=YP_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02390;old_locus_tag=YP0462%2CYP_0462 NC_005810.1 Protein Homology CDS 488318 489637 . + 0 ID=cds464;Parent=gene477;Dbxref=Genbank:WP_002214633.1;Name=WP_002214633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214633.1;transl_table=11 NC_005810.1 RefSeq gene 490154 490357 . + . ID=gene478;Name=YP_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02395 NC_005810.1 Protein Homology CDS 490154 490357 . + 0 ID=cds465;Parent=gene478;Dbxref=Genbank:WP_002228683.1;Name=WP_002228683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228683.1;transl_table=11 NC_005810.1 RefSeq gene 490646 492703 . + . ID=gene479;Name=YP_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02400;old_locus_tag=YP0464%2CYP_0464 NC_005810.1 Protein Homology CDS 490646 492703 . + 0 ID=cds466;Parent=gene479;Dbxref=Genbank:WP_002209085.1;Name=WP_002209085.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002209085.1;transl_table=11 NC_005810.1 RefSeq repeat_region 492726 492900 . + . ID=id91;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 493039 495177 . + . ID=id92;gbkey=repeat_region NC_005810.1 RefSeq gene 493047 496856 . - . ID=gene480;Name=YP_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02405;old_locus_tag=YP0465%2CYP_0465 NC_005810.1 Protein Homology CDS 493047 496856 . - 0 ID=cds467;Parent=gene480;Dbxref=Genbank:WP_002221634.1;Name=WP_002221634.1;gbkey=CDS;product=autotransporter;protein_id=WP_002221634.1;transl_table=11 NC_005810.1 RefSeq repeat_region 495208 495225 . + . ID=id93;gbkey=repeat_region NC_005810.1 RefSeq gene 497688 498212 . + . ID=gene481;Name=YP_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02410;old_locus_tag=YP0466%2CYP_0466 NC_005810.1 Protein Homology CDS 497688 498212 . + 0 ID=cds468;Parent=gene481;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11 NC_005810.1 RefSeq gene 498378 499244 . + . ID=gene482;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YP_RS02415;old_locus_tag=YP0467%2CYP_0467 NC_005810.1 Protein Homology CDS 498378 499244 . + 0 ID=cds469;Parent=gene482;Dbxref=Genbank:WP_002209088.1;Name=WP_002209088.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_002209088.1;transl_table=11 NC_005810.1 RefSeq gene 499425 501902 . - . ID=gene483;Name=YP_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02420;old_locus_tag=YP0468%2CYP_0468 NC_005810.1 Protein Homology CDS 499425 501902 . - 0 ID=cds470;Parent=gene483;Dbxref=Genbank:WP_002214644.1;Name=WP_002214644.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002214644.1;transl_table=11 NC_005810.1 RefSeq gene 502030 502401 . + . ID=gene484;Name=YP_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02425;old_locus_tag=YP0469%2CYP_0469 NC_005810.1 Protein Homology CDS 502030 502401 . + 0 ID=cds471;Parent=gene484;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NC_005810.1 RefSeq gene 502526 503134 . + . ID=gene485;Name=YP_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02430;old_locus_tag=YP0470%2CYP_0470 NC_005810.1 Protein Homology CDS 502526 503134 . + 0 ID=cds472;Parent=gene485;Dbxref=Genbank:WP_002209090.1;Name=WP_002209090.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_002209090.1;transl_table=11 NC_005810.1 RefSeq repeat_region 503208 503256 . + . ID=id94;gbkey=repeat_region NC_005810.1 RefSeq gene 503308 503817 . - . ID=gene486;Name=YP_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02435;old_locus_tag=YP0471%2CYP_0471 NC_005810.1 Protein Homology CDS 503308 503817 . - 0 ID=cds473;Parent=gene486;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11 NC_005810.1 RefSeq gene 504072 505109 . + . ID=gene487;Name=YP_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02440;old_locus_tag=YP0472%2CYP_0472 NC_005810.1 Protein Homology CDS 504072 505109 . + 0 ID=cds474;Parent=gene487;Dbxref=Genbank:WP_002209092.1;Name=WP_002209092.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_002209092.1;transl_table=11 NC_005810.1 RefSeq gene 505625 505843 . + . ID=gene488;Name=YP_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02445;old_locus_tag=YP0473%2CYP_0473 NC_005810.1 Protein Homology CDS 505625 505843 . + 0 ID=cds475;Parent=gene488;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11 NC_005810.1 RefSeq gene 506188 507171 . - . ID=gene489;Name=YP_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02450;old_locus_tag=YP0474%2CYP_0474 NC_005810.1 Protein Homology CDS 506188 507171 . - 0 ID=cds476;Parent=gene489;Dbxref=Genbank:WP_002209094.1;Name=WP_002209094.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002209094.1;transl_table=11 NC_005810.1 RefSeq gene 507503 508909 . + . ID=gene490;Name=YP_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02455;old_locus_tag=YP0475%2CYP_0475 NC_005810.1 Protein Homology CDS 507503 508909 . + 0 ID=cds477;Parent=gene490;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NC_005810.1 RefSeq gene 509006 510085 . + . ID=gene491;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YP_RS02460;old_locus_tag=YP0476%2CYP_0476 NC_005810.1 Protein Homology CDS 509006 510085 . + 0 ID=cds478;Parent=gene491;Dbxref=Genbank:WP_002209096.1;Name=WP_002209096.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_002209096.1;transl_table=11 NC_005810.1 RefSeq gene 510271 511464 . + . ID=gene492;Name=YP_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02465;old_locus_tag=YP0477%2CYP_0477 NC_005810.1 Protein Homology CDS 510271 511464 . + 0 ID=cds479;Parent=gene492;Dbxref=Genbank:WP_002209097.1;Name=WP_002209097.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002209097.1;transl_table=11 NC_005810.1 RefSeq gene 511991 512350 . + . ID=gene493;Name=YP_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02470;old_locus_tag=YP0478%2CYP_0478 NC_005810.1 Protein Homology CDS 511991 512350 . + 0 ID=cds480;Parent=gene493;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11 NC_005810.1 RefSeq gene 512443 515286 . - . ID=gene494;Name=YP_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02475;old_locus_tag=YP0479%2CYP_0479 NC_005810.1 Protein Homology CDS 512443 515286 . - 0 ID=cds481;Parent=gene494;Dbxref=Genbank:WP_002209099.1;Name=WP_002209099.1;gbkey=CDS;product=UvrABC system protein A;protein_id=WP_002209099.1;transl_table=11 NC_005810.1 RefSeq gene 515744 516292 . + . ID=gene495;Name=YP_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02480;old_locus_tag=YP0480%2CYP_0480 NC_005810.1 Protein Homology CDS 515744 516292 . + 0 ID=cds482;Parent=gene495;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11 NC_005810.1 RefSeq repeat_region 516296 516367 . + . ID=id95;Note=degenerate repeat region containing 4 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 516539 516853 . - . ID=gene496;Name=YP_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02485;old_locus_tag=YP0481%2CYP_0481 NC_005810.1 Protein Homology CDS 516539 516853 . - 0 ID=cds483;Parent=gene496;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NC_005810.1 RefSeq gene 516867 518015 . - . ID=gene497;Name=YP_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02490;old_locus_tag=YP0482%2CYP_0482 NC_005810.1 Protein Homology CDS 516867 518015 . - 0 ID=cds484;Parent=gene497;Dbxref=Genbank:WP_002209102.1;Name=WP_002209102.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002209102.1;transl_table=11 NC_005810.1 RefSeq gene 518082 518906 . - . ID=gene498;Name=YP_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02495;old_locus_tag=YP0483%2CYP_0483 NC_005810.1 Protein Homology CDS 518082 518906 . - 0 ID=cds485;Parent=gene498;Dbxref=Genbank:WP_002209103.1;Name=WP_002209103.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_002209103.1;transl_table=11 NC_005810.1 RefSeq gene 518919 520175 . - . ID=gene499;Name=YP_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02500;old_locus_tag=YP0484%2CYP_0484 NC_005810.1 Protein Homology CDS 518919 520175 . - 0 ID=cds486;Parent=gene499;Dbxref=Genbank:WP_002209104.1;Name=WP_002209104.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_002209104.1;transl_table=11 NC_005810.1 RefSeq gene 520172 521629 . - . ID=gene500;Name=YP_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02505;old_locus_tag=YP0485%2CYP_0485 NC_005810.1 Protein Homology CDS 520172 521629 . - 0 ID=cds487;Parent=gene500;Dbxref=Genbank:WP_002209105.1;Name=WP_002209105.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_002209105.1;transl_table=11 NC_005810.1 RefSeq gene 521628 521834 . + . ID=gene501;Name=YP_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02510;old_locus_tag=YP0486%2CYP_0486 NC_005810.1 Protein Homology CDS 521628 521834 . + 0 ID=cds488;Parent=gene501;Dbxref=Genbank:WP_002209106.1;Name=WP_002209106.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_002209106.1;transl_table=11 NC_005810.1 RefSeq repeat_region 521665 521694 . + . ID=id96;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 521831 521974 . + . ID=gene502;Name=YP_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02515 NC_005810.1 Protein Homology CDS 521831 521974 . + 0 ID=cds489;Parent=gene502;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11 NC_005810.1 RefSeq gene 522056 522877 . + . ID=gene503;Name=YP_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02520;old_locus_tag=YP0487%2CYP_0487 NC_005810.1 Protein Homology CDS 522056 522877 . + 0 ID=cds490;Parent=gene503;Dbxref=Genbank:WP_002230460.1;Name=WP_002230460.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_002230460.1;transl_table=11 NC_005810.1 RefSeq repeat_region 522907 522950 . + . ID=id97;Note=degenerate repeat region containing 2 copies of a 22bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 523010 523882 . + . ID=gene504;Name=YP_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02525;old_locus_tag=YP0488%2CYP_0488 NC_005810.1 Protein Homology CDS 523010 523882 . + 0 ID=cds491;Parent=gene504;Dbxref=Genbank:WP_002209110.1;Name=WP_002209110.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_002209110.1;transl_table=11 NC_005810.1 RefSeq repeat_region 523980 524039 . + . ID=id98;Note=degenerate repeat region containing 3 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 524051 525085 . - . ID=gene505;Name=YP_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02530;old_locus_tag=YP0489%2CYP_0489 NC_005810.1 Protein Homology CDS 524051 525085 . - 0 ID=cds492;Parent=gene505;Dbxref=Genbank:WP_002209111.1;Name=WP_002209111.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_002209111.1;transl_table=11 NC_005810.1 RefSeq gene 525239 525505 . + . ID=gene506;Name=YP_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02535;old_locus_tag=YP0490%2CYP_0490 NC_005810.1 Protein Homology CDS 525239 525505 . + 0 ID=cds493;Parent=gene506;Dbxref=Genbank:WP_002217947.1;Name=WP_002217947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217947.1;transl_table=11 NC_005810.1 RefSeq repeat_region 525346 525393 . + . ID=id99;Note=exact repeat region containing 2 copies of a 24 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 525941 526366 . - . ID=gene507;Name=YP_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02540;old_locus_tag=YP0491%2CYP_0491 NC_005810.1 Protein Homology CDS 525941 526366 . - 0 ID=cds494;Parent=gene507;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11 NC_005810.1 RefSeq gene 526596 526763 . + . ID=gene508;Name=YP_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02545;old_locus_tag=YP0492%2CYP_0492 NC_005810.1 Protein Homology CDS 526596 526763 . + 0 ID=cds495;Parent=gene508;Dbxref=Genbank:WP_002209114.1;Name=WP_002209114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209114.1;transl_table=11 NC_005810.1 RefSeq gene 526793 529348 . + . ID=gene509;Name=YP_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02550;old_locus_tag=YP0493%2CYP_0493 NC_005810.1 Protein Homology CDS 526793 529348 . + 0 ID=cds496;Parent=gene509;Dbxref=Genbank:WP_002209115.1;Name=WP_002209115.1;gbkey=CDS;product=viral enhancin protein;protein_id=WP_002209115.1;transl_table=11 NC_005810.1 RefSeq repeat_region 529777 529880 . + . ID=id100;gbkey=repeat_region NC_005810.1 RefSeq gene 529782 529857 . - . ID=gene510;Name=YP_RS02555;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS02555;old_locus_tag=tRNA-Phe_1%2CYP_t7 NC_005810.1 tRNAscan-SE tRNA 529782 529857 . - . ID=rna12;Parent=gene510;anticodon=(pos:complement(529822..529824));gbkey=tRNA;product=tRNA-Phe NC_005810.1 tRNAscan-SE exon 529782 529857 . - . ID=id101;Parent=rna12;anticodon=(pos:complement(529822..529824));gbkey=tRNA;product=tRNA-Phe NC_005810.1 RefSeq gene 530002 530577 . - . ID=gene511;Name=YP_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02560;old_locus_tag=YP0494%2CYP_0494 NC_005810.1 Protein Homology CDS 530002 530577 . - 0 ID=cds497;Parent=gene511;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NC_005810.1 RefSeq gene 530997 533012 . + . ID=gene512;Name=YP_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02565;old_locus_tag=YP0496%2CYP_0496 NC_005810.1 Protein Homology CDS 530997 533012 . + 0 ID=cds498;Parent=gene512;Dbxref=Genbank:WP_002209118.1;Name=WP_002209118.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S-binding subunit;protein_id=WP_002209118.1;transl_table=11 NC_005810.1 RefSeq gene 533035 533592 . + . ID=gene513;Name=YP_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02570;old_locus_tag=YP0497%2CYP_0497 NC_005810.1 Protein Homology CDS 533035 533592 . + 0 ID=cds499;Parent=gene513;Dbxref=Genbank:WP_002209119.1;Name=WP_002209119.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209119.1;transl_table=11 NC_005810.1 RefSeq gene 533615 535762 . + . ID=gene514;Name=YP_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02575;old_locus_tag=YP0498%2CYP_0498 NC_005810.1 Protein Homology CDS 533615 535762 . + 0 ID=cds500;Parent=gene514;Dbxref=Genbank:WP_002209120.1;Name=WP_002209120.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_002209120.1;transl_table=11 NC_005810.1 RefSeq gene 535824 537611 . - . ID=gene515;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=YP_RS02580;old_locus_tag=YP0499%2CYP_0499 NC_005810.1 Protein Homology CDS 535824 537611 . - 0 ID=cds501;Parent=gene515;Dbxref=Genbank:WP_002230462.1;Name=WP_002230462.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein;protein_id=WP_002230462.1;transl_table=11 NC_005810.1 RefSeq gene 537587 537910 . - . ID=gene516;Name=YP_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02585;old_locus_tag=YP0500%2CYP_0500 NC_005810.1 Protein Homology CDS 537587 537910 . - 0 ID=cds502;Parent=gene516;Dbxref=Genbank:WP_002353622.1;Name=WP_002353622.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent ion tolerance protein CutA;protein_id=WP_002353622.1;transl_table=11 NC_005810.1 RefSeq gene 538131 539432 . - . ID=gene517;Name=YP_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02590;old_locus_tag=YP0501%2CYP_0501 NC_005810.1 Protein Homology CDS 538131 539432 . - 0 ID=cds503;Parent=gene517;Dbxref=Genbank:WP_002230463.1;Name=WP_002230463.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002230463.1;transl_table=11 NC_005810.1 RefSeq gene 539552 540988 . - . ID=gene518;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YP_RS02595;old_locus_tag=YP0502%2CYP_0502 NC_005810.1 Protein Homology CDS 539552 540988 . - 0 ID=cds504;Parent=gene518;Dbxref=Genbank:WP_002230464.1;Name=WP_002230464.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_002230464.1;transl_table=11 NC_005810.1 RefSeq gene 541436 542014 . + . ID=gene519;Name=YP_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02600;old_locus_tag=YP0504%2CYP_0504 NC_005810.1 Protein Homology CDS 541436 542014 . + 0 ID=cds505;Parent=gene519;Dbxref=Genbank:WP_002209126.1;Name=WP_002209126.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_002209126.1;transl_table=11 NC_005810.1 RefSeq gene 542269 542562 . + . ID=gene520;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=YP_RS02605;old_locus_tag=YP0505%2CYP_0505 NC_005810.1 Protein Homology CDS 542269 542562 . + 0 ID=cds506;Parent=gene520;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NC_005810.1 RefSeq gene 542609 544255 . + . ID=gene521;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=YP_RS02610;old_locus_tag=YP0506%2CYP_0506 NC_005810.1 Protein Homology CDS 542609 544255 . + 0 ID=cds507;Parent=gene521;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11 NC_005810.1 RefSeq gene 544879 545277 . + . ID=gene522;Name=YP_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02615;old_locus_tag=YP0508%2CYP_0508 NC_005810.1 Protein Homology CDS 544879 545277 . + 0 ID=cds508;Parent=gene522;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11 NC_005810.1 RefSeq gene 545562 546590 . - . ID=gene523;Name=YP_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02620;old_locus_tag=YP0509%2CYP_0509 NC_005810.1 Protein Homology CDS 545562 546590 . - 0 ID=cds509;Parent=gene523;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NC_005810.1 RefSeq gene 546626 547192 . + . ID=gene524;Name=YP_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02625;old_locus_tag=YP0510%2CYP_0510 NC_005810.1 Protein Homology CDS 546626 547192 . + 0 ID=cds510;Parent=gene524;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NC_005810.1 RefSeq gene 547439 547753 . + . ID=gene525;Name=YP_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02630;old_locus_tag=YP0511 NC_005810.1 Protein Homology CDS 547439 547753 . + 0 ID=cds511;Parent=gene525;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11 NC_005810.1 RefSeq gene 547918 548274 . - . ID=gene526;Name=YP_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02635;old_locus_tag=YP0512%2CYP_0512 NC_005810.1 Protein Homology CDS 547918 548274 . - 0 ID=cds512;Parent=gene526;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11 NC_005810.1 RefSeq gene 548291 548683 . - . ID=gene527;Name=YP_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02640;old_locus_tag=YP0513%2CYP_0513 NC_005810.1 Protein Homology CDS 548291 548683 . - 0 ID=cds513;Parent=gene527;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11 NC_005810.1 RefSeq gene 548700 549434 . - . ID=gene528;Name=YP_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02645;old_locus_tag=YP0514%2CYP_0514 NC_005810.1 Protein Homology CDS 548700 549434 . - 0 ID=cds514;Parent=gene528;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NC_005810.1 RefSeq gene 549427 551250 . - . ID=gene529;Name=YP_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02650;old_locus_tag=YP0515%2CYP_0515 NC_005810.1 Protein Homology CDS 549427 551250 . - 0 ID=cds515;Parent=gene529;Dbxref=Genbank:WP_002209137.1;Name=WP_002209137.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11 NC_005810.1 RefSeq gene 551357 551548 . + . ID=gene530;Name=YP_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02655;old_locus_tag=YP0516%2CYP_0516 NC_005810.1 Protein Homology CDS 551357 551548 . + 0 ID=cds516;Parent=gene530;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11 NC_005810.1 RefSeq gene 551708 552685 . + . ID=gene531;Name=YP_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02660;old_locus_tag=YP0517%2CYP_0517 NC_005810.1 Protein Homology CDS 551708 552685 . + 0 ID=cds517;Parent=gene531;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NC_005810.1 RefSeq gene 552806 556147 . - . ID=gene532;Name=YP_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02665;old_locus_tag=YP0518%2CYP_0518 NC_005810.1 Protein Homology CDS 552806 556147 . - 0 ID=cds518;Parent=gene532;Dbxref=Genbank:WP_016603860.1;Name=WP_016603860.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_016603860.1;transl_table=11 NC_005810.1 RefSeq gene 556189 557070 . - . ID=gene533;Name=YP_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02670;old_locus_tag=YP0519%2CYP_0519 NC_005810.1 Protein Homology CDS 556189 557070 . - 0 ID=cds519;Parent=gene533;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11 NC_005810.1 RefSeq gene 557395 558447 . - . ID=gene534;Name=YP_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02675;old_locus_tag=YP0520%2CYP_0520 NC_005810.1 Protein Homology CDS 557395 558447 . - 0 ID=cds520;Parent=gene534;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NC_005810.1 RefSeq gene 558454 558648 . - . ID=gene535;Name=YP_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02680 NC_005810.1 Protein Homology CDS 558454 558648 . - 0 ID=cds521;Parent=gene535;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11 NC_005810.1 RefSeq gene 558647 559192 . + . ID=gene536;Name=YP_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02685;old_locus_tag=YP0521%2CYP_0521 NC_005810.1 Protein Homology CDS 558647 559192 . + 0 ID=cds522;Parent=gene536;Dbxref=Genbank:WP_002209143.1;Name=WP_002209143.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_002209143.1;transl_table=11 NC_005810.1 RefSeq repeat_region 559204 559546 . + . ID=id102;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 559204 559447 . + . ID=id103;Note=degenerate repeat region containing 2 copies of a 122bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 559750 559825 . + . ID=gene537;Name=YP_RS02695;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS02695;old_locus_tag=tRNA-Gly_1%2CYP_t8 NC_005810.1 tRNAscan-SE tRNA 559750 559825 . + . ID=rna13;Parent=gene537;anticodon=(pos:559783..559785);gbkey=tRNA;product=tRNA-Gly NC_005810.1 tRNAscan-SE exon 559750 559825 . + . ID=id104;Parent=rna13;anticodon=(pos:559783..559785);gbkey=tRNA;product=tRNA-Gly NC_005810.1 RefSeq gene 560137 561372 . - . ID=gene538;Name=YP_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02700;old_locus_tag=YP0523%2CYP_0523 NC_005810.1 Protein Homology CDS 560137 561372 . - 0 ID=cds523;Parent=gene538;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11 NC_005810.1 RefSeq gene 561371 562885 . + . ID=gene539;Name=YP_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02705;old_locus_tag=YP0524%2CYP_0524 NC_005810.1 Protein Homology CDS 561371 562885 . + 0 ID=cds524;Parent=gene539;Dbxref=Genbank:WP_002209145.1;Name=WP_002209145.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002209145.1;transl_table=11 NC_005810.1 RefSeq gene 562896 563366 . + . ID=gene540;Name=YP_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02710;old_locus_tag=YP0525%2CYP_0525 NC_005810.1 Protein Homology CDS 562896 563366 . + 0 ID=cds525;Parent=gene540;Dbxref=Genbank:WP_002209146.1;Name=WP_002209146.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_002209146.1;transl_table=11 NC_005810.1 RefSeq gene 563374 565287 . + . ID=gene541;Name=YP_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02715;old_locus_tag=YP0526%2CYP_0526 NC_005810.1 Protein Homology CDS 563374 565287 . + 0 ID=cds526;Parent=gene541;Dbxref=Genbank:WP_002232017.1;Name=WP_002232017.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002232017.1;transl_table=11 NC_005810.1 RefSeq repeat_region 563415 563450 . + . ID=id105;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 565303 567210 . + . ID=gene542;Name=YP_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02720;old_locus_tag=YP0527%2CYP_0527 NC_005810.1 Protein Homology CDS 565303 567210 . + 0 ID=cds527;Parent=gene542;Dbxref=Genbank:WP_002209148.1;Name=WP_002209148.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_002209148.1;transl_table=11 NC_005810.1 RefSeq gene 567203 568144 . + . ID=gene543;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YP_RS02725;old_locus_tag=YP0528%2CYP_0528 NC_005810.1 Protein Homology CDS 567203 568144 . + 0 ID=cds528;Parent=gene543;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11 NC_005810.1 RefSeq gene 568260 568565 . + . ID=gene544;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YP_RS02730;old_locus_tag=YP0529%2CYP_0529 NC_005810.1 Protein Homology CDS 568260 568565 . + 0 ID=cds529;Parent=gene544;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NC_005810.1 RefSeq gene 568664 569950 . + . ID=gene545;Name=YP_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02735;old_locus_tag=YP0530%2CYP_0530 NC_005810.1 Protein Homology CDS 568664 569950 . + 0 ID=cds530;Parent=gene545;Dbxref=Genbank:WP_002209152.1;Name=WP_002209152.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_002209152.1;transl_table=11 NC_005810.1 RefSeq gene 570191 571450 . + . ID=gene546;Name=YP_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02740;old_locus_tag=YP0531%2CYP_0531 NC_005810.1 Protein Homology CDS 570191 571450 . + 0 ID=cds531;Parent=gene546;Dbxref=Genbank:WP_002209154.1;Name=WP_002209154.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209154.1;transl_table=11 NC_005810.1 RefSeq gene 571454 572458 . + . ID=gene547;Name=YP_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02745;old_locus_tag=YP0532%2CYP_0532 NC_005810.1 Protein Homology CDS 571454 572458 . + 0 ID=cds532;Parent=gene547;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11 NC_005810.1 RefSeq gene 572630 572830 . + . ID=gene548;Name=YP_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02750;old_locus_tag=YP0533 NC_005810.1 Protein Homology CDS 572630 572830 . + 0 ID=cds533;Parent=gene548;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11 NC_005810.1 RefSeq gene 572930 574228 . + . ID=gene549;Name=YP_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02755;old_locus_tag=YP0534%2CYP_0534 NC_005810.1 Protein Homology CDS 572930 574228 . + 0 ID=cds534;Parent=gene549;Dbxref=Genbank:WP_002209157.1;Name=WP_002209157.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_002209157.1;transl_table=11 NC_005810.1 RefSeq repeat_region 574356 574395 . + . ID=id106;Note=exact repeat region containing 2 copies of a 20 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 574597 575022 . + . ID=gene550;Name=YP_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02760;old_locus_tag=YP0535%2CYP_0535 NC_005810.1 Protein Homology CDS 574597 575022 . + 0 ID=cds535;Parent=gene550;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11 NC_005810.1 RefSeq gene 575263 577797 . + . ID=gene551;Name=YP_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02765;old_locus_tag=YP0536%2CYP_0536 NC_005810.1 Protein Homology CDS 575263 577797 . + 0 ID=cds536;Parent=gene551;Dbxref=Genbank:WP_002209159.1;Name=WP_002209159.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_002209159.1;transl_table=11 NC_005810.1 RefSeq gene 577916 578656 . + . ID=gene552;Name=YP_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02770;old_locus_tag=YP0537%2CYP_0537 NC_005810.1 Protein Homology CDS 577916 578656 . + 0 ID=cds537;Parent=gene552;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NC_005810.1 RefSeq repeat_region 578732 578906 . + . ID=id107;gbkey=repeat_region NC_005810.1 RefSeq gene 579076 580707 . + . ID=gene553;Name=YP_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02775;old_locus_tag=YP0538%2CYP_0538 NC_005810.1 Protein Homology CDS 579076 580707 . + 0 ID=cds538;Parent=gene553;Dbxref=Genbank:WP_032484797.1;Name=WP_032484797.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl-CoA dehydrogenase;protein_id=WP_032484797.1;transl_table=11 NC_005810.1 RefSeq gene 580779 581090 . - . ID=gene554;Name=YP_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02780;old_locus_tag=YP0539%2CYP_0539 NC_005810.1 Protein Homology CDS 580779 581090 . - 0 ID=cds539;Parent=gene554;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11 NC_005810.1 RefSeq gene 581281 582030 . + . ID=gene555;Name=YP_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02785;old_locus_tag=YP0540%2CYP_0540 NC_005810.1 Protein Homology CDS 581281 582030 . + 0 ID=cds540;Parent=gene555;Dbxref=Genbank:WP_002230471.1;Name=WP_002230471.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230471.1;transl_table=11 NC_005810.1 RefSeq gene 582105 582383 . + . ID=gene556;Name=YP_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02790;old_locus_tag=YP0541%2CYP_0541 NC_005810.1 Protein Homology CDS 582105 582383 . + 0 ID=cds541;Parent=gene556;Dbxref=Genbank:WP_002228199.1;Name=WP_002228199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228199.1;transl_table=11 NC_005810.1 RefSeq gene 582397 582789 . + . ID=gene557;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YP_RS02795;old_locus_tag=YP0542%2CYP_0542 NC_005810.1 Protein Homology CDS 582397 582789 . + 0 ID=cds542;Parent=gene557;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NC_005810.1 RefSeq gene 582798 583115 . + . ID=gene558;Name=YP_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02800;old_locus_tag=YP0543%2CYP_0543 NC_005810.1 Protein Homology CDS 582798 583115 . + 0 ID=cds543;Parent=gene558;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11 NC_005810.1 RefSeq gene 583120 583347 . + . ID=gene559;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YP_RS02805;old_locus_tag=YP0544%2CYP_0544 NC_005810.1 Protein Homology CDS 583120 583347 . + 0 ID=cds544;Parent=gene559;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NC_005810.1 RefSeq gene 583387 583839 . + . ID=gene560;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YP_RS02810;old_locus_tag=YP0545%2CYP_0545 NC_005810.1 Protein Homology CDS 583387 583839 . + 0 ID=cds545;Parent=gene560;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NC_005810.1 RefSeq gene 583875 584045 . + . ID=gene561;Name=YP_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02815 NC_005810.1 Protein Homology CDS 583875 584045 . + 0 ID=cds546;Parent=gene561;Dbxref=Genbank:WP_025470773.1;Name=WP_025470773.1;gbkey=CDS;product=transposase;protein_id=WP_025470773.1;transl_table=11 NC_005810.1 RefSeq repeat_region 583889 586565 . + . ID=id108;gbkey=repeat_region NC_005810.1 RefSeq region 583890 584056 . + . ID=id109;Note=disrupted by IS100;gbkey=mobile_element;part=1/2 NC_005810.1 RefSeq region 586011 586560 . + . ID=id109;Note=disrupted by IS100;gbkey=mobile_element;part=2/2 NC_005810.1 RefSeq region 584057 586009 . + . ID=id110;gbkey=mobile_element NC_005810.1 RefSeq gene 584143 585165 . + . ID=gene562;Name=YP_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02820;old_locus_tag=YP0546%2CYP_0546 NC_005810.1 Protein Homology CDS 584143 585165 . + 0 ID=cds547;Parent=gene562;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 585165 585944 . + . ID=gene563;Name=YP_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02825;old_locus_tag=YP0547%2CYP_0547 NC_005810.1 Protein Homology CDS 585165 585944 . + 0 ID=cds548;Parent=gene563;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 586045 586452 . + . ID=gene564;Name=YP_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02830;old_locus_tag=YP0548%2CYP_0548 NC_005810.1 Protein Homology CDS 586045 586452 . + 0 ID=cds549;Parent=gene564;Dbxref=Genbank:WP_029562500.1;Name=WP_029562500.1;gbkey=CDS;product=transposase;protein_id=WP_029562500.1;transl_table=11 NC_005810.1 RefSeq gene 586574 587029 . - . ID=gene565;Name=YP_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02835;old_locus_tag=YP0549%2CYP_0549 NC_005810.1 Protein Homology CDS 586574 587029 . - 0 ID=cds550;Parent=gene565;Dbxref=Genbank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210157.1;transl_table=11 NC_005810.1 RefSeq gene 587169 587909 . - . ID=gene566;Name=YP_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02840;old_locus_tag=YP0550%2CYP_0550 NC_005810.1 Protein Homology CDS 587169 587909 . - 0 ID=cds551;Parent=gene566;Dbxref=Genbank:WP_002210158.1;Name=WP_002210158.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_002210158.1;transl_table=11 NC_005810.1 RefSeq repeat_region 587993 588022 . + . ID=id111;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 588252 588872 . + . ID=gene567;Name=YP_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02845;old_locus_tag=YP0551%2CYP_0551 NC_005810.1 Protein Homology CDS 588252 588872 . + 0 ID=cds552;Parent=gene567;Dbxref=Genbank:WP_002228198.1;Name=WP_002228198.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228198.1;transl_table=11 NC_005810.1 RefSeq gene 588970 589635 . - . ID=gene568;Name=YP_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02850;old_locus_tag=YP0552%2CYP_0552 NC_005810.1 Protein Homology CDS 588970 589635 . - 0 ID=cds553;Parent=gene568;Dbxref=Genbank:WP_002210159.1;Name=WP_002210159.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_002210159.1;transl_table=11 NC_005810.1 RefSeq gene 589790 591760 . - . ID=gene569;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=YP_RS02855;old_locus_tag=YP0553%2CYP_0553 NC_005810.1 Protein Homology CDS 589790 591760 . - 0 ID=cds554;Parent=gene569;Dbxref=Genbank:WP_002210160.1;Name=WP_002210160.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=3'-nucleotidase;protein_id=WP_002210160.1;transl_table=11 NC_005810.1 RefSeq gene 592195 592935 . + . ID=gene570;Name=YP_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02860;old_locus_tag=YP0554%2CYP_0554 NC_005810.1 Protein Homology CDS 592195 592935 . + 0 ID=cds555;Parent=gene570;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11 NC_005810.1 RefSeq gene 592938 593501 . - . ID=gene571;Name=YP_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02865;old_locus_tag=YP0555%2CYP_0555 NC_005810.1 Protein Homology CDS 592938 593501 . - 0 ID=cds556;Parent=gene571;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11 NC_005810.1 RefSeq gene 593836 594048 . + . ID=gene572;Name=YP_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02870;old_locus_tag=YP0556%2CYP_0556 NC_005810.1 Protein Homology CDS 593836 594048 . + 0 ID=cds557;Parent=gene572;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11 NC_005810.1 RefSeq gene 594156 595487 . - . ID=gene573;Name=YP_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02875;old_locus_tag=YP0557%2CYP_0557 NC_005810.1 Protein Homology CDS 594156 595487 . - 0 ID=cds558;Parent=gene573;Dbxref=Genbank:WP_002210164.1;Name=WP_002210164.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210164.1;transl_table=11 NC_005810.1 RefSeq gene 595765 596403 . - . ID=gene574;Name=YP_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02880;old_locus_tag=YP0558%2CYP_0558 NC_005810.1 Protein Homology CDS 595765 596403 . - 0 ID=cds559;Parent=gene574;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NC_005810.1 RefSeq gene 596678 598414 . + . ID=gene575;Name=YP_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02885;old_locus_tag=YP0559%2CYP_0559 NC_005810.1 Protein Homology CDS 596678 598414 . + 0 ID=cds560;Parent=gene575;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11 NC_005810.1 RefSeq gene 598411 602328 . + . ID=gene576;Name=YP_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02890;old_locus_tag=YP0560%2CYP_0560 NC_005810.1 Protein Homology CDS 598411 602328 . + 0 ID=cds561;Parent=gene576;Dbxref=Genbank:WP_002210167.1;Name=WP_002210167.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210167.1;transl_table=11 NC_005810.1 RefSeq gene 602331 602687 . + . ID=gene577;Name=YP_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02895;old_locus_tag=YP0561%2CYP_0561 NC_005810.1 Protein Homology CDS 602331 602687 . + 0 ID=cds562;Parent=gene577;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11 NC_005810.1 RefSeq gene 602805 603332 . - . ID=gene578;Name=YP_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02900;old_locus_tag=YP0562%2CYP_0562 NC_005810.1 Protein Homology CDS 602805 603332 . - 0 ID=cds563;Parent=gene578;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11 NC_005810.1 RefSeq gene 603532 604545 . - . ID=gene579;Name=YP_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02905;old_locus_tag=YP0563%2CYP_0563 NC_005810.1 Protein Homology CDS 603532 604545 . - 0 ID=cds564;Parent=gene579;Dbxref=Genbank:WP_002216946.1;Name=WP_002216946.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002216946.1;transl_table=11 NC_005810.1 RefSeq gene 604716 606098 . + . ID=gene580;Name=YP_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02910;old_locus_tag=YP0564%2CYP_0564 NC_005810.1 Protein Homology CDS 604716 606098 . + 0 ID=cds565;Parent=gene580;Dbxref=Genbank:WP_002210171.1;Name=WP_002210171.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002210171.1;transl_table=11 NC_005810.1 RefSeq gene 606185 606391 . + . ID=gene581;Name=YP_RS02915;gbkey=Gene;gene_biotype=other;locus_tag=YP_RS02915 NC_005810.1 RefSeq repeat_region 606201 606369 . + . ID=id112;gbkey=repeat_region NC_005810.1 RefSeq gene 606394 606657 . - . ID=gene582;Name=YP_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02920;old_locus_tag=YP0565%2CYP_0565 NC_005810.1 Protein Homology CDS 606394 606657 . - 0 ID=cds566;Parent=gene582;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11 NC_005810.1 RefSeq gene 607046 607516 . - . ID=gene583;Name=YP_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02925;old_locus_tag=YP0566%2CYP_0566 NC_005810.1 Protein Homology CDS 607046 607516 . - 0 ID=cds567;Parent=gene583;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11 NC_005810.1 RefSeq gene 607980 608918 . + . ID=gene584;Name=YP_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02930;old_locus_tag=YP0567%2CYP_0567 NC_005810.1 Protein Homology CDS 607980 608918 . + 0 ID=cds568;Parent=gene584;Dbxref=Genbank:WP_002210174.1;Name=WP_002210174.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NC_005810.1 RefSeq gene 609352 609627 . - . ID=gene585;Name=YP_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02935;old_locus_tag=YP0568%2CYP_0568 NC_005810.1 Protein Homology CDS 609352 609627 . - 0 ID=cds569;Parent=gene585;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11 NC_005810.1 RefSeq gene 609811 610158 . + . ID=gene586;Name=YP_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02940;old_locus_tag=YP0569%2CYP_0569 NC_005810.1 Protein Homology CDS 609811 610158 . + 0 ID=cds570;Parent=gene586;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NC_005810.1 RefSeq gene 610255 611226 . - . ID=gene587;Name=YP_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02945;old_locus_tag=YP0570%2CYP_0570 NC_005810.1 Protein Homology CDS 610255 611226 . - 0 ID=cds571;Parent=gene587;Dbxref=Genbank:WP_002210177.1;Name=WP_002210177.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_002210177.1;transl_table=11 NC_005810.1 RefSeq gene 611486 611797 . + . ID=gene588;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YP_RS02950;old_locus_tag=YP0571%2CYP_0571 NC_005810.1 Protein Homology CDS 611486 611797 . + 0 ID=cds572;Parent=gene588;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NC_005810.1 RefSeq gene 611817 612074 . + . ID=gene589;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YP_RS02955;old_locus_tag=YP0572%2CYP_0572 NC_005810.1 Protein Homology CDS 611817 612074 . + 0 ID=cds573;Parent=gene589;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NC_005810.1 RefSeq gene 612162 613148 . + . ID=gene590;Name=YP_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02960;old_locus_tag=YP0573%2CYP_0573 NC_005810.1 Protein Homology CDS 612162 613148 . + 0 ID=cds574;Parent=gene590;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11 NC_005810.1 RefSeq gene 613149 614321 . + . ID=gene591;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=YP_RS02965;old_locus_tag=YP0574%2CYP_0574 NC_005810.1 Protein Homology CDS 613149 614321 . + 0 ID=cds575;Parent=gene591;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11 NC_005810.1 RefSeq repeat_region 613250 613276 . + . ID=id113;gbkey=repeat_region;gene=obgE NC_005810.1 RefSeq gene 614416 615483 . - . ID=gene592;Name=YP_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02970;old_locus_tag=YP0575%2CYP_0575 NC_005810.1 Protein Homology CDS 614416 615483 . - 0 ID=cds576;Parent=gene592;Dbxref=Genbank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002210182.1;transl_table=11 NC_005810.1 RefSeq gene 615480 616142 . - . ID=gene593;Name=YP_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02975;old_locus_tag=YP0576%2CYP_0576 NC_005810.1 Protein Homology CDS 615480 616142 . - 0 ID=cds577;Parent=gene593;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11 NC_005810.1 RefSeq gene 616148 617596 . - . ID=gene594;Name=YP_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02980;old_locus_tag=YP0577%2CYP_0577 NC_005810.1 Protein Homology CDS 616148 617596 . - 0 ID=cds578;Parent=gene594;Dbxref=Genbank:WP_002217314.1;Name=WP_002217314.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002217314.1;transl_table=11 NC_005810.1 RefSeq gene 617854 618330 . + . ID=gene595;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YP_RS02985;old_locus_tag=YP0578%2CYP_0578 NC_005810.1 Protein Homology CDS 617854 618330 . + 0 ID=cds579;Parent=gene595;Dbxref=Genbank:WP_002210184.1;Name=WP_002210184.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NC_005810.1 RefSeq gene 618458 618751 . - . ID=gene596;Name=YP_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS02990;old_locus_tag=YP0579%2CYP_0579 NC_005810.1 Protein Homology CDS 618458 618751 . - 0 ID=cds580;Parent=gene596;Dbxref=Genbank:WP_002210185.1;Name=WP_002210185.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002210185.1;transl_table=11 NC_005810.1 RefSeq gene 618898 619527 . + . ID=gene597;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=YP_RS02995;old_locus_tag=YP0580%2CYP_0580 NC_005810.1 Protein Homology CDS 618898 619527 . + 0 ID=cds581;Parent=gene597;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11 NC_005810.1 RefSeq gene 619584 621518 . + . ID=gene598;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=YP_RS03000;old_locus_tag=YP0581%2CYP_0581 NC_005810.1 Protein Homology CDS 619584 621518 . + 0 ID=cds582;Parent=gene598;Dbxref=Genbank:WP_002228195.1;Name=WP_002228195.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_002228195.1;transl_table=11 NC_005810.1 RefSeq gene 621638 622471 . + . ID=gene599;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YP_RS03005;old_locus_tag=YP0582%2CYP_0582 NC_005810.1 Protein Homology CDS 621638 622471 . + 0 ID=cds583;Parent=gene599;Dbxref=Genbank:WP_002210188.1;Name=WP_002210188.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_002210188.1;transl_table=11 NC_005810.1 RefSeq gene 622481 623821 . + . ID=gene600;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YP_RS03010;old_locus_tag=YP0583%2CYP_0583 NC_005810.1 Protein Homology CDS 622481 623821 . + 0 ID=cds584;Parent=gene600;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NC_005810.1 RefSeq gene 624044 624379 . + . ID=gene601;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YP_RS03015;old_locus_tag=YP0584%2CYP_0584 NC_005810.1 Protein Homology CDS 624044 624379 . + 0 ID=cds585;Parent=gene601;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NC_005810.1 RefSeq gene 624472 624558 . + . ID=gene602;Name=YP_RS03020;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS03020;old_locus_tag=tRNA-Leu_1%2CYP_t9 NC_005810.1 tRNAscan-SE tRNA 624472 624558 . + . ID=rna14;Parent=gene602;anticodon=(pos:624506..624508);gbkey=tRNA;product=tRNA-Leu NC_005810.1 tRNAscan-SE exon 624472 624558 . + . ID=id114;Parent=rna14;anticodon=(pos:624506..624508);gbkey=tRNA;product=tRNA-Leu NC_005810.1 RefSeq gene 624619 624695 . + . ID=gene603;Name=YP_RS03025;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS03025;old_locus_tag=tRNA-Met_1%2CYP_t11 NC_005810.1 tRNAscan-SE tRNA 624619 624695 . + . ID=rna15;Parent=gene603;anticodon=(pos:624653..624655);gbkey=tRNA;product=tRNA-Met NC_005810.1 tRNAscan-SE exon 624619 624695 . + . ID=id115;Parent=rna15;anticodon=(pos:624653..624655);gbkey=tRNA;product=tRNA-Met NC_005810.1 RefSeq gene 624911 625363 . + . ID=gene604;Name=YP_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03030;old_locus_tag=YP0585%2CYP_0585 NC_005810.1 Protein Homology CDS 624911 625363 . + 0 ID=cds586;Parent=gene604;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11 NC_005810.1 RefSeq gene 625385 626872 . + . ID=gene605;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YP_RS03035;old_locus_tag=YP0586%2CYP_0586 NC_005810.1 Protein Homology CDS 625385 626872 . + 0 ID=cds587;Parent=gene605;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NC_005810.1 RefSeq gene 626897 629575 . + . ID=gene606;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YP_RS03040;old_locus_tag=YP0587%2CYP_0587 NC_005810.1 Protein Homology CDS 626897 629575 . + 0 ID=cds588;Parent=gene606;Dbxref=Genbank:WP_002223151.1;Name=WP_002223151.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_002223151.1;transl_table=11 NC_005810.1 RefSeq repeat_region 627201 627248 . + . ID=id116;Note=degenerate repeat region containing 2 copies of a 24bp unit;gbkey=repeat_region;gene=infB NC_005810.1 RefSeq gene 629641 630051 . + . ID=gene607;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YP_RS03045;old_locus_tag=YP0588%2CYP_0588 NC_005810.1 Protein Homology CDS 629641 630051 . + 0 ID=cds589;Parent=gene607;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11 NC_005810.1 RefSeq gene 630051 631025 . + . ID=gene608;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YP_RS03050;old_locus_tag=YP0589%2CYP_0589 NC_005810.1 Protein Homology CDS 630051 631025 . + 0 ID=cds590;Parent=gene608;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11 NC_005810.1 RefSeq gene 631147 631416 . + . ID=gene609;Name=YP_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03055;old_locus_tag=YP0590%2CYP_0590 NC_005810.1 Protein Homology CDS 631147 631416 . + 0 ID=cds591;Parent=gene609;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NC_005810.1 RefSeq repeat_region 631447 632889 . + . ID=id117;gbkey=repeat_region NC_005810.1 RefSeq region 631449 632888 . + . ID=id118;gbkey=mobile_element NC_005810.1 RefSeq gene 631503 632018 . + . ID=gene610;Name=YP_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03060;old_locus_tag=YP0591%2CYP_0591 NC_005810.1 Protein Homology CDS 631503 632018 . + 0 ID=cds592;Parent=gene610;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_005810.1 RefSeq gene 632072 632857 . + . ID=gene611;Name=YP_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03065;old_locus_tag=YP0592%2CYP_0592 NC_005810.1 Protein Homology CDS 632072 632857 . + 0 ID=cds593;Parent=gene611;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_005810.1 RefSeq gene 633124 635241 . + . ID=gene612;Name=YP_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03070;old_locus_tag=YP0593%2CYP_0593 NC_005810.1 Protein Homology CDS 633124 635241 . + 0 ID=cds594;Parent=gene612;Dbxref=Genbank:WP_002209259.1;Name=WP_002209259.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11 NC_005810.1 RefSeq gene 635366 636250 . + . ID=gene613;Name=YP_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03075;old_locus_tag=YP0594%2CYP_0594 NC_005810.1 Protein Homology CDS 635366 636250 . + 0 ID=cds595;Parent=gene613;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NC_005810.1 RefSeq gene 636437 638431 . + . ID=gene614;Name=YP_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03080;old_locus_tag=YP0595%2CYP_0595 NC_005810.1 Protein Homology CDS 636437 638431 . + 0 ID=cds596;Parent=gene614;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NC_005810.1 RefSeq gene 638451 638624 . + . ID=gene615;Name=YP_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03085;old_locus_tag=YP0596%2CYP_0596 NC_005810.1 Protein Homology CDS 638451 638624 . + 0 ID=cds597;Parent=gene615;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11 NC_005810.1 RefSeq gene 638667 639035 . + . ID=gene616;Name=YP_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03090;old_locus_tag=YP0597%2CYP_0597 NC_005810.1 Protein Homology CDS 638667 639035 . + 0 ID=cds598;Parent=gene616;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11 NC_005810.1 RefSeq gene 639059 639370 . + . ID=gene617;Name=YP_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03095;old_locus_tag=YP0598%2CYP_0598 NC_005810.1 Protein Homology CDS 639059 639370 . + 0 ID=cds599;Parent=gene617;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11 NC_005810.1 RefSeq repeat_region 639401 639575 . + . ID=id119;gbkey=repeat_region NC_005810.1 RefSeq gene 639625 640680 . - . ID=gene618;Name=YP_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03100;old_locus_tag=YP0599%2CYP_0599 NC_005810.1 Protein Homology CDS 639625 640680 . - 0 ID=cds600;Parent=gene618;Dbxref=Genbank:WP_002214817.1;Name=WP_002214817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214817.1;transl_table=11 NC_005810.1 RefSeq gene 641188 642348 . + . ID=gene619;Name=YP_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03105;old_locus_tag=YP0600%2CYP_0600 NC_005810.1 Protein Homology CDS 641188 642348 . + 0 ID=cds601;Parent=gene619;Dbxref=Genbank:WP_002209266.1;Name=WP_002209266.1;gbkey=CDS;product=acriflavine resistance protein E;protein_id=WP_002209266.1;transl_table=11 NC_005810.1 RefSeq gene 642352 645477 . + . ID=gene620;Name=YP_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03110;old_locus_tag=YP0601%2CYP_0601 NC_005810.1 Protein Homology CDS 642352 645477 . + 0 ID=cds602;Parent=gene620;Dbxref=Genbank:WP_002209267.1;Name=WP_002209267.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002209267.1;transl_table=11 NC_005810.1 RefSeq gene 645479 646885 . + . ID=gene621;Name=YP_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03115;old_locus_tag=YP0602%2CYP_0602 NC_005810.1 Protein Homology CDS 645479 646885 . + 0 ID=cds603;Parent=gene621;Dbxref=Genbank:WP_002209268.1;Name=WP_002209268.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002209268.1;transl_table=11 NC_005810.1 RefSeq gene 647026 647904 . - . ID=gene622;Name=YP_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03120;old_locus_tag=YP0603%2CYP_0603 NC_005810.1 Protein Homology CDS 647026 647904 . - 0 ID=cds604;Parent=gene622;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11 NC_005810.1 RefSeq gene 647916 648911 . - . ID=gene623;Name=YP_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03125;old_locus_tag=YP0604%2CYP_0604 NC_005810.1 Protein Homology CDS 647916 648911 . - 0 ID=cds605;Parent=gene623;Dbxref=Genbank:WP_002209270.1;Name=WP_002209270.1;gbkey=CDS;product=protease;protein_id=WP_002209270.1;transl_table=11 NC_005810.1 RefSeq repeat_region 648939 648964 . + . ID=id120;Note=exact repeat region containing 2 copies of a 13 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 649021 649146 . - . ID=gene624;Name=YP_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03130;old_locus_tag=YP0605%2CYP_0605 NC_005810.1 Protein Homology CDS 649021 649146 . - 0 ID=cds606;Parent=gene624;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11 NC_005810.1 RefSeq gene 649227 649748 . + . ID=gene625;Name=YP_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03135;old_locus_tag=YP0606%2CYP_0606 NC_005810.1 Protein Homology CDS 649227 649748 . + 0 ID=cds607;Parent=gene625;Dbxref=Genbank:WP_002209272.1;Name=WP_002209272.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_002209272.1;transl_table=11 NC_005810.1 RefSeq gene 649742 650248 . + . ID=gene626;Name=YP_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03140;old_locus_tag=YP0607%2CYP_0607 NC_005810.1 Protein Homology CDS 649742 650248 . + 0 ID=cds608;Parent=gene626;Dbxref=Genbank:WP_002209273.1;Name=WP_002209273.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209273.1;transl_table=11 NC_005810.1 RefSeq repeat_region 650325 650456 . + . ID=id121;gbkey=repeat_region NC_005810.1 RefSeq gene 650423 650710 . - . ID=gene627;Name=YP_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03145;old_locus_tag=YP0608%2CYP_0608 NC_005810.1 Protein Homology CDS 650423 650710 . - 0 ID=cds609;Parent=gene627;Dbxref=Genbank:WP_002209274.1;Name=WP_002209274.1;gbkey=CDS;product=nuclease;protein_id=WP_002209274.1;transl_table=11 NC_005810.1 RefSeq gene 650941 652959 . - . ID=gene628;Name=YP_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03150;old_locus_tag=YP0609%2CYP_0609 NC_005810.1 Protein Homology CDS 650941 652959 . - 0 ID=cds610;Parent=gene628;Dbxref=Genbank:WP_002209275.1;Name=WP_002209275.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209275.1;transl_table=11 NC_005810.1 RefSeq gene 652983 654206 . - . ID=gene629;Name=YP_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03155;old_locus_tag=YP0610%2CYP_0610 NC_005810.1 Protein Homology CDS 652983 654206 . - 0 ID=cds611;Parent=gene629;Dbxref=Genbank:WP_002209276.1;Name=WP_002209276.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209276.1;transl_table=11 NC_005810.1 RefSeq gene 654767 656080 . + . ID=gene630;Name=YP_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03160;old_locus_tag=YP0611%2CYP_0611 NC_005810.1 Protein Homology CDS 654767 656080 . + 0 ID=cds612;Parent=gene630;Dbxref=Genbank:WP_002209277.1;Name=WP_002209277.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209277.1;transl_table=11 NC_005810.1 RefSeq gene 656088 656972 . + . ID=gene631;Name=YP_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03165;old_locus_tag=YP0612%2CYP_0612 NC_005810.1 Protein Homology CDS 656088 656972 . + 0 ID=cds613;Parent=gene631;Dbxref=Genbank:WP_002209278.1;Name=WP_002209278.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209278.1;transl_table=11 NC_005810.1 RefSeq gene 656991 657830 . + . ID=gene632;Name=YP_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03170;old_locus_tag=YP0613%2CYP_0613 NC_005810.1 Protein Homology CDS 656991 657830 . + 0 ID=cds614;Parent=gene632;Dbxref=Genbank:WP_002209279.1;Name=WP_002209279.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NC_005810.1 RefSeq gene 657842 658932 . + . ID=gene633;Name=YP_RS03175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS03175;old_locus_tag=YP0614;pseudo=true NC_005810.1 Protein Homology CDS 657842 658932 . + 0 ID=cds615;Parent=gene633;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 658947 660113 . + . ID=gene634;Name=YP_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03180;old_locus_tag=YP0615%2CYP_0615 NC_005810.1 Protein Homology CDS 658947 660113 . + 0 ID=cds616;Parent=gene634;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11 NC_005810.1 RefSeq repeat_region 660100 660129 . + . ID=id122;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 660212 660655 . + . ID=gene635;Name=YP_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03185;old_locus_tag=YP0616%2CYP_0616 NC_005810.1 Protein Homology CDS 660212 660655 . + 0 ID=cds617;Parent=gene635;Dbxref=Genbank:WP_002209282.1;Name=WP_002209282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209282.1;transl_table=11 NC_005810.1 RefSeq gene 660807 661445 . + . ID=gene636;Name=YP_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03190;old_locus_tag=YP0617%2CYP_0617 NC_005810.1 Protein Homology CDS 660807 661445 . + 0 ID=cds618;Parent=gene636;Dbxref=Genbank:WP_002209283.1;Name=WP_002209283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209283.1;transl_table=11 NC_005810.1 RefSeq gene 661458 662210 . - . ID=gene637;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YP_RS03195;old_locus_tag=YP0618%2CYP_0618 NC_005810.1 Protein Homology CDS 661458 662210 . - 0 ID=cds619;Parent=gene637;Dbxref=Genbank:WP_002209284.1;Name=WP_002209284.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_002209284.1;transl_table=11 NC_005810.1 RefSeq gene 662201 662782 . - . ID=gene638;Name=YP_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03200;old_locus_tag=YP0619%2CYP_0619 NC_005810.1 Protein Homology CDS 662201 662782 . - 0 ID=cds620;Parent=gene638;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11 NC_005810.1 RefSeq gene 662782 663918 . - . ID=gene639;Name=YP_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03205;old_locus_tag=YP0620%2CYP_0620 NC_005810.1 Protein Homology CDS 662782 663918 . - 0 ID=cds621;Parent=gene639;Dbxref=Genbank:WP_002209286.1;Name=WP_002209286.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_002209286.1;transl_table=11 NC_005810.1 RefSeq gene 663915 664634 . - . ID=gene640;Name=YP_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03210;old_locus_tag=YP0621%2CYP_0621 NC_005810.1 Protein Homology CDS 663915 664634 . - 0 ID=cds622;Parent=gene640;Dbxref=Genbank:WP_002209287.1;Name=WP_002209287.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002209287.1;transl_table=11 NC_005810.1 RefSeq gene 665023 665814 . - . ID=gene641;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YP_RS03215;old_locus_tag=YP0623%2CYP_0623 NC_005810.1 Protein Homology CDS 665023 665814 . - 0 ID=cds623;Parent=gene641;Dbxref=Genbank:WP_002209288.1;Name=WP_002209288.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_002209288.1;transl_table=11 NC_005810.1 RefSeq gene 665814 666695 . - . ID=gene642;Name=YP_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03220;old_locus_tag=YP0624%2CYP_0624 NC_005810.1 Protein Homology CDS 665814 666695 . - 0 ID=cds624;Parent=gene642;Dbxref=Genbank:WP_002209289.1;Name=WP_002209289.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_002209289.1;transl_table=11 NC_005810.1 RefSeq gene 666688 667866 . - . ID=gene643;Name=YP_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03225;old_locus_tag=YP0625%2CYP_0625 NC_005810.1 Protein Homology CDS 666688 667866 . - 0 ID=cds625;Parent=gene643;Dbxref=Genbank:WP_002209290.1;Name=WP_002209290.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_002209290.1;transl_table=11 NC_005810.1 RefSeq repeat_region 666719 666754 . + . ID=id123;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 667866 668492 . - . ID=gene644;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=YP_RS03230;old_locus_tag=YP0626%2CYP_0626 NC_005810.1 Protein Homology CDS 667866 668492 . - 0 ID=cds626;Parent=gene644;Dbxref=Genbank:WP_002209291.1;Name=WP_002209291.1;gbkey=CDS;gene=phnH;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_002209291.1;transl_table=11 NC_005810.1 RefSeq gene 668492 668968 . - . ID=gene645;Name=YP_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03235;old_locus_tag=YP0627%2CYP_0627 NC_005810.1 Protein Homology CDS 668492 668968 . - 0 ID=cds627;Parent=gene645;Dbxref=Genbank:WP_002209292.1;Name=WP_002209292.1;gbkey=CDS;product=phosphonate metabolism protein PhnG;protein_id=WP_002209292.1;transl_table=11 NC_005810.1 RefSeq gene 668969 669694 . - . ID=gene646;Name=YP_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03240;old_locus_tag=YP0628%2CYP_0628 NC_005810.1 Protein Homology CDS 668969 669694 . - 0 ID=cds628;Parent=gene646;Dbxref=Genbank:WP_002209293.1;Name=WP_002209293.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_002209293.1;transl_table=11 NC_005810.1 RefSeq repeat_region 669981 670014 . + . ID=id124;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 670022 670486 . - . ID=gene647;Name=YP_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03245;old_locus_tag=YP0630%2CYP_0630 NC_005810.1 Protein Homology CDS 670022 670486 . - 0 ID=cds629;Parent=gene647;Dbxref=Genbank:WP_025470743.1;Name=WP_025470743.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_025470743.1;transl_table=11 NC_005810.1 RefSeq repeat_region 670607 670636 . + . ID=id125;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 670663 672801 . - . ID=gene648;Name=YP_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03250;old_locus_tag=YP0631%2CYP_0631 NC_005810.1 Protein Homology CDS 670663 672801 . - 0 ID=cds630;Parent=gene648;Dbxref=Genbank:WP_002209296.1;Name=WP_002209296.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NC_005810.1 RefSeq gene 673235 673951 . - . ID=gene649;Name=YP_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03255;old_locus_tag=YP0632%2CYP_0632 NC_005810.1 Protein Homology CDS 673235 673951 . - 0 ID=cds631;Parent=gene649;Dbxref=Genbank:WP_011171771.1;Name=WP_011171771.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_011171771.1;transl_table=11 NC_005810.1 RefSeq gene 673938 674816 . - . ID=gene650;Name=YP_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03260;old_locus_tag=YP0633%2CYP_0633 NC_005810.1 Protein Homology CDS 673938 674816 . - 0 ID=cds632;Parent=gene650;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NC_005810.1 RefSeq gene 674809 675645 . - . ID=gene651;Name=YP_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03265;old_locus_tag=YP0634%2CYP_0634 NC_005810.1 Protein Homology CDS 674809 675645 . - 0 ID=cds633;Parent=gene651;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NC_005810.1 RefSeq gene 675664 676713 . - . ID=gene652;Name=YP_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03270;old_locus_tag=YP0635%2CYP_0635 NC_005810.1 Protein Homology CDS 675664 676713 . - 0 ID=cds634;Parent=gene652;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NC_005810.1 RefSeq gene 676809 678376 . - . ID=gene653;Name=YP_RS03275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS03275;old_locus_tag=YP0636;pseudo=true NC_005810.1 Protein Homology CDS 676809 678376 . - 0 ID=cds635;Parent=gene653;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 678572 678741 . + . ID=id126;gbkey=repeat_region NC_005810.1 RefSeq gene 679015 679473 . + . ID=gene654;Name=YP_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03280;old_locus_tag=YP0637%2CYP_0637 NC_005810.1 Protein Homology CDS 679015 679473 . + 0 ID=cds636;Parent=gene654;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11 NC_005810.1 RefSeq gene 679780 680787 . - . ID=gene655;Name=YP_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03285;old_locus_tag=YP0638%2CYP_0638 NC_005810.1 Protein Homology CDS 679780 680787 . - 0 ID=cds637;Parent=gene655;Dbxref=Genbank:WP_002209302.1;Name=WP_002209302.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_002209302.1;transl_table=11 NC_005810.1 RefSeq gene 680999 681430 . + . ID=gene656;Name=YP_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03290;old_locus_tag=YP0639%2CYP_0639 NC_005810.1 Protein Homology CDS 680999 681430 . + 0 ID=cds638;Parent=gene656;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11 NC_005810.1 RefSeq repeat_region 681474 681885 . + . ID=id127;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 681474 681771 . + . ID=id128;Note=degenerate repeat region containing 2 copies of a 149bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 681611 681636 . + . ID=id129;Note=degenerate repeat region containing 2 copies of a 13bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 681760 681785 . + . ID=id130;Note=degenerate repeat region containing 2 copies of a 13bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 681937 682440 . - . ID=gene657;Name=YP_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03295;old_locus_tag=YP0640%2CYP_0640 NC_005810.1 Protein Homology CDS 681937 682440 . - 0 ID=cds639;Parent=gene657;Dbxref=Genbank:WP_002223170.1;Name=WP_002223170.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002223170.1;transl_table=11 NC_005810.1 RefSeq gene 682583 685480 . - . ID=gene658;Name=YP_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03300;old_locus_tag=YP0641%2CYP_0641 NC_005810.1 Protein Homology CDS 682583 685480 . - 0 ID=cds640;Parent=gene658;Dbxref=Genbank:WP_002209307.1;Name=WP_002209307.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_002209307.1;transl_table=11 NC_005810.1 RefSeq gene 685493 685942 . - . ID=gene659;Name=YP_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03305;old_locus_tag=YP0642%2CYP_0642 NC_005810.1 Protein Homology CDS 685493 685942 . - 0 ID=cds641;Parent=gene659;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NC_005810.1 RefSeq gene 686093 687604 . - . ID=gene660;Name=YP_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03310;old_locus_tag=YP0643%2CYP_0643 NC_005810.1 Protein Homology CDS 686093 687604 . - 0 ID=cds642;Parent=gene660;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NC_005810.1 RefSeq gene 687884 688978 . + . ID=gene661;Name=YP_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03315;old_locus_tag=YP0644%2CYP_0644 NC_005810.1 Protein Homology CDS 687884 688978 . + 0 ID=cds643;Parent=gene661;Dbxref=Genbank:WP_002209311.1;Name=WP_002209311.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NC_005810.1 RefSeq gene 688978 690054 . + . ID=gene662;Name=YP_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03320;old_locus_tag=YP0645%2CYP_0645 NC_005810.1 Protein Homology CDS 688978 690054 . + 0 ID=cds644;Parent=gene662;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NC_005810.1 RefSeq gene 690159 690243 . + . ID=gene663;Name=YP_RS03325;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS03325;old_locus_tag=tRNA-Leu_2%2CYP_t12 NC_005810.1 tRNAscan-SE tRNA 690159 690243 . + . ID=rna16;Parent=gene663;anticodon=(pos:690193..690195);gbkey=tRNA;product=tRNA-Leu NC_005810.1 tRNAscan-SE exon 690159 690243 . + . ID=id131;Parent=rna16;anticodon=(pos:690193..690195);gbkey=tRNA;product=tRNA-Leu NC_005810.1 RefSeq repeat_region 690238 690449 . + . ID=id132;gbkey=repeat_region NC_005810.1 RefSeq gene 690442 691701 . + . ID=gene664;Name=YP_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03330;old_locus_tag=YP0646%2CYP_0646 NC_005810.1 Protein Homology CDS 690442 691701 . + 0 ID=cds645;Parent=gene664;Dbxref=Genbank:WP_002209313.1;Name=WP_002209313.1;gbkey=CDS;product=integrase;protein_id=WP_002209313.1;transl_table=11 NC_005810.1 RefSeq gene 691855 693765 . + . ID=gene665;Name=YP_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03335;old_locus_tag=YP0647%2CYP_0647 NC_005810.1 Protein Homology CDS 691855 693765 . + 0 ID=cds646;Parent=gene665;Dbxref=Genbank:WP_002209314.1;Name=WP_002209314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209314.1;transl_table=11 NC_005810.1 RefSeq gene 693758 694867 . + . ID=gene666;Name=YP_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03340;old_locus_tag=YP0648 NC_005810.1 Protein Homology CDS 693758 694867 . + 0 ID=cds647;Parent=gene666;Dbxref=Genbank:WP_002209315.1;Name=WP_002209315.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209315.1;transl_table=11 NC_005810.1 RefSeq repeat_region 694851 697399 . + . ID=id133;gbkey=repeat_region NC_005810.1 RefSeq region 694853 696805 . - . ID=id134;gbkey=mobile_element NC_005810.1 RefSeq gene 694918 695697 . - . ID=gene667;Name=YP_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03345;old_locus_tag=YP0649%2CYP_0649 NC_005810.1 Protein Homology CDS 694918 695697 . - 0 ID=cds648;Parent=gene667;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 695697 696719 . - . ID=gene668;Name=YP_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03350;old_locus_tag=YP0650%2CYP_0650 NC_005810.1 Protein Homology CDS 695697 696719 . - 0 ID=cds649;Parent=gene668;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 696776 697288 . + . ID=gene669;Name=YP_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03355;old_locus_tag=YP0651%2CYP_0651 NC_005810.1 Protein Homology CDS 696776 697288 . + 0 ID=cds650;Parent=gene669;Dbxref=Genbank:WP_002209316.1;Name=WP_002209316.1;gbkey=CDS;product=transposase;protein_id=WP_002209316.1;transl_table=11 NC_005810.1 RefSeq region 696804 697396 . + . ID=id135;Note=partial element;gbkey=mobile_element NC_005810.1 RefSeq gene 697620 697982 . - . ID=gene670;Name=YP_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03360;old_locus_tag=YP0652 NC_005810.1 Protein Homology CDS 697620 697982 . - 0 ID=cds651;Parent=gene670;Dbxref=Genbank:WP_002209468.1;Name=WP_002209468.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_002209468.1;transl_table=11 NC_005810.1 RefSeq gene 698337 699068 . - . ID=gene671;Name=YP_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03365;old_locus_tag=YP0653%2CYP_0653 NC_005810.1 Protein Homology CDS 698337 699068 . - 0 ID=cds652;Parent=gene671;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11 NC_005810.1 RefSeq gene 699204 700181 . + . ID=gene672;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YP_RS03370;old_locus_tag=YP0654%2CYP_0654 NC_005810.1 Protein Homology CDS 699204 700181 . + 0 ID=cds653;Parent=gene672;Dbxref=Genbank:WP_002231132.1;Name=WP_002231132.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridine synthase D;protein_id=WP_002231132.1;transl_table=11 NC_005810.1 RefSeq gene 700183 700914 . + . ID=gene673;Name=YP_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03375;old_locus_tag=YP0655%2CYP_0655 NC_005810.1 Protein Homology CDS 700183 700914 . + 0 ID=cds654;Parent=gene673;Dbxref=Genbank:WP_002209471.1;Name=WP_002209471.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209471.1;transl_table=11 NC_005810.1 RefSeq gene 701044 703617 . + . ID=gene674;Name=YP_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03380;old_locus_tag=YP0656%2CYP_0656 NC_005810.1 Protein Homology CDS 701044 703617 . + 0 ID=cds655;Parent=gene674;Dbxref=Genbank:WP_002217405.1;Name=WP_002217405.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_002217405.1;transl_table=11 NC_005810.1 RefSeq repeat_region 703699 709547 . + . ID=id136;gbkey=repeat_region NC_005810.1 RefSeq gene 704131 705679 . + . ID=gene675;Name=YP_RS03390;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS03390;old_locus_tag=16S_rRNA_3%2CYP_r7 NC_005810.1 RefSeq rRNA 704131 705679 . + . ID=rna17;Parent=gene675;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq exon 704131 705679 . + . ID=id137;Parent=rna17;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq gene 705779 705855 . + . ID=gene676;Name=YP_RS03395;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS03395;old_locus_tag=tRNA-Ile_2%2CYP_t13 NC_005810.1 tRNAscan-SE tRNA 705779 705855 . + . ID=rna18;Parent=gene676;anticodon=(pos:705813..705815);gbkey=tRNA;product=tRNA-Ile NC_005810.1 tRNAscan-SE exon 705779 705855 . + . ID=id138;Parent=rna18;anticodon=(pos:705813..705815);gbkey=tRNA;product=tRNA-Ile NC_005810.1 RefSeq gene 705907 705982 . + . ID=gene677;Name=YP_RS03400;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS03400;old_locus_tag=tRNA-Ala_2%2CYP_t14 NC_005810.1 tRNAscan-SE tRNA 705907 705982 . + . ID=rna19;Parent=gene677;anticodon=(pos:705940..705942);gbkey=tRNA;product=tRNA-Ala NC_005810.1 tRNAscan-SE exon 705907 705982 . + . ID=id139;Parent=rna19;anticodon=(pos:705940..705942);gbkey=tRNA;product=tRNA-Ala NC_005810.1 RefSeq gene 706192 709125 . + . ID=gene678;Name=YP_RS03405;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS03405;old_locus_tag=23S_rRNA_3%2CYP_r8 NC_005810.1 RefSeq rRNA 706192 709125 . + . ID=rna20;Parent=gene678;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq exon 706192 709125 . + . ID=id140;Parent=rna20;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq gene 709217 709332 . + . ID=gene679;Name=YP_RS03410;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS03410 NC_005810.1 cmsearch rRNA 709217 709332 . + . ID=rna21;Parent=gene679;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 709217 709332 . + . ID=id141;Parent=rna21;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq repeat_region 709348 709545 . + . ID=id142;Note=degenerate repeat region containing 3 copies of a 66bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 709420 709611 . + . ID=gene680;Name=YP_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03415 NC_005810.1 Protein Homology CDS 709420 709611 . + 0 ID=cds656;Parent=gene680;Dbxref=Genbank:WP_002360510.1;Name=WP_002360510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002360510.1;transl_table=11 NC_005810.1 RefSeq gene 709720 710061 . - . ID=gene681;Name=YP_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03420;old_locus_tag=YP0657%2CYP_0657 NC_005810.1 Protein Homology CDS 709720 710061 . - 0 ID=cds657;Parent=gene681;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11 NC_005810.1 RefSeq gene 710123 711478 . - . ID=gene682;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YP_RS03425;old_locus_tag=YP0658%2CYP_0658 NC_005810.1 Protein Homology CDS 710123 711478 . - 0 ID=cds658;Parent=gene682;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11 NC_005810.1 RefSeq gene 711654 714296 . - . ID=gene683;Name=YP_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03430;old_locus_tag=YP0659%2CYP_0659 NC_005810.1 Protein Homology CDS 711654 714296 . - 0 ID=cds659;Parent=gene683;Dbxref=Genbank:WP_002223249.1;Name=WP_002223249.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=protein lysine acetyltransferase;protein_id=WP_002223249.1;transl_table=11 NC_005810.1 RefSeq gene 714339 715088 . - . ID=gene684;Name=YP_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03435;old_locus_tag=YP0660%2CYP_0660 NC_005810.1 Protein Homology CDS 714339 715088 . - 0 ID=cds660;Parent=gene684;Dbxref=Genbank:WP_002208749.1;Name=WP_002208749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208749.1;transl_table=11 NC_005810.1 RefSeq gene 715258 715695 . - . ID=gene685;Name=YP_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03440;old_locus_tag=YP0661%2CYP_0661 NC_005810.1 Protein Homology CDS 715258 715695 . - 0 ID=cds661;Parent=gene685;Dbxref=Genbank:WP_002216643.1;Name=WP_002216643.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002216643.1;transl_table=11 NC_005810.1 RefSeq gene 715947 717113 . + . ID=gene686;Name=YP_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03445;old_locus_tag=YP0662%2CYP_0662 NC_005810.1 Protein Homology CDS 715947 717113 . + 0 ID=cds662;Parent=gene686;Dbxref=Genbank:WP_002208747.1;Name=WP_002208747.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208747.1;transl_table=11 NC_005810.1 RefSeq repeat_region 716050 716079 . + . ID=id143;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 717236 718771 . - . ID=gene687;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YP_RS03450;old_locus_tag=YP0663%2CYP_0663 NC_005810.1 Protein Homology CDS 717236 718771 . - 0 ID=cds663;Parent=gene687;Dbxref=Genbank:WP_002208746.1;Name=WP_002208746.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NC_005810.1 RefSeq gene 718810 719982 . - . ID=gene688;Name=YP_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03455;old_locus_tag=YP0664%2CYP_0664 NC_005810.1 Protein Homology CDS 718810 719982 . - 0 ID=cds664;Parent=gene688;Dbxref=Genbank:WP_002208745.1;Name=WP_002208745.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein A;protein_id=WP_002208745.1;transl_table=11 NC_005810.1 RefSeq gene 720366 720878 . - . ID=gene689;Name=YP_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03460;old_locus_tag=YP0666%2CYP_0666 NC_005810.1 Protein Homology CDS 720366 720878 . - 0 ID=cds665;Parent=gene689;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11 NC_005810.1 RefSeq gene 721050 721391 . - . ID=gene690;Name=YP_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03465;old_locus_tag=YP0667%2CYP_0667 NC_005810.1 Protein Homology CDS 721050 721391 . - 0 ID=cds666;Parent=gene690;Dbxref=Genbank:WP_002208743.1;Name=WP_002208743.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002208743.1;transl_table=11 NC_005810.1 RefSeq gene 721388 722161 . - . ID=gene691;Name=YP_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03470;old_locus_tag=YP0668%2CYP_0668 NC_005810.1 Protein Homology CDS 721388 722161 . - 0 ID=cds667;Parent=gene691;Dbxref=Genbank:WP_002208742.1;Name=WP_002208742.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002208742.1;transl_table=11 NC_005810.1 RefSeq gene 722321 723520 . - . ID=gene692;Name=YP_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03475;old_locus_tag=YP0669%2CYP_0669 NC_005810.1 Protein Homology CDS 722321 723520 . - 0 ID=cds668;Parent=gene692;Dbxref=Genbank:WP_002231118.1;Name=WP_002231118.1;gbkey=CDS;product=transporter;protein_id=WP_002231118.1;transl_table=11 NC_005810.1 RefSeq gene 723748 724134 . - . ID=gene693;Name=YP_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03480;old_locus_tag=YP0670%2CYP_0670 NC_005810.1 Protein Homology CDS 723748 724134 . - 0 ID=cds669;Parent=gene693;Dbxref=Genbank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002264506.1;transl_table=11 NC_005810.1 RefSeq repeat_region 724187 724250 . + . ID=id144;Note=degenerate repeat region containing 4 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 724244 725641 . - . ID=gene694;Name=YP_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03485;old_locus_tag=YP0671%2CYP_0671 NC_005810.1 Protein Homology CDS 724244 725641 . - 0 ID=cds670;Parent=gene694;Dbxref=Genbank:WP_002208739.1;Name=WP_002208739.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_002208739.1;transl_table=11 NC_005810.1 RefSeq gene 725638 725841 . - . ID=gene695;Name=YP_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03490;old_locus_tag=YP0672%2CYP_0672 NC_005810.1 Protein Homology CDS 725638 725841 . - 0 ID=cds671;Parent=gene695;Dbxref=Genbank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208738.1;transl_table=11 NC_005810.1 RefSeq gene 726151 726984 . + . ID=gene696;Name=YP_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03495;old_locus_tag=YP0674%2CYP_0674 NC_005810.1 Protein Homology CDS 726151 726984 . + 0 ID=cds672;Parent=gene696;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NC_005810.1 RefSeq gene 726986 727201 . + . ID=gene697;Name=YP_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03500;old_locus_tag=YP0675%2CYP_0675 NC_005810.1 Protein Homology CDS 726986 727201 . + 0 ID=cds673;Parent=gene697;Dbxref=Genbank:WP_002231117.1;Name=WP_002231117.1;gbkey=CDS;product=membrane protein;protein_id=WP_002231117.1;transl_table=11 NC_005810.1 RefSeq gene 727312 728100 . + . ID=gene698;Name=YP_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03505;old_locus_tag=YP0676%2CYP_0676 NC_005810.1 Protein Homology CDS 727312 728100 . + 0 ID=cds674;Parent=gene698;Dbxref=Genbank:WP_002208735.1;Name=WP_002208735.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002208735.1;transl_table=11 NC_005810.1 RefSeq gene 728113 728781 . + . ID=gene699;Name=YP_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03510;old_locus_tag=YP0677%2CYP_0677 NC_005810.1 Protein Homology CDS 728113 728781 . + 0 ID=cds675;Parent=gene699;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NC_005810.1 RefSeq gene 728778 729431 . + . ID=gene700;Name=YP_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03515;old_locus_tag=YP0678%2CYP_0678 NC_005810.1 Protein Homology CDS 728778 729431 . + 0 ID=cds676;Parent=gene700;Dbxref=Genbank:WP_002208733.1;Name=WP_002208733.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002208733.1;transl_table=11 NC_005810.1 RefSeq gene 729412 730158 . + . ID=gene701;Name=YP_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03520;old_locus_tag=YP0679%2CYP_0679 NC_005810.1 Protein Homology CDS 729412 730158 . + 0 ID=cds677;Parent=gene701;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NC_005810.1 RefSeq gene 730190 731113 . + . ID=gene702;Name=YP_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03525 NC_005810.1 Protein Homology CDS 730190 731113 . + 0 ID=cds678;Parent=gene702;Dbxref=Genbank:WP_002208731.1;Name=WP_002208731.1;gbkey=CDS;product=purine catabolism protein PucG;protein_id=WP_002208731.1;transl_table=11 NC_005810.1 RefSeq repeat_region 731095 733054 . + . ID=id145;gbkey=repeat_region NC_005810.1 RefSeq region 731099 733051 . - . ID=id146;gbkey=mobile_element NC_005810.1 RefSeq gene 731164 731943 . - . ID=gene703;Name=YP_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03530;old_locus_tag=YP0681%2CYP_0681 NC_005810.1 Protein Homology CDS 731164 731943 . - 0 ID=cds679;Parent=gene703;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 731943 732965 . - . ID=gene704;Name=YP_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03535;old_locus_tag=YP0682%2CYP_0682 NC_005810.1 Protein Homology CDS 731943 732965 . - 0 ID=cds680;Parent=gene704;Dbxref=Genbank:WP_011171772.1;Name=WP_011171772.1;gbkey=CDS;product=transposase;protein_id=WP_011171772.1;transl_table=11 NC_005810.1 RefSeq gene 733035 733493 . + . ID=gene705;Name=YP_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03540 NC_005810.1 Protein Homology CDS 733035 733493 . + 0 ID=cds681;Parent=gene705;Dbxref=Genbank:WP_002208730.1;Name=WP_002208730.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_002208730.1;transl_table=11 NC_005810.1 RefSeq repeat_region 733381 733452 . + . ID=id147;Note=degenerate repeat region containing 4 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 733493 734794 . + . ID=gene706;Name=YP_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03545;old_locus_tag=YP0683%2CYP_0683 NC_005810.1 Protein Homology CDS 733493 734794 . + 0 ID=cds682;Parent=gene706;Dbxref=Genbank:WP_002231082.1;Name=WP_002231082.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_002231082.1;transl_table=11 NC_005810.1 RefSeq repeat_region 734733 734768 . + . ID=id148;Note=degenerate repeat region containing 4 copies of a 9bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 734977 735156 . + . ID=id149;gbkey=repeat_region NC_005810.1 RefSeq gene 735883 737673 . + . ID=gene707;Name=YP_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03550;old_locus_tag=YP0684%2CYP_0684 NC_005810.1 Protein Homology CDS 735883 737673 . + 0 ID=cds683;Parent=gene707;Dbxref=Genbank:WP_002214693.1;Name=WP_002214693.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002214693.1;transl_table=11 NC_005810.1 RefSeq gene 737714 743446 . + . ID=gene708;Name=YP_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03555;old_locus_tag=YP0685%2CYP_0685 NC_005810.1 Protein Homology CDS 737714 743446 . + 0 ID=cds684;Parent=gene708;Dbxref=Genbank:WP_002224962.1;Name=WP_002224962.1;gbkey=CDS;product=adhesin;protein_id=WP_002224962.1;transl_table=11 NC_005810.1 RefSeq gene 743601 745454 . + . ID=gene709;Name=YP_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03560;old_locus_tag=YP0686%2CYP_0686 NC_005810.1 Protein Homology CDS 743601 745454 . + 0 ID=cds685;Parent=gene709;Dbxref=Genbank:WP_002208722.1;Name=WP_002208722.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002208722.1;transl_table=11 NC_005810.1 RefSeq gene 745456 746202 . + . ID=gene710;Name=YP_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03565;old_locus_tag=YP0687%2CYP_0687 NC_005810.1 Protein Homology CDS 745456 746202 . + 0 ID=cds686;Parent=gene710;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NC_005810.1 RefSeq gene 746374 748821 . - . ID=gene711;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YP_RS03570;old_locus_tag=YP0688%2CYP_0688 NC_005810.1 Protein Homology CDS 746374 748821 . - 0 ID=cds687;Parent=gene711;Dbxref=Genbank:WP_002214691.1;Name=WP_002214691.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_002214691.1;transl_table=11 NC_005810.1 RefSeq gene 749061 749642 . + . ID=gene712;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=YP_RS03575;old_locus_tag=YP0689%2CYP_0689 NC_005810.1 Protein Homology CDS 749061 749642 . + 0 ID=cds688;Parent=gene712;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11 NC_005810.1 RefSeq gene 749845 750618 . + . ID=gene713;Name=YP_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03580;old_locus_tag=YP0690%2CYP_0690 NC_005810.1 Protein Homology CDS 749845 750618 . + 0 ID=cds689;Parent=gene713;Dbxref=Genbank:WP_002208719.1;Name=WP_002208719.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NC_005810.1 RefSeq gene 750583 751323 . - . ID=gene714;Name=YP_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03585;old_locus_tag=YP0691%2CYP_0691 NC_005810.1 Protein Homology CDS 750583 751323 . - 0 ID=cds690;Parent=gene714;Dbxref=Genbank:WP_002208718.1;Name=WP_002208718.1;gbkey=CDS;product=transpeptidase;protein_id=WP_002208718.1;transl_table=11 NC_005810.1 RefSeq gene 751819 753162 . + . ID=gene715;Name=YP_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03590;old_locus_tag=YP0693%2CYP_0693 NC_005810.1 Protein Homology CDS 751819 753162 . + 0 ID=cds691;Parent=gene715;Dbxref=Genbank:WP_002208717.1;Name=WP_002208717.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11 NC_005810.1 RefSeq gene 753166 754407 . + . ID=gene716;Name=YP_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03595;old_locus_tag=YP0694%2CYP_0694 NC_005810.1 Protein Homology CDS 753166 754407 . + 0 ID=cds692;Parent=gene716;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11 NC_005810.1 RefSeq gene 754397 755197 . + . ID=gene717;Name=YP_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03600;old_locus_tag=YP0695%2CYP_0695 NC_005810.1 Protein Homology CDS 754397 755197 . + 0 ID=cds693;Parent=gene717;Dbxref=Genbank:WP_002208715.1;Name=WP_002208715.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_002208715.1;transl_table=11 NC_005810.1 RefSeq gene 755190 755819 . + . ID=gene718;Name=YP_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03605;old_locus_tag=YP0696%2CYP_0696 NC_005810.1 Protein Homology CDS 755190 755819 . + 0 ID=cds694;Parent=gene718;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11 NC_005810.1 RefSeq gene 755826 756422 . + . ID=gene719;Name=YP_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03610;old_locus_tag=YP0697%2CYP_0697 NC_005810.1 Protein Homology CDS 755826 756422 . + 0 ID=cds695;Parent=gene719;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11 NC_005810.1 RefSeq gene 756438 757661 . + . ID=gene720;Name=YP_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03615;old_locus_tag=YP0698%2CYP_0698 NC_005810.1 Protein Homology CDS 756438 757661 . + 0 ID=cds696;Parent=gene720;Dbxref=Genbank:WP_002208711.1;Name=WP_002208711.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_002208711.1;transl_table=11 NC_005810.1 RefSeq gene 757729 758724 . + . ID=gene721;Name=YP_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03620;old_locus_tag=YP0699%2CYP_0699 NC_005810.1 Protein Homology CDS 757729 758724 . + 0 ID=cds697;Parent=gene721;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11 NC_005810.1 RefSeq gene 758737 758964 . + . ID=gene722;Name=YP_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03625;old_locus_tag=YP0700%2CYP_0700 NC_005810.1 Protein Homology CDS 758737 758964 . + 0 ID=cds698;Parent=gene722;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11 NC_005810.1 RefSeq gene 759208 760155 . - . ID=gene723;Name=YP_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03630;old_locus_tag=YP0701%2CYP_0701 NC_005810.1 Protein Homology CDS 759208 760155 . - 0 ID=cds699;Parent=gene723;Dbxref=Genbank:WP_002208709.1;Name=WP_002208709.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002208709.1;transl_table=11 NC_005810.1 RefSeq gene 760511 761569 . + . ID=gene724;Name=YP_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03635;old_locus_tag=YP0702%2CYP_0702 NC_005810.1 Protein Homology CDS 760511 761569 . + 0 ID=cds700;Parent=gene724;Dbxref=Genbank:WP_002208708.1;Name=WP_002208708.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_002208708.1;transl_table=11 NC_005810.1 RefSeq gene 761683 763143 . - . ID=gene725;Name=YP_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03640;old_locus_tag=YP0703%2CYP_0703 NC_005810.1 Protein Homology CDS 761683 763143 . - 0 ID=cds701;Parent=gene725;Dbxref=Genbank:WP_002208707.1;Name=WP_002208707.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_002208707.1;transl_table=11 NC_005810.1 RefSeq repeat_region 763402 763437 . + . ID=id150;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 764141 764296 . + . ID=gene726;Name=YP_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03645;old_locus_tag=YP0704%2CYP_0704 NC_005810.1 Protein Homology CDS 764141 764296 . + 0 ID=cds702;Parent=gene726;Dbxref=Genbank:WP_002216045.1;Name=WP_002216045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216045.1;transl_table=11 NC_005810.1 RefSeq gene 765144 765929 . + . ID=gene727;Name=YP_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03650;old_locus_tag=YP0705%2CYP_0705 NC_005810.1 Protein Homology CDS 765144 765929 . + 0 ID=cds703;Parent=gene727;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11 NC_005810.1 RefSeq gene 766389 767993 . - . ID=gene728;Name=YP_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03655;old_locus_tag=YP0706%2CYP_0706 NC_005810.1 Protein Homology CDS 766389 767993 . - 0 ID=cds704;Parent=gene728;Dbxref=Genbank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;product=chitin-binding domain protein;protein_id=WP_002208705.1;transl_table=11 NC_005810.1 RefSeq gene 768190 768495 . - . ID=gene729;Name=YP_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03660;old_locus_tag=YP0707%2CYP_0707 NC_005810.1 Protein Homology CDS 768190 768495 . - 0 ID=cds705;Parent=gene729;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11 NC_005810.1 RefSeq gene 768922 769380 . + . ID=gene730;Name=YP_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03665;old_locus_tag=YP0708%2CYP_0708 NC_005810.1 Protein Homology CDS 768922 769380 . + 0 ID=cds706;Parent=gene730;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NC_005810.1 RefSeq gene 769507 770754 . + . ID=gene731;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YP_RS03670;old_locus_tag=YP0709%2CYP_0709 NC_005810.1 Protein Homology CDS 769507 770754 . + 0 ID=cds707;Parent=gene731;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11 NC_005810.1 RefSeq gene 770814 771215 . + . ID=gene732;Name=YP_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03675;old_locus_tag=YP0710%2CYP_0710 NC_005810.1 Protein Homology CDS 770814 771215 . + 0 ID=cds708;Parent=gene732;Dbxref=Genbank:WP_002208702.1;Name=WP_002208702.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NC_005810.1 RefSeq gene 771392 772495 . + . ID=gene733;Name=YP_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03680;old_locus_tag=YP0711%2CYP_0711 NC_005810.1 Protein Homology CDS 771392 772495 . + 0 ID=cds709;Parent=gene733;Dbxref=Genbank:WP_002208701.1;Name=WP_002208701.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NC_005810.1 RefSeq gene 772505 773764 . + . ID=gene734;Name=YP_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03685;old_locus_tag=YP0712%2CYP_0712 NC_005810.1 Protein Homology CDS 772505 773764 . + 0 ID=cds710;Parent=gene734;Dbxref=Genbank:WP_002208700.1;Name=WP_002208700.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_002208700.1;transl_table=11 NC_005810.1 RefSeq gene 774101 774850 . + . ID=gene735;Name=YP_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03690;old_locus_tag=YP0714%2CYP_0714 NC_005810.1 Protein Homology CDS 774101 774850 . + 0 ID=cds711;Parent=gene735;Dbxref=Genbank:WP_002264519.1;Name=WP_002264519.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_002264519.1;transl_table=11 NC_005810.1 RefSeq gene 775048 775302 . + . ID=gene736;Name=YP_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03695;old_locus_tag=YP0715%2CYP_0715 NC_005810.1 Protein Homology CDS 775048 775302 . + 0 ID=cds712;Parent=gene736;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11 NC_005810.1 RefSeq gene 775506 776069 . + . ID=gene737;Name=YP_RS03700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS03700;old_locus_tag=YP0717%2CYP_0717;partial=true;pseudo=true;start_range=.,775506 NC_005810.1 Protein Homology CDS 775506 776069 . + 0 ID=cds713;Parent=gene737;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,775506;transl_table=11 NC_005810.1 RefSeq gene 776316 776531 . - . ID=gene738;Name=YP_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03705;old_locus_tag=YP0718%2CYP_0718 NC_005810.1 Protein Homology CDS 776316 776531 . - 0 ID=cds714;Parent=gene738;Dbxref=Genbank:WP_002215536.1;Name=WP_002215536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215536.1;transl_table=11 NC_005810.1 RefSeq gene 776799 777356 . + . ID=gene739;Name=YP_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03710;old_locus_tag=YP0719%2CYP_0719 NC_005810.1 Protein Homology CDS 776799 777356 . + 0 ID=cds715;Parent=gene739;Dbxref=Genbank:WP_002208694.1;Name=WP_002208694.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208694.1;transl_table=11 NC_005810.1 RefSeq gene 777603 778127 . + . ID=gene740;Name=YP_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03715;old_locus_tag=YP0720%2CYP_0720 NC_005810.1 Protein Homology CDS 777603 778127 . + 0 ID=cds716;Parent=gene740;Dbxref=Genbank:WP_002208693.1;Name=WP_002208693.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_002208693.1;transl_table=11 NC_005810.1 RefSeq gene 778383 778553 . + . ID=gene741;Name=YP_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03720;old_locus_tag=YP0721%2CYP_0721 NC_005810.1 Protein Homology CDS 778383 778553 . + 0 ID=cds717;Parent=gene741;Dbxref=Genbank:WP_002215533.1;Name=WP_002215533.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215533.1;transl_table=11 NC_005810.1 RefSeq gene 778617 778904 . + . ID=gene742;Name=YP_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03725;old_locus_tag=YP0722%2CYP_0722 NC_005810.1 Protein Homology CDS 778617 778904 . + 0 ID=cds718;Parent=gene742;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11 NC_005810.1 RefSeq gene 779140 780051 . - . ID=gene743;Name=YP_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03730;old_locus_tag=YP0723%2CYP_0723 NC_005810.1 Protein Homology CDS 779140 780051 . - 0 ID=cds719;Parent=gene743;Dbxref=Genbank:WP_002208691.1;Name=WP_002208691.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NC_005810.1 RefSeq gene 780384 781298 . + . ID=gene744;Name=YP_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03735;old_locus_tag=YP0724%2CYP_0724 NC_005810.1 Protein Homology CDS 780384 781298 . + 0 ID=cds720;Parent=gene744;Dbxref=Genbank:WP_002208690.1;Name=WP_002208690.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_002208690.1;transl_table=11 NC_005810.1 RefSeq repeat_region 781374 781639 . + . ID=id151;Note=degenerate repeat region containing 2 copies of a 133bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 781374 781498 . + . ID=id152;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 781507 781631 . + . ID=id153;gbkey=repeat_region NC_005810.1 RefSeq gene 781759 785448 . - . ID=gene745;Name=YP_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03740;old_locus_tag=YP0725%2CYP_0725 NC_005810.1 Protein Homology CDS 781759 785448 . - 0 ID=cds721;Parent=gene745;Dbxref=Genbank:WP_002223265.1;Name=WP_002223265.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_002223265.1;transl_table=11 NC_005810.1 RefSeq gene 785445 786689 . - . ID=gene746;Name=YP_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03745;old_locus_tag=YP0726%2CYP_0726 NC_005810.1 Protein Homology CDS 785445 786689 . - 0 ID=cds722;Parent=gene746;Dbxref=Genbank:WP_002208687.1;Name=WP_002208687.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease SbcD;protein_id=WP_002208687.1;transl_table=11 NC_005810.1 RefSeq gene 786808 786927 . + . ID=gene747;Name=YP_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03750 NC_005810.1 Protein Homology CDS 786808 786927 . + 0 ID=cds723;Parent=gene747;Dbxref=Genbank:WP_002208686.1;Name=WP_002208686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208686.1;transl_table=11 NC_005810.1 RefSeq gene 786957 787646 . + . ID=gene748;Name=YP_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03755;old_locus_tag=YP0727%2CYP_0727 NC_005810.1 Protein Homology CDS 786957 787646 . + 0 ID=cds724;Parent=gene748;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11 NC_005810.1 RefSeq gene 787671 788987 . + . ID=gene749;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YP_RS03760;old_locus_tag=YP0728%2CYP_0728 NC_005810.1 Protein Homology CDS 787671 788987 . + 0 ID=cds725;Parent=gene749;Dbxref=Genbank:WP_002208684.1;Name=WP_002208684.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_002208684.1;transl_table=11 NC_005810.1 RefSeq gene 789009 790073 . + . ID=gene750;Name=YP_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03765;old_locus_tag=YP0729%2CYP_0729 NC_005810.1 Protein Homology CDS 789009 790073 . + 0 ID=cds726;Parent=gene750;Dbxref=Genbank:WP_002215524.1;Name=WP_002215524.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215524.1;transl_table=11 NC_005810.1 RefSeq repeat_region 789094 789129 . + . ID=id154;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 790547 791866 . + . ID=gene751;Name=YP_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03770;old_locus_tag=YP0730%2CYP_0730 NC_005810.1 Protein Homology CDS 790547 791866 . + 0 ID=cds727;Parent=gene751;Dbxref=Genbank:WP_002208680.1;Name=WP_002208680.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_002208680.1;transl_table=11 NC_005810.1 RefSeq gene 791942 793333 . + . ID=gene752;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YP_RS03775;old_locus_tag=YP0731%2CYP_0731 NC_005810.1 Protein Homology CDS 791942 793333 . + 0 ID=cds728;Parent=gene752;Dbxref=Genbank:WP_002223269.1;Name=WP_002223269.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002223269.1;transl_table=11 NC_005810.1 RefSeq repeat_region 793701 793734 . + . ID=id155;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 793894 795723 . + . ID=gene753;Name=YP_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03780;old_locus_tag=YP0732%2CYP_0732 NC_005810.1 Protein Homology CDS 793894 795723 . + 0 ID=cds729;Parent=gene753;Dbxref=Genbank:WP_002208678.1;Name=WP_002208678.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_002208678.1;transl_table=11 NC_005810.1 RefSeq gene 795878 796558 . + . ID=gene754;Name=YP_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03785;old_locus_tag=YP0733%2CYP_0733 NC_005810.1 Protein Homology CDS 795878 796558 . + 0 ID=cds730;Parent=gene754;Dbxref=Genbank:WP_002208677.1;Name=WP_002208677.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002208677.1;transl_table=11 NC_005810.1 RefSeq gene 796766 798280 . - . ID=gene755;Name=YP_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03790;old_locus_tag=YP0734 NC_005810.1 Protein Homology CDS 796766 798280 . - 0 ID=cds731;Parent=gene755;Dbxref=Genbank:WP_002231089.1;Name=WP_002231089.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_002231089.1;transl_table=11 NC_005810.1 RefSeq gene 798240 798530 . - . ID=gene756;Name=YP_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03795 NC_005810.1 Protein Homology CDS 798240 798530 . - 0 ID=cds732;Parent=gene756;Dbxref=Genbank:WP_002232170.1;Name=WP_002232170.1;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=WP_002232170.1;transl_table=11 NC_005810.1 RefSeq repeat_region 798621 798654 . + . ID=id156;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 798699 798830 . + . ID=gene757;Name=YP_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03800;old_locus_tag=YP0736%2CYP_0736 NC_005810.1 Protein Homology CDS 798699 798830 . + 0 ID=cds733;Parent=gene757;Dbxref=Genbank:WP_002216930.1;Name=WP_002216930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216930.1;transl_table=11 NC_005810.1 RefSeq gene 798919 799521 . - . ID=gene758;Name=YP_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03805;old_locus_tag=YP0737%2CYP_0737 NC_005810.1 Protein Homology CDS 798919 799521 . - 0 ID=cds734;Parent=gene758;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11 NC_005810.1 RefSeq repeat_region 799714 799813 . + . ID=id157;Note=degenerate repeat region containing 5 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 799840 800421 . - . ID=gene759;Name=YP_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03810;old_locus_tag=YP0738%2CYP_0738 NC_005810.1 Protein Homology CDS 799840 800421 . - 0 ID=cds735;Parent=gene759;Dbxref=Genbank:WP_002216927.1;Name=WP_002216927.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_002216927.1;transl_table=11 NC_005810.1 RefSeq gene 800624 801694 . + . ID=gene760;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YP_RS03815;old_locus_tag=YP0739%2CYP_0739 NC_005810.1 Protein Homology CDS 800624 801694 . + 0 ID=cds736;Parent=gene760;Dbxref=Genbank:WP_002208673.1;Name=WP_002208673.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_002208673.1;transl_table=11 NC_005810.1 RefSeq gene 801787 802911 . + . ID=gene761;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YP_RS03820;old_locus_tag=YP0740%2CYP_0740 NC_005810.1 Protein Homology CDS 801787 802911 . + 0 ID=cds737;Parent=gene761;Dbxref=Genbank:WP_002208672.1;Name=WP_002208672.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_002208672.1;transl_table=11 NC_005810.1 RefSeq gene 803023 803358 . + . ID=gene762;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YP_RS03825;old_locus_tag=YP0741%2CYP_0741 NC_005810.1 Protein Homology CDS 803023 803358 . + 0 ID=cds738;Parent=gene762;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NC_005810.1 RefSeq gene 803419 805233 . + . ID=gene763;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YP_RS03830;old_locus_tag=YP0742%2CYP_0742 NC_005810.1 Protein Homology CDS 803419 805233 . + 0 ID=cds739;Parent=gene763;Dbxref=Genbank:WP_002354695.1;Name=WP_002354695.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_002354695.1;transl_table=11 NC_005810.1 RefSeq gene 805244 806212 . + . ID=gene764;Name=YP_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03835;old_locus_tag=YP0743%2CYP_0743 NC_005810.1 Protein Homology CDS 805244 806212 . + 0 ID=cds740;Parent=gene764;Dbxref=Genbank:WP_002208669.1;Name=WP_002208669.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NC_005810.1 RefSeq repeat_region 806269 806990 . + . ID=id158;gbkey=repeat_region NC_005810.1 RefSeq region 806274 806985 . + . ID=id159;gbkey=mobile_element NC_005810.1 RefSeq gene 806419 806877 . + . ID=gene765;Name=YP_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03840;old_locus_tag=YP0744%2CYP_0744 NC_005810.1 Protein Homology CDS 806419 806877 . + 0 ID=cds741;Parent=gene765;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 807175 807870 . + . ID=gene766;Name=YP_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03845;old_locus_tag=YP0745%2CYP_0745 NC_005810.1 Protein Homology CDS 807175 807870 . + 0 ID=cds742;Parent=gene766;Dbxref=Genbank:WP_002217139.1;Name=WP_002217139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217139.1;transl_table=11 NC_005810.1 RefSeq gene 807903 808496 . + . ID=gene767;Name=YP_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03850;old_locus_tag=YP0746%2CYP_0746 NC_005810.1 Protein Homology CDS 807903 808496 . + 0 ID=cds743;Parent=gene767;Dbxref=Genbank:WP_002217141.1;Name=WP_002217141.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217141.1;transl_table=11 NC_005810.1 RefSeq gene 808567 809016 . + . ID=gene768;Name=YP_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03855;old_locus_tag=YP0747%2CYP_0747 NC_005810.1 Protein Homology CDS 808567 809016 . + 0 ID=cds744;Parent=gene768;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11 NC_005810.1 RefSeq gene 809166 810275 . + . ID=gene769;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YP_RS03860;old_locus_tag=YP0748%2CYP_0748 NC_005810.1 Protein Homology CDS 809166 810275 . + 0 ID=cds745;Parent=gene769;Dbxref=Genbank:WP_002208667.1;Name=WP_002208667.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_002208667.1;transl_table=11 NC_005810.1 RefSeq gene 810411 810881 . + . ID=gene770;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YP_RS03865;old_locus_tag=YP0749%2CYP_0749 NC_005810.1 Protein Homology CDS 810411 810881 . + 0 ID=cds746;Parent=gene770;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NC_005810.1 RefSeq gene 810902 811318 . + . ID=gene771;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YP_RS03870;old_locus_tag=YP0750%2CYP_0750 NC_005810.1 Protein Homology CDS 810902 811318 . + 0 ID=cds747;Parent=gene771;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11 NC_005810.1 RefSeq gene 811559 812548 . + . ID=gene772;Name=YP_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03875;old_locus_tag=YP0751%2CYP_0751 NC_005810.1 Protein Homology CDS 811559 812548 . + 0 ID=cds748;Parent=gene772;Dbxref=Genbank:WP_002208664.1;Name=WP_002208664.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_002208664.1;transl_table=11 NC_005810.1 RefSeq gene 812541 813026 . + . ID=gene773;Name=YP_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03880;old_locus_tag=YP0752%2CYP_0752 NC_005810.1 Protein Homology CDS 812541 813026 . + 0 ID=cds749;Parent=gene773;Dbxref=Genbank:WP_002208663.1;Name=WP_002208663.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NC_005810.1 RefSeq gene 813086 813250 . + . ID=gene774;Name=YP_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03885 NC_005810.1 Protein Homology CDS 813086 813250 . + 0 ID=cds750;Parent=gene774;Dbxref=Genbank:WP_002217353.1;Name=WP_002217353.1;gbkey=CDS;product=invasin;protein_id=WP_002217353.1;transl_table=11 NC_005810.1 RefSeq repeat_region 813088 813809 . + . ID=id160;gbkey=repeat_region NC_005810.1 RefSeq region 813095 813806 . + . ID=id161;gbkey=mobile_element NC_005810.1 RefSeq gene 813240 813698 . + . ID=gene775;Name=YP_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03890;old_locus_tag=YP0753%2CYP_0753 NC_005810.1 Protein Homology CDS 813240 813698 . + 0 ID=cds751;Parent=gene775;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 813877 815736 . - . ID=gene776;Name=YP_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03895;old_locus_tag=YP0754%2CYP_0754 NC_005810.1 Protein Homology CDS 813877 815736 . - 0 ID=cds752;Parent=gene776;Dbxref=Genbank:WP_002208662.1;Name=WP_002208662.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_002208662.1;transl_table=11 NC_005810.1 RefSeq gene 815892 816812 . - . ID=gene777;Name=YP_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03900;old_locus_tag=YP0755%2CYP_0755 NC_005810.1 Protein Homology CDS 815892 816812 . - 0 ID=cds753;Parent=gene777;Dbxref=Genbank:WP_002208661.1;Name=WP_002208661.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_002208661.1;transl_table=11 NC_005810.1 RefSeq gene 816817 817071 . - . ID=gene778;Name=YP_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03905;old_locus_tag=YP0756%2CYP_0756 NC_005810.1 Protein Homology CDS 816817 817071 . - 0 ID=cds754;Parent=gene778;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11 NC_005810.1 RefSeq gene 817153 817323 . + . ID=gene779;Name=YP_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03910;old_locus_tag=YP0757%2CYP_0757 NC_005810.1 Protein Homology CDS 817153 817323 . + 0 ID=cds755;Parent=gene779;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11 NC_005810.1 RefSeq gene 817421 818872 . + . ID=gene780;Name=YP_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03915;old_locus_tag=YP0758%2CYP_0758 NC_005810.1 Protein Homology CDS 817421 818872 . + 0 ID=cds756;Parent=gene780;Dbxref=Genbank:WP_002208658.1;Name=WP_002208658.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_002208658.1;transl_table=11 NC_005810.1 RefSeq gene 818940 819530 . - . ID=gene781;Name=YP_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03920;old_locus_tag=YP0759%2CYP_0759 NC_005810.1 Protein Homology CDS 818940 819530 . - 0 ID=cds757;Parent=gene781;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11 NC_005810.1 RefSeq gene 819493 820404 . - . ID=gene782;Name=YP_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03925;old_locus_tag=YP0760%2CYP_0760 NC_005810.1 Protein Homology CDS 819493 820404 . - 0 ID=cds758;Parent=gene782;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NC_005810.1 RefSeq gene 820636 821127 . + . ID=gene783;Name=YP_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03930;old_locus_tag=YP0761%2CYP_0761 NC_005810.1 Protein Homology CDS 820636 821127 . + 0 ID=cds759;Parent=gene783;Dbxref=Genbank:WP_002208655.1;Name=WP_002208655.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_002208655.1;transl_table=11 NC_005810.1 RefSeq gene 821251 822615 . - . ID=gene784;Name=YP_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03935;old_locus_tag=YP0762%2CYP_0762 NC_005810.1 Protein Homology CDS 821251 822615 . - 0 ID=cds760;Parent=gene784;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11 NC_005810.1 RefSeq gene 823099 823986 . - . ID=gene785;Name=YP_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03940;old_locus_tag=YP0763%2CYP_0763 NC_005810.1 Protein Homology CDS 823099 823986 . - 0 ID=cds761;Parent=gene785;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11 NC_005810.1 RefSeq gene 824000 824332 . - . ID=gene786;Name=YP_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03945;old_locus_tag=YP0764%2CYP_0764 NC_005810.1 Protein Homology CDS 824000 824332 . - 0 ID=cds762;Parent=gene786;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11 NC_005810.1 RefSeq gene 824332 824946 . - . ID=gene787;Name=YP_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03950;old_locus_tag=YP0765%2CYP_0765 NC_005810.1 Protein Homology CDS 824332 824946 . - 0 ID=cds763;Parent=gene787;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11 NC_005810.1 RefSeq gene 824936 826927 . - . ID=gene788;Name=YP_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03955;old_locus_tag=YP0766%2CYP_0766 NC_005810.1 Protein Homology CDS 824936 826927 . - 0 ID=cds764;Parent=gene788;Dbxref=Genbank:WP_002208650.1;Name=WP_002208650.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NC_005810.1 RefSeq gene 826932 827888 . - . ID=gene789;Name=YP_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03960;old_locus_tag=YP0767%2CYP_0767 NC_005810.1 Protein Homology CDS 826932 827888 . - 0 ID=cds765;Parent=gene789;Dbxref=Genbank:WP_002208649.1;Name=WP_002208649.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208649.1;transl_table=11 NC_005810.1 RefSeq gene 828258 829025 . - . ID=gene790;Name=YP_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03965;old_locus_tag=YP0768%2CYP_0768 NC_005810.1 Protein Homology CDS 828258 829025 . - 0 ID=cds766;Parent=gene790;Dbxref=Genbank:WP_002208648.1;Name=WP_002208648.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_002208648.1;transl_table=11 NC_005810.1 RefSeq gene 829317 830795 . - . ID=gene791;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YP_RS03970;old_locus_tag=YP0769%2CYP_0769 NC_005810.1 Protein Homology CDS 829317 830795 . - 0 ID=cds767;Parent=gene791;Dbxref=Genbank:WP_002223277.1;Name=WP_002223277.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_002223277.1;transl_table=11 NC_005810.1 RefSeq gene 830913 831491 . - . ID=gene792;Name=YP_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03975;old_locus_tag=YP0770%2CYP_0770 NC_005810.1 Protein Homology CDS 830913 831491 . - 0 ID=cds768;Parent=gene792;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11 NC_005810.1 RefSeq gene 831846 832160 . + . ID=gene793;Name=YP_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03980;old_locus_tag=YP0771%2CYP_0771 NC_005810.1 Protein Homology CDS 831846 832160 . + 0 ID=cds769;Parent=gene793;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11 NC_005810.1 RefSeq gene 832319 832504 . + . ID=gene794;Name=YP_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03985;old_locus_tag=YP0772%2CYP_0772 NC_005810.1 Protein Homology CDS 832319 832504 . + 0 ID=cds770;Parent=gene794;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11 NC_005810.1 RefSeq gene 832577 833881 . + . ID=gene795;Name=YP_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03990;old_locus_tag=YP0773%2CYP_0773 NC_005810.1 Protein Homology CDS 832577 833881 . + 0 ID=cds771;Parent=gene795;Dbxref=Genbank:WP_002208643.1;Name=WP_002208643.1;gbkey=CDS;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NC_005810.1 RefSeq gene 834343 834966 . + . ID=gene796;Name=YP_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS03995;old_locus_tag=YP0774%2CYP_0774 NC_005810.1 Protein Homology CDS 834343 834966 . + 0 ID=cds772;Parent=gene796;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11 NC_005810.1 RefSeq gene 835172 836443 . + . ID=gene797;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YP_RS04000;old_locus_tag=YP0775%2CYP_0775 NC_005810.1 Protein Homology CDS 835172 836443 . + 0 ID=cds773;Parent=gene797;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NC_005810.1 RefSeq gene 836638 838992 . + . ID=gene798;Name=YP_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04005;old_locus_tag=YP0776%2CYP_0776 NC_005810.1 Protein Homology CDS 836638 838992 . + 0 ID=cds774;Parent=gene798;Dbxref=Genbank:WP_002208640.1;Name=WP_002208640.1;gbkey=CDS;product=peptidase;protein_id=WP_002208640.1;transl_table=11 NC_005810.1 RefSeq gene 839210 839482 . + . ID=gene799;Name=YP_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04010;old_locus_tag=YP0777%2CYP_0777 NC_005810.1 Protein Homology CDS 839210 839482 . + 0 ID=cds775;Parent=gene799;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11 NC_005810.1 RefSeq gene 839783 841669 . + . ID=gene800;Name=YP_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04015;old_locus_tag=YP0778%2CYP_0778 NC_005810.1 Protein Homology CDS 839783 841669 . + 0 ID=cds776;Parent=gene800;Dbxref=Genbank:WP_002208638.1;Name=WP_002208638.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208638.1;transl_table=11 NC_005810.1 RefSeq gene 841809 842255 . + . ID=gene801;Name=YP_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04020;old_locus_tag=YP0779%2CYP_0779 NC_005810.1 Protein Homology CDS 841809 842255 . + 0 ID=cds777;Parent=gene801;Dbxref=Genbank:WP_002208637.1;Name=WP_002208637.1;gbkey=CDS;product=transporter;protein_id=WP_002208637.1;transl_table=11 NC_005810.1 RefSeq repeat_region 842310 842349 . + . ID=id162;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 842609 843016 . + . ID=gene802;Name=YP_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04025;old_locus_tag=YP0780%2CYP_0780 NC_005810.1 Protein Homology CDS 842609 843016 . + 0 ID=cds778;Parent=gene802;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11 NC_005810.1 RefSeq gene 843102 843800 . - . ID=gene803;Name=YP_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04030;old_locus_tag=YP0781%2CYP_0781 NC_005810.1 Protein Homology CDS 843102 843800 . - 0 ID=cds779;Parent=gene803;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11 NC_005810.1 RefSeq gene 844065 845768 . - . ID=gene804;Name=YP_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04035;old_locus_tag=YP0782%2CYP_0782 NC_005810.1 Protein Homology CDS 844065 845768 . - 0 ID=cds780;Parent=gene804;Dbxref=Genbank:WP_002208633.1;Name=WP_002208633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208633.1;transl_table=11 NC_005810.1 RefSeq gene 845873 846694 . + . ID=gene805;Name=YP_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04040;old_locus_tag=YP0783%2CYP_0783 NC_005810.1 Protein Homology CDS 845873 846694 . + 0 ID=cds781;Parent=gene805;Dbxref=Genbank:WP_002208632.1;Name=WP_002208632.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_002208632.1;transl_table=11 NC_005810.1 RefSeq gene 846906 847946 . - . ID=gene806;Name=YP_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04045;old_locus_tag=YP0784%2CYP_0784 NC_005810.1 Protein Homology CDS 846906 847946 . - 0 ID=cds782;Parent=gene806;Dbxref=Genbank:WP_002208631.1;Name=WP_002208631.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_002208631.1;transl_table=11 NC_005810.1 RefSeq gene 848072 848533 . + . ID=gene807;Name=YP_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04050;old_locus_tag=YP0785%2CYP_0785 NC_005810.1 Protein Homology CDS 848072 848533 . + 0 ID=cds783;Parent=gene807;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NC_005810.1 RefSeq gene 848635 850401 . + . ID=gene808;Name=YP_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04055;old_locus_tag=YP0786%2CYP_0786 NC_005810.1 Protein Homology CDS 848635 850401 . + 0 ID=cds784;Parent=gene808;Dbxref=Genbank:WP_002208629.1;Name=WP_002208629.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208629.1;transl_table=11 NC_005810.1 RefSeq gene 850394 852217 . + . ID=gene809;Name=YP_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04060;old_locus_tag=YP0787%2CYP_0787 NC_005810.1 Protein Homology CDS 850394 852217 . + 0 ID=cds785;Parent=gene809;Dbxref=Genbank:WP_002208628.1;Name=WP_002208628.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208628.1;transl_table=11 NC_005810.1 RefSeq gene 852627 852917 . + . ID=gene810;Name=YP_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04065;old_locus_tag=YP0788%2CYP_0788 NC_005810.1 Protein Homology CDS 852627 852917 . + 0 ID=cds786;Parent=gene810;Dbxref=Genbank:WP_042659203.1;Name=WP_042659203.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 1;protein_id=WP_042659203.1;transl_table=11 NC_005810.1 RefSeq gene 853005 854294 . + . ID=gene811;Name=YP_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04070;old_locus_tag=YP0789%2CYP_0789 NC_005810.1 Protein Homology CDS 853005 854294 . + 0 ID=cds787;Parent=gene811;Dbxref=Genbank:WP_002228344.1;Name=WP_002228344.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_002228344.1;transl_table=11 NC_005810.1 RefSeq gene 854554 855414 . - . ID=gene812;Name=YP_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04075;old_locus_tag=YP0790%2CYP_0790 NC_005810.1 Protein Homology CDS 854554 855414 . - 0 ID=cds788;Parent=gene812;Dbxref=Genbank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_002208625.1;transl_table=11 NC_005810.1 RefSeq gene 855671 856192 . + . ID=gene813;Name=YP_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04080;old_locus_tag=YP0791%2CYP_0791 NC_005810.1 Protein Homology CDS 855671 856192 . + 0 ID=cds789;Parent=gene813;Dbxref=Genbank:WP_002208624.1;Name=WP_002208624.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002208624.1;transl_table=11 NC_005810.1 RefSeq gene 856328 856717 . - . ID=gene814;Name=YP_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04085;old_locus_tag=YP0792 NC_005810.1 Protein Homology CDS 856328 856717 . - 0 ID=cds790;Parent=gene814;Dbxref=Genbank:WP_002208623.1;Name=WP_002208623.1;gbkey=CDS;product=6-O-methylguanine DNA methyltransferase;protein_id=WP_002208623.1;transl_table=11 NC_005810.1 RefSeq repeat_region 856753 856788 . + . ID=id163;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 857605 857808 . - . ID=gene815;Name=YP_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04090;old_locus_tag=YP0793%2CYP_0793 NC_005810.1 Protein Homology CDS 857605 857808 . - 0 ID=cds791;Parent=gene815;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NC_005810.1 RefSeq gene 857857 858225 . - . ID=gene816;Name=YP_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04095;old_locus_tag=YP0794%2CYP_0794 NC_005810.1 Protein Homology CDS 857857 858225 . - 0 ID=cds792;Parent=gene816;Dbxref=Genbank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218472.1;transl_table=11 NC_005810.1 RefSeq gene 858384 858737 . - . ID=gene817;Name=YP_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04100;old_locus_tag=YP0795%2CYP_0795 NC_005810.1 Protein Homology CDS 858384 858737 . - 0 ID=cds793;Parent=gene817;Dbxref=Genbank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11 NC_005810.1 RefSeq gene 859611 859754 . - . ID=gene818;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YP_RS04105;old_locus_tag=YP0796%2CYP_0796 NC_005810.1 Protein Homology CDS 859611 859754 . - 0 ID=cds794;Parent=gene818;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NC_005810.1 RefSeq gene 859770 860030 . - . ID=gene819;Name=YP_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04110;old_locus_tag=YP0797%2CYP_0797 NC_005810.1 Protein Homology CDS 859770 860030 . - 0 ID=cds795;Parent=gene819;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 860046 860064 . - . ID=id164;Dbxref=CollecTF:EXPSITE_0000c6f0;Note=Transcription factor binding site for NP_991864. Originally reported in Yersinia pestis biovar microtus strain 201~Evidence of regulation for: YP_0796;gbkey=protein_bind NC_005810.1 RefSeq gene 860216 863368 . - . ID=gene820;Name=YP_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04115;old_locus_tag=YP0798%2CYP_0798 NC_005810.1 Protein Homology CDS 860216 863368 . - 0 ID=cds796;Parent=gene820;Dbxref=Genbank:WP_002208616.1;Name=WP_002208616.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002208616.1;transl_table=11 NC_005810.1 RefSeq gene 863385 864572 . - . ID=gene821;Name=YP_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04120;old_locus_tag=YP0799%2CYP_0799 NC_005810.1 Protein Homology CDS 863385 864572 . - 0 ID=cds797;Parent=gene821;Dbxref=Genbank:WP_002208615.1;Name=WP_002208615.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_002208615.1;transl_table=11 NC_005810.1 RefSeq gene 864717 865373 . + . ID=gene822;Name=YP_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04125;old_locus_tag=YP0800%2CYP_0800 NC_005810.1 Protein Homology CDS 864717 865373 . + 0 ID=cds798;Parent=gene822;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11 NC_005810.1 RefSeq gene 865386 865739 . + . ID=gene823;Name=YP_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04130;old_locus_tag=YP0801%2CYP_0801 NC_005810.1 Protein Homology CDS 865386 865739 . + 0 ID=cds799;Parent=gene823;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11 NC_005810.1 RefSeq gene 866035 869397 . + . ID=gene824;Name=YP_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04135;old_locus_tag=YP0802%2CYP_0802 NC_005810.1 Protein Homology CDS 866035 869397 . + 0 ID=cds800;Parent=gene824;Dbxref=Genbank:WP_002208612.1;Name=WP_002208612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208612.1;transl_table=11 NC_005810.1 RefSeq repeat_region 869458 869559 . + . ID=id165;Note=degenerate repeat region containing 3 copies of a 34bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 869771 869926 . - . ID=gene825;Name=YP_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04140;old_locus_tag=YP0803%2CYP_0803 NC_005810.1 Protein Homology CDS 869771 869926 . - 0 ID=cds801;Parent=gene825;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11 NC_005810.1 RefSeq gene 870097 870633 . - . ID=gene826;Name=YP_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04145;old_locus_tag=YP0804%2CYP_0804 NC_005810.1 Protein Homology CDS 870097 870633 . - 0 ID=cds802;Parent=gene826;Dbxref=Genbank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_002208610.1;transl_table=11 NC_005810.1 RefSeq repeat_region 870737 870762 . + . ID=id166;Note=exact repeat region containing 2 copies of a 13 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 870832 871020 . - . ID=gene827;Name=YP_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04150 NC_005810.1 Protein Homology CDS 870832 871020 . - 0 ID=cds803;Parent=gene827;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11 NC_005810.1 RefSeq gene 871453 872016 . + . ID=gene828;Name=YP_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04155;old_locus_tag=YP0806%2CYP_0806 NC_005810.1 Protein Homology CDS 871453 872016 . + 0 ID=cds804;Parent=gene828;Dbxref=Genbank:WP_002208606.1;Name=WP_002208606.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002208606.1;transl_table=11 NC_005810.1 RefSeq gene 872672 874648 . + . ID=gene829;Name=YP_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04160;old_locus_tag=YP0807%2CYP_0807 NC_005810.1 Protein Homology CDS 872672 874648 . + 0 ID=cds805;Parent=gene829;Dbxref=Genbank:WP_002208605.1;Name=WP_002208605.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NC_005810.1 RefSeq gene 874704 875036 . + . ID=gene830;Name=YP_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04165;old_locus_tag=YP0808%2CYP_0808 NC_005810.1 Protein Homology CDS 874704 875036 . + 0 ID=cds806;Parent=gene830;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11 NC_005810.1 RefSeq gene 875036 875641 . + . ID=gene831;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YP_RS04170;old_locus_tag=YP0809%2CYP_0809 NC_005810.1 Protein Homology CDS 875036 875641 . + 0 ID=cds807;Parent=gene831;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11 NC_005810.1 RefSeq gene 875833 877707 . + . ID=gene832;Name=YP_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04175;old_locus_tag=YP0811%2CYP_0811 NC_005810.1 Protein Homology CDS 875833 877707 . + 0 ID=cds808;Parent=gene832;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11 NC_005810.1 RefSeq gene 877934 878578 . + . ID=gene833;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YP_RS04180;old_locus_tag=YP0812%2CYP_0812 NC_005810.1 Protein Homology CDS 877934 878578 . + 0 ID=cds809;Parent=gene833;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NC_005810.1 RefSeq gene 878668 879630 . + . ID=gene834;Name=YP_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04185;old_locus_tag=YP0813%2CYP_0813 NC_005810.1 Protein Homology CDS 878668 879630 . + 0 ID=cds810;Parent=gene834;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NC_005810.1 RefSeq gene 880228 881217 . + . ID=gene835;Name=YP_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04190;old_locus_tag=YP0814%2CYP_0814 NC_005810.1 Protein Homology CDS 880228 881217 . + 0 ID=cds811;Parent=gene835;Dbxref=Genbank:WP_002208598.1;Name=WP_002208598.1;gbkey=CDS;product=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase;protein_id=WP_002208598.1;transl_table=11 NC_005810.1 RefSeq gene 881255 882028 . + . ID=gene836;Name=YP_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04195;old_locus_tag=YP0815%2CYP_0815 NC_005810.1 Protein Homology CDS 881255 882028 . + 0 ID=cds812;Parent=gene836;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NC_005810.1 RefSeq gene 882207 883106 . + . ID=gene837;Name=YP_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04200;old_locus_tag=YP0816 NC_005810.1 Protein Homology CDS 882207 883106 . + 0 ID=cds813;Parent=gene837;Dbxref=Genbank:WP_002354671.1;Name=WP_002354671.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11 NC_005810.1 RefSeq gene 883124 884437 . + . ID=gene838;Name=YP_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04205;old_locus_tag=YP0817%2CYP_0817 NC_005810.1 Protein Homology CDS 883124 884437 . + 0 ID=cds814;Parent=gene838;Dbxref=Genbank:WP_002208596.1;Name=WP_002208596.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208596.1;transl_table=11 NC_005810.1 RefSeq gene 884474 885331 . + . ID=gene839;Name=YP_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04210;old_locus_tag=YP0818%2CYP_0818 NC_005810.1 Protein Homology CDS 884474 885331 . + 0 ID=cds815;Parent=gene839;Dbxref=Genbank:WP_002208595.1;Name=WP_002208595.1;gbkey=CDS;product=paratose synthase;protein_id=WP_002208595.1;transl_table=11 NC_005810.1 RefSeq gene 885332 886615 . + . ID=gene840;Name=YP_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04215;old_locus_tag=YP0819%2CYP_0819 NC_005810.1 Protein Homology CDS 885332 886615 . + 0 ID=cds816;Parent=gene840;Dbxref=Genbank:WP_002208594.1;Name=WP_002208594.1;gbkey=CDS;product=O-antigen synthesis protein WbyH;protein_id=WP_002208594.1;transl_table=11 NC_005810.1 RefSeq gene 886689 888031 . + . ID=gene841;Name=YP_RS04220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS04220;old_locus_tag=YP0820;pseudo=true NC_005810.1 Protein Homology CDS 886689 888031 . + 0 ID=cds817;Parent=gene841;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flippase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 888042 888755 . + . ID=gene842;Name=YP_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04225;old_locus_tag=YP0821 NC_005810.1 Protein Homology CDS 888042 888755 . + 0 ID=cds818;Parent=gene842;Dbxref=Genbank:WP_002215988.1;Name=WP_002215988.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002215988.1;transl_table=11 NC_005810.1 RefSeq gene 889135 890277 . + . ID=gene843;Name=YP_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04230;old_locus_tag=YP0822%2CYP_0822 NC_005810.1 Protein Homology CDS 889135 890277 . + 0 ID=cds819;Parent=gene843;Dbxref=Genbank:WP_002208592.1;Name=WP_002208592.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208592.1;transl_table=11 NC_005810.1 RefSeq gene 890599 891495 . + . ID=gene844;Name=YP_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04235;old_locus_tag=YP0823 NC_005810.1 Protein Homology CDS 890599 891495 . + 0 ID=cds820;Parent=gene844;Dbxref=Genbank:WP_002354669.1;Name=WP_002354669.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002354669.1;transl_table=11 NC_005810.1 RefSeq repeat_region 891256 891279 . + . ID=id167;Note=degenerate repeat region containing 2 copies of a 12bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 891744 892757 . + . ID=gene845;Name=YP_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04240;old_locus_tag=YP0824%2CYP_0824 NC_005810.1 Protein Homology CDS 891744 892757 . + 0 ID=cds821;Parent=gene845;Dbxref=Genbank:WP_002208591.1;Name=WP_002208591.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208591.1;transl_table=11 NC_005810.1 RefSeq gene 892773 893895 . + . ID=gene846;Name=YP_RS04245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS04245;old_locus_tag=YP0825;pseudo=true NC_005810.1 Protein Homology CDS 892773 893895 . + 0 ID=cds822;Parent=gene846;Note=catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 893901 894866 . + . ID=gene847;Name=YP_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04250;old_locus_tag=YP0826%2CYP_0826 NC_005810.1 Protein Homology CDS 893901 894866 . + 0 ID=cds823;Parent=gene847;Dbxref=Genbank:WP_002231095.1;Name=WP_002231095.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;product=GDP-fucose synthetase;protein_id=WP_002231095.1;transl_table=11 NC_005810.1 RefSeq repeat_region 894871 894912 . + . ID=id168;gbkey=repeat_region NC_005810.1 RefSeq gene 895060 896465 . + . ID=gene848;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=pseudogene;locus_tag=YP_RS04255;old_locus_tag=YP0827;pseudo=true NC_005810.1 Protein Homology CDS 895060 896465 . + 0 ID=cds824;Parent=gene848;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 896468 897211 . + . ID=gene849;Name=YP_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04260;old_locus_tag=YP0828%2CYP_0828 NC_005810.1 Protein Homology CDS 896468 897211 . + 0 ID=cds825;Parent=gene849;Dbxref=Genbank:WP_002208589.1;Name=WP_002208589.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002208589.1;transl_table=11 NC_005810.1 RefSeq gene 897216 898589 . + . ID=gene850;Name=YP_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04265;old_locus_tag=YP0829%2CYP_0829 NC_005810.1 Protein Homology CDS 897216 898589 . + 0 ID=cds826;Parent=gene850;Dbxref=Genbank:WP_002208588.1;Name=WP_002208588.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002208588.1;transl_table=11 NC_005810.1 RefSeq gene 898637 899788 . + . ID=gene851;Name=YP_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04270;old_locus_tag=YP0830%2CYP_0830 NC_005810.1 Protein Homology CDS 898637 899788 . + 0 ID=cds827;Parent=gene851;Dbxref=Genbank:WP_002208587.1;Name=WP_002208587.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_002208587.1;transl_table=11 NC_005810.1 RefSeq gene 899992 901296 . + . ID=gene852;Name=YP_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04275;old_locus_tag=YP0831%2CYP_0831 NC_005810.1 Protein Homology CDS 899992 901296 . + 0 ID=cds828;Parent=gene852;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NC_005810.1 RefSeq gene 901393 903084 . - . ID=gene853;Name=YP_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04280;old_locus_tag=YP0832%2CYP_0832 NC_005810.1 Protein Homology CDS 901393 903084 . - 0 ID=cds829;Parent=gene853;Dbxref=Genbank:WP_002208585.1;Name=WP_002208585.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_002208585.1;transl_table=11 NC_005810.1 RefSeq gene 903319 904533 . - . ID=gene854;Name=YP_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04285;old_locus_tag=YP0833%2CYP_0833 NC_005810.1 Protein Homology CDS 903319 904533 . - 0 ID=cds830;Parent=gene854;Dbxref=Genbank:WP_002208584.1;Name=WP_002208584.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_002208584.1;transl_table=11 NC_005810.1 RefSeq gene 904815 905072 . + . ID=gene855;Name=YP_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04290 NC_005810.1 GeneMarkS+ CDS 904815 905072 . + 0 ID=cds831;Parent=gene855;Dbxref=Genbank:WP_002215363.1;Name=WP_002215363.1;gbkey=CDS;product=protein ushA;protein_id=WP_002215363.1;transl_table=11 NC_005810.1 RefSeq gene 905062 905853 . + . ID=gene856;Name=YP_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04295 NC_005810.1 Protein Homology CDS 905062 905853 . + 0 ID=cds832;Parent=gene856;Dbxref=Genbank:WP_025476510.1;Name=WP_025476510.1;gbkey=CDS;product=metallophosphatase;protein_id=WP_025476510.1;transl_table=11 NC_005810.1 RefSeq gene 905847 906470 . + . ID=gene857;Name=YP_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04300 NC_005810.1 Protein Homology CDS 905847 906470 . + 0 ID=cds833;Parent=gene857;Dbxref=Genbank:WP_002228353.1;Name=WP_002228353.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002228353.1;transl_table=11 NC_005810.1 RefSeq gene 906574 906813 . - . ID=gene858;Name=YP_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04305;old_locus_tag=YP0835%2CYP_0835 NC_005810.1 Protein Homology CDS 906574 906813 . - 0 ID=cds834;Parent=gene858;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NC_005810.1 RefSeq gene 906827 907084 . - . ID=gene859;Name=YP_RS04310;gbkey=Gene;gene_biotype=other;locus_tag=YP_RS04310 NC_005810.1 RefSeq repeat_region 906900 907069 . + . ID=id169;gbkey=repeat_region NC_005810.1 RefSeq gene 907150 907629 . - . ID=gene860;Name=YP_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04315;old_locus_tag=YP0836%2CYP_0836 NC_005810.1 Protein Homology CDS 907150 907629 . - 0 ID=cds835;Parent=gene860;Dbxref=Genbank:WP_002208581.1;Name=WP_002208581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208581.1;transl_table=11 NC_005810.1 RefSeq gene 907893 908702 . - . ID=gene861;Name=YP_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04320;old_locus_tag=YP0837%2CYP_0837 NC_005810.1 Protein Homology CDS 907893 908702 . - 0 ID=cds836;Parent=gene861;Dbxref=Genbank:WP_002208580.1;Name=WP_002208580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208580.1;transl_table=11 NC_005810.1 RefSeq repeat_region 908742 909152 . + . ID=id170;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 908742 909113 . + . ID=id171;Note=degenerate repeat region containing 3 copies of a 124bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 909223 912108 . - . ID=gene862;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YP_RS04325;old_locus_tag=YP0838%2CYP_0838 NC_005810.1 Protein Homology CDS 909223 912108 . - 0 ID=cds837;Parent=gene862;Dbxref=Genbank:WP_002223301.1;Name=WP_002223301.1;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=WP_002223301.1;transl_table=11 NC_005810.1 RefSeq repeat_region 911543 911578 . + . ID=id172;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region;gene=copA NC_005810.1 RefSeq gene 912315 912734 . + . ID=gene863;Name=YP_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04330;old_locus_tag=YP0839%2CYP_0839 NC_005810.1 Protein Homology CDS 912315 912734 . + 0 ID=cds838;Parent=gene863;Dbxref=Genbank:WP_002208578.1;Name=WP_002208578.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208578.1;transl_table=11 NC_005810.1 RefSeq gene 912843 913292 . - . ID=gene864;Name=YP_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04335;old_locus_tag=YP0840%2CYP_0840 NC_005810.1 Protein Homology CDS 912843 913292 . - 0 ID=cds839;Parent=gene864;Dbxref=Genbank:WP_002208577.1;Name=WP_002208577.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208577.1;transl_table=11 NC_005810.1 RefSeq gene 913295 914209 . - . ID=gene865;Name=YP_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04340;old_locus_tag=YP0841%2CYP_0841 NC_005810.1 Protein Homology CDS 913295 914209 . - 0 ID=cds840;Parent=gene865;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11 NC_005810.1 RefSeq gene 914404 915273 . - . ID=gene866;Name=YP_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04345;old_locus_tag=YP0842%2CYP_0842 NC_005810.1 Protein Homology CDS 914404 915273 . - 0 ID=cds841;Parent=gene866;Dbxref=Genbank:WP_002208575.1;Name=WP_002208575.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002208575.1;transl_table=11 NC_005810.1 RefSeq gene 915350 916126 . - . ID=gene867;Name=YP_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04350;old_locus_tag=YP0843%2CYP_0843 NC_005810.1 Protein Homology CDS 915350 916126 . - 0 ID=cds842;Parent=gene867;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NC_005810.1 RefSeq repeat_region 916211 916248 . + . ID=id173;Note=exact repeat region containing 2 copies of a 19 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 916513 917148 . - . ID=gene868;Name=YP_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04355;old_locus_tag=YP0844%2CYP_0844 NC_005810.1 Protein Homology CDS 916513 917148 . - 0 ID=cds843;Parent=gene868;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NC_005810.1 RefSeq gene 917119 917805 . + . ID=gene869;Name=YP_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04360;old_locus_tag=YP0845%2CYP_0845 NC_005810.1 Protein Homology CDS 917119 917805 . + 0 ID=cds844;Parent=gene869;Dbxref=Genbank:WP_002208572.1;Name=WP_002208572.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002208572.1;transl_table=11 NC_005810.1 RefSeq gene 917802 920231 . + . ID=gene870;Name=YP_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04365;old_locus_tag=YP0846%2CYP_0846 NC_005810.1 Protein Homology CDS 917802 920231 . + 0 ID=cds845;Parent=gene870;Dbxref=Genbank:WP_002208571.1;Name=WP_002208571.1;gbkey=CDS;product=permease;protein_id=WP_002208571.1;transl_table=11 NC_005810.1 RefSeq gene 920275 921339 . - . ID=gene871;Name=YP_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04370;old_locus_tag=YP0847%2CYP_0847 NC_005810.1 Protein Homology CDS 920275 921339 . - 0 ID=cds846;Parent=gene871;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11 NC_005810.1 RefSeq gene 921336 921860 . - . ID=gene872;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YP_RS04375;old_locus_tag=YP0848%2CYP_0848 NC_005810.1 Protein Homology CDS 921336 921860 . - 0 ID=cds847;Parent=gene872;Dbxref=Genbank:WP_002208569.1;Name=WP_002208569.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NC_005810.1 RefSeq gene 922156 922878 . - . ID=gene873;Name=YP_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04380;old_locus_tag=YP0850%2CYP_0850 NC_005810.1 Protein Homology CDS 922156 922878 . - 0 ID=cds848;Parent=gene873;Dbxref=Genbank:WP_002208568.1;Name=WP_002208568.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_002208568.1;transl_table=11 NC_005810.1 RefSeq gene 922889 923383 . - . ID=gene874;Name=YP_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04385;old_locus_tag=YP0851%2CYP_0851 NC_005810.1 Protein Homology CDS 922889 923383 . - 0 ID=cds849;Parent=gene874;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11 NC_005810.1 RefSeq gene 923593 924978 . + . ID=gene875;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YP_RS04390;old_locus_tag=YP0852%2CYP_0852 NC_005810.1 Protein Homology CDS 923593 924978 . + 0 ID=cds850;Parent=gene875;Dbxref=Genbank:WP_002222677.1;Name=WP_002222677.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_002222677.1;transl_table=11 NC_005810.1 RefSeq gene 925105 925335 . + . ID=gene876;Name=YP_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04395 NC_005810.1 Protein Homology CDS 925105 925335 . + 0 ID=cds851;Parent=gene876;Dbxref=Genbank:WP_002430127.1;Name=WP_002430127.1;gbkey=CDS;product=invasin;protein_id=WP_002430127.1;transl_table=11 NC_005810.1 RefSeq repeat_region 925174 925894 . + . ID=id174;gbkey=repeat_region NC_005810.1 RefSeq region 925180 925891 . + . ID=id175;gbkey=mobile_element NC_005810.1 RefSeq gene 925325 925783 . + . ID=gene877;Name=YP_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04400;old_locus_tag=YP0853%2CYP_0853 NC_005810.1 Protein Homology CDS 925325 925783 . + 0 ID=cds852;Parent=gene877;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 925930 926142 . - . ID=gene878;Name=YP_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04405;old_locus_tag=YP0854%2CYP_0854 NC_005810.1 Protein Homology CDS 925930 926142 . - 0 ID=cds853;Parent=gene878;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11 NC_005810.1 RefSeq gene 926157 927023 . - . ID=gene879;Name=YP_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04410;old_locus_tag=YP0855%2CYP_0855 NC_005810.1 Protein Homology CDS 926157 927023 . - 0 ID=cds854;Parent=gene879;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11 NC_005810.1 RefSeq gene 927238 927314 . + . ID=gene880;Name=YP_RS04415;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS04415;old_locus_tag=tRNA-Arg_3%2CYP_t15 NC_005810.1 tRNAscan-SE tRNA 927238 927314 . + . ID=rna22;Parent=gene880;anticodon=(pos:927272..927274);gbkey=tRNA;product=tRNA-Arg NC_005810.1 tRNAscan-SE exon 927238 927314 . + . ID=id176;Parent=rna22;anticodon=(pos:927272..927274);gbkey=tRNA;product=tRNA-Arg NC_005810.1 RefSeq gene 927378 927560 . - . ID=gene881;Name=YP_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04420;old_locus_tag=YP0857%2CYP_0857 NC_005810.1 Protein Homology CDS 927378 927560 . - 0 ID=cds855;Parent=gene881;Dbxref=Genbank:WP_002215270.1;Name=WP_002215270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215270.1;transl_table=11 NC_005810.1 RefSeq gene 927819 928019 . - . ID=gene882;Name=YP_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04425;old_locus_tag=YP0858%2CYP_0858 NC_005810.1 Protein Homology CDS 927819 928019 . - 0 ID=cds856;Parent=gene882;Dbxref=Genbank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NC_005810.1 RefSeq gene 928133 928780 . - . ID=gene883;Name=YP_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04430;old_locus_tag=YP0859%2CYP_0859 NC_005810.1 Protein Homology CDS 928133 928780 . - 0 ID=cds857;Parent=gene883;Dbxref=Genbank:WP_002231096.1;Name=WP_002231096.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231096.1;transl_table=11 NC_005810.1 RefSeq gene 928765 929103 . - . ID=gene884;Name=YP_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04435;old_locus_tag=YP0860%2CYP_0860 NC_005810.1 Protein Homology CDS 928765 929103 . - 0 ID=cds858;Parent=gene884;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NC_005810.1 RefSeq gene 929676 929882 . + . ID=gene885;Name=YP_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04440;old_locus_tag=YP0862%2CYP_0862 NC_005810.1 Protein Homology CDS 929676 929882 . + 0 ID=cds859;Parent=gene885;Dbxref=Genbank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NC_005810.1 RefSeq gene 929879 930055 . + . ID=gene886;Name=YP_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04445;old_locus_tag=YP0863 NC_005810.1 Protein Homology CDS 929879 930055 . + 0 ID=cds860;Parent=gene886;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11 NC_005810.1 RefSeq gene 930282 930884 . + . ID=gene887;Name=YP_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04450;old_locus_tag=YP0864%2CYP_0864 NC_005810.1 Protein Homology CDS 930282 930884 . + 0 ID=cds861;Parent=gene887;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11 NC_005810.1 RefSeq gene 930877 931806 . + . ID=gene888;Name=YP_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04455;old_locus_tag=YP0865%2CYP_0865 NC_005810.1 Protein Homology CDS 930877 931806 . + 0 ID=cds862;Parent=gene888;Dbxref=Genbank:WP_002209769.1;Name=WP_002209769.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_002209769.1;transl_table=11 NC_005810.1 RefSeq gene 931816 932448 . + . ID=gene889;Name=YP_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04460;old_locus_tag=YP0866%2CYP_0866 NC_005810.1 Protein Homology CDS 931816 932448 . + 0 ID=cds863;Parent=gene889;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11 NC_005810.1 RefSeq gene 932445 934208 . + . ID=gene890;Name=YP_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04465;old_locus_tag=YP0867%2CYP_0867 NC_005810.1 Protein Homology CDS 932445 934208 . + 0 ID=cds864;Parent=gene890;Dbxref=Genbank:WP_002209767.1;Name=WP_002209767.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002209767.1;transl_table=11 NC_005810.1 RefSeq gene 934201 935520 . + . ID=gene891;Name=YP_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04470;old_locus_tag=YP0868%2CYP_0868 NC_005810.1 Protein Homology CDS 934201 935520 . + 0 ID=cds865;Parent=gene891;Dbxref=Genbank:WP_002209766.1;Name=WP_002209766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209766.1;transl_table=11 NC_005810.1 RefSeq gene 935502 935903 . + . ID=gene892;Name=YP_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04475;old_locus_tag=YP0869%2CYP_0869 NC_005810.1 Protein Homology CDS 935502 935903 . + 0 ID=cds866;Parent=gene892;Dbxref=Genbank:WP_002209765.1;Name=WP_002209765.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209765.1;transl_table=11 NC_005810.1 RefSeq gene 936000 936305 . + . ID=gene893;Name=YP_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04480;old_locus_tag=YP0870%2CYP_0870 NC_005810.1 Protein Homology CDS 936000 936305 . + 0 ID=cds867;Parent=gene893;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11 NC_005810.1 RefSeq repeat_region 936413 936438 . + . ID=id177;Note=degenerate repeat region containing 2 copies of a 13bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 936604 938563 . + . ID=id178;gbkey=repeat_region NC_005810.1 RefSeq region 936607 938559 . - . ID=id179;gbkey=mobile_element NC_005810.1 RefSeq gene 936672 937451 . - . ID=gene894;Name=YP_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04485;old_locus_tag=YP0871%2CYP_0871 NC_005810.1 Protein Homology CDS 936672 937451 . - 0 ID=cds868;Parent=gene894;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 937451 938473 . - . ID=gene895;Name=YP_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04490;old_locus_tag=YP0872%2CYP_0872 NC_005810.1 Protein Homology CDS 937451 938473 . - 0 ID=cds869;Parent=gene895;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 938487 938861 . - . ID=gene896;Name=YP_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04495;old_locus_tag=YP0873 NC_005810.1 Protein Homology CDS 938487 938861 . - 0 ID=cds870;Parent=gene896;Dbxref=Genbank:WP_002211287.1;Name=WP_002211287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211287.1;transl_table=11 NC_005810.1 RefSeq gene 939107 939295 . + . ID=gene897;Name=YP_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04500;old_locus_tag=YP0874%2CYP_0874 NC_005810.1 Protein Homology CDS 939107 939295 . + 0 ID=cds871;Parent=gene897;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11 NC_005810.1 RefSeq repeat_region 939346 939381 . + . ID=id180;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 939561 940079 . - . ID=gene898;Name=YP_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04505;old_locus_tag=YP0875%2CYP_0875 NC_005810.1 Protein Homology CDS 939561 940079 . - 0 ID=cds872;Parent=gene898;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11 NC_005810.1 RefSeq gene 940148 941899 . - . ID=gene899;Name=YP_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04510;old_locus_tag=YP0876%2CYP_0876 NC_005810.1 Protein Homology CDS 940148 941899 . - 0 ID=cds873;Parent=gene899;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11 NC_005810.1 RefSeq gene 942110 942565 . + . ID=gene900;Name=YP_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04515;old_locus_tag=YP0877%2CYP_0877 NC_005810.1 Protein Homology CDS 942110 942565 . + 0 ID=cds874;Parent=gene900;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11 NC_005810.1 RefSeq repeat_region 942622 943346 . + . ID=id181;gbkey=repeat_region NC_005810.1 RefSeq region 942626 943337 . - . ID=id182;gbkey=mobile_element NC_005810.1 RefSeq gene 942734 943192 . - . ID=gene901;Name=YP_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04520;old_locus_tag=YP0878%2CYP_0878 NC_005810.1 Protein Homology CDS 942734 943192 . - 0 ID=cds875;Parent=gene901;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 943393 944397 . - . ID=gene902;Name=YP_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04525;old_locus_tag=YP0879%2CYP_0879 NC_005810.1 Protein Homology CDS 943393 944397 . - 0 ID=cds876;Parent=gene902;Dbxref=Genbank:WP_002208835.1;Name=WP_002208835.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_002208835.1;transl_table=11 NC_005810.1 RefSeq gene 944575 944802 . + . ID=gene903;Name=YP_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04530;old_locus_tag=YP0880%2CYP_0880 NC_005810.1 Protein Homology CDS 944575 944802 . + 0 ID=cds877;Parent=gene903;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11 NC_005810.1 RefSeq gene 944830 946626 . + . ID=gene904;Name=YP_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04535;old_locus_tag=YP0881%2CYP_0881 NC_005810.1 Protein Homology CDS 944830 946626 . + 0 ID=cds878;Parent=gene904;Dbxref=Genbank:WP_002230706.1;Name=WP_002230706.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230706.1;transl_table=11 NC_005810.1 RefSeq gene 946731 946807 . + . ID=gene905;Name=YP_RS04540;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS04540;old_locus_tag=tRNA-Pro_1%2CYP_t16 NC_005810.1 tRNAscan-SE tRNA 946731 946807 . + . ID=rna23;Parent=gene905;anticodon=(pos:946765..946767);gbkey=tRNA;product=tRNA-Pro NC_005810.1 tRNAscan-SE exon 946731 946807 . + . ID=id183;Parent=rna23;anticodon=(pos:946765..946767);gbkey=tRNA;product=tRNA-Pro NC_005810.1 RefSeq repeat_region 947478 948030 . + . ID=id184;gbkey=repeat_region NC_005810.1 RefSeq gene 947597 948745 . + . ID=gene906;Name=YP_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04550;old_locus_tag=YP0883%2CYP_0883 NC_005810.1 Protein Homology CDS 947597 948745 . + 0 ID=cds879;Parent=gene906;Dbxref=Genbank:WP_002208839.1;Name=WP_002208839.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002208839.1;transl_table=11 NC_005810.1 RefSeq gene 948758 949246 . + . ID=gene907;Name=YP_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04555;old_locus_tag=YP0884%2CYP_0884 NC_005810.1 Protein Homology CDS 948758 949246 . + 0 ID=cds880;Parent=gene907;Dbxref=Genbank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208840.1;transl_table=11 NC_005810.1 RefSeq repeat_region 949505 949625 . + . ID=id185;gbkey=repeat_region NC_005810.1 RefSeq gene 949946 950308 . + . ID=gene908;Name=YP_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04565;old_locus_tag=YP0885%2CYP_0885 NC_005810.1 Protein Homology CDS 949946 950308 . + 0 ID=cds881;Parent=gene908;Dbxref=Genbank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NC_005810.1 RefSeq gene 950434 951870 . - . ID=gene909;Name=YP_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04570;old_locus_tag=YP0886%2CYP_0886 NC_005810.1 Protein Homology CDS 950434 951870 . - 0 ID=cds882;Parent=gene909;Dbxref=Genbank:WP_002208842.1;Name=WP_002208842.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NC_005810.1 RefSeq gene 952161 952901 . - . ID=gene910;Name=YP_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04575;old_locus_tag=YP0887%2CYP_0887 NC_005810.1 Protein Homology CDS 952161 952901 . - 0 ID=cds883;Parent=gene910;Dbxref=Genbank:WP_002208843.1;Name=WP_002208843.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NC_005810.1 RefSeq gene 953199 953978 . - . ID=gene911;Name=YP_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04580;old_locus_tag=YP0888%2CYP_0888 NC_005810.1 Protein Homology CDS 953199 953978 . - 0 ID=cds884;Parent=gene911;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11 NC_005810.1 RefSeq gene 954075 954422 . - . ID=gene912;Name=YP_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04585;old_locus_tag=YP0889%2CYP_0889 NC_005810.1 Protein Homology CDS 954075 954422 . - 0 ID=cds885;Parent=gene912;Dbxref=Genbank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208846.1;transl_table=11 NC_005810.1 RefSeq gene 954419 954679 . - . ID=gene913;Name=YP_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04590;old_locus_tag=YP0890%2CYP_0890 NC_005810.1 Protein Homology CDS 954419 954679 . - 0 ID=cds886;Parent=gene913;Dbxref=Genbank:WP_002215458.1;Name=WP_002215458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215458.1;transl_table=11 NC_005810.1 RefSeq gene 954676 955812 . - . ID=gene914;Name=YP_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04595;old_locus_tag=YP0891%2CYP_0891 NC_005810.1 Protein Homology CDS 954676 955812 . - 0 ID=cds887;Parent=gene914;Dbxref=Genbank:WP_002208847.1;Name=WP_002208847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208847.1;transl_table=11 NC_005810.1 RefSeq gene 955816 956271 . - . ID=gene915;Name=YP_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04600;old_locus_tag=YP0892%2CYP_0892 NC_005810.1 Protein Homology CDS 955816 956271 . - 0 ID=cds888;Parent=gene915;Dbxref=Genbank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208848.1;transl_table=11 NC_005810.1 RefSeq gene 956268 956864 . - . ID=gene916;Name=YP_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04605;old_locus_tag=YP0893%2CYP_0893 NC_005810.1 Protein Homology CDS 956268 956864 . - 0 ID=cds889;Parent=gene916;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11 NC_005810.1 RefSeq gene 956880 957935 . - . ID=gene917;Name=YP_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04610;old_locus_tag=YP0894%2CYP_0894 NC_005810.1 Protein Homology CDS 956880 957935 . - 0 ID=cds890;Parent=gene917;Dbxref=Genbank:WP_011171778.1;Name=WP_011171778.1;gbkey=CDS;product=tail protein;protein_id=WP_011171778.1;transl_table=11 NC_005810.1 RefSeq gene 957932 959338 . - . ID=gene918;Name=YP_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04615;old_locus_tag=YP0895%2CYP_0895 NC_005810.1 Protein Homology CDS 957932 959338 . - 0 ID=cds891;Parent=gene918;Dbxref=Genbank:WP_002208852.1;Name=WP_002208852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208852.1;transl_table=11 NC_005810.1 RefSeq repeat_region 959396 959565 . + . ID=id186;gbkey=repeat_region NC_005810.1 RefSeq gene 959605 961098 . - . ID=gene919;Name=YP_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04620;old_locus_tag=YP0896%2CYP_0896 NC_005810.1 Protein Homology CDS 959605 961098 . - 0 ID=cds892;Parent=gene919;Dbxref=Genbank:WP_002208853.1;Name=WP_002208853.1;gbkey=CDS;product=coat protein;protein_id=WP_002208853.1;transl_table=11 NC_005810.1 RefSeq gene 961219 961518 . - . ID=gene920;Name=YP_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04625;old_locus_tag=YP0897%2CYP_0897 NC_005810.1 Protein Homology CDS 961219 961518 . - 0 ID=cds893;Parent=gene920;Dbxref=Genbank:WP_002208854.1;Name=WP_002208854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208854.1;transl_table=11 NC_005810.1 RefSeq gene 961520 961888 . - . ID=gene921;Name=YP_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04630;old_locus_tag=YP0898%2CYP_0898 NC_005810.1 Protein Homology CDS 961520 961888 . - 0 ID=cds894;Parent=gene921;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11 NC_005810.1 RefSeq gene 961910 963418 . - . ID=gene922;Name=YP_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04635;old_locus_tag=YP0899%2CYP_0899 NC_005810.1 Protein Homology CDS 961910 963418 . - 0 ID=cds895;Parent=gene922;Dbxref=Genbank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;product=tail protein;protein_id=WP_002208856.1;transl_table=11 NC_005810.1 RefSeq gene 963415 963609 . - . ID=gene923;Name=YP_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04640;old_locus_tag=YP0900%2CYP_0900 NC_005810.1 Protein Homology CDS 963415 963609 . - 0 ID=cds896;Parent=gene923;Dbxref=Genbank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208857.1;transl_table=11 NC_005810.1 RefSeq gene 963614 964183 . - . ID=gene924;Name=YP_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04645;old_locus_tag=YP0901%2CYP_0901 NC_005810.1 Protein Homology CDS 963614 964183 . - 0 ID=cds897;Parent=gene924;Dbxref=Genbank:WP_002363609.1;Name=WP_002363609.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002363609.1;transl_table=11 NC_005810.1 RefSeq gene 964277 964567 . - . ID=gene925;Name=YP_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04650;old_locus_tag=YP0902%2CYP_0902 NC_005810.1 Protein Homology CDS 964277 964567 . - 0 ID=cds898;Parent=gene925;Dbxref=Genbank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NC_005810.1 RefSeq gene 965181 965975 . - . ID=gene926;Name=YP_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04655;old_locus_tag=YP0903%2CYP_0903 NC_005810.1 Protein Homology CDS 965181 965975 . - 0 ID=cds899;Parent=gene926;Dbxref=Genbank:WP_002208860.1;Name=WP_002208860.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002208860.1;transl_table=11 NC_005810.1 RefSeq gene 965951 966760 . - . ID=gene927;Name=YP_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04660;old_locus_tag=YP0904%2CYP_0904 NC_005810.1 Protein Homology CDS 965951 966760 . - 0 ID=cds900;Parent=gene927;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11 NC_005810.1 RefSeq gene 966766 967415 . - . ID=gene928;Name=YP_RS04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS04665;old_locus_tag=YP0905%2CYP_0905;pseudo=true NC_005810.1 Protein Homology CDS 966766 967415 . - 0 ID=cds901;Parent=gene928;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aldolase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 967472 968776 . - . ID=gene929;Name=YP_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04670;old_locus_tag=YP0906%2CYP_0906 NC_005810.1 Protein Homology CDS 967472 968776 . - 0 ID=cds902;Parent=gene929;Dbxref=Genbank:WP_002208862.1;Name=WP_002208862.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_002208862.1;transl_table=11 NC_005810.1 RefSeq gene 968987 969466 . - . ID=gene930;Name=YP_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04675;old_locus_tag=YP0907%2CYP_0907 NC_005810.1 Protein Homology CDS 968987 969466 . - 0 ID=cds903;Parent=gene930;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11 NC_005810.1 RefSeq gene 969740 970462 . + . ID=gene931;Name=YP_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04680;old_locus_tag=YP0908%2CYP_0908 NC_005810.1 Protein Homology CDS 969740 970462 . + 0 ID=cds904;Parent=gene931;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11 NC_005810.1 RefSeq gene 970668 970910 . + . ID=gene932;Name=YP_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04685;old_locus_tag=YP0909%2CYP_0909 NC_005810.1 Protein Homology CDS 970668 970910 . + 0 ID=cds905;Parent=gene932;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11 NC_005810.1 RefSeq gene 971082 972017 . + . ID=gene933;Name=YP_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04690;old_locus_tag=YP0910%2CYP_0910 NC_005810.1 Protein Homology CDS 971082 972017 . + 0 ID=cds906;Parent=gene933;Dbxref=Genbank:WP_002208867.1;Name=WP_002208867.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_002208867.1;transl_table=11 NC_005810.1 RefSeq repeat_region 972074 972118 . + . ID=id187;Note=degenerate repeat region containing 3 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 972424 974211 . + . ID=gene934;Name=YP_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04695;old_locus_tag=YP0911%2CYP_0911 NC_005810.1 Protein Homology CDS 972424 974211 . + 0 ID=cds907;Parent=gene934;Dbxref=Genbank:WP_002208868.1;Name=WP_002208868.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NC_005810.1 RefSeq gene 974285 975274 . - . ID=gene935;Name=YP_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04700;old_locus_tag=YP0912%2CYP_0912 NC_005810.1 Protein Homology CDS 974285 975274 . - 0 ID=cds908;Parent=gene935;Dbxref=Genbank:WP_011906349.1;Name=WP_011906349.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_011906349.1;transl_table=11 NC_005810.1 RefSeq gene 975690 977216 . + . ID=gene936;Name=YP_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04705;old_locus_tag=YP0913%2CYP_0913 NC_005810.1 Protein Homology CDS 975690 977216 . + 0 ID=cds909;Parent=gene936;Dbxref=Genbank:WP_002208870.1;Name=WP_002208870.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002208870.1;transl_table=11 NC_005810.1 RefSeq gene 977203 977373 . - . ID=gene937;Name=YP_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04710 NC_005810.1 Protein Homology CDS 977203 977373 . - 0 ID=cds910;Parent=gene937;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11 NC_005810.1 RefSeq gene 977491 978657 . + . ID=gene938;Name=YP_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04715;old_locus_tag=YP0915%2CYP_0915 NC_005810.1 Protein Homology CDS 977491 978657 . + 0 ID=cds911;Parent=gene938;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11 NC_005810.1 RefSeq repeat_region 977572 977619 . + . ID=id188;Note=degenerate repeat region containing 2 copies of a 24bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 978845 978920 . - . ID=gene939;Name=YP_RS04720;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS04720;old_locus_tag=tRNA-Thr_1%2CYP_t17 NC_005810.1 tRNAscan-SE tRNA 978845 978920 . - . ID=rna24;Parent=gene939;anticodon=(pos:complement(978885..978887));gbkey=tRNA;product=tRNA-Thr NC_005810.1 tRNAscan-SE exon 978845 978920 . - . ID=id189;Parent=rna24;anticodon=(pos:complement(978885..978887));gbkey=tRNA;product=tRNA-Thr NC_005810.1 RefSeq gene 978926 979013 . - . ID=gene940;Name=YP_RS04725;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS04725;old_locus_tag=tRNA-Ser_2%2CYP_t18 NC_005810.1 tRNAscan-SE tRNA 978926 979013 . - . ID=rna25;Parent=gene940;anticodon=(pos:complement(978977..978979));gbkey=tRNA;product=tRNA-Ser NC_005810.1 tRNAscan-SE exon 978926 979013 . - . ID=id190;Parent=rna25;anticodon=(pos:complement(978977..978979));gbkey=tRNA;product=tRNA-Ser NC_005810.1 RefSeq gene 979397 980512 . - . ID=gene941;Name=YP_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04730;old_locus_tag=YP0916%2CYP_0916 NC_005810.1 Protein Homology CDS 979397 980512 . - 0 ID=cds912;Parent=gene941;Dbxref=Genbank:WP_002210826.1;Name=WP_002210826.1;gbkey=CDS;product=porin;protein_id=WP_002210826.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 980678 980697 . - . ID=id191;Dbxref=CollecTF:EXPSITE_0002b290;Note=Transcription factor binding site for NP_991538. Originally reported in Yersinia pestis biovar Microtus str. 201~Evidence of regulation for: YP_0916;gbkey=protein_bind NC_005810.1 RefSeq gene 981615 982769 . + . ID=gene942;Name=YP_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04740;old_locus_tag=YP0917%2CYP_0917 NC_005810.1 Protein Homology CDS 981615 982769 . + 0 ID=cds913;Parent=gene942;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NC_005810.1 RefSeq gene 982868 984745 . + . ID=gene943;Name=YP_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04745;old_locus_tag=YP0918 NC_005810.1 Protein Homology CDS 982868 984745 . + 0 ID=cds914;Parent=gene943;Dbxref=Genbank:WP_002231290.1;Name=WP_002231290.1;gbkey=CDS;product=ATPase;protein_id=WP_002231290.1;transl_table=11 NC_005810.1 RefSeq gene 984913 985485 . + . ID=gene944;Name=YP_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04750 NC_005810.1 Protein Homology CDS 984913 985485 . + 0 ID=cds915;Parent=gene944;Dbxref=Genbank:WP_002216094.1;Name=WP_002216094.1;gbkey=CDS;product=histidine phosphotransferase;protein_id=WP_002216094.1;transl_table=11 NC_005810.1 RefSeq gene 985488 986141 . + . ID=gene945;Name=YP_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04755;old_locus_tag=YP0919%2CYP_0919 NC_005810.1 Protein Homology CDS 985488 986141 . + 0 ID=cds916;Parent=gene945;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11 NC_005810.1 RefSeq gene 986209 988989 . - . ID=gene946;Name=YP_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04760;old_locus_tag=YP0920%2CYP_0920 NC_005810.1 Protein Homology CDS 986209 988989 . - 0 ID=cds917;Parent=gene946;Dbxref=Genbank:WP_011906350.1;Name=WP_011906350.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_011906350.1;transl_table=11 NC_005810.1 RefSeq gene 989142 989267 . - . ID=gene947;Name=YP_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04765 NC_005810.1 Protein Homology CDS 989142 989267 . - 0 ID=cds918;Parent=gene947;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11 NC_005810.1 RefSeq gene 989270 991945 . - . ID=gene948;Name=YP_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04770;old_locus_tag=YP0921%2CYP_0921 NC_005810.1 Protein Homology CDS 989270 991945 . - 0 ID=cds919;Parent=gene948;Dbxref=Genbank:WP_002210821.1;Name=WP_002210821.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_002210821.1;transl_table=11 NC_005810.1 RefSeq repeat_region 989278 989313 . + . ID=id192;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 992207 992935 . + . ID=gene949;Name=YP_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04775;old_locus_tag=YP0922%2CYP_0922 NC_005810.1 Protein Homology CDS 992207 992935 . + 0 ID=cds920;Parent=gene949;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11 NC_005810.1 RefSeq gene 993429 995717 . + . ID=gene950;Name=YP_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04780;old_locus_tag=YP0923%2CYP_0923 NC_005810.1 Protein Homology CDS 993429 995717 . + 0 ID=cds921;Parent=gene950;Dbxref=Genbank:WP_002210818.1;Name=WP_002210818.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NC_005810.1 RefSeq gene 995880 997010 . + . ID=gene951;Name=YP_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04785;old_locus_tag=YP0924%2CYP_0924 NC_005810.1 Protein Homology CDS 995880 997010 . + 0 ID=cds922;Parent=gene951;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NC_005810.1 RefSeq gene 997014 997271 . + . ID=gene952;Name=YP_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04790;old_locus_tag=YP0925%2CYP_0925 NC_005810.1 Protein Homology CDS 997014 997271 . + 0 ID=cds923;Parent=gene952;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11 NC_005810.1 RefSeq gene 997306 997815 . + . ID=gene953;Name=YP_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04795;old_locus_tag=YP0926%2CYP_0926 NC_005810.1 Protein Homology CDS 997306 997815 . + 0 ID=cds924;Parent=gene953;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11 NC_005810.1 RefSeq gene 997873 999066 . - . ID=gene954;Name=YP_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04800;old_locus_tag=YP0927%2CYP_0927 NC_005810.1 Protein Homology CDS 997873 999066 . - 0 ID=cds925;Parent=gene954;Dbxref=Genbank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210814.1;transl_table=11 NC_005810.1 RefSeq gene 999685 1000893 . + . ID=gene955;Name=YP_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04805;old_locus_tag=YP0929%2CYP_0929 NC_005810.1 Protein Homology CDS 999685 1000893 . + 0 ID=cds926;Parent=gene955;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NC_005810.1 RefSeq gene 1001150 1001692 . - . ID=gene956;Name=YP_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04810;old_locus_tag=YP0930%2CYP_0930 NC_005810.1 Protein Homology CDS 1001150 1001692 . - 0 ID=cds927;Parent=gene956;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11 NC_005810.1 RefSeq gene 1002050 1003492 . + . ID=gene957;Name=YP_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04815;old_locus_tag=YP0931%2CYP_0931 NC_005810.1 Protein Homology CDS 1002050 1003492 . + 0 ID=cds928;Parent=gene957;Dbxref=Genbank:WP_002228030.1;Name=WP_002228030.1;gbkey=CDS;product=catalase;protein_id=WP_002228030.1;transl_table=11 NC_005810.1 RefSeq gene 1003560 1005740 . - . ID=gene958;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YP_RS04820;old_locus_tag=YP0932%2CYP_0932 NC_005810.1 Protein Homology CDS 1003560 1005740 . - 0 ID=cds929;Parent=gene958;Dbxref=Genbank:WP_002210810.1;Name=WP_002210810.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_002210810.1;transl_table=11 NC_005810.1 RefSeq gene 1006010 1007125 . + . ID=gene959;Name=YP_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04825;old_locus_tag=YP0933%2CYP_0933 NC_005810.1 Protein Homology CDS 1006010 1007125 . + 0 ID=cds930;Parent=gene959;Dbxref=Genbank:WP_002210809.1;Name=WP_002210809.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_002210809.1;transl_table=11 NC_005810.1 RefSeq gene 1007537 1008427 . + . ID=gene960;Name=YP_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04830;old_locus_tag=YP0934%2CYP_0934 NC_005810.1 Protein Homology CDS 1007537 1008427 . + 0 ID=cds931;Parent=gene960;Dbxref=Genbank:WP_002210807.1;Name=WP_002210807.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002210807.1;transl_table=11 NC_005810.1 RefSeq gene 1008552 1008755 . + . ID=gene961;Name=YP_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04835;old_locus_tag=YP0935%2CYP_0935 NC_005810.1 Protein Homology CDS 1008552 1008755 . + 0 ID=cds932;Parent=gene961;Dbxref=Genbank:WP_002210806.1;Name=WP_002210806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210806.1;transl_table=11 NC_005810.1 RefSeq gene 1008873 1011179 . - . ID=gene962;Name=YP_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04840;old_locus_tag=YP0936%2CYP_0936 NC_005810.1 Protein Homology CDS 1008873 1011179 . - 0 ID=cds933;Parent=gene962;Dbxref=Genbank:WP_002210805.1;Name=WP_002210805.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_002210805.1;transl_table=11 NC_005810.1 RefSeq gene 1011249 1012583 . - . ID=gene963;Name=YP_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04845;old_locus_tag=YP0937%2CYP_0937 NC_005810.1 Protein Homology CDS 1011249 1012583 . - 0 ID=cds934;Parent=gene963;Dbxref=Genbank:WP_002210804.1;Name=WP_002210804.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_002210804.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1012920 1012961 . + . ID=id193;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1013030 1013073 . + . ID=id194;Note=degenerate repeat region containing 2 copies of a 22bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1013067 1013903 . - . ID=gene964;Name=YP_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04850;old_locus_tag=YP0938%2CYP_0938 NC_005810.1 Protein Homology CDS 1013067 1013903 . - 0 ID=cds935;Parent=gene964;Dbxref=Genbank:WP_002210803.1;Name=WP_002210803.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210803.1;transl_table=11 NC_005810.1 RefSeq gene 1013900 1014838 . - . ID=gene965;Name=YP_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04855;old_locus_tag=YP0939%2CYP_0939 NC_005810.1 Protein Homology CDS 1013900 1014838 . - 0 ID=cds936;Parent=gene965;Dbxref=Genbank:WP_002210802.1;Name=WP_002210802.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210802.1;transl_table=11 NC_005810.1 RefSeq gene 1014835 1015971 . - . ID=gene966;Name=YP_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04860;old_locus_tag=YP0940%2CYP_0940 NC_005810.1 Protein Homology CDS 1014835 1015971 . - 0 ID=cds937;Parent=gene966;Dbxref=Genbank:WP_011171780.1;Name=WP_011171780.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_011171780.1;transl_table=11 NC_005810.1 RefSeq gene 1016232 1016552 . - . ID=gene967;Name=YP_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04865 NC_005810.1 Protein Homology CDS 1016232 1016552 . - 0 ID=cds938;Parent=gene967;Dbxref=Genbank:WP_002214181.1;Name=WP_002214181.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214181.1;transl_table=11 NC_005810.1 RefSeq gene 1016697 1017164 . - . ID=gene968;Name=YP_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04870 NC_005810.1 Protein Homology CDS 1016697 1017164 . - 0 ID=cds939;Parent=gene968;Dbxref=Genbank:WP_002214183.1;Name=WP_002214183.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214183.1;transl_table=11 NC_005810.1 RefSeq gene 1017900 1018754 . + . ID=gene969;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YP_RS04875;old_locus_tag=YP0942%2CYP_0942 NC_005810.1 Protein Homology CDS 1017900 1018754 . + 0 ID=cds940;Parent=gene969;Dbxref=Genbank:WP_002210799.1;Name=WP_002210799.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002210799.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1018792 1018882 . + . ID=id195;Note=degenerate repeat region containing 13 copies of a 7bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1018909 1020324 . - . ID=gene970;Name=YP_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04880;old_locus_tag=YP0943%2CYP_0943 NC_005810.1 Protein Homology CDS 1018909 1020324 . - 0 ID=cds941;Parent=gene970;Dbxref=Genbank:WP_002210798.1;Name=WP_002210798.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_002210798.1;transl_table=11 NC_005810.1 RefSeq gene 1020348 1021205 . - . ID=gene971;Name=YP_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04885;old_locus_tag=YP0944%2CYP_0944 NC_005810.1 Protein Homology CDS 1020348 1021205 . - 0 ID=cds942;Parent=gene971;Dbxref=Genbank:WP_002210797.1;Name=WP_002210797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210797.1;transl_table=11 NC_005810.1 RefSeq gene 1021320 1022018 . - . ID=gene972;Name=YP_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04890;old_locus_tag=YP0945%2CYP_0945 NC_005810.1 Protein Homology CDS 1021320 1022018 . - 0 ID=cds943;Parent=gene972;Dbxref=Genbank:WP_002223523.1;Name=WP_002223523.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002223523.1;transl_table=11 NC_005810.1 RefSeq gene 1022112 1022948 . - . ID=gene973;Name=YP_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04895;old_locus_tag=YP0946%2CYP_0946 NC_005810.1 Protein Homology CDS 1022112 1022948 . - 0 ID=cds944;Parent=gene973;Dbxref=Genbank:WP_002210795.1;Name=WP_002210795.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210795.1;transl_table=11 NC_005810.1 RefSeq gene 1022945 1024021 . - . ID=gene974;Name=YP_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04900;old_locus_tag=YP0947%2CYP_0947 NC_005810.1 Protein Homology CDS 1022945 1024021 . - 0 ID=cds945;Parent=gene974;Dbxref=Genbank:WP_002210794.1;Name=WP_002210794.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002210794.1;transl_table=11 NC_005810.1 RefSeq gene 1024021 1025622 . - . ID=gene975;Name=YP_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04905;old_locus_tag=YP0948%2CYP_0948 NC_005810.1 Protein Homology CDS 1024021 1025622 . - 0 ID=cds946;Parent=gene975;Dbxref=Genbank:WP_002210793.1;Name=WP_002210793.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_002210793.1;transl_table=11 NC_005810.1 RefSeq gene 1025746 1027014 . - . ID=gene976;Name=YP_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04910;old_locus_tag=YP0949%2CYP_0949 NC_005810.1 Protein Homology CDS 1025746 1027014 . - 0 ID=cds947;Parent=gene976;Dbxref=Genbank:WP_002210792.1;Name=WP_002210792.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1027376 1027410 . + . ID=id196;gbkey=repeat_region NC_005810.1 RefSeq gene 1027449 1027922 . - . ID=gene977;Name=YP_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04915;old_locus_tag=YP0950%2CYP_0950 NC_005810.1 Protein Homology CDS 1027449 1027922 . - 0 ID=cds948;Parent=gene977;Dbxref=Genbank:WP_011171781.1;Name=WP_011171781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171781.1;transl_table=11 NC_005810.1 RefSeq gene 1028168 1029049 . - . ID=gene978;Name=YP_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04920;old_locus_tag=YP0951%2CYP_0951 NC_005810.1 Protein Homology CDS 1028168 1029049 . - 0 ID=cds949;Parent=gene978;Dbxref=Genbank:WP_002210790.1;Name=WP_002210790.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210790.1;transl_table=11 NC_005810.1 RefSeq gene 1029052 1029912 . - . ID=gene979;Name=YP_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04925;old_locus_tag=YP0952%2CYP_0952 NC_005810.1 Protein Homology CDS 1029052 1029912 . - 0 ID=cds950;Parent=gene979;Dbxref=Genbank:WP_002210789.1;Name=WP_002210789.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210789.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1029920 1029951 . + . ID=id197;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1030015 1030944 . - . ID=gene980;Name=YP_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04930;old_locus_tag=YP0953%2CYP_0953 NC_005810.1 Protein Homology CDS 1030015 1030944 . - 0 ID=cds951;Parent=gene980;Dbxref=Genbank:WP_002210788.1;Name=WP_002210788.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_002210788.1;transl_table=11 NC_005810.1 RefSeq gene 1030981 1031817 . - . ID=gene981;Name=YP_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04935;old_locus_tag=YP0954%2CYP_0954 NC_005810.1 Protein Homology CDS 1030981 1031817 . - 0 ID=cds952;Parent=gene981;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11 NC_005810.1 RefSeq gene 1032025 1032273 . - . ID=gene982;Name=YP_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04940;old_locus_tag=YP0955 NC_005810.1 Protein Homology CDS 1032025 1032273 . - 0 ID=cds953;Parent=gene982;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11 NC_005810.1 RefSeq gene 1032458 1033561 . - . ID=gene983;Name=YP_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04945;old_locus_tag=YP0956%2CYP_0956 NC_005810.1 Protein Homology CDS 1032458 1033561 . - 0 ID=cds954;Parent=gene983;Dbxref=Genbank:WP_002210785.1;Name=WP_002210785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210785.1;transl_table=11 NC_005810.1 RefSeq gene 1033874 1034215 . + . ID=gene984;Name=YP_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04950;old_locus_tag=YP0958%2CYP_0958 NC_005810.1 Protein Homology CDS 1033874 1034215 . + 0 ID=cds955;Parent=gene984;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11 NC_005810.1 RefSeq gene 1034241 1034780 . - . ID=gene985;Name=YP_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04955;old_locus_tag=YP0959%2CYP_0959 NC_005810.1 Protein Homology CDS 1034241 1034780 . - 0 ID=cds956;Parent=gene985;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NC_005810.1 RefSeq gene 1034990 1036702 . + . ID=gene986;Name=YP_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04960;old_locus_tag=YP0960%2CYP_0960 NC_005810.1 Protein Homology CDS 1034990 1036702 . + 0 ID=cds957;Parent=gene986;Dbxref=Genbank:WP_002210781.1;Name=WP_002210781.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210781.1;transl_table=11 NC_005810.1 RefSeq gene 1036823 1037758 . - . ID=gene987;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YP_RS04965;old_locus_tag=YP0961%2CYP_0961 NC_005810.1 Protein Homology CDS 1036823 1037758 . - 0 ID=cds958;Parent=gene987;Dbxref=Genbank:WP_002210780.1;Name=WP_002210780.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_002210780.1;transl_table=11 NC_005810.1 RefSeq gene 1038097 1038276 . + . ID=gene988;Name=YP_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04970;old_locus_tag=YP0962%2CYP_0962 NC_005810.1 Protein Homology CDS 1038097 1038276 . + 0 ID=cds959;Parent=gene988;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11 NC_005810.1 RefSeq gene 1038350 1039288 . - . ID=gene989;Name=YP_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04975;old_locus_tag=YP0963%2CYP_0963 NC_005810.1 Protein Homology CDS 1038350 1039288 . - 0 ID=cds960;Parent=gene989;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11 NC_005810.1 RefSeq gene 1039588 1040517 . - . ID=gene990;Name=YP_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04980;old_locus_tag=YP0964%2CYP_0964 NC_005810.1 Protein Homology CDS 1039588 1040517 . - 0 ID=cds961;Parent=gene990;Dbxref=Genbank:WP_002210776.1;Name=WP_002210776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210776.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1040815 1042589 . + . ID=id198;gbkey=repeat_region NC_005810.1 RefSeq region 1040819 1041530 . - . ID=id199;gbkey=mobile_element NC_005810.1 RefSeq gene 1040927 1041385 . - . ID=gene991;Name=YP_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04985;old_locus_tag=YP0965%2CYP_0965 NC_005810.1 Protein Homology CDS 1040927 1041385 . - 0 ID=cds962;Parent=gene991;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 1041375 1041530 . - . ID=gene992;Name=YP_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS04990 NC_005810.1 Protein Homology CDS 1041375 1041530 . - 0 ID=cds963;Parent=gene992;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_005810.1 RefSeq gene 1041596 1042597 . - . ID=gene993;Name=YP_RS04995;end_range=1042597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS04995;old_locus_tag=YP0966;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 1041596 1042597 . - 0 ID=cds964;Parent=gene993;Note=this helicase is not essential cell growth;end_range=1042597,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-dependent RNA helicase RhlE;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1042515 1043105 . - . ID=gene994;Name=YP_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05000;old_locus_tag=YP0967 NC_005810.1 Protein Homology CDS 1042515 1043105 . - 0 ID=cds965;Parent=gene994;Dbxref=Genbank:WP_002228614.1;Name=WP_002228614.1;gbkey=CDS;product=transposase;protein_id=WP_002228614.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1043158 1044479 . + . ID=id200;gbkey=repeat_region NC_005810.1 RefSeq region 1043162 1044476 . - . ID=id201;gbkey=mobile_element NC_005810.1 RefSeq gene 1043197 1044405 . - . ID=gene995;Name=YP_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05005;old_locus_tag=YP0968%2CYP_0968 NC_005810.1 Protein Homology CDS 1043197 1044405 . - 0 ID=cds966;Parent=gene995;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 1044579 1044893 . - . ID=gene996;Name=YP_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05010;old_locus_tag=YP0969 NC_005810.1 Protein Homology CDS 1044579 1044893 . - 0 ID=cds967;Parent=gene996;Dbxref=Genbank:WP_002223532.1;Name=WP_002223532.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223532.1;transl_table=11 NC_005810.1 RefSeq gene 1044977 1045213 . - . ID=gene997;Name=YP_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05015 NC_005810.1 Protein Homology CDS 1044977 1045213 . - 0 ID=cds968;Parent=gene997;Dbxref=Genbank:WP_002228617.1;Name=WP_002228617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228617.1;transl_table=11 NC_005810.1 RefSeq gene 1045354 1045680 . - . ID=gene998;Name=YP_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05020 NC_005810.1 Protein Homology CDS 1045354 1045680 . - 0 ID=cds969;Parent=gene998;Dbxref=Genbank:WP_016256670.1;Name=WP_016256670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256670.1;transl_table=11 NC_005810.1 RefSeq gene 1045714 1045914 . - . ID=gene999;Name=YP_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22275;old_locus_tag=YP0971%2CYP_0971 NC_005810.1 Protein Homology CDS 1045714 1045914 . - 0 ID=cds970;Parent=gene999;Dbxref=Genbank:WP_002230690.1;Name=WP_002230690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230690.1;transl_table=11 NC_005810.1 RefSeq gene 1046732 1046998 . - . ID=gene1000;Name=YP_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05025 NC_005810.1 Protein Homology CDS 1046732 1046998 . - 0 ID=cds971;Parent=gene1000;Dbxref=Genbank:WP_002228622.1;Name=WP_002228622.1;gbkey=CDS;product=transposase;protein_id=WP_002228622.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1047066 1048121 . + . ID=id202;gbkey=repeat_region NC_005810.1 RefSeq gene 1047128 1048483 . - . ID=gene1001;Name=YP_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05030;old_locus_tag=YP0973%2CYP_0973 NC_005810.1 Protein Homology CDS 1047128 1048483 . - 0 ID=cds972;Parent=gene1001;Dbxref=Genbank:WP_002220152.1;Name=WP_002220152.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_002220152.1;transl_table=11 NC_005810.1 RefSeq gene 1048874 1049584 . + . ID=gene1002;Name=YP_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05035;old_locus_tag=YP0974%2CYP_0974 NC_005810.1 Protein Homology CDS 1048874 1049584 . + 0 ID=cds973;Parent=gene1002;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NC_005810.1 RefSeq gene 1049636 1050622 . + . ID=gene1003;Name=YP_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05040;old_locus_tag=YP0975%2CYP_0975 NC_005810.1 Protein Homology CDS 1049636 1050622 . + 0 ID=cds974;Parent=gene1003;Dbxref=Genbank:WP_002220156.1;Name=WP_002220156.1;gbkey=CDS;product=transporter;protein_id=WP_002220156.1;transl_table=11 NC_005810.1 RefSeq gene 1050636 1052378 . + . ID=gene1004;Name=YP_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05045;old_locus_tag=YP0976%2CYP_0976 NC_005810.1 Protein Homology CDS 1050636 1052378 . + 0 ID=cds975;Parent=gene1004;Dbxref=Genbank:WP_002220158.1;Name=WP_002220158.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002220158.1;transl_table=11 NC_005810.1 RefSeq gene 1052383 1053558 . + . ID=gene1005;Name=YP_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05050;old_locus_tag=YP0977%2CYP_0977 NC_005810.1 Protein Homology CDS 1052383 1053558 . + 0 ID=cds976;Parent=gene1005;Dbxref=Genbank:WP_002230687.1;Name=WP_002230687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230687.1;transl_table=11 NC_005810.1 RefSeq gene 1053571 1054677 . + . ID=gene1006;Name=YP_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05055;old_locus_tag=YP0978%2CYP_0978 NC_005810.1 Protein Homology CDS 1053571 1054677 . + 0 ID=cds977;Parent=gene1006;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11 NC_005810.1 RefSeq gene 1054716 1055042 . - . ID=gene1007;Name=YP_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05060;old_locus_tag=YP0979%2CYP_0979 NC_005810.1 Protein Homology CDS 1054716 1055042 . - 0 ID=cds978;Parent=gene1007;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11 NC_005810.1 RefSeq gene 1055053 1055280 . - . ID=gene1008;Name=YP_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05065;old_locus_tag=YP0980%2CYP_0980 NC_005810.1 Protein Homology CDS 1055053 1055280 . - 0 ID=cds979;Parent=gene1008;Dbxref=Genbank:WP_002220165.1;Name=WP_002220165.1;gbkey=CDS;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_002220165.1;transl_table=11 NC_005810.1 RefSeq gene 1055835 1056746 . + . ID=gene1009;Name=YP_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05070;old_locus_tag=YP0981%2CYP_0981 NC_005810.1 Protein Homology CDS 1055835 1056746 . + 0 ID=cds980;Parent=gene1009;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11 NC_005810.1 RefSeq gene 1056747 1057856 . - . ID=gene1010;Name=YP_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05075;old_locus_tag=YP0982%2CYP_0982 NC_005810.1 Protein Homology CDS 1056747 1057856 . - 0 ID=cds981;Parent=gene1010;Dbxref=Genbank:WP_002220169.1;Name=WP_002220169.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_002220169.1;transl_table=11 NC_005810.1 RefSeq gene 1058204 1059568 . - . ID=gene1011;Name=YP_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05080;old_locus_tag=YP0983%2CYP_0983 NC_005810.1 Protein Homology CDS 1058204 1059568 . - 0 ID=cds982;Parent=gene1011;Dbxref=Genbank:WP_002220170.1;Name=WP_002220170.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_002220170.1;transl_table=11 NC_005810.1 RefSeq gene 1059555 1061369 . - . ID=gene1012;Name=YP_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05085;old_locus_tag=YP0984%2CYP_0984 NC_005810.1 Protein Homology CDS 1059555 1061369 . - 0 ID=cds983;Parent=gene1012;Dbxref=Genbank:WP_002220171.1;Name=WP_002220171.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_002220171.1;transl_table=11 NC_005810.1 RefSeq gene 1061727 1062200 . + . ID=gene1013;Name=YP_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05090;old_locus_tag=YP0985%2CYP_0985 NC_005810.1 Protein Homology CDS 1061727 1062200 . + 0 ID=cds984;Parent=gene1013;Dbxref=Genbank:WP_002220173.1;Name=WP_002220173.1;gbkey=CDS;product=zinc resistance protein;protein_id=WP_002220173.1;transl_table=11 NC_005810.1 RefSeq gene 1062288 1062905 . - . ID=gene1014;Name=YP_RS05095;end_range=1062905,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS05095;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 1062288 1062905 . - 0 ID=cds985;Parent=gene1014;end_range=1062905,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 1062894 1063612 . + . ID=id203;gbkey=repeat_region NC_005810.1 RefSeq region 1062898 1063609 . - . ID=id204;gbkey=mobile_element NC_005810.1 RefSeq gene 1063006 1063464 . - . ID=gene1015;Name=YP_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05100;old_locus_tag=YP0987%2CYP_0987 NC_005810.1 Protein Homology CDS 1063006 1063464 . - 0 ID=cds986;Parent=gene1015;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 1063610 1064254 . - . ID=gene1016;Name=YP_RS05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS05105;partial=true;pseudo=true;start_range=.,1063610 NC_005810.1 Protein Homology CDS 1063610 1064254 . - 0 ID=cds987;Parent=gene1016;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;start_range=.,1063610;transl_table=11 NC_005810.1 RefSeq gene 1064393 1065256 . - . ID=gene1017;Name=YP_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05110;old_locus_tag=YP0988%2CYP_0988 NC_005810.1 Protein Homology CDS 1064393 1065256 . - 0 ID=cds988;Parent=gene1017;Dbxref=Genbank:WP_002214195.1;Name=WP_002214195.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_002214195.1;transl_table=11 NC_005810.1 RefSeq gene 1065602 1066450 . + . ID=gene1018;Name=YP_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05115;old_locus_tag=YP0989%2CYP_0989 NC_005810.1 Protein Homology CDS 1065602 1066450 . + 0 ID=cds989;Parent=gene1018;Dbxref=Genbank:WP_002214197.1;Name=WP_002214197.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002214197.1;transl_table=11 NC_005810.1 RefSeq gene 1066488 1067381 . - . ID=gene1019;Name=YP_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05120;old_locus_tag=YP0990%2CYP_0990 NC_005810.1 Protein Homology CDS 1066488 1067381 . - 0 ID=cds990;Parent=gene1019;Dbxref=Genbank:WP_002214199.1;Name=WP_002214199.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214199.1;transl_table=11 NC_005810.1 RefSeq gene 1067613 1069661 . - . ID=gene1020;Name=YP_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05125;old_locus_tag=YP0991%2CYP_0991 NC_005810.1 Protein Homology CDS 1067613 1069661 . - 0 ID=cds991;Parent=gene1020;Dbxref=Genbank:WP_002228035.1;Name=WP_002228035.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_002228035.1;transl_table=11 NC_005810.1 RefSeq gene 1070026 1070622 . + . ID=gene1021;Name=YP_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05130;old_locus_tag=YP0992%2CYP_0992 NC_005810.1 Protein Homology CDS 1070026 1070622 . + 0 ID=cds992;Parent=gene1021;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11 NC_005810.1 RefSeq gene 1070680 1072152 . + . ID=gene1022;Name=YP_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05135;old_locus_tag=YP0993%2CYP_0993 NC_005810.1 Protein Homology CDS 1070680 1072152 . + 0 ID=cds993;Parent=gene1022;Dbxref=Genbank:WP_002218281.1;Name=WP_002218281.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_002218281.1;transl_table=11 NC_005810.1 RefSeq gene 1072175 1073878 . + . ID=gene1023;Name=YP_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05140;old_locus_tag=YP0994%2CYP_0994 NC_005810.1 Protein Homology CDS 1072175 1073878 . + 0 ID=cds994;Parent=gene1023;Dbxref=Genbank:WP_002220180.1;Name=WP_002220180.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=oxygen-dependent choline dehydrogenase;protein_id=WP_002220180.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1073995 1074718 . + . ID=id205;gbkey=repeat_region NC_005810.1 RefSeq region 1073999 1074710 . - . ID=id206;gbkey=mobile_element NC_005810.1 RefSeq gene 1074107 1074565 . - . ID=gene1024;Name=YP_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05145;old_locus_tag=YP0995%2CYP_0995 NC_005810.1 Protein Homology CDS 1074107 1074565 . - 0 ID=cds995;Parent=gene1024;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 1074555 1074725 . - . ID=gene1025;Name=YP_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05150 NC_005810.1 Protein Homology CDS 1074555 1074725 . - 0 ID=cds996;Parent=gene1025;Dbxref=Genbank:WP_025470755.1;Name=WP_025470755.1;gbkey=CDS;product=transposase;protein_id=WP_025470755.1;transl_table=11 NC_005810.1 RefSeq gene 1074800 1075510 . - . ID=gene1026;Name=YP_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05155;old_locus_tag=YP0996%2CYP_0996 NC_005810.1 Protein Homology CDS 1074800 1075510 . - 0 ID=cds997;Parent=gene1026;Dbxref=Genbank:WP_002210775.1;Name=WP_002210775.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210775.1;transl_table=11 NC_005810.1 RefSeq gene 1075653 1076105 . - . ID=gene1027;Name=YP_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05160;old_locus_tag=YP0997%2CYP_0997 NC_005810.1 Protein Homology CDS 1075653 1076105 . - 0 ID=cds998;Parent=gene1027;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11 NC_005810.1 RefSeq gene 1076108 1076353 . - . ID=gene1028;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YP_RS05165;old_locus_tag=YP0998%2CYP_0998 NC_005810.1 Protein Homology CDS 1076108 1076353 . - 0 ID=cds999;Parent=gene1028;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11 NC_005810.1 RefSeq gene 1076350 1076829 . - . ID=gene1029;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YP_RS05170;old_locus_tag=YP0999%2CYP_0999 NC_005810.1 Protein Homology CDS 1076350 1076829 . - 0 ID=cds1000;Parent=gene1029;Dbxref=Genbank:WP_002210772.1;Name=WP_002210772.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_002210772.1;transl_table=11 NC_005810.1 RefSeq gene 1077052 1078032 . - . ID=gene1030;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YP_RS05175;old_locus_tag=YP1000%2CYP_1000 NC_005810.1 Protein Homology CDS 1077052 1078032 . - 0 ID=cds1001;Parent=gene1030;Dbxref=Genbank:WP_002210771.1;Name=WP_002210771.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_002210771.1;transl_table=11 NC_005810.1 RefSeq gene 1078284 1078430 . + . ID=gene1031;Name=YP_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05180 NC_005810.1 Protein Homology CDS 1078284 1078430 . + 0 ID=cds1002;Parent=gene1031;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11 NC_005810.1 RefSeq gene 1078564 1079487 . + . ID=gene1032;Name=YP_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05185;old_locus_tag=YP1001%2CYP_1001 NC_005810.1 Protein Homology CDS 1078564 1079487 . + 0 ID=cds1003;Parent=gene1032;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11 NC_005810.1 RefSeq gene 1079618 1079863 . - . ID=gene1033;Name=YP_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05190;old_locus_tag=YP1002%2CYP_1002 NC_005810.1 Protein Homology CDS 1079618 1079863 . - 0 ID=cds1004;Parent=gene1033;Dbxref=Genbank:WP_002210768.1;Name=WP_002210768.1;gbkey=CDS;product=transporter;protein_id=WP_002210768.1;transl_table=11 NC_005810.1 RefSeq gene 1080155 1082170 . - . ID=gene1034;Name=YP_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05195;old_locus_tag=YP1003%2CYP_1003 NC_005810.1 Protein Homology CDS 1080155 1082170 . - 0 ID=cds1005;Parent=gene1034;Dbxref=Genbank:WP_002210767.1;Name=WP_002210767.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_002210767.1;transl_table=11 NC_005810.1 RefSeq gene 1083261 1083971 . + . ID=gene1035;Name=YP_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05200;old_locus_tag=YP1005%2CYP_1005 NC_005810.1 Protein Homology CDS 1083261 1083971 . + 0 ID=cds1006;Parent=gene1035;Dbxref=Genbank:WP_002210766.1;Name=WP_002210766.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210766.1;transl_table=11 NC_005810.1 RefSeq gene 1084123 1084845 . - . ID=gene1036;Name=YP_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05205;old_locus_tag=YP1006%2CYP_1006 NC_005810.1 Protein Homology CDS 1084123 1084845 . - 0 ID=cds1007;Parent=gene1036;Dbxref=Genbank:WP_002216554.1;Name=WP_002216554.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002216554.1;transl_table=11 NC_005810.1 RefSeq gene 1084838 1085641 . - . ID=gene1037;Name=YP_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05210;old_locus_tag=YP1007%2CYP_1007 NC_005810.1 Protein Homology CDS 1084838 1085641 . - 0 ID=cds1008;Parent=gene1037;Dbxref=Genbank:WP_002210764.1;Name=WP_002210764.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_002210764.1;transl_table=11 NC_005810.1 RefSeq gene 1085625 1086776 . - . ID=gene1038;Name=YP_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05215;old_locus_tag=YP1008%2CYP_1008 NC_005810.1 Protein Homology CDS 1085625 1086776 . - 0 ID=cds1009;Parent=gene1038;Dbxref=Genbank:WP_002210763.1;Name=WP_002210763.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_002210763.1;transl_table=11 NC_005810.1 RefSeq gene 1086776 1087813 . - . ID=gene1039;Name=YP_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05220;old_locus_tag=YP1009%2CYP_1009 NC_005810.1 Protein Homology CDS 1086776 1087813 . - 0 ID=cds1010;Parent=gene1039;Dbxref=Genbank:WP_002210762.1;Name=WP_002210762.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_002210762.1;transl_table=11 NC_005810.1 RefSeq gene 1087912 1089192 . + . ID=gene1040;Name=YP_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05225;old_locus_tag=YP1010%2CYP_1010 NC_005810.1 Protein Homology CDS 1087912 1089192 . + 0 ID=cds1011;Parent=gene1040;Dbxref=Genbank:WP_002220188.1;Name=WP_002220188.1;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_002220188.1;transl_table=11 NC_005810.1 RefSeq gene 1089377 1090381 . - . ID=gene1041;Name=YP_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05230;old_locus_tag=YP1011%2CYP_1011 NC_005810.1 Protein Homology CDS 1089377 1090381 . - 0 ID=cds1012;Parent=gene1041;Dbxref=Genbank:WP_002210760.1;Name=WP_002210760.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_002210760.1;transl_table=11 NC_005810.1 RefSeq gene 1090672 1091493 . + . ID=gene1042;Name=YP_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05235;old_locus_tag=YP1012%2CYP_1012 NC_005810.1 Protein Homology CDS 1090672 1091493 . + 0 ID=cds1013;Parent=gene1042;Dbxref=Genbank:WP_002210759.1;Name=WP_002210759.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_002210759.1;transl_table=11 NC_005810.1 RefSeq gene 1091549 1092628 . - . ID=gene1043;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YP_RS05240;old_locus_tag=YP1013%2CYP_1013 NC_005810.1 Protein Homology CDS 1091549 1092628 . - 0 ID=cds1014;Parent=gene1043;Dbxref=Genbank:WP_002210758.1;Name=WP_002210758.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_002210758.1;transl_table=11 NC_005810.1 RefSeq gene 1092622 1093317 . - . ID=gene1044;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YP_RS05245;old_locus_tag=YP1014%2CYP_1014 NC_005810.1 Protein Homology CDS 1092622 1093317 . - 0 ID=cds1015;Parent=gene1044;Dbxref=Genbank:WP_002210757.1;Name=WP_002210757.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_002210757.1;transl_table=11 NC_005810.1 RefSeq gene 1093317 1094096 . - . ID=gene1045;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YP_RS05250;old_locus_tag=YP1015%2CYP_1015 NC_005810.1 Protein Homology CDS 1093317 1094096 . - 0 ID=cds1016;Parent=gene1045;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NC_005810.1 RefSeq gene 1094331 1094483 . - . ID=gene1046;Name=YP_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05255;old_locus_tag=YP1016%2CYP_1016 NC_005810.1 Protein Homology CDS 1094331 1094483 . - 0 ID=cds1017;Parent=gene1046;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1094635 1094719 . + . ID=id207;Note=degenerate repeat region containing 5 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1094766 1095557 . + . ID=gene1047;Name=YP_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05260;old_locus_tag=YP1017%2CYP_1017 NC_005810.1 Protein Homology CDS 1094766 1095557 . + 0 ID=cds1018;Parent=gene1047;Dbxref=Genbank:WP_002210754.1;Name=WP_002210754.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_002210754.1;transl_table=11 NC_005810.1 RefSeq gene 1095667 1097157 . + . ID=gene1048;Name=YP_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05265;old_locus_tag=YP1018%2CYP_1018 NC_005810.1 Protein Homology CDS 1095667 1097157 . + 0 ID=cds1019;Parent=gene1048;Dbxref=Genbank:WP_002210753.1;Name=WP_002210753.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_002210753.1;transl_table=11 NC_005810.1 RefSeq gene 1097191 1097319 . + . ID=gene1049;Name=YP_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05270 NC_005810.1 Protein Homology CDS 1097191 1097319 . + 0 ID=cds1020;Parent=gene1049;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11 NC_005810.1 RefSeq gene 1097374 1098192 . + . ID=gene1050;Name=YP_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05275;old_locus_tag=YP1019%2CYP_1019 NC_005810.1 Protein Homology CDS 1097374 1098192 . + 0 ID=cds1021;Parent=gene1050;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11 NC_005810.1 RefSeq gene 1098552 1099568 . + . ID=gene1051;Name=YP_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05280;old_locus_tag=YP1020%2CYP_1020 NC_005810.1 Protein Homology CDS 1098552 1099568 . + 0 ID=cds1022;Parent=gene1051;Dbxref=Genbank:WP_002230680.1;Name=WP_002230680.1;gbkey=CDS;product=UDP-galactose-4-epimerase;protein_id=WP_002230680.1;transl_table=11 NC_005810.1 RefSeq gene 1099578 1100630 . + . ID=gene1052;Name=YP_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05285;old_locus_tag=YP1021%2CYP_1021 NC_005810.1 Protein Homology CDS 1099578 1100630 . + 0 ID=cds1023;Parent=gene1052;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NC_005810.1 RefSeq gene 1100627 1101778 . + . ID=gene1053;Name=YP_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05290;old_locus_tag=YP1022%2CYP_1022 NC_005810.1 Protein Homology CDS 1100627 1101778 . + 0 ID=cds1024;Parent=gene1053;Dbxref=Genbank:WP_002210748.1;Name=WP_002210748.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NC_005810.1 RefSeq gene 1101772 1101924 . + . ID=gene1054;Name=YP_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05295 NC_005810.1 Protein Homology CDS 1101772 1101924 . + 0 ID=cds1025;Parent=gene1054;Dbxref=Genbank:WP_002216814.1;Name=WP_002216814.1;gbkey=CDS;product=aldose 1-epimerase;protein_id=WP_002216814.1;transl_table=11 NC_005810.1 RefSeq gene 1101945 1102841 . + . ID=gene1055;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YP_RS05300;old_locus_tag=YP1023 NC_005810.1 Protein Homology CDS 1101945 1102841 . + 0 ID=cds1026;Parent=gene1055;Dbxref=Genbank:WP_002216812.1;Name=WP_002216812.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_002216812.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1102836 1102865 . + . ID=id208;Note=degenerate repeat region containing 2 copies of a 15bp unit . Contains Aldose 1-epimerase (Interpro|IPR001823%2C (GO:0006012));gbkey=repeat_region;gene=galM NC_005810.1 RefSeq gene 1103134 1103469 . + . ID=gene1056;Name=YP_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05305;old_locus_tag=YP1024%2CYP_1024 NC_005810.1 Protein Homology CDS 1103134 1103469 . + 0 ID=cds1027;Parent=gene1056;Dbxref=Genbank:WP_002210747.1;Name=WP_002210747.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_002210747.1;transl_table=11 NC_005810.1 RefSeq gene 1103816 1104568 . + . ID=gene1057;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YP_RS05310;old_locus_tag=YP1025%2CYP_1025 NC_005810.1 Protein Homology CDS 1103816 1104568 . + 0 ID=cds1028;Parent=gene1057;Dbxref=Genbank:WP_002210746.1;Name=WP_002210746.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NC_005810.1 RefSeq gene 1104750 1105802 . - . ID=gene1058;Name=YP_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05315;old_locus_tag=YP1026%2CYP_1026 NC_005810.1 Protein Homology CDS 1104750 1105802 . - 0 ID=cds1029;Parent=gene1058;Dbxref=Genbank:WP_002223549.1;Name=WP_002223549.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002223549.1;transl_table=11 NC_005810.1 RefSeq gene 1106251 1107189 . + . ID=gene1059;Name=YP_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05320;old_locus_tag=YP1027%2CYP_1027 NC_005810.1 Protein Homology CDS 1106251 1107189 . + 0 ID=cds1030;Parent=gene1059;Dbxref=Genbank:WP_002210743.1;Name=WP_002210743.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_002210743.1;transl_table=11 NC_005810.1 RefSeq gene 1107304 1108029 . - . ID=gene1060;Name=YP_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05325;old_locus_tag=YP1028%2CYP_1028 NC_005810.1 Protein Homology CDS 1107304 1108029 . - 0 ID=cds1031;Parent=gene1060;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NC_005810.1 RefSeq gene 1108151 1109212 . - . ID=gene1061;Name=YP_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05330;old_locus_tag=YP1029%2CYP_1029 NC_005810.1 Protein Homology CDS 1108151 1109212 . - 0 ID=cds1032;Parent=gene1061;Dbxref=Genbank:WP_002210741.1;Name=WP_002210741.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002210741.1;transl_table=11 NC_005810.1 RefSeq gene 1109289 1109531 . + . ID=gene1062;Name=YP_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05335 NC_005810.1 Protein Homology CDS 1109289 1109531 . + 0 ID=cds1033;Parent=gene1062;Dbxref=Genbank:WP_002217022.1;Name=WP_002217022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217022.1;transl_table=11 NC_005810.1 RefSeq gene 1109581 1109650 . - . ID=gene1063;Name=YP_RS05340;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05340;old_locus_tag=tRNA-Lys_1%2CYP_t19 NC_005810.1 tRNAscan-SE tRNA 1109581 1109650 . - . ID=rna26;Parent=gene1063;anticodon=(pos:complement(1109616..1109618));gbkey=tRNA;product=tRNA-Lys NC_005810.1 tRNAscan-SE exon 1109581 1109650 . - . ID=id209;Parent=rna26;anticodon=(pos:complement(1109616..1109618));gbkey=tRNA;product=tRNA-Lys NC_005810.1 RefSeq repeat_region 1109594 1109857 . + . ID=id210;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1109594 1109799 . + . ID=id211;Note=degenerate repeat region containing 2 copies of a 103bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1109679 1109754 . - . ID=gene1064;Name=YP_RS05345;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05345;old_locus_tag=tRNA-Lys_2%2CYP_t20 NC_005810.1 tRNAscan-SE tRNA 1109679 1109754 . - . ID=rna27;Parent=gene1064;anticodon=(pos:complement(1109719..1109721));gbkey=tRNA;product=tRNA-Lys NC_005810.1 tRNAscan-SE exon 1109679 1109754 . - . ID=id212;Parent=rna27;anticodon=(pos:complement(1109719..1109721));gbkey=tRNA;product=tRNA-Lys NC_005810.1 RefSeq gene 1109782 1109857 . - . ID=gene1065;Name=YP_RS05350;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05350;old_locus_tag=tRNA-Lys_3%2CYP_t21 NC_005810.1 tRNAscan-SE tRNA 1109782 1109857 . - . ID=rna28;Parent=gene1065;anticodon=(pos:complement(1109822..1109824));gbkey=tRNA;product=tRNA-Lys NC_005810.1 tRNAscan-SE exon 1109782 1109857 . - . ID=id213;Parent=rna28;anticodon=(pos:complement(1109822..1109824));gbkey=tRNA;product=tRNA-Lys NC_005810.1 RefSeq gene 1110048 1110857 . - . ID=gene1066;Name=YP_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05355;old_locus_tag=YP1030%2CYP_1030 NC_005810.1 Protein Homology CDS 1110048 1110857 . - 0 ID=cds1034;Parent=gene1066;Dbxref=Genbank:WP_002220051.1;Name=WP_002220051.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=WP_002220051.1;transl_table=11 NC_005810.1 RefSeq gene 1110867 1111373 . - . ID=gene1067;Name=YP_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05360;old_locus_tag=YP1031%2CYP_1031 NC_005810.1 Protein Homology CDS 1110867 1111373 . - 0 ID=cds1035;Parent=gene1067;Dbxref=Genbank:WP_002210739.1;Name=WP_002210739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210739.1;transl_table=11 NC_005810.1 RefSeq gene 1111424 1112716 . - . ID=gene1068;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YP_RS05365;old_locus_tag=YP1032%2CYP_1032 NC_005810.1 Protein Homology CDS 1111424 1112716 . - 0 ID=cds1036;Parent=gene1068;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11 NC_005810.1 RefSeq gene 1112836 1114026 . - . ID=gene1069;Name=YP_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05370;old_locus_tag=YP1033%2CYP_1033 NC_005810.1 Protein Homology CDS 1112836 1114026 . - 0 ID=cds1037;Parent=gene1069;Dbxref=Genbank:WP_011171790.1;Name=WP_011171790.1;gbkey=CDS;product=cell envelope integrity/translocation protein TolA;protein_id=WP_011171790.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1113428 1113475 . + . ID=id214;Note=exact repeat region containing 2 copies of a 24 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1114138 1114566 . - . ID=gene1070;Name=YP_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05375;old_locus_tag=YP1034%2CYP_1034 NC_005810.1 Protein Homology CDS 1114138 1114566 . - 0 ID=cds1038;Parent=gene1070;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11 NC_005810.1 RefSeq gene 1114579 1115265 . - . ID=gene1071;Name=YP_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05380;old_locus_tag=YP1035%2CYP_1035 NC_005810.1 Protein Homology CDS 1114579 1115265 . - 0 ID=cds1039;Parent=gene1071;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11 NC_005810.1 RefSeq gene 1115265 1115666 . - . ID=gene1072;Name=YP_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05385;old_locus_tag=YP1036%2CYP_1036 NC_005810.1 Protein Homology CDS 1115265 1115666 . - 0 ID=cds1040;Parent=gene1072;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11 NC_005810.1 RefSeq gene 1115798 1116085 . - . ID=gene1073;Name=YP_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05390;old_locus_tag=YP1037%2CYP_1037 NC_005810.1 Protein Homology CDS 1115798 1116085 . - 0 ID=cds1041;Parent=gene1073;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11 NC_005810.1 RefSeq gene 1116075 1116209 . - . ID=gene1074;Name=YP_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05395 NC_005810.1 Protein Homology CDS 1116075 1116209 . - 0 ID=cds1042;Parent=gene1074;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11 NC_005810.1 RefSeq gene 1116222 1117361 . - . ID=gene1075;Name=YP_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05400;old_locus_tag=YP1038%2CYP_1038 NC_005810.1 Protein Homology CDS 1116222 1117361 . - 0 ID=cds1043;Parent=gene1075;Dbxref=Genbank:WP_011171791.1;Name=WP_011171791.1;gbkey=CDS;product=cytochrome BD oxidase subunit II;protein_id=WP_011171791.1;transl_table=11 NC_005810.1 RefSeq gene 1117376 1118944 . - . ID=gene1076;Name=YP_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05405;old_locus_tag=YP1039%2CYP_1039 NC_005810.1 Protein Homology CDS 1117376 1118944 . - 0 ID=cds1044;Parent=gene1076;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NC_005810.1 RefSeq gene 1119711 1120583 . - . ID=gene1077;Name=YP_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05410;old_locus_tag=YP1040%2CYP_1040 NC_005810.1 Protein Homology CDS 1119711 1120583 . - 0 ID=cds1045;Parent=gene1077;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NC_005810.1 RefSeq gene 1120583 1121749 . - . ID=gene1078;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YP_RS05415;old_locus_tag=YP1041%2CYP_1041 NC_005810.1 Protein Homology CDS 1120583 1121749 . - 0 ID=cds1046;Parent=gene1078;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NC_005810.1 RefSeq gene 1121862 1123085 . - . ID=gene1079;Name=YP_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05420;old_locus_tag=YP1042%2CYP_1042 NC_005810.1 Protein Homology CDS 1121862 1123085 . - 0 ID=cds1047;Parent=gene1079;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NC_005810.1 RefSeq gene 1123115 1125922 . - . ID=gene1080;Name=YP_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05425;old_locus_tag=YP1043%2CYP_1043 NC_005810.1 Protein Homology CDS 1123115 1125922 . - 0 ID=cds1048;Parent=gene1080;Dbxref=Genbank:WP_002210726.1;Name=WP_002210726.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=WP_002210726.1;transl_table=11 NC_005810.1 RefSeq gene 1126278 1126994 . - . ID=gene1081;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YP_RS05430;old_locus_tag=YP1044%2CYP_1044 NC_005810.1 Protein Homology CDS 1126278 1126994 . - 0 ID=cds1049;Parent=gene1081;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NC_005810.1 RefSeq gene 1127044 1128810 . - . ID=gene1082;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YP_RS05435;old_locus_tag=YP1045%2CYP_1045 NC_005810.1 Protein Homology CDS 1127044 1128810 . - 0 ID=cds1050;Parent=gene1082;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NC_005810.1 RefSeq gene 1128811 1129158 . - . ID=gene1083;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YP_RS05440;old_locus_tag=YP1046%2CYP_1046 NC_005810.1 Protein Homology CDS 1128811 1129158 . - 0 ID=cds1051;Parent=gene1083;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11 NC_005810.1 RefSeq gene 1129152 1129541 . - . ID=gene1084;Name=YP_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05445;old_locus_tag=YP1047%2CYP_1047 NC_005810.1 Protein Homology CDS 1129152 1129541 . - 0 ID=cds1052;Parent=gene1084;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11 NC_005810.1 RefSeq gene 1130251 1131531 . + . ID=gene1085;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=YP_RS05450;old_locus_tag=YP1048%2CYP_1048 NC_005810.1 Protein Homology CDS 1130251 1131531 . + 0 ID=cds1053;Parent=gene1085;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11 NC_005810.1 RefSeq gene 1131639 1132217 . - . ID=gene1086;Name=YP_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05455;old_locus_tag=YP1049%2CYP_1049 NC_005810.1 Protein Homology CDS 1131639 1132217 . - 0 ID=cds1054;Parent=gene1086;Dbxref=Genbank:WP_002224622.1;Name=WP_002224622.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002224622.1;transl_table=11 NC_005810.1 RefSeq gene 1132341 1133222 . + . ID=gene1087;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=YP_RS05460;old_locus_tag=YP1050%2CYP_1050 NC_005810.1 Protein Homology CDS 1132341 1133222 . + 0 ID=cds1055;Parent=gene1087;Dbxref=Genbank:WP_002210719.1;Name=WP_002210719.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_002210719.1;transl_table=11 NC_005810.1 RefSeq gene 1133309 1134970 . + . ID=gene1088;Name=YP_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05465;old_locus_tag=YP1051%2CYP_1051 NC_005810.1 Protein Homology CDS 1133309 1134970 . + 0 ID=cds1056;Parent=gene1088;Dbxref=Genbank:WP_002210718.1;Name=WP_002210718.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_002210718.1;transl_table=11 NC_005810.1 RefSeq gene 1135084 1135425 . + . ID=gene1089;Name=YP_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05470;old_locus_tag=YP1052%2CYP_1052 NC_005810.1 Protein Homology CDS 1135084 1135425 . + 0 ID=cds1057;Parent=gene1089;Dbxref=Genbank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_002210717.1;transl_table=11 NC_005810.1 RefSeq gene 1135575 1135859 . - . ID=gene1090;Name=YP_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05475;old_locus_tag=YP1053%2CYP_1053 NC_005810.1 Protein Homology CDS 1135575 1135859 . - 0 ID=cds1058;Parent=gene1090;Dbxref=Genbank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;product=protein RnfH;protein_id=WP_002210716.1;transl_table=11 NC_005810.1 RefSeq gene 1135852 1136286 . - . ID=gene1091;Name=YP_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05480;old_locus_tag=YP1054%2CYP_1054 NC_005810.1 Protein Homology CDS 1135852 1136286 . - 0 ID=cds1059;Parent=gene1091;Dbxref=Genbank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210715.1;transl_table=11 NC_005810.1 RefSeq gene 1136447 1136929 . + . ID=gene1092;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YP_RS05485;old_locus_tag=YP1055%2CYP_1055 NC_005810.1 Protein Homology CDS 1136447 1136929 . + 0 ID=cds1060;Parent=gene1092;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11 NC_005810.1 RefSeq gene 1137374 1137574 . + . ID=gene1093;Name=YP_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05490 NC_005810.1 Protein Homology CDS 1137374 1137574 . + 0 ID=cds1061;Parent=gene1093;Dbxref=Genbank:WP_002215944.1;Name=WP_002215944.1;gbkey=CDS;product=invasin;protein_id=WP_002215944.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1137412 1138133 . + . ID=id215;gbkey=repeat_region NC_005810.1 RefSeq region 1137419 1138130 . + . ID=id216;gbkey=mobile_element NC_005810.1 RefSeq gene 1137564 1138022 . + . ID=gene1094;Name=YP_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05495;old_locus_tag=YP1056%2CYP_1056 NC_005810.1 Protein Homology CDS 1137564 1138022 . + 0 ID=cds1062;Parent=gene1094;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 1138246 1139445 . + . ID=gene1095;Name=YP_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05500;old_locus_tag=YP1057%2CYP_1057 NC_005810.1 Protein Homology CDS 1138246 1139445 . + 0 ID=cds1063;Parent=gene1095;Dbxref=Genbank:WP_002210713.1;Name=WP_002210713.1;gbkey=CDS;product=integrase;protein_id=WP_002210713.1;transl_table=11 NC_005810.1 RefSeq gene 1139524 1140612 . + . ID=gene1096;Name=YP_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05505;old_locus_tag=YP1058%2CYP_1058 NC_005810.1 Protein Homology CDS 1139524 1140612 . + 0 ID=cds1064;Parent=gene1096;Dbxref=Genbank:WP_002210712.1;Name=WP_002210712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210712.1;transl_table=11 NC_005810.1 RefSeq gene 1140663 1142333 . + . ID=gene1097;Name=YP_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05510;old_locus_tag=YP1059%2CYP_1059 NC_005810.1 Protein Homology CDS 1140663 1142333 . + 0 ID=cds1065;Parent=gene1097;Dbxref=Genbank:WP_002215945.1;Name=WP_002215945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215945.1;transl_table=11 NC_005810.1 RefSeq gene 1142495 1142722 . - . ID=gene1098;Name=YP_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05515;old_locus_tag=YP1060%2CYP_1060 NC_005810.1 Protein Homology CDS 1142495 1142722 . - 0 ID=cds1066;Parent=gene1098;Dbxref=Genbank:WP_002215946.1;Name=WP_002215946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215946.1;transl_table=11 NC_005810.1 RefSeq gene 1142953 1143126 . + . ID=gene1099;Name=YP_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05520;old_locus_tag=YP1061%2CYP_1061 NC_005810.1 Protein Homology CDS 1142953 1143126 . + 0 ID=cds1067;Parent=gene1099;Dbxref=Genbank:WP_002215947.1;Name=WP_002215947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215947.1;transl_table=11 NC_005810.1 RefSeq gene 1143185 1143508 . + . ID=gene1100;Name=YP_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05525;old_locus_tag=YP1062%2CYP_1062 NC_005810.1 Protein Homology CDS 1143185 1143508 . + 0 ID=cds1068;Parent=gene1100;Dbxref=Genbank:WP_011566205.1;Name=WP_011566205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011566205.1;transl_table=11 NC_005810.1 RefSeq gene 1143530 1144417 . + . ID=gene1101;Name=YP_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05530;old_locus_tag=YP1063%2CYP_1063 NC_005810.1 Protein Homology CDS 1143530 1144417 . + 0 ID=cds1069;Parent=gene1101;Dbxref=Genbank:WP_002210710.1;Name=WP_002210710.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210710.1;transl_table=11 NC_005810.1 RefSeq gene 1144410 1144610 . + . ID=gene1102;Name=YP_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05535;old_locus_tag=YP1064%2CYP_1064 NC_005810.1 Protein Homology CDS 1144410 1144610 . + 0 ID=cds1070;Parent=gene1102;Dbxref=Genbank:WP_002210709.1;Name=WP_002210709.1;gbkey=CDS;product=dipicolinate synthase;protein_id=WP_002210709.1;transl_table=11 NC_005810.1 RefSeq gene 1144610 1145152 . + . ID=gene1103;Name=YP_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05540;old_locus_tag=YP1065%2CYP_1065 NC_005810.1 Protein Homology CDS 1144610 1145152 . + 0 ID=cds1071;Parent=gene1103;Dbxref=Genbank:WP_002215949.1;Name=WP_002215949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215949.1;transl_table=11 NC_005810.1 RefSeq gene 1145145 1146104 . + . ID=gene1104;Name=YP_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05545;old_locus_tag=YP1066%2CYP_1066 NC_005810.1 Protein Homology CDS 1145145 1146104 . + 0 ID=cds1072;Parent=gene1104;Dbxref=Genbank:WP_002215950.1;Name=WP_002215950.1;gbkey=CDS;product=DNA primase;protein_id=WP_002215950.1;transl_table=11 NC_005810.1 RefSeq gene 1146101 1147189 . + . ID=gene1105;Name=YP_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05550;old_locus_tag=YP1067%2CYP_1067 NC_005810.1 Protein Homology CDS 1146101 1147189 . + 0 ID=cds1073;Parent=gene1105;Dbxref=Genbank:WP_002210707.1;Name=WP_002210707.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210707.1;transl_table=11 NC_005810.1 RefSeq gene 1147538 1147852 . - . ID=gene1106;Name=YP_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05555;old_locus_tag=YP1069%2CYP_1069 NC_005810.1 Protein Homology CDS 1147538 1147852 . - 0 ID=cds1074;Parent=gene1106;Dbxref=Genbank:WP_002210705.1;Name=WP_002210705.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210705.1;transl_table=11 NC_005810.1 RefSeq gene 1147858 1148175 . - . ID=gene1107;Name=YP_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05560;old_locus_tag=YP1070%2CYP_1070 NC_005810.1 Protein Homology CDS 1147858 1148175 . - 0 ID=cds1075;Parent=gene1107;Dbxref=Genbank:WP_002215951.1;Name=WP_002215951.1;gbkey=CDS;product=addiction module protein;protein_id=WP_002215951.1;transl_table=11 NC_005810.1 RefSeq gene 1148590 1148766 . + . ID=gene1108;Name=YP_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05565 NC_005810.1 Protein Homology CDS 1148590 1148766 . + 0 ID=cds1076;Parent=gene1108;Dbxref=Genbank:WP_002210704.1;Name=WP_002210704.1;gbkey=CDS;product=integrase;protein_id=WP_002210704.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1148689 1150649 . + . ID=id217;gbkey=repeat_region NC_005810.1 RefSeq region 1148694 1150646 . + . ID=id218;gbkey=mobile_element NC_005810.1 RefSeq gene 1148780 1149802 . + . ID=gene1109;Name=YP_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05570;old_locus_tag=YP1072%2CYP_1072 NC_005810.1 Protein Homology CDS 1148780 1149802 . + 0 ID=cds1077;Parent=gene1109;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 1149802 1150581 . + . ID=gene1110;Name=YP_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05575;old_locus_tag=YP1073%2CYP_1073 NC_005810.1 Protein Homology CDS 1149802 1150581 . + 0 ID=cds1078;Parent=gene1110;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 1150594 1151058 . + . ID=gene1111;Name=YP_RS05580;end_range=1151058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS05580;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 1150594 1151058 . + 0 ID=cds1079;Parent=gene1111;end_range=1151058,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1151128 1151391 . + . ID=gene1112;Name=YP_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05585;old_locus_tag=YP1074%2CYP_1074 NC_005810.1 Protein Homology CDS 1151128 1151391 . + 0 ID=cds1080;Parent=gene1112;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11 NC_005810.1 RefSeq gene 1151474 1151659 . + . ID=gene1113;Name=YP_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05590;old_locus_tag=YP1075 NC_005810.1 Protein Homology CDS 1151474 1151659 . + 0 ID=cds1081;Parent=gene1113;Dbxref=Genbank:WP_002215393.1;Name=WP_002215393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215393.1;transl_table=11 NC_005810.1 RefSeq gene 1151822 1152073 . - . ID=gene1114;Name=YP_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05595;old_locus_tag=YP1076%2CYP_1076 NC_005810.1 Protein Homology CDS 1151822 1152073 . - 0 ID=cds1082;Parent=gene1114;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NC_005810.1 RefSeq gene 1152784 1153551 . + . ID=gene1115;Name=YP_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05600;old_locus_tag=YP1077%2CYP_1077 NC_005810.1 Protein Homology CDS 1152784 1153551 . + 0 ID=cds1083;Parent=gene1115;Dbxref=Genbank:WP_002215390.1;Name=WP_002215390.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002215390.1;transl_table=11 NC_005810.1 RefSeq gene 1153703 1153828 . - . ID=gene1116;Name=YP_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05605 NC_005810.1 Protein Homology CDS 1153703 1153828 . - 0 ID=cds1084;Parent=gene1116;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11 NC_005810.1 RefSeq gene 1153883 1154170 . + . ID=gene1117;Name=YP_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05610;old_locus_tag=YP1078%2CYP_1078 NC_005810.1 Protein Homology CDS 1153883 1154170 . + 0 ID=cds1085;Parent=gene1117;Dbxref=Genbank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1154226 1154261 . + . ID=id219;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1154587 1155114 . + . ID=gene1118;Name=YP_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05615;old_locus_tag=YP1080%2CYP_1080 NC_005810.1 Protein Homology CDS 1154587 1155114 . + 0 ID=cds1086;Parent=gene1118;Dbxref=Genbank:WP_002215386.1;Name=WP_002215386.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002215386.1;transl_table=11 NC_005810.1 RefSeq gene 1155482 1155928 . + . ID=gene1119;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YP_RS05620;old_locus_tag=YP1081%2CYP_1081 NC_005810.1 Protein Homology CDS 1155482 1155928 . + 0 ID=cds1087;Parent=gene1119;Dbxref=Genbank:WP_011171792.1;Name=WP_011171792.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=WP_011171792.1;transl_table=11 NC_005810.1 RefSeq gene 1156369 1159033 . - . ID=gene1120;Name=YP_RS05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS05625;old_locus_tag=YP1082;pseudo=true NC_005810.1 Protein Homology CDS 1156369 1159033 . - 0 ID=cds1088;Parent=gene1120;exception=annotated by transcript or proteomic data;gbkey=CDS;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1159361 1160782 . - . ID=gene1121;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YP_RS05630;old_locus_tag=YP1083%2CYP_1083 NC_005810.1 Protein Homology CDS 1159361 1160782 . - 0 ID=cds1089;Parent=gene1121;Dbxref=Genbank:WP_002231078.1;Name=WP_002231078.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=porin;protein_id=WP_002231078.1;transl_table=11 NC_005810.1 RefSeq gene 1161488 1163155 . - . ID=gene1122;Name=YP_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05635;old_locus_tag=YP1084%2CYP_1084 NC_005810.1 Protein Homology CDS 1161488 1163155 . - 0 ID=cds1090;Parent=gene1122;Dbxref=Genbank:WP_002210354.1;Name=WP_002210354.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NC_005810.1 RefSeq gene 1163370 1165403 . - . ID=gene1123;Name=YP_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05640;old_locus_tag=YP1085%2CYP_1085 NC_005810.1 Protein Homology CDS 1163370 1165403 . - 0 ID=cds1091;Parent=gene1123;Dbxref=Genbank:WP_002210353.1;Name=WP_002210353.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetylglucosamine transporter subunit IIABC;protein_id=WP_002210353.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1165749 1165792 . + . ID=id220;Note=degenerate repeat region containing 2 copies of a 22bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1165803 1166603 . + . ID=gene1124;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YP_RS05645;old_locus_tag=YP1086%2CYP_1086 NC_005810.1 Protein Homology CDS 1165803 1166603 . + 0 ID=cds1092;Parent=gene1124;Dbxref=Genbank:WP_011171793.1;Name=WP_011171793.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_011171793.1;transl_table=11 NC_005810.1 RefSeq gene 1166623 1167768 . + . ID=gene1125;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YP_RS05650;old_locus_tag=YP1087%2CYP_1087 NC_005810.1 Protein Homology CDS 1166623 1167768 . + 0 ID=cds1093;Parent=gene1125;Dbxref=Genbank:WP_002210351.1;Name=WP_002210351.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11 NC_005810.1 RefSeq gene 1167785 1169011 . + . ID=gene1126;Name=YP_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05655;old_locus_tag=YP1088%2CYP_1088 NC_005810.1 Protein Homology CDS 1167785 1169011 . + 0 ID=cds1094;Parent=gene1126;Dbxref=Genbank:WP_002227874.1;Name=WP_002227874.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227874.1;transl_table=11 NC_005810.1 RefSeq gene 1169084 1169836 . + . ID=gene1127;Name=YP_RS05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS05660;old_locus_tag=YP1089;pseudo=true NC_005810.1 Protein Homology CDS 1169084 1169836 . + 0 ID=cds1095;Parent=gene1127;gbkey=CDS;product=UMP phosphatase;pseudo=true;transl_except=(pos:1169366..1169368%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 1170191 1171855 . + . ID=gene1128;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YP_RS05665;old_locus_tag=YP1090%2CYP_1090 NC_005810.1 Protein Homology CDS 1170191 1171855 . + 0 ID=cds1096;Parent=gene1128;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11 NC_005810.1 RefSeq gene 1171904 1172041 . - . ID=gene1129;Name=YP_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05670;old_locus_tag=YP1091%2CYP_1091 NC_005810.1 Protein Homology CDS 1171904 1172041 . - 0 ID=cds1097;Parent=gene1129;Dbxref=Genbank:WP_011171795.1;Name=WP_011171795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171795.1;transl_table=11 NC_005810.1 RefSeq gene 1172313 1172389 . + . ID=gene1130;Name=YP_RS05675;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05675;old_locus_tag=tRNA-Met_2%2CYP_t22 NC_005810.1 tRNAscan-SE tRNA 1172313 1172389 . + . ID=rna29;Parent=gene1130;anticodon=(pos:1172347..1172349);gbkey=tRNA;product=tRNA-Met NC_005810.1 tRNAscan-SE exon 1172313 1172389 . + . ID=id221;Parent=rna29;anticodon=(pos:1172347..1172349);gbkey=tRNA;product=tRNA-Met NC_005810.1 RefSeq gene 1172397 1172481 . + . ID=gene1131;Name=YP_RS05680;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05680;old_locus_tag=tRNA-Leu_3%2CYP_t23 NC_005810.1 tRNAscan-SE tRNA 1172397 1172481 . + . ID=rna30;Parent=gene1131;anticodon=(pos:1172431..1172433);gbkey=tRNA;product=tRNA-Leu NC_005810.1 tRNAscan-SE exon 1172397 1172481 . + . ID=id222;Parent=rna30;anticodon=(pos:1172431..1172433);gbkey=tRNA;product=tRNA-Leu NC_005810.1 RefSeq gene 1172511 1172585 . + . ID=gene1132;Name=YP_RS05685;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05685;old_locus_tag=tRNA-Gln_1%2CYP_t24 NC_005810.1 tRNAscan-SE tRNA 1172511 1172585 . + . ID=rna31;Parent=gene1132;anticodon=(pos:1172543..1172545);gbkey=tRNA;product=tRNA-Gln NC_005810.1 tRNAscan-SE exon 1172511 1172585 . + . ID=id223;Parent=rna31;anticodon=(pos:1172543..1172545);gbkey=tRNA;product=tRNA-Gln NC_005810.1 RefSeq gene 1172669 1172743 . + . ID=gene1133;Name=YP_RS05690;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05690;old_locus_tag=tRNA-Gln_2%2CYP_t25 NC_005810.1 tRNAscan-SE tRNA 1172669 1172743 . + . ID=rna32;Parent=gene1133;anticodon=(pos:1172701..1172703);gbkey=tRNA;product=tRNA-Gln NC_005810.1 tRNAscan-SE exon 1172669 1172743 . + . ID=id224;Parent=rna32;anticodon=(pos:1172701..1172703);gbkey=tRNA;product=tRNA-Gln NC_005810.1 RefSeq gene 1172776 1172852 . + . ID=gene1134;Name=YP_RS05695;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05695;old_locus_tag=tRNA-Met_3%2CYP_t26 NC_005810.1 tRNAscan-SE tRNA 1172776 1172852 . + . ID=rna33;Parent=gene1134;anticodon=(pos:1172810..1172812);gbkey=tRNA;product=tRNA-Met NC_005810.1 tRNAscan-SE exon 1172776 1172852 . + . ID=id225;Parent=rna33;anticodon=(pos:1172810..1172812);gbkey=tRNA;product=tRNA-Met NC_005810.1 RefSeq gene 1172858 1172932 . + . ID=gene1135;Name=YP_RS05700;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS05700;old_locus_tag=tRNA-Gln_3%2CYP_t27 NC_005810.1 tRNAscan-SE tRNA 1172858 1172932 . + . ID=rna34;Parent=gene1135;anticodon=(pos:1172890..1172892);gbkey=tRNA;product=tRNA-Gln NC_005810.1 tRNAscan-SE exon 1172858 1172932 . + . ID=id226;Parent=rna34;anticodon=(pos:1172890..1172892);gbkey=tRNA;product=tRNA-Gln NC_005810.1 RefSeq repeat_region 1172976 1173007 . + . ID=id227;Note=exact repeat region containing 2 copies of a 16 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1173326 1174507 . - . ID=gene1136;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=YP_RS05705;old_locus_tag=YP1092%2CYP_1092 NC_005810.1 Protein Homology CDS 1173326 1174507 . - 0 ID=cds1098;Parent=gene1136;Dbxref=Genbank:WP_002210347.1;Name=WP_002210347.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_002210347.1;transl_table=11 NC_005810.1 RefSeq gene 1174749 1176173 . + . ID=gene1137;Name=YP_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05710;old_locus_tag=YP1093%2CYP_1093 NC_005810.1 Protein Homology CDS 1174749 1176173 . + 0 ID=cds1099;Parent=gene1137;Dbxref=Genbank:WP_002231077.1;Name=WP_002231077.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_002231077.1;transl_table=11 NC_005810.1 RefSeq gene 1176518 1177573 . + . ID=gene1138;Name=YP_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05715;old_locus_tag=YP1094%2CYP_1094 NC_005810.1 Protein Homology CDS 1176518 1177573 . + 0 ID=cds1100;Parent=gene1138;Dbxref=Genbank:WP_002354474.1;Name=WP_002354474.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_002354474.1;transl_table=11 NC_005810.1 RefSeq gene 1177570 1178043 . + . ID=gene1139;Name=YP_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05720;old_locus_tag=YP1095%2CYP_1095 NC_005810.1 Protein Homology CDS 1177570 1178043 . + 0 ID=cds1101;Parent=gene1139;Dbxref=Genbank:WP_002210344.1;Name=WP_002210344.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_002210344.1;transl_table=11 NC_005810.1 RefSeq gene 1178161 1179039 . + . ID=gene1140;Name=YP_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05725;old_locus_tag=YP1096%2CYP_1096 NC_005810.1 Protein Homology CDS 1178161 1179039 . + 0 ID=cds1102;Parent=gene1140;Dbxref=Genbank:WP_002210342.1;Name=WP_002210342.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_002210342.1;transl_table=11 NC_005810.1 RefSeq gene 1179047 1180594 . + . ID=gene1141;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YP_RS05730;old_locus_tag=YP1097%2CYP_1097 NC_005810.1 Protein Homology CDS 1179047 1180594 . + 0 ID=cds1103;Parent=gene1141;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NC_005810.1 RefSeq gene 1181359 1182276 . + . ID=gene1142;Name=YP_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05735;old_locus_tag=YP1098%2CYP_1098 NC_005810.1 Protein Homology CDS 1181359 1182276 . + 0 ID=cds1104;Parent=gene1142;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11 NC_005810.1 RefSeq gene 1182450 1183190 . + . ID=gene1143;Name=YP_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05740;old_locus_tag=YP1099%2CYP_1099 NC_005810.1 Protein Homology CDS 1182450 1183190 . + 0 ID=cds1105;Parent=gene1143;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11 NC_005810.1 RefSeq gene 1183190 1183864 . + . ID=gene1144;Name=YP_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05745;old_locus_tag=YP1100%2CYP_1100 NC_005810.1 Protein Homology CDS 1183190 1183864 . + 0 ID=cds1106;Parent=gene1144;Dbxref=Genbank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;product=glutamate/aspartate transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NC_005810.1 RefSeq gene 1183864 1184589 . + . ID=gene1145;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YP_RS05750;old_locus_tag=YP1101%2CYP_1101 NC_005810.1 Protein Homology CDS 1183864 1184589 . + 0 ID=cds1107;Parent=gene1145;Dbxref=Genbank:WP_002231075.1;Name=WP_002231075.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002231075.1;transl_table=11 NC_005810.1 RefSeq gene 1184723 1185205 . - . ID=gene1146;Name=YP_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05755;old_locus_tag=YP1102%2CYP_1102 NC_005810.1 Protein Homology CDS 1184723 1185205 . - 0 ID=cds1108;Parent=gene1146;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11 NC_005810.1 RefSeq gene 1185466 1188048 . + . ID=gene1147;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YP_RS05760;old_locus_tag=YP1103%2CYP_1103 NC_005810.1 Protein Homology CDS 1185466 1188048 . + 0 ID=cds1109;Parent=gene1147;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NC_005810.1 RefSeq gene 1188063 1188686 . + . ID=gene1148;Name=YP_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05765;old_locus_tag=YP1104%2CYP_1104 NC_005810.1 Protein Homology CDS 1188063 1188686 . + 0 ID=cds1110;Parent=gene1148;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11 NC_005810.1 RefSeq gene 1188683 1189717 . + . ID=gene1149;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YP_RS05770;old_locus_tag=YP1105%2CYP_1105 NC_005810.1 Protein Homology CDS 1188683 1189717 . + 0 ID=cds1111;Parent=gene1149;Dbxref=Genbank:WP_002210331.1;Name=WP_002210331.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_002210331.1;transl_table=11 NC_005810.1 RefSeq gene 1189707 1190369 . + . ID=gene1150;Name=YP_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05775;old_locus_tag=YP1106%2CYP_1106 NC_005810.1 Protein Homology CDS 1189707 1190369 . + 0 ID=cds1112;Parent=gene1150;Dbxref=Genbank:WP_002210330.1;Name=WP_002210330.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NC_005810.1 RefSeq gene 1190593 1190910 . + . ID=gene1151;Name=YP_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05780;old_locus_tag=YP1107%2CYP_1107 NC_005810.1 Protein Homology CDS 1190593 1190910 . + 0 ID=cds1113;Parent=gene1151;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11 NC_005810.1 RefSeq gene 1190914 1191384 . + . ID=gene1152;Name=YP_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05785;old_locus_tag=YP1108%2CYP_1108 NC_005810.1 Protein Homology CDS 1190914 1191384 . + 0 ID=cds1114;Parent=gene1152;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11 NC_005810.1 RefSeq gene 1191466 1193361 . + . ID=gene1153;Name=YP_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05790;old_locus_tag=YP1109%2CYP_1109 NC_005810.1 Protein Homology CDS 1191466 1193361 . + 0 ID=cds1115;Parent=gene1153;Dbxref=Genbank:WP_002210326.1;Name=WP_002210326.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_002210326.1;transl_table=11 NC_005810.1 RefSeq gene 1193532 1194644 . + . ID=gene1154;Name=YP_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05795;old_locus_tag=YP1110%2CYP_1110 NC_005810.1 Protein Homology CDS 1193532 1194644 . + 0 ID=cds1116;Parent=gene1154;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11 NC_005810.1 RefSeq gene 1194654 1195736 . + . ID=gene1155;Name=YP_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05800;old_locus_tag=YP1111%2CYP_1111 NC_005810.1 Protein Homology CDS 1194654 1195736 . + 0 ID=cds1117;Parent=gene1155;Dbxref=Genbank:WP_002210324.1;Name=WP_002210324.1;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210324.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1195922 1195951 . + . ID=id228;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1196139 1197341 . + . ID=gene1156;Name=YP_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05805;old_locus_tag=YP1112%2CYP_1112 NC_005810.1 Protein Homology CDS 1196139 1197341 . + 0 ID=cds1118;Parent=gene1156;Dbxref=Genbank:WP_002210323.1;Name=WP_002210323.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002210323.1;transl_table=11 NC_005810.1 RefSeq gene 1197539 1197802 . + . ID=gene1157;Name=YP_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05810;old_locus_tag=YP1113%2CYP_1113 NC_005810.1 Protein Homology CDS 1197539 1197802 . + 0 ID=cds1119;Parent=gene1157;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11 NC_005810.1 RefSeq gene 1198014 1198715 . + . ID=gene1158;Name=YP_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05815;old_locus_tag=YP1114%2CYP_1114 NC_005810.1 Protein Homology CDS 1198014 1198715 . + 0 ID=cds1120;Parent=gene1158;Dbxref=Genbank:WP_002218201.1;Name=WP_002218201.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_002218201.1;transl_table=11 NC_005810.1 RefSeq gene 1198908 1199873 . + . ID=gene1159;Name=YP_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05820;old_locus_tag=YP1115%2CYP_1115 NC_005810.1 Protein Homology CDS 1198908 1199873 . + 0 ID=cds1121;Parent=gene1159;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NC_005810.1 RefSeq gene 1200054 1200311 . - . ID=gene1160;Name=YP_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05825;old_locus_tag=YP1117%2CYP_1117 NC_005810.1 Protein Homology CDS 1200054 1200311 . - 0 ID=cds1122;Parent=gene1160;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11 NC_005810.1 RefSeq gene 1200366 1200518 . - . ID=gene1161;Name=YP_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05830 NC_005810.1 Protein Homology CDS 1200366 1200518 . - 0 ID=cds1123;Parent=gene1161;Dbxref=Genbank:WP_002210318.1;Name=WP_002210318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210318.1;transl_table=11 NC_005810.1 RefSeq gene 1200878 1201261 . + . ID=gene1162;Name=YP_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05835;old_locus_tag=YP1118%2CYP_1118 NC_005810.1 Protein Homology CDS 1200878 1201261 . + 0 ID=cds1124;Parent=gene1162;Dbxref=Genbank:WP_002210317.1;Name=WP_002210317.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_002210317.1;transl_table=11 NC_005810.1 cmsearch region 1201638 1202066 . - . ID=id229;Note=cspA;gbkey=misc_feature NC_005810.1 RefSeq gene 1201684 1201893 . - . ID=gene1163;Name=YP_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05840;old_locus_tag=YP1120%2CYP_1120 NC_005810.1 Protein Homology CDS 1201684 1201893 . - 0 ID=cds1125;Parent=gene1163;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11 NC_005810.1 RefSeq gene 1202172 1202651 . + . ID=gene1164;Name=YP_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05845;old_locus_tag=YP1121%2CYP_1121 NC_005810.1 Protein Homology CDS 1202172 1202651 . + 0 ID=cds1126;Parent=gene1164;Dbxref=Genbank:WP_012229509.1;Name=WP_012229509.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012229509.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1202740 1202769 . + . ID=id230;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1202824 1202857 . + . ID=id231;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1202971 1203561 . - . ID=gene1165;Name=YP_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05850;old_locus_tag=YP1122%2CYP_1122 NC_005810.1 Protein Homology CDS 1202971 1203561 . - 0 ID=cds1127;Parent=gene1165;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NC_005810.1 RefSeq gene 1204011 1204976 . + . ID=gene1166;Name=YP_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05855;old_locus_tag=YP1123%2CYP_1123 NC_005810.1 Protein Homology CDS 1204011 1204976 . + 0 ID=cds1128;Parent=gene1166;Dbxref=Genbank:WP_002210312.1;Name=WP_002210312.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210312.1;transl_table=11 NC_005810.1 RefSeq gene 1205158 1205340 . + . ID=gene1167;Name=YP_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05860;old_locus_tag=YP1124%2CYP_1124 NC_005810.1 Protein Homology CDS 1205158 1205340 . + 0 ID=cds1129;Parent=gene1167;Dbxref=Genbank:WP_002210311.1;Name=WP_002210311.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210311.1;transl_table=11 NC_005810.1 RefSeq gene 1205358 1205552 . - . ID=gene1168;Name=YP_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05865;old_locus_tag=YP1125%2CYP_1125 NC_005810.1 Protein Homology CDS 1205358 1205552 . - 0 ID=cds1130;Parent=gene1168;Dbxref=Genbank:WP_002210310.1;Name=WP_002210310.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_002210310.1;transl_table=11 NC_005810.1 RefSeq gene 1205995 1206282 . + . ID=gene1169;Name=YP_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05870;old_locus_tag=YP1126%2CYP_1126 NC_005810.1 Protein Homology CDS 1205995 1206282 . + 0 ID=cds1131;Parent=gene1169;Dbxref=Genbank:WP_002210309.1;Name=WP_002210309.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002210309.1;transl_table=11 NC_005810.1 RefSeq gene 1206298 1208088 . - . ID=gene1170;Name=YP_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05875;old_locus_tag=YP1127%2CYP_1127 NC_005810.1 Protein Homology CDS 1206298 1208088 . - 0 ID=cds1132;Parent=gene1170;Dbxref=Genbank:WP_002214723.1;Name=WP_002214723.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002214723.1;transl_table=11 NC_005810.1 RefSeq gene 1208296 1208499 . - . ID=gene1171;Name=YP_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05880 NC_005810.1 Protein Homology CDS 1208296 1208499 . - 0 ID=cds1133;Parent=gene1171;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11 NC_005810.1 RefSeq gene 1208658 1209473 . - . ID=gene1172;Name=YP_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05885;old_locus_tag=YP1128%2CYP_1128 NC_005810.1 Protein Homology CDS 1208658 1209473 . - 0 ID=cds1134;Parent=gene1172;Dbxref=Genbank:WP_002210306.1;Name=WP_002210306.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_002210306.1;transl_table=11 NC_005810.1 RefSeq gene 1209483 1210403 . - . ID=gene1173;Name=YP_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05890;old_locus_tag=YP1129%2CYP_1129 NC_005810.1 Protein Homology CDS 1209483 1210403 . - 0 ID=cds1135;Parent=gene1173;Dbxref=Genbank:WP_002227877.1;Name=WP_002227877.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_002227877.1;transl_table=11 NC_005810.1 RefSeq gene 1210556 1212433 . - . ID=gene1174;Name=YP_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05895;old_locus_tag=YP1130%2CYP_1130 NC_005810.1 Protein Homology CDS 1210556 1212433 . - 0 ID=cds1136;Parent=gene1174;Dbxref=Genbank:WP_002222597.1;Name=WP_002222597.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_002222597.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1212448 1212483 . + . ID=id232;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1212558 1213691 . - . ID=gene1175;Name=YP_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05900;old_locus_tag=YP1131%2CYP_1131 NC_005810.1 Protein Homology CDS 1212558 1213691 . - 0 ID=cds1137;Parent=gene1175;Dbxref=Genbank:WP_002210303.1;Name=WP_002210303.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_002210303.1;transl_table=11 NC_005810.1 RefSeq gene 1213715 1214743 . - . ID=gene1176;Name=YP_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05905;old_locus_tag=YP1132%2CYP_1132 NC_005810.1 Protein Homology CDS 1213715 1214743 . - 0 ID=cds1138;Parent=gene1176;Dbxref=Genbank:WP_002210302.1;Name=WP_002210302.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NC_005810.1 RefSeq gene 1214755 1216302 . - . ID=gene1177;Name=YP_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05910;old_locus_tag=YP1133%2CYP_1133 NC_005810.1 Protein Homology CDS 1214755 1216302 . - 0 ID=cds1139;Parent=gene1177;Dbxref=Genbank:WP_002223323.1;Name=WP_002223323.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_002223323.1;transl_table=11 NC_005810.1 RefSeq gene 1216351 1217280 . - . ID=gene1178;Name=YP_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05915;old_locus_tag=YP1134%2CYP_1134 NC_005810.1 Protein Homology CDS 1216351 1217280 . - 0 ID=cds1140;Parent=gene1178;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1217340 1217393 . + . ID=id233;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1217406 1218391 . - . ID=gene1179;Name=YP_RS05920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS05920;old_locus_tag=YP1135;pseudo=true NC_005810.1 Protein Homology CDS 1217406 1218391 . - 0 ID=cds1141;Parent=gene1179;exception=annotated by transcript or proteomic data;gbkey=CDS;product=inositol 2-dehydrogenase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1218685 1220610 . - . ID=gene1180;Name=YP_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05925;old_locus_tag=YP1136%2CYP_1136 NC_005810.1 Protein Homology CDS 1218685 1220610 . - 0 ID=cds1142;Parent=gene1180;Dbxref=Genbank:WP_002359655.1;Name=WP_002359655.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_002359655.1;transl_table=11 NC_005810.1 RefSeq gene 1220645 1222171 . - . ID=gene1181;Name=YP_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05930;old_locus_tag=YP1137%2CYP_1137 NC_005810.1 Protein Homology CDS 1220645 1222171 . - 0 ID=cds1143;Parent=gene1181;Dbxref=Genbank:WP_002210297.1;Name=WP_002210297.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002210297.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1222312 1222375 . + . ID=id234;Note=degenerate repeat region containing 4 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1222498 1223352 . + . ID=gene1182;Name=YP_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05935;old_locus_tag=YP1138%2CYP_1138 NC_005810.1 Protein Homology CDS 1222498 1223352 . + 0 ID=cds1144;Parent=gene1182;Dbxref=Genbank:WP_002210296.1;Name=WP_002210296.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_002210296.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1223356 1223625 . + . ID=id235;gbkey=repeat_region NC_005810.1 RefSeq gene 1223986 1224534 . + . ID=gene1183;Name=YP_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05940;old_locus_tag=YP1140%2CYP_1140 NC_005810.1 Protein Homology CDS 1223986 1224534 . + 0 ID=cds1145;Parent=gene1183;Dbxref=Genbank:WP_002223316.1;Name=WP_002223316.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223316.1;transl_table=11 NC_005810.1 RefSeq gene 1224941 1230919 . + . ID=gene1184;Name=YP_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05945;old_locus_tag=YP1141%2CYP_1141 NC_005810.1 Protein Homology CDS 1224941 1230919 . + 0 ID=cds1146;Parent=gene1184;Dbxref=Genbank:WP_002210294.1;Name=WP_002210294.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210294.1;transl_table=11 NC_005810.1 RefSeq gene 1230976 1233339 . + . ID=gene1185;Name=YP_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05950;old_locus_tag=YP1142%2CYP_1142 NC_005810.1 Protein Homology CDS 1230976 1233339 . + 0 ID=cds1147;Parent=gene1185;Dbxref=Genbank:WP_002223314.1;Name=WP_002223314.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_002223314.1;transl_table=11 NC_005810.1 RefSeq gene 1233552 1233797 . - . ID=gene1186;Name=YP_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05955;old_locus_tag=YP1143%2CYP_1143 NC_005810.1 Protein Homology CDS 1233552 1233797 . - 0 ID=cds1148;Parent=gene1186;Dbxref=Genbank:WP_002209745.1;Name=WP_002209745.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002209745.1;transl_table=11 NC_005810.1 RefSeq gene 1234470 1235051 . + . ID=gene1187;Name=YP_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05960;old_locus_tag=YP1145%2CYP_1145 NC_005810.1 Protein Homology CDS 1234470 1235051 . + 0 ID=cds1149;Parent=gene1187;Dbxref=Genbank:WP_002216002.1;Name=WP_002216002.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216002.1;transl_table=11 NC_005810.1 RefSeq gene 1235123 1235326 . + . ID=gene1188;Name=YP_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05965;old_locus_tag=YP1146%2CYP_1146 NC_005810.1 Protein Homology CDS 1235123 1235326 . + 0 ID=cds1150;Parent=gene1188;Dbxref=Genbank:WP_002216003.1;Name=WP_002216003.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216003.1;transl_table=11 NC_005810.1 RefSeq gene 1235319 1235720 . + . ID=gene1189;Name=YP_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05970;old_locus_tag=YP1147%2CYP_1147 NC_005810.1 Protein Homology CDS 1235319 1235720 . + 0 ID=cds1151;Parent=gene1189;Dbxref=Genbank:WP_002209746.1;Name=WP_002209746.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209746.1;transl_table=11 NC_005810.1 RefSeq gene 1235952 1236353 . + . ID=gene1190;Name=YP_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05975;old_locus_tag=YP1149%2CYP_1149 NC_005810.1 Protein Homology CDS 1235952 1236353 . + 0 ID=cds1152;Parent=gene1190;Dbxref=Genbank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209748.1;transl_table=11 NC_005810.1 RefSeq gene 1236365 1236937 . - . ID=gene1191;Name=YP_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05980;old_locus_tag=YP1150%2CYP_1150 NC_005810.1 Protein Homology CDS 1236365 1236937 . - 0 ID=cds1153;Parent=gene1191;Dbxref=Genbank:WP_002209749.1;Name=WP_002209749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209749.1;transl_table=11 NC_005810.1 RefSeq gene 1236961 1237212 . - . ID=gene1192;Name=YP_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05985;old_locus_tag=YP1151%2CYP_1151 NC_005810.1 Protein Homology CDS 1236961 1237212 . - 0 ID=cds1154;Parent=gene1192;Dbxref=Genbank:WP_002227852.1;Name=WP_002227852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227852.1;transl_table=11 NC_005810.1 RefSeq gene 1237251 1237490 . - . ID=gene1193;Name=YP_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05990;old_locus_tag=YP1152%2CYP_1152 NC_005810.1 Protein Homology CDS 1237251 1237490 . - 0 ID=cds1155;Parent=gene1193;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NC_005810.1 RefSeq gene 1238299 1240215 . + . ID=gene1194;Name=YP_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS05995;old_locus_tag=YP1153%2CYP_1153 NC_005810.1 Protein Homology CDS 1238299 1240215 . + 0 ID=cds1156;Parent=gene1194;Dbxref=Genbank:WP_002209752.1;Name=WP_002209752.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209752.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1240239 1240412 . + . ID=id236;gbkey=repeat_region NC_005810.1 RefSeq gene 1240750 1241331 . + . ID=gene1195;Name=YP_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06000;old_locus_tag=YP1154%2CYP_1154 NC_005810.1 Protein Homology CDS 1240750 1241331 . + 0 ID=cds1157;Parent=gene1195;Dbxref=Genbank:WP_002209753.1;Name=WP_002209753.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209753.1;transl_table=11 NC_005810.1 RefSeq gene 1241346 1241654 . - . ID=gene1196;Name=YP_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06005;old_locus_tag=YP1155 NC_005810.1 Protein Homology CDS 1241346 1241654 . - 0 ID=cds1158;Parent=gene1196;Dbxref=Genbank:WP_002209754.1;Name=WP_002209754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209754.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1241695 1243014 . + . ID=id237;gbkey=repeat_region NC_005810.1 RefSeq region 1241698 1243012 . - . ID=id238;gbkey=mobile_element NC_005810.1 RefSeq gene 1241733 1242941 . - . ID=gene1197;Name=YP_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06010;old_locus_tag=YP1156%2CYP_1156 NC_005810.1 Protein Homology CDS 1241733 1242941 . - 0 ID=cds1159;Parent=gene1197;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1243136 1243179 . + . ID=id239;Note=degenerate repeat region containing 2 copies of a 22bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1243253 1243286 . + . ID=id240;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1243393 1245600 . + . ID=gene1198;Name=YP_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06015;old_locus_tag=YP1158%2CYP_1158 NC_005810.1 Protein Homology CDS 1243393 1245600 . + 0 ID=cds1160;Parent=gene1198;Dbxref=Genbank:WP_002209756.1;Name=WP_002209756.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209756.1;transl_table=11 NC_005810.1 RefSeq gene 1245593 1246123 . + . ID=gene1199;Name=YP_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06020;old_locus_tag=YP1159%2CYP_1159 NC_005810.1 Protein Homology CDS 1245593 1246123 . + 0 ID=cds1161;Parent=gene1199;Dbxref=Genbank:WP_002209757.1;Name=WP_002209757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209757.1;transl_table=11 NC_005810.1 RefSeq gene 1246282 1248663 . + . ID=gene1200;Name=YP_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06025;old_locus_tag=YP1160%2CYP_1160 NC_005810.1 Protein Homology CDS 1246282 1248663 . + 0 ID=cds1162;Parent=gene1200;Dbxref=Genbank:WP_002209758.1;Name=WP_002209758.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_002209758.1;transl_table=11 NC_005810.1 RefSeq gene 1248742 1250370 . - . ID=gene1201;Name=YP_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06030;old_locus_tag=YP1161%2CYP_1161 NC_005810.1 Protein Homology CDS 1248742 1250370 . - 0 ID=cds1163;Parent=gene1201;Dbxref=Genbank:WP_002209759.1;Name=WP_002209759.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209759.1;transl_table=11 NC_005810.1 RefSeq gene 1250387 1250530 . - . ID=gene1202;Name=YP_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06035 NC_005810.1 Protein Homology CDS 1250387 1250530 . - 0 ID=cds1164;Parent=gene1202;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NC_005810.1 RefSeq gene 1250527 1250652 . - . ID=gene1203;Name=YP_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06040 NC_005810.1 Protein Homology CDS 1250527 1250652 . - 0 ID=cds1165;Parent=gene1203;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NC_005810.1 RefSeq gene 1250843 1251694 . + . ID=gene1204;Name=YP_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06045;old_locus_tag=YP1162%2CYP_1162 NC_005810.1 Protein Homology CDS 1250843 1251694 . + 0 ID=cds1166;Parent=gene1204;Dbxref=Genbank:WP_002209762.1;Name=WP_002209762.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_002209762.1;transl_table=11 NC_005810.1 RefSeq gene 1251720 1252709 . + . ID=gene1205;Name=YP_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06050;old_locus_tag=YP1163%2CYP_1163 NC_005810.1 Protein Homology CDS 1251720 1252709 . + 0 ID=cds1167;Parent=gene1205;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NC_005810.1 RefSeq gene 1252764 1253657 . - . ID=gene1206;Name=YP_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06055;old_locus_tag=YP1164%2CYP_1164 NC_005810.1 Protein Homology CDS 1252764 1253657 . - 0 ID=cds1168;Parent=gene1206;Dbxref=Genbank:WP_002209764.1;Name=WP_002209764.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1253661 1255627 . + . ID=id241;gbkey=repeat_region NC_005810.1 RefSeq region 1253665 1255617 . + . ID=id242;gbkey=mobile_element NC_005810.1 RefSeq gene 1253751 1254773 . + . ID=gene1207;Name=YP_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06060;old_locus_tag=YP1165%2CYP_1165 NC_005810.1 Protein Homology CDS 1253751 1254773 . + 0 ID=cds1169;Parent=gene1207;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 1254773 1255552 . + . ID=gene1208;Name=YP_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06065;old_locus_tag=YP1166%2CYP_1166 NC_005810.1 Protein Homology CDS 1254773 1255552 . + 0 ID=cds1170;Parent=gene1208;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 1255622 1256596 . + . ID=gene1209;Name=YP_RS06070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS06070;old_locus_tag=YP1167;partial=true;pseudo=true;start_range=.,1255622 NC_005810.1 Protein Homology CDS 1255622 1256596 . + 0 ID=cds1171;Parent=gene1209;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=3-oxoacyl-ACP synthase;pseudo=true;start_range=.,1255622;transl_table=11 NC_005810.1 RefSeq repeat_region 1256601 1257317 . + . ID=id243;gbkey=repeat_region NC_005810.1 RefSeq region 1256605 1257316 . - . ID=id244;gbkey=mobile_element NC_005810.1 RefSeq gene 1256713 1257171 . - . ID=gene1210;Name=YP_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06075;old_locus_tag=YP1168%2CYP_1168 NC_005810.1 Protein Homology CDS 1256713 1257171 . - 0 ID=cds1172;Parent=gene1210;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 1257161 1257316 . - . ID=gene1211;Name=YP_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06080 NC_005810.1 Protein Homology CDS 1257161 1257316 . - 0 ID=cds1173;Parent=gene1211;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_005810.1 RefSeq gene 1257369 1257536 . - . ID=gene1212;Name=YP_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06085;old_locus_tag=YP1169%2CYP_1169 NC_005810.1 Protein Homology CDS 1257369 1257536 . - 0 ID=cds1174;Parent=gene1212;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NC_005810.1 RefSeq gene 1257617 1257757 . - . ID=gene1213;Name=YP_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06090;old_locus_tag=YP1170%2CYP_1170 NC_005810.1 Protein Homology CDS 1257617 1257757 . - 0 ID=cds1175;Parent=gene1213;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11 NC_005810.1 RefSeq gene 1257806 1258384 . - . ID=gene1214;Name=YP_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06095;old_locus_tag=YP1171%2CYP_1171 NC_005810.1 Protein Homology CDS 1257806 1258384 . - 0 ID=cds1176;Parent=gene1214;Dbxref=Genbank:WP_002211289.1;Name=WP_002211289.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211289.1;transl_table=11 NC_005810.1 RefSeq gene 1258381 1260033 . - . ID=gene1215;Name=YP_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06100;old_locus_tag=YP1172%2CYP_1172 NC_005810.1 Protein Homology CDS 1258381 1260033 . - 0 ID=cds1177;Parent=gene1215;Dbxref=Genbank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_002211290.1;transl_table=11 NC_005810.1 RefSeq gene 1260020 1261237 . - . ID=gene1216;Name=YP_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06105;old_locus_tag=YP1173%2CYP_1173 NC_005810.1 Protein Homology CDS 1260020 1261237 . - 0 ID=cds1178;Parent=gene1216;Dbxref=Genbank:WP_002354008.1;Name=WP_002354008.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_002354008.1;transl_table=11 NC_005810.1 RefSeq gene 1261435 1263348 . - . ID=gene1217;Name=YP_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06110;old_locus_tag=YP1174%2CYP_1174 NC_005810.1 Protein Homology CDS 1261435 1263348 . - 0 ID=cds1179;Parent=gene1217;Dbxref=Genbank:WP_002211292.1;Name=WP_002211292.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211292.1;transl_table=11 NC_005810.1 RefSeq gene 1263354 1265474 . - . ID=gene1218;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=YP_RS06115;old_locus_tag=YP1175%2CYP_1175 NC_005810.1 Protein Homology CDS 1263354 1265474 . - 0 ID=cds1180;Parent=gene1218;Dbxref=Genbank:WP_002211293.1;Name=WP_002211293.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_002211293.1;transl_table=11 NC_005810.1 RefSeq gene 1265577 1266686 . + . ID=gene1219;Name=YP_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06120;old_locus_tag=YP1176%2CYP_1176 NC_005810.1 Protein Homology CDS 1265577 1266686 . + 0 ID=cds1181;Parent=gene1219;Dbxref=Genbank:WP_002363919.1;Name=WP_002363919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002363919.1;transl_table=11 NC_005810.1 RefSeq gene 1266712 1267263 . - . ID=gene1220;Name=YP_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06125;old_locus_tag=YP1177%2CYP_1177 NC_005810.1 Protein Homology CDS 1266712 1267263 . - 0 ID=cds1182;Parent=gene1220;Dbxref=Genbank:WP_002211295.1;Name=WP_002211295.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_002211295.1;transl_table=11 NC_005810.1 RefSeq gene 1267446 1268456 . - . ID=gene1221;Name=YP_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06130;old_locus_tag=YP1178%2CYP_1178 NC_005810.1 Protein Homology CDS 1267446 1268456 . - 0 ID=cds1183;Parent=gene1221;Dbxref=Genbank:WP_002211296.1;Name=WP_002211296.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11 NC_005810.1 RefSeq gene 1269065 1271680 . - . ID=gene1222;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YP_RS06135;old_locus_tag=YP1179%2CYP_1179 NC_005810.1 Protein Homology CDS 1269065 1271680 . - 0 ID=cds1184;Parent=gene1222;Dbxref=Genbank:WP_002220013.1;Name=WP_002220013.1;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=WP_002220013.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1272035 1272106 . + . ID=id245;Note=degenerate repeat region containing 4 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1272414 1273619 . + . ID=gene1223;Name=YP_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06140;old_locus_tag=YP1180%2CYP_1180 NC_005810.1 Protein Homology CDS 1272414 1273619 . + 0 ID=cds1185;Parent=gene1223;Dbxref=Genbank:WP_002228013.1;Name=WP_002228013.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1273716 1273745 . + . ID=id246;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1274133 1275533 . + . ID=gene1224;Name=YP_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06145;old_locus_tag=YP1181%2CYP_1181 NC_005810.1 Protein Homology CDS 1274133 1275533 . + 0 ID=cds1186;Parent=gene1224;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 1275637 1275656 . + . ID=id247;Dbxref=CollecTF:EXPSITE_0002b2a0;Note=Transcription factor binding site for NP_991538. Originally reported in Yersinia pestis biovar Microtus str. 201~Evidence of regulation for: YP_1182;gbkey=protein_bind NC_005810.1 RefSeq gene 1275831 1276919 . + . ID=gene1225;Name=YP_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06150;old_locus_tag=YP1182%2CYP_1182 NC_005810.1 Protein Homology CDS 1275831 1276919 . + 0 ID=cds1187;Parent=gene1225;Dbxref=Genbank:WP_002231068.1;Name=WP_002231068.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_002231068.1;transl_table=11 NC_005810.1 RefSeq gene 1277176 1278366 . + . ID=gene1226;Name=YP_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06155;old_locus_tag=YP1183%2CYP_1183 NC_005810.1 Protein Homology CDS 1277176 1278366 . + 0 ID=cds1188;Parent=gene1226;Dbxref=Genbank:WP_002211303.1;Name=WP_002211303.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1278420 1278591 . + . ID=id248;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1278686 1278727 . + . ID=id249;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1278790 1279437 . - . ID=gene1227;Name=YP_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06160;old_locus_tag=YP1184%2CYP_1184 NC_005810.1 Protein Homology CDS 1278790 1279437 . - 0 ID=cds1189;Parent=gene1227;Dbxref=Genbank:WP_002211304.1;Name=WP_002211304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211304.1;transl_table=11 NC_005810.1 RefSeq gene 1279498 1280046 . - . ID=gene1228;Name=YP_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06165;old_locus_tag=YP1185%2CYP_1185 NC_005810.1 Protein Homology CDS 1279498 1280046 . - 0 ID=cds1190;Parent=gene1228;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11 NC_005810.1 RefSeq gene 1280270 1282126 . - . ID=gene1229;Name=YP_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06170;old_locus_tag=YP1186%2CYP_1186 NC_005810.1 Protein Homology CDS 1280270 1282126 . - 0 ID=cds1191;Parent=gene1229;Dbxref=Genbank:WP_002217987.1;Name=WP_002217987.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002217987.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1282298 1283019 . + . ID=id250;gbkey=repeat_region NC_005810.1 RefSeq region 1282302 1283013 . - . ID=id251;gbkey=mobile_element NC_005810.1 RefSeq gene 1282410 1282868 . - . ID=gene1230;Name=YP_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06175;old_locus_tag=YP1187%2CYP_1187 NC_005810.1 Protein Homology CDS 1282410 1282868 . - 0 ID=cds1192;Parent=gene1230;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 1282858 1283040 . - . ID=gene1231;Name=YP_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06180 NC_005810.1 Protein Homology CDS 1282858 1283040 . - 0 ID=cds1193;Parent=gene1231;Dbxref=Genbank:WP_002217988.1;Name=WP_002217988.1;gbkey=CDS;product=invasin;protein_id=WP_002217988.1;transl_table=11 NC_005810.1 RefSeq gene 1283084 1287541 . - . ID=gene1232;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YP_RS06185;old_locus_tag=YP1188%2CYP_1188 NC_005810.1 Protein Homology CDS 1283084 1287541 . - 0 ID=cds1194;Parent=gene1232;Dbxref=Genbank:WP_002211308.1;Name=WP_002211308.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_002211308.1;transl_table=11 NC_005810.1 RefSeq gene 1287538 1288266 . - . ID=gene1233;Name=YP_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06190;old_locus_tag=YP1189%2CYP_1189 NC_005810.1 Protein Homology CDS 1287538 1288266 . - 0 ID=cds1195;Parent=gene1233;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11 NC_005810.1 RefSeq gene 1288247 1289569 . - . ID=gene1234;Name=YP_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06195;old_locus_tag=YP1190%2CYP_1190 NC_005810.1 Protein Homology CDS 1288247 1289569 . - 0 ID=cds1196;Parent=gene1234;Dbxref=Genbank:WP_002211310.1;Name=WP_002211310.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NC_005810.1 RefSeq gene 1289566 1290351 . - . ID=gene1235;Name=YP_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06200;old_locus_tag=YP1191%2CYP_1191 NC_005810.1 Protein Homology CDS 1289566 1290351 . - 0 ID=cds1197;Parent=gene1235;Dbxref=Genbank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_002211311.1;transl_table=11 NC_005810.1 RefSeq gene 1290596 1290748 . + . ID=gene1236;Name=YP_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06205 NC_005810.1 Protein Homology CDS 1290596 1290748 . + 0 ID=cds1198;Parent=gene1236;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1290904 1290939 . + . ID=id252;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1291124 1292017 . - . ID=gene1237;Name=YP_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06210;old_locus_tag=YP1192%2CYP_1192 NC_005810.1 Protein Homology CDS 1291124 1292017 . - 0 ID=cds1199;Parent=gene1237;Dbxref=Genbank:WP_002211313.1;Name=WP_002211313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211313.1;transl_table=11 NC_005810.1 RefSeq gene 1292380 1293132 . - . ID=gene1238;Name=YP_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06215;old_locus_tag=YP1193%2CYP_1193 NC_005810.1 Protein Homology CDS 1292380 1293132 . - 0 ID=cds1200;Parent=gene1238;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NC_005810.1 RefSeq gene 1293129 1293311 . - . ID=gene1239;Name=YP_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06220;old_locus_tag=YP1194 NC_005810.1 Protein Homology CDS 1293129 1293311 . - 0 ID=cds1201;Parent=gene1239;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11 NC_005810.1 RefSeq gene 1293859 1294068 . - . ID=gene1240;Name=YP_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06225;old_locus_tag=YP1195%2CYP_1195 NC_005810.1 Protein Homology CDS 1293859 1294068 . - 0 ID=cds1202;Parent=gene1240;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NC_005810.1 RefSeq gene 1294306 1294503 . + . ID=gene1241;Name=YP_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06230 NC_005810.1 Protein Homology CDS 1294306 1294503 . + 0 ID=cds1203;Parent=gene1241;Dbxref=Genbank:WP_015683832.1;Name=WP_015683832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683832.1;transl_table=11 NC_005810.1 RefSeq gene 1294787 1296205 . + . ID=gene1242;Name=YP_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06235;old_locus_tag=YP1196%2CYP_1196 NC_005810.1 Protein Homology CDS 1294787 1296205 . + 0 ID=cds1204;Parent=gene1242;Dbxref=Genbank:WP_011171803.1;Name=WP_011171803.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171803.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1295909 1295935 . + . ID=id253;gbkey=repeat_region NC_005810.1 RefSeq gene 1296213 1297199 . - . ID=gene1243;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YP_RS06240;old_locus_tag=YP1197%2CYP_1197 NC_005810.1 Protein Homology CDS 1296213 1297199 . - 0 ID=cds1205;Parent=gene1243;Dbxref=Genbank:WP_002211319.1;Name=WP_002211319.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NC_005810.1 RefSeq gene 1297196 1298944 . - . ID=gene1244;Name=YP_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06245;old_locus_tag=YP1198%2CYP_1198 NC_005810.1 Protein Homology CDS 1297196 1298944 . - 0 ID=cds1206;Parent=gene1244;Dbxref=Genbank:WP_002211320.1;Name=WP_002211320.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_002211320.1;transl_table=11 NC_005810.1 RefSeq gene 1298980 1301271 . - . ID=gene1245;Name=YP_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06250;old_locus_tag=YP1199%2CYP_1199 NC_005810.1 Protein Homology CDS 1298980 1301271 . - 0 ID=cds1207;Parent=gene1245;Dbxref=Genbank:WP_011171805.1;Name=WP_011171805.1;gbkey=CDS;product=competence protein ComEC;protein_id=WP_011171805.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1301529 1301584 . + . ID=id254;Note=degenerate repeat region containing 4 copies of a 14bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1301532 1301834 . + . ID=gene1246;Name=YP_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06255 NC_005810.1 Protein Homology CDS 1301532 1301834 . + 0 ID=cds1208;Parent=gene1246;Dbxref=Genbank:WP_002430095.1;Name=WP_002430095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430095.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1301609 1301638 . + . ID=id255;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1301818 1302102 . - . ID=gene1247;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YP_RS06260;old_locus_tag=YP1200%2CYP_1200 NC_005810.1 Protein Homology CDS 1301818 1302102 . - 0 ID=cds1209;Parent=gene1247;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NC_005810.1 RefSeq gene 1302163 1303836 . - . ID=gene1248;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YP_RS06265;old_locus_tag=YP1201%2CYP_1201 NC_005810.1 Protein Homology CDS 1302163 1303836 . - 0 ID=cds1210;Parent=gene1248;Dbxref=Genbank:WP_002211323.1;Name=WP_002211323.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_002211323.1;transl_table=11 NC_005810.1 RefSeq gene 1304010 1304702 . - . ID=gene1249;Name=YP_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06270;old_locus_tag=YP1202%2CYP_1202 NC_005810.1 Protein Homology CDS 1304010 1304702 . - 0 ID=cds1211;Parent=gene1249;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11 NC_005810.1 RefSeq gene 1305015 1306301 . - . ID=gene1250;Name=YP_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06275;old_locus_tag=YP1203%2CYP_1203 NC_005810.1 Protein Homology CDS 1305015 1306301 . - 0 ID=cds1212;Parent=gene1250;Dbxref=Genbank:WP_002211325.1;Name=WP_002211325.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002211325.1;transl_table=11 NC_005810.1 RefSeq gene 1306465 1307550 . - . ID=gene1251;Name=YP_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06280;old_locus_tag=YP1204%2CYP_1204 NC_005810.1 Protein Homology CDS 1306465 1307550 . - 0 ID=cds1213;Parent=gene1251;Dbxref=Genbank:WP_002211326.1;Name=WP_002211326.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_002211326.1;transl_table=11 NC_005810.1 RefSeq gene 1307917 1309764 . - . ID=gene1252;Name=YP_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06285;old_locus_tag=YP1205%2CYP_1205 NC_005810.1 Protein Homology CDS 1307917 1309764 . - 0 ID=cds1214;Parent=gene1252;Dbxref=Genbank:WP_002211327.1;Name=WP_002211327.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211327.1;transl_table=11 NC_005810.1 RefSeq gene 1309785 1310879 . - . ID=gene1253;Name=YP_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06290;old_locus_tag=YP1206%2CYP_1206 NC_005810.1 Protein Homology CDS 1309785 1310879 . - 0 ID=cds1215;Parent=gene1253;Dbxref=Genbank:WP_002211328.1;Name=WP_002211328.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002211328.1;transl_table=11 NC_005810.1 RefSeq gene 1311148 1312185 . - . ID=gene1254;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YP_RS06295;old_locus_tag=YP1207%2CYP_1207 NC_005810.1 Protein Homology CDS 1311148 1312185 . - 0 ID=cds1216;Parent=gene1254;Dbxref=Genbank:WP_002211329.1;Name=WP_002211329.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=WP_002211329.1;transl_table=11 NC_005810.1 RefSeq gene 1312334 1314100 . + . ID=gene1255;Name=YP_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06300;old_locus_tag=YP1208%2CYP_1208 NC_005810.1 Protein Homology CDS 1312334 1314100 . + 0 ID=cds1217;Parent=gene1255;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1314197 1314234 . + . ID=id256;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1314796 1315653 . + . ID=gene1256;Name=YP_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06305;old_locus_tag=YP1209%2CYP_1209 NC_005810.1 Protein Homology CDS 1314796 1315653 . + 0 ID=cds1218;Parent=gene1256;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NC_005810.1 RefSeq gene 1315709 1317991 . + . ID=gene1257;Name=YP_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06310;old_locus_tag=YP1210%2CYP_1210 NC_005810.1 Protein Homology CDS 1315709 1317991 . + 0 ID=cds1219;Parent=gene1257;Dbxref=Genbank:WP_002211332.1;Name=WP_002211332.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=keto-acid formate acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NC_005810.1 RefSeq gene 1318109 1318783 . - . ID=gene1258;Name=YP_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06315;old_locus_tag=YP1211%2CYP_1211 NC_005810.1 Protein Homology CDS 1318109 1318783 . - 0 ID=cds1220;Parent=gene1258;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11 NC_005810.1 RefSeq gene 1319770 1320504 . + . ID=gene1259;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YP_RS06320;old_locus_tag=YP1212%2CYP_1212 NC_005810.1 Protein Homology CDS 1319770 1320504 . + 0 ID=cds1221;Parent=gene1259;Dbxref=Genbank:WP_002211334.1;Name=WP_002211334.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating protein;protein_id=WP_002211334.1;transl_table=11 NC_005810.1 RefSeq gene 1320658 1321806 . - . ID=gene1260;Name=YP_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06325;old_locus_tag=YP1213%2CYP_1213 NC_005810.1 Protein Homology CDS 1320658 1321806 . - 0 ID=cds1222;Parent=gene1260;Dbxref=Genbank:WP_002211335.1;Name=WP_002211335.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211335.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1322018 1322057 . + . ID=id257;gbkey=repeat_region NC_005810.1 RefSeq gene 1322053 1323345 . - . ID=gene1261;Name=YP_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06330;old_locus_tag=YP1214%2CYP_1214 NC_005810.1 Protein Homology CDS 1322053 1323345 . - 0 ID=cds1223;Parent=gene1261;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NC_005810.1 RefSeq gene 1323587 1324930 . - . ID=gene1262;Name=YP_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06335;old_locus_tag=YP1215%2CYP_1215 NC_005810.1 Protein Homology CDS 1323587 1324930 . - 0 ID=cds1224;Parent=gene1262;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11 NC_005810.1 RefSeq gene 1324941 1325549 . - . ID=gene1263;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YP_RS06340;old_locus_tag=YP1216%2CYP_1216 NC_005810.1 Protein Homology CDS 1324941 1325549 . - 0 ID=cds1225;Parent=gene1263;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11 NC_005810.1 RefSeq gene 1325742 1329659 . - . ID=gene1264;Name=YP_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06345;old_locus_tag=YP1217%2CYP_1217 NC_005810.1 Protein Homology CDS 1325742 1329659 . - 0 ID=cds1226;Parent=gene1264;Dbxref=Genbank:WP_002231063.1;Name=WP_002231063.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_002231063.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1328773 1328802 . + . ID=id258;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1328926 1328961 . + . ID=id259;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1329782 1330276 . - . ID=gene1265;Name=YP_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06350;old_locus_tag=YP1218%2CYP_1218 NC_005810.1 Protein Homology CDS 1329782 1330276 . - 0 ID=cds1227;Parent=gene1265;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11 NC_005810.1 RefSeq gene 1331043 1332005 . + . ID=gene1266;Name=YP_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06355;old_locus_tag=YP1219%2CYP_1219 NC_005810.1 Protein Homology CDS 1331043 1332005 . + 0 ID=cds1228;Parent=gene1266;Dbxref=Genbank:WP_002211341.1;Name=WP_002211341.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_002211341.1;transl_table=11 NC_005810.1 RefSeq gene 1332110 1332247 . - . ID=gene1267;Name=YP_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06360 NC_005810.1 Protein Homology CDS 1332110 1332247 . - 0 ID=cds1229;Parent=gene1267;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11 NC_005810.1 RefSeq gene 1332464 1334230 . + . ID=gene1268;Name=YP_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06365;old_locus_tag=YP1220%2CYP_1220 NC_005810.1 Protein Homology CDS 1332464 1334230 . + 0 ID=cds1230;Parent=gene1268;Dbxref=Genbank:WP_002217690.1;Name=WP_002217690.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002217690.1;transl_table=11 NC_005810.1 RefSeq gene 1334233 1335957 . + . ID=gene1269;Name=YP_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06370;old_locus_tag=YP1221%2CYP_1221 NC_005810.1 Protein Homology CDS 1334233 1335957 . + 0 ID=cds1231;Parent=gene1269;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11 NC_005810.1 RefSeq gene 1336176 1336886 . + . ID=gene1270;Name=YP_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06375;old_locus_tag=YP1222%2CYP_1222 NC_005810.1 Protein Homology CDS 1336176 1336886 . + 0 ID=cds1232;Parent=gene1270;Dbxref=Genbank:WP_002211346.1;Name=WP_002211346.1;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NC_005810.1 RefSeq gene 1337052 1337270 . + . ID=gene1271;Name=YP_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06380;old_locus_tag=YP1223%2CYP_1223 NC_005810.1 Protein Homology CDS 1337052 1337270 . + 0 ID=cds1233;Parent=gene1271;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1337410 1337451 . + . ID=id260;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1337532 1338253 . + . ID=id261;gbkey=repeat_region NC_005810.1 RefSeq region 1337534 1338245 . - . ID=id262;gbkey=mobile_element NC_005810.1 RefSeq gene 1337642 1338100 . - . ID=gene1272;Name=YP_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06385;old_locus_tag=YP1224%2CYP_1224 NC_005810.1 Protein Homology CDS 1337642 1338100 . - 0 ID=cds1234;Parent=gene1272;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 1338378 1340654 . - . ID=gene1273;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=YP_RS06390;old_locus_tag=YP1225%2CYP_1225 NC_005810.1 Protein Homology CDS 1338378 1340654 . - 0 ID=cds1235;Parent=gene1273;Dbxref=Genbank:WP_002211348.1;Name=WP_002211348.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_002211348.1;transl_table=11 NC_005810.1 RefSeq gene 1340680 1341000 . - . ID=gene1274;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YP_RS06395;old_locus_tag=YP1226%2CYP_1226 NC_005810.1 Protein Homology CDS 1340680 1341000 . - 0 ID=cds1236;Parent=gene1274;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11 NC_005810.1 RefSeq gene 1341361 1341624 . + . ID=gene1275;Name=YP_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06400;old_locus_tag=YP1228%2CYP_1228 NC_005810.1 Protein Homology CDS 1341361 1341624 . + 0 ID=cds1237;Parent=gene1275;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1341852 1341902 . + . ID=id263;Note=degenerate repeat region containing 3 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1341905 1343854 . - . ID=gene1276;Name=YP_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06405;old_locus_tag=YP1229%2CYP_1229 NC_005810.1 Protein Homology CDS 1341905 1343854 . - 0 ID=cds1238;Parent=gene1276;Dbxref=Genbank:WP_011171806.1;Name=WP_011171806.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_011171806.1;transl_table=11 NC_005810.1 RefSeq gene 1343854 1344966 . - . ID=gene1277;Name=YP_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06410;old_locus_tag=YP1230%2CYP_1230 NC_005810.1 Protein Homology CDS 1343854 1344966 . - 0 ID=cds1239;Parent=gene1277;Dbxref=Genbank:WP_002216705.1;Name=WP_002216705.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11 NC_005810.1 RefSeq gene 1345203 1346150 . + . ID=gene1278;Name=YP_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06415;old_locus_tag=YP1232%2CYP_1232 NC_005810.1 Protein Homology CDS 1345203 1346150 . + 0 ID=cds1240;Parent=gene1278;Dbxref=Genbank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211355.1;transl_table=11 NC_005810.1 RefSeq gene 1346287 1347954 . - . ID=gene1279;Name=YP_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06420;old_locus_tag=YP1233%2CYP_1233 NC_005810.1 Protein Homology CDS 1346287 1347954 . - 0 ID=cds1241;Parent=gene1279;Dbxref=Genbank:WP_011171807.1;Name=WP_011171807.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171807.1;transl_table=11 NC_005810.1 RefSeq gene 1348307 1349203 . + . ID=gene1280;Name=YP_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06425;old_locus_tag=YP1234%2CYP_1234 NC_005810.1 Protein Homology CDS 1348307 1349203 . + 0 ID=cds1242;Parent=gene1280;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11 NC_005810.1 RefSeq gene 1349406 1351058 . + . ID=gene1281;Name=YP_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06430;old_locus_tag=YP1235%2CYP_1235 NC_005810.1 Protein Homology CDS 1349406 1351058 . + 0 ID=cds1243;Parent=gene1281;Dbxref=Genbank:WP_002211359.1;Name=WP_002211359.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_002211359.1;transl_table=11 NC_005810.1 RefSeq gene 1351172 1352194 . + . ID=gene1282;Name=YP_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06435;old_locus_tag=YP1236%2CYP_1236 NC_005810.1 Protein Homology CDS 1351172 1352194 . + 0 ID=cds1244;Parent=gene1282;Dbxref=Genbank:WP_002211360.1;Name=WP_002211360.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211360.1;transl_table=11 NC_005810.1 RefSeq gene 1352338 1354059 . + . ID=gene1283;Name=YP_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06440;old_locus_tag=YP1237%2CYP_1237 NC_005810.1 Protein Homology CDS 1352338 1354059 . + 0 ID=cds1245;Parent=gene1283;Dbxref=Genbank:WP_002211361.1;Name=WP_002211361.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_002211361.1;transl_table=11 NC_005810.1 RefSeq gene 1354408 1355427 . + . ID=gene1284;Name=YP_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06445;old_locus_tag=YP1239%2CYP_1239 NC_005810.1 Protein Homology CDS 1354408 1355427 . + 0 ID=cds1246;Parent=gene1284;Dbxref=Genbank:WP_002211362.1;Name=WP_002211362.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_002211362.1;transl_table=11 NC_005810.1 RefSeq gene 1355424 1356914 . + . ID=gene1285;Name=YP_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06450;old_locus_tag=YP1240%2CYP_1240 NC_005810.1 Protein Homology CDS 1355424 1356914 . + 0 ID=cds1247;Parent=gene1285;Dbxref=Genbank:WP_002211363.1;Name=WP_002211363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211363.1;transl_table=11 NC_005810.1 RefSeq gene 1357014 1358021 . + . ID=gene1286;Name=YP_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06455;old_locus_tag=YP1241%2CYP_1241 NC_005810.1 Protein Homology CDS 1357014 1358021 . + 0 ID=cds1248;Parent=gene1286;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1358032 1358069 . + . ID=id264;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1358118 1358693 . + . ID=gene1287;Name=YP_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06460;old_locus_tag=YP1242%2CYP_1242 NC_005810.1 Protein Homology CDS 1358118 1358693 . + 0 ID=cds1249;Parent=gene1287;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NC_005810.1 RefSeq gene 1358863 1359423 . + . ID=gene1288;Name=YP_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06465;old_locus_tag=YP1243%2CYP_1243 NC_005810.1 Protein Homology CDS 1358863 1359423 . + 0 ID=cds1250;Parent=gene1288;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NC_005810.1 RefSeq gene 1359718 1360446 . + . ID=gene1289;Name=YP_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06470;old_locus_tag=YP1244%2CYP_1244 NC_005810.1 Protein Homology CDS 1359718 1360446 . + 0 ID=cds1251;Parent=gene1289;Dbxref=Genbank:WP_002228008.1;Name=WP_002228008.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002228008.1;transl_table=11 NC_005810.1 RefSeq gene 1360467 1361198 . + . ID=gene1290;Name=YP_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06475;old_locus_tag=YP1245%2CYP_1245 NC_005810.1 Protein Homology CDS 1360467 1361198 . + 0 ID=cds1252;Parent=gene1290;Dbxref=Genbank:WP_002211368.1;Name=WP_002211368.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NC_005810.1 RefSeq gene 1361210 1361926 . + . ID=gene1291;Name=YP_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06480;old_locus_tag=YP1246%2CYP_1246 NC_005810.1 Protein Homology CDS 1361210 1361926 . + 0 ID=cds1253;Parent=gene1291;Dbxref=Genbank:WP_002211369.1;Name=WP_002211369.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_002211369.1;transl_table=11 NC_005810.1 RefSeq gene 1361926 1362594 . + . ID=gene1292;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YP_RS06485;old_locus_tag=YP1247%2CYP_1247 NC_005810.1 Protein Homology CDS 1361926 1362594 . + 0 ID=cds1254;Parent=gene1292;Dbxref=Genbank:WP_002211370.1;Name=WP_002211370.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_002211370.1;transl_table=11 NC_005810.1 RefSeq gene 1362784 1363629 . - . ID=gene1293;Name=YP_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06495;old_locus_tag=YP1248%2CYP_1248 NC_005810.1 Protein Homology CDS 1362784 1363629 . - 0 ID=cds1255;Parent=gene1293;Dbxref=Genbank:WP_002223483.1;Name=WP_002223483.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223483.1;transl_table=11 NC_005810.1 RefSeq gene 1363626 1364996 . - . ID=gene1294;Name=YP_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06500;old_locus_tag=YP1249%2CYP_1249 NC_005810.1 Protein Homology CDS 1363626 1364996 . - 0 ID=cds1256;Parent=gene1294;Dbxref=Genbank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211373.1;transl_table=11 NC_005810.1 RefSeq gene 1364989 1365786 . - . ID=gene1295;Name=YP_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06505;old_locus_tag=YP1250%2CYP_1250 NC_005810.1 Protein Homology CDS 1364989 1365786 . - 0 ID=cds1257;Parent=gene1295;Dbxref=Genbank:WP_002211374.1;Name=WP_002211374.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_002211374.1;transl_table=11 NC_005810.1 RefSeq gene 1365774 1366559 . - . ID=gene1296;Name=YP_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06510;old_locus_tag=YP1251%2CYP_1251 NC_005810.1 Protein Homology CDS 1365774 1366559 . - 0 ID=cds1258;Parent=gene1296;Dbxref=Genbank:WP_002211375.1;Name=WP_002211375.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002211375.1;transl_table=11 NC_005810.1 RefSeq gene 1366556 1367612 . - . ID=gene1297;Name=YP_RS06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS06515;old_locus_tag=YP1252;pseudo=true NC_005810.1 Protein Homology CDS 1366556 1367612 . - 0 ID=cds1259;Parent=gene1297;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron-siderophore ABC transporter permease;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1367612 1368703 . - . ID=gene1298;Name=YP_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06520;old_locus_tag=YP1253%2CYP_1253 NC_005810.1 Protein Homology CDS 1367612 1368703 . - 0 ID=cds1260;Parent=gene1298;Dbxref=Genbank:WP_002211377.1;Name=WP_002211377.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002211377.1;transl_table=11 NC_005810.1 RefSeq gene 1369115 1370041 . - . ID=gene1299;Name=YP_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06525;old_locus_tag=YP1254%2CYP_1254 NC_005810.1 Protein Homology CDS 1369115 1370041 . - 0 ID=cds1261;Parent=gene1299;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11 NC_005810.1 RefSeq gene 1370382 1370612 . - . ID=gene1300;Name=YP_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06530;old_locus_tag=YP1255%2CYP_1255 NC_005810.1 Protein Homology CDS 1370382 1370612 . - 0 ID=cds1262;Parent=gene1300;Dbxref=Genbank:WP_002228004.1;Name=WP_002228004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228004.1;transl_table=11 NC_005810.1 RefSeq gene 1370624 1370740 . - . ID=gene1301;Name=YP_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06535 NC_005810.1 Protein Homology CDS 1370624 1370740 . - 0 ID=cds1263;Parent=gene1301;Dbxref=Genbank:WP_002211379.1;Name=WP_002211379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211379.1;transl_table=11 NC_005810.1 RefSeq gene 1370860 1371591 . + . ID=gene1302;Name=YP_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06540;old_locus_tag=YP1256%2CYP_1256 NC_005810.1 Protein Homology CDS 1370860 1371591 . + 0 ID=cds1264;Parent=gene1302;Dbxref=Genbank:WP_002220045.1;Name=WP_002220045.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11 NC_005810.1 RefSeq gene 1371718 1372848 . - . ID=gene1303;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=YP_RS06545;old_locus_tag=YP1257%2CYP_1257 NC_005810.1 Protein Homology CDS 1371718 1372848 . - 0 ID=cds1265;Parent=gene1303;Dbxref=Genbank:WP_002208756.1;Name=WP_002208756.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_002208756.1;transl_table=11 NC_005810.1 RefSeq gene 1372932 1373396 . - . ID=gene1304;Name=YP_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06550;old_locus_tag=YP1258%2CYP_1258 NC_005810.1 Protein Homology CDS 1372932 1373396 . - 0 ID=cds1266;Parent=gene1304;Dbxref=Genbank:WP_002208757.1;Name=WP_002208757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208757.1;transl_table=11 NC_005810.1 RefSeq gene 1373521 1374408 . - . ID=gene1305;Name=YP_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06555;old_locus_tag=YP1259%2CYP_1259 NC_005810.1 Protein Homology CDS 1373521 1374408 . - 0 ID=cds1267;Parent=gene1305;Dbxref=Genbank:WP_011171808.1;Name=WP_011171808.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_011171808.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1374107 1374190 . + . ID=id265;Note=exact repeat region containing 2 copies of a 42 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1374405 1375370 . - . ID=gene1306;Name=YP_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06560;old_locus_tag=YP1260%2CYP_1260 NC_005810.1 Protein Homology CDS 1374405 1375370 . - 0 ID=cds1268;Parent=gene1306;Dbxref=Genbank:WP_002208759.1;Name=WP_002208759.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208759.1;transl_table=11 NC_005810.1 RefSeq gene 1375395 1376528 . - . ID=gene1307;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YP_RS06565;old_locus_tag=YP1261%2CYP_1261 NC_005810.1 Protein Homology CDS 1375395 1376528 . - 0 ID=cds1269;Parent=gene1307;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11 NC_005810.1 RefSeq gene 1376699 1377808 . - . ID=gene1308;Name=YP_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06570;old_locus_tag=YP1262%2CYP_1262 NC_005810.1 Protein Homology CDS 1376699 1377808 . - 0 ID=cds1270;Parent=gene1308;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11 NC_005810.1 RefSeq gene 1378326 1378811 . - . ID=gene1309;Name=YP_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06575;old_locus_tag=YP1263%2CYP_1263 NC_005810.1 Protein Homology CDS 1378326 1378811 . - 0 ID=cds1271;Parent=gene1309;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11 NC_005810.1 RefSeq gene 1378818 1378937 . - . ID=gene1310;Name=YP_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06580 NC_005810.1 Protein Homology CDS 1378818 1378937 . - 0 ID=cds1272;Parent=gene1310;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11 NC_005810.1 RefSeq gene 1378953 1379267 . - . ID=gene1311;Name=YP_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06585;old_locus_tag=YP1264%2CYP_1264 NC_005810.1 Protein Homology CDS 1378953 1379267 . - 0 ID=cds1273;Parent=gene1311;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11 NC_005810.1 RefSeq gene 1379730 1379993 . + . ID=gene1312;Name=YP_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06590;old_locus_tag=YP1265%2CYP_1265 NC_005810.1 Protein Homology CDS 1379730 1379993 . + 0 ID=cds1274;Parent=gene1312;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NC_005810.1 RefSeq gene 1380403 1382091 . + . ID=gene1313;Name=YP_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06595;old_locus_tag=YP1266%2CYP_1266 NC_005810.1 Protein Homology CDS 1380403 1382091 . + 0 ID=cds1275;Parent=gene1313;Dbxref=Genbank:WP_002208766.1;Name=WP_002208766.1;gbkey=CDS;product=transporter;protein_id=WP_002208766.1;transl_table=11 NC_005810.1 RefSeq gene 1382568 1383239 . + . ID=gene1314;Name=YP_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06600;old_locus_tag=YP1267%2CYP_1267 NC_005810.1 Protein Homology CDS 1382568 1383239 . + 0 ID=cds1276;Parent=gene1314;Dbxref=Genbank:WP_002208767.1;Name=WP_002208767.1;gbkey=CDS;product=phosphoesterase;protein_id=WP_002208767.1;transl_table=11 NC_005810.1 RefSeq gene 1383239 1383844 . + . ID=gene1315;Name=YP_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06605;old_locus_tag=YP1268%2CYP_1268 NC_005810.1 Protein Homology CDS 1383239 1383844 . + 0 ID=cds1277;Parent=gene1315;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11 NC_005810.1 RefSeq gene 1384102 1384773 . + . ID=gene1316;Name=YP_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06610;old_locus_tag=YP1269%2CYP_1269 NC_005810.1 Protein Homology CDS 1384102 1384773 . + 0 ID=cds1278;Parent=gene1316;Dbxref=Genbank:WP_002208769.1;Name=WP_002208769.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1384785 1384826 . + . ID=id266;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1385003 1385767 . + . ID=gene1317;Name=YP_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06615;old_locus_tag=YP1270%2CYP_1270 NC_005810.1 Protein Homology CDS 1385003 1385767 . + 0 ID=cds1279;Parent=gene1317;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11 NC_005810.1 RefSeq gene 1386866 1388167 . + . ID=gene1318;Name=YP_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06620;old_locus_tag=YP1271%2CYP_1271 NC_005810.1 Protein Homology CDS 1386866 1388167 . + 0 ID=cds1280;Parent=gene1318;Dbxref=Genbank:WP_002215443.1;Name=WP_002215443.1;gbkey=CDS;product=serine transporter;protein_id=WP_002215443.1;transl_table=11 NC_005810.1 RefSeq gene 1388164 1388316 . - . ID=gene1319;Name=YP_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06625 NC_005810.1 Protein Homology CDS 1388164 1388316 . - 0 ID=cds1281;Parent=gene1319;Dbxref=Genbank:WP_002215444.1;Name=WP_002215444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215444.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1388487 1388522 . + . ID=id267;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1388591 1389796 . - . ID=gene1320;Name=YP_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06630;old_locus_tag=YP1272%2CYP_1272 NC_005810.1 Protein Homology CDS 1388591 1389796 . - 0 ID=cds1282;Parent=gene1320;Dbxref=Genbank:WP_002208774.1;Name=WP_002208774.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002208774.1;transl_table=11 NC_005810.1 RefSeq gene 1390131 1390802 . - . ID=gene1321;Name=YP_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06635;old_locus_tag=YP1273%2CYP_1273 NC_005810.1 Protein Homology CDS 1390131 1390802 . - 0 ID=cds1283;Parent=gene1321;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NC_005810.1 RefSeq gene 1390799 1391785 . - . ID=gene1322;Name=YP_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06640;old_locus_tag=YP1274%2CYP_1274 NC_005810.1 Protein Homology CDS 1390799 1391785 . - 0 ID=cds1284;Parent=gene1322;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NC_005810.1 RefSeq gene 1391782 1392606 . - . ID=gene1323;Name=YP_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06645;old_locus_tag=YP1275%2CYP_1275 NC_005810.1 Protein Homology CDS 1391782 1392606 . - 0 ID=cds1285;Parent=gene1323;Dbxref=Genbank:WP_002208777.1;Name=WP_002208777.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_002208777.1;transl_table=11 NC_005810.1 RefSeq gene 1392834 1393901 . - . ID=gene1324;Name=YP_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06650;old_locus_tag=YP1276%2CYP_1276 NC_005810.1 Protein Homology CDS 1392834 1393901 . - 0 ID=cds1286;Parent=gene1324;Dbxref=Genbank:WP_002208778.1;Name=WP_002208778.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_002208778.1;transl_table=11 NC_005810.1 RefSeq gene 1394388 1395038 . + . ID=gene1325;Name=YP_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06655;old_locus_tag=YP1277%2CYP_1277 NC_005810.1 Protein Homology CDS 1394388 1395038 . + 0 ID=cds1287;Parent=gene1325;Dbxref=Genbank:WP_002215448.1;Name=WP_002215448.1;gbkey=CDS;product=hydrolase;protein_id=WP_002215448.1;transl_table=11 NC_005810.1 RefSeq gene 1395192 1395812 . + . ID=gene1326;Name=YP_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06660;old_locus_tag=YP1278%2CYP_1278 NC_005810.1 Protein Homology CDS 1395192 1395812 . + 0 ID=cds1288;Parent=gene1326;Dbxref=Genbank:WP_041175913.1;Name=WP_041175913.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_041175913.1;transl_table=11 NC_005810.1 RefSeq gene 1396082 1398079 . - . ID=gene1327;Name=YP_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06665;old_locus_tag=YP1279%2CYP_1279 NC_005810.1 Protein Homology CDS 1396082 1398079 . - 0 ID=cds1289;Parent=gene1327;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NC_005810.1 RefSeq gene 1398339 1399127 . - . ID=gene1328;Name=YP_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06670;old_locus_tag=YP1280%2CYP_1280 NC_005810.1 Protein Homology CDS 1398339 1399127 . - 0 ID=cds1290;Parent=gene1328;Dbxref=Genbank:WP_002208783.1;Name=WP_002208783.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002208783.1;transl_table=11 NC_005810.1 RefSeq gene 1399124 1400206 . - . ID=gene1329;Name=YP_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06675;old_locus_tag=YP1281%2CYP_1281 NC_005810.1 Protein Homology CDS 1399124 1400206 . - 0 ID=cds1291;Parent=gene1329;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1400265 1400296 . + . ID=id268;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1400352 1400411 . + . ID=id269;Note=degenerate repeat region containing 3 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1400401 1401546 . - . ID=gene1330;Name=YP_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06680;old_locus_tag=YP1282%2CYP_1282 NC_005810.1 Protein Homology CDS 1400401 1401546 . - 0 ID=cds1292;Parent=gene1330;Dbxref=Genbank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208785.1;transl_table=11 NC_005810.1 RefSeq gene 1401832 1403343 . - . ID=gene1331;Name=YP_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06685;old_locus_tag=YP1283%2CYP_1283 NC_005810.1 Protein Homology CDS 1401832 1403343 . - 0 ID=cds1293;Parent=gene1331;Dbxref=Genbank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;product=lysine transporter;protein_id=WP_002208786.1;transl_table=11 NC_005810.1 RefSeq gene 1403601 1404473 . - . ID=gene1332;Name=YP_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06690;old_locus_tag=YP1284%2CYP_1284 NC_005810.1 Protein Homology CDS 1403601 1404473 . - 0 ID=cds1294;Parent=gene1332;Dbxref=Genbank:WP_002208788.1;Name=WP_002208788.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208788.1;transl_table=11 NC_005810.1 RefSeq gene 1405131 1406219 . + . ID=gene1333;Name=YP_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06695;old_locus_tag=YP1285%2CYP_1285 NC_005810.1 Protein Homology CDS 1405131 1406219 . + 0 ID=cds1295;Parent=gene1333;Dbxref=Genbank:WP_002208790.1;Name=WP_002208790.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208790.1;transl_table=11 NC_005810.1 RefSeq gene 1406383 1407240 . + . ID=gene1334;Name=YP_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06700;old_locus_tag=YP1286%2CYP_1286 NC_005810.1 Protein Homology CDS 1406383 1407240 . + 0 ID=cds1296;Parent=gene1334;Dbxref=Genbank:WP_002208791.1;Name=WP_002208791.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_002208791.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1407262 1407309 . + . ID=id270;Note=degenerate repeat region containing 3 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1407327 1409798 . - . ID=gene1335;Name=YP_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06705;old_locus_tag=YP1287%2CYP_1287 NC_005810.1 Protein Homology CDS 1407327 1409798 . - 0 ID=cds1297;Parent=gene1335;Dbxref=Genbank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;product=usher protein;protein_id=WP_002208792.1;transl_table=11 NC_005810.1 RefSeq gene 1409882 1410703 . - . ID=gene1336;Name=YP_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06710;old_locus_tag=YP1288%2CYP_1288 NC_005810.1 Protein Homology CDS 1409882 1410703 . - 0 ID=cds1298;Parent=gene1336;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NC_005810.1 RefSeq gene 1410830 1411306 . - . ID=gene1337;Name=YP_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06715;old_locus_tag=YP1289%2CYP_1289 NC_005810.1 Protein Homology CDS 1410830 1411306 . - 0 ID=cds1299;Parent=gene1337;Dbxref=Genbank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_002208794.1;transl_table=11 NC_005810.1 RefSeq gene 1411851 1412339 . - . ID=gene1338;Name=YP_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06720;old_locus_tag=YP1290%2CYP_1290 NC_005810.1 Protein Homology CDS 1411851 1412339 . - 0 ID=cds1300;Parent=gene1338;Dbxref=Genbank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;product=protein PsaF;protein_id=WP_002216523.1;transl_table=11 NC_005810.1 RefSeq gene 1412336 1412980 . - . ID=gene1339;Name=YP_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06725;old_locus_tag=YP1291%2CYP_1291 NC_005810.1 Protein Homology CDS 1412336 1412980 . - 0 ID=cds1301;Parent=gene1339;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11 NC_005810.1 RefSeq gene 1413305 1415005 . - . ID=gene1340;Name=YP_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06730;old_locus_tag=YP1292%2CYP_1292 NC_005810.1 Protein Homology CDS 1413305 1415005 . - 0 ID=cds1302;Parent=gene1340;Dbxref=Genbank:WP_002208797.1;Name=WP_002208797.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_002208797.1;transl_table=11 NC_005810.1 RefSeq gene 1415020 1415958 . - . ID=gene1341;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YP_RS06735;old_locus_tag=YP1293%2CYP_1293 NC_005810.1 Protein Homology CDS 1415020 1415958 . - 0 ID=cds1303;Parent=gene1341;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NC_005810.1 RefSeq gene 1415955 1417088 . - . ID=gene1342;Name=YP_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06740;old_locus_tag=YP1294%2CYP_1294 NC_005810.1 Protein Homology CDS 1415955 1417088 . - 0 ID=cds1304;Parent=gene1342;Dbxref=Genbank:WP_002208799.1;Name=WP_002208799.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002208799.1;transl_table=11 NC_005810.1 RefSeq gene 1417350 1417805 . + . ID=gene1343;Name=YP_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06745;old_locus_tag=YP1295%2CYP_1295 NC_005810.1 Protein Homology CDS 1417350 1417805 . + 0 ID=cds1305;Parent=gene1343;Dbxref=Genbank:WP_002208801.1;Name=WP_002208801.1;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=WP_002208801.1;transl_table=11 NC_005810.1 RefSeq gene 1417918 1418916 . - . ID=gene1344;Name=YP_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06750;old_locus_tag=YP1296%2CYP_1296 NC_005810.1 Protein Homology CDS 1417918 1418916 . - 0 ID=cds1306;Parent=gene1344;Dbxref=Genbank:WP_002208802.1;Name=WP_002208802.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002208802.1;transl_table=11 NC_005810.1 RefSeq gene 1418952 1420466 . - . ID=gene1345;Name=YP_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06755;old_locus_tag=YP1297%2CYP_1297 NC_005810.1 Protein Homology CDS 1418952 1420466 . - 0 ID=cds1307;Parent=gene1345;Dbxref=Genbank:WP_002363696.1;Name=WP_002363696.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002363696.1;transl_table=11 NC_005810.1 RefSeq gene 1420635 1421723 . - . ID=gene1346;Name=YP_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06760;old_locus_tag=YP1298%2CYP_1298 NC_005810.1 Protein Homology CDS 1420635 1421723 . - 0 ID=cds1308;Parent=gene1346;Dbxref=Genbank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1421762 1421809 . + . ID=id271;gbkey=repeat_region NC_005810.1 RefSeq gene 1421863 1422573 . - . ID=gene1347;Name=YP_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06765;old_locus_tag=YP1299%2CYP_1299 NC_005810.1 Protein Homology CDS 1421863 1422573 . - 0 ID=cds1309;Parent=gene1347;Dbxref=Genbank:WP_002208805.1;Name=WP_002208805.1;gbkey=CDS;product=ribose-5-phosphate isomerase A 2;protein_id=WP_002208805.1;transl_table=11 NC_005810.1 RefSeq gene 1422593 1424164 . - . ID=gene1348;Name=YP_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06770;old_locus_tag=YP1300%2CYP_1300 NC_005810.1 Protein Homology CDS 1422593 1424164 . - 0 ID=cds1310;Parent=gene1348;Dbxref=Genbank:WP_002230768.1;Name=WP_002230768.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002230768.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1423145 1423198 . + . ID=id272;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1424168 1425664 . - . ID=gene1349;Name=YP_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06775;old_locus_tag=YP1301%2CYP_1301 NC_005810.1 Protein Homology CDS 1424168 1425664 . - 0 ID=cds1311;Parent=gene1349;Dbxref=Genbank:WP_002208807.1;Name=WP_002208807.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002208807.1;transl_table=11 NC_005810.1 RefSeq gene 1426015 1427157 . + . ID=gene1350;Name=YP_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06780;old_locus_tag=YP1302%2CYP_1302 NC_005810.1 Protein Homology CDS 1426015 1427157 . + 0 ID=cds1312;Parent=gene1350;Dbxref=Genbank:WP_002208808.1;Name=WP_002208808.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_002208808.1;transl_table=11 NC_005810.1 RefSeq gene 1427169 1428119 . + . ID=gene1351;Name=YP_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06785;old_locus_tag=YP1303%2CYP_1303 NC_005810.1 Protein Homology CDS 1427169 1428119 . + 0 ID=cds1313;Parent=gene1351;Dbxref=Genbank:WP_011906343.1;Name=WP_011906343.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_011906343.1;transl_table=11 NC_005810.1 RefSeq gene 1428130 1428945 . + . ID=gene1352;Name=YP_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06790;old_locus_tag=YP1304%2CYP_1304 NC_005810.1 Protein Homology CDS 1428130 1428945 . + 0 ID=cds1314;Parent=gene1352;Dbxref=Genbank:WP_002208810.1;Name=WP_002208810.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002208810.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1428143 1428178 . + . ID=id273;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1429014 1429268 . - . ID=gene1353;Name=YP_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06795 NC_005810.1 Protein Homology CDS 1429014 1429268 . - 0 ID=cds1315;Parent=gene1353;Dbxref=Genbank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208811.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1429416 1429451 . + . ID=id274;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1429625 1430869 . + . ID=gene1354;Name=YP_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06800;old_locus_tag=YP1306%2CYP_1306 NC_005810.1 Protein Homology CDS 1429625 1430869 . + 0 ID=cds1316;Parent=gene1354;Dbxref=Genbank:WP_002208812.1;Name=WP_002208812.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11 NC_005810.1 RefSeq gene 1430973 1431545 . + . ID=gene1355;Name=YP_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06805;old_locus_tag=YP1307%2CYP_1307 NC_005810.1 Protein Homology CDS 1430973 1431545 . + 0 ID=cds1317;Parent=gene1355;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11 NC_005810.1 RefSeq gene 1431685 1432878 . - . ID=gene1356;Name=YP_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06810;old_locus_tag=YP1308%2CYP_1308 NC_005810.1 Protein Homology CDS 1431685 1432878 . - 0 ID=cds1318;Parent=gene1356;Dbxref=Genbank:WP_002208813.1;Name=WP_002208813.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_002208813.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1433252 1433289 . + . ID=id275;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1433444 1434916 . + . ID=gene1357;Name=YP_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06815;old_locus_tag=YP1309%2CYP_1309 NC_005810.1 Protein Homology CDS 1433444 1434916 . + 0 ID=cds1319;Parent=gene1357;Dbxref=Genbank:WP_002224659.1;Name=WP_002224659.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_002224659.1;transl_table=11 NC_005810.1 RefSeq gene 1435045 1435788 . - . ID=gene1358;Name=YP_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06820;old_locus_tag=YP1310%2CYP_1310 NC_005810.1 Protein Homology CDS 1435045 1435788 . - 0 ID=cds1320;Parent=gene1358;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NC_005810.1 RefSeq gene 1436159 1436272 . + . ID=gene1359;Name=YP_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06825 NC_005810.1 Protein Homology CDS 1436159 1436272 . + 0 ID=cds1321;Parent=gene1359;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11 NC_005810.1 RefSeq gene 1436596 1437579 . + . ID=gene1360;Name=YP_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06830;old_locus_tag=YP1312%2CYP_1312 NC_005810.1 Protein Homology CDS 1436596 1437579 . + 0 ID=cds1322;Parent=gene1360;Dbxref=Genbank:WP_002208819.1;Name=WP_002208819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208819.1;transl_table=11 NC_005810.1 RefSeq gene 1437638 1438339 . + . ID=gene1361;Name=YP_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06835;old_locus_tag=YP1313%2CYP_1313 NC_005810.1 Protein Homology CDS 1437638 1438339 . + 0 ID=cds1323;Parent=gene1361;Dbxref=Genbank:WP_002208820.1;Name=WP_002208820.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208820.1;transl_table=11 NC_005810.1 RefSeq gene 1438781 1439365 . + . ID=gene1362;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=YP_RS06840;old_locus_tag=YP1314%2CYP_1314 NC_005810.1 Protein Homology CDS 1438781 1439365 . + 0 ID=cds1324;Parent=gene1362;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11 NC_005810.1 RefSeq gene 1440061 1441533 . + . ID=gene1363;Name=YP_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06845;old_locus_tag=YP1315%2CYP_1315 NC_005810.1 Protein Homology CDS 1440061 1441533 . + 0 ID=cds1325;Parent=gene1363;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11 NC_005810.1 RefSeq gene 1441615 1443423 . + . ID=gene1364;Name=YP_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06850;old_locus_tag=YP1316%2CYP_1316 NC_005810.1 Protein Homology CDS 1441615 1443423 . + 0 ID=cds1326;Parent=gene1364;Dbxref=Genbank:WP_002208825.1;Name=WP_002208825.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002208825.1;transl_table=11 NC_005810.1 RefSeq gene 1443433 1444533 . + . ID=gene1365;Name=YP_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06855;old_locus_tag=YP1317%2CYP_1317 NC_005810.1 Protein Homology CDS 1443433 1444533 . + 0 ID=cds1327;Parent=gene1365;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NC_005810.1 RefSeq gene 1444536 1445561 . + . ID=gene1366;Name=YP_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06860;old_locus_tag=YP1318%2CYP_1318 NC_005810.1 Protein Homology CDS 1444536 1445561 . + 0 ID=cds1328;Parent=gene1366;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NC_005810.1 RefSeq gene 1445563 1447155 . + . ID=gene1367;Name=YP_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06865;old_locus_tag=YP1319%2CYP_1319 NC_005810.1 Protein Homology CDS 1445563 1447155 . + 0 ID=cds1329;Parent=gene1367;Dbxref=Genbank:WP_002208828.1;Name=WP_002208828.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208828.1;transl_table=11 NC_005810.1 RefSeq gene 1447216 1447560 . - . ID=gene1368;Name=YP_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06870;old_locus_tag=YP1320%2CYP_1320 NC_005810.1 Protein Homology CDS 1447216 1447560 . - 0 ID=cds1330;Parent=gene1368;Dbxref=Genbank:WP_002208829.1;Name=WP_002208829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208829.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1448309 1448346 . + . ID=id276;Note=exact repeat region containing 2 copies of a 19 bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1448472 1448519 . + . ID=id277;Note=degenerate repeat region containing 3 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1448545 1449744 . - . ID=gene1369;Name=YP_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06875;old_locus_tag=YP1321%2CYP_1321 NC_005810.1 Protein Homology CDS 1448545 1449744 . - 0 ID=cds1331;Parent=gene1369;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1449823 1449867 . + . ID=id278;Note=exact repeat region containing 3 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1449863 1450570 . - . ID=gene1370;Name=YP_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06880;old_locus_tag=YP1322%2CYP_1322 NC_005810.1 Protein Homology CDS 1449863 1450570 . - 0 ID=cds1332;Parent=gene1370;Dbxref=Genbank:WP_002208832.1;Name=WP_002208832.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=WP_002208832.1;transl_table=11 NC_005810.1 RefSeq gene 1451084 1452841 . + . ID=gene1371;Name=YP_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06885;old_locus_tag=YP1323%2CYP_1323 NC_005810.1 Protein Homology CDS 1451084 1452841 . + 0 ID=cds1333;Parent=gene1371;Dbxref=Genbank:WP_002208833.1;Name=WP_002208833.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208833.1;transl_table=11 NC_005810.1 RefSeq gene 1453003 1453287 . + . ID=gene1372;Name=YP_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06890;old_locus_tag=YP1324%2CYP_1324 NC_005810.1 Protein Homology CDS 1453003 1453287 . + 0 ID=cds1334;Parent=gene1372;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1453315 1454038 . + . ID=id279;gbkey=repeat_region NC_005810.1 RefSeq region 1453318 1454029 . - . ID=id280;gbkey=mobile_element NC_005810.1 RefSeq gene 1453426 1453884 . - . ID=gene1373;Name=YP_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06895;old_locus_tag=YP1325%2CYP_1325 NC_005810.1 Protein Homology CDS 1453426 1453884 . - 0 ID=cds1335;Parent=gene1373;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 1453874 1454029 . - . ID=gene1374;Name=YP_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06900 NC_005810.1 Protein Homology CDS 1453874 1454029 . - 0 ID=cds1336;Parent=gene1374;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_005810.1 RefSeq gene 1454074 1455135 . - . ID=gene1375;Name=YP_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06905;old_locus_tag=YP1326%2CYP_1326 NC_005810.1 Protein Homology CDS 1454074 1455135 . - 0 ID=cds1337;Parent=gene1375;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11 NC_005810.1 RefSeq gene 1455493 1455999 . - . ID=gene1376;Name=YP_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06910;old_locus_tag=YP1327%2CYP_1327 NC_005810.1 Protein Homology CDS 1455493 1455999 . - 0 ID=cds1338;Parent=gene1376;Dbxref=Genbank:WP_002213065.1;Name=WP_002213065.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_002213065.1;transl_table=11 NC_005810.1 RefSeq gene 1456228 1456863 . + . ID=gene1377;Name=YP_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06915;old_locus_tag=YP1328%2CYP_1328 NC_005810.1 Protein Homology CDS 1456228 1456863 . + 0 ID=cds1339;Parent=gene1377;Dbxref=Genbank:WP_002213064.1;Name=WP_002213064.1;gbkey=CDS;product=DNA transformation protein tfoX;protein_id=WP_002213064.1;transl_table=11 NC_005810.1 RefSeq gene 1456965 1459103 . - . ID=gene1378;Name=YP_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06920;old_locus_tag=YP1329%2CYP_1329 NC_005810.1 Protein Homology CDS 1456965 1459103 . - 0 ID=cds1340;Parent=gene1378;Dbxref=Genbank:WP_002213063.1;Name=WP_002213063.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213063.1;transl_table=11 NC_005810.1 RefSeq gene 1459133 1459579 . - . ID=gene1379;Name=YP_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06925;old_locus_tag=YP1330%2CYP_1330 NC_005810.1 Protein Homology CDS 1459133 1459579 . - 0 ID=cds1341;Parent=gene1379;Dbxref=Genbank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213062.1;transl_table=11 NC_005810.1 RefSeq gene 1459773 1461827 . + . ID=gene1380;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YP_RS06930;old_locus_tag=YP1331%2CYP_1331 NC_005810.1 Protein Homology CDS 1459773 1461827 . + 0 ID=cds1342;Parent=gene1380;Dbxref=Genbank:WP_002221095.1;Name=WP_002221095.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_002221095.1;transl_table=11 NC_005810.1 RefSeq gene 1461888 1462352 . - . ID=gene1381;Name=YP_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06935;old_locus_tag=YP1332%2CYP_1332 NC_005810.1 Protein Homology CDS 1461888 1462352 . - 0 ID=cds1343;Parent=gene1381;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NC_005810.1 RefSeq gene 1462531 1463211 . - . ID=gene1382;Name=YP_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06940;old_locus_tag=YP1333%2CYP_1333 NC_005810.1 Protein Homology CDS 1462531 1463211 . - 0 ID=cds1344;Parent=gene1382;Dbxref=Genbank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213058.1;transl_table=11 NC_005810.1 RefSeq gene 1463527 1463943 . + . ID=gene1383;Name=YP_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06945;old_locus_tag=YP1334%2CYP_1334 NC_005810.1 Protein Homology CDS 1463527 1463943 . + 0 ID=cds1345;Parent=gene1383;Dbxref=Genbank:WP_002213056.1;Name=WP_002213056.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213056.1;transl_table=11 NC_005810.1 RefSeq gene 1464052 1464369 . - . ID=gene1384;Name=YP_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06950;old_locus_tag=YP1335%2CYP_1335 NC_005810.1 Protein Homology CDS 1464052 1464369 . - 0 ID=cds1346;Parent=gene1384;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NC_005810.1 RefSeq gene 1464430 1465620 . - . ID=gene1385;Name=YP_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06955;old_locus_tag=YP1336%2CYP_1336 NC_005810.1 Protein Homology CDS 1464430 1465620 . - 0 ID=cds1347;Parent=gene1385;Dbxref=Genbank:WP_002213052.1;Name=WP_002213052.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_002213052.1;transl_table=11 NC_005810.1 RefSeq gene 1465714 1465992 . + . ID=gene1386;Name=YP_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06960;old_locus_tag=YP1337%2CYP_1337 NC_005810.1 Protein Homology CDS 1465714 1465992 . + 0 ID=cds1348;Parent=gene1386;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NC_005810.1 RefSeq gene 1466044 1466373 . - . ID=gene1387;Name=YP_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06965;old_locus_tag=YP1338%2CYP_1338 NC_005810.1 Protein Homology CDS 1466044 1466373 . - 0 ID=cds1349;Parent=gene1387;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NC_005810.1 RefSeq gene 1466614 1466701 . + . ID=gene1388;Name=YP_RS06970;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS06970;old_locus_tag=tRNA-Ser_3%2CYP_t28 NC_005810.1 tRNAscan-SE tRNA 1466614 1466701 . + . ID=rna35;Parent=gene1388;anticodon=(pos:1466648..1466650);gbkey=tRNA;product=tRNA-Ser NC_005810.1 tRNAscan-SE exon 1466614 1466701 . + . ID=id281;Parent=rna35;anticodon=(pos:1466648..1466650);gbkey=tRNA;product=tRNA-Ser NC_005810.1 RefSeq gene 1467121 1467408 . + . ID=gene1389;Name=YP_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06975;old_locus_tag=YP1339%2CYP_1339 NC_005810.1 Protein Homology CDS 1467121 1467408 . + 0 ID=cds1350;Parent=gene1389;Dbxref=Genbank:WP_002228572.1;Name=WP_002228572.1;gbkey=CDS;product=integrase;protein_id=WP_002228572.1;transl_table=11 NC_005810.1 RefSeq gene 1467778 1468134 . + . ID=gene1390;Name=YP_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06980 NC_005810.1 Protein Homology CDS 1467778 1468134 . + 0 ID=cds1351;Parent=gene1390;Dbxref=Genbank:WP_002214713.1;Name=WP_002214713.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002214713.1;transl_table=11 NC_005810.1 RefSeq gene 1468168 1468419 . + . ID=gene1391;Name=YP_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06985 NC_005810.1 Protein Homology CDS 1468168 1468419 . + 0 ID=cds1352;Parent=gene1391;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11 NC_005810.1 RefSeq gene 1468434 1469144 . + . ID=gene1392;Name=YP_RS06990;end_range=1469144,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS06990;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 1468434 1469144 . + 0 ID=cds1353;Parent=gene1392;end_range=1469144,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 1469136 1471098 . + . ID=id282;gbkey=repeat_region NC_005810.1 RefSeq region 1469141 1471093 . + . ID=id283;gbkey=mobile_element NC_005810.1 RefSeq gene 1469227 1470249 . + . ID=gene1393;Name=YP_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS06995;old_locus_tag=YP1341%2CYP_1341 NC_005810.1 Protein Homology CDS 1469227 1470249 . + 0 ID=cds1354;Parent=gene1393;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 1470249 1471028 . + . ID=gene1394;Name=YP_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07000;old_locus_tag=YP1342%2CYP_1342 NC_005810.1 Protein Homology CDS 1470249 1471028 . + 0 ID=cds1355;Parent=gene1394;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 1471021 1471545 . + . ID=gene1395;Name=YP_RS07005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS07005;partial=true;pseudo=true;start_range=.,1471021 NC_005810.1 Protein Homology CDS 1471021 1471545 . + 0 ID=cds1356;Parent=gene1395;gbkey=CDS;partial=true;product=cytotoxic necrotizing factor;pseudo=true;start_range=.,1471021;transl_except=(pos:1471090..1471092%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 1471979 1474396 . - . ID=gene1396;Name=YP_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07010;old_locus_tag=YP1343%2CYP_1343 NC_005810.1 Protein Homology CDS 1471979 1474396 . - 0 ID=cds1357;Parent=gene1396;Dbxref=Genbank:WP_002213039.1;Name=WP_002213039.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213039.1;transl_table=11 NC_005810.1 RefSeq gene 1474550 1475296 . - . ID=gene1397;Name=YP_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07015;old_locus_tag=YP1344%2CYP_1344 NC_005810.1 Protein Homology CDS 1474550 1475296 . - 0 ID=cds1358;Parent=gene1397;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1475521 1475698 . + . ID=id284;Note=degenerate repeat region containing 2 copies of a 89bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1476027 1476245 . + . ID=gene1398;Name=YP_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07020;old_locus_tag=YP1345 NC_005810.1 Protein Homology CDS 1476027 1476245 . + 0 ID=cds1359;Parent=gene1398;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NC_005810.1 RefSeq gene 1476509 1477033 . + . ID=gene1399;Name=YP_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07025;old_locus_tag=YP1346%2CYP_1346 NC_005810.1 Protein Homology CDS 1476509 1477033 . + 0 ID=cds1360;Parent=gene1399;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11 NC_005810.1 RefSeq gene 1477023 1478306 . + . ID=gene1400;Name=YP_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07030;old_locus_tag=YP1347%2CYP_1347 NC_005810.1 Protein Homology CDS 1477023 1478306 . + 0 ID=cds1361;Parent=gene1400;Dbxref=Genbank:WP_002213032.1;Name=WP_002213032.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_002213032.1;transl_table=11 NC_005810.1 RefSeq gene 1478308 1479045 . + . ID=gene1401;Name=YP_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07035;old_locus_tag=YP1348%2CYP_1348 NC_005810.1 Protein Homology CDS 1478308 1479045 . + 0 ID=cds1362;Parent=gene1401;Dbxref=Genbank:WP_002213030.1;Name=WP_002213030.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_002213030.1;transl_table=11 NC_005810.1 RefSeq gene 1479061 1480299 . + . ID=gene1402;Name=YP_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07040;old_locus_tag=YP1349%2CYP_1349 NC_005810.1 Protein Homology CDS 1479061 1480299 . + 0 ID=cds1363;Parent=gene1402;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11 NC_005810.1 RefSeq gene 1480292 1481011 . + . ID=gene1403;Name=YP_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07045;old_locus_tag=YP1350%2CYP_1350 NC_005810.1 Protein Homology CDS 1480292 1481011 . + 0 ID=cds1364;Parent=gene1403;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11 NC_005810.1 RefSeq gene 1481013 1481765 . + . ID=gene1404;Name=YP_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07050;old_locus_tag=YP1351%2CYP_1351 NC_005810.1 Protein Homology CDS 1481013 1481765 . + 0 ID=cds1365;Parent=gene1404;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11 NC_005810.1 RefSeq gene 1481768 1482556 . + . ID=gene1405;Name=YP_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07055;old_locus_tag=YP1352%2CYP_1352 NC_005810.1 Protein Homology CDS 1481768 1482556 . + 0 ID=cds1366;Parent=gene1405;Dbxref=Genbank:WP_002213024.1;Name=WP_002213024.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002213024.1;transl_table=11 NC_005810.1 RefSeq gene 1482751 1483083 . + . ID=gene1406;Name=YP_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07060;old_locus_tag=YP1353 NC_005810.1 Protein Homology CDS 1482751 1483083 . + 0 ID=cds1367;Parent=gene1406;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11 NC_005810.1 RefSeq gene 1483121 1483369 . + . ID=gene1407;Name=YP_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07065;old_locus_tag=YP1354%2CYP_1354 NC_005810.1 Protein Homology CDS 1483121 1483369 . + 0 ID=cds1368;Parent=gene1407;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11 NC_005810.1 RefSeq gene 1483468 1484316 . + . ID=gene1408;Name=YP_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07070;old_locus_tag=YP1355%2CYP_1355 NC_005810.1 Protein Homology CDS 1483468 1484316 . + 0 ID=cds1369;Parent=gene1408;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11 NC_005810.1 RefSeq gene 1484473 1484640 . + . ID=gene1409;Name=YP_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07075 NC_005810.1 Protein Homology CDS 1484473 1484640 . + 0 ID=cds1370;Parent=gene1409;Dbxref=Genbank:WP_002214708.1;Name=WP_002214708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214708.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1484878 1491746 . + . ID=id285;gbkey=repeat_region NC_005810.1 RefSeq gene 1485305 1485805 . + . ID=gene1410;Name=YP_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07080;old_locus_tag=YP1356%2CYP_1356 NC_005810.1 Protein Homology CDS 1485305 1485805 . + 0 ID=cds1371;Parent=gene1410;Dbxref=Genbank:WP_002213014.1;Name=WP_002213014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213014.1;transl_table=11 NC_005810.1 RefSeq gene 1485848 1487392 . + . ID=gene1411;Name=YP_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07085;old_locus_tag=YP1357%2CYP_1357 NC_005810.1 Protein Homology CDS 1485848 1487392 . + 0 ID=cds1372;Parent=gene1411;Dbxref=Genbank:WP_002215896.1;Name=WP_002215896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215896.1;transl_table=11 NC_005810.1 RefSeq gene 1487404 1488756 . + . ID=gene1412;Name=YP_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07090;old_locus_tag=YP1358%2CYP_1358 NC_005810.1 Protein Homology CDS 1487404 1488756 . + 0 ID=cds1373;Parent=gene1412;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11 NC_005810.1 RefSeq gene 1488753 1489439 . + . ID=gene1413;Name=YP_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07095;old_locus_tag=YP1359%2CYP_1359 NC_005810.1 Protein Homology CDS 1488753 1489439 . + 0 ID=cds1374;Parent=gene1413;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_005810.1 RefSeq gene 1489439 1491175 . + . ID=gene1414;Name=YP_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07100;old_locus_tag=YP1360%2CYP_1360 NC_005810.1 Protein Homology CDS 1489439 1491175 . + 0 ID=cds1375;Parent=gene1414;Dbxref=Genbank:WP_002214568.1;Name=WP_002214568.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214568.1;transl_table=11 NC_005810.1 RefSeq gene 1491179 1491670 . + . ID=gene1415;Name=YP_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07105;old_locus_tag=YP1361%2CYP_1361 NC_005810.1 Protein Homology CDS 1491179 1491670 . + 0 ID=cds1376;Parent=gene1415;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1492039 1493743 . + . ID=id286;gbkey=repeat_region NC_005810.1 RefSeq gene 1492058 1494700 . + . ID=gene1416;Name=YP_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07110;old_locus_tag=YP1362%2CYP_1362 NC_005810.1 Protein Homology CDS 1492058 1494700 . + 0 ID=cds1377;Parent=gene1416;Dbxref=Genbank:WP_002211927.1;Name=WP_002211927.1;gbkey=CDS;product=ATPase;protein_id=WP_002211927.1;transl_table=11 NC_005810.1 RefSeq gene 1494703 1497051 . + . ID=gene1417;Name=YP_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07115;old_locus_tag=YP1363%2CYP_1363 NC_005810.1 Protein Homology CDS 1494703 1497051 . + 0 ID=cds1378;Parent=gene1417;Dbxref=Genbank:WP_002211928.1;Name=WP_002211928.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002211928.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1496410 1498533 . + . ID=id287;gbkey=repeat_region NC_005810.1 RefSeq gene 1497067 1499367 . + . ID=gene1418;Name=YP_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07120;old_locus_tag=YP1364%2CYP_1364 NC_005810.1 Protein Homology CDS 1497067 1499367 . + 0 ID=cds1379;Parent=gene1418;Dbxref=Genbank:WP_002211929.1;Name=WP_002211929.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211929.1;transl_table=11 NC_005810.1 RefSeq gene 1499364 1500137 . + . ID=gene1419;Name=YP_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07125;old_locus_tag=YP1365%2CYP_1365 NC_005810.1 Protein Homology CDS 1499364 1500137 . + 0 ID=cds1380;Parent=gene1419;Dbxref=Genbank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11 NC_005810.1 RefSeq gene 1500291 1500551 . + . ID=gene1420;Name=YP_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07130;old_locus_tag=YP1366%2CYP_1366 NC_005810.1 Protein Homology CDS 1500291 1500551 . + 0 ID=cds1381;Parent=gene1420;Dbxref=Genbank:WP_002211931.1;Name=WP_002211931.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211931.1;transl_table=11 NC_005810.1 RefSeq gene 1500567 1502750 . + . ID=gene1421;Name=YP_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07135;old_locus_tag=YP1367%2CYP_1367 NC_005810.1 Protein Homology CDS 1500567 1502750 . + 0 ID=cds1382;Parent=gene1421;Dbxref=Genbank:WP_002211932.1;Name=WP_002211932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211932.1;transl_table=11 NC_005810.1 RefSeq gene 1502923 1503393 . + . ID=gene1422;Name=YP_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07140;old_locus_tag=YP1368%2CYP_1368 NC_005810.1 Protein Homology CDS 1502923 1503393 . + 0 ID=cds1383;Parent=gene1422;Dbxref=Genbank:WP_002214564.1;Name=WP_002214564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214564.1;transl_table=11 NC_005810.1 RefSeq gene 1504126 1504446 . - . ID=gene1423;Name=YP_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07145;old_locus_tag=YP1369%2CYP_1369 NC_005810.1 Protein Homology CDS 1504126 1504446 . - 0 ID=cds1384;Parent=gene1423;Dbxref=Genbank:WP_002214561.1;Name=WP_002214561.1;gbkey=CDS;product=transposase;protein_id=WP_002214561.1;transl_table=11 NC_005810.1 RefSeq gene 1505558 1506790 . + . ID=gene1424;Name=YP_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07150;old_locus_tag=YP1370%2CYP_1370 NC_005810.1 Protein Homology CDS 1505558 1506790 . + 0 ID=cds1385;Parent=gene1424;Dbxref=Genbank:WP_002211935.1;Name=WP_002211935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211935.1;transl_table=11 NC_005810.1 RefSeq gene 1506787 1510209 . + . ID=gene1425;Name=YP_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07155;old_locus_tag=YP1371%2CYP_1371 NC_005810.1 Protein Homology CDS 1506787 1510209 . + 0 ID=cds1386;Parent=gene1425;Dbxref=Genbank:WP_002211936.1;Name=WP_002211936.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_002211936.1;transl_table=11 NC_005810.1 RefSeq gene 1510253 1511853 . + . ID=gene1426;Name=YP_RS07160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS07160;old_locus_tag=YP1372;pseudo=true NC_005810.1 Protein Homology CDS 1510253 1511853 . + 0 ID=cds1387;Parent=gene1426;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type VI secretion protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1511871 1512929 . + . ID=gene1427;Name=YP_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07165;old_locus_tag=YP1373%2CYP_1373 NC_005810.1 Protein Homology CDS 1511871 1512929 . + 0 ID=cds1388;Parent=gene1427;Dbxref=Genbank:WP_002211938.1;Name=WP_002211938.1;gbkey=CDS;product=PAAR domain protein;protein_id=WP_002211938.1;transl_table=11 NC_005810.1 RefSeq gene 1512944 1513399 . + . ID=gene1428;Name=YP_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07170;old_locus_tag=YP1374%2CYP_1374 NC_005810.1 Protein Homology CDS 1512944 1513399 . + 0 ID=cds1389;Parent=gene1428;Dbxref=Genbank:WP_002211939.1;Name=WP_002211939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211939.1;transl_table=11 NC_005810.1 RefSeq gene 1513620 1515383 . + . ID=gene1429;Name=YP_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07175;old_locus_tag=YP1375%2CYP_1375 NC_005810.1 Protein Homology CDS 1513620 1515383 . + 0 ID=cds1390;Parent=gene1429;Dbxref=Genbank:WP_002211940.1;Name=WP_002211940.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002211940.1;transl_table=11 NC_005810.1 RefSeq gene 1515347 1516432 . + . ID=gene1430;Name=YP_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07180;old_locus_tag=YP1376%2CYP_1376 NC_005810.1 Protein Homology CDS 1515347 1516432 . + 0 ID=cds1391;Parent=gene1430;Dbxref=Genbank:WP_002211941.1;Name=WP_002211941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211941.1;transl_table=11 NC_005810.1 RefSeq gene 1516407 1516988 . + . ID=gene1431;Name=YP_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07185;old_locus_tag=YP1377%2CYP_1377 NC_005810.1 Protein Homology CDS 1516407 1516988 . + 0 ID=cds1392;Parent=gene1431;Dbxref=Genbank:WP_002214552.1;Name=WP_002214552.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214552.1;transl_table=11 NC_005810.1 RefSeq gene 1516988 1517440 . + . ID=gene1432;Name=YP_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07190;old_locus_tag=YP1378%2CYP_1378 NC_005810.1 Protein Homology CDS 1516988 1517440 . + 0 ID=cds1393;Parent=gene1432;Dbxref=Genbank:WP_002211943.1;Name=WP_002211943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211943.1;transl_table=11 NC_005810.1 RefSeq gene 1517465 1518832 . + . ID=gene1433;Name=YP_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07195;old_locus_tag=YP1379%2CYP_1379 NC_005810.1 Protein Homology CDS 1517465 1518832 . + 0 ID=cds1394;Parent=gene1433;Dbxref=Genbank:WP_002211944.1;Name=WP_002211944.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211944.1;transl_table=11 NC_005810.1 RefSeq gene 1519044 1519667 . - . ID=gene1434;Name=YP_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07200;old_locus_tag=YP1380%2CYP_1380 NC_005810.1 Protein Homology CDS 1519044 1519667 . - 0 ID=cds1395;Parent=gene1434;Dbxref=Genbank:WP_002211945.1;Name=WP_002211945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211945.1;transl_table=11 NC_005810.1 RefSeq gene 1520374 1521945 . + . ID=gene1435;Name=YP_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07205;old_locus_tag=YP1381%2CYP_1381 NC_005810.1 Protein Homology CDS 1520374 1521945 . + 0 ID=cds1396;Parent=gene1435;Dbxref=Genbank:WP_002354043.1;Name=WP_002354043.1;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_002354043.1;transl_table=11 NC_005810.1 RefSeq gene 1522173 1522817 . + . ID=gene1436;Name=YP_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07210;old_locus_tag=YP1382%2CYP_1382 NC_005810.1 Protein Homology CDS 1522173 1522817 . + 0 ID=cds1397;Parent=gene1436;Dbxref=Genbank:WP_002230748.1;Name=WP_002230748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230748.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1522800 1524119 . + . ID=id288;gbkey=repeat_region NC_005810.1 RefSeq region 1522804 1524118 . - . ID=id289;gbkey=mobile_element NC_005810.1 RefSeq gene 1522839 1524047 . - . ID=gene1437;Name=YP_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07215;old_locus_tag=YP1383%2CYP_1383 NC_005810.1 Protein Homology CDS 1522839 1524047 . - 0 ID=cds1398;Parent=gene1437;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 1524214 1524984 . - . ID=gene1438;Name=YP_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07220;old_locus_tag=YP1384%2CYP_1384 NC_005810.1 Protein Homology CDS 1524214 1524984 . - 0 ID=cds1399;Parent=gene1438;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11 NC_005810.1 RefSeq gene 1524986 1526260 . - . ID=gene1439;Name=YP_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07225;old_locus_tag=YP1385%2CYP_1385 NC_005810.1 Protein Homology CDS 1524986 1526260 . - 0 ID=cds1400;Parent=gene1439;Dbxref=Genbank:WP_002211949.1;Name=WP_002211949.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_002211949.1;transl_table=11 NC_005810.1 RefSeq gene 1526795 1528105 . - . ID=gene1440;Name=YP_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07230;old_locus_tag=YP1386%2CYP_1386 NC_005810.1 Protein Homology CDS 1526795 1528105 . - 0 ID=cds1401;Parent=gene1440;Dbxref=Genbank:WP_002211950.1;Name=WP_002211950.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002211950.1;transl_table=11 NC_005810.1 RefSeq gene 1528115 1528783 . - . ID=gene1441;Name=YP_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07235;old_locus_tag=YP1387%2CYP_1387 NC_005810.1 Protein Homology CDS 1528115 1528783 . - 0 ID=cds1402;Parent=gene1441;Dbxref=Genbank:WP_002211951.1;Name=WP_002211951.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211951.1;transl_table=11 NC_005810.1 RefSeq gene 1528785 1530047 . - . ID=gene1442;Name=YP_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07240;old_locus_tag=YP1388%2CYP_1388 NC_005810.1 Protein Homology CDS 1528785 1530047 . - 0 ID=cds1403;Parent=gene1442;Dbxref=Genbank:WP_002211952.1;Name=WP_002211952.1;gbkey=CDS;product=RND transporter;protein_id=WP_002211952.1;transl_table=11 NC_005810.1 RefSeq gene 1530049 1532409 . - . ID=gene1443;Name=YP_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07245;old_locus_tag=YP1389%2CYP_1389 NC_005810.1 Protein Homology CDS 1530049 1532409 . - 0 ID=cds1404;Parent=gene1443;Dbxref=Genbank:WP_002215886.1;Name=WP_002215886.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215886.1;transl_table=11 NC_005810.1 RefSeq gene 1532493 1532693 . - . ID=gene1444;Name=YP_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07250;old_locus_tag=YP1390%2CYP_1390 NC_005810.1 Protein Homology CDS 1532493 1532693 . - 0 ID=cds1405;Parent=gene1444;Dbxref=Genbank:WP_002211954.1;Name=WP_002211954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211954.1;transl_table=11 NC_005810.1 RefSeq gene 1532962 1533804 . - . ID=gene1445;Name=YP_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07260;old_locus_tag=YP1391%2CYP_1391 NC_005810.1 Protein Homology CDS 1532962 1533804 . - 0 ID=cds1406;Parent=gene1445;Dbxref=Genbank:WP_002211956.1;Name=WP_002211956.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_002211956.1;transl_table=11 NC_005810.1 RefSeq gene 1533825 1534964 . - . ID=gene1446;Name=YP_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07265;old_locus_tag=YP1392%2CYP_1392 NC_005810.1 Protein Homology CDS 1533825 1534964 . - 0 ID=cds1407;Parent=gene1446;Dbxref=Genbank:WP_002224699.1;Name=WP_002224699.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002224699.1;transl_table=11 NC_005810.1 RefSeq gene 1535238 1536107 . - . ID=gene1447;Name=YP_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07270;old_locus_tag=YP1393%2CYP_1393 NC_005810.1 Protein Homology CDS 1535238 1536107 . - 0 ID=cds1408;Parent=gene1447;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11 NC_005810.1 RefSeq gene 1536243 1537394 . + . ID=gene1448;Name=YP_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07275;old_locus_tag=YP1394%2CYP_1394 NC_005810.1 Protein Homology CDS 1536243 1537394 . + 0 ID=cds1409;Parent=gene1448;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11 NC_005810.1 RefSeq gene 1537578 1538240 . + . ID=gene1449;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YP_RS07280;old_locus_tag=YP1395%2CYP_1395 NC_005810.1 Protein Homology CDS 1537578 1538240 . + 0 ID=cds1410;Parent=gene1449;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11 NC_005810.1 RefSeq gene 1538295 1539461 . + . ID=gene1450;Name=YP_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07285;old_locus_tag=YP1396%2CYP_1396 NC_005810.1 Protein Homology CDS 1538295 1539461 . + 0 ID=cds1411;Parent=gene1450;Dbxref=Genbank:WP_002211961.1;Name=WP_002211961.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211961.1;transl_table=11 NC_005810.1 RefSeq gene 1540209 1541201 . + . ID=gene1451;Name=YP_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07290;old_locus_tag=YP1397%2CYP_1397 NC_005810.1 Protein Homology CDS 1540209 1541201 . + 0 ID=cds1412;Parent=gene1451;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11 NC_005810.1 RefSeq gene 1541431 1542951 . + . ID=gene1452;Name=YP_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07295;old_locus_tag=YP1398%2CYP_1398 NC_005810.1 Protein Homology CDS 1541431 1542951 . + 0 ID=cds1413;Parent=gene1452;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NC_005810.1 RefSeq gene 1542972 1543982 . + . ID=gene1453;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YP_RS07300;old_locus_tag=YP1399%2CYP_1399 NC_005810.1 Protein Homology CDS 1542972 1543982 . + 0 ID=cds1414;Parent=gene1453;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11 NC_005810.1 RefSeq gene 1544427 1545164 . - . ID=gene1454;Name=YP_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07305;old_locus_tag=YP1400%2CYP_1400 NC_005810.1 Protein Homology CDS 1544427 1545164 . - 0 ID=cds1415;Parent=gene1454;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11 NC_005810.1 RefSeq gene 1545445 1547142 . - . ID=gene1455;Name=YP_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07310;old_locus_tag=YP1401%2CYP_1401 NC_005810.1 Protein Homology CDS 1545445 1547142 . - 0 ID=cds1416;Parent=gene1455;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NC_005810.1 RefSeq gene 1547498 1548382 . - . ID=gene1456;Name=YP_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07315;old_locus_tag=YP1402%2CYP_1402 NC_005810.1 Protein Homology CDS 1547498 1548382 . - 0 ID=cds1417;Parent=gene1456;Dbxref=Genbank:WP_002211969.1;Name=WP_002211969.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NC_005810.1 RefSeq gene 1548708 1549403 . - . ID=gene1457;Name=YP_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07320;old_locus_tag=YP1403%2CYP_1403 NC_005810.1 Protein Homology CDS 1548708 1549403 . - 0 ID=cds1418;Parent=gene1457;Dbxref=Genbank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211970.1;transl_table=11 NC_005810.1 RefSeq gene 1549400 1549807 . - . ID=gene1458;Name=YP_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07325;old_locus_tag=YP1404%2CYP_1404 NC_005810.1 Protein Homology CDS 1549400 1549807 . - 0 ID=cds1419;Parent=gene1458;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11 NC_005810.1 RefSeq gene 1550049 1551230 . - . ID=gene1459;Name=YP_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07330;old_locus_tag=YP1405%2CYP_1405 NC_005810.1 Protein Homology CDS 1550049 1551230 . - 0 ID=cds1420;Parent=gene1459;Dbxref=Genbank:WP_002211973.1;Name=WP_002211973.1;gbkey=CDS;product=multidrug resistance protein;protein_id=WP_002211973.1;transl_table=11 NC_005810.1 RefSeq gene 1551544 1552797 . - . ID=gene1460;Name=YP_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07335;old_locus_tag=YP1406%2CYP_1406 NC_005810.1 Protein Homology CDS 1551544 1552797 . - 0 ID=cds1421;Parent=gene1460;Dbxref=Genbank:WP_002211974.1;Name=WP_002211974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211974.1;transl_table=11 NC_005810.1 RefSeq gene 1552815 1553891 . - . ID=gene1461;Name=YP_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07340;old_locus_tag=YP1407%2CYP_1407 NC_005810.1 Protein Homology CDS 1552815 1553891 . - 0 ID=cds1422;Parent=gene1461;Dbxref=Genbank:WP_002211975.1;Name=WP_002211975.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002211975.1;transl_table=11 NC_005810.1 RefSeq gene 1554589 1555251 . + . ID=gene1462;Name=YP_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07345;old_locus_tag=YP1408 NC_005810.1 Protein Homology CDS 1554589 1555251 . + 0 ID=cds1423;Parent=gene1462;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11 NC_005810.1 RefSeq gene 1555291 1555479 . + . ID=gene1463;Name=YP_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07350;old_locus_tag=YP1409%2CYP_1409 NC_005810.1 Protein Homology CDS 1555291 1555479 . + 0 ID=cds1424;Parent=gene1463;Dbxref=Genbank:WP_011171814.1;Name=WP_011171814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171814.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1555315 1556038 . + . ID=id290;gbkey=repeat_region NC_005810.1 RefSeq region 1555324 1556035 . + . ID=id291;gbkey=mobile_element NC_005810.1 RefSeq gene 1555469 1555927 . + . ID=gene1464;Name=YP_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07355;old_locus_tag=YP1410%2CYP_1410 NC_005810.1 Protein Homology CDS 1555469 1555927 . + 0 ID=cds1425;Parent=gene1464;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 1556091 1558118 . - . ID=gene1465;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YP_RS07360;old_locus_tag=YP1411%2CYP_1411 NC_005810.1 Protein Homology CDS 1556091 1558118 . - 0 ID=cds1426;Parent=gene1465;Dbxref=Genbank:WP_002211870.1;Name=WP_002211870.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_002211870.1;transl_table=11 NC_005810.1 RefSeq gene 1558383 1559495 . + . ID=gene1466;Name=YP_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07365;old_locus_tag=YP1412%2CYP_1412 NC_005810.1 Protein Homology CDS 1558383 1559495 . + 0 ID=cds1427;Parent=gene1466;Dbxref=Genbank:WP_002211871.1;Name=WP_002211871.1;gbkey=CDS;product=ATPase;protein_id=WP_002211871.1;transl_table=11 NC_005810.1 RefSeq gene 1559740 1560381 . + . ID=gene1467;Name=YP_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07370;old_locus_tag=YP1413%2CYP_1413 NC_005810.1 Protein Homology CDS 1559740 1560381 . + 0 ID=cds1428;Parent=gene1467;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NC_005810.1 RefSeq gene 1560486 1561067 . + . ID=gene1468;Name=YP_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07375;old_locus_tag=YP1414%2CYP_1414 NC_005810.1 Protein Homology CDS 1560486 1561067 . + 0 ID=cds1429;Parent=gene1468;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11 NC_005810.1 RefSeq gene 1561254 1563110 . + . ID=gene1469;Name=YP_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07380;old_locus_tag=YP1415%2CYP_1415 NC_005810.1 Protein Homology CDS 1561254 1563110 . + 0 ID=cds1430;Parent=gene1469;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1563132 1563157 . + . ID=id292;Note=degenerate repeat region containing 2 copies of a 13bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1563255 1564841 . - . ID=gene1470;Name=YP_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07385;old_locus_tag=YP1416%2CYP_1416 NC_005810.1 Protein Homology CDS 1563255 1564841 . - 0 ID=cds1431;Parent=gene1470;Dbxref=Genbank:WP_002211875.1;Name=WP_002211875.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211875.1;transl_table=11 NC_005810.1 RefSeq gene 1565283 1566062 . + . ID=gene1471;Name=YP_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07390;old_locus_tag=YP1417%2CYP_1417 NC_005810.1 Protein Homology CDS 1565283 1566062 . + 0 ID=cds1432;Parent=gene1471;Dbxref=Genbank:WP_002211876.1;Name=WP_002211876.1;gbkey=CDS;product=iron reductase;protein_id=WP_002211876.1;transl_table=11 NC_005810.1 RefSeq gene 1566214 1567761 . + . ID=gene1472;Name=YP_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07395;old_locus_tag=YP1418%2CYP_1418 NC_005810.1 Protein Homology CDS 1566214 1567761 . + 0 ID=cds1433;Parent=gene1472;Dbxref=Genbank:WP_002211877.1;Name=WP_002211877.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_002211877.1;transl_table=11 NC_005810.1 RefSeq gene 1567796 1569094 . + . ID=gene1473;Name=YP_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07400;old_locus_tag=YP1419%2CYP_1419 NC_005810.1 Protein Homology CDS 1567796 1569094 . + 0 ID=cds1434;Parent=gene1473;Dbxref=Genbank:WP_002211878.1;Name=WP_002211878.1;gbkey=CDS;product=lysine N6-hydroxylase/L-ornithine N5-oxygenase family;protein_id=WP_002211878.1;transl_table=11 NC_005810.1 RefSeq gene 1569094 1569672 . + . ID=gene1474;Name=YP_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07405;old_locus_tag=YP1420%2CYP_1420 NC_005810.1 Protein Homology CDS 1569094 1569672 . + 0 ID=cds1435;Parent=gene1474;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11 NC_005810.1 RefSeq gene 1569669 1571513 . + . ID=gene1475;Name=YP_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07410;old_locus_tag=YP1421%2CYP_1421 NC_005810.1 Protein Homology CDS 1569669 1571513 . + 0 ID=cds1436;Parent=gene1475;Dbxref=Genbank:WP_002215001.1;Name=WP_002215001.1;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=WP_002215001.1;transl_table=11 NC_005810.1 RefSeq gene 1571622 1572440 . - . ID=gene1476;Name=YP_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07415;old_locus_tag=YP1422%2CYP_1422 NC_005810.1 Protein Homology CDS 1571622 1572440 . - 0 ID=cds1437;Parent=gene1476;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11 NC_005810.1 RefSeq gene 1572467 1573507 . - . ID=gene1477;Name=YP_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07420;old_locus_tag=YP1423%2CYP_1423 NC_005810.1 Protein Homology CDS 1572467 1573507 . - 0 ID=cds1438;Parent=gene1477;Dbxref=Genbank:WP_002211880.1;Name=WP_002211880.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211880.1;transl_table=11 NC_005810.1 RefSeq gene 1573494 1574534 . - . ID=gene1478;Name=YP_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07425;old_locus_tag=YP1424%2CYP_1424 NC_005810.1 Protein Homology CDS 1573494 1574534 . - 0 ID=cds1439;Parent=gene1478;Dbxref=Genbank:WP_002211881.1;Name=WP_002211881.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211881.1;transl_table=11 NC_005810.1 RefSeq gene 1574531 1575610 . - . ID=gene1479;Name=YP_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07430;old_locus_tag=YP1425%2CYP_1425 NC_005810.1 Protein Homology CDS 1574531 1575610 . - 0 ID=cds1440;Parent=gene1479;Dbxref=Genbank:WP_002211882.1;Name=WP_002211882.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_002211882.1;transl_table=11 NC_005810.1 RefSeq gene 1575700 1577961 . - . ID=gene1480;Name=YP_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07435;old_locus_tag=YP1426%2CYP_1426 NC_005810.1 Protein Homology CDS 1575700 1577961 . - 0 ID=cds1441;Parent=gene1480;Dbxref=Genbank:WP_002211883.1;Name=WP_002211883.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211883.1;transl_table=11 NC_005810.1 RefSeq gene 1578174 1579988 . - . ID=gene1481;Name=YP_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07440;old_locus_tag=YP1427%2CYP_1427 NC_005810.1 Protein Homology CDS 1578174 1579988 . - 0 ID=cds1442;Parent=gene1481;Dbxref=Genbank:WP_002211884.1;Name=WP_002211884.1;gbkey=CDS;product=siderophore biosynthesis protein%2C IucA/IucC family;protein_id=WP_002211884.1;transl_table=11 NC_005810.1 RefSeq gene 1580934 1581824 . + . ID=gene1482;Name=YP_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07445;old_locus_tag=YP1428%2CYP_1428 NC_005810.1 Protein Homology CDS 1580934 1581824 . + 0 ID=cds1443;Parent=gene1482;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11 NC_005810.1 RefSeq gene 1581908 1582801 . + . ID=gene1483;Name=YP_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07450;old_locus_tag=YP1429%2CYP_1429 NC_005810.1 Protein Homology CDS 1581908 1582801 . + 0 ID=cds1444;Parent=gene1483;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11 NC_005810.1 RefSeq gene 1583187 1584596 . + . ID=gene1484;Name=YP_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07455;old_locus_tag=YP1430%2CYP_1430 NC_005810.1 Protein Homology CDS 1583187 1584596 . + 0 ID=cds1445;Parent=gene1484;Dbxref=Genbank:WP_041175914.1;Name=WP_041175914.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_041175914.1;transl_table=11 NC_005810.1 RefSeq gene 1584796 1585410 . - . ID=gene1485;Name=YP_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07460;old_locus_tag=YP1431%2CYP_1431 NC_005810.1 Protein Homology CDS 1584796 1585410 . - 0 ID=cds1446;Parent=gene1485;Dbxref=Genbank:WP_002211889.1;Name=WP_002211889.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisIE;protein_id=WP_002211889.1;transl_table=11 NC_005810.1 RefSeq gene 1585404 1586180 . - . ID=gene1486;Name=YP_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07465;old_locus_tag=YP1432%2CYP_1432 NC_005810.1 Protein Homology CDS 1585404 1586180 . - 0 ID=cds1447;Parent=gene1486;Dbxref=Genbank:WP_002211890.1;Name=WP_002211890.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11 NC_005810.1 RefSeq gene 1586162 1586899 . - . ID=gene1487;Name=YP_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07470;old_locus_tag=YP1433%2CYP_1433 NC_005810.1 Protein Homology CDS 1586162 1586899 . - 0 ID=cds1448;Parent=gene1487;Dbxref=Genbank:WP_011171818.1;Name=WP_011171818.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_011171818.1;transl_table=11 NC_005810.1 RefSeq gene 1586905 1587495 . - . ID=gene1488;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YP_RS07475;old_locus_tag=YP1434%2CYP_1434 NC_005810.1 Protein Homology CDS 1586905 1587495 . - 0 ID=cds1449;Parent=gene1488;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NC_005810.1 RefSeq gene 1587495 1588562 . - . ID=gene1489;Name=YP_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07480;old_locus_tag=YP1435%2CYP_1435 NC_005810.1 Protein Homology CDS 1587495 1588562 . - 0 ID=cds1450;Parent=gene1489;Dbxref=Genbank:WP_002211893.1;Name=WP_002211893.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisB;protein_id=WP_002211893.1;transl_table=11 NC_005810.1 RefSeq gene 1588559 1589707 . - . ID=gene1490;Name=YP_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07485;old_locus_tag=YP1436%2CYP_1436 NC_005810.1 Protein Homology CDS 1588559 1589707 . - 0 ID=cds1451;Parent=gene1490;Dbxref=Genbank:WP_002211894.1;Name=WP_002211894.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_002211894.1;transl_table=11 NC_005810.1 RefSeq gene 1589710 1591041 . - . ID=gene1491;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YP_RS07490;old_locus_tag=YP1437%2CYP_1437 NC_005810.1 Protein Homology CDS 1589710 1591041 . - 0 ID=cds1452;Parent=gene1491;Dbxref=Genbank:WP_002211895.1;Name=WP_002211895.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NC_005810.1 RefSeq gene 1591045 1591944 . - . ID=gene1492;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YP_RS07495;old_locus_tag=YP1438%2CYP_1438 NC_005810.1 Protein Homology CDS 1591045 1591944 . - 0 ID=cds1453;Parent=gene1492;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NC_005810.1 RefSeq gene 1592650 1593477 . + . ID=gene1493;Name=YP_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07500;old_locus_tag=YP1440%2CYP_1440 NC_005810.1 Protein Homology CDS 1592650 1593477 . + 0 ID=cds1454;Parent=gene1493;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11 NC_005810.1 RefSeq gene 1593632 1594066 . - . ID=gene1494;Name=YP_RS07505;gbkey=Gene;gene_biotype=other;locus_tag=YP_RS07505;old_locus_tag=YP1441%2CYP_1441 NC_005810.1 RefSeq repeat_region 1593975 1594081 . + . ID=id293;gbkey=repeat_region NC_005810.1 RefSeq gene 1594311 1595306 . - . ID=gene1495;Name=YP_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07510;old_locus_tag=YP1442%2CYP_1442 NC_005810.1 Protein Homology CDS 1594311 1595306 . - 0 ID=cds1455;Parent=gene1495;Dbxref=Genbank:WP_002211900.1;Name=WP_002211900.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211900.1;transl_table=11 NC_005810.1 RefSeq gene 1595303 1595992 . - . ID=gene1496;Name=YP_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07515 NC_005810.1 Protein Homology CDS 1595303 1595992 . - 0 ID=cds1456;Parent=gene1496;Dbxref=Genbank:WP_002216310.1;Name=WP_002216310.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216310.1;transl_table=11 NC_005810.1 RefSeq gene 1595950 1596843 . - . ID=gene1497;Name=YP_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07520 NC_005810.1 Protein Homology CDS 1595950 1596843 . - 0 ID=cds1457;Parent=gene1497;Dbxref=Genbank:WP_002216311.1;Name=WP_002216311.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216311.1;transl_table=11 NC_005810.1 RefSeq gene 1597129 1598220 . + . ID=gene1498;Name=YP_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07525;old_locus_tag=YP1444%2CYP_1444 NC_005810.1 Protein Homology CDS 1597129 1598220 . + 0 ID=cds1458;Parent=gene1498;Dbxref=Genbank:WP_002216312.1;Name=WP_002216312.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11 NC_005810.1 RefSeq gene 1598475 1598690 . + . ID=gene1499;Name=YP_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07530 NC_005810.1 Protein Homology CDS 1598475 1598690 . + 0 ID=cds1459;Parent=gene1499;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NC_005810.1 RefSeq gene 1598680 1600071 . + . ID=gene1500;Name=YP_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07535;old_locus_tag=YP1445%2CYP_1445 NC_005810.1 Protein Homology CDS 1598680 1600071 . + 0 ID=cds1460;Parent=gene1500;Dbxref=Genbank:WP_002211902.1;Name=WP_002211902.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_002211902.1;transl_table=11 NC_005810.1 RefSeq gene 1600688 1602118 . - . ID=gene1501;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YP_RS07540;old_locus_tag=YP1446%2CYP_1446 NC_005810.1 Protein Homology CDS 1600688 1602118 . - 0 ID=cds1461;Parent=gene1501;Dbxref=Genbank:WP_002211904.1;Name=WP_002211904.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_002211904.1;transl_table=11 NC_005810.1 RefSeq gene 1602411 1603520 . + . ID=gene1502;Name=YP_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07545;old_locus_tag=YP1447%2CYP_1447 NC_005810.1 Protein Homology CDS 1602411 1603520 . + 0 ID=cds1462;Parent=gene1502;Dbxref=Genbank:WP_002211905.1;Name=WP_002211905.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_002211905.1;transl_table=11 NC_005810.1 RefSeq gene 1603954 1604271 . + . ID=gene1503;Name=YP_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07550;old_locus_tag=YP1448%2CYP_1448 NC_005810.1 Protein Homology CDS 1603954 1604271 . + 0 ID=cds1463;Parent=gene1503;Dbxref=Genbank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217522.1;transl_table=11 NC_005810.1 RefSeq gene 1604775 1607645 . - . ID=gene1504;Name=YP_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07555;old_locus_tag=YP1449 NC_005810.1 Protein Homology CDS 1604775 1607645 . - 0 ID=cds1464;Parent=gene1504;Dbxref=Genbank:WP_002230727.1;Name=WP_002230727.1;gbkey=CDS;product=adhesin;protein_id=WP_002230727.1;transl_table=11 NC_005810.1 RefSeq gene 1608671 1609975 . + . ID=gene1505;Name=YP_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07560;old_locus_tag=YP1451%2CYP_1451 NC_005810.1 Protein Homology CDS 1608671 1609975 . + 0 ID=cds1465;Parent=gene1505;Dbxref=Genbank:WP_002211911.1;Name=WP_002211911.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211911.1;transl_table=11 NC_005810.1 RefSeq gene 1609984 1610406 . - . ID=gene1506;Name=YP_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07565;old_locus_tag=YP1452%2CYP_1452 NC_005810.1 Protein Homology CDS 1609984 1610406 . - 0 ID=cds1466;Parent=gene1506;Dbxref=Genbank:WP_002211912.1;Name=WP_002211912.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_002211912.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1610449 1610505 . + . ID=id294;Note=degenerate repeat region containing 3 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1610834 1611574 . + . ID=gene1507;Name=YP_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07570;old_locus_tag=YP1453%2CYP_1453 NC_005810.1 Protein Homology CDS 1610834 1611574 . + 0 ID=cds1467;Parent=gene1507;Dbxref=Genbank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216393.1;transl_table=11 NC_005810.1 RefSeq gene 1611622 1612464 . + . ID=gene1508;Name=YP_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07575;old_locus_tag=YP1454%2CYP_1454 NC_005810.1 Protein Homology CDS 1611622 1612464 . + 0 ID=cds1468;Parent=gene1508;Dbxref=Genbank:WP_002211916.1;Name=WP_002211916.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211916.1;transl_table=11 NC_005810.1 RefSeq gene 1612496 1613773 . + . ID=gene1509;Name=YP_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07580;old_locus_tag=YP1455%2CYP_1455 NC_005810.1 Protein Homology CDS 1612496 1613773 . + 0 ID=cds1469;Parent=gene1509;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NC_005810.1 RefSeq gene 1614070 1615215 . + . ID=gene1510;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YP_RS07585;old_locus_tag=YP1457%2CYP_1457 NC_005810.1 Protein Homology CDS 1614070 1615215 . + 0 ID=cds1470;Parent=gene1510;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11 NC_005810.1 RefSeq gene 1615420 1616787 . - . ID=gene1511;Name=YP_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07590;old_locus_tag=YP1458%2CYP_1458 NC_005810.1 Protein Homology CDS 1615420 1616787 . - 0 ID=cds1471;Parent=gene1511;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NC_005810.1 RefSeq gene 1617114 1618511 . + . ID=gene1512;Name=YP_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07595;old_locus_tag=YP1459%2CYP_1459 NC_005810.1 Protein Homology CDS 1617114 1618511 . + 0 ID=cds1472;Parent=gene1512;Dbxref=Genbank:WP_002354070.1;Name=WP_002354070.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_002354070.1;transl_table=11 NC_005810.1 RefSeq gene 1618539 1619879 . - . ID=gene1513;Name=YP_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07600;old_locus_tag=YP1460%2CYP_1460 NC_005810.1 Protein Homology CDS 1618539 1619879 . - 0 ID=cds1473;Parent=gene1513;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11 NC_005810.1 RefSeq gene 1619915 1620796 . - . ID=gene1514;Name=YP_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07605;old_locus_tag=YP1461%2CYP_1461 NC_005810.1 Protein Homology CDS 1619915 1620796 . - 0 ID=cds1474;Parent=gene1514;Dbxref=Genbank:WP_002211923.1;Name=WP_002211923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211923.1;transl_table=11 NC_005810.1 RefSeq gene 1621373 1622068 . + . ID=gene1515;Name=YP_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07610;old_locus_tag=YP1462%2CYP_1462 NC_005810.1 Protein Homology CDS 1621373 1622068 . + 0 ID=cds1475;Parent=gene1515;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NC_005810.1 RefSeq gene 1622158 1622697 . + . ID=gene1516;Name=YP_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07615;old_locus_tag=YP1463%2CYP_1463 NC_005810.1 Protein Homology CDS 1622158 1622697 . + 0 ID=cds1476;Parent=gene1516;Dbxref=Genbank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211926.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1622725 1622756 . + . ID=id295;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1623042 1623148 . + . ID=id296;gbkey=repeat_region NC_005810.1 RefSeq gene 1623043 1623118 . - . ID=gene1517;Name=YP_RS07620;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS07620;old_locus_tag=tRNA-Asn_1%2CYP_t29 NC_005810.1 tRNAscan-SE tRNA 1623043 1623118 . - . ID=rna36;Parent=gene1517;anticodon=(pos:complement(1623083..1623085));gbkey=tRNA;product=tRNA-Asn NC_005810.1 tRNAscan-SE exon 1623043 1623118 . - . ID=id297;Parent=rna36;anticodon=(pos:complement(1623083..1623085));gbkey=tRNA;product=tRNA-Asn NC_005810.1 RefSeq gene 1623564 1624193 . - . ID=gene1518;Name=YP_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07625;old_locus_tag=YP1464%2CYP_1464 NC_005810.1 Protein Homology CDS 1623564 1624193 . - 0 ID=cds1477;Parent=gene1518;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11 NC_005810.1 RefSeq gene 1624450 1625742 . - . ID=gene1519;Name=YP_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07630;old_locus_tag=YP1465%2CYP_1465 NC_005810.1 Protein Homology CDS 1624450 1625742 . - 0 ID=cds1478;Parent=gene1519;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11 NC_005810.1 RefSeq gene 1625762 1626268 . - . ID=gene1520;Name=YP_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07635;old_locus_tag=YP1466%2CYP_1466 NC_005810.1 Protein Homology CDS 1625762 1626268 . - 0 ID=cds1479;Parent=gene1520;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11 NC_005810.1 RefSeq gene 1626392 1627384 . - . ID=gene1521;Name=YP_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07640;old_locus_tag=YP1467%2CYP_1467 NC_005810.1 Protein Homology CDS 1626392 1627384 . - 0 ID=cds1480;Parent=gene1521;Dbxref=Genbank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213121.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1627493 1627546 . + . ID=id298;Note=degenerate repeat region containing 2 copies of a 27bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1627907 1628647 . + . ID=gene1522;Name=YP_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07645;old_locus_tag=YP1468%2CYP_1468 NC_005810.1 Protein Homology CDS 1627907 1628647 . + 0 ID=cds1481;Parent=gene1522;Dbxref=Genbank:WP_002213120.1;Name=WP_002213120.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_002213120.1;transl_table=11 NC_005810.1 RefSeq gene 1628853 1629017 . - . ID=gene1523;Name=YP_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07650 NC_005810.1 Protein Homology CDS 1628853 1629017 . - 0 ID=cds1482;Parent=gene1523;Dbxref=Genbank:WP_002216586.1;Name=WP_002216586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216586.1;transl_table=11 NC_005810.1 RefSeq gene 1629034 1631160 . - . ID=gene1524;Name=YP_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07655;old_locus_tag=YP1469%2CYP_1469 NC_005810.1 Protein Homology CDS 1629034 1631160 . - 0 ID=cds1483;Parent=gene1524;Dbxref=Genbank:WP_002230722.1;Name=WP_002230722.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_002230722.1;transl_table=11 NC_005810.1 RefSeq gene 1631238 1632545 . - . ID=gene1525;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=YP_RS07660;old_locus_tag=YP1470%2CYP_1470 NC_005810.1 Protein Homology CDS 1631238 1632545 . - 0 ID=cds1484;Parent=gene1525;Dbxref=Genbank:WP_002230721.1;Name=WP_002230721.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_002230721.1;transl_table=11 NC_005810.1 RefSeq gene 1632626 1633642 . + . ID=gene1526;Name=YP_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07665;old_locus_tag=YP1471%2CYP_1471 NC_005810.1 Protein Homology CDS 1632626 1633642 . + 0 ID=cds1485;Parent=gene1526;Dbxref=Genbank:WP_002230719.1;Name=WP_002230719.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230719.1;transl_table=11 NC_005810.1 RefSeq gene 1633790 1633865 . - . ID=gene1527;Name=YP_RS07670;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS07670;old_locus_tag=tRNA-Asn_2%2CYP_t30 NC_005810.1 tRNAscan-SE tRNA 1633790 1633865 . - . ID=rna37;Parent=gene1527;anticodon=(pos:complement(1633830..1633832));gbkey=tRNA;product=tRNA-Asn NC_005810.1 tRNAscan-SE exon 1633790 1633865 . - . ID=id299;Parent=rna37;anticodon=(pos:complement(1633830..1633832));gbkey=tRNA;product=tRNA-Asn NC_005810.1 RefSeq gene 1634043 1634855 . - . ID=gene1528;Name=YP_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07675;old_locus_tag=YP1472%2CYP_1472 NC_005810.1 Protein Homology CDS 1634043 1634855 . - 0 ID=cds1486;Parent=gene1528;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11 NC_005810.1 RefSeq gene 1634871 1635059 . + . ID=gene1529;Name=YP_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07680 NC_005810.1 Protein Homology CDS 1634871 1635059 . + 0 ID=cds1487;Parent=gene1529;Dbxref=Genbank:WP_002216490.1;Name=WP_002216490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216490.1;transl_table=11 NC_005810.1 RefSeq gene 1635245 1635529 . - . ID=gene1530;Name=YP_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07685;old_locus_tag=YP1473%2CYP_1473 NC_005810.1 Protein Homology CDS 1635245 1635529 . - 0 ID=cds1488;Parent=gene1530;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11 NC_005810.1 RefSeq gene 1635766 1636617 . - . ID=gene1531;Name=YP_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07690;old_locus_tag=YP1474%2CYP_1474 NC_005810.1 Protein Homology CDS 1635766 1636617 . - 0 ID=cds1489;Parent=gene1531;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11 NC_005810.1 RefSeq gene 1636720 1638438 . - . ID=gene1532;Name=YP_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07695;old_locus_tag=YP1475%2CYP_1475 NC_005810.1 Protein Homology CDS 1636720 1638438 . - 0 ID=cds1490;Parent=gene1532;Dbxref=Genbank:WP_002211045.1;Name=WP_002211045.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11 NC_005810.1 RefSeq gene 1639094 1639258 . + . ID=gene1533;Name=YP_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07700;old_locus_tag=YP1477%2CYP_1477 NC_005810.1 Protein Homology CDS 1639094 1639258 . + 0 ID=cds1491;Parent=gene1533;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11 NC_005810.1 RefSeq gene 1639340 1639726 . - . ID=gene1534;Name=YP_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07705;old_locus_tag=YP1478%2CYP_1478 NC_005810.1 Protein Homology CDS 1639340 1639726 . - 0 ID=cds1492;Parent=gene1534;Dbxref=Genbank:WP_002224436.1;Name=WP_002224436.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002224436.1;transl_table=11 NC_005810.1 RefSeq gene 1639957 1640070 . + . ID=gene1535;Name=YP_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07710 NC_005810.1 Protein Homology CDS 1639957 1640070 . + 0 ID=cds1493;Parent=gene1535;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11 NC_005810.1 RefSeq gene 1640282 1640521 . + . ID=gene1536;Name=YP_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07715;old_locus_tag=YP1479%2CYP_1479 NC_005810.1 Protein Homology CDS 1640282 1640521 . + 0 ID=cds1494;Parent=gene1536;Dbxref=Genbank:WP_002211050.1;Name=WP_002211050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211050.1;transl_table=11 NC_005810.1 RefSeq gene 1640612 1640845 . - . ID=gene1537;Name=YP_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07720;old_locus_tag=YP1480%2CYP_1480 NC_005810.1 Protein Homology CDS 1640612 1640845 . - 0 ID=cds1495;Parent=gene1537;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11 NC_005810.1 RefSeq gene 1641428 1641703 . + . ID=gene1538;Name=YP_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07725;old_locus_tag=YP1481%2CYP_1481 NC_005810.1 Protein Homology CDS 1641428 1641703 . + 0 ID=cds1496;Parent=gene1538;Dbxref=Genbank:WP_002216495.1;Name=WP_002216495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216495.1;transl_table=11 NC_005810.1 RefSeq gene 1641966 1642265 . + . ID=gene1539;Name=YP_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07730;old_locus_tag=YP1482%2CYP_1482 NC_005810.1 Protein Homology CDS 1641966 1642265 . + 0 ID=cds1497;Parent=gene1539;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11 NC_005810.1 RefSeq gene 1642374 1642619 . + . ID=gene1540;Name=YP_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07735;old_locus_tag=YP1483 NC_005810.1 Protein Homology CDS 1642374 1642619 . + 0 ID=cds1498;Parent=gene1540;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1642604 1642631 . + . ID=id300;Note=exact repeat region containing 2 copies of a 14 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1642870 1644243 . + . ID=gene1541;Name=YP_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07740;old_locus_tag=YP1484%2CYP_1484 NC_005810.1 Protein Homology CDS 1642870 1644243 . + 0 ID=cds1499;Parent=gene1541;Dbxref=Genbank:WP_002211055.1;Name=WP_002211055.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002211055.1;transl_table=11 NC_005810.1 RefSeq gene 1644548 1645147 . - . ID=gene1542;Name=YP_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07745;old_locus_tag=YP1485%2CYP_1485 NC_005810.1 Protein Homology CDS 1644548 1645147 . - 0 ID=cds1500;Parent=gene1542;Dbxref=Genbank:WP_002221007.1;Name=WP_002221007.1;gbkey=CDS;product=lipid A palmitoyltransferase PagP;protein_id=WP_002221007.1;transl_table=11 NC_005810.1 RefSeq gene 1645162 1645383 . + . ID=gene1543;Name=YP_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07750 NC_005810.1 Protein Homology CDS 1645162 1645383 . + 0 ID=cds1501;Parent=gene1543;Dbxref=Genbank:WP_002430102.1;Name=WP_002430102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430102.1;transl_table=11 NC_005810.1 cmsearch region 1646132 1646560 . + . ID=id301;Note=cspA;gbkey=misc_feature NC_005810.1 RefSeq gene 1646149 1646265 . + . ID=gene1544;Name=YP_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07755 NC_005810.1 Protein Homology CDS 1646149 1646265 . + 0 ID=cds1502;Parent=gene1544;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11 NC_005810.1 RefSeq gene 1646308 1646517 . + . ID=gene1545;Name=YP_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07760;old_locus_tag=YP1486%2CYP_1486 NC_005810.1 Protein Homology CDS 1646308 1646517 . + 0 ID=cds1503;Parent=gene1545;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11 NC_005810.1 RefSeq gene 1646608 1647381 . - . ID=gene1546;Name=YP_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07765;old_locus_tag=YP1487%2CYP_1487 NC_005810.1 Protein Homology CDS 1646608 1647381 . - 0 ID=cds1504;Parent=gene1546;Dbxref=Genbank:WP_011171824.1;Name=WP_011171824.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_011171824.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1646753 1646806 . + . ID=id302;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1647566 1647607 . + . ID=id303;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1647777 1648616 . + . ID=gene1547;Name=YP_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07770;old_locus_tag=YP1488%2CYP_1488 NC_005810.1 Protein Homology CDS 1647777 1648616 . + 0 ID=cds1505;Parent=gene1547;Dbxref=Genbank:WP_002211061.1;Name=WP_002211061.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_002211061.1;transl_table=11 NC_005810.1 RefSeq gene 1648838 1649116 . - . ID=gene1548;Name=YP_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07775;old_locus_tag=YP1489%2CYP_1489 NC_005810.1 Protein Homology CDS 1648838 1649116 . - 0 ID=cds1506;Parent=gene1548;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NC_005810.1 RefSeq gene 1649338 1651419 . - . ID=gene1549;Name=YP_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07780;old_locus_tag=YP1490%2CYP_1490 NC_005810.1 Protein Homology CDS 1649338 1651419 . - 0 ID=cds1507;Parent=gene1549;Dbxref=Genbank:WP_002211063.1;Name=WP_002211063.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211063.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1651824 1653781 . + . ID=id304;gbkey=repeat_region NC_005810.1 RefSeq region 1651826 1653778 . - . ID=id305;gbkey=mobile_element NC_005810.1 RefSeq gene 1651891 1652670 . - . ID=gene1550;Name=YP_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07785;old_locus_tag=YP1491%2CYP_1491 NC_005810.1 Protein Homology CDS 1651891 1652670 . - 0 ID=cds1508;Parent=gene1550;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 1652670 1653692 . - . ID=gene1551;Name=YP_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07790;old_locus_tag=YP1492%2CYP_1492 NC_005810.1 Protein Homology CDS 1652670 1653692 . - 0 ID=cds1509;Parent=gene1551;Dbxref=Genbank:WP_011171825.1;Name=WP_011171825.1;gbkey=CDS;product=transposase;protein_id=WP_011171825.1;transl_table=11 NC_005810.1 RefSeq gene 1653749 1653976 . + . ID=gene1552;Name=YP_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07795;old_locus_tag=YP1493%2CYP_1493 NC_005810.1 Protein Homology CDS 1653749 1653976 . + 0 ID=cds1510;Parent=gene1552;Dbxref=Genbank:WP_002215429.1;Name=WP_002215429.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215429.1;transl_table=11 NC_005810.1 RefSeq gene 1653960 1654082 . - . ID=gene1553;Name=YP_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07800 NC_005810.1 Protein Homology CDS 1653960 1654082 . - 0 ID=cds1511;Parent=gene1553;Dbxref=Genbank:WP_002213181.1;Name=WP_002213181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213181.1;transl_table=11 NC_005810.1 RefSeq gene 1654170 1654355 . + . ID=gene1554;Name=YP_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07805;old_locus_tag=YP1494%2CYP_1494 NC_005810.1 Protein Homology CDS 1654170 1654355 . + 0 ID=cds1512;Parent=gene1554;Dbxref=Genbank:WP_002215428.1;Name=WP_002215428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215428.1;transl_table=11 NC_005810.1 RefSeq gene 1654371 1654595 . + . ID=gene1555;Name=YP_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07810;old_locus_tag=YP1495%2CYP_1495 NC_005810.1 Protein Homology CDS 1654371 1654595 . + 0 ID=cds1513;Parent=gene1555;Dbxref=Genbank:WP_002213183.1;Name=WP_002213183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213183.1;transl_table=11 NC_005810.1 RefSeq gene 1654605 1654757 . - . ID=gene1556;Name=YP_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07815 NC_005810.1 Protein Homology CDS 1654605 1654757 . - 0 ID=cds1514;Parent=gene1556;Dbxref=Genbank:WP_002231175.1;Name=WP_002231175.1;gbkey=CDS;product=sugar ABC transporter ATPase;protein_id=WP_002231175.1;transl_table=11 NC_005810.1 RefSeq gene 1654832 1655722 . - . ID=gene1557;Name=YP_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07820;old_locus_tag=YP1497%2CYP_1497 NC_005810.1 Protein Homology CDS 1654832 1655722 . - 0 ID=cds1515;Parent=gene1557;Dbxref=Genbank:WP_002215425.1;Name=WP_002215425.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002215425.1;transl_table=11 NC_005810.1 RefSeq gene 1655747 1656574 . - . ID=gene1558;Name=YP_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07825;old_locus_tag=YP1498%2CYP_1498 NC_005810.1 Protein Homology CDS 1655747 1656574 . - 0 ID=cds1516;Parent=gene1558;Dbxref=Genbank:WP_002213186.1;Name=WP_002213186.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213186.1;transl_table=11 NC_005810.1 RefSeq gene 1656567 1657427 . - . ID=gene1559;Name=YP_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07830;old_locus_tag=YP1499%2CYP_1499 NC_005810.1 Protein Homology CDS 1656567 1657427 . - 0 ID=cds1517;Parent=gene1559;Dbxref=Genbank:WP_002213188.1;Name=WP_002213188.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NC_005810.1 RefSeq gene 1657494 1658762 . - . ID=gene1560;Name=YP_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07835;old_locus_tag=YP1500%2CYP_1500 NC_005810.1 Protein Homology CDS 1657494 1658762 . - 0 ID=cds1518;Parent=gene1560;Dbxref=Genbank:WP_002213190.1;Name=WP_002213190.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002213190.1;transl_table=11 NC_005810.1 RefSeq gene 1658792 1659805 . - . ID=gene1561;Name=YP_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07840;old_locus_tag=YP1501%2CYP_1501 NC_005810.1 Protein Homology CDS 1658792 1659805 . - 0 ID=cds1519;Parent=gene1561;Dbxref=Genbank:WP_002213192.1;Name=WP_002213192.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213192.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1660212 1660229 . + . ID=id306;gbkey=repeat_region NC_005810.1 RefSeq gene 1660213 1660503 . + . ID=gene1562;Name=YP_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07845;old_locus_tag=YP1503%2CYP_1503 NC_005810.1 Protein Homology CDS 1660213 1660503 . + 0 ID=cds1520;Parent=gene1562;Dbxref=Genbank:WP_002215421.1;Name=WP_002215421.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215421.1;transl_table=11 NC_005810.1 RefSeq gene 1660473 1661270 . - . ID=gene1563;Name=YP_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07850;old_locus_tag=YP1504%2CYP_1504 NC_005810.1 Protein Homology CDS 1660473 1661270 . - 0 ID=cds1521;Parent=gene1563;Dbxref=Genbank:WP_002213201.1;Name=WP_002213201.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NC_005810.1 RefSeq gene 1661457 1661561 . - . ID=gene1564;Name=YP_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07855 NC_005810.1 Protein Homology CDS 1661457 1661561 . - 0 ID=cds1522;Parent=gene1564;Dbxref=Genbank:WP_002215419.1;Name=WP_002215419.1;gbkey=CDS;product=transposase;protein_id=WP_002215419.1;transl_table=11 NC_005810.1 RefSeq gene 1662239 1662673 . + . ID=gene1565;Name=YP_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07860;old_locus_tag=YP1505%2CYP_1505 NC_005810.1 Protein Homology CDS 1662239 1662673 . + 0 ID=cds1523;Parent=gene1565;Dbxref=Genbank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NC_005810.1 RefSeq gene 1662685 1663254 . + . ID=gene1566;Name=YP_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07865;old_locus_tag=YP1506%2CYP_1506 NC_005810.1 Protein Homology CDS 1662685 1663254 . + 0 ID=cds1524;Parent=gene1566;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NC_005810.1 RefSeq region 1663641 1664941 . - . ID=id307;gbkey=mobile_element NC_005810.1 RefSeq gene 1663672 1664870 . - . ID=gene1567;Name=YP_RS07870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS07870;old_locus_tag=YP1507;pseudo=true NC_005810.1 Protein Homology CDS 1663672 1664870 . - 0 ID=cds1525;Parent=gene1567;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1664918 1665994 . - . ID=gene1568;Name=YP_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07875;old_locus_tag=YP1508 NC_005810.1 Protein Homology CDS 1664918 1665994 . - 0 ID=cds1526;Parent=gene1568;Dbxref=Genbank:WP_002213208.1;Name=WP_002213208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213208.1;transl_table=11 NC_005810.1 RefSeq gene 1666060 1666350 . - . ID=gene1569;Name=YP_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07880;old_locus_tag=YP1509%2CYP_1509 NC_005810.1 Protein Homology CDS 1666060 1666350 . - 0 ID=cds1527;Parent=gene1569;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11 NC_005810.1 RefSeq gene 1666331 1666603 . - . ID=gene1570;Name=YP_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07885;old_locus_tag=YP1510%2CYP_1510 NC_005810.1 Protein Homology CDS 1666331 1666603 . - 0 ID=cds1528;Parent=gene1570;Dbxref=Genbank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;product=toxin;protein_id=WP_002213210.1;transl_table=11 NC_005810.1 RefSeq gene 1666739 1666993 . + . ID=gene1571;Name=YP_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07890;old_locus_tag=YP1511 NC_005810.1 Protein Homology CDS 1666739 1666993 . + 0 ID=cds1529;Parent=gene1571;Dbxref=Genbank:WP_002213211.1;Name=WP_002213211.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_002213211.1;transl_table=11 NC_005810.1 RefSeq gene 1666990 1667289 . + . ID=gene1572;Name=YP_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07895;old_locus_tag=YP1512%2CYP_1512 NC_005810.1 Protein Homology CDS 1666990 1667289 . + 0 ID=cds1530;Parent=gene1572;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11 NC_005810.1 RefSeq gene 1667306 1667593 . + . ID=gene1573;Name=YP_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07900;old_locus_tag=YP1513%2CYP_1513 NC_005810.1 Protein Homology CDS 1667306 1667593 . + 0 ID=cds1531;Parent=gene1573;Dbxref=Genbank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215413.1;transl_table=11 NC_005810.1 RefSeq gene 1668028 1668243 . + . ID=gene1574;Name=YP_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07905;old_locus_tag=YP1514%2CYP_1514 NC_005810.1 Protein Homology CDS 1668028 1668243 . + 0 ID=cds1532;Parent=gene1574;Dbxref=Genbank:WP_002215412.1;Name=WP_002215412.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215412.1;transl_table=11 NC_005810.1 RefSeq gene 1668240 1668545 . + . ID=gene1575;Name=YP_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07910;old_locus_tag=YP1515%2CYP_1515 NC_005810.1 Protein Homology CDS 1668240 1668545 . + 0 ID=cds1533;Parent=gene1575;Dbxref=Genbank:WP_002215411.1;Name=WP_002215411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215411.1;transl_table=11 NC_005810.1 RefSeq gene 1668526 1668804 . + . ID=gene1576;Name=YP_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07915;old_locus_tag=YP1516%2CYP_1516 NC_005810.1 Protein Homology CDS 1668526 1668804 . + 0 ID=cds1534;Parent=gene1576;Dbxref=Genbank:WP_002215410.1;Name=WP_002215410.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215410.1;transl_table=11 NC_005810.1 RefSeq gene 1668969 1669109 . + . ID=gene1577;Name=YP_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07920;old_locus_tag=YP1517 NC_005810.1 Protein Homology CDS 1668969 1669109 . + 0 ID=cds1535;Parent=gene1577;Dbxref=Genbank:WP_002213214.1;Name=WP_002213214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213214.1;transl_table=11 NC_005810.1 RefSeq gene 1669157 1669639 . + . ID=gene1578;Name=YP_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07925;old_locus_tag=YP1518%2CYP_1518 NC_005810.1 Protein Homology CDS 1669157 1669639 . + 0 ID=cds1536;Parent=gene1578;Dbxref=Genbank:WP_032465626.1;Name=WP_032465626.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_032465626.1;transl_table=11 NC_005810.1 RefSeq gene 1669711 1670670 . + . ID=gene1579;Name=YP_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07930;old_locus_tag=YP1519%2CYP_1519 NC_005810.1 Protein Homology CDS 1669711 1670670 . + 0 ID=cds1537;Parent=gene1579;Dbxref=Genbank:WP_002213218.1;Name=WP_002213218.1;gbkey=CDS;product=transposase;protein_id=WP_002213218.1;transl_table=11 NC_005810.1 RefSeq gene 1670890 1671234 . + . ID=gene1580;Name=YP_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07935;old_locus_tag=YP1520%2CYP_1520 NC_005810.1 Protein Homology CDS 1670890 1671234 . + 0 ID=cds1538;Parent=gene1580;Dbxref=Genbank:WP_002215406.1;Name=WP_002215406.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215406.1;transl_table=11 NC_005810.1 RefSeq gene 1671260 1671484 . + . ID=gene1581;Name=YP_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07940;old_locus_tag=YP1521%2CYP_1521 NC_005810.1 Protein Homology CDS 1671260 1671484 . + 0 ID=cds1539;Parent=gene1581;Dbxref=Genbank:WP_011171826.1;Name=WP_011171826.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171826.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1671326 1671415 . + . ID=id308;gbkey=repeat_region NC_005810.1 RefSeq gene 1671514 1671696 . - . ID=gene1582;Name=YP_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07945 NC_005810.1 Protein Homology CDS 1671514 1671696 . - 0 ID=cds1540;Parent=gene1582;Dbxref=Genbank:WP_002213223.1;Name=WP_002213223.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213223.1;transl_table=11 NC_005810.1 RefSeq gene 1672307 1672429 . - . ID=gene1583;Name=YP_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07950;old_locus_tag=YP1523%2CYP_1523 NC_005810.1 Protein Homology CDS 1672307 1672429 . - 0 ID=cds1541;Parent=gene1583;Dbxref=Genbank:WP_002213228.1;Name=WP_002213228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213228.1;transl_table=11 NC_005810.1 RefSeq gene 1672822 1673049 . - . ID=gene1584;Name=YP_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07955;old_locus_tag=YP1524 NC_005810.1 Protein Homology CDS 1672822 1673049 . - 0 ID=cds1542;Parent=gene1584;Dbxref=Genbank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002215401.1;transl_table=11 NC_005810.1 RefSeq gene 1673160 1673675 . + . ID=gene1585;Name=YP_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07960;old_locus_tag=YP1525%2CYP_1525 NC_005810.1 Protein Homology CDS 1673160 1673675 . + 0 ID=cds1543;Parent=gene1585;Dbxref=Genbank:WP_002215399.1;Name=WP_002215399.1;gbkey=CDS;product=integrase;protein_id=WP_002215399.1;transl_table=11 NC_005810.1 RefSeq gene 1673973 1674058 . - . ID=gene1586;Name=YP_RS07965;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS07965;old_locus_tag=tRNA-Leu_4%2CYP_t31 NC_005810.1 tRNAscan-SE tRNA 1673973 1674058 . - . ID=rna38;Parent=gene1586;anticodon=(pos:complement(1674022..1674024));gbkey=tRNA;product=tRNA-Leu NC_005810.1 tRNAscan-SE exon 1673973 1674058 . - . ID=id309;Parent=rna38;anticodon=(pos:complement(1674022..1674024));gbkey=tRNA;product=tRNA-Leu NC_005810.1 RefSeq gene 1674069 1674142 . - . ID=gene1587;Name=YP_RS07970;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS07970;old_locus_tag=tRNA-Cys_1%2CYP_t32 NC_005810.1 tRNAscan-SE tRNA 1674069 1674142 . - . ID=rna39;Parent=gene1587;anticodon=(pos:complement(1674108..1674110));gbkey=tRNA;product=tRNA-Cys NC_005810.1 tRNAscan-SE exon 1674069 1674142 . - . ID=id310;Parent=rna39;anticodon=(pos:complement(1674108..1674110));gbkey=tRNA;product=tRNA-Cys NC_005810.1 RefSeq gene 1674195 1674270 . - . ID=gene1588;Name=YP_RS07975;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS07975;old_locus_tag=tRNA-Gly_2%2CYP_t33 NC_005810.1 tRNAscan-SE tRNA 1674195 1674270 . - . ID=rna40;Parent=gene1588;anticodon=(pos:complement(1674235..1674237));gbkey=tRNA;product=tRNA-Gly NC_005810.1 tRNAscan-SE exon 1674195 1674270 . - . ID=id311;Parent=rna40;anticodon=(pos:complement(1674235..1674237));gbkey=tRNA;product=tRNA-Gly NC_005810.1 RefSeq gene 1674415 1674963 . - . ID=gene1589;Name=YP_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07980;old_locus_tag=YP1526%2CYP_1526 NC_005810.1 Protein Homology CDS 1674415 1674963 . - 0 ID=cds1544;Parent=gene1589;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NC_005810.1 RefSeq gene 1675022 1676854 . - . ID=gene1590;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YP_RS07985;old_locus_tag=YP1527%2CYP_1527 NC_005810.1 Protein Homology CDS 1675022 1676854 . - 0 ID=cds1545;Parent=gene1590;Dbxref=Genbank:WP_002220477.1;Name=WP_002220477.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_002220477.1;transl_table=11 NC_005810.1 RefSeq gene 1676847 1677503 . - . ID=gene1591;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=YP_RS07990;old_locus_tag=YP1528%2CYP_1528 NC_005810.1 Protein Homology CDS 1676847 1677503 . - 0 ID=cds1546;Parent=gene1591;Dbxref=Genbank:WP_002211176.1;Name=WP_002211176.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_002211176.1;transl_table=11 NC_005810.1 RefSeq gene 1678166 1678390 . + . ID=gene1592;Name=YP_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS07995;old_locus_tag=YP1529%2CYP_1529 NC_005810.1 Protein Homology CDS 1678166 1678390 . + 0 ID=cds1547;Parent=gene1592;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11 NC_005810.1 RefSeq gene 1678518 1678859 . + . ID=gene1593;Name=YP_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08000;old_locus_tag=YP1530%2CYP_1530 NC_005810.1 Protein Homology CDS 1678518 1678859 . + 0 ID=cds1548;Parent=gene1593;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11 NC_005810.1 RefSeq gene 1678887 1679141 . - . ID=gene1594;Name=YP_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08005;old_locus_tag=YP1531%2CYP_1531 NC_005810.1 Protein Homology CDS 1678887 1679141 . - 0 ID=cds1549;Parent=gene1594;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11 NC_005810.1 RefSeq gene 1679481 1680032 . - . ID=gene1595;Name=YP_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08010;old_locus_tag=YP1533%2CYP_1533 NC_005810.1 Protein Homology CDS 1679481 1680032 . - 0 ID=cds1550;Parent=gene1595;Dbxref=Genbank:WP_002211172.1;Name=WP_002211172.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002211172.1;transl_table=11 NC_005810.1 RefSeq gene 1680719 1680794 . - . ID=gene1596;Name=YP_RS08015;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS08015;old_locus_tag=tRNA-Lys_4%2CYP_t34 NC_005810.1 tRNAscan-SE tRNA 1680719 1680794 . - . ID=rna41;Parent=gene1596;anticodon=(pos:complement(1680759..1680761));gbkey=tRNA;product=tRNA-Lys NC_005810.1 tRNAscan-SE exon 1680719 1680794 . - . ID=id312;Parent=rna41;anticodon=(pos:complement(1680759..1680761));gbkey=tRNA;product=tRNA-Lys NC_005810.1 RefSeq gene 1681147 1682571 . + . ID=gene1597;Name=YP_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08020;old_locus_tag=YP1534%2CYP_1534 NC_005810.1 Protein Homology CDS 1681147 1682571 . + 0 ID=cds1551;Parent=gene1597;Dbxref=Genbank:WP_002220481.1;Name=WP_002220481.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220481.1;transl_table=11 NC_005810.1 RefSeq gene 1682697 1683875 . - . ID=gene1598;Name=YP_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08025;old_locus_tag=YP1535%2CYP_1535 NC_005810.1 Protein Homology CDS 1682697 1683875 . - 0 ID=cds1552;Parent=gene1598;Dbxref=Genbank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11 NC_005810.1 RefSeq gene 1684269 1684868 . + . ID=gene1599;Name=YP_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08030;old_locus_tag=YP1536%2CYP_1536 NC_005810.1 Protein Homology CDS 1684269 1684868 . + 0 ID=cds1553;Parent=gene1599;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11 NC_005810.1 RefSeq gene 1684954 1686258 . - . ID=gene1600;Name=YP_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08035;old_locus_tag=YP1537%2CYP_1537 NC_005810.1 Protein Homology CDS 1684954 1686258 . - 0 ID=cds1554;Parent=gene1600;Dbxref=Genbank:WP_002211167.1;Name=WP_002211167.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_002211167.1;transl_table=11 NC_005810.1 RefSeq gene 1686269 1687399 . - . ID=gene1601;Name=YP_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08040;old_locus_tag=YP1538%2CYP_1538 NC_005810.1 Protein Homology CDS 1686269 1687399 . - 0 ID=cds1555;Parent=gene1601;Dbxref=Genbank:WP_002211166.1;Name=WP_002211166.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron uptake system component EfeO;protein_id=WP_002211166.1;transl_table=11 NC_005810.1 RefSeq gene 1687429 1688277 . - . ID=gene1602;Name=YP_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08045;old_locus_tag=YP1539%2CYP_1539 NC_005810.1 Protein Homology CDS 1687429 1688277 . - 0 ID=cds1556;Parent=gene1602;Dbxref=Genbank:WP_002211165.1;Name=WP_002211165.1;gbkey=CDS;product=ferrous iron permease EfeU;protein_id=WP_002211165.1;transl_table=11 NC_005810.1 RefSeq gene 1688610 1690094 . - . ID=gene1603;Name=YP_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08050;old_locus_tag=YP1540%2CYP_1540 NC_005810.1 Protein Homology CDS 1688610 1690094 . - 0 ID=cds1557;Parent=gene1603;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1690123 1690160 . + . ID=id313;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1690124 1690321 . - . ID=gene1604;Name=YP_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08055;old_locus_tag=YP1541%2CYP_1541 NC_005810.1 Protein Homology CDS 1690124 1690321 . - 0 ID=cds1558;Parent=gene1604;Dbxref=Genbank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211163.1;transl_table=11 NC_005810.1 RefSeq gene 1690666 1694637 . + . ID=gene1605;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YP_RS08060;old_locus_tag=YP1542%2CYP_1542 NC_005810.1 Protein Homology CDS 1690666 1694637 . + 0 ID=cds1559;Parent=gene1605;Dbxref=Genbank:WP_002224448.1;Name=WP_002224448.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=WP_002224448.1;transl_table=11 NC_005810.1 RefSeq gene 1695143 1695436 . + . ID=gene1606;Name=YP_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08065;old_locus_tag=YP1543%2CYP_1543 NC_005810.1 Protein Homology CDS 1695143 1695436 . + 0 ID=cds1560;Parent=gene1606;Dbxref=Genbank:WP_002211161.1;Name=WP_002211161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211161.1;transl_table=11 NC_005810.1 RefSeq gene 1695436 1695807 . + . ID=gene1607;Name=YP_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08070;old_locus_tag=YP1544%2CYP_1544 NC_005810.1 Protein Homology CDS 1695436 1695807 . + 0 ID=cds1561;Parent=gene1607;Dbxref=Genbank:WP_002223875.1;Name=WP_002223875.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002223875.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1695943 1696111 . + . ID=id314;gbkey=repeat_region NC_005810.1 RefSeq gene 1696099 1696860 . - . ID=gene1608;Name=YP_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08075;old_locus_tag=YP1545%2CYP_1545 NC_005810.1 Protein Homology CDS 1696099 1696860 . - 0 ID=cds1562;Parent=gene1608;Dbxref=Genbank:WP_002211159.1;Name=WP_002211159.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211159.1;transl_table=11 NC_005810.1 RefSeq gene 1696863 1697525 . - . ID=gene1609;Name=YP_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08080;old_locus_tag=YP1546%2CYP_1546 NC_005810.1 Protein Homology CDS 1696863 1697525 . - 0 ID=cds1563;Parent=gene1609;Dbxref=Genbank:WP_002211158.1;Name=WP_002211158.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002211158.1;transl_table=11 NC_005810.1 RefSeq gene 1697525 1698325 . - . ID=gene1610;Name=YP_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08085;old_locus_tag=YP1547%2CYP_1547 NC_005810.1 Protein Homology CDS 1697525 1698325 . - 0 ID=cds1564;Parent=gene1610;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11 NC_005810.1 RefSeq gene 1698449 1699441 . - . ID=gene1611;Name=YP_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08090;old_locus_tag=YP1548%2CYP_1548 NC_005810.1 Protein Homology CDS 1698449 1699441 . - 0 ID=cds1565;Parent=gene1611;Dbxref=Genbank:WP_002227959.1;Name=WP_002227959.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_002227959.1;transl_table=11 NC_005810.1 RefSeq gene 1699730 1700239 . - . ID=gene1612;Name=YP_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08095;old_locus_tag=YP1549%2CYP_1549 NC_005810.1 Protein Homology CDS 1699730 1700239 . - 0 ID=cds1566;Parent=gene1612;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11 NC_005810.1 RefSeq gene 1700461 1701183 . - . ID=gene1613;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=YP_RS08100;old_locus_tag=YP1550%2CYP_1550 NC_005810.1 Protein Homology CDS 1700461 1701183 . - 0 ID=cds1567;Parent=gene1613;Dbxref=Genbank:WP_002211153.1;Name=WP_002211153.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_002211153.1;transl_table=11 NC_005810.1 RefSeq gene 1701530 1702639 . - . ID=gene1614;Name=YP_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08105;old_locus_tag=YP1551%2CYP_1551 NC_005810.1 Protein Homology CDS 1701530 1702639 . - 0 ID=cds1568;Parent=gene1614;Dbxref=Genbank:WP_002231111.1;Name=WP_002231111.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002231111.1;transl_table=11 NC_005810.1 RefSeq gene 1702936 1704336 . + . ID=gene1615;Name=YP_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08110;old_locus_tag=YP1552%2CYP_1552 NC_005810.1 Protein Homology CDS 1702936 1704336 . + 0 ID=cds1569;Parent=gene1615;Dbxref=Genbank:WP_002211150.1;Name=WP_002211150.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_002211150.1;transl_table=11 NC_005810.1 RefSeq gene 1704347 1704745 . + . ID=gene1616;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YP_RS08115;old_locus_tag=YP1553%2CYP_1553 NC_005810.1 Protein Homology CDS 1704347 1704745 . + 0 ID=cds1570;Parent=gene1616;Dbxref=Genbank:WP_002211149.1;Name=WP_002211149.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_002211149.1;transl_table=11 NC_005810.1 RefSeq gene 1704756 1705118 . + . ID=gene1617;Name=YP_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08120;old_locus_tag=YP1554%2CYP_1554 NC_005810.1 Protein Homology CDS 1704756 1705118 . + 0 ID=cds1571;Parent=gene1617;Dbxref=Genbank:WP_002211148.1;Name=WP_002211148.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_002211148.1;transl_table=11 NC_005810.1 RefSeq gene 1705173 1705433 . + . ID=gene1618;Name=YP_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08125;old_locus_tag=YP1555%2CYP_1555 NC_005810.1 Protein Homology CDS 1705173 1705433 . + 0 ID=cds1572;Parent=gene1618;Dbxref=Genbank:WP_011171828.1;Name=WP_011171828.1;gbkey=CDS;product=membrane protein;protein_id=WP_011171828.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1705308 1705349 . + . ID=id315;Note=exact repeat region containing 2 copies of a 21 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1705440 1706315 . + . ID=gene1619;Name=YP_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08130;old_locus_tag=YP1556%2CYP_1556 NC_005810.1 Protein Homology CDS 1705440 1706315 . + 0 ID=cds1573;Parent=gene1619;Dbxref=Genbank:WP_002211147.1;Name=WP_002211147.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NC_005810.1 RefSeq gene 1706669 1708582 . + . ID=gene1620;Name=YP_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08135 NC_005810.1 Protein Homology CDS 1706669 1708582 . + 0 ID=cds1574;Parent=gene1620;Dbxref=Genbank:WP_002229284.1;Name=WP_002229284.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002229284.1;transl_table=11 NC_005810.1 RefSeq gene 1708719 1709624 . + . ID=gene1621;Name=YP_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08140 NC_005810.1 Protein Homology CDS 1708719 1709624 . + 0 ID=cds1575;Parent=gene1621;Dbxref=Genbank:WP_002228542.1;Name=WP_002228542.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002228542.1;transl_table=11 NC_005810.1 RefSeq gene 1709785 1710396 . + . ID=gene1622;Name=YP_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08145;old_locus_tag=YP1558%2CYP_1558 NC_005810.1 Protein Homology CDS 1709785 1710396 . + 0 ID=cds1576;Parent=gene1622;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11 NC_005810.1 RefSeq gene 1710582 1711058 . - . ID=gene1623;Name=YP_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08150;old_locus_tag=YP1559%2CYP_1559 NC_005810.1 Protein Homology CDS 1710582 1711058 . - 0 ID=cds1577;Parent=gene1623;Dbxref=Genbank:WP_002215992.1;Name=WP_002215992.1;gbkey=CDS;product=death-on-curing family protein;protein_id=WP_002215992.1;transl_table=11 NC_005810.1 RefSeq gene 1711069 1711248 . - . ID=gene1624;Name=YP_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08155 NC_005810.1 Protein Homology CDS 1711069 1711248 . - 0 ID=cds1578;Parent=gene1624;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NC_005810.1 RefSeq gene 1711668 1711979 . - . ID=gene1625;Name=YP_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08160;old_locus_tag=YP1561%2CYP_1561 NC_005810.1 Protein Homology CDS 1711668 1711979 . - 0 ID=cds1579;Parent=gene1625;Dbxref=Genbank:WP_002211144.1;Name=WP_002211144.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NC_005810.1 RefSeq gene 1712332 1714044 . + . ID=gene1626;Name=YP_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08165;old_locus_tag=YP1562%2CYP_1562 NC_005810.1 Protein Homology CDS 1712332 1714044 . + 0 ID=cds1580;Parent=gene1626;Dbxref=Genbank:WP_002211143.1;Name=WP_002211143.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_002211143.1;transl_table=11 NC_005810.1 RefSeq gene 1714041 1715033 . + . ID=gene1627;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YP_RS08170;old_locus_tag=YP1563%2CYP_1563 NC_005810.1 Protein Homology CDS 1714041 1715033 . + 0 ID=cds1581;Parent=gene1627;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NC_005810.1 RefSeq gene 1715026 1715742 . + . ID=gene1628;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YP_RS08175;old_locus_tag=YP1564%2CYP_1564 NC_005810.1 Protein Homology CDS 1715026 1715742 . + 0 ID=cds1582;Parent=gene1628;Dbxref=Genbank:WP_002211141.1;Name=WP_002211141.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_002211141.1;transl_table=11 NC_005810.1 RefSeq gene 1715705 1717159 . + . ID=gene1629;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YP_RS08180;old_locus_tag=YP1565%2CYP_1565 NC_005810.1 Protein Homology CDS 1715705 1717159 . + 0 ID=cds1583;Parent=gene1629;Dbxref=Genbank:WP_002211140.1;Name=WP_002211140.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=WP_002211140.1;transl_table=11 NC_005810.1 RefSeq gene 1717259 1717705 . + . ID=gene1630;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YP_RS08185;old_locus_tag=YP1566%2CYP_1566 NC_005810.1 Protein Homology CDS 1717259 1717705 . + 0 ID=cds1584;Parent=gene1630;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11 NC_005810.1 RefSeq gene 1717702 1719054 . + . ID=gene1631;Name=YP_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08190;old_locus_tag=YP1567%2CYP_1567 NC_005810.1 Protein Homology CDS 1717702 1719054 . + 0 ID=cds1585;Parent=gene1631;Dbxref=Genbank:WP_002211138.1;Name=WP_002211138.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_002211138.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1718253 1718288 . + . ID=id316;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1719321 1719791 . + . ID=gene1632;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YP_RS08195;old_locus_tag=YP1568%2CYP_1568 NC_005810.1 Protein Homology CDS 1719321 1719791 . + 0 ID=cds1586;Parent=gene1632;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11 NC_005810.1 RefSeq gene 1719797 1720798 . + . ID=gene1633;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YP_RS08200;old_locus_tag=YP1569%2CYP_1569 NC_005810.1 Protein Homology CDS 1719797 1720798 . + 0 ID=cds1587;Parent=gene1633;Dbxref=Genbank:WP_002211135.1;Name=WP_002211135.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11 NC_005810.1 RefSeq gene 1720795 1721211 . + . ID=gene1634;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YP_RS08205;old_locus_tag=YP1570%2CYP_1570 NC_005810.1 Protein Homology CDS 1720795 1721211 . + 0 ID=cds1588;Parent=gene1634;Dbxref=Genbank:WP_002211134.1;Name=WP_002211134.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_002211134.1;transl_table=11 NC_005810.1 RefSeq gene 1721211 1721747 . + . ID=gene1635;Name=YP_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08210;old_locus_tag=YP1571%2CYP_1571 NC_005810.1 Protein Homology CDS 1721211 1721747 . + 0 ID=cds1589;Parent=gene1635;Dbxref=Genbank:WP_002231108.1;Name=WP_002231108.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_002231108.1;transl_table=11 NC_005810.1 RefSeq gene 1721828 1722568 . + . ID=gene1636;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YP_RS08215;old_locus_tag=YP1572%2CYP_1572 NC_005810.1 Protein Homology CDS 1721828 1722568 . + 0 ID=cds1590;Parent=gene1636;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11 NC_005810.1 RefSeq gene 1722674 1722943 . + . ID=gene1637;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YP_RS08220;old_locus_tag=YP1573%2CYP_1573 NC_005810.1 Protein Homology CDS 1722674 1722943 . + 0 ID=cds1591;Parent=gene1637;Dbxref=Genbank:WP_002211131.1;Name=WP_002211131.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NC_005810.1 RefSeq gene 1722946 1723728 . + . ID=gene1638;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YP_RS08225;old_locus_tag=YP1574%2CYP_1574 NC_005810.1 Protein Homology CDS 1722946 1723728 . + 0 ID=cds1592;Parent=gene1638;Dbxref=Genbank:WP_002211130.1;Name=WP_002211130.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_002211130.1;transl_table=11 NC_005810.1 RefSeq gene 1723935 1724117 . + . ID=gene1639;Name=YP_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08230 NC_005810.1 Protein Homology CDS 1723935 1724117 . + 0 ID=cds1593;Parent=gene1639;Dbxref=Genbank:WP_002214976.1;Name=WP_002214976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214976.1;transl_table=11 NC_005810.1 RefSeq gene 1724162 1724581 . + . ID=gene1640;Name=YP_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08235;old_locus_tag=YP1576%2CYP_1576 NC_005810.1 Protein Homology CDS 1724162 1724581 . + 0 ID=cds1594;Parent=gene1640;Dbxref=Genbank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211129.1;transl_table=11 NC_005810.1 RefSeq gene 1724839 1725798 . - . ID=gene1641;Name=YP_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08240;old_locus_tag=YP1577%2CYP_1577 NC_005810.1 Protein Homology CDS 1724839 1725798 . - 0 ID=cds1595;Parent=gene1641;Dbxref=Genbank:WP_002211128.1;Name=WP_002211128.1;gbkey=CDS;product=kinase pfkB family;protein_id=WP_002211128.1;transl_table=11 NC_005810.1 RefSeq gene 1725847 1726869 . - . ID=gene1642;Name=YP_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08245;old_locus_tag=YP1578%2CYP_1578 NC_005810.1 Protein Homology CDS 1725847 1726869 . - 0 ID=cds1596;Parent=gene1642;Dbxref=Genbank:WP_002214974.1;Name=WP_002214974.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002214974.1;transl_table=11 NC_005810.1 RefSeq gene 1726872 1728449 . - . ID=gene1643;Name=YP_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08250;old_locus_tag=YP1579%2CYP_1579 NC_005810.1 Protein Homology CDS 1726872 1728449 . - 0 ID=cds1597;Parent=gene1643;Dbxref=Genbank:WP_002211126.1;Name=WP_002211126.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002211126.1;transl_table=11 NC_005810.1 RefSeq gene 1728515 1729510 . - . ID=gene1644;Name=YP_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08255;old_locus_tag=YP1580%2CYP_1580 NC_005810.1 Protein Homology CDS 1728515 1729510 . - 0 ID=cds1598;Parent=gene1644;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11 NC_005810.1 RefSeq gene 1729553 1730611 . - . ID=gene1645;Name=YP_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08260;old_locus_tag=YP1581%2CYP_1581 NC_005810.1 Protein Homology CDS 1729553 1730611 . - 0 ID=cds1599;Parent=gene1645;Dbxref=Genbank:WP_002220497.1;Name=WP_002220497.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220497.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1730633 1730668 . + . ID=id317;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1730741 1732807 . - . ID=gene1646;Name=YP_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08265;old_locus_tag=YP1582%2CYP_1582 NC_005810.1 Protein Homology CDS 1730741 1732807 . - 0 ID=cds1600;Parent=gene1646;Dbxref=Genbank:WP_002211122.1;Name=WP_002211122.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002211122.1;transl_table=11 NC_005810.1 RefSeq gene 1733025 1734026 . + . ID=gene1647;Name=YP_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08270;old_locus_tag=YP1583%2CYP_1583 NC_005810.1 Protein Homology CDS 1733025 1734026 . + 0 ID=cds1601;Parent=gene1647;Dbxref=Genbank:WP_002211121.1;Name=WP_002211121.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NC_005810.1 RefSeq gene 1734055 1735035 . - . ID=gene1648;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YP_RS08275;old_locus_tag=YP1584%2CYP_1584 NC_005810.1 Protein Homology CDS 1734055 1735035 . - 0 ID=cds1602;Parent=gene1648;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NC_005810.1 RefSeq gene 1735174 1736838 . - . ID=gene1649;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YP_RS08280;old_locus_tag=YP1585%2CYP_1585 NC_005810.1 Protein Homology CDS 1735174 1736838 . - 0 ID=cds1603;Parent=gene1649;Dbxref=Genbank:WP_002211119.1;Name=WP_002211119.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211119.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1737006 1737414 . + . ID=id318;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1737006 1737291 . + . ID=id319;Note=degenerate repeat region containing 2 copies of a 143bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1737423 1738367 . - . ID=gene1650;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YP_RS08285;old_locus_tag=YP1586%2CYP_1586 NC_005810.1 Protein Homology CDS 1737423 1738367 . - 0 ID=cds1604;Parent=gene1650;Dbxref=Genbank:WP_002211118.1;Name=WP_002211118.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_002211118.1;transl_table=11 NC_005810.1 RefSeq gene 1738367 1739476 . - . ID=gene1651;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=YP_RS08290;old_locus_tag=YP1587%2CYP_1587 NC_005810.1 Protein Homology CDS 1738367 1739476 . - 0 ID=cds1605;Parent=gene1651;Dbxref=Genbank:WP_002211117.1;Name=WP_002211117.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=WP_002211117.1;transl_table=11 NC_005810.1 RefSeq gene 1739491 1740222 . - . ID=gene1652;Name=YP_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08295;old_locus_tag=YP1588%2CYP_1588 NC_005810.1 Protein Homology CDS 1739491 1740222 . - 0 ID=cds1606;Parent=gene1652;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11 NC_005810.1 RefSeq gene 1740324 1741049 . - . ID=gene1653;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=YP_RS08300;old_locus_tag=YP1589%2CYP_1589;pseudo=true NC_005810.1 Protein Homology CDS 1740324 1741049 . - 0 ID=cds1607;Parent=gene1653;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar biosynthesis protein FlgG;pseudo=true;transl_except=(pos:complement(1741035..1741037)%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 1741003 1741632 . - . ID=gene1654;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=YP_RS08305;old_locus_tag=YP1590%2CYP_1590 NC_005810.1 Protein Homology CDS 1741003 1741632 . - 0 ID=cds1608;Parent=gene1654;Dbxref=Genbank:WP_002211114.1;Name=WP_002211114.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_002211114.1;transl_table=11 NC_005810.1 RefSeq gene 1741654 1742940 . - . ID=gene1655;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YP_RS08310;old_locus_tag=YP1591%2CYP_1591 NC_005810.1 Protein Homology CDS 1741654 1742940 . - 0 ID=cds1609;Parent=gene1655;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1743093 1743130 . + . ID=id320;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1743142 1743819 . - . ID=gene1656;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YP_RS08315;old_locus_tag=YP1592%2CYP_1592 NC_005810.1 Protein Homology CDS 1743142 1743819 . - 0 ID=cds1610;Parent=gene1656;Dbxref=Genbank:WP_002211112.1;Name=WP_002211112.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_002211112.1;transl_table=11 NC_005810.1 RefSeq gene 1743834 1744238 . - . ID=gene1657;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YP_RS08320;old_locus_tag=YP1593%2CYP_1593 NC_005810.1 Protein Homology CDS 1743834 1744238 . - 0 ID=cds1611;Parent=gene1657;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NC_005810.1 RefSeq gene 1744244 1744657 . - . ID=gene1658;Name=YP_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08325;old_locus_tag=YP1594%2CYP_1594 NC_005810.1 Protein Homology CDS 1744244 1744657 . - 0 ID=cds1612;Parent=gene1658;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11 NC_005810.1 RefSeq gene 1744896 1745594 . + . ID=gene1659;Name=YP_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08330;old_locus_tag=YP1595%2CYP_1595 NC_005810.1 Protein Homology CDS 1744896 1745594 . + 0 ID=cds1613;Parent=gene1659;Dbxref=Genbank:WP_002227966.1;Name=WP_002227966.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002227966.1;transl_table=11 NC_005810.1 RefSeq gene 1745745 1746047 . + . ID=gene1660;Name=YP_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08335;old_locus_tag=YP1596%2CYP_1596 NC_005810.1 Protein Homology CDS 1745745 1746047 . + 0 ID=cds1614;Parent=gene1660;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11 NC_005810.1 RefSeq gene 1746066 1746506 . + . ID=gene1661;Name=YP_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08340;old_locus_tag=YP1597%2CYP_1597 NC_005810.1 Protein Homology CDS 1746066 1746506 . + 0 ID=cds1615;Parent=gene1661;Dbxref=Genbank:WP_002211107.1;Name=WP_002211107.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagellar synthesis protein FlgN;protein_id=WP_002211107.1;transl_table=11 NC_005810.1 RefSeq gene 1746696 1748768 . - . ID=gene1662;Name=YP_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08345 NC_005810.1 Protein Homology CDS 1746696 1748768 . - 0 ID=cds1616;Parent=gene1662;Dbxref=Genbank:WP_002211106.1;Name=WP_002211106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211106.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1748745 1749466 . + . ID=id321;gbkey=repeat_region NC_005810.1 RefSeq region 1748750 1749461 . - . ID=id322;gbkey=mobile_element NC_005810.1 RefSeq gene 1748858 1749316 . - . ID=gene1663;Name=YP_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08350;old_locus_tag=YP1599%2CYP_1599 NC_005810.1 Protein Homology CDS 1748858 1749316 . - 0 ID=cds1617;Parent=gene1663;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 1749306 1750310 . - . ID=gene1664;Name=YP_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08355 NC_005810.1 Protein Homology CDS 1749306 1750310 . - 0 ID=cds1618;Parent=gene1664;Dbxref=Genbank:WP_011566188.1;Name=WP_011566188.1;gbkey=CDS;product=invasin;protein_id=WP_011566188.1;transl_table=11 NC_005810.1 RefSeq gene 1750974 1751396 . - . ID=gene1665;Name=YP_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08360;old_locus_tag=YP1600%2CYP_1600 NC_005810.1 Protein Homology CDS 1750974 1751396 . - 0 ID=cds1619;Parent=gene1665;Dbxref=Genbank:WP_002211101.1;Name=WP_002211101.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_002211101.1;transl_table=11 NC_005810.1 RefSeq gene 1751396 1753474 . - . ID=gene1666;Name=YP_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08365;old_locus_tag=YP1601%2CYP_1601 NC_005810.1 Protein Homology CDS 1751396 1753474 . - 0 ID=cds1620;Parent=gene1666;Dbxref=Genbank:WP_002211100.1;Name=WP_002211100.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_002211100.1;transl_table=11 NC_005810.1 RefSeq gene 1753474 1754634 . - . ID=gene1667;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YP_RS08370;old_locus_tag=YP1602%2CYP_1602 NC_005810.1 Protein Homology CDS 1753474 1754634 . - 0 ID=cds1621;Parent=gene1667;Dbxref=Genbank:WP_002211099.1;Name=WP_002211099.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1754744 1754789 . + . ID=id323;Note=degenerate repeat region containing 2 copies of a 23bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1755166 1755624 . + . ID=gene1668;Name=YP_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08375;old_locus_tag=YP1603%2CYP_1603 NC_005810.1 Protein Homology CDS 1755166 1755624 . + 0 ID=cds1622;Parent=gene1668;Dbxref=Genbank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211098.1;transl_table=11 NC_005810.1 RefSeq gene 1755618 1755944 . + . ID=gene1669;Name=YP_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08380;old_locus_tag=YP1604%2CYP_1604 NC_005810.1 Protein Homology CDS 1755618 1755944 . + 0 ID=cds1623;Parent=gene1669;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11 NC_005810.1 RefSeq gene 1755957 1756187 . - . ID=gene1670;Name=YP_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08385;old_locus_tag=YP1605%2CYP_1605 NC_005810.1 Protein Homology CDS 1755957 1756187 . - 0 ID=cds1624;Parent=gene1670;Dbxref=Genbank:WP_002218131.1;Name=WP_002218131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218131.1;transl_table=11 NC_005810.1 RefSeq gene 1756467 1756808 . - . ID=gene1671;Name=YP_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08390;old_locus_tag=YP1606%2CYP_1606 NC_005810.1 Protein Homology CDS 1756467 1756808 . - 0 ID=cds1625;Parent=gene1671;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11 NC_005810.1 RefSeq gene 1756905 1757789 . - . ID=gene1672;Name=YP_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08395;old_locus_tag=YP1607%2CYP_1607 NC_005810.1 Protein Homology CDS 1756905 1757789 . - 0 ID=cds1626;Parent=gene1672;Dbxref=Genbank:WP_002211094.1;Name=WP_002211094.1;gbkey=CDS;product=copper resistance protein D;protein_id=WP_002211094.1;transl_table=11 NC_005810.1 RefSeq gene 1757792 1758178 . - . ID=gene1673;Name=YP_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08400;old_locus_tag=YP1608 NC_005810.1 Protein Homology CDS 1757792 1758178 . - 0 ID=cds1627;Parent=gene1673;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11 NC_005810.1 RefSeq gene 1758392 1758577 . + . ID=gene1674;Name=YP_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08405;old_locus_tag=YP1609%2CYP_1609 NC_005810.1 GeneMarkS+ CDS 1758392 1758577 . + 0 ID=cds1628;Parent=gene1674;Dbxref=Genbank:WP_011171831.1;Name=WP_011171831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171831.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1758451 1758522 . + . ID=id324;Note=degenerate repeat region containing 8 copies of a 9bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1758610 1759119 . - . ID=gene1675;Name=YP_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08410;old_locus_tag=YP1610%2CYP_1610 NC_005810.1 Protein Homology CDS 1758610 1759119 . - 0 ID=cds1629;Parent=gene1675;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11 NC_005810.1 RefSeq gene 1759520 1759750 . + . ID=gene1676;Name=YP_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08415;old_locus_tag=YP1611%2CYP_1611 NC_005810.1 Protein Homology CDS 1759520 1759750 . + 0 ID=cds1630;Parent=gene1676;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NC_005810.1 RefSeq gene 1759810 1760760 . - . ID=gene1677;Name=YP_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08420;old_locus_tag=YP1612%2CYP_1612 NC_005810.1 Protein Homology CDS 1759810 1760760 . - 0 ID=cds1631;Parent=gene1677;Dbxref=Genbank:WP_002211090.1;Name=WP_002211090.1;gbkey=CDS;product=proline iminopeptidase;protein_id=WP_002211090.1;transl_table=11 NC_005810.1 RefSeq gene 1761482 1763533 . - . ID=gene1678;Name=YP_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08425;old_locus_tag=YP1613%2CYP_1613 NC_005810.1 Protein Homology CDS 1761482 1763533 . - 0 ID=cds1632;Parent=gene1678;Dbxref=Genbank:WP_002211088.1;Name=WP_002211088.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=oligopeptidase B;protein_id=WP_002211088.1;transl_table=11 NC_005810.1 RefSeq gene 1763843 1764268 . - . ID=gene1679;Name=YP_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08430;old_locus_tag=YP1614%2CYP_1614 NC_005810.1 Protein Homology CDS 1763843 1764268 . - 0 ID=cds1633;Parent=gene1679;Dbxref=Genbank:WP_002211087.1;Name=WP_002211087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211087.1;transl_table=11 NC_005810.1 RefSeq gene 1764360 1764668 . - . ID=gene1680;Name=YP_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08435;old_locus_tag=YP1615%2CYP_1615 NC_005810.1 Protein Homology CDS 1764360 1764668 . - 0 ID=cds1634;Parent=gene1680;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11 NC_005810.1 RefSeq gene 1764708 1765028 . - . ID=gene1681;Name=YP_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08440;old_locus_tag=YP1616%2CYP_1616 NC_005810.1 Protein Homology CDS 1764708 1765028 . - 0 ID=cds1635;Parent=gene1681;Dbxref=Genbank:WP_002211085.1;Name=WP_002211085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211085.1;transl_table=11 NC_005810.1 RefSeq gene 1765122 1766504 . - . ID=gene1682;Name=YP_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08445;old_locus_tag=YP1617%2CYP_1617 NC_005810.1 Protein Homology CDS 1765122 1766504 . - 0 ID=cds1636;Parent=gene1682;Dbxref=Genbank:WP_002211084.1;Name=WP_002211084.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_002211084.1;transl_table=11 NC_005810.1 RefSeq gene 1766817 1767998 . + . ID=gene1683;Name=YP_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08450;old_locus_tag=YP1618%2CYP_1618 NC_005810.1 Protein Homology CDS 1766817 1767998 . + 0 ID=cds1637;Parent=gene1683;Dbxref=Genbank:WP_002211083.1;Name=WP_002211083.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_002211083.1;transl_table=11 NC_005810.1 RefSeq gene 1768124 1768381 . - . ID=gene1684;Name=YP_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08455;old_locus_tag=YP1619%2CYP_1619 NC_005810.1 Protein Homology CDS 1768124 1768381 . - 0 ID=cds1638;Parent=gene1684;Dbxref=Genbank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211082.1;transl_table=11 NC_005810.1 RefSeq gene 1768546 1769922 . + . ID=gene1685;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YP_RS08460;old_locus_tag=YP1620%2CYP_1620 NC_005810.1 Protein Homology CDS 1768546 1769922 . + 0 ID=cds1639;Parent=gene1685;Dbxref=Genbank:WP_002211081.1;Name=WP_002211081.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase component I;protein_id=WP_002211081.1;transl_table=11 NC_005810.1 RefSeq gene 1769919 1770518 . + . ID=gene1686;Name=YP_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08465;old_locus_tag=YP1621%2CYP_1621 NC_005810.1 Protein Homology CDS 1769919 1770518 . + 0 ID=cds1640;Parent=gene1686;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11 NC_005810.1 RefSeq gene 1771206 1772570 . + . ID=gene1687;Name=YP_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08470;old_locus_tag=YP1622%2CYP_1622 NC_005810.1 Protein Homology CDS 1771206 1772570 . + 0 ID=cds1641;Parent=gene1687;Dbxref=Genbank:WP_002211079.1;Name=WP_002211079.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_002211079.1;transl_table=11 NC_005810.1 RefSeq gene 1772850 1773347 . - . ID=gene1688;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YP_RS08475;old_locus_tag=YP1623%2CYP_1623 NC_005810.1 Protein Homology CDS 1772850 1773347 . - 0 ID=cds1642;Parent=gene1688;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11 NC_005810.1 RefSeq gene 1773368 1774930 . - . ID=gene1689;Name=YP_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08480;old_locus_tag=YP1624%2CYP_1624 NC_005810.1 Protein Homology CDS 1773368 1774930 . - 0 ID=cds1643;Parent=gene1689;Dbxref=Genbank:WP_002211077.1;Name=WP_002211077.1;gbkey=CDS;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211077.1;transl_table=11 NC_005810.1 RefSeq gene 1774998 1776365 . - . ID=gene1690;Name=YP_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08485;old_locus_tag=YP1625%2CYP_1625 NC_005810.1 Protein Homology CDS 1774998 1776365 . - 0 ID=cds1644;Parent=gene1690;Dbxref=Genbank:WP_002211076.1;Name=WP_002211076.1;gbkey=CDS;product=4-hydroxyphenylacetate permease;protein_id=WP_002211076.1;transl_table=11 NC_005810.1 RefSeq gene 1776391 1777197 . - . ID=gene1691;Name=YP_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08490;old_locus_tag=YP1626%2CYP_1626 NC_005810.1 Protein Homology CDS 1776391 1777197 . - 0 ID=cds1645;Parent=gene1691;Dbxref=Genbank:WP_002231102.1;Name=WP_002231102.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002231102.1;transl_table=11 NC_005810.1 RefSeq gene 1777208 1778011 . - . ID=gene1692;Name=YP_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08495;old_locus_tag=YP1627%2CYP_1627 NC_005810.1 Protein Homology CDS 1777208 1778011 . - 0 ID=cds1646;Parent=gene1692;Dbxref=Genbank:WP_002211074.1;Name=WP_002211074.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_002211074.1;transl_table=11 NC_005810.1 RefSeq gene 1778005 1778403 . - . ID=gene1693;Name=YP_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08500;old_locus_tag=YP1628%2CYP_1628 NC_005810.1 Protein Homology CDS 1778005 1778403 . - 0 ID=cds1647;Parent=gene1693;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11 NC_005810.1 RefSeq gene 1778428 1779285 . - . ID=gene1694;Name=YP_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08505;old_locus_tag=YP1629%2CYP_1629 NC_005810.1 Protein Homology CDS 1778428 1779285 . - 0 ID=cds1648;Parent=gene1694;Dbxref=Genbank:WP_002211072.1;Name=WP_002211072.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11 NC_005810.1 RefSeq gene 1779404 1780801 . - . ID=gene1695;Name=YP_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08510;old_locus_tag=YP1630%2CYP_1630 NC_005810.1 Protein Homology CDS 1779404 1780801 . - 0 ID=cds1649;Parent=gene1695;Dbxref=Genbank:WP_002211071.1;Name=WP_002211071.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_002211071.1;transl_table=11 NC_005810.1 RefSeq gene 1780798 1781562 . - . ID=gene1696;Name=YP_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08515 NC_005810.1 Protein Homology CDS 1780798 1781562 . - 0 ID=cds1650;Parent=gene1696;Dbxref=Genbank:WP_002214882.1;Name=WP_002214882.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214882.1;transl_table=11 NC_005810.1 RefSeq gene 1781559 1782191 . - . ID=gene1697;Name=YP_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08520 NC_005810.1 Protein Homology CDS 1781559 1782191 . - 0 ID=cds1651;Parent=gene1697;Dbxref=Genbank:WP_002214880.1;Name=WP_002214880.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214880.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1782202 1782237 . + . ID=id325;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1782567 1783034 . + . ID=gene1698;Name=YP_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08525;old_locus_tag=YP1632%2CYP_1632 NC_005810.1 Protein Homology CDS 1782567 1783034 . + 0 ID=cds1652;Parent=gene1698;Dbxref=Genbank:WP_002211070.1;Name=WP_002211070.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_002211070.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1782993 1783022 . + . ID=id326;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1783136 1784680 . - . ID=gene1699;Name=YP_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08530;old_locus_tag=YP1633%2CYP_1633 NC_005810.1 Protein Homology CDS 1783136 1784680 . - 0 ID=cds1653;Parent=gene1699;Dbxref=Genbank:WP_002231099.1;Name=WP_002231099.1;gbkey=CDS;product=membrane protein;protein_id=WP_002231099.1;transl_table=11 NC_005810.1 RefSeq gene 1785391 1786365 . + . ID=gene1700;Name=YP_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08535;old_locus_tag=YP1634%2CYP_1634 NC_005810.1 Protein Homology CDS 1785391 1786365 . + 0 ID=cds1654;Parent=gene1700;Dbxref=Genbank:WP_002211069.1;Name=WP_002211069.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NC_005810.1 RefSeq gene 1786457 1787254 . + . ID=gene1701;Name=YP_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08540;old_locus_tag=YP1635%2CYP_1635 NC_005810.1 Protein Homology CDS 1786457 1787254 . + 0 ID=cds1655;Parent=gene1701;Dbxref=Genbank:WP_002211068.1;Name=WP_002211068.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NC_005810.1 RefSeq gene 1787270 1788148 . + . ID=gene1702;Name=YP_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08545;old_locus_tag=YP1636%2CYP_1636 NC_005810.1 Protein Homology CDS 1787270 1788148 . + 0 ID=cds1656;Parent=gene1702;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1787273 1787302 . + . ID=id327;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1788348 1788809 . + . ID=gene1703;Name=YP_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08550;old_locus_tag=YP1637%2CYP_1637 NC_005810.1 Protein Homology CDS 1788348 1788809 . + 0 ID=cds1657;Parent=gene1703;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11 NC_005810.1 RefSeq gene 1789238 1789807 . + . ID=gene1704;Name=YP_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08555;old_locus_tag=YP1638%2CYP_1638 NC_005810.1 Protein Homology CDS 1789238 1789807 . + 0 ID=cds1658;Parent=gene1704;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11 NC_005810.1 RefSeq gene 1789968 1792181 . - . ID=gene1705;Name=YP_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08560 NC_005810.1 Protein Homology CDS 1789968 1792181 . - 0 ID=cds1659;Parent=gene1705;Dbxref=Genbank:WP_002211064.1;Name=WP_002211064.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211064.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1792201 1794160 . + . ID=id328;gbkey=repeat_region NC_005810.1 RefSeq region 1792203 1794155 . + . ID=id329;gbkey=mobile_element NC_005810.1 RefSeq gene 1792289 1793311 . + . ID=gene1706;Name=YP_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08565;old_locus_tag=YP1641%2CYP_1641 NC_005810.1 Protein Homology CDS 1792289 1793311 . + 0 ID=cds1660;Parent=gene1706;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 1793311 1794090 . + . ID=gene1707;Name=YP_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08570;old_locus_tag=YP1642%2CYP_1642 NC_005810.1 Protein Homology CDS 1793311 1794090 . + 0 ID=cds1661;Parent=gene1707;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 1794134 1794247 . - . ID=gene1708;Name=YP_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08575 NC_005810.1 Protein Homology CDS 1794134 1794247 . - 0 ID=cds1662;Parent=gene1708;Dbxref=Genbank:WP_002212894.1;Name=WP_002212894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212894.1;transl_table=11 NC_005810.1 RefSeq gene 1794689 1795270 . - . ID=gene1709;Name=YP_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08585;old_locus_tag=YP1644%2CYP_1644 NC_005810.1 Protein Homology CDS 1794689 1795270 . - 0 ID=cds1663;Parent=gene1709;Dbxref=Genbank:WP_000937857.1;Name=WP_000937857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000937857.1;transl_table=11 NC_005810.1 RefSeq gene 1795276 1795437 . - . ID=gene1710;Name=YP_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08590;old_locus_tag=YP1645%2CYP_1645 NC_005810.1 Protein Homology CDS 1795276 1795437 . - 0 ID=cds1664;Parent=gene1710;Dbxref=Genbank:WP_002214391.1;Name=WP_002214391.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214391.1;transl_table=11 NC_005810.1 RefSeq gene 1795459 1795644 . - . ID=gene1711;Name=YP_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08595;old_locus_tag=YP1646 NC_005810.1 Protein Homology CDS 1795459 1795644 . - 0 ID=cds1665;Parent=gene1711;Dbxref=Genbank:WP_000205185.1;Name=WP_000205185.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000205185.1;transl_table=11 NC_005810.1 RefSeq gene 1795784 1796218 . - . ID=gene1712;Name=YP_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08600;old_locus_tag=YP1647 NC_005810.1 Protein Homology CDS 1795784 1796218 . - 0 ID=cds1666;Parent=gene1712;Dbxref=Genbank:WP_002212886.1;Name=WP_002212886.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212886.1;transl_table=11 NC_005810.1 RefSeq gene 1796361 1796711 . - . ID=gene1713;Name=YP_RS08605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS08605;old_locus_tag=YP1648;partial=true;pseudo=true;start_range=.,1796361 NC_005810.1 Protein Homology CDS 1796361 1796711 . - 0 ID=cds1667;Parent=gene1713;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1796361;transl_table=11 NC_005810.1 RefSeq gene 1797584 1799605 . - . ID=gene1714;Name=YP_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08610;old_locus_tag=YP1649%2CYP_1649 NC_005810.1 Protein Homology CDS 1797584 1799605 . - 0 ID=cds1668;Parent=gene1714;Dbxref=Genbank:WP_000784549.1;Name=WP_000784549.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_000784549.1;transl_table=11 NC_005810.1 RefSeq gene 1799736 1801313 . - . ID=gene1715;Name=YP_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08615;old_locus_tag=YP1650%2CYP_1650 NC_005810.1 Protein Homology CDS 1799736 1801313 . - 0 ID=cds1669;Parent=gene1715;Dbxref=Genbank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;product=salicyl-AMP ligase;protein_id=WP_001088826.1;transl_table=11 NC_005810.1 RefSeq gene 1801317 1802120 . - . ID=gene1716;Name=YP_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08620;old_locus_tag=YP1651%2CYP_1651 NC_005810.1 Protein Homology CDS 1801317 1802120 . - 0 ID=cds1670;Parent=gene1716;Dbxref=Genbank:WP_002212799.1;Name=WP_002212799.1;gbkey=CDS;product=thioesterase;protein_id=WP_002212799.1;transl_table=11 NC_005810.1 RefSeq gene 1802117 1803217 . - . ID=gene1717;Name=YP_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08625;old_locus_tag=YP1652%2CYP_1652 NC_005810.1 Protein Homology CDS 1802117 1803217 . - 0 ID=cds1671;Parent=gene1717;Dbxref=Genbank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000982866.1;transl_table=11 NC_005810.1 RefSeq gene 1803214 1812705 . - . ID=gene1718;Name=YP_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08630;old_locus_tag=YP1653%2CYP_1653 NC_005810.1 Protein Homology CDS 1803214 1812705 . - 0 ID=cds1672;Parent=gene1718;Dbxref=Genbank:WP_011171835.1;Name=WP_011171835.1;gbkey=CDS;product=polyketide synthase;protein_id=WP_011171835.1;transl_table=11 NC_005810.1 RefSeq gene 1812793 1818900 . - . ID=gene1719;Name=YP_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08635;old_locus_tag=YP1654%2CYP_1654 NC_005810.1 Protein Homology CDS 1812793 1818900 . - 0 ID=cds1673;Parent=gene1719;Dbxref=Genbank:WP_002212775.1;Name=WP_002212775.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002212775.1;transl_table=11 NC_005810.1 RefSeq gene 1819091 1820050 . - . ID=gene1720;Name=YP_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08640;old_locus_tag=YP1655%2CYP_1655 NC_005810.1 Protein Homology CDS 1819091 1820050 . - 0 ID=cds1674;Parent=gene1720;Dbxref=Genbank:WP_000140406.1;Name=WP_000140406.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_000140406.1;transl_table=11 NC_005810.1 RefSeq gene 1820307 1822019 . + . ID=gene1721;Name=YP_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08645;old_locus_tag=YP1656%2CYP_1656 NC_005810.1 Protein Homology CDS 1820307 1822019 . + 0 ID=cds1675;Parent=gene1721;Dbxref=Genbank:WP_001327262.1;Name=WP_001327262.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_001327262.1;transl_table=11 NC_005810.1 RefSeq gene 1822006 1823808 . + . ID=gene1722;Name=YP_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08650;old_locus_tag=YP1657%2CYP_1657 NC_005810.1 Protein Homology CDS 1822006 1823808 . + 0 ID=cds1676;Parent=gene1722;Dbxref=Genbank:WP_002212761.1;Name=WP_002212761.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212761.1;transl_table=11 NC_005810.1 RefSeq gene 1823801 1825081 . + . ID=gene1723;Name=YP_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08655;old_locus_tag=YP1658%2CYP_1658 NC_005810.1 Protein Homology CDS 1823801 1825081 . + 0 ID=cds1677;Parent=gene1723;Dbxref=Genbank:WP_001286280.1;Name=WP_001286280.1;gbkey=CDS;product=signal transducer;protein_id=WP_001286280.1;transl_table=11 NC_005810.1 RefSeq gene 1825109 1826413 . + . ID=gene1724;Name=YP_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08660;old_locus_tag=YP1659%2CYP_1659 NC_005810.1 Protein Homology CDS 1825109 1826413 . + 0 ID=cds1678;Parent=gene1724;Dbxref=Genbank:WP_002230823.1;Name=WP_002230823.1;Note=catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin;gbkey=CDS;product=salicylate synthase;protein_id=WP_002230823.1;transl_table=11 NC_005810.1 RefSeq gene 1826607 1827869 . - . ID=gene1725;Name=YP_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08665;old_locus_tag=YP1660%2CYP_1660 NC_005810.1 Protein Homology CDS 1826607 1827869 . - 0 ID=cds1679;Parent=gene1725;Dbxref=Genbank:WP_002212753.1;Name=WP_002212753.1;gbkey=CDS;product=integrase;protein_id=WP_002212753.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1828030 1828136 . + . ID=id330;gbkey=repeat_region NC_005810.1 RefSeq gene 1828031 1828106 . - . ID=gene1726;Name=YP_RS08670;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS08670;old_locus_tag=tRNA-Asn_3%2CYP_t35 NC_005810.1 tRNAscan-SE tRNA 1828031 1828106 . - . ID=rna42;Parent=gene1726;anticodon=(pos:complement(1828071..1828073));gbkey=tRNA;product=tRNA-Asn NC_005810.1 tRNAscan-SE exon 1828031 1828106 . - . ID=id331;Parent=rna42;anticodon=(pos:complement(1828071..1828073));gbkey=tRNA;product=tRNA-Asn NC_005810.1 RefSeq gene 1828409 1829149 . - . ID=gene1727;Name=YP_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08675;old_locus_tag=YP1661%2CYP_1661 NC_005810.1 Protein Homology CDS 1828409 1829149 . - 0 ID=cds1680;Parent=gene1727;Dbxref=Genbank:WP_002227954.1;Name=WP_002227954.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002227954.1;transl_table=11 NC_005810.1 RefSeq gene 1829146 1830495 . - . ID=gene1728;Name=YP_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08680;old_locus_tag=YP1662%2CYP_1662 NC_005810.1 Protein Homology CDS 1829146 1830495 . - 0 ID=cds1681;Parent=gene1728;Dbxref=Genbank:WP_002213964.1;Name=WP_002213964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213964.1;transl_table=11 NC_005810.1 RefSeq gene 1830511 1833075 . - . ID=gene1729;Name=YP_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08685;old_locus_tag=YP1663%2CYP_1663 NC_005810.1 Protein Homology CDS 1830511 1833075 . - 0 ID=cds1682;Parent=gene1729;Dbxref=Genbank:WP_002212750.1;Name=WP_002212750.1;gbkey=CDS;product=ferrous iron transporter B;protein_id=WP_002212750.1;transl_table=11 NC_005810.1 RefSeq gene 1833151 1833795 . - . ID=gene1730;Name=YP_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08690;old_locus_tag=YP1664%2CYP_1664 NC_005810.1 Protein Homology CDS 1833151 1833795 . - 0 ID=cds1683;Parent=gene1730;Dbxref=Genbank:WP_002212747.1;Name=WP_002212747.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002212747.1;transl_table=11 NC_005810.1 RefSeq gene 1833888 1834418 . - . ID=gene1731;Name=YP_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08695;old_locus_tag=YP1665%2CYP_1665 NC_005810.1 Protein Homology CDS 1833888 1834418 . - 0 ID=cds1684;Parent=gene1731;Dbxref=Genbank:WP_002213971.1;Name=WP_002213971.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002213971.1;transl_table=11 NC_005810.1 RefSeq gene 1834931 1838659 . - . ID=gene1732;Name=YP_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08700;old_locus_tag=YP1666%2CYP_1666 NC_005810.1 Protein Homology CDS 1834931 1838659 . - 0 ID=cds1685;Parent=gene1732;Dbxref=Genbank:WP_002220434.1;Name=WP_002220434.1;gbkey=CDS;product=histidine protein kinase;protein_id=WP_002220434.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1835118 1835153 . + . ID=id332;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1838775 1839407 . - . ID=gene1733;Name=YP_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08705;old_locus_tag=YP1667%2CYP_1667 NC_005810.1 Protein Homology CDS 1838775 1839407 . - 0 ID=cds1686;Parent=gene1733;Dbxref=Genbank:WP_002212073.1;Name=WP_002212073.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002212073.1;transl_table=11 NC_005810.1 RefSeq gene 1840233 1841555 . - . ID=gene1734;Name=YP_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08710;old_locus_tag=YP1668%2CYP_1668 NC_005810.1 Protein Homology CDS 1840233 1841555 . - 0 ID=cds1687;Parent=gene1734;Dbxref=Genbank:WP_002212070.1;Name=WP_002212070.1;gbkey=CDS;product=4-hydroxybutyrate CoA-transferase;protein_id=WP_002212070.1;transl_table=11 NC_005810.1 RefSeq gene 1841578 1842105 . - . ID=gene1735;Name=YP_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08715;old_locus_tag=YP1669%2CYP_1669 NC_005810.1 Protein Homology CDS 1841578 1842105 . - 0 ID=cds1688;Parent=gene1735;Dbxref=Genbank:WP_002212069.1;Name=WP_002212069.1;gbkey=CDS;product=molybdenum cofactor biosynthesis protein MoeC;protein_id=WP_002212069.1;transl_table=11 NC_005810.1 RefSeq gene 1842170 1843012 . - . ID=gene1736;Name=YP_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08720;old_locus_tag=YP1670%2CYP_1670 NC_005810.1 Protein Homology CDS 1842170 1843012 . - 0 ID=cds1689;Parent=gene1736;Dbxref=Genbank:WP_002212068.1;Name=WP_002212068.1;gbkey=CDS;product=citrate lyase subunit beta;protein_id=WP_002212068.1;transl_table=11 NC_005810.1 RefSeq gene 1843107 1843985 . + . ID=gene1737;Name=YP_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08725;old_locus_tag=YP1671%2CYP_1671 NC_005810.1 Protein Homology CDS 1843107 1843985 . + 0 ID=cds1690;Parent=gene1737;Dbxref=Genbank:WP_002212067.1;Name=WP_002212067.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212067.1;transl_table=11 NC_005810.1 RefSeq gene 1844060 1844533 . - . ID=gene1738;Name=YP_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08730;old_locus_tag=YP1672%2CYP_1672 NC_005810.1 Protein Homology CDS 1844060 1844533 . - 0 ID=cds1691;Parent=gene1738;Dbxref=Genbank:WP_002212066.1;Name=WP_002212066.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212066.1;transl_table=11 NC_005810.1 RefSeq gene 1844558 1845118 . - . ID=gene1739;Name=YP_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08735;old_locus_tag=YP1673%2CYP_1673 NC_005810.1 Protein Homology CDS 1844558 1845118 . - 0 ID=cds1692;Parent=gene1739;Dbxref=Genbank:WP_002212065.1;Name=WP_002212065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212065.1;transl_table=11 NC_005810.1 RefSeq gene 1845338 1846567 . - . ID=gene1740;Name=YP_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08740;old_locus_tag=YP1674%2CYP_1674 NC_005810.1 Protein Homology CDS 1845338 1846567 . - 0 ID=cds1693;Parent=gene1740;Dbxref=Genbank:WP_002212064.1;Name=WP_002212064.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002212064.1;transl_table=11 NC_005810.1 RefSeq gene 1846633 1847502 . - . ID=gene1741;Name=YP_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08745;old_locus_tag=YP1675%2CYP_1675 NC_005810.1 Protein Homology CDS 1846633 1847502 . - 0 ID=cds1694;Parent=gene1741;Dbxref=Genbank:WP_002212063.1;Name=WP_002212063.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212063.1;transl_table=11 NC_005810.1 RefSeq gene 1847614 1848576 . + . ID=gene1742;Name=YP_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08750;old_locus_tag=YP1676%2CYP_1676 NC_005810.1 Protein Homology CDS 1847614 1848576 . + 0 ID=cds1695;Parent=gene1742;Dbxref=Genbank:WP_002212062.1;Name=WP_002212062.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212062.1;transl_table=11 NC_005810.1 RefSeq gene 1848881 1849480 . - . ID=gene1743;Name=YP_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08755;old_locus_tag=YP1677%2CYP_1677 NC_005810.1 Protein Homology CDS 1848881 1849480 . - 0 ID=cds1696;Parent=gene1743;Dbxref=Genbank:WP_002212061.1;Name=WP_002212061.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002212061.1;transl_table=11 NC_005810.1 RefSeq gene 1849832 1850992 . + . ID=gene1744;Name=YP_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08760;old_locus_tag=YP1678%2CYP_1678 NC_005810.1 Protein Homology CDS 1849832 1850992 . + 0 ID=cds1697;Parent=gene1744;Dbxref=Genbank:WP_002212060.1;Name=WP_002212060.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002212060.1;transl_table=11 NC_005810.1 RefSeq gene 1851188 1852717 . - . ID=gene1745;Name=YP_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08765;old_locus_tag=YP1679%2CYP_1679 NC_005810.1 Protein Homology CDS 1851188 1852717 . - 0 ID=cds1698;Parent=gene1745;Dbxref=Genbank:WP_002212059.1;Name=WP_002212059.1;Note=involved in the transporte of L-asparagine;gbkey=CDS;product=L-asparagine permease;protein_id=WP_002212059.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1853382 1853417 . + . ID=id333;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1853439 1854209 . - . ID=gene1746;Name=YP_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08770;old_locus_tag=YP1680%2CYP_1680 NC_005810.1 Protein Homology CDS 1853439 1854209 . - 0 ID=cds1699;Parent=gene1746;Dbxref=Genbank:WP_002212058.1;Name=WP_002212058.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002212058.1;transl_table=11 NC_005810.1 RefSeq gene 1855420 1856427 . + . ID=gene1747;Name=YP_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08775;old_locus_tag=YP1682%2CYP_1682 NC_005810.1 Protein Homology CDS 1855420 1856427 . + 0 ID=cds1700;Parent=gene1747;Dbxref=Genbank:WP_002212056.1;Name=WP_002212056.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002212056.1;transl_table=11 NC_005810.1 RefSeq gene 1856538 1858178 . + . ID=gene1748;Name=YP_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08780;old_locus_tag=YP1683%2CYP_1683 NC_005810.1 Protein Homology CDS 1856538 1858178 . + 0 ID=cds1701;Parent=gene1748;Dbxref=Genbank:WP_002213976.1;Name=WP_002213976.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213976.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1858185 1858354 . + . ID=id334;gbkey=repeat_region NC_005810.1 RefSeq gene 1858758 1860677 . + . ID=gene1749;Name=YP_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08785;old_locus_tag=YP1685%2CYP_1685 NC_005810.1 Protein Homology CDS 1858758 1860677 . + 0 ID=cds1702;Parent=gene1749;Dbxref=Genbank:WP_002213978.1;Name=WP_002213978.1;gbkey=CDS;product=iron permease;protein_id=WP_002213978.1;transl_table=11 NC_005810.1 RefSeq gene 1860881 1861408 . + . ID=gene1750;Name=YP_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08790;old_locus_tag=YP1686%2CYP_1686 NC_005810.1 Protein Homology CDS 1860881 1861408 . + 0 ID=cds1703;Parent=gene1750;Dbxref=Genbank:WP_002212053.1;Name=WP_002212053.1;gbkey=CDS;product=iron transporter;protein_id=WP_002212053.1;transl_table=11 NC_005810.1 RefSeq gene 1861709 1863118 . + . ID=gene1751;Name=YP_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08795;old_locus_tag=YP1687%2CYP_1687 NC_005810.1 Protein Homology CDS 1861709 1863118 . + 0 ID=cds1704;Parent=gene1751;Dbxref=Genbank:WP_002212052.1;Name=WP_002212052.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212052.1;transl_table=11 NC_005810.1 RefSeq gene 1863121 1864413 . + . ID=gene1752;Name=YP_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08800;old_locus_tag=YP1688%2CYP_1688 NC_005810.1 Protein Homology CDS 1863121 1864413 . + 0 ID=cds1705;Parent=gene1752;Dbxref=Genbank:WP_002212051.1;Name=WP_002212051.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212051.1;transl_table=11 NC_005810.1 RefSeq gene 1864403 1865566 . + . ID=gene1753;Name=YP_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08805;old_locus_tag=YP1689%2CYP_1689 NC_005810.1 Protein Homology CDS 1864403 1865566 . + 0 ID=cds1706;Parent=gene1753;Dbxref=Genbank:WP_002212050.1;Name=WP_002212050.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212050.1;transl_table=11 NC_005810.1 RefSeq gene 1865570 1866283 . + . ID=gene1754;Name=YP_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08810;old_locus_tag=YP1690%2CYP_1690 NC_005810.1 Protein Homology CDS 1865570 1866283 . + 0 ID=cds1707;Parent=gene1754;Dbxref=Genbank:WP_002212049.1;Name=WP_002212049.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002212049.1;transl_table=11 NC_005810.1 RefSeq gene 1866273 1866770 . + . ID=gene1755;Name=YP_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08815;old_locus_tag=YP1691%2CYP_1691 NC_005810.1 Protein Homology CDS 1866273 1866770 . + 0 ID=cds1708;Parent=gene1755;Dbxref=Genbank:WP_002212048.1;Name=WP_002212048.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002212048.1;transl_table=11 NC_005810.1 RefSeq gene 1866770 1867081 . + . ID=gene1756;Name=YP_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08820;old_locus_tag=YP1692%2CYP_1692 NC_005810.1 Protein Homology CDS 1866770 1867081 . + 0 ID=cds1709;Parent=gene1756;Dbxref=Genbank:WP_002227951.1;Name=WP_002227951.1;gbkey=CDS;product=cytochrome;protein_id=WP_002227951.1;transl_table=11 NC_005810.1 RefSeq gene 1867254 1868141 . + . ID=gene1757;Name=YP_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08825;old_locus_tag=YP1693%2CYP_1693 NC_005810.1 Protein Homology CDS 1867254 1868141 . + 0 ID=cds1710;Parent=gene1757;Dbxref=Genbank:WP_002212046.1;Name=WP_002212046.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;product=tellurite resistance methyltransferase TehB;protein_id=WP_002212046.1;transl_table=11 NC_005810.1 RefSeq gene 1868282 1869499 . + . ID=gene1758;Name=YP_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08830;old_locus_tag=YP1694%2CYP_1694 NC_005810.1 Protein Homology CDS 1868282 1869499 . + 0 ID=cds1711;Parent=gene1758;Dbxref=Genbank:WP_002212045.1;Name=WP_002212045.1;gbkey=CDS;product=endopeptidase;protein_id=WP_002212045.1;transl_table=11 NC_005810.1 RefSeq gene 1870168 1872636 . + . ID=gene1759;Name=hmsH;gbkey=Gene;gene=hmsH;gene_biotype=protein_coding;locus_tag=YP_RS08835;old_locus_tag=YP1695%2CYP_1695 NC_005810.1 Protein Homology CDS 1870168 1872636 . + 0 ID=cds1712;Parent=gene1759;Dbxref=Genbank:WP_011171839.1;Name=WP_011171839.1;Note=in Yersinia this protein is important for biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsH;product=hypothetical protein;protein_id=WP_011171839.1;transl_table=11 NC_005810.1 RefSeq gene 1872649 1874670 . + . ID=gene1760;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=YP_RS08840;old_locus_tag=YP1696%2CYP_1696 NC_005810.1 Protein Homology CDS 1872649 1874670 . + 0 ID=cds1713;Parent=gene1760;Dbxref=Genbank:WP_002212043.1;Name=WP_002212043.1;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export;gbkey=CDS;gene=pgaB;product=biofilm PGA synthesis lipoprotein PgaB;protein_id=WP_002212043.1;transl_table=11 NC_005810.1 RefSeq gene 1874660 1875994 . + . ID=gene1761;Name=YP_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08845;old_locus_tag=YP1697%2CYP_1697 NC_005810.1 Protein Homology CDS 1874660 1875994 . + 0 ID=cds1714;Parent=gene1761;Dbxref=Genbank:WP_002224456.1;Name=WP_002224456.1;Note=predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein;gbkey=CDS;product=N-glycosyltransferase;protein_id=WP_002224456.1;transl_table=11 NC_005810.1 RefSeq gene 1875991 1876458 . + . ID=gene1762;Name=hmsS;gbkey=Gene;gene=hmsS;gene_biotype=protein_coding;locus_tag=YP_RS08850;old_locus_tag=YP1698%2CYP_1698 NC_005810.1 Protein Homology CDS 1875991 1876458 . + 0 ID=cds1715;Parent=gene1762;Dbxref=Genbank:WP_002212041.1;Name=WP_002212041.1;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsS;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_002212041.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1876579 1876616 . + . ID=id335;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1876981 1877691 . + . ID=gene1763;Name=YP_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08855;old_locus_tag=YP1699 NC_005810.1 Protein Homology CDS 1876981 1877691 . + 0 ID=cds1716;Parent=gene1763;Dbxref=Genbank:WP_002367661.1;Name=WP_002367661.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002367661.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1878177 1879494 . + . ID=id336;gbkey=repeat_region NC_005810.1 RefSeq region 1878179 1879493 . - . ID=id337;gbkey=mobile_element NC_005810.1 RefSeq gene 1878214 1879422 . - . ID=gene1764;Name=YP_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08860;old_locus_tag=YP1701%2CYP_1701 NC_005810.1 Protein Homology CDS 1878214 1879422 . - 0 ID=cds1717;Parent=gene1764;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 1879453 1879731 . + . ID=gene1765;Name=YP_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08865 NC_005810.1 Protein Homology CDS 1879453 1879731 . + 0 ID=cds1718;Parent=gene1765;Dbxref=Genbank:WP_052638304.1;Name=WP_052638304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_052638304.1;transl_table=11 NC_005810.1 RefSeq gene 1879791 1880579 . + . ID=gene1766;Name=YP_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08870;old_locus_tag=YP1702%2CYP_1702 NC_005810.1 Protein Homology CDS 1879791 1880579 . + 0 ID=cds1719;Parent=gene1766;Dbxref=Genbank:WP_002212037.1;Name=WP_002212037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212037.1;transl_table=11 NC_005810.1 RefSeq gene 1880682 1881782 . - . ID=gene1767;Name=YP_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08875;old_locus_tag=YP1703%2CYP_1703 NC_005810.1 Protein Homology CDS 1880682 1881782 . - 0 ID=cds1720;Parent=gene1767;Dbxref=Genbank:WP_002212036.1;Name=WP_002212036.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002212036.1;transl_table=11 NC_005810.1 RefSeq gene 1882331 1884112 . - . ID=gene1768;Name=YP_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08880;old_locus_tag=YP1704%2CYP_1704 NC_005810.1 Protein Homology CDS 1882331 1884112 . - 0 ID=cds1721;Parent=gene1768;Dbxref=Genbank:WP_002212035.1;Name=WP_002212035.1;gbkey=CDS;product=nitrate/nitrite two-component system sensor histidine kinase;protein_id=WP_002212035.1;transl_table=11 NC_005810.1 RefSeq gene 1884422 1885843 . + . ID=gene1769;Name=YP_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08885;old_locus_tag=YP1705%2CYP_1705 NC_005810.1 Protein Homology CDS 1884422 1885843 . + 0 ID=cds1722;Parent=gene1769;Dbxref=Genbank:WP_002212033.1;Name=WP_002212033.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212033.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1885869 1885898 . + . ID=id338;gbkey=repeat_region NC_005810.1 RefSeq gene 1886139 1886282 . + . ID=gene1770;Name=YP_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08890;old_locus_tag=YP1706 NC_005810.1 Protein Homology CDS 1886139 1886282 . + 0 ID=cds1723;Parent=gene1770;Dbxref=Genbank:WP_002353347.1;Name=WP_002353347.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353347.1;transl_table=11 NC_005810.1 RefSeq gene 1886480 1887724 . + . ID=gene1771;Name=YP_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08895;old_locus_tag=YP1707%2CYP_1707 NC_005810.1 Protein Homology CDS 1886480 1887724 . + 0 ID=cds1724;Parent=gene1771;Dbxref=Genbank:WP_002216140.1;Name=WP_002216140.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;gbkey=CDS;product=succinylornithine aminotransferase;protein_id=WP_002216140.1;transl_table=11 NC_005810.1 RefSeq gene 1887754 1888806 . + . ID=gene1772;Name=YP_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08900;old_locus_tag=YP1708%2CYP_1708 NC_005810.1 Protein Homology CDS 1887754 1888806 . + 0 ID=cds1725;Parent=gene1772;Dbxref=Genbank:WP_002212031.1;Name=WP_002212031.1;gbkey=CDS;product=arginine N-succinyltransferase;protein_id=WP_002212031.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1888587 1888616 . + . ID=id339;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1888803 1890320 . + . ID=gene1773;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=YP_RS08905;old_locus_tag=YP1709%2CYP_1709 NC_005810.1 Protein Homology CDS 1888803 1890320 . + 0 ID=cds1726;Parent=gene1773;Dbxref=Genbank:WP_002212030.1;Name=WP_002212030.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;product=N-succinylglutamate 5-semialdehyde dehydrogenase;protein_id=WP_002212030.1;transl_table=11 NC_005810.1 RefSeq gene 1890344 1891687 . + . ID=gene1774;Name=YP_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08910;old_locus_tag=YP1710%2CYP_1710 NC_005810.1 Protein Homology CDS 1890344 1891687 . + 0 ID=cds1727;Parent=gene1774;Dbxref=Genbank:WP_002212029.1;Name=WP_002212029.1;gbkey=CDS;product=N-succinylarginine dihydrolase;protein_id=WP_002212029.1;transl_table=11 NC_005810.1 RefSeq gene 1891748 1892740 . + . ID=gene1775;Name=YP_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08915;old_locus_tag=YP1711%2CYP_1711 NC_005810.1 Protein Homology CDS 1891748 1892740 . + 0 ID=cds1728;Parent=gene1775;Dbxref=Genbank:WP_002212028.1;Name=WP_002212028.1;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=WP_002212028.1;transl_table=11 NC_005810.1 RefSeq gene 1893468 1894550 . + . ID=gene1776;Name=YP_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08920;old_locus_tag=YP1712%2CYP_1712 NC_005810.1 Protein Homology CDS 1893468 1894550 . + 0 ID=cds1729;Parent=gene1776;Dbxref=Genbank:WP_002230843.1;Name=WP_002230843.1;gbkey=CDS;product=porin;protein_id=WP_002230843.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1894616 1894719 . + . ID=id340;Note=degenerate repeat region containing 13 copies of a 8bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1894867 1895673 . - . ID=gene1777;Name=YP_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08925;old_locus_tag=YP1713%2CYP_1713 NC_005810.1 Protein Homology CDS 1894867 1895673 . - 0 ID=cds1730;Parent=gene1777;Dbxref=Genbank:WP_002211282.1;Name=WP_002211282.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_002211282.1;transl_table=11 NC_005810.1 RefSeq gene 1895670 1896890 . - . ID=gene1778;Name=YP_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08930;old_locus_tag=YP1714%2CYP_1714 NC_005810.1 Protein Homology CDS 1895670 1896890 . - 0 ID=cds1731;Parent=gene1778;Dbxref=Genbank:WP_002211281.1;Name=WP_002211281.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_002211281.1;transl_table=11 NC_005810.1 RefSeq gene 1897094 1897441 . - . ID=gene1779;Name=YP_RS08935;end_range=1897441,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS08935;old_locus_tag=YP1715;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 1897094 1897441 . - 0 ID=cds1732;Parent=gene1779;end_range=1897441,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 1897435 1899394 . + . ID=id341;gbkey=repeat_region NC_005810.1 RefSeq region 1897440 1899392 . - . ID=id342;gbkey=mobile_element NC_005810.1 RefSeq gene 1897505 1898284 . - . ID=gene1780;Name=YP_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08940;old_locus_tag=YP1716%2CYP_1716 NC_005810.1 Protein Homology CDS 1897505 1898284 . - 0 ID=cds1733;Parent=gene1780;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 1898284 1899306 . - . ID=gene1781;Name=YP_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08945;old_locus_tag=YP1717%2CYP_1717 NC_005810.1 Protein Homology CDS 1898284 1899306 . - 0 ID=cds1734;Parent=gene1781;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 1899713 1900102 . + . ID=gene1782;Name=YP_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08950;old_locus_tag=YP1718%2CYP_1718 NC_005810.1 Protein Homology CDS 1899713 1900102 . + 0 ID=cds1735;Parent=gene1782;Dbxref=Genbank:WP_002215943.1;Name=WP_002215943.1;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002215943.1;transl_table=11 NC_005810.1 RefSeq gene 1900212 1900451 . - . ID=gene1783;Name=YP_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08955;old_locus_tag=YP1719%2CYP_1719 NC_005810.1 Protein Homology CDS 1900212 1900451 . - 0 ID=cds1736;Parent=gene1783;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11 NC_005810.1 RefSeq gene 1900659 1901648 . - . ID=gene1784;Name=YP_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08960;old_locus_tag=YP1720%2CYP_1720 NC_005810.1 Protein Homology CDS 1900659 1901648 . - 0 ID=cds1737;Parent=gene1784;Dbxref=Genbank:WP_002230846.1;Name=WP_002230846.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002230846.1;transl_table=11 NC_005810.1 RefSeq gene 1901854 1904301 . - . ID=gene1785;Name=YP_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08965;old_locus_tag=YP1721%2CYP_1721 NC_005810.1 Protein Homology CDS 1901854 1904301 . - 0 ID=cds1738;Parent=gene1785;Dbxref=Genbank:WP_002210857.1;Name=WP_002210857.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210857.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1904351 1904452 . + . ID=id343;Note=degenerate repeat region containing 2 copies of a 51bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1904455 1905207 . - . ID=gene1786;Name=YP_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08970;old_locus_tag=YP1722%2CYP_1722 NC_005810.1 Protein Homology CDS 1904455 1905207 . - 0 ID=cds1739;Parent=gene1786;Dbxref=Genbank:WP_002210856.1;Name=WP_002210856.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210856.1;transl_table=11 NC_005810.1 RefSeq gene 1905238 1905795 . - . ID=gene1787;Name=YP_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08975;old_locus_tag=YP1723%2CYP_1723 NC_005810.1 Protein Homology CDS 1905238 1905795 . - 0 ID=cds1740;Parent=gene1787;Dbxref=Genbank:WP_002216611.1;Name=WP_002216611.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002216611.1;transl_table=11 NC_005810.1 RefSeq gene 1905816 1906307 . - . ID=gene1788;Name=YP_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08980;old_locus_tag=YP1724%2CYP_1724 NC_005810.1 Protein Homology CDS 1905816 1906307 . - 0 ID=cds1741;Parent=gene1788;Dbxref=Genbank:WP_002210853.1;Name=WP_002210853.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210853.1;transl_table=11 NC_005810.1 RefSeq gene 1906352 1906906 . - . ID=gene1789;Name=YP_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08985;old_locus_tag=YP1725%2CYP_1725 NC_005810.1 Protein Homology CDS 1906352 1906906 . - 0 ID=cds1742;Parent=gene1789;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11 NC_005810.1 RefSeq gene 1907386 1910037 . - . ID=gene1790;Name=YP_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08990;old_locus_tag=YP1726%2CYP_1726 NC_005810.1 Protein Homology CDS 1907386 1910037 . - 0 ID=cds1743;Parent=gene1790;Dbxref=Genbank:WP_002216616.1;Name=WP_002216616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216616.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1908546 1908587 . + . ID=id344;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1910006 1911253 . - . ID=gene1791;Name=YP_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS08995;old_locus_tag=YP1727%2CYP_1727 NC_005810.1 Protein Homology CDS 1910006 1911253 . - 0 ID=cds1744;Parent=gene1791;Dbxref=Genbank:WP_002367629.1;Name=WP_002367629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002367629.1;transl_table=11 NC_005810.1 RefSeq gene 1911485 1911982 . + . ID=gene1792;Name=YP_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09000;old_locus_tag=YP1728%2CYP_1728 NC_005810.1 Protein Homology CDS 1911485 1911982 . + 0 ID=cds1745;Parent=gene1792;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11 NC_005810.1 RefSeq gene 1912078 1912791 . + . ID=gene1793;Name=YP_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09005;old_locus_tag=YP1729%2CYP_1729 NC_005810.1 Protein Homology CDS 1912078 1912791 . + 0 ID=cds1746;Parent=gene1793;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NC_005810.1 RefSeq gene 1912811 1914883 . + . ID=gene1794;Name=YP_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09010;old_locus_tag=YP1730%2CYP_1730 NC_005810.1 Protein Homology CDS 1912811 1914883 . + 0 ID=cds1747;Parent=gene1794;Dbxref=Genbank:WP_002210848.1;Name=WP_002210848.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_002210848.1;transl_table=11 NC_005810.1 RefSeq gene 1915338 1916219 . + . ID=gene1795;Name=YP_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09015;old_locus_tag=YP1731%2CYP_1731 NC_005810.1 Protein Homology CDS 1915338 1916219 . + 0 ID=cds1748;Parent=gene1795;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NC_005810.1 RefSeq gene 1916877 1917419 . + . ID=gene1796;Name=YP_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09020;old_locus_tag=YP1732%2CYP_1732 NC_005810.1 Protein Homology CDS 1916877 1917419 . + 0 ID=cds1749;Parent=gene1796;Dbxref=Genbank:WP_002210846.1;Name=WP_002210846.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002210846.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1917412 1917479 . + . ID=id345;Note=degenerate repeat region containing 2 copies of a 34bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1917665 1918351 . + . ID=gene1797;Name=YP_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09025;old_locus_tag=YP1733%2CYP_1733 NC_005810.1 Protein Homology CDS 1917665 1918351 . + 0 ID=cds1750;Parent=gene1797;Dbxref=Genbank:WP_002354110.1;Name=WP_002354110.1;gbkey=CDS;product=fimbrial assembly protein StbE;protein_id=WP_002354110.1;transl_table=11 NC_005810.1 RefSeq gene 1918433 1921045 . + . ID=gene1798;Name=YP_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09030;old_locus_tag=YP1734%2CYP_1734 NC_005810.1 Protein Homology CDS 1918433 1921045 . + 0 ID=cds1751;Parent=gene1798;Dbxref=Genbank:WP_002210844.1;Name=WP_002210844.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210844.1;transl_table=11 NC_005810.1 RefSeq gene 1921042 1922205 . + . ID=gene1799;Name=YP_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09035;old_locus_tag=YP1735%2CYP_1735 NC_005810.1 Protein Homology CDS 1921042 1922205 . + 0 ID=cds1752;Parent=gene1799;Dbxref=Genbank:WP_002215120.1;Name=WP_002215120.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11 NC_005810.1 RefSeq gene 1922202 1923005 . + . ID=gene1800;Name=YP_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09040;old_locus_tag=YP1736%2CYP_1736 NC_005810.1 Protein Homology CDS 1922202 1923005 . + 0 ID=cds1753;Parent=gene1800;Dbxref=Genbank:WP_002210843.1;Name=WP_002210843.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210843.1;transl_table=11 NC_005810.1 RefSeq gene 1923059 1924426 . - . ID=gene1801;Name=YP_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09045;old_locus_tag=YP1737%2CYP_1737 NC_005810.1 Protein Homology CDS 1923059 1924426 . - 0 ID=cds1754;Parent=gene1801;Dbxref=Genbank:WP_002210842.1;Name=WP_002210842.1;gbkey=CDS;product=multidrug MFS transporter;protein_id=WP_002210842.1;transl_table=11 NC_005810.1 RefSeq gene 1924753 1925919 . + . ID=gene1802;Name=YP_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09050;old_locus_tag=YP1738%2CYP_1738 NC_005810.1 Protein Homology CDS 1924753 1925919 . + 0 ID=cds1755;Parent=gene1802;Dbxref=Genbank:WP_002210841.1;Name=WP_002210841.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_002210841.1;transl_table=11 NC_005810.1 RefSeq gene 1926106 1926897 . + . ID=gene1803;Name=YP_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09055;old_locus_tag=YP1739%2CYP_1739 NC_005810.1 Protein Homology CDS 1926106 1926897 . + 0 ID=cds1756;Parent=gene1803;Dbxref=Genbank:WP_002210840.1;Name=WP_002210840.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002210840.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1926961 1926980 . + . ID=id346;Note=exact repeat region containing 2 copies of a 10 bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1927086 1927121 . + . ID=id347;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1927282 1928133 . + . ID=gene1804;Name=YP_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09060;old_locus_tag=YP1740%2CYP_1740 NC_005810.1 Protein Homology CDS 1927282 1928133 . + 0 ID=cds1757;Parent=gene1804;Dbxref=Genbank:WP_002210839.1;Name=WP_002210839.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11 NC_005810.1 RefSeq gene 1928348 1929739 . - . ID=gene1805;Name=YP_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09065;old_locus_tag=YP1741%2CYP_1741 NC_005810.1 Protein Homology CDS 1928348 1929739 . - 0 ID=cds1758;Parent=gene1805;Dbxref=Genbank:WP_016595873.1;Name=WP_016595873.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_016595873.1;transl_table=11 NC_005810.1 RefSeq gene 1929943 1930491 . - . ID=gene1806;Name=YP_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09070;old_locus_tag=YP1742%2CYP_1742 NC_005810.1 Protein Homology CDS 1929943 1930491 . - 0 ID=cds1759;Parent=gene1806;Dbxref=Genbank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210837.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1930769 1930822 . + . ID=id348;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1930971 1931681 . - . ID=gene1807;Name=YP_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09075;old_locus_tag=YP1743%2CYP_1743 NC_005810.1 Protein Homology CDS 1930971 1931681 . - 0 ID=cds1760;Parent=gene1807;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11 NC_005810.1 RefSeq gene 1931979 1933271 . - . ID=gene1808;Name=YP_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09080;old_locus_tag=YP1744%2CYP_1744 NC_005810.1 Protein Homology CDS 1931979 1933271 . - 0 ID=cds1761;Parent=gene1808;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NC_005810.1 RefSeq gene 1933287 1934414 . - . ID=gene1809;Name=YP_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09085;old_locus_tag=YP1745%2CYP_1745 NC_005810.1 Protein Homology CDS 1933287 1934414 . - 0 ID=cds1762;Parent=gene1809;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NC_005810.1 RefSeq gene 1934428 1935348 . - . ID=gene1810;Name=YP_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09090;old_locus_tag=YP1746%2CYP_1746 NC_005810.1 Protein Homology CDS 1934428 1935348 . - 0 ID=cds1763;Parent=gene1810;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NC_005810.1 RefSeq gene 1935341 1936231 . - . ID=gene1811;Name=YP_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09095;old_locus_tag=YP1747%2CYP_1747 NC_005810.1 Protein Homology CDS 1935341 1936231 . - 0 ID=cds1764;Parent=gene1811;Dbxref=Genbank:WP_002210832.1;Name=WP_002210832.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NC_005810.1 RefSeq gene 1936272 1937939 . - . ID=gene1812;Name=YP_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09100;old_locus_tag=YP1748%2CYP_1748 NC_005810.1 Protein Homology CDS 1936272 1937939 . - 0 ID=cds1765;Parent=gene1812;Dbxref=Genbank:WP_002210831.1;Name=WP_002210831.1;gbkey=CDS;product=pectate disaccharide-lyase;protein_id=WP_002210831.1;transl_table=11 NC_005810.1 RefSeq gene 1938275 1939036 . - . ID=gene1813;Name=YP_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09105;old_locus_tag=YP1749%2CYP_1749 NC_005810.1 Protein Homology CDS 1938275 1939036 . - 0 ID=cds1766;Parent=gene1813;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11 NC_005810.1 RefSeq gene 1939128 1939964 . - . ID=gene1814;Name=YP_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09110;old_locus_tag=YP1750%2CYP_1750 NC_005810.1 Protein Homology CDS 1939128 1939964 . - 0 ID=cds1767;Parent=gene1814;Dbxref=Genbank:WP_002210829.1;Name=WP_002210829.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_002210829.1;transl_table=11 NC_005810.1 RefSeq gene 1940300 1940650 . + . ID=gene1815;Name=YP_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09115;old_locus_tag=YP1751 NC_005810.1 Protein Homology CDS 1940300 1940650 . + 0 ID=cds1768;Parent=gene1815;Dbxref=Genbank:WP_002210828.1;Name=WP_002210828.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_002210828.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1940623 1941943 . + . ID=id349;gbkey=repeat_region NC_005810.1 RefSeq region 1940627 1941941 . + . ID=id350;gbkey=mobile_element NC_005810.1 RefSeq gene 1940698 1941906 . + . ID=gene1816;Name=YP_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09120;old_locus_tag=YP1752%2CYP_1752 NC_005810.1 Protein Homology CDS 1940698 1941906 . + 0 ID=cds1769;Parent=gene1816;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 1942236 1942775 . + . ID=gene1817;Name=YP_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09125;old_locus_tag=YP1753%2CYP_1753 NC_005810.1 Protein Homology CDS 1942236 1942775 . + 0 ID=cds1770;Parent=gene1817;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11 NC_005810.1 RefSeq gene 1943014 1946460 . - . ID=gene1818;Name=YP_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09130;old_locus_tag=YP1754%2CYP_1754 NC_005810.1 Protein Homology CDS 1943014 1946460 . - 0 ID=cds1771;Parent=gene1818;Dbxref=Genbank:WP_002210924.1;Name=WP_002210924.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_002210924.1;transl_table=11 NC_005810.1 RefSeq gene 1946730 1947933 . + . ID=gene1819;Name=YP_RS09135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09135;old_locus_tag=YP1755%2CYP_1755;pseudo=true NC_005810.1 Protein Homology CDS 1946730 1947933 . + 0 ID=cds1772;Parent=gene1819;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=outer membrane-specific lipoprotein transporter subunit LolC;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1947926 1948630 . + . ID=gene1820;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YP_RS09140;old_locus_tag=YP1756%2CYP_1756 NC_005810.1 Protein Homology CDS 1947926 1948630 . + 0 ID=cds1773;Parent=gene1820;Dbxref=Genbank:WP_002210923.1;Name=WP_002210923.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NC_005810.1 RefSeq gene 1948630 1949877 . + . ID=gene1821;Name=YP_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09145;old_locus_tag=YP1757%2CYP_1757 NC_005810.1 Protein Homology CDS 1948630 1949877 . + 0 ID=cds1774;Parent=gene1821;Dbxref=Genbank:WP_002210922.1;Name=WP_002210922.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002210922.1;transl_table=11 NC_005810.1 RefSeq gene 1949896 1950666 . + . ID=gene1822;Name=YP_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09150;old_locus_tag=YP1758%2CYP_1758 NC_005810.1 Protein Homology CDS 1949896 1950666 . + 0 ID=cds1775;Parent=gene1822;Dbxref=Genbank:WP_002216175.1;Name=WP_002216175.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_002216175.1;transl_table=11 NC_005810.1 RefSeq gene 1950860 1951696 . + . ID=gene1823;Name=YP_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09155;old_locus_tag=YP1760%2CYP_1760 NC_005810.1 Protein Homology CDS 1950860 1951696 . + 0 ID=cds1776;Parent=gene1823;Dbxref=Genbank:WP_002210921.1;Name=WP_002210921.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11 NC_005810.1 RefSeq gene 1952026 1953261 . + . ID=gene1824;Name=YP_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09160;old_locus_tag=YP1761%2CYP_1761 NC_005810.1 Protein Homology CDS 1952026 1953261 . + 0 ID=cds1777;Parent=gene1824;Dbxref=Genbank:WP_002210920.1;Name=WP_002210920.1;gbkey=CDS;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1953443 1953474 . + . ID=id351;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1953494 1954615 . - . ID=gene1825;Name=YP_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09165;old_locus_tag=YP1762%2CYP_1762 NC_005810.1 Protein Homology CDS 1953494 1954615 . - 0 ID=cds1778;Parent=gene1825;Dbxref=Genbank:WP_002210919.1;Name=WP_002210919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210919.1;transl_table=11 NC_005810.1 RefSeq gene 1954699 1956153 . - . ID=gene1826;Name=YP_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09170;old_locus_tag=YP1763%2CYP_1763 NC_005810.1 Protein Homology CDS 1954699 1956153 . - 0 ID=cds1779;Parent=gene1826;Dbxref=Genbank:WP_002210918.1;Name=WP_002210918.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_002210918.1;transl_table=11 NC_005810.1 RefSeq gene 1956159 1956830 . - . ID=gene1827;Name=YP_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09175;old_locus_tag=YP1764%2CYP_1764 NC_005810.1 Protein Homology CDS 1956159 1956830 . - 0 ID=cds1780;Parent=gene1827;Dbxref=Genbank:WP_002230788.1;Name=WP_002230788.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002230788.1;transl_table=11 NC_005810.1 RefSeq gene 1957041 1957664 . - . ID=gene1828;Name=YP_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09180;old_locus_tag=YP1765%2CYP_1765 NC_005810.1 Protein Homology CDS 1957041 1957664 . - 0 ID=cds1781;Parent=gene1828;Dbxref=Genbank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210916.1;transl_table=11 NC_005810.1 RefSeq gene 1957852 1959222 . - . ID=gene1829;Name=YP_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09185;old_locus_tag=YP1766%2CYP_1766 NC_005810.1 Protein Homology CDS 1957852 1959222 . - 0 ID=cds1782;Parent=gene1829;Dbxref=Genbank:WP_002230790.1;Name=WP_002230790.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002230790.1;transl_table=11 NC_005810.1 RefSeq gene 1959283 1959909 . - . ID=gene1830;Name=YP_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09190;old_locus_tag=YP1767%2CYP_1767 NC_005810.1 Protein Homology CDS 1959283 1959909 . - 0 ID=cds1783;Parent=gene1830;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11 NC_005810.1 RefSeq gene 1959967 1961082 . - . ID=gene1831;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=YP_RS09195;old_locus_tag=YP1768%2CYP_1768 NC_005810.1 Protein Homology CDS 1959967 1961082 . - 0 ID=cds1784;Parent=gene1831;Dbxref=Genbank:WP_002210913.1;Name=WP_002210913.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_002210913.1;transl_table=11 NC_005810.1 RefSeq gene 1961269 1961715 . - . ID=gene1832;Name=YP_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09200;old_locus_tag=YP1769%2CYP_1769 NC_005810.1 Protein Homology CDS 1961269 1961715 . - 0 ID=cds1785;Parent=gene1832;Dbxref=Genbank:WP_002210912.1;Name=WP_002210912.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210912.1;transl_table=11 NC_005810.1 RefSeq gene 1961708 1962334 . - . ID=gene1833;Name=YP_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09205;old_locus_tag=YP1770%2CYP_1770 NC_005810.1 Protein Homology CDS 1961708 1962334 . - 0 ID=cds1786;Parent=gene1833;Dbxref=Genbank:WP_002218214.1;Name=WP_002218214.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_002218214.1;transl_table=11 NC_005810.1 RefSeq gene 1962465 1963718 . + . ID=gene1834;Name=YP_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09210;old_locus_tag=YP1771%2CYP_1771 NC_005810.1 Protein Homology CDS 1962465 1963718 . + 0 ID=cds1787;Parent=gene1834;Dbxref=Genbank:WP_002210910.1;Name=WP_002210910.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NC_005810.1 RefSeq gene 1963864 1964907 . - . ID=gene1835;Name=YP_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09215;old_locus_tag=YP1772%2CYP_1772 NC_005810.1 Protein Homology CDS 1963864 1964907 . - 0 ID=cds1788;Parent=gene1835;Dbxref=Genbank:WP_002210909.1;Name=WP_002210909.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_002210909.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1965119 1965166 . + . ID=id352;Note=degenerate repeat region containing 3 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1965183 1965443 . - . ID=gene1836;Name=YP_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09220;old_locus_tag=YP1773%2CYP_1773 NC_005810.1 Protein Homology CDS 1965183 1965443 . - 0 ID=cds1789;Parent=gene1836;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NC_005810.1 RefSeq gene 1965563 1967143 . - . ID=gene1837;Name=YP_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09225;old_locus_tag=YP1774%2CYP_1774 NC_005810.1 Protein Homology CDS 1965563 1967143 . - 0 ID=cds1790;Parent=gene1837;Dbxref=Genbank:WP_002210907.1;Name=WP_002210907.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210907.1;transl_table=11 NC_005810.1 RefSeq gene 1968063 1968920 . - . ID=gene1838;Name=YP_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09230;old_locus_tag=YP1775%2CYP_1775 NC_005810.1 Protein Homology CDS 1968063 1968920 . - 0 ID=cds1791;Parent=gene1838;Dbxref=Genbank:WP_002210906.1;Name=WP_002210906.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210906.1;transl_table=11 NC_005810.1 RefSeq gene 1969080 1969463 . + . ID=gene1839;Name=YP_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09235;old_locus_tag=YP1776 NC_005810.1 Protein Homology CDS 1969080 1969463 . + 0 ID=cds1792;Parent=gene1839;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NC_005810.1 RefSeq gene 1969521 1969694 . + . ID=gene1840;Name=YP_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09240;old_locus_tag=YP1777%2CYP_1777 NC_005810.1 Protein Homology CDS 1969521 1969694 . + 0 ID=cds1793;Parent=gene1840;Dbxref=Genbank:WP_002210904.1;Name=WP_002210904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210904.1;transl_table=11 NC_005810.1 RefSeq gene 1969995 1971320 . + . ID=gene1841;Name=YP_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09245;old_locus_tag=YP1778%2CYP_1778 NC_005810.1 Protein Homology CDS 1969995 1971320 . + 0 ID=cds1794;Parent=gene1841;Dbxref=Genbank:WP_002210903.1;Name=WP_002210903.1;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=WP_002210903.1;transl_table=11 NC_005810.1 RefSeq gene 1971622 1971825 . - . ID=gene1842;Name=YP_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09250;old_locus_tag=YP1779%2CYP_1779 NC_005810.1 Protein Homology CDS 1971622 1971825 . - 0 ID=cds1795;Parent=gene1842;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11 NC_005810.1 RefSeq gene 1972128 1973027 . - . ID=gene1843;Name=YP_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09255;old_locus_tag=YP1780%2CYP_1780 NC_005810.1 Protein Homology CDS 1972128 1973027 . - 0 ID=cds1796;Parent=gene1843;Dbxref=Genbank:WP_002210901.1;Name=WP_002210901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210901.1;transl_table=11 NC_005810.1 RefSeq gene 1973119 1973568 . - . ID=gene1844;Name=YP_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09260;old_locus_tag=YP1781%2CYP_1781 NC_005810.1 Protein Homology CDS 1973119 1973568 . - 0 ID=cds1797;Parent=gene1844;Dbxref=Genbank:WP_002210900.1;Name=WP_002210900.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1973915 1973974 . + . ID=id353;Note=degenerate repeat region containing 4 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1973931 1973990 . + . ID=id354;Note=degenerate repeat region containing 2 copies of a 30bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1974081 1974614 . - . ID=gene1845;Name=YP_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09265;old_locus_tag=YP1783%2CYP_1783 NC_005810.1 Protein Homology CDS 1974081 1974614 . - 0 ID=cds1798;Parent=gene1845;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11 NC_005810.1 RefSeq gene 1974897 1975907 . - . ID=gene1846;Name=YP_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09270;old_locus_tag=YP1784%2CYP_1784 NC_005810.1 Protein Homology CDS 1974897 1975907 . - 0 ID=cds1799;Parent=gene1846;Dbxref=Genbank:WP_002210897.1;Name=WP_002210897.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_002210897.1;transl_table=11 NC_005810.1 RefSeq gene 1976314 1979496 . - . ID=gene1847;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YP_RS09275;old_locus_tag=YP1785%2CYP_1785 NC_005810.1 Protein Homology CDS 1976314 1979496 . - 0 ID=cds1800;Parent=gene1847;Dbxref=Genbank:WP_002214048.1;Name=WP_002214048.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_002214048.1;transl_table=11 NC_005810.1 cmsearch region 1979856 1980298 . + . ID=id355;Note=cspA;gbkey=misc_feature NC_005810.1 RefSeq gene 1980037 1980249 . + . ID=gene1848;Name=YP_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09280;old_locus_tag=YP1786%2CYP_1786 NC_005810.1 Protein Homology CDS 1980037 1980249 . + 0 ID=cds1801;Parent=gene1848;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11 NC_005810.1 RefSeq gene 1980464 1980655 . + . ID=gene1849;Name=YP_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09285;old_locus_tag=YP1787%2CYP_1787 NC_005810.1 Protein Homology CDS 1980464 1980655 . + 0 ID=cds1802;Parent=gene1849;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NC_005810.1 RefSeq gene 1980838 1982539 . - . ID=gene1850;Name=YP_RS09290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09290;old_locus_tag=YP1788;pseudo=true NC_005810.1 Protein Homology CDS 1980838 1982539 . - 0 ID=cds1803;Parent=gene1850;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chemotaxis protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1983176 1983346 . + . ID=gene1851;Name=YP_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09295;old_locus_tag=YP1789%2CYP_1789 NC_005810.1 Protein Homology CDS 1983176 1983346 . + 0 ID=cds1804;Parent=gene1851;Dbxref=Genbank:WP_002214053.1;Name=WP_002214053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214053.1;transl_table=11 NC_005810.1 RefSeq gene 1983698 1984396 . + . ID=gene1852;Name=YP_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09300;old_locus_tag=YP1790%2CYP_1790 NC_005810.1 Protein Homology CDS 1983698 1984396 . + 0 ID=cds1805;Parent=gene1852;Dbxref=Genbank:WP_041175915.1;Name=WP_041175915.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175915.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1984415 1984446 . + . ID=id356;Note=exact repeat region containing 2 copies of a 16 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1984797 1987496 . + . ID=gene1853;Name=YP_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09305;old_locus_tag=YP1791%2CYP_1791 NC_005810.1 Protein Homology CDS 1984797 1987496 . + 0 ID=cds1806;Parent=gene1853;Dbxref=Genbank:WP_002210890.1;Name=WP_002210890.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_002210890.1;transl_table=11 NC_005810.1 RefSeq gene 1988684 1989035 . + . ID=gene1854;Name=YP_RS09310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09310;old_locus_tag=YP1792;pseudo=true NC_005810.1 Protein Homology CDS 1988684 1989035 . + 0 ID=cds1807;Parent=gene1854;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 1989039 1989620 . + . ID=gene1855;Name=YP_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09315;old_locus_tag=YP1793%2CYP_1793 NC_005810.1 Protein Homology CDS 1989039 1989620 . + 0 ID=cds1808;Parent=gene1855;Dbxref=Genbank:WP_002210889.1;Name=WP_002210889.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210889.1;transl_table=11 NC_005810.1 RefSeq gene 1989825 1990712 . + . ID=gene1856;Name=YP_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09320;old_locus_tag=YP1794%2CYP_1794 NC_005810.1 Protein Homology CDS 1989825 1990712 . + 0 ID=cds1809;Parent=gene1856;Dbxref=Genbank:WP_002210888.1;Name=WP_002210888.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_002210888.1;transl_table=11 NC_005810.1 RefSeq gene 1990709 1991656 . + . ID=gene1857;Name=YP_RS09325;end_range=1991656,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09325;old_locus_tag=YP1795;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 1990709 1991656 . + 0 ID=cds1810;Parent=gene1857;end_range=1991656,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 1991613 1991684 . + . ID=id357;Note=degenerate repeat region containing 2 copies of a 36bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1992027 1994192 . + . ID=gene1858;Name=YP_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09330;old_locus_tag=YP1796%2CYP_1796 NC_005810.1 Protein Homology CDS 1992027 1994192 . + 0 ID=cds1811;Parent=gene1858;Dbxref=Genbank:WP_002210886.1;Name=WP_002210886.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_002210886.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1992413 1992448 . + . ID=id358;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 1992888 1992911 . + . ID=id359;Note=exact repeat region containing 2 copies of a 12 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 1994355 1994852 . + . ID=gene1859;Name=YP_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09335;old_locus_tag=YP1797%2CYP_1797 NC_005810.1 Protein Homology CDS 1994355 1994852 . + 0 ID=cds1812;Parent=gene1859;Dbxref=Genbank:WP_002210885.1;Name=WP_002210885.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_002210885.1;transl_table=11 NC_005810.1 RefSeq gene 1995144 1996379 . - . ID=gene1860;Name=YP_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09340;old_locus_tag=YP1798%2CYP_1798 NC_005810.1 Protein Homology CDS 1995144 1996379 . - 0 ID=cds1813;Parent=gene1860;Dbxref=Genbank:WP_002210884.1;Name=WP_002210884.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210884.1;transl_table=11 NC_005810.1 RefSeq gene 1996392 1996769 . - . ID=gene1861;Name=YP_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09345;old_locus_tag=YP1799%2CYP_1799 NC_005810.1 Protein Homology CDS 1996392 1996769 . - 0 ID=cds1814;Parent=gene1861;Dbxref=Genbank:WP_002210883.1;Name=WP_002210883.1;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_002210883.1;transl_table=11 NC_005810.1 RefSeq gene 1996766 1997752 . - . ID=gene1862;Name=YP_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09350;old_locus_tag=YP1800%2CYP_1800 NC_005810.1 Protein Homology CDS 1996766 1997752 . - 0 ID=cds1815;Parent=gene1862;Dbxref=Genbank:WP_002210882.1;Name=WP_002210882.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210882.1;transl_table=11 NC_005810.1 RefSeq gene 1997942 1998607 . + . ID=gene1863;Name=YP_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09355;old_locus_tag=YP1801%2CYP_1801 NC_005810.1 Protein Homology CDS 1997942 1998607 . + 0 ID=cds1816;Parent=gene1863;Dbxref=Genbank:WP_002210881.1;Name=WP_002210881.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210881.1;transl_table=11 NC_005810.1 RefSeq repeat_region 1998735 2000053 . + . ID=id360;gbkey=repeat_region NC_005810.1 RefSeq region 1998737 2000051 . + . ID=id361;gbkey=mobile_element NC_005810.1 RefSeq gene 1998808 2000016 . + . ID=gene1864;Name=YP_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09360;old_locus_tag=YP1802%2CYP_1802 NC_005810.1 Protein Homology CDS 1998808 2000016 . + 0 ID=cds1817;Parent=gene1864;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2000405 2004211 . + . ID=gene1865;Name=YP_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09365;old_locus_tag=YP1803%2CYP_1803 NC_005810.1 Protein Homology CDS 2000405 2004211 . + 0 ID=cds1818;Parent=gene1865;Dbxref=Genbank:WP_002224033.1;Name=WP_002224033.1;gbkey=CDS;product=autotransporter;protein_id=WP_002224033.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2002081 2004211 . + . ID=id362;gbkey=repeat_region NC_005810.1 RefSeq gene 2004739 2007615 . + . ID=gene1866;Name=YP_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09370;old_locus_tag=YP1804%2CYP_1804 NC_005810.1 Protein Homology CDS 2004739 2007615 . + 0 ID=cds1819;Parent=gene1866;Dbxref=Genbank:WP_002210878.1;Name=WP_002210878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210878.1;transl_table=11 NC_005810.1 RefSeq gene 2007684 2008385 . + . ID=gene1867;Name=YP_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09375;old_locus_tag=YP1805%2CYP_1805 NC_005810.1 Protein Homology CDS 2007684 2008385 . + 0 ID=cds1820;Parent=gene1867;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2007695 2007730 . + . ID=id363;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2008626 2010299 . + . ID=gene1868;Name=YP_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09380;old_locus_tag=YP1806%2CYP_1806 NC_005810.1 Protein Homology CDS 2008626 2010299 . + 0 ID=cds1821;Parent=gene1868;Dbxref=Genbank:WP_002210876.1;Name=WP_002210876.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210876.1;transl_table=11 NC_005810.1 RefSeq gene 2010483 2012093 . + . ID=gene1869;Name=YP_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09385;old_locus_tag=YP1807%2CYP_1807 NC_005810.1 Protein Homology CDS 2010483 2012093 . + 0 ID=cds1822;Parent=gene1869;Dbxref=Genbank:WP_002220817.1;Name=WP_002220817.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002220817.1;transl_table=11 NC_005810.1 RefSeq gene 2012266 2013138 . + . ID=gene1870;Name=YP_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09390;old_locus_tag=YP1808%2CYP_1808 NC_005810.1 Protein Homology CDS 2012266 2013138 . + 0 ID=cds1823;Parent=gene1870;Dbxref=Genbank:WP_002214065.1;Name=WP_002214065.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_002214065.1;transl_table=11 NC_005810.1 RefSeq gene 2013138 2014187 . + . ID=gene1871;Name=YP_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09395;old_locus_tag=YP1809%2CYP_1809 NC_005810.1 Protein Homology CDS 2013138 2014187 . + 0 ID=cds1824;Parent=gene1871;Dbxref=Genbank:WP_002210874.1;Name=WP_002210874.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_002210874.1;transl_table=11 NC_005810.1 RefSeq gene 2014288 2014677 . + . ID=gene1872;Name=YP_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09400;old_locus_tag=YP1810%2CYP_1810 NC_005810.1 Protein Homology CDS 2014288 2014677 . + 0 ID=cds1825;Parent=gene1872;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11 NC_005810.1 RefSeq gene 2014687 2015331 . + . ID=gene1873;Name=YP_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09405;old_locus_tag=YP1811%2CYP_1811 NC_005810.1 Protein Homology CDS 2014687 2015331 . + 0 ID=cds1826;Parent=gene1873;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NC_005810.1 RefSeq gene 2015651 2015770 . - . ID=gene1874;Name=YP_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09410 NC_005810.1 Protein Homology CDS 2015651 2015770 . - 0 ID=cds1827;Parent=gene1874;Dbxref=Genbank:WP_002210871.1;Name=WP_002210871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210871.1;transl_table=11 NC_005810.1 RefSeq gene 2015902 2016666 . + . ID=gene1875;Name=YP_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09415;old_locus_tag=YP1812%2CYP_1812 NC_005810.1 Protein Homology CDS 2015902 2016666 . + 0 ID=cds1828;Parent=gene1875;Dbxref=Genbank:WP_002210870.1;Name=WP_002210870.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210870.1;transl_table=11 NC_005810.1 RefSeq gene 2017140 2019233 . + . ID=gene1876;Name=YP_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09420;old_locus_tag=YP1813 NC_005810.1 Protein Homology CDS 2017140 2019233 . + 0 ID=cds1829;Parent=gene1876;Dbxref=Genbank:WP_002377800.1;Name=WP_002377800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002377800.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2017779 2018732 . + . ID=id364;Note=degenerate repeat region containing 2 copies of a 477bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2019220 2019654 . + . ID=gene1877;Name=YP_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09425 NC_005810.1 Protein Homology CDS 2019220 2019654 . + 0 ID=cds1830;Parent=gene1877;Dbxref=Genbank:WP_002215939.1;Name=WP_002215939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215939.1;transl_table=11 NC_005810.1 RefSeq gene 2019754 2020707 . + . ID=gene1878;Name=YP_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09430;old_locus_tag=YP1814%2CYP_1814 NC_005810.1 Protein Homology CDS 2019754 2020707 . + 0 ID=cds1831;Parent=gene1878;Dbxref=Genbank:WP_002210869.1;Name=WP_002210869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210869.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2021023 2022342 . + . ID=id365;gbkey=repeat_region NC_005810.1 RefSeq region 2021026 2022340 . - . ID=id366;gbkey=mobile_element NC_005810.1 RefSeq gene 2021061 2022269 . - . ID=gene1879;Name=YP_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09435;old_locus_tag=YP1815%2CYP_1815 NC_005810.1 Protein Homology CDS 2021061 2022269 . - 0 ID=cds1832;Parent=gene1879;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2022324 2022989 . - . ID=gene1880;Name=YP_RS09440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09440;old_locus_tag=YP1816;partial=true;pseudo=true;start_range=.,2022324 NC_005810.1 Protein Homology CDS 2022324 2022989 . - 0 ID=cds1833;Parent=gene1880;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=alanine racemase;pseudo=true;start_range=.,2022324;transl_table=11 NC_005810.1 RefSeq gene 2023380 2023574 . - . ID=gene1881;Name=YP_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09445;old_locus_tag=YP1817%2CYP_1817 NC_005810.1 Protein Homology CDS 2023380 2023574 . - 0 ID=cds1834;Parent=gene1881;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2023630 2023661 . + . ID=id367;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2024125 2024373 . + . ID=gene1882;Name=YP_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09450;old_locus_tag=YP1818%2CYP_1818 NC_005810.1 Protein Homology CDS 2024125 2024373 . + 0 ID=cds1835;Parent=gene1882;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NC_005810.1 RefSeq gene 2024766 2026022 . + . ID=gene1883;Name=YP_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09455;old_locus_tag=YP1819%2CYP_1819 NC_005810.1 Protein Homology CDS 2024766 2026022 . + 0 ID=cds1836;Parent=gene1883;Dbxref=Genbank:WP_002210864.1;Name=WP_002210864.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210864.1;transl_table=11 NC_005810.1 RefSeq gene 2026177 2026410 . + . ID=gene1884;Name=YP_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09460;old_locus_tag=YP1820%2CYP_1820 NC_005810.1 Protein Homology CDS 2026177 2026410 . + 0 ID=cds1837;Parent=gene1884;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2026495 2026514 . + . ID=id368;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2026884 2028843 . + . ID=id369;gbkey=repeat_region NC_005810.1 RefSeq region 2026888 2028840 . - . ID=id370;gbkey=mobile_element NC_005810.1 RefSeq gene 2026953 2027732 . - . ID=gene1885;Name=YP_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09465;old_locus_tag=YP1821%2CYP_1821 NC_005810.1 Protein Homology CDS 2026953 2027732 . - 0 ID=cds1838;Parent=gene1885;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 2027732 2028754 . - . ID=gene1886;Name=YP_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09470;old_locus_tag=YP1822%2CYP_1822 NC_005810.1 Protein Homology CDS 2027732 2028754 . - 0 ID=cds1839;Parent=gene1886;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 2028837 2029268 . - . ID=gene1887;Name=YP_RS09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09475;old_locus_tag=YP1823;partial=true;pseudo=true;start_range=.,2028837 NC_005810.1 Protein Homology CDS 2028837 2029268 . - 0 ID=cds1840;Parent=gene1887;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,2028837;transl_table=11 NC_005810.1 RefSeq gene 2029416 2030786 . + . ID=gene1888;Name=YP_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09480;old_locus_tag=YP1824%2CYP_1824 NC_005810.1 Protein Homology CDS 2029416 2030786 . + 0 ID=cds1841;Parent=gene1888;Dbxref=Genbank:WP_002211279.1;Name=WP_002211279.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_002211279.1;transl_table=11 NC_005810.1 RefSeq gene 2030786 2031358 . + . ID=gene1889;Name=YP_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09485;old_locus_tag=YP1825%2CYP_1825 NC_005810.1 Protein Homology CDS 2030786 2031358 . + 0 ID=cds1842;Parent=gene1889;Dbxref=Genbank:WP_002211278.1;Name=WP_002211278.1;gbkey=CDS;product=cold inducible protein Ves;protein_id=WP_002211278.1;transl_table=11 NC_005810.1 RefSeq gene 2031536 2033140 . - . ID=gene1890;Name=YP_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09490;old_locus_tag=YP1826%2CYP_1826 NC_005810.1 Protein Homology CDS 2031536 2033140 . - 0 ID=cds1843;Parent=gene1890;Dbxref=Genbank:WP_002211277.1;Name=WP_002211277.1;gbkey=CDS;product=chorismate-binding enzyme domain protein;protein_id=WP_002211277.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2033421 2033444 . + . ID=id371;gbkey=repeat_region NC_005810.1 RefSeq gene 2034149 2034658 . + . ID=gene1891;Name=YP_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09495 NC_005810.1 Protein Homology CDS 2034149 2034658 . + 0 ID=cds1844;Parent=gene1891;Dbxref=Genbank:WP_002214339.1;Name=WP_002214339.1;gbkey=CDS;product=thiolase;protein_id=WP_002214339.1;transl_table=11 NC_005810.1 RefSeq gene 2034627 2035157 . + . ID=gene1892;Name=YP_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09500 NC_005810.1 Protein Homology CDS 2034627 2035157 . + 0 ID=cds1845;Parent=gene1892;Dbxref=Genbank:WP_002214337.1;Name=WP_002214337.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002214337.1;transl_table=11 NC_005810.1 RefSeq gene 2035171 2036187 . + . ID=gene1893;Name=YP_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09505;old_locus_tag=YP1828%2CYP_1828 NC_005810.1 Protein Homology CDS 2035171 2036187 . + 0 ID=cds1846;Parent=gene1893;Dbxref=Genbank:WP_002211275.1;Name=WP_002211275.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211275.1;transl_table=11 NC_005810.1 RefSeq gene 2036180 2036986 . + . ID=gene1894;Name=YP_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09510;old_locus_tag=YP1829%2CYP_1829 NC_005810.1 Protein Homology CDS 2036180 2036986 . + 0 ID=cds1847;Parent=gene1894;Dbxref=Genbank:WP_002214335.1;Name=WP_002214335.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002214335.1;transl_table=11 NC_005810.1 RefSeq gene 2036983 2038269 . + . ID=gene1895;Name=YP_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09515;old_locus_tag=YP1830%2CYP_1830 NC_005810.1 Protein Homology CDS 2036983 2038269 . + 0 ID=cds1848;Parent=gene1895;Dbxref=Genbank:WP_002211273.1;Name=WP_002211273.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_002211273.1;transl_table=11 NC_005810.1 RefSeq gene 2038403 2039008 . + . ID=gene1896;Name=YP_RS09520;end_range=2039008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09520;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 2038403 2039008 . + 0 ID=cds1849;Parent=gene1896;end_range=2039008,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=NAD(P)H steroid dehydrogenase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2039045 2040199 . + . ID=gene1897;Name=YP_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09525 NC_005810.1 Protein Homology CDS 2039045 2040199 . + 0 ID=cds1850;Parent=gene1897;Dbxref=Genbank:WP_002214329.1;Name=WP_002214329.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002214329.1;transl_table=11 NC_005810.1 RefSeq gene 2040196 2040780 . + . ID=gene1898;Name=YP_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09530;old_locus_tag=YP1832%2CYP_1832 NC_005810.1 Protein Homology CDS 2040196 2040780 . + 0 ID=cds1851;Parent=gene1898;Dbxref=Genbank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11 NC_005810.1 RefSeq gene 2040777 2041760 . + . ID=gene1899;Name=YP_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09535;old_locus_tag=YP1833 NC_005810.1 Protein Homology CDS 2040777 2041760 . + 0 ID=cds1852;Parent=gene1899;Dbxref=Genbank:WP_002230808.1;Name=WP_002230808.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002230808.1;transl_table=11 NC_005810.1 RefSeq gene 2041714 2042283 . - . ID=gene1900;Name=YP_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09540;old_locus_tag=YP1834%2CYP_1834 NC_005810.1 Protein Homology CDS 2041714 2042283 . - 0 ID=cds1853;Parent=gene1900;Dbxref=Genbank:WP_002230809.1;Name=WP_002230809.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230809.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2042329 2043646 . + . ID=id372;gbkey=repeat_region NC_005810.1 RefSeq region 2042331 2043645 . + . ID=id373;gbkey=mobile_element NC_005810.1 RefSeq gene 2042402 2043610 . + . ID=gene1901;Name=YP_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09545;old_locus_tag=YP1835%2CYP_1835 NC_005810.1 Protein Homology CDS 2042402 2043610 . + 0 ID=cds1854;Parent=gene1901;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2043730 2045892 . - . ID=gene1902;Name=YP_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09550;old_locus_tag=YP1836%2CYP_1836 NC_005810.1 Protein Homology CDS 2043730 2045892 . - 0 ID=cds1855;Parent=gene1902;Dbxref=Genbank:WP_002230862.1;Name=WP_002230862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230862.1;transl_table=11 NC_005810.1 RefSeq gene 2046471 2048582 . + . ID=gene1903;Name=YP_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09555;old_locus_tag=YP1837%2CYP_1837 NC_005810.1 Protein Homology CDS 2046471 2048582 . + 0 ID=cds1856;Parent=gene1903;Dbxref=Genbank:WP_002224461.1;Name=WP_002224461.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224461.1;transl_table=11 NC_005810.1 RefSeq gene 2048585 2048773 . - . ID=gene1904;Name=YP_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09560 NC_005810.1 Protein Homology CDS 2048585 2048773 . - 0 ID=cds1857;Parent=gene1904;Dbxref=Genbank:WP_002211264.1;Name=WP_002211264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211264.1;transl_table=11 NC_005810.1 RefSeq gene 2048829 2049467 . + . ID=gene1905;Name=YP_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09565;old_locus_tag=YP1838%2CYP_1838 NC_005810.1 Protein Homology CDS 2048829 2049467 . + 0 ID=cds1858;Parent=gene1905;Dbxref=Genbank:WP_002211263.1;Name=WP_002211263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211263.1;transl_table=11 NC_005810.1 RefSeq gene 2049602 2050261 . - . ID=gene1906;Name=YP_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09570;old_locus_tag=YP1839%2CYP_1839 NC_005810.1 Protein Homology CDS 2049602 2050261 . - 0 ID=cds1859;Parent=gene1906;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11 NC_005810.1 RefSeq gene 2050366 2051046 . - . ID=gene1907;Name=YP_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09575;old_locus_tag=YP1840%2CYP_1840 NC_005810.1 Protein Homology CDS 2050366 2051046 . - 0 ID=cds1860;Parent=gene1907;Dbxref=Genbank:WP_002211261.1;Name=WP_002211261.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211261.1;transl_table=11 NC_005810.1 RefSeq gene 2051387 2052337 . - . ID=gene1908;Name=YP_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09580;old_locus_tag=YP1841%2CYP_1841 NC_005810.1 Protein Homology CDS 2051387 2052337 . - 0 ID=cds1861;Parent=gene1908;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NC_005810.1 RefSeq gene 2052324 2053256 . - . ID=gene1909;Name=YP_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09585;old_locus_tag=YP1842%2CYP_1842 NC_005810.1 Protein Homology CDS 2052324 2053256 . - 0 ID=cds1862;Parent=gene1909;Dbxref=Genbank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NC_005810.1 RefSeq gene 2053262 2054167 . - . ID=gene1910;Name=YP_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09590;old_locus_tag=YP1843%2CYP_1843 NC_005810.1 Protein Homology CDS 2053262 2054167 . - 0 ID=cds1863;Parent=gene1910;Dbxref=Genbank:WP_002211258.1;Name=WP_002211258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211258.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2054228 2054259 . + . ID=id374;Note=exact repeat region containing 2 copies of a 16 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2054958 2056031 . - . ID=gene1911;Name=YP_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09595;old_locus_tag=YP1844%2CYP_1844 NC_005810.1 Protein Homology CDS 2054958 2056031 . - 0 ID=cds1864;Parent=gene1911;Dbxref=Genbank:WP_002211257.1;Name=WP_002211257.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11 NC_005810.1 RefSeq gene 2056244 2056714 . - . ID=gene1912;Name=YP_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09600;old_locus_tag=YP1845%2CYP_1845 NC_005810.1 Protein Homology CDS 2056244 2056714 . - 0 ID=cds1865;Parent=gene1912;Dbxref=Genbank:WP_002211256.1;Name=WP_002211256.1;gbkey=CDS;product=cupin;protein_id=WP_002211256.1;transl_table=11 NC_005810.1 RefSeq gene 2056769 2057191 . - . ID=gene1913;Name=YP_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09605;old_locus_tag=YP1846%2CYP_1846 NC_005810.1 Protein Homology CDS 2056769 2057191 . - 0 ID=cds1866;Parent=gene1913;Dbxref=Genbank:WP_002211255.1;Name=WP_002211255.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002211255.1;transl_table=11 NC_005810.1 RefSeq gene 2057468 2058853 . - . ID=gene1914;Name=YP_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09610;old_locus_tag=YP1847%2CYP_1847 NC_005810.1 Protein Homology CDS 2057468 2058853 . - 0 ID=cds1867;Parent=gene1914;Dbxref=Genbank:WP_002211254.1;Name=WP_002211254.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11 NC_005810.1 RefSeq gene 2058865 2059557 . - . ID=gene1915;Name=YP_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09615;old_locus_tag=YP1848%2CYP_1848 NC_005810.1 Protein Homology CDS 2058865 2059557 . - 0 ID=cds1868;Parent=gene1915;Dbxref=Genbank:WP_002211253.1;Name=WP_002211253.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211253.1;transl_table=11 NC_005810.1 RefSeq gene 2059822 2060913 . + . ID=gene1916;Name=YP_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09620;old_locus_tag=YP1849%2CYP_1849 NC_005810.1 Protein Homology CDS 2059822 2060913 . + 0 ID=cds1869;Parent=gene1916;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2059836 2059871 . + . ID=id375;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2061104 2061769 . + . ID=gene1917;Name=YP_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09625;old_locus_tag=YP1850%2CYP_1850 NC_005810.1 Protein Homology CDS 2061104 2061769 . + 0 ID=cds1870;Parent=gene1917;Dbxref=Genbank:WP_002211251.1;Name=WP_002211251.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11 NC_005810.1 RefSeq gene 2061784 2062479 . + . ID=gene1918;Name=YP_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09630;old_locus_tag=YP1851%2CYP_1851 NC_005810.1 Protein Homology CDS 2061784 2062479 . + 0 ID=cds1871;Parent=gene1918;Dbxref=Genbank:WP_002211250.1;Name=WP_002211250.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211250.1;transl_table=11 NC_005810.1 RefSeq gene 2062687 2063529 . - . ID=gene1919;Name=YP_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09635;old_locus_tag=YP1852%2CYP_1852 NC_005810.1 Protein Homology CDS 2062687 2063529 . - 0 ID=cds1872;Parent=gene1919;Dbxref=Genbank:WP_002211249.1;Name=WP_002211249.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211249.1;transl_table=11 NC_005810.1 RefSeq gene 2064160 2064816 . + . ID=gene1920;Name=YP_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09640;old_locus_tag=YP1853%2CYP_1853 NC_005810.1 Protein Homology CDS 2064160 2064816 . + 0 ID=cds1873;Parent=gene1920;Dbxref=Genbank:WP_002216887.1;Name=WP_002216887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216887.1;transl_table=11 NC_005810.1 RefSeq gene 2064813 2065643 . + . ID=gene1921;Name=YP_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09645;old_locus_tag=YP1854%2CYP_1854 NC_005810.1 Protein Homology CDS 2064813 2065643 . + 0 ID=cds1874;Parent=gene1921;Dbxref=Genbank:WP_002211248.1;Name=WP_002211248.1;gbkey=CDS;product=esterase;protein_id=WP_002211248.1;transl_table=11 NC_005810.1 RefSeq gene 2065651 2066049 . + . ID=gene1922;Name=YP_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09650;old_locus_tag=YP1855%2CYP_1855 NC_005810.1 Protein Homology CDS 2065651 2066049 . + 0 ID=cds1875;Parent=gene1922;Dbxref=Genbank:WP_002211247.1;Name=WP_002211247.1;gbkey=CDS;product=rhodanese;protein_id=WP_002211247.1;transl_table=11 NC_005810.1 RefSeq gene 2066097 2066606 . - . ID=gene1923;Name=YP_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09655;old_locus_tag=YP1856%2CYP_1856 NC_005810.1 Protein Homology CDS 2066097 2066606 . - 0 ID=cds1876;Parent=gene1923;Dbxref=Genbank:WP_002211246.1;Name=WP_002211246.1;gbkey=CDS;product=integrase;protein_id=WP_002211246.1;transl_table=11 NC_005810.1 RefSeq gene 2066624 2067022 . - . ID=gene1924;Name=YP_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09660;old_locus_tag=YP1857%2CYP_1857 NC_005810.1 Protein Homology CDS 2066624 2067022 . - 0 ID=cds1877;Parent=gene1924;Dbxref=Genbank:WP_011906219.1;Name=WP_011906219.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011906219.1;transl_table=11 NC_005810.1 RefSeq gene 2067235 2068326 . - . ID=gene1925;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YP_RS09665;old_locus_tag=YP1858%2CYP_1858 NC_005810.1 Protein Homology CDS 2067235 2068326 . - 0 ID=cds1878;Parent=gene1925;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11 NC_005810.1 RefSeq gene 2068490 2069080 . - . ID=gene1926;Name=YP_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09670;old_locus_tag=YP1859%2CYP_1859 NC_005810.1 Protein Homology CDS 2068490 2069080 . - 0 ID=cds1879;Parent=gene1926;Dbxref=Genbank:WP_002218168.1;Name=WP_002218168.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_002218168.1;transl_table=11 NC_005810.1 RefSeq gene 2069442 2069714 . + . ID=gene1927;Name=YP_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09675;old_locus_tag=YP1860%2CYP_1860 NC_005810.1 Protein Homology CDS 2069442 2069714 . + 0 ID=cds1880;Parent=gene1927;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11 NC_005810.1 RefSeq gene 2069705 2069818 . - . ID=gene1928;Name=YP_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09680 NC_005810.1 Protein Homology CDS 2069705 2069818 . - 0 ID=cds1881;Parent=gene1928;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11 NC_005810.1 RefSeq gene 2069916 2070863 . - . ID=gene1929;Name=YP_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09685;old_locus_tag=YP1861%2CYP_1861 NC_005810.1 Protein Homology CDS 2069916 2070863 . - 0 ID=cds1882;Parent=gene1929;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11 NC_005810.1 RefSeq gene 2070913 2071023 . - . ID=gene1930;Name=YP_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09690 NC_005810.1 Protein Homology CDS 2070913 2071023 . - 0 ID=cds1883;Parent=gene1930;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11 NC_005810.1 RefSeq gene 2071204 2072103 . - . ID=gene1931;Name=YP_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09695;old_locus_tag=YP1862%2CYP_1862 NC_005810.1 Protein Homology CDS 2071204 2072103 . - 0 ID=cds1884;Parent=gene1931;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NC_005810.1 RefSeq gene 2072105 2072728 . - . ID=gene1932;Name=YP_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09700;old_locus_tag=YP1863%2CYP_1863 NC_005810.1 Protein Homology CDS 2072105 2072728 . - 0 ID=cds1885;Parent=gene1932;Dbxref=Genbank:WP_002224468.1;Name=WP_002224468.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_002224468.1;transl_table=11 NC_005810.1 RefSeq gene 2073034 2074305 . + . ID=gene1933;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YP_RS09705;old_locus_tag=YP1864%2CYP_1864 NC_005810.1 Protein Homology CDS 2073034 2074305 . + 0 ID=cds1886;Parent=gene1933;Dbxref=Genbank:WP_011171850.1;Name=WP_011171850.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_011171850.1;transl_table=11 NC_005810.1 RefSeq gene 2074328 2075410 . + . ID=gene1934;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YP_RS09710;old_locus_tag=YP1865%2CYP_1865 NC_005810.1 Protein Homology CDS 2074328 2075410 . + 0 ID=cds1887;Parent=gene1934;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NC_005810.1 RefSeq gene 2075410 2076240 . + . ID=gene1935;Name=YP_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09715;old_locus_tag=YP1866%2CYP_1866 NC_005810.1 Protein Homology CDS 2075410 2076240 . + 0 ID=cds1888;Parent=gene1935;Dbxref=Genbank:WP_002211235.1;Name=WP_002211235.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=release factor glutamine methyltransferase;protein_id=WP_002211235.1;transl_table=11 NC_005810.1 RefSeq gene 2076304 2076705 . + . ID=gene1936;Name=YP_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09720;old_locus_tag=YP1867%2CYP_1867 NC_005810.1 Protein Homology CDS 2076304 2076705 . + 0 ID=cds1889;Parent=gene1936;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11 NC_005810.1 RefSeq gene 2076702 2077511 . + . ID=gene1937;Name=YP_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09725;old_locus_tag=YP1868%2CYP_1868 NC_005810.1 Protein Homology CDS 2076702 2077511 . + 0 ID=cds1890;Parent=gene1937;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11 NC_005810.1 RefSeq gene 2077607 2078461 . + . ID=gene1938;Name=YP_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09730;old_locus_tag=YP1869%2CYP_1869 NC_005810.1 Protein Homology CDS 2077607 2078461 . + 0 ID=cds1891;Parent=gene1938;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2078601 2078774 . + . ID=id376;gbkey=repeat_region NC_005810.1 RefSeq gene 2078815 2080512 . - . ID=gene1939;Name=YP_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09735;old_locus_tag=YP1870%2CYP_1870 NC_005810.1 Protein Homology CDS 2078815 2080512 . - 0 ID=cds1892;Parent=gene1939;Dbxref=Genbank:WP_002224472.1;Name=WP_002224472.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_002224472.1;transl_table=11 NC_005810.1 RefSeq gene 2080751 2081047 . - . ID=gene1940;Name=YP_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09740;old_locus_tag=YP1871%2CYP_1871 NC_005810.1 Protein Homology CDS 2080751 2081047 . - 0 ID=cds1893;Parent=gene1940;Dbxref=Genbank:WP_002217150.1;Name=WP_002217150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217150.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2081240 2081271 . + . ID=id377;Note=degenerate repeat region containing 4 copies of a 8bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2081356 2081445 . - . ID=gene1941;Name=YP_RS09745;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS09745;old_locus_tag=tRNA-Ser_4%2CYP_t36 NC_005810.1 tRNAscan-SE tRNA 2081356 2081445 . - . ID=rna43;Parent=gene1941;anticodon=(pos:complement(2081409..2081411));gbkey=tRNA;product=tRNA-Ser NC_005810.1 tRNAscan-SE exon 2081356 2081445 . - . ID=id378;Parent=rna43;anticodon=(pos:complement(2081409..2081411));gbkey=tRNA;product=tRNA-Ser NC_005810.1 RefSeq gene 2081587 2082462 . - . ID=gene1942;Name=YP_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09750;old_locus_tag=YP1872%2CYP_1872 NC_005810.1 Protein Homology CDS 2081587 2082462 . - 0 ID=cds1894;Parent=gene1942;Dbxref=Genbank:WP_002211229.1;Name=WP_002211229.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211229.1;transl_table=11 NC_005810.1 RefSeq gene 2082763 2083845 . - . ID=gene1943;Name=YP_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09755;old_locus_tag=YP1873%2CYP_1873 NC_005810.1 Protein Homology CDS 2082763 2083845 . - 0 ID=cds1895;Parent=gene1943;Dbxref=Genbank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211228.1;transl_table=11 NC_005810.1 RefSeq gene 2083865 2084701 . - . ID=gene1944;Name=YP_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09760;old_locus_tag=YP1874%2CYP_1874 NC_005810.1 Protein Homology CDS 2083865 2084701 . - 0 ID=cds1896;Parent=gene1944;Dbxref=Genbank:WP_002211227.1;Name=WP_002211227.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NC_005810.1 RefSeq gene 2084698 2085564 . - . ID=gene1945;Name=YP_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09765;old_locus_tag=YP1875%2CYP_1875 NC_005810.1 Protein Homology CDS 2084698 2085564 . - 0 ID=cds1897;Parent=gene1945;Dbxref=Genbank:WP_002211226.1;Name=WP_002211226.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211226.1;transl_table=11 NC_005810.1 RefSeq gene 2085561 2086298 . - . ID=gene1946;Name=YP_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09770 NC_005810.1 Protein Homology CDS 2085561 2086298 . - 0 ID=cds1898;Parent=gene1946;Dbxref=Genbank:WP_002211225.1;Name=WP_002211225.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211225.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2086316 2087033 . + . ID=id379;gbkey=repeat_region NC_005810.1 RefSeq region 2086321 2087031 . + . ID=id380;gbkey=mobile_element NC_005810.1 RefSeq gene 2086466 2086923 . + . ID=gene1947;Name=YP_RS09775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09775;old_locus_tag=YP1877%2CYP_1877;pseudo=true NC_005810.1 Protein Homology CDS 2086466 2086923 . + 0 ID=cds1899;Parent=gene1947;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2087011 2087337 . - . ID=gene1948;Name=YP_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09780 NC_005810.1 Protein Homology CDS 2087011 2087337 . - 0 ID=cds1900;Parent=gene1948;Dbxref=Genbank:WP_002211224.1;Name=WP_002211224.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211224.1;transl_table=11 NC_005810.1 RefSeq gene 2087551 2088381 . + . ID=gene1949;Name=YP_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09785;old_locus_tag=YP1878%2CYP_1878 NC_005810.1 Protein Homology CDS 2087551 2088381 . + 0 ID=cds1901;Parent=gene1949;Dbxref=Genbank:WP_002211223.1;Name=WP_002211223.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11 NC_005810.1 RefSeq gene 2088395 2089507 . + . ID=gene1950;Name=YP_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09790;old_locus_tag=YP1879%2CYP_1879 NC_005810.1 Protein Homology CDS 2088395 2089507 . + 0 ID=cds1902;Parent=gene1950;Dbxref=Genbank:WP_002211222.1;Name=WP_002211222.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NC_005810.1 RefSeq gene 2089764 2089853 . - . ID=gene1951;Name=YP_RS09795;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS09795;old_locus_tag=tRNA-Ser_5%2CYP_t37 NC_005810.1 tRNAscan-SE tRNA 2089764 2089853 . - . ID=rna44;Parent=gene1951;anticodon=(pos:complement(2089817..2089819));gbkey=tRNA;product=tRNA-Ser NC_005810.1 tRNAscan-SE exon 2089764 2089853 . - . ID=id381;Parent=rna44;anticodon=(pos:complement(2089817..2089819));gbkey=tRNA;product=tRNA-Ser NC_005810.1 RefSeq gene 2090142 2090879 . + . ID=gene1952;Name=YP_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09800;old_locus_tag=YP1880%2CYP_1880 NC_005810.1 Protein Homology CDS 2090142 2090879 . + 0 ID=cds1903;Parent=gene1952;Dbxref=Genbank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NC_005810.1 RefSeq gene 2090916 2091476 . + . ID=gene1953;Name=YP_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09805;old_locus_tag=YP1881%2CYP_1881 NC_005810.1 Protein Homology CDS 2090916 2091476 . + 0 ID=cds1904;Parent=gene1953;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2091530 2091868 . + . ID=id382;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2091530 2091843 . + . ID=id383;Note=degenerate repeat region containing 2 copies of a 157bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2091930 2092493 . - . ID=gene1954;Name=YP_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09810;old_locus_tag=YP1882%2CYP_1882 NC_005810.1 Protein Homology CDS 2091930 2092493 . - 0 ID=cds1905;Parent=gene1954;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NC_005810.1 RefSeq gene 2092888 2094093 . - . ID=gene1955;Name=YP_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09815;old_locus_tag=YP1883%2CYP_1883 NC_005810.1 Protein Homology CDS 2092888 2094093 . - 0 ID=cds1906;Parent=gene1955;Dbxref=Genbank:WP_002211217.1;Name=WP_002211217.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_002211217.1;transl_table=11 NC_005810.1 RefSeq gene 2094387 2094971 . + . ID=gene1956;Name=YP_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09820;old_locus_tag=YP1884%2CYP_1884 NC_005810.1 Protein Homology CDS 2094387 2094971 . + 0 ID=cds1907;Parent=gene1956;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2095565 2095594 . + . ID=id384;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2095678 2096589 . + . ID=gene1957;Name=YP_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09825 NC_005810.1 Protein Homology CDS 2095678 2096589 . + 0 ID=cds1908;Parent=gene1957;Dbxref=Genbank:WP_002354211.1;Name=WP_002354211.1;gbkey=CDS;product=virulence factor MviM;protein_id=WP_002354211.1;transl_table=11 NC_005810.1 RefSeq gene 2096856 2098391 . + . ID=gene1958;Name=YP_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09830;old_locus_tag=YP1886%2CYP_1886 NC_005810.1 Protein Homology CDS 2096856 2098391 . + 0 ID=cds1909;Parent=gene1958;Dbxref=Genbank:WP_002211214.1;Name=WP_002211214.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211214.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2098396 2098427 . + . ID=id385;gbkey=repeat_region NC_005810.1 RefSeq gene 2098839 2100500 . + . ID=gene1959;Name=YP_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09835;old_locus_tag=YP1887%2CYP_1887 NC_005810.1 Protein Homology CDS 2098839 2100500 . + 0 ID=cds1910;Parent=gene1959;Dbxref=Genbank:WP_002211213.1;Name=WP_002211213.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002211213.1;transl_table=11 NC_005810.1 RefSeq gene 2100785 2105261 . + . ID=gene1960;Name=YP_RS09840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS09840;old_locus_tag=YP1888;pseudo=true NC_005810.1 Protein Homology CDS 2100785 2105261 . + 0 ID=cds1911;Parent=gene1960;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemolysin;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2105492 2107222 . - . ID=gene1961;Name=YP_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09845;old_locus_tag=YP1889%2CYP_1889 NC_005810.1 Protein Homology CDS 2105492 2107222 . - 0 ID=cds1912;Parent=gene1961;Dbxref=Genbank:WP_002211212.1;Name=WP_002211212.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_002211212.1;transl_table=11 NC_005810.1 RefSeq gene 2107624 2107815 . - . ID=gene1962;Name=YP_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09850 NC_005810.1 Protein Homology CDS 2107624 2107815 . - 0 ID=cds1913;Parent=gene1962;Dbxref=Genbank:WP_002221859.1;Name=WP_002221859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221859.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2107675 2107714 . + . ID=id386;gbkey=repeat_region NC_005810.1 RefSeq gene 2107845 2108420 . + . ID=gene1963;Name=YP_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09855;old_locus_tag=YP1890%2CYP_1890 NC_005810.1 Protein Homology CDS 2107845 2108420 . + 0 ID=cds1914;Parent=gene1963;Dbxref=Genbank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211210.1;transl_table=11 NC_005810.1 RefSeq gene 2108652 2109416 . + . ID=gene1964;Name=YP_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09860;old_locus_tag=YP1891%2CYP_1891 NC_005810.1 Protein Homology CDS 2108652 2109416 . + 0 ID=cds1915;Parent=gene1964;Dbxref=Genbank:WP_002211209.1;Name=WP_002211209.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_002211209.1;transl_table=11 NC_005810.1 RefSeq gene 2109609 2110580 . - . ID=gene1965;Name=YP_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09865;old_locus_tag=YP1892%2CYP_1892 NC_005810.1 Protein Homology CDS 2109609 2110580 . - 0 ID=cds1916;Parent=gene1965;Dbxref=Genbank:WP_002211208.1;Name=WP_002211208.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_002211208.1;transl_table=11 NC_005810.1 RefSeq gene 2110577 2111380 . - . ID=gene1966;Name=YP_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09870;old_locus_tag=YP1893%2CYP_1893 NC_005810.1 Protein Homology CDS 2110577 2111380 . - 0 ID=cds1917;Parent=gene1966;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11 NC_005810.1 RefSeq gene 2111571 2111966 . - . ID=gene1967;Name=YP_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09875;old_locus_tag=YP1894%2CYP_1894 NC_005810.1 Protein Homology CDS 2111571 2111966 . - 0 ID=cds1918;Parent=gene1967;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11 NC_005810.1 RefSeq gene 2112146 2112961 . - . ID=gene1968;Name=YP_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09880;old_locus_tag=YP1895%2CYP_1895 NC_005810.1 Protein Homology CDS 2112146 2112961 . - 0 ID=cds1919;Parent=gene1968;Dbxref=Genbank:WP_002211205.1;Name=WP_002211205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211205.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2112968 2113433 . + . ID=id387;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2112968 2113339 . + . ID=id388;Note=degenerate repeat region containing 3 copies of a 124bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2113830 2113867 . + . ID=id389;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2114019 2115815 . + . ID=gene1969;Name=YP_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09885;old_locus_tag=YP1896%2CYP_1896 NC_005810.1 Protein Homology CDS 2114019 2115815 . + 0 ID=cds1920;Parent=gene1969;Dbxref=Genbank:WP_011171852.1;Name=WP_011171852.1;gbkey=CDS;product=aspartyl-tRNA synthetase;protein_id=WP_011171852.1;transl_table=11 NC_005810.1 RefSeq gene 2115815 2116258 . + . ID=gene1970;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YP_RS09890;old_locus_tag=YP1897%2CYP_1897 NC_005810.1 Protein Homology CDS 2115815 2116258 . + 0 ID=cds1921;Parent=gene1970;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11 NC_005810.1 RefSeq gene 2116316 2117059 . + . ID=gene1971;Name=YP_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09895;old_locus_tag=YP1898%2CYP_1898 NC_005810.1 Protein Homology CDS 2116316 2117059 . + 0 ID=cds1922;Parent=gene1971;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NC_005810.1 RefSeq gene 2117268 2117789 . + . ID=gene1972;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YP_RS09900;old_locus_tag=YP1899%2CYP_1899 NC_005810.1 Protein Homology CDS 2117268 2117789 . + 0 ID=cds1923;Parent=gene1972;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NC_005810.1 RefSeq gene 2118072 2118686 . + . ID=gene1973;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YP_RS09905;old_locus_tag=YP1900%2CYP_1900 NC_005810.1 Protein Homology CDS 2118072 2118686 . + 0 ID=cds1924;Parent=gene1973;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11 NC_005810.1 RefSeq gene 2118848 2119852 . + . ID=gene1974;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YP_RS09910;old_locus_tag=YP1901%2CYP_1901 NC_005810.1 Protein Homology CDS 2118848 2119852 . + 0 ID=cds1925;Parent=gene1974;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NC_005810.1 RefSeq gene 2119907 2120692 . - . ID=gene1975;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=YP_RS09915;old_locus_tag=YP1902%2CYP_1902 NC_005810.1 Protein Homology CDS 2119907 2120692 . - 0 ID=cds1926;Parent=gene1975;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11 NC_005810.1 RefSeq gene 2120689 2121447 . - . ID=gene1976;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=YP_RS09920;old_locus_tag=YP1903%2CYP_1903 NC_005810.1 Protein Homology CDS 2120689 2121447 . - 0 ID=cds1927;Parent=gene1976;Dbxref=Genbank:WP_002228434.1;Name=WP_002228434.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_002228434.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 2121474 2121492 . + . ID=id390;Dbxref=CollecTF:EXPSITE_0000c700;Note=Transcription factor binding site for NP_991864. Originally reported in Yersinia pestis biovar microtus strain 201~Evidence of regulation for: YP_1904%2C YP_1903;gbkey=protein_bind NC_005810.1 RefSeq gene 2121523 2122479 . + . ID=gene1977;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=YP_RS09925;old_locus_tag=YP1904%2CYP_1904 NC_005810.1 Protein Homology CDS 2121523 2122479 . + 0 ID=cds1928;Parent=gene1977;Dbxref=Genbank:WP_002227944.1;Name=WP_002227944.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_002227944.1;transl_table=11 NC_005810.1 RefSeq gene 2122500 2123816 . + . ID=gene1978;Name=YP_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09930;old_locus_tag=YP1905%2CYP_1905 NC_005810.1 Protein Homology CDS 2122500 2123816 . + 0 ID=cds1929;Parent=gene1978;Dbxref=Genbank:WP_002228437.1;Name=WP_002228437.1;gbkey=CDS;product=peptidase;protein_id=WP_002228437.1;transl_table=11 NC_005810.1 RefSeq gene 2124083 2125045 . + . ID=gene1979;Name=YP_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09935;old_locus_tag=YP1906%2CYP_1906 NC_005810.1 Protein Homology CDS 2124083 2125045 . + 0 ID=cds1930;Parent=gene1979;Dbxref=Genbank:WP_002211194.1;Name=WP_002211194.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_002211194.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2125164 2125336 . + . ID=id391;gbkey=repeat_region NC_005810.1 RefSeq gene 2125385 2126827 . - . ID=gene1980;Name=YP_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09940;old_locus_tag=YP1907%2CYP_1907 NC_005810.1 Protein Homology CDS 2125385 2126827 . - 0 ID=cds1931;Parent=gene1980;Dbxref=Genbank:WP_002211193.1;Name=WP_002211193.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NC_005810.1 RefSeq gene 2127157 2128026 . - . ID=gene1981;Name=YP_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09945;old_locus_tag=YP1908%2CYP_1908 NC_005810.1 Protein Homology CDS 2127157 2128026 . - 0 ID=cds1932;Parent=gene1981;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NC_005810.1 RefSeq gene 2128379 2129863 . + . ID=gene1982;Name=YP_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09950;old_locus_tag=YP1909%2CYP_1909 NC_005810.1 Protein Homology CDS 2128379 2129863 . + 0 ID=cds1933;Parent=gene1982;Dbxref=Genbank:WP_002211191.1;Name=WP_002211191.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_002211191.1;transl_table=11 NC_005810.1 RefSeq gene 2130105 2130746 . + . ID=gene1983;Name=YP_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09955;old_locus_tag=YP1910%2CYP_1910 NC_005810.1 Protein Homology CDS 2130105 2130746 . + 0 ID=cds1934;Parent=gene1983;Dbxref=Genbank:WP_002211190.1;Name=WP_002211190.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_002211190.1;transl_table=11 NC_005810.1 RefSeq gene 2131461 2131904 . + . ID=gene1984;Name=YP_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09960;old_locus_tag=YP1911 NC_005810.1 Protein Homology CDS 2131461 2131904 . + 0 ID=cds1935;Parent=gene1984;Dbxref=Genbank:WP_002211188.1;Name=WP_002211188.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_002211188.1;transl_table=11 NC_005810.1 RefSeq gene 2131891 2132220 . + . ID=gene1985;Name=YP_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09965;old_locus_tag=YP1912%2CYP_1912 NC_005810.1 Protein Homology CDS 2131891 2132220 . + 0 ID=cds1936;Parent=gene1985;Dbxref=Genbank:WP_002211187.1;Name=WP_002211187.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_002211187.1;transl_table=11 NC_005810.1 RefSeq gene 2132352 2132696 . - . ID=gene1986;Name=YP_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09970;old_locus_tag=YP1913%2CYP_1913 NC_005810.1 Protein Homology CDS 2132352 2132696 . - 0 ID=cds1937;Parent=gene1986;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11 NC_005810.1 RefSeq gene 2132827 2134221 . + . ID=gene1987;Name=YP_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09975;old_locus_tag=YP1914%2CYP_1914 NC_005810.1 Protein Homology CDS 2132827 2134221 . + 0 ID=cds1938;Parent=gene1987;Dbxref=Genbank:WP_002230883.1;Name=WP_002230883.1;gbkey=CDS;product=helicase;protein_id=WP_002230883.1;transl_table=11 NC_005810.1 RefSeq gene 2134293 2134991 . + . ID=gene1988;Name=YP_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09980;old_locus_tag=YP1915%2CYP_1915 NC_005810.1 Protein Homology CDS 2134293 2134991 . + 0 ID=cds1939;Parent=gene1988;Dbxref=Genbank:WP_002211184.1;Name=WP_002211184.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_002211184.1;transl_table=11 NC_005810.1 RefSeq gene 2135128 2135733 . + . ID=gene1989;Name=YP_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09985;old_locus_tag=YP1916%2CYP_1916 NC_005810.1 Protein Homology CDS 2135128 2135733 . + 0 ID=cds1940;Parent=gene1989;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2135769 2135885 . + . ID=id392;gbkey=repeat_region NC_005810.1 RefSeq gene 2136376 2138064 . + . ID=gene1990;Name=YP_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09990;old_locus_tag=YP1917%2CYP_1917 NC_005810.1 Protein Homology CDS 2136376 2138064 . + 0 ID=cds1941;Parent=gene1990;Dbxref=Genbank:WP_002220632.1;Name=WP_002220632.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002220632.1;transl_table=11 NC_005810.1 RefSeq gene 2138224 2139345 . + . ID=gene1991;Name=YP_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS09995;old_locus_tag=YP1918%2CYP_1918 NC_005810.1 Protein Homology CDS 2138224 2139345 . + 0 ID=cds1942;Parent=gene1991;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NC_005810.1 RefSeq gene 2139582 2139851 . - . ID=gene1992;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YP_RS10000;old_locus_tag=YP1919%2CYP_1919 NC_005810.1 Protein Homology CDS 2139582 2139851 . - 0 ID=cds1943;Parent=gene1992;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11 NC_005810.1 RefSeq gene 2139855 2140667 . - . ID=gene1993;Name=YP_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10005;old_locus_tag=YP1920%2CYP_1920 NC_005810.1 Protein Homology CDS 2139855 2140667 . - 0 ID=cds1944;Parent=gene1993;Dbxref=Genbank:WP_002211179.1;Name=WP_002211179.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_002211179.1;transl_table=11 NC_005810.1 RefSeq gene 2140692 2141378 . - . ID=gene1994;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YP_RS10010;old_locus_tag=YP1921%2CYP_1921 NC_005810.1 Protein Homology CDS 2140692 2141378 . - 0 ID=cds1945;Parent=gene1994;Dbxref=Genbank:WP_002220631.1;Name=WP_002220631.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2142041 2142072 . + . ID=id393;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2142095 2142367 . + . ID=gene1995;Name=YP_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10015;old_locus_tag=YP1923%2CYP_1923 NC_005810.1 Protein Homology CDS 2142095 2142367 . + 0 ID=cds1946;Parent=gene1995;Dbxref=Genbank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211743.1;transl_table=11 NC_005810.1 RefSeq gene 2142508 2143593 . + . ID=gene1996;Name=YP_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10020;old_locus_tag=YP1924%2CYP_1924 NC_005810.1 Protein Homology CDS 2142508 2143593 . + 0 ID=cds1947;Parent=gene1996;Dbxref=Genbank:WP_002215627.1;Name=WP_002215627.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215627.1;transl_table=11 NC_005810.1 RefSeq gene 2143664 2144320 . + . ID=gene1997;Name=YP_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10025;old_locus_tag=YP1925%2CYP_1925 NC_005810.1 Protein Homology CDS 2143664 2144320 . + 0 ID=cds1948;Parent=gene1997;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11 NC_005810.1 RefSeq gene 2144423 2144869 . + . ID=gene1998;Name=YP_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10030;old_locus_tag=YP1926%2CYP_1926 NC_005810.1 Protein Homology CDS 2144423 2144869 . + 0 ID=cds1949;Parent=gene1998;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11 NC_005810.1 RefSeq gene 2144896 2146134 . - . ID=gene1999;Name=YP_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10035 NC_005810.1 Protein Homology CDS 2144896 2146134 . - 0 ID=cds1950;Parent=gene1999;Dbxref=Genbank:WP_002211738.1;Name=WP_002211738.1;gbkey=CDS;product=integrase;protein_id=WP_002211738.1;transl_table=11 NC_005810.1 RefSeq region 2144899 2148144 . - . ID=id394;Dbxref=GeneID:2766976;Note=int3%3B similar to Escherichia coli O157:H7 integrase Int TR:Q9EY96 (EMBL:AP000400) (428 aa) and to Escherichia coli lambdoid prophage RAC integrase IntR SW:INTR_ECOLI (P76056) (411 aa)%3B disrupted by IS100;gbkey=misc_feature NC_005810.1 RefSeq repeat_region 2146117 2148073 . + . ID=id395;gbkey=repeat_region NC_005810.1 RefSeq region 2146118 2148070 . + . ID=id396;gbkey=mobile_element NC_005810.1 RefSeq gene 2146204 2147226 . + . ID=gene2000;Name=YP_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10040;old_locus_tag=YP1928%2CYP_1928 NC_005810.1 Protein Homology CDS 2146204 2147226 . + 0 ID=cds1951;Parent=gene2000;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 2147226 2148005 . + . ID=gene2001;Name=YP_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10045;old_locus_tag=YP1929%2CYP_1929 NC_005810.1 Protein Homology CDS 2147226 2148005 . + 0 ID=cds1952;Parent=gene2001;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 2148173 2148433 . - . ID=gene2002;Name=YP_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10050;old_locus_tag=YP1930%2CYP_1930 NC_005810.1 Protein Homology CDS 2148173 2148433 . - 0 ID=cds1953;Parent=gene2002;Dbxref=Genbank:WP_002215632.1;Name=WP_002215632.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002215632.1;transl_table=11 NC_005810.1 RefSeq gene 2148733 2149431 . - . ID=gene2003;Name=YP_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10055;old_locus_tag=YP1932%2CYP_1932 NC_005810.1 Protein Homology CDS 2148733 2149431 . - 0 ID=cds1954;Parent=gene2003;Dbxref=Genbank:WP_002211737.1;Name=WP_002211737.1;gbkey=CDS;product=DNA methyltransferase;protein_id=WP_002211737.1;transl_table=11 NC_005810.1 RefSeq gene 2149458 2149904 . + . ID=gene2004;Name=YP_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10060;old_locus_tag=YP1933%2CYP_1933 NC_005810.1 Protein Homology CDS 2149458 2149904 . + 0 ID=cds1955;Parent=gene2004;Dbxref=Genbank:WP_002211736.1;Name=WP_002211736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211736.1;transl_table=11 NC_005810.1 RefSeq gene 2149978 2150583 . + . ID=gene2005;Name=YP_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10065;old_locus_tag=YP1934%2CYP_1934 NC_005810.1 Protein Homology CDS 2149978 2150583 . + 0 ID=cds1956;Parent=gene2005;Dbxref=Genbank:WP_002211735.1;Name=WP_002211735.1;gbkey=CDS;product=protein ninG;protein_id=WP_002211735.1;transl_table=11 NC_005810.1 RefSeq gene 2150584 2150973 . + . ID=gene2006;Name=YP_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10070;old_locus_tag=YP1935%2CYP_1935 NC_005810.1 Protein Homology CDS 2150584 2150973 . + 0 ID=cds1957;Parent=gene2006;Dbxref=Genbank:WP_002215636.1;Name=WP_002215636.1;gbkey=CDS;product=antitermination protein;protein_id=WP_002215636.1;transl_table=11 NC_005810.1 RefSeq gene 2150977 2151195 . + . ID=gene2007;Name=YP_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10075;old_locus_tag=YP1936%2CYP_1936 NC_005810.1 Protein Homology CDS 2150977 2151195 . + 0 ID=cds1958;Parent=gene2007;Dbxref=Genbank:WP_002215638.1;Name=WP_002215638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215638.1;transl_table=11 NC_005810.1 RefSeq gene 2151244 2151807 . + . ID=gene2008;Name=YP_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10080;old_locus_tag=YP1937%2CYP_1937 NC_005810.1 Protein Homology CDS 2151244 2151807 . + 0 ID=cds1959;Parent=gene2008;Dbxref=Genbank:WP_002211732.1;Name=WP_002211732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211732.1;transl_table=11 NC_005810.1 RefSeq gene 2151892 2152068 . - . ID=gene2009;Name=YP_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10085;old_locus_tag=YP1938%2CYP_1938 NC_005810.1 Protein Homology CDS 2151892 2152068 . - 0 ID=cds1960;Parent=gene2009;Dbxref=Genbank:WP_002393183.1;Name=WP_002393183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002393183.1;transl_table=11 NC_005810.1 RefSeq gene 2152233 2152382 . + . ID=gene2010;Name=YP_RS10090;end_range=2152382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10090;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 2152233 2152382 . + 0 ID=cds1961;Parent=gene2010;end_range=2152382,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=formyltetrahydrofolate deformylase;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 2152373 2153695 . + . ID=id397;gbkey=repeat_region NC_005810.1 RefSeq region 2152376 2153690 . - . ID=id398;gbkey=mobile_element NC_005810.1 RefSeq gene 2152411 2153619 . - . ID=gene2011;Name=YP_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10095;old_locus_tag=YP1939%2CYP_1939 NC_005810.1 Protein Homology CDS 2152411 2153619 . - 0 ID=cds1962;Parent=gene2011;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2153904 2153935 . + . ID=id399;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2153924 2155096 . - . ID=gene2012;Name=YP_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10100;old_locus_tag=YP1940%2CYP_1940 NC_005810.1 Protein Homology CDS 2153924 2155096 . - 0 ID=cds1963;Parent=gene2012;Dbxref=Genbank:WP_002214492.1;Name=WP_002214492.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NC_005810.1 RefSeq gene 2155100 2156299 . - . ID=gene2013;Name=YP_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10105;old_locus_tag=YP1941%2CYP_1941 NC_005810.1 Protein Homology CDS 2155100 2156299 . - 0 ID=cds1964;Parent=gene2013;Dbxref=Genbank:WP_002211693.1;Name=WP_002211693.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=aminotransferase;protein_id=WP_002211693.1;transl_table=11 NC_005810.1 RefSeq gene 2156316 2157056 . - . ID=gene2014;Name=YP_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10110;old_locus_tag=YP1942%2CYP_1942 NC_005810.1 Protein Homology CDS 2156316 2157056 . - 0 ID=cds1965;Parent=gene2014;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NC_005810.1 RefSeq gene 2158148 2158504 . + . ID=gene2015;Name=YP_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10115;old_locus_tag=YP1943%2CYP_1943 NC_005810.1 Protein Homology CDS 2158148 2158504 . + 0 ID=cds1966;Parent=gene2015;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NC_005810.1 RefSeq gene 2158921 2159451 . - . ID=gene2016;Name=YP_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10120;old_locus_tag=YP1944%2CYP_1944 NC_005810.1 Protein Homology CDS 2158921 2159451 . - 0 ID=cds1967;Parent=gene2016;Dbxref=Genbank:WP_002227934.1;Name=WP_002227934.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_002227934.1;transl_table=11 NC_005810.1 RefSeq gene 2159687 2161261 . - . ID=gene2017;Name=YP_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10125;old_locus_tag=YP1945%2CYP_1945 NC_005810.1 Protein Homology CDS 2159687 2161261 . - 0 ID=cds1968;Parent=gene2017;Dbxref=Genbank:WP_002211689.1;Name=WP_002211689.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_002211689.1;transl_table=11 NC_005810.1 RefSeq gene 2161505 2162224 . + . ID=gene2018;Name=YP_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10130;old_locus_tag=YP1946%2CYP_1946 NC_005810.1 Protein Homology CDS 2161505 2162224 . + 0 ID=cds1969;Parent=gene2018;Dbxref=Genbank:WP_002211688.1;Name=WP_002211688.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_002211688.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2162263 2162395 . + . ID=id400;gbkey=repeat_region NC_005810.1 RefSeq gene 2162442 2163977 . - . ID=gene2019;Name=YP_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10135;old_locus_tag=YP1947%2CYP_1947 NC_005810.1 Protein Homology CDS 2162442 2163977 . - 0 ID=cds1970;Parent=gene2019;Dbxref=Genbank:WP_002211687.1;Name=WP_002211687.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_002211687.1;transl_table=11 NC_005810.1 RefSeq gene 2164442 2165746 . + . ID=gene2020;Name=YP_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10140;old_locus_tag=YP1948%2CYP_1948 NC_005810.1 Protein Homology CDS 2164442 2165746 . + 0 ID=cds1971;Parent=gene2020;Dbxref=Genbank:WP_002211686.1;Name=WP_002211686.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NC_005810.1 RefSeq gene 2165762 2166964 . - . ID=gene2021;Name=YP_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10145;old_locus_tag=YP1949%2CYP_1949 NC_005810.1 Protein Homology CDS 2165762 2166964 . - 0 ID=cds1972;Parent=gene2021;Dbxref=Genbank:WP_002216508.1;Name=WP_002216508.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002216508.1;transl_table=11 NC_005810.1 RefSeq gene 2167229 2168098 . - . ID=gene2022;Name=YP_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10150;old_locus_tag=YP1950%2CYP_1950 NC_005810.1 Protein Homology CDS 2167229 2168098 . - 0 ID=cds1973;Parent=gene2022;Dbxref=Genbank:WP_002211685.1;Name=WP_002211685.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002211685.1;transl_table=11 NC_005810.1 RefSeq gene 2168296 2169201 . + . ID=gene2023;Name=YP_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10155;old_locus_tag=YP1951%2CYP_1951 NC_005810.1 Protein Homology CDS 2168296 2169201 . + 0 ID=cds1974;Parent=gene2023;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NC_005810.1 RefSeq gene 2169236 2170354 . - . ID=gene2024;Name=YP_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10160;old_locus_tag=YP1952%2CYP_1952 NC_005810.1 Protein Homology CDS 2169236 2170354 . - 0 ID=cds1975;Parent=gene2024;Dbxref=Genbank:WP_002211683.1;Name=WP_002211683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211683.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2169242 2169271 . + . ID=id401;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2170462 2171736 . - . ID=gene2025;Name=YP_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10165;old_locus_tag=YP1953%2CYP_1953 NC_005810.1 Protein Homology CDS 2170462 2171736 . - 0 ID=cds1976;Parent=gene2025;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11 NC_005810.1 RefSeq gene 2171886 2173820 . - . ID=gene2026;Name=YP_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10170;old_locus_tag=YP1954%2CYP_1954 NC_005810.1 Protein Homology CDS 2171886 2173820 . - 0 ID=cds1977;Parent=gene2026;Dbxref=Genbank:WP_011171854.1;Name=WP_011171854.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_011171854.1;transl_table=11 NC_005810.1 RefSeq gene 2174243 2175013 . + . ID=gene2027;Name=YP_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10175;old_locus_tag=YP1955%2CYP_1955 NC_005810.1 Protein Homology CDS 2174243 2175013 . + 0 ID=cds1978;Parent=gene2027;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11 NC_005810.1 RefSeq gene 2175086 2175961 . - . ID=gene2028;Name=YP_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10180;old_locus_tag=YP1956%2CYP_1956 NC_005810.1 Protein Homology CDS 2175086 2175961 . - 0 ID=cds1979;Parent=gene2028;Dbxref=Genbank:WP_002211679.1;Name=WP_002211679.1;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;protein_id=WP_002211679.1;transl_table=11 NC_005810.1 RefSeq gene 2176275 2177270 . - . ID=gene2029;Name=YP_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10185;old_locus_tag=YP1957%2CYP_1957 NC_005810.1 Protein Homology CDS 2176275 2177270 . - 0 ID=cds1980;Parent=gene2029;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NC_005810.1 RefSeq gene 2177618 2178031 . + . ID=gene2030;Name=YP_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10190;old_locus_tag=YP1958%2CYP_1958 NC_005810.1 Protein Homology CDS 2177618 2178031 . + 0 ID=cds1981;Parent=gene2030;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NC_005810.1 RefSeq gene 2178102 2178374 . + . ID=gene2031;Name=YP_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10195;old_locus_tag=YP1959 NC_005810.1 Protein Homology CDS 2178102 2178374 . + 0 ID=cds1982;Parent=gene2031;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11 NC_005810.1 RefSeq gene 2178508 2179155 . - . ID=gene2032;Name=YP_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10200;old_locus_tag=YP1960%2CYP_1960 NC_005810.1 Protein Homology CDS 2178508 2179155 . - 0 ID=cds1983;Parent=gene2032;Dbxref=Genbank:WP_002211676.1;Name=WP_002211676.1;gbkey=CDS;product=nicotinamidase/pyrazinamidase;protein_id=WP_002211676.1;transl_table=11 NC_005810.1 RefSeq gene 2179170 2180186 . - . ID=gene2033;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YP_RS10205;old_locus_tag=YP1961%2CYP_1961 NC_005810.1 Protein Homology CDS 2179170 2180186 . - 0 ID=cds1984;Parent=gene2033;Dbxref=Genbank:WP_002211675.1;Name=WP_002211675.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_002211675.1;transl_table=11 NC_005810.1 RefSeq gene 2180303 2182153 . - . ID=gene2034;Name=YP_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10210;old_locus_tag=YP1962%2CYP_1962 NC_005810.1 Protein Homology CDS 2180303 2182153 . - 0 ID=cds1985;Parent=gene2034;Dbxref=Genbank:WP_002230886.1;Name=WP_002230886.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_002230886.1;transl_table=11 NC_005810.1 RefSeq gene 2182316 2182867 . + . ID=gene2035;Name=YP_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10215;old_locus_tag=YP1963%2CYP_1963 NC_005810.1 Protein Homology CDS 2182316 2182867 . + 0 ID=cds1986;Parent=gene2035;Dbxref=Genbank:WP_002211673.1;Name=WP_002211673.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211673.1;transl_table=11 NC_005810.1 RefSeq gene 2183092 2184138 . + . ID=gene2036;Name=YP_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10220;old_locus_tag=YP1964%2CYP_1964 NC_005810.1 Protein Homology CDS 2183092 2184138 . + 0 ID=cds1987;Parent=gene2036;Dbxref=Genbank:WP_002211671.1;Name=WP_002211671.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_002211671.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2184126 2184185 . + . ID=id402;Note=degenerate repeat region containing 4 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2184215 2186140 . + . ID=gene2037;Name=YP_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10225;old_locus_tag=YP1965%2CYP_1965 NC_005810.1 Protein Homology CDS 2184215 2186140 . + 0 ID=cds1988;Parent=gene2037;Dbxref=Genbank:WP_002230887.1;Name=WP_002230887.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_002230887.1;transl_table=11 NC_005810.1 RefSeq gene 2186137 2186427 . + . ID=gene2038;Name=YP_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10230;old_locus_tag=YP1966%2CYP_1966 NC_005810.1 Protein Homology CDS 2186137 2186427 . + 0 ID=cds1989;Parent=gene2038;Dbxref=Genbank:WP_011171856.1;Name=WP_011171856.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171856.1;transl_table=11 NC_005810.1 RefSeq gene 2186440 2186826 . - . ID=gene2039;Name=YP_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10235;old_locus_tag=YP1967%2CYP_1967 NC_005810.1 Protein Homology CDS 2186440 2186826 . - 0 ID=cds1990;Parent=gene2039;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11 NC_005810.1 RefSeq gene 2186924 2187730 . - . ID=gene2040;Name=YP_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10240;old_locus_tag=YP1968%2CYP_1968 NC_005810.1 Protein Homology CDS 2186924 2187730 . - 0 ID=cds1991;Parent=gene2040;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11 NC_005810.1 RefSeq gene 2188540 2189400 . + . ID=gene2041;Name=YP_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10245;old_locus_tag=YP1969%2CYP_1969 NC_005810.1 Protein Homology CDS 2188540 2189400 . + 0 ID=cds1992;Parent=gene2041;Dbxref=Genbank:WP_002211665.1;Name=WP_002211665.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211665.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2189462 2189926 . + . ID=id403;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2189462 2189807 . + . ID=id404;Note=degenerate repeat region containing 2 copies of a 173bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2189908 2189992 . - . ID=gene2042;Name=YP_RS10250;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS10250;old_locus_tag=tRNA-Tyr_1%2CYP_t38 NC_005810.1 tRNAscan-SE tRNA 2189908 2189992 . - . ID=rna45;Parent=gene2042;anticodon=(pos:complement(2189956..2189958));gbkey=tRNA;product=tRNA-Tyr NC_005810.1 tRNAscan-SE exon 2189908 2189992 . - . ID=id405;Parent=rna45;anticodon=(pos:complement(2189956..2189958));gbkey=tRNA;product=tRNA-Tyr NC_005810.1 RefSeq gene 2190141 2190989 . - . ID=gene2043;Name=YP_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10255;old_locus_tag=YP1970%2CYP_1970 NC_005810.1 Protein Homology CDS 2190141 2190989 . - 0 ID=cds1993;Parent=gene2043;Dbxref=Genbank:WP_002230891.1;Name=WP_002230891.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_002230891.1;transl_table=11 NC_005810.1 RefSeq gene 2191073 2191537 . - . ID=gene2044;Name=YP_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10260;old_locus_tag=YP1971%2CYP_1971 NC_005810.1 Protein Homology CDS 2191073 2191537 . - 0 ID=cds1994;Parent=gene2044;Dbxref=Genbank:WP_002210666.1;Name=WP_002210666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210666.1;transl_table=11 NC_005810.1 RefSeq gene 2192871 2193887 . + . ID=gene2045;Name=YP_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10265;old_locus_tag=YP1972%2CYP_1972 NC_005810.1 Protein Homology CDS 2192871 2193887 . + 0 ID=cds1995;Parent=gene2045;Dbxref=Genbank:WP_002230892.1;Name=WP_002230892.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230892.1;transl_table=11 NC_005810.1 RefSeq gene 2194194 2195540 . + . ID=gene2046;Name=YP_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10270;old_locus_tag=YP1973%2CYP_1973 NC_005810.1 Protein Homology CDS 2194194 2195540 . + 0 ID=cds1996;Parent=gene2046;Dbxref=Genbank:WP_002210664.1;Name=WP_002210664.1;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_002210664.1;transl_table=11 NC_005810.1 RefSeq gene 2195975 2196382 . - . ID=gene2047;Name=YP_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10275;old_locus_tag=YP1974%2CYP_1974 NC_005810.1 Protein Homology CDS 2195975 2196382 . - 0 ID=cds1997;Parent=gene2047;Dbxref=Genbank:WP_002223593.1;Name=WP_002223593.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002223593.1;transl_table=11 NC_005810.1 RefSeq gene 2197132 2197722 . + . ID=gene2048;Name=YP_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10280;old_locus_tag=YP1975%2CYP_1975 NC_005810.1 Protein Homology CDS 2197132 2197722 . + 0 ID=cds1998;Parent=gene2048;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NC_005810.1 RefSeq gene 2198473 2201148 . - . ID=gene2049;Name=YP_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10285;old_locus_tag=YP1976%2CYP_1976 NC_005810.1 Protein Homology CDS 2198473 2201148 . - 0 ID=cds1999;Parent=gene2049;Dbxref=Genbank:WP_002210657.1;Name=WP_002210657.1;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_002210657.1;transl_table=11 NC_005810.1 RefSeq gene 2201955 2202599 . + . ID=gene2050;Name=YP_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10290;old_locus_tag=YP1978%2CYP_1978 NC_005810.1 Protein Homology CDS 2201955 2202599 . + 0 ID=cds2000;Parent=gene2050;Dbxref=Genbank:WP_002210656.1;Name=WP_002210656.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210656.1;transl_table=11 NC_005810.1 RefSeq gene 2203437 2205074 . + . ID=gene2051;Name=YP_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10295;old_locus_tag=YP1979%2CYP_1979 NC_005810.1 Protein Homology CDS 2203437 2205074 . + 0 ID=cds2001;Parent=gene2051;Dbxref=Genbank:WP_011171857.1;Name=WP_011171857.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_011171857.1;transl_table=11 NC_005810.1 RefSeq gene 2205161 2206081 . + . ID=gene2052;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YP_RS10300;old_locus_tag=YP1980%2CYP_1980 NC_005810.1 Protein Homology CDS 2205161 2206081 . + 0 ID=cds2002;Parent=gene2052;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11 NC_005810.1 RefSeq gene 2206097 2207005 . + . ID=gene2053;Name=YP_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10305;old_locus_tag=YP1981%2CYP_1981 NC_005810.1 Protein Homology CDS 2206097 2207005 . + 0 ID=cds2003;Parent=gene2053;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11 NC_005810.1 RefSeq gene 2207017 2208018 . + . ID=gene2054;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YP_RS10310;old_locus_tag=YP1982%2CYP_1982 NC_005810.1 Protein Homology CDS 2207017 2208018 . + 0 ID=cds2004;Parent=gene2054;Dbxref=Genbank:WP_002210652.1;Name=WP_002210652.1;gbkey=CDS;gene=oppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210652.1;transl_table=11 NC_005810.1 RefSeq gene 2208015 2209016 . + . ID=gene2055;Name=YP_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10315;old_locus_tag=YP1983%2CYP_1983 NC_005810.1 Protein Homology CDS 2208015 2209016 . + 0 ID=cds2005;Parent=gene2055;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11 NC_005810.1 RefSeq gene 2209065 2209280 . - . ID=gene2056;Name=YP_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10320 NC_005810.1 GeneMarkS+ CDS 2209065 2209280 . - 0 ID=cds2006;Parent=gene2056;Dbxref=Genbank:WP_015683825.1;Name=WP_015683825.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683825.1;transl_table=11 NC_005810.1 RefSeq gene 2209577 2209792 . + . ID=gene2057;Name=YP_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10325;old_locus_tag=YP1984%2CYP_1984 NC_005810.1 Protein Homology CDS 2209577 2209792 . + 0 ID=cds2007;Parent=gene2057;Dbxref=Genbank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NC_005810.1 RefSeq gene 2210091 2210414 . - . ID=gene2058;Name=YP_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10330;old_locus_tag=YP1985%2CYP_1985 NC_005810.1 Protein Homology CDS 2210091 2210414 . - 0 ID=cds2008;Parent=gene2058;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NC_005810.1 RefSeq gene 2210579 2212039 . - . ID=gene2059;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YP_RS10335;old_locus_tag=YP1986%2CYP_1986 NC_005810.1 Protein Homology CDS 2210579 2212039 . - 0 ID=cds2009;Parent=gene2059;Dbxref=Genbank:WP_002210648.1;Name=WP_002210648.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_002210648.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2212174 2212348 . + . ID=id406;gbkey=repeat_region NC_005810.1 RefSeq gene 2213086 2213625 . + . ID=gene2060;Name=YP_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10340;old_locus_tag=YP1988%2CYP_1988 NC_005810.1 Protein Homology CDS 2213086 2213625 . + 0 ID=cds2010;Parent=gene2060;Dbxref=Genbank:WP_002210646.1;Name=WP_002210646.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002210646.1;transl_table=11 NC_005810.1 RefSeq gene 2213846 2214109 . + . ID=gene2061;Name=YP_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10345;old_locus_tag=YP1989%2CYP_1989 NC_005810.1 Protein Homology CDS 2213846 2214109 . + 0 ID=cds2011;Parent=gene2061;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NC_005810.1 RefSeq gene 2214693 2214989 . - . ID=gene2062;Name=YP_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10350;old_locus_tag=YP1991%2CYP_1991 NC_005810.1 Protein Homology CDS 2214693 2214989 . - 0 ID=cds2012;Parent=gene2062;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11 NC_005810.1 RefSeq gene 2215290 2216048 . + . ID=gene2063;Name=YP_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10355;old_locus_tag=YP1992%2CYP_1992 NC_005810.1 Protein Homology CDS 2215290 2216048 . + 0 ID=cds2013;Parent=gene2063;Dbxref=Genbank:WP_002210642.1;Name=WP_002210642.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002210642.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2216047 2217366 . + . ID=id407;gbkey=repeat_region NC_005810.1 RefSeq region 2216049 2217363 . - . ID=id408;gbkey=mobile_element NC_005810.1 RefSeq gene 2216084 2217292 . - . ID=gene2064;Name=YP_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10360;old_locus_tag=YP1993%2CYP_1993 NC_005810.1 Protein Homology CDS 2216084 2217292 . - 0 ID=cds2014;Parent=gene2064;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2217440 2217889 . - . ID=gene2065;Name=YP_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10365;old_locus_tag=YP1994%2CYP_1994 NC_005810.1 Protein Homology CDS 2217440 2217889 . - 0 ID=cds2015;Parent=gene2065;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11 NC_005810.1 RefSeq gene 2217969 2218511 . - . ID=gene2066;Name=YP_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10370;old_locus_tag=YP1995%2CYP_1995 NC_005810.1 Protein Homology CDS 2217969 2218511 . - 0 ID=cds2016;Parent=gene2066;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11 NC_005810.1 RefSeq gene 2218742 2219824 . + . ID=gene2067;Name=YP_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10375 NC_005810.1 Protein Homology CDS 2218742 2219824 . + 0 ID=cds2017;Parent=gene2067;Dbxref=Genbank:WP_002215978.1;Name=WP_002215978.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_002215978.1;transl_table=11 NC_005810.1 RefSeq gene 2219856 2220476 . + . ID=gene2068;Name=YP_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10380 NC_005810.1 Protein Homology CDS 2219856 2220476 . + 0 ID=cds2018;Parent=gene2068;Dbxref=Genbank:WP_002215979.1;Name=WP_002215979.1;gbkey=CDS;product=sulfate permease;protein_id=WP_002215979.1;transl_table=11 NC_005810.1 RefSeq gene 2220597 2221367 . - . ID=gene2069;Name=YP_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10385;old_locus_tag=YP1997%2CYP_1997 NC_005810.1 Protein Homology CDS 2220597 2221367 . - 0 ID=cds2019;Parent=gene2069;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11 NC_005810.1 RefSeq gene 2221529 2221744 . + . ID=gene2070;Name=YP_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10390;old_locus_tag=YP1998%2CYP_1998 NC_005810.1 Protein Homology CDS 2221529 2221744 . + 0 ID=cds2020;Parent=gene2070;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NC_005810.1 RefSeq gene 2221841 2222488 . + . ID=gene2071;Name=YP_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10395;old_locus_tag=YP1999%2CYP_1999 NC_005810.1 Protein Homology CDS 2221841 2222488 . + 0 ID=cds2021;Parent=gene2071;Dbxref=Genbank:WP_011171858.1;Name=WP_011171858.1;Note=receptor for colicin S4;gbkey=CDS;product=outer membrane protein W;protein_id=WP_011171858.1;transl_table=11 NC_005810.1 RefSeq gene 2222635 2222949 . - . ID=gene2072;Name=YP_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10400;old_locus_tag=YP2000%2CYP_2000 NC_005810.1 Protein Homology CDS 2222635 2222949 . - 0 ID=cds2022;Parent=gene2072;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11 NC_005810.1 RefSeq gene 2223292 2224098 . - . ID=gene2073;Name=YP_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10405;old_locus_tag=YP2001%2CYP_2001 NC_005810.1 Protein Homology CDS 2223292 2224098 . - 0 ID=cds2023;Parent=gene2073;Dbxref=Genbank:WP_002210634.1;Name=WP_002210634.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_002210634.1;transl_table=11 NC_005810.1 RefSeq gene 2224098 2225288 . - . ID=gene2074;Name=YP_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10410;old_locus_tag=YP2002%2CYP_2002 NC_005810.1 Protein Homology CDS 2224098 2225288 . - 0 ID=cds2024;Parent=gene2074;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NC_005810.1 RefSeq gene 2225445 2226872 . - . ID=gene2075;Name=YP_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10415;old_locus_tag=YP2003%2CYP_2003 NC_005810.1 Protein Homology CDS 2225445 2226872 . - 0 ID=cds2025;Parent=gene2075;Dbxref=Genbank:WP_002210632.1;Name=WP_002210632.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=tryptophan biosynthesis protein TrpCF;protein_id=WP_002210632.1;transl_table=11 NC_005810.1 RefSeq gene 2226876 2227874 . - . ID=gene2076;Name=YP_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10420;old_locus_tag=YP2004%2CYP_2004 NC_005810.1 Protein Homology CDS 2226876 2227874 . - 0 ID=cds2026;Parent=gene2076;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11 NC_005810.1 RefSeq gene 2227889 2228467 . - . ID=gene2077;Name=YP_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10425;old_locus_tag=YP2005%2CYP_2005 NC_005810.1 Protein Homology CDS 2227889 2228467 . - 0 ID=cds2027;Parent=gene2077;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11 NC_005810.1 RefSeq gene 2228467 2230029 . - . ID=gene2078;Name=YP_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10430;old_locus_tag=YP2006%2CYP_2006 NC_005810.1 Protein Homology CDS 2228467 2230029 . - 0 ID=cds2028;Parent=gene2078;Dbxref=Genbank:WP_002228454.1;Name=WP_002228454.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase subunit I;protein_id=WP_002228454.1;transl_table=11 NC_005810.1 RefSeq gene 2230148 2230210 . - . ID=gene2079;Name=YP_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10435;old_locus_tag=YP2007%2CYP_2007 NC_005810.1 Protein Homology CDS 2230148 2230210 . - 0 ID=cds2029;Parent=gene2079;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11 NC_005810.1 RefSeq gene 2230239 2230367 . - . ID=gene2080;Name=YP_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10440 NC_005810.1 Protein Homology CDS 2230239 2230367 . - 0 ID=cds2030;Parent=gene2080;Dbxref=Genbank:WP_002215982.1;Name=WP_002215982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215982.1;transl_table=11 NC_005810.1 RefSeq gene 2230448 2231383 . + . ID=gene2081;Name=YP_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10445;old_locus_tag=YP2008%2CYP_2008 NC_005810.1 Protein Homology CDS 2230448 2231383 . + 0 ID=cds2031;Parent=gene2081;Dbxref=Genbank:WP_002210629.1;Name=WP_002210629.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_002210629.1;transl_table=11 NC_005810.1 RefSeq gene 2231400 2232020 . + . ID=gene2082;Name=YP_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10450;old_locus_tag=YP2009%2CYP_2009 NC_005810.1 Protein Homology CDS 2231400 2232020 . + 0 ID=cds2032;Parent=gene2082;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11 NC_005810.1 RefSeq gene 2232350 2233384 . + . ID=gene2083;Name=YP_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10455;old_locus_tag=YP2010%2CYP_2010 NC_005810.1 Protein Homology CDS 2232350 2233384 . + 0 ID=cds2033;Parent=gene2083;Dbxref=Genbank:WP_002210627.1;Name=WP_002210627.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_002210627.1;transl_table=11 NC_005810.1 RefSeq gene 2233507 2234097 . - . ID=gene2084;Name=YP_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10460;old_locus_tag=YP2011%2CYP_2011 NC_005810.1 Protein Homology CDS 2233507 2234097 . - 0 ID=cds2034;Parent=gene2084;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11 NC_005810.1 RefSeq gene 2234114 2234875 . - . ID=gene2085;Name=YP_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10465;old_locus_tag=YP2012%2CYP_2012 NC_005810.1 Protein Homology CDS 2234114 2234875 . - 0 ID=cds2035;Parent=gene2085;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11 NC_005810.1 RefSeq gene 2235047 2236093 . + . ID=gene2086;Name=YP_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10470;old_locus_tag=YP2013%2CYP_2013 NC_005810.1 Protein Homology CDS 2235047 2236093 . + 0 ID=cds2036;Parent=gene2086;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11 NC_005810.1 RefSeq gene 2236212 2236463 . - . ID=gene2087;Name=YP_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10475;old_locus_tag=YP2014%2CYP_2014 NC_005810.1 Protein Homology CDS 2236212 2236463 . - 0 ID=cds2037;Parent=gene2087;Dbxref=Genbank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210623.1;transl_table=11 NC_005810.1 RefSeq gene 2236556 2236855 . + . ID=gene2088;Name=YP_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10480;old_locus_tag=YP2015 NC_005810.1 Protein Homology CDS 2236556 2236855 . + 0 ID=cds2038;Parent=gene2088;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NC_005810.1 RefSeq gene 2236882 2239497 . + . ID=gene2089;Name=YP_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10485;old_locus_tag=YP2016%2CYP_2016 NC_005810.1 Protein Homology CDS 2236882 2239497 . + 0 ID=cds2039;Parent=gene2089;Dbxref=Genbank:WP_002210622.1;Name=WP_002210622.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_002210622.1;transl_table=11 NC_005810.1 RefSeq gene 2239894 2240868 . + . ID=gene2090;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YP_RS10490;old_locus_tag=YP2017%2CYP_2017 NC_005810.1 Protein Homology CDS 2239894 2240868 . + 0 ID=cds2040;Parent=gene2090;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11 NC_005810.1 RefSeq gene 2241204 2242061 . + . ID=gene2091;Name=YP_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10495;old_locus_tag=YP2018%2CYP_2018 NC_005810.1 Protein Homology CDS 2241204 2242061 . + 0 ID=cds2041;Parent=gene2091;Dbxref=Genbank:WP_002210620.1;Name=WP_002210620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210620.1;transl_table=11 NC_005810.1 RefSeq gene 2242425 2245097 . + . ID=gene2092;Name=YP_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10500;old_locus_tag=YP2019%2CYP_2019 NC_005810.1 Protein Homology CDS 2242425 2245097 . + 0 ID=cds2042;Parent=gene2092;Dbxref=Genbank:WP_002215187.1;Name=WP_002215187.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_002215187.1;transl_table=11 NC_005810.1 RefSeq gene 2245261 2245851 . - . ID=gene2093;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YP_RS10505;old_locus_tag=YP2020%2CYP_2020 NC_005810.1 Protein Homology CDS 2245261 2245851 . - 0 ID=cds2043;Parent=gene2093;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11 NC_005810.1 RefSeq gene 2246357 2247118 . + . ID=gene2094;Name=YP_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10510;old_locus_tag=YP2022%2CYP_2022 NC_005810.1 Protein Homology CDS 2246357 2247118 . + 0 ID=cds2044;Parent=gene2094;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NC_005810.1 RefSeq gene 2247287 2247598 . + . ID=gene2095;Name=YP_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10515;old_locus_tag=YP2023%2CYP_2023 NC_005810.1 Protein Homology CDS 2247287 2247598 . + 0 ID=cds2045;Parent=gene2095;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11 NC_005810.1 RefSeq gene 2247605 2248774 . + . ID=gene2096;Name=YP_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10520;old_locus_tag=YP2024%2CYP_2024 NC_005810.1 Protein Homology CDS 2247605 2248774 . + 0 ID=cds2046;Parent=gene2096;Dbxref=Genbank:WP_002210615.1;Name=WP_002210615.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210615.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2248802 2248839 . + . ID=id409;Note=exact repeat region containing 2 copies of a 19 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2248896 2249195 . - . ID=gene2097;Name=YP_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10525;old_locus_tag=YP2025%2CYP_2025 NC_005810.1 Protein Homology CDS 2248896 2249195 . - 0 ID=cds2047;Parent=gene2097;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NC_005810.1 RefSeq gene 2249664 2250401 . + . ID=gene2098;Name=YP_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10530;old_locus_tag=YP2026%2CYP_2026 NC_005810.1 Protein Homology CDS 2249664 2250401 . + 0 ID=cds2048;Parent=gene2098;Dbxref=Genbank:WP_002210613.1;Name=WP_002210613.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_002210613.1;transl_table=11 NC_005810.1 RefSeq gene 2250401 2250727 . + . ID=gene2099;Name=YP_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10535;old_locus_tag=YP2027%2CYP_2027 NC_005810.1 Protein Homology CDS 2250401 2250727 . + 0 ID=cds2049;Parent=gene2099;Dbxref=Genbank:WP_002210612.1;Name=WP_002210612.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_002210612.1;transl_table=11 NC_005810.1 RefSeq gene 2250984 2251199 . - . ID=gene2100;Name=YP_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10540;old_locus_tag=YP2028%2CYP_2028 NC_005810.1 Protein Homology CDS 2250984 2251199 . - 0 ID=cds2050;Parent=gene2100;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11 NC_005810.1 RefSeq gene 2251679 2252374 . + . ID=gene2101;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YP_RS10545;old_locus_tag=YP2029%2CYP_2029 NC_005810.1 Protein Homology CDS 2251679 2252374 . + 0 ID=cds2051;Parent=gene2101;Dbxref=Genbank:WP_002210610.1;Name=WP_002210610.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NC_005810.1 RefSeq gene 2252403 2252651 . - . ID=gene2102;Name=YP_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10550;old_locus_tag=YP2030%2CYP_2030 NC_005810.1 Protein Homology CDS 2252403 2252651 . - 0 ID=cds2052;Parent=gene2102;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11 NC_005810.1 RefSeq gene 2252985 2253650 . + . ID=gene2103;Name=YP_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10555;old_locus_tag=YP2031%2CYP_2031 NC_005810.1 Protein Homology CDS 2252985 2253650 . + 0 ID=cds2053;Parent=gene2103;Dbxref=Genbank:WP_011171859.1;Name=WP_011171859.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_011171859.1;transl_table=11 NC_005810.1 RefSeq gene 2253767 2254072 . - . ID=gene2104;Name=YP_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10560;old_locus_tag=YP2032%2CYP_2032 NC_005810.1 Protein Homology CDS 2253767 2254072 . - 0 ID=cds2054;Parent=gene2104;Dbxref=Genbank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210607.1;transl_table=11 NC_005810.1 RefSeq gene 2254065 2256131 . - . ID=gene2105;Name=YP_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10565;old_locus_tag=YP2033%2CYP_2033 NC_005810.1 Protein Homology CDS 2254065 2256131 . - 0 ID=cds2055;Parent=gene2105;Dbxref=Genbank:WP_002220371.1;Name=WP_002220371.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_002220371.1;transl_table=11 NC_005810.1 RefSeq gene 2256481 2258415 . - . ID=gene2106;Name=YP_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10570;old_locus_tag=YP2034%2CYP_2034 NC_005810.1 Protein Homology CDS 2256481 2258415 . - 0 ID=cds2056;Parent=gene2106;Dbxref=Genbank:WP_002210605.1;Name=WP_002210605.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_002210605.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2258986 2259015 . + . ID=id410;Note=exact repeat region containing 3 copies of a 10 bp unit. 3 x GCAGTGCCAG repeats;gbkey=repeat_region NC_005810.1 RefSeq gene 2259084 2260394 . + . ID=gene2107;Name=YP_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10575;old_locus_tag=YP2035%2CYP_2035 NC_005810.1 Protein Homology CDS 2259084 2260394 . + 0 ID=cds2057;Parent=gene2107;Dbxref=Genbank:WP_002210604.1;Name=WP_002210604.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210604.1;transl_table=11 NC_005810.1 RefSeq gene 2260432 2261430 . + . ID=gene2108;Name=YP_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10580;old_locus_tag=YP2036%2CYP_2036 NC_005810.1 Protein Homology CDS 2260432 2261430 . + 0 ID=cds2058;Parent=gene2108;Dbxref=Genbank:WP_002210603.1;Name=WP_002210603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210603.1;transl_table=11 NC_005810.1 RefSeq gene 2261613 2262254 . - . ID=gene2109;Name=YP_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10585;old_locus_tag=YP2037%2CYP_2037 NC_005810.1 Protein Homology CDS 2261613 2262254 . - 0 ID=cds2059;Parent=gene2109;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NC_005810.1 RefSeq gene 2262251 2262952 . - . ID=gene2110;Name=YP_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10590;old_locus_tag=YP2038%2CYP_2038 NC_005810.1 Protein Homology CDS 2262251 2262952 . - 0 ID=cds2060;Parent=gene2110;Dbxref=Genbank:WP_002210601.1;Name=WP_002210601.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_002210601.1;transl_table=11 NC_005810.1 RefSeq gene 2262949 2263578 . - . ID=gene2111;Name=YP_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10595;old_locus_tag=YP2039%2CYP_2039 NC_005810.1 Protein Homology CDS 2262949 2263578 . - 0 ID=cds2061;Parent=gene2111;Dbxref=Genbank:WP_002210600.1;Name=WP_002210600.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit G;protein_id=WP_002210600.1;transl_table=11 NC_005810.1 RefSeq gene 2263588 2264682 . - . ID=gene2112;Name=YP_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10600;old_locus_tag=YP2040%2CYP_2040 NC_005810.1 Protein Homology CDS 2263588 2264682 . - 0 ID=cds2062;Parent=gene2112;Dbxref=Genbank:WP_002210599.1;Name=WP_002210599.1;gbkey=CDS;product=electron transporter RnfG;protein_id=WP_002210599.1;transl_table=11 NC_005810.1 RefSeq gene 2265171 2266076 . + . ID=gene2113;Name=YP_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10605;old_locus_tag=YP2041%2CYP_2041 NC_005810.1 Protein Homology CDS 2265171 2266076 . + 0 ID=cds2063;Parent=gene2113;Dbxref=Genbank:WP_002230903.1;Name=WP_002230903.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002230903.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2265435 2265458 . + . ID=id411;Note=exact repeat region containing 2 copies of a 12 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2266181 2268160 . - . ID=gene2114;Name=YP_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10610;old_locus_tag=YP2042%2CYP_2042 NC_005810.1 Protein Homology CDS 2266181 2268160 . - 0 ID=cds2064;Parent=gene2114;Dbxref=Genbank:WP_011171860.1;Name=WP_011171860.1;gbkey=CDS;product=electron transporter RnfC;protein_id=WP_011171860.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2266200 2266474 . + . ID=id412;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2266200 2266433 . + . ID=id413;Note=degenerate repeat region containing 2 copies of a 117bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2268210 2268776 . - . ID=gene2115;Name=YP_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10615;old_locus_tag=YP2043%2CYP_2043 NC_005810.1 Protein Homology CDS 2268210 2268776 . - 0 ID=cds2065;Parent=gene2115;Dbxref=Genbank:WP_002210596.1;Name=WP_002210596.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit B;protein_id=WP_002210596.1;transl_table=11 NC_005810.1 RefSeq gene 2268776 2269357 . - . ID=gene2116;Name=YP_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10620;old_locus_tag=YP2044%2CYP_2044 NC_005810.1 Protein Homology CDS 2268776 2269357 . - 0 ID=cds2066;Parent=gene2116;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11 NC_005810.1 RefSeq gene 2269485 2269928 . - . ID=gene2117;Name=YP_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10625;old_locus_tag=YP2045%2CYP_2045 NC_005810.1 Protein Homology CDS 2269485 2269928 . - 0 ID=cds2067;Parent=gene2117;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11 NC_005810.1 RefSeq gene 2270403 2272187 . + . ID=gene2118;Name=YP_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10630;old_locus_tag=YP2046 NC_005810.1 Protein Homology CDS 2270403 2272187 . + 0 ID=cds2068;Parent=gene2118;Dbxref=Genbank:WP_002230904.1;Name=WP_002230904.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002230904.1;transl_table=11 NC_005810.1 RefSeq gene 2272240 2272461 . + . ID=gene2119;Name=YP_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10635 NC_005810.1 GeneMarkS+ CDS 2272240 2272461 . + 0 ID=cds2069;Parent=gene2119;Dbxref=Genbank:WP_002215880.1;Name=WP_002215880.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215880.1;transl_table=11 NC_005810.1 RefSeq gene 2272486 2273479 . + . ID=gene2120;Name=YP_RS10640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10640;old_locus_tag=YP2047;pseudo=true NC_005810.1 Protein Homology CDS 2272486 2273479 . + 0 ID=cds2070;Parent=gene2120;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2273479 2273847 . + . ID=gene2121;Name=YP_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10645 NC_005810.1 Protein Homology CDS 2273479 2273847 . + 0 ID=cds2071;Parent=gene2121;Dbxref=Genbank:WP_002215882.1;Name=WP_002215882.1;gbkey=CDS;product=hemolysin D;protein_id=WP_002215882.1;transl_table=11 NC_005810.1 RefSeq gene 2273849 2275987 . + . ID=gene2122;Name=YP_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10650;old_locus_tag=YP2048%2CYP_2048 NC_005810.1 Protein Homology CDS 2273849 2275987 . + 0 ID=cds2072;Parent=gene2122;Dbxref=Genbank:WP_002210593.1;Name=WP_002210593.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002210593.1;transl_table=11 NC_005810.1 RefSeq gene 2276177 2277679 . - . ID=gene2123;Name=YP_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10655;old_locus_tag=YP2049%2CYP_2049 NC_005810.1 Protein Homology CDS 2276177 2277679 . - 0 ID=cds2073;Parent=gene2123;Dbxref=Genbank:WP_002210591.1;Name=WP_002210591.1;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_002210591.1;transl_table=11 NC_005810.1 RefSeq gene 2277763 2279466 . - . ID=gene2124;Name=YP_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10660;old_locus_tag=YP2050%2CYP_2050 NC_005810.1 Protein Homology CDS 2277763 2279466 . - 0 ID=cds2074;Parent=gene2124;Dbxref=Genbank:WP_002210590.1;Name=WP_002210590.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_002210590.1;transl_table=11 NC_005810.1 RefSeq gene 2279874 2280857 . + . ID=gene2125;Name=YP_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10665;old_locus_tag=YP2051%2CYP_2051 NC_005810.1 Protein Homology CDS 2279874 2280857 . + 0 ID=cds2075;Parent=gene2125;Dbxref=Genbank:WP_002210589.1;Name=WP_002210589.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NC_005810.1 RefSeq gene 2280955 2282526 . + . ID=gene2126;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YP_RS10670;old_locus_tag=YP2052%2CYP_2052 NC_005810.1 Protein Homology CDS 2280955 2282526 . + 0 ID=cds2076;Parent=gene2126;Dbxref=Genbank:WP_002210588.1;Name=WP_002210588.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_002210588.1;transl_table=11 NC_005810.1 RefSeq gene 2282544 2283593 . + . ID=gene2127;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YP_RS10675;old_locus_tag=YP2053%2CYP_2053 NC_005810.1 Protein Homology CDS 2282544 2283593 . + 0 ID=cds2077;Parent=gene2127;Dbxref=Genbank:WP_002210587.1;Name=WP_002210587.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_002210587.1;transl_table=11 NC_005810.1 RefSeq gene 2283834 2284635 . + . ID=gene2128;Name=YP_RS10680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10680;old_locus_tag=YP2054;partial=true;pseudo=true;start_range=.,2283834 NC_005810.1 Protein Homology CDS 2283834 2284635 . + 0 ID=cds2078;Parent=gene2128;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,2283834;transl_table=11 NC_005810.1 RefSeq gene 2284763 2285812 . + . ID=gene2129;Name=YP_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10685;old_locus_tag=YP2055%2CYP_2055 NC_005810.1 Protein Homology CDS 2284763 2285812 . + 0 ID=cds2079;Parent=gene2129;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NC_005810.1 RefSeq gene 2286006 2287034 . + . ID=gene2130;Name=YP_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10690;old_locus_tag=YP2056%2CYP_2056 NC_005810.1 Protein Homology CDS 2286006 2287034 . + 0 ID=cds2080;Parent=gene2130;Dbxref=Genbank:WP_002210584.1;Name=WP_002210584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210584.1;transl_table=11 NC_005810.1 RefSeq gene 2287240 2287839 . + . ID=gene2131;Name=YP_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10695;old_locus_tag=YP2058%2CYP_2058 NC_005810.1 Protein Homology CDS 2287240 2287839 . + 0 ID=cds2081;Parent=gene2131;Dbxref=Genbank:WP_002210583.1;Name=WP_002210583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210583.1;transl_table=11 NC_005810.1 RefSeq gene 2287888 2289432 . - . ID=gene2132;Name=YP_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10700;old_locus_tag=YP2059%2CYP_2059 NC_005810.1 Protein Homology CDS 2287888 2289432 . - 0 ID=cds2082;Parent=gene2132;Dbxref=Genbank:WP_002216605.1;Name=WP_002216605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216605.1;transl_table=11 NC_005810.1 RefSeq gene 2289672 2290847 . - . ID=gene2133;Name=YP_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10705;old_locus_tag=YP2060%2CYP_2060 NC_005810.1 Protein Homology CDS 2289672 2290847 . - 0 ID=cds2083;Parent=gene2133;Dbxref=Genbank:WP_002210579.1;Name=WP_002210579.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_002210579.1;transl_table=11 NC_005810.1 RefSeq gene 2291131 2292528 . + . ID=gene2134;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YP_RS10710;old_locus_tag=YP2061%2CYP_2061 NC_005810.1 Protein Homology CDS 2291131 2292528 . + 0 ID=cds2084;Parent=gene2134;Dbxref=Genbank:WP_002210578.1;Name=WP_002210578.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase class II;protein_id=WP_002210578.1;transl_table=11 NC_005810.1 RefSeq gene 2292608 2293543 . - . ID=gene2135;Name=YP_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10715;old_locus_tag=YP2062%2CYP_2062 NC_005810.1 Protein Homology CDS 2292608 2293543 . - 0 ID=cds2085;Parent=gene2135;Dbxref=Genbank:WP_002227921.1;Name=WP_002227921.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_002227921.1;transl_table=11 NC_005810.1 RefSeq gene 2293748 2294599 . - . ID=gene2136;Name=YP_RS10720;end_range=2294599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10720;old_locus_tag=YP2063;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 2293748 2294599 . - 0 ID=cds2086;Parent=gene2136;end_range=2294599,.;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2293928..2293930)%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 2294804 2296021 . + . ID=gene2137;Name=YP_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10725;old_locus_tag=YP2064%2CYP_2064 NC_005810.1 Protein Homology CDS 2294804 2296021 . + 0 ID=cds2087;Parent=gene2137;Dbxref=Genbank:WP_002210576.1;Name=WP_002210576.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210576.1;transl_table=11 NC_005810.1 RefSeq gene 2296245 2296913 . + . ID=gene2138;Name=YP_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10730;old_locus_tag=YP2065%2CYP_2065 NC_005810.1 Protein Homology CDS 2296245 2296913 . + 0 ID=cds2088;Parent=gene2138;Dbxref=Genbank:WP_002210575.1;Name=WP_002210575.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002210575.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2296934 2297044 . + . ID=id414;Note=degenerate repeat region containing 3 copies of a 37bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2296934 2297041 . + . ID=id415;Note=degenerate repeat region containing 6 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2297073 2298353 . - . ID=gene2139;Name=YP_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10735;old_locus_tag=YP2066%2CYP_2066 NC_005810.1 Protein Homology CDS 2297073 2298353 . - 0 ID=cds2089;Parent=gene2139;Dbxref=Genbank:WP_002210574.1;Name=WP_002210574.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_002210574.1;transl_table=11 NC_005810.1 RefSeq gene 2298721 2298831 . - . ID=gene2140;Name=YP_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10740 NC_005810.1 Protein Homology CDS 2298721 2298831 . - 0 ID=cds2090;Parent=gene2140;Dbxref=Genbank:WP_002214514.1;Name=WP_002214514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214514.1;transl_table=11 NC_005810.1 RefSeq gene 2298953 2299969 . - . ID=gene2141;Name=YP_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10745;old_locus_tag=YP2067%2CYP_2067 NC_005810.1 Protein Homology CDS 2298953 2299969 . - 0 ID=cds2091;Parent=gene2141;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NC_005810.1 RefSeq gene 2300033 2300503 . - . ID=gene2142;Name=YP_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10750;old_locus_tag=YP2068%2CYP_2068 NC_005810.1 Protein Homology CDS 2300033 2300503 . - 0 ID=cds2092;Parent=gene2142;Dbxref=Genbank:WP_002211037.1;Name=WP_002211037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211037.1;transl_table=11 NC_005810.1 RefSeq gene 2300647 2300997 . - . ID=gene2143;Name=YP_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10755;old_locus_tag=YP2069 NC_005810.1 Protein Homology CDS 2300647 2300997 . - 0 ID=cds2093;Parent=gene2143;Dbxref=Genbank:WP_002211036.1;Name=WP_002211036.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211036.1;transl_table=11 NC_005810.1 RefSeq gene 2301436 2302467 . + . ID=gene2144;Name=YP_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10760;old_locus_tag=YP2071%2CYP_2071 NC_005810.1 Protein Homology CDS 2301436 2302467 . + 0 ID=cds2094;Parent=gene2144;Dbxref=Genbank:WP_011171862.1;Name=WP_011171862.1;gbkey=CDS;product=myristoyl transferase;protein_id=WP_011171862.1;transl_table=11 NC_005810.1 RefSeq gene 2302471 2303292 . + . ID=gene2145;Name=YP_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10765;old_locus_tag=YP2072%2CYP_2072 NC_005810.1 Protein Homology CDS 2302471 2303292 . + 0 ID=cds2095;Parent=gene2145;Dbxref=Genbank:WP_002211034.1;Name=WP_002211034.1;gbkey=CDS;product=sulfonate ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NC_005810.1 RefSeq gene 2303302 2304120 . + . ID=gene2146;Name=YP_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10770;old_locus_tag=YP2073%2CYP_2073 NC_005810.1 Protein Homology CDS 2303302 2304120 . + 0 ID=cds2096;Parent=gene2146;Dbxref=Genbank:WP_011171863.1;Name=WP_011171863.1;gbkey=CDS;product=sulfonate ABC transporter ATP-binding protein;protein_id=WP_011171863.1;transl_table=11 NC_005810.1 RefSeq gene 2304545 2306035 . - . ID=gene2147;Name=YP_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10775;old_locus_tag=YP2074%2CYP_2074 NC_005810.1 Protein Homology CDS 2304545 2306035 . - 0 ID=cds2097;Parent=gene2147;Dbxref=Genbank:WP_002223601.1;Name=WP_002223601.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_002223601.1;transl_table=11 NC_005810.1 RefSeq gene 2306241 2307674 . + . ID=gene2148;Name=YP_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10780;old_locus_tag=YP2075%2CYP_2075 NC_005810.1 Protein Homology CDS 2306241 2307674 . + 0 ID=cds2098;Parent=gene2148;Dbxref=Genbank:WP_002211031.1;Name=WP_002211031.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211031.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2306743 2306778 . + . ID=id416;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2307679 2310750 . + . ID=gene2149;Name=YP_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10785;old_locus_tag=YP2076%2CYP_2076 NC_005810.1 Protein Homology CDS 2307679 2310750 . + 0 ID=cds2099;Parent=gene2149;Dbxref=Genbank:WP_002211030.1;Name=WP_002211030.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211030.1;transl_table=11 NC_005810.1 RefSeq gene 2310747 2313287 . + . ID=gene2150;Name=YP_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10790;old_locus_tag=YP2077%2CYP_2077 NC_005810.1 Protein Homology CDS 2310747 2313287 . + 0 ID=cds2100;Parent=gene2150;Dbxref=Genbank:WP_002211029.1;Name=WP_002211029.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211029.1;transl_table=11 NC_005810.1 RefSeq gene 2313456 2314250 . - . ID=gene2151;Name=YP_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10795;old_locus_tag=YP2078%2CYP_2078 NC_005810.1 Protein Homology CDS 2313456 2314250 . - 0 ID=cds2101;Parent=gene2151;Dbxref=Genbank:WP_002220345.1;Name=WP_002220345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220345.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2314431 2314493 . + . ID=id417;Note=degenerate repeat region containing 9 copies of a 7bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2314852 2316519 . + . ID=gene2152;Name=YP_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10800;old_locus_tag=YP2079%2CYP_2079 NC_005810.1 Protein Homology CDS 2314852 2316519 . + 0 ID=cds2102;Parent=gene2152;Dbxref=Genbank:WP_002211027.1;Name=WP_002211027.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211027.1;transl_table=11 NC_005810.1 RefSeq gene 2316581 2316868 . + . ID=gene2153;Name=YP_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10805;old_locus_tag=YP2080 NC_005810.1 Protein Homology CDS 2316581 2316868 . + 0 ID=cds2103;Parent=gene2153;Dbxref=Genbank:WP_029793741.1;Name=WP_029793741.1;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;gbkey=CDS;product=acetolactate synthase 1 regulatory subunit;protein_id=WP_029793741.1;transl_table=11 NC_005810.1 RefSeq gene 2316935 2317609 . - . ID=gene2154;Name=YP_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10810;old_locus_tag=YP2081%2CYP_2081 NC_005810.1 Protein Homology CDS 2316935 2317609 . - 0 ID=cds2104;Parent=gene2154;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11 NC_005810.1 RefSeq gene 2317740 2319125 . - . ID=gene2155;Name=YP_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10815 NC_005810.1 Protein Homology CDS 2317740 2319125 . - 0 ID=cds2105;Parent=gene2155;Dbxref=Genbank:WP_002227914.1;Name=WP_002227914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227914.1;transl_table=11 NC_005810.1 RefSeq gene 2319125 2320136 . - . ID=gene2156;Name=YP_RS10820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10820;pseudo=true NC_005810.1 Protein Homology CDS 2319125 2320136 . - 0 ID=cds2106;Parent=gene2156;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2320682 2322127 . - . ID=gene2157;Name=YP_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10825;old_locus_tag=YP2083%2CYP_2083 NC_005810.1 Protein Homology CDS 2320682 2322127 . - 0 ID=cds2107;Parent=gene2157;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2322072 2322107 . + . ID=id418;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2322368 2322886 . + . ID=gene2158;Name=YP_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10830;old_locus_tag=YP2084 NC_005810.1 Protein Homology CDS 2322368 2322886 . + 0 ID=cds2108;Parent=gene2158;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11 NC_005810.1 RefSeq gene 2322959 2323711 . + . ID=gene2159;Name=YP_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10835;old_locus_tag=YP2085%2CYP_2085 NC_005810.1 Protein Homology CDS 2322959 2323711 . + 0 ID=cds2109;Parent=gene2159;Dbxref=Genbank:WP_002211022.1;Name=WP_002211022.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate and nitrate reduction regulatory protein;protein_id=WP_002211022.1;transl_table=11 NC_005810.1 RefSeq gene 2323847 2324804 . + . ID=gene2160;Name=YP_RS10840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10840;old_locus_tag=YP2086%2CYP_2086;pseudo=true NC_005810.1 Protein Homology CDS 2323847 2324804 . + 0 ID=cds2110;Parent=gene2160;Note=with UspC and UspD is involved in resistance to UV irradiation;exception=annotated by transcript or proteomic data;gbkey=CDS;product=universal stress protein UspE;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 2324859 2325033 . + . ID=id419;gbkey=repeat_region NC_005810.1 RefSeq gene 2325079 2326473 . - . ID=gene2161;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YP_RS10845;old_locus_tag=YP2087%2CYP_2087 NC_005810.1 Protein Homology CDS 2325079 2326473 . - 0 ID=cds2111;Parent=gene2161;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11 NC_005810.1 RefSeq gene 2326546 2328072 . - . ID=gene2162;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YP_RS10850;old_locus_tag=YP2088%2CYP_2088 NC_005810.1 Protein Homology CDS 2326546 2328072 . - 0 ID=cds2112;Parent=gene2162;Dbxref=Genbank:WP_002211019.1;Name=WP_002211019.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_002211019.1;transl_table=11 NC_005810.1 RefSeq gene 2328193 2328396 . - . ID=gene2163;Name=YP_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10855;old_locus_tag=YP2089%2CYP_2089 NC_005810.1 Protein Homology CDS 2328193 2328396 . - 0 ID=cds2113;Parent=gene2163;Dbxref=Genbank:WP_002227912.1;Name=WP_002227912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227912.1;transl_table=11 NC_005810.1 RefSeq gene 2328602 2329555 . + . ID=gene2164;Name=YP_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10860;old_locus_tag=YP2090%2CYP_2090 NC_005810.1 Protein Homology CDS 2328602 2329555 . + 0 ID=cds2114;Parent=gene2164;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11 NC_005810.1 RefSeq gene 2329825 2331216 . + . ID=gene2165;Name=YP_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10865;old_locus_tag=YP2091%2CYP_2091 NC_005810.1 Protein Homology CDS 2329825 2331216 . + 0 ID=cds2115;Parent=gene2165;Dbxref=Genbank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_002211017.1;transl_table=11 NC_005810.1 RefSeq gene 2331240 2331656 . - . ID=gene2166;Name=YP_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10870;old_locus_tag=YP2092%2CYP_2092 NC_005810.1 Protein Homology CDS 2331240 2331656 . - 0 ID=cds2116;Parent=gene2166;Dbxref=Genbank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NC_005810.1 RefSeq gene 2331953 2332699 . + . ID=gene2167;Name=YP_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10875;old_locus_tag=YP2093%2CYP_2093 NC_005810.1 Protein Homology CDS 2331953 2332699 . + 0 ID=cds2117;Parent=gene2167;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11 NC_005810.1 RefSeq gene 2332748 2333524 . + . ID=gene2168;Name=YP_RS10880;end_range=2333524,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10880;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 2332748 2333524 . + 0 ID=cds2118;Parent=gene2168;end_range=2333524,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=sensor protein RstB;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 2333525 2335481 . + . ID=id420;gbkey=repeat_region NC_005810.1 RefSeq region 2333526 2335478 . - . ID=id421;gbkey=mobile_element NC_005810.1 RefSeq gene 2333612 2334634 . + . ID=gene2169;Name=YP_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10885;old_locus_tag=YP2095%2CYP_2095 NC_005810.1 Protein Homology CDS 2333612 2334634 . + 0 ID=cds2119;Parent=gene2169;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 2334634 2335413 . + . ID=gene2170;Name=YP_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10890;old_locus_tag=YP2096%2CYP_2096 NC_005810.1 Protein Homology CDS 2334634 2335413 . + 0 ID=cds2120;Parent=gene2170;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 2335479 2335964 . + . ID=gene2171;Name=YP_RS10895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS10895;partial=true;pseudo=true;start_range=.,2335479 NC_005810.1 Protein Homology CDS 2335479 2335964 . + 0 ID=cds2121;Parent=gene2171;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=sensor protein RstB;pseudo=true;start_range=.,2335479;transl_table=11 NC_005810.1 RefSeq repeat_region 2335992 2336023 . + . ID=id422;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2336058 2337557 . + . ID=gene2172;Name=YP_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10900;old_locus_tag=YP2097%2CYP_2097 NC_005810.1 Protein Homology CDS 2336058 2337557 . + 0 ID=cds2122;Parent=gene2172;Dbxref=Genbank:WP_002211014.1;Name=WP_002211014.1;gbkey=CDS;product=peptidase M32;protein_id=WP_002211014.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2337569 2338285 . + . ID=id423;gbkey=repeat_region NC_005810.1 RefSeq region 2337571 2338282 . - . ID=id424;gbkey=mobile_element NC_005810.1 RefSeq gene 2337679 2338137 . - . ID=gene2173;Name=YP_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10905;old_locus_tag=YP2098%2CYP_2098 NC_005810.1 Protein Homology CDS 2337679 2338137 . - 0 ID=cds2123;Parent=gene2173;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 2338127 2338297 . - . ID=gene2174;Name=YP_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10910 NC_005810.1 Protein Homology CDS 2338127 2338297 . - 0 ID=cds2124;Parent=gene2174;Dbxref=Genbank:WP_025470768.1;Name=WP_025470768.1;gbkey=CDS;product=transposase;protein_id=WP_025470768.1;transl_table=11 NC_005810.1 RefSeq gene 2339106 2341730 . + . ID=gene2175;Name=YP_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10915;old_locus_tag=YP2099%2CYP_2099 NC_005810.1 Protein Homology CDS 2339106 2341730 . + 0 ID=cds2125;Parent=gene2175;Dbxref=Genbank:WP_002211013.1;Name=WP_002211013.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_002211013.1;transl_table=11 NC_005810.1 RefSeq gene 2341733 2342089 . + . ID=gene2176;Name=YP_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10920;old_locus_tag=YP2100%2CYP_2100 NC_005810.1 Protein Homology CDS 2341733 2342089 . + 0 ID=cds2126;Parent=gene2176;Dbxref=Genbank:WP_002227910.1;Name=WP_002227910.1;gbkey=CDS;product=DNA gyrase;protein_id=WP_002227910.1;transl_table=11 NC_005810.1 RefSeq gene 2342193 2342351 . - . ID=gene2177;Name=YP_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10925;old_locus_tag=YP2101 NC_005810.1 Protein Homology CDS 2342193 2342351 . - 0 ID=cds2127;Parent=gene2177;Dbxref=Genbank:WP_002214618.1;Name=WP_002214618.1;gbkey=CDS;product=invertase;protein_id=WP_002214618.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2342705 2342879 . + . ID=id425;gbkey=repeat_region NC_005810.1 RefSeq gene 2342916 2343494 . - . ID=gene2178;Name=YP_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10930;old_locus_tag=YP2102%2CYP_2102 NC_005810.1 Protein Homology CDS 2342916 2343494 . - 0 ID=cds2128;Parent=gene2178;Dbxref=Genbank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211011.1;transl_table=11 NC_005810.1 RefSeq gene 2343520 2344074 . - . ID=gene2179;Name=YP_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10935;old_locus_tag=YP2103%2CYP_2103 NC_005810.1 Protein Homology CDS 2343520 2344074 . - 0 ID=cds2129;Parent=gene2179;Dbxref=Genbank:WP_002211010.1;Name=WP_002211010.1;gbkey=CDS;product=cytochrome B561;protein_id=WP_002211010.1;transl_table=11 NC_005810.1 RefSeq gene 2344469 2344681 . + . ID=gene2180;Name=YP_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10940;old_locus_tag=YP2104%2CYP_2104 NC_005810.1 Protein Homology CDS 2344469 2344681 . + 0 ID=cds2130;Parent=gene2180;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2344544 2344575 . + . ID=id426;Note=exact repeat region containing 2 copies of a 16 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2344678 2344974 . + . ID=gene2181;Name=YP_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10945;old_locus_tag=YP2105%2CYP_2105 NC_005810.1 Protein Homology CDS 2344678 2344974 . + 0 ID=cds2131;Parent=gene2181;Dbxref=Genbank:WP_011171867.1;Name=WP_011171867.1;gbkey=CDS;product=acid-shock protein;protein_id=WP_011171867.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2344778 2344801 . + . ID=id427;gbkey=repeat_region NC_005810.1 RefSeq gene 2345308 2346144 . + . ID=gene2182;Name=YP_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10950;old_locus_tag=YP2106%2CYP_2106 NC_005810.1 Protein Homology CDS 2345308 2346144 . + 0 ID=cds2132;Parent=gene2182;Dbxref=Genbank:WP_002224556.1;Name=WP_002224556.1;gbkey=CDS;product=peptidase;protein_id=WP_002224556.1;transl_table=11 NC_005810.1 RefSeq gene 2346200 2346523 . - . ID=gene2183;Name=YP_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10955;old_locus_tag=YP2107%2CYP_2107 NC_005810.1 Protein Homology CDS 2346200 2346523 . - 0 ID=cds2133;Parent=gene2183;Dbxref=Genbank:WP_002211007.1;Name=WP_002211007.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211007.1;transl_table=11 NC_005810.1 RefSeq gene 2346520 2346849 . - . ID=gene2184;Name=YP_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10960;old_locus_tag=YP2108%2CYP_2108 NC_005810.1 Protein Homology CDS 2346520 2346849 . - 0 ID=cds2134;Parent=gene2184;Dbxref=Genbank:WP_002214609.1;Name=WP_002214609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214609.1;transl_table=11 NC_005810.1 RefSeq gene 2347188 2351030 . - . ID=gene2185;Name=YP_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10965;old_locus_tag=YP2109%2CYP_2109 NC_005810.1 Protein Homology CDS 2347188 2351030 . - 0 ID=cds2135;Parent=gene2185;Dbxref=Genbank:WP_002214608.1;Name=WP_002214608.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_002214608.1;transl_table=11 NC_005810.1 RefSeq gene 2351476 2352081 . + . ID=gene2186;Name=YP_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10970;old_locus_tag=YP2110%2CYP_2110 NC_005810.1 Protein Homology CDS 2351476 2352081 . + 0 ID=cds2136;Parent=gene2186;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NC_005810.1 RefSeq gene 2352202 2353158 . - . ID=gene2187;Name=YP_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10975;old_locus_tag=YP2111%2CYP_2111 NC_005810.1 Protein Homology CDS 2352202 2353158 . - 0 ID=cds2137;Parent=gene2187;Dbxref=Genbank:WP_002211003.1;Name=WP_002211003.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211003.1;transl_table=11 NC_005810.1 RefSeq gene 2353368 2354759 . + . ID=gene2188;Name=YP_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10980;old_locus_tag=YP2112%2CYP_2112 NC_005810.1 Protein Homology CDS 2353368 2354759 . + 0 ID=cds2138;Parent=gene2188;Dbxref=Genbank:WP_002211002.1;Name=WP_002211002.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_002211002.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2354865 2354900 . + . ID=id428;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2354978 2355349 . - . ID=gene2189;Name=YP_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10985;old_locus_tag=YP2113%2CYP_2113 NC_005810.1 Protein Homology CDS 2354978 2355349 . - 0 ID=cds2139;Parent=gene2189;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11 NC_005810.1 RefSeq gene 2355359 2355553 . - . ID=gene2190;Name=YP_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10990 NC_005810.1 Protein Homology CDS 2355359 2355553 . - 0 ID=cds2140;Parent=gene2190;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11 NC_005810.1 RefSeq gene 2355550 2358246 . - . ID=gene2191;Name=YP_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS10995;old_locus_tag=YP2114%2CYP_2114 NC_005810.1 Protein Homology CDS 2355550 2358246 . - 0 ID=cds2141;Parent=gene2191;Dbxref=Genbank:WP_011171869.1;Name=WP_011171869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171869.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2355604 2355639 . + . ID=id429;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2358512 2359504 . + . ID=gene2192;Name=YP_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11000;old_locus_tag=YP2115%2CYP_2115 NC_005810.1 Protein Homology CDS 2358512 2359504 . + 0 ID=cds2142;Parent=gene2192;Dbxref=Genbank:WP_002210998.1;Name=WP_002210998.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210998.1;transl_table=11 NC_005810.1 RefSeq gene 2359574 2360026 . + . ID=gene2193;Name=YP_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11005;old_locus_tag=YP2116%2CYP_2116 NC_005810.1 Protein Homology CDS 2359574 2360026 . + 0 ID=cds2143;Parent=gene2193;Dbxref=Genbank:WP_002214605.1;Name=WP_002214605.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_002214605.1;transl_table=11 NC_005810.1 RefSeq gene 2360084 2360395 . - . ID=gene2194;Name=YP_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11010;old_locus_tag=YP2117 NC_005810.1 Protein Homology CDS 2360084 2360395 . - 0 ID=cds2144;Parent=gene2194;Dbxref=Genbank:WP_002210996.1;Name=WP_002210996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210996.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2360315 2360350 . + . ID=id430;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2360487 2360520 . + . ID=id431;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2360710 2361369 . + . ID=gene2195;Name=YP_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11015;old_locus_tag=YP2118%2CYP_2118 NC_005810.1 Protein Homology CDS 2360710 2361369 . + 0 ID=cds2145;Parent=gene2195;Dbxref=Genbank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002210995.1;transl_table=11 NC_005810.1 RefSeq gene 2361429 2361761 . - . ID=gene2196;Name=YP_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11020;old_locus_tag=YP2119%2CYP_2119 NC_005810.1 Protein Homology CDS 2361429 2361761 . - 0 ID=cds2146;Parent=gene2196;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11 NC_005810.1 RefSeq gene 2362240 2365773 . + . ID=gene2197;Name=YP_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11025;old_locus_tag=YP2120%2CYP_2120 NC_005810.1 Protein Homology CDS 2362240 2365773 . + 0 ID=cds2147;Parent=gene2197;Dbxref=Genbank:WP_002210993.1;Name=WP_002210993.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_002210993.1;transl_table=11 NC_005810.1 RefSeq gene 2366048 2366989 . + . ID=gene2198;Name=YP_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11030;old_locus_tag=YP2121%2CYP_2121 NC_005810.1 Protein Homology CDS 2366048 2366989 . + 0 ID=cds2148;Parent=gene2198;Dbxref=Genbank:WP_002210992.1;Name=WP_002210992.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_002210992.1;transl_table=11 NC_005810.1 RefSeq gene 2367260 2368264 . + . ID=gene2199;Name=YP_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11035;old_locus_tag=YP2122%2CYP_2122 NC_005810.1 Protein Homology CDS 2367260 2368264 . + 0 ID=cds2149;Parent=gene2199;Dbxref=Genbank:WP_002210991.1;Name=WP_002210991.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002210991.1;transl_table=11 NC_005810.1 RefSeq gene 2368576 2369415 . + . ID=gene2200;Name=YP_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11040;old_locus_tag=YP2123%2CYP_2123 NC_005810.1 Protein Homology CDS 2368576 2369415 . + 0 ID=cds2150;Parent=gene2200;Dbxref=Genbank:WP_002210990.1;Name=WP_002210990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210990.1;transl_table=11 NC_005810.1 RefSeq gene 2369789 2370772 . - . ID=gene2201;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YP_RS11045;old_locus_tag=YP2125%2CYP_2125 NC_005810.1 Protein Homology CDS 2369789 2370772 . - 0 ID=cds2151;Parent=gene2201;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NC_005810.1 RefSeq gene 2371015 2372631 . - . ID=gene2202;Name=YP_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11050;old_locus_tag=YP2126%2CYP_2126 NC_005810.1 Protein Homology CDS 2371015 2372631 . - 0 ID=cds2152;Parent=gene2202;Dbxref=Genbank:WP_002210987.1;Name=WP_002210987.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11 NC_005810.1 RefSeq gene 2373072 2373779 . + . ID=gene2203;Name=YP_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11055;old_locus_tag=YP2127%2CYP_2127 NC_005810.1 Protein Homology CDS 2373072 2373779 . + 0 ID=cds2153;Parent=gene2203;Dbxref=Genbank:WP_002220315.1;Name=WP_002220315.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_002220315.1;transl_table=11 NC_005810.1 RefSeq gene 2373821 2374795 . - . ID=gene2204;Name=YP_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11060;old_locus_tag=YP2128%2CYP_2128 NC_005810.1 Protein Homology CDS 2373821 2374795 . - 0 ID=cds2154;Parent=gene2204;Dbxref=Genbank:WP_002210985.1;Name=WP_002210985.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=mandelate racemase;protein_id=WP_002210985.1;transl_table=11 NC_005810.1 RefSeq gene 2374958 2375461 . + . ID=gene2205;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YP_RS11065;old_locus_tag=YP2129%2CYP_2129 NC_005810.1 Protein Homology CDS 2374958 2375461 . + 0 ID=cds2155;Parent=gene2205;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2375560 2376282 . + . ID=id432;gbkey=repeat_region NC_005810.1 RefSeq region 2375569 2376280 . + . ID=id433;gbkey=mobile_element NC_005810.1 RefSeq gene 2375714 2376172 . + . ID=gene2206;Name=YP_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11070;old_locus_tag=YP2130%2CYP_2130 NC_005810.1 Protein Homology CDS 2375714 2376172 . + 0 ID=cds2156;Parent=gene2206;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 2376319 2377896 . - . ID=gene2207;Name=YP_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11075;old_locus_tag=YP2131%2CYP_2131 NC_005810.1 Protein Homology CDS 2376319 2377896 . - 0 ID=cds2157;Parent=gene2207;Dbxref=Genbank:WP_002230917.1;Name=WP_002230917.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230917.1;transl_table=11 NC_005810.1 RefSeq gene 2378232 2378678 . + . ID=gene2208;Name=YP_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11080;old_locus_tag=YP2132%2CYP_2132 NC_005810.1 Protein Homology CDS 2378232 2378678 . + 0 ID=cds2158;Parent=gene2208;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2378716 2378749 . + . ID=id434;Note=exact repeat region containing 2 copies of a 17 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2378740 2379198 . + . ID=gene2209;Name=YP_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11085;old_locus_tag=YP2133%2CYP_2133 NC_005810.1 Protein Homology CDS 2378740 2379198 . + 0 ID=cds2159;Parent=gene2209;Dbxref=Genbank:WP_002210981.1;Name=WP_002210981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210981.1;transl_table=11 NC_005810.1 RefSeq gene 2379208 2380269 . - . ID=gene2210;Name=YP_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11090;old_locus_tag=YP2134%2CYP_2134 NC_005810.1 Protein Homology CDS 2379208 2380269 . - 0 ID=cds2160;Parent=gene2210;Dbxref=Genbank:WP_002210980.1;Name=WP_002210980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210980.1;transl_table=11 NC_005810.1 RefSeq gene 2380266 2381663 . - . ID=gene2211;Name=YP_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11095;old_locus_tag=YP2135%2CYP_2135 NC_005810.1 Protein Homology CDS 2380266 2381663 . - 0 ID=cds2161;Parent=gene2211;Dbxref=Genbank:WP_002210979.1;Name=WP_002210979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210979.1;transl_table=11 NC_005810.1 RefSeq gene 2381644 2381883 . - . ID=gene2212;Name=YP_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11100;old_locus_tag=YP2136%2CYP_2136 NC_005810.1 Protein Homology CDS 2381644 2381883 . - 0 ID=cds2162;Parent=gene2212;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11 NC_005810.1 RefSeq gene 2381971 2382330 . - . ID=gene2213;Name=YP_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11105;old_locus_tag=YP2137%2CYP_2137 NC_005810.1 Protein Homology CDS 2381971 2382330 . - 0 ID=cds2163;Parent=gene2213;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11 NC_005810.1 RefSeq gene 2382330 2382557 . - . ID=gene2214;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YP_RS11110;old_locus_tag=YP2138%2CYP_2138 NC_005810.1 Protein Homology CDS 2382330 2382557 . - 0 ID=cds2164;Parent=gene2214;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11 NC_005810.1 RefSeq gene 2382719 2383384 . - . ID=gene2215;Name=YP_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11115;old_locus_tag=YP2139%2CYP_2139 NC_005810.1 Protein Homology CDS 2382719 2383384 . - 0 ID=cds2165;Parent=gene2215;Dbxref=Genbank:WP_002210975.1;Name=WP_002210975.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_002210975.1;transl_table=11 NC_005810.1 RefSeq gene 2383629 2384657 . + . ID=gene2216;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YP_RS11120;old_locus_tag=YP2140%2CYP_2140 NC_005810.1 Protein Homology CDS 2383629 2384657 . + 0 ID=cds2166;Parent=gene2216;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2384711 2385432 . + . ID=id435;gbkey=repeat_region NC_005810.1 RefSeq region 2384714 2385425 . - . ID=id436;gbkey=mobile_element NC_005810.1 RefSeq gene 2384822 2385280 . - . ID=gene2217;Name=YP_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11125;old_locus_tag=YP2141%2CYP_2141 NC_005810.1 Protein Homology CDS 2384822 2385280 . - 0 ID=cds2167;Parent=gene2217;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 2385270 2385437 . - . ID=gene2218;Name=YP_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11130 NC_005810.1 Protein Homology CDS 2385270 2385437 . - 0 ID=cds2168;Parent=gene2218;Dbxref=Genbank:WP_002430114.1;Name=WP_002430114.1;gbkey=CDS;product=invasin;protein_id=WP_002430114.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2385600 2385639 . + . ID=id437;Note=exact repeat region containing 2 copies of a 20 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2385624 2385809 . + . ID=gene2219;Name=YP_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11135;old_locus_tag=YP2143%2CYP_2143 NC_005810.1 Protein Homology CDS 2385624 2385809 . + 0 ID=cds2169;Parent=gene2219;Dbxref=Genbank:WP_002215913.1;Name=WP_002215913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215913.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2385760 2385780 . + . ID=id438;gbkey=repeat_region NC_005810.1 RefSeq gene 2385945 2387591 . + . ID=gene2220;Name=YP_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11140;old_locus_tag=YP2144%2CYP_2144 NC_005810.1 Protein Homology CDS 2385945 2387591 . + 0 ID=cds2170;Parent=gene2220;Dbxref=Genbank:WP_002210973.1;Name=WP_002210973.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210973.1;transl_table=11 NC_005810.1 RefSeq gene 2387588 2388553 . + . ID=gene2221;Name=YP_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11145;old_locus_tag=YP2145%2CYP_2145 NC_005810.1 Protein Homology CDS 2387588 2388553 . + 0 ID=cds2171;Parent=gene2221;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11 NC_005810.1 RefSeq gene 2388540 2389430 . + . ID=gene2222;Name=YP_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11150;old_locus_tag=YP2146%2CYP_2146 NC_005810.1 Protein Homology CDS 2388540 2389430 . + 0 ID=cds2172;Parent=gene2222;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11 NC_005810.1 RefSeq gene 2389430 2390422 . + . ID=gene2223;Name=YP_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11155;old_locus_tag=YP2147%2CYP_2147 NC_005810.1 Protein Homology CDS 2389430 2390422 . + 0 ID=cds2173;Parent=gene2223;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11 NC_005810.1 RefSeq gene 2390422 2391237 . + . ID=gene2224;Name=YP_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11160;old_locus_tag=YP2148%2CYP_2148 NC_005810.1 Protein Homology CDS 2390422 2391237 . + 0 ID=cds2174;Parent=gene2224;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11 NC_005810.1 RefSeq gene 2391627 2392907 . + . ID=gene2225;Name=YP_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11165;old_locus_tag=YP2149%2CYP_2149 NC_005810.1 Protein Homology CDS 2391627 2392907 . + 0 ID=cds2175;Parent=gene2225;Dbxref=Genbank:WP_002210967.1;Name=WP_002210967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210967.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2391828 2391863 . + . ID=id439;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2393550 2395055 . + . ID=gene2226;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=YP_RS11170;old_locus_tag=YP2150%2CYP_2150 NC_005810.1 Protein Homology CDS 2393550 2395055 . + 0 ID=cds2176;Parent=gene2226;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11 NC_005810.1 RefSeq gene 2395310 2395900 . + . ID=gene2227;Name=YP_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11175;old_locus_tag=YP2151%2CYP_2151 NC_005810.1 Protein Homology CDS 2395310 2395900 . + 0 ID=cds2177;Parent=gene2227;Dbxref=Genbank:WP_002210965.1;Name=WP_002210965.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210965.1;transl_table=11 NC_005810.1 RefSeq gene 2396146 2396409 . + . ID=gene2228;Name=YP_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11180;old_locus_tag=YP2152%2CYP_2152 NC_005810.1 Protein Homology CDS 2396146 2396409 . + 0 ID=cds2178;Parent=gene2228;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11 NC_005810.1 RefSeq gene 2396654 2397259 . + . ID=gene2229;Name=YP_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11185;old_locus_tag=YP2153%2CYP_2153 NC_005810.1 Protein Homology CDS 2396654 2397259 . + 0 ID=cds2179;Parent=gene2229;Dbxref=Genbank:WP_002210962.1;Name=WP_002210962.1;gbkey=CDS;product=glutathionine S-transferase;protein_id=WP_002210962.1;transl_table=11 NC_005810.1 RefSeq gene 2397319 2398179 . - . ID=gene2230;Name=YP_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11190;old_locus_tag=YP2154%2CYP_2154 NC_005810.1 Protein Homology CDS 2397319 2398179 . - 0 ID=cds2180;Parent=gene2230;Dbxref=Genbank:WP_002210961.1;Name=WP_002210961.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_002210961.1;transl_table=11 NC_005810.1 RefSeq gene 2398334 2399608 . - . ID=gene2231;Name=YP_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11195;old_locus_tag=YP2155%2CYP_2155 NC_005810.1 Protein Homology CDS 2398334 2399608 . - 0 ID=cds2181;Parent=gene2231;Dbxref=Genbank:WP_002210960.1;Name=WP_002210960.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_002210960.1;transl_table=11 NC_005810.1 RefSeq gene 2399790 2400443 . - . ID=gene2232;Name=YP_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11200;old_locus_tag=YP2156%2CYP_2156 NC_005810.1 Protein Homology CDS 2399790 2400443 . - 0 ID=cds2182;Parent=gene2232;Dbxref=Genbank:WP_002210959.1;Name=WP_002210959.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NC_005810.1 RefSeq gene 2400534 2400848 . - . ID=gene2233;Name=YP_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11205;old_locus_tag=YP2157 NC_005810.1 Protein Homology CDS 2400534 2400848 . - 0 ID=cds2183;Parent=gene2233;Dbxref=Genbank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002218323.1;transl_table=11 NC_005810.1 RefSeq gene 2400906 2402018 . - . ID=gene2234;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=YP_RS11210;old_locus_tag=YP2158%2CYP_2158 NC_005810.1 Protein Homology CDS 2400906 2402018 . - 0 ID=cds2184;Parent=gene2234;Dbxref=Genbank:WP_002218322.1;Name=WP_002218322.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NC_005810.1 RefSeq gene 2402574 2403041 . + . ID=gene2235;Name=YP_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11215;old_locus_tag=YP2159%2CYP_2159 NC_005810.1 Protein Homology CDS 2402574 2403041 . + 0 ID=cds2185;Parent=gene2235;Dbxref=Genbank:WP_002210956.1;Name=WP_002210956.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210956.1;transl_table=11 NC_005810.1 RefSeq gene 2403185 2403616 . - . ID=gene2236;Name=YP_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11220;old_locus_tag=YP2160%2CYP_2160 NC_005810.1 Protein Homology CDS 2403185 2403616 . - 0 ID=cds2186;Parent=gene2236;Dbxref=Genbank:WP_002210955.1;Name=WP_002210955.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_002210955.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 2403677 2403694 . - . ID=id440;Dbxref=CollecTF:EXPSITE_000076b0;Note=Transcription factor binding site for NP_993114. Originally reported in Yersinia pestis biovar Microtus strain 201~Evidence of regulation for: YP_2160;gbkey=protein_bind NC_005810.1 RefSeq gene 2404414 2405310 . - . ID=gene2237;Name=YP_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11225;old_locus_tag=YP2161%2CYP_2161 NC_005810.1 Protein Homology CDS 2404414 2405310 . - 0 ID=cds2187;Parent=gene2237;Dbxref=Genbank:WP_002210954.1;Name=WP_002210954.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210954.1;transl_table=11 NC_005810.1 RefSeq gene 2405442 2405681 . - . ID=gene2238;Name=YP_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11230;old_locus_tag=YP2162 NC_005810.1 Protein Homology CDS 2405442 2405681 . - 0 ID=cds2188;Parent=gene2238;Dbxref=Genbank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210953.1;transl_table=11 NC_005810.1 RefSeq gene 2405855 2407492 . + . ID=gene2239;Name=YP_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11235;old_locus_tag=YP2163%2CYP_2163 NC_005810.1 Protein Homology CDS 2405855 2407492 . + 0 ID=cds2189;Parent=gene2239;Dbxref=Genbank:WP_002210952.1;Name=WP_002210952.1;gbkey=CDS;product=metal dependent hydrolase;protein_id=WP_002210952.1;transl_table=11 NC_005810.1 RefSeq gene 2407715 2408314 . + . ID=gene2240;Name=YP_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11240;old_locus_tag=YP2164%2CYP_2164 NC_005810.1 Protein Homology CDS 2407715 2408314 . + 0 ID=cds2190;Parent=gene2240;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NC_005810.1 RefSeq gene 2408402 2409499 . + . ID=gene2241;Name=YP_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11245;old_locus_tag=YP2165%2CYP_2165 NC_005810.1 Protein Homology CDS 2408402 2409499 . + 0 ID=cds2191;Parent=gene2241;Dbxref=Genbank:WP_002210950.1;Name=WP_002210950.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_002210950.1;transl_table=11 NC_005810.1 RefSeq gene 2409720 2412674 . - . ID=gene2242;Name=YP_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11250;old_locus_tag=YP2166%2CYP_2166 NC_005810.1 Protein Homology CDS 2409720 2412674 . - 0 ID=cds2192;Parent=gene2242;Dbxref=Genbank:WP_002210949.1;Name=WP_002210949.1;gbkey=CDS;product=toxin;protein_id=WP_002210949.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2410976 2410993 . + . ID=id441;gbkey=repeat_region NC_005810.1 RefSeq gene 2412947 2413354 . + . ID=gene2243;Name=YP_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11255;old_locus_tag=YP2167%2CYP_2167 NC_005810.1 Protein Homology CDS 2412947 2413354 . + 0 ID=cds2193;Parent=gene2243;Dbxref=Genbank:WP_002210948.1;Name=WP_002210948.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=lactoylglutathione lyase;protein_id=WP_002210948.1;transl_table=11 NC_005810.1 RefSeq gene 2413433 2414113 . + . ID=gene2244;Name=YP_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11260;old_locus_tag=YP2168%2CYP_2168 NC_005810.1 Protein Homology CDS 2413433 2414113 . + 0 ID=cds2194;Parent=gene2244;Dbxref=Genbank:WP_002210947.1;Name=WP_002210947.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_002210947.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2414150 2414324 . + . ID=id442;gbkey=repeat_region NC_005810.1 RefSeq gene 2414422 2414772 . - . ID=gene2245;Name=YP_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11265;old_locus_tag=YP2169%2CYP_2169 NC_005810.1 Protein Homology CDS 2414422 2414772 . - 0 ID=cds2195;Parent=gene2245;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NC_005810.1 RefSeq gene 2414872 2415093 . - . ID=gene2246;Name=YP_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11270;old_locus_tag=YP2170%2CYP_2170 NC_005810.1 Protein Homology CDS 2414872 2415093 . - 0 ID=cds2196;Parent=gene2246;Dbxref=Genbank:WP_011171872.1;Name=WP_011171872.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171872.1;transl_table=11 NC_005810.1 RefSeq gene 2415212 2416063 . + . ID=gene2247;Name=YP_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11275;old_locus_tag=YP2171%2CYP_2171 NC_005810.1 Protein Homology CDS 2415212 2416063 . + 0 ID=cds2197;Parent=gene2247;Dbxref=Genbank:WP_002210945.1;Name=WP_002210945.1;gbkey=CDS;product=hydrolase;protein_id=WP_002210945.1;transl_table=11 NC_005810.1 RefSeq gene 2416441 2417019 . + . ID=gene2248;Name=YP_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11280;old_locus_tag=YP2172%2CYP_2172 NC_005810.1 Protein Homology CDS 2416441 2417019 . + 0 ID=cds2198;Parent=gene2248;Dbxref=Genbank:WP_002210944.1;Name=WP_002210944.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002210944.1;transl_table=11 NC_005810.1 RefSeq gene 2417546 2418571 . + . ID=gene2249;Name=YP_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11285;old_locus_tag=YP2173%2CYP_2173 NC_005810.1 Protein Homology CDS 2417546 2418571 . + 0 ID=cds2199;Parent=gene2249;Dbxref=Genbank:WP_002210943.1;Name=WP_002210943.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_002210943.1;transl_table=11 NC_005810.1 RefSeq gene 2418660 2419592 . - . ID=gene2250;Name=YP_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11290;old_locus_tag=YP2174%2CYP_2174 NC_005810.1 Protein Homology CDS 2418660 2419592 . - 0 ID=cds2200;Parent=gene2250;Dbxref=Genbank:WP_002210942.1;Name=WP_002210942.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210942.1;transl_table=11 NC_005810.1 RefSeq gene 2419882 2421084 . + . ID=gene2251;Name=YP_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11295;old_locus_tag=YP2175%2CYP_2175 NC_005810.1 Protein Homology CDS 2419882 2421084 . + 0 ID=cds2201;Parent=gene2251;Dbxref=Genbank:WP_002210941.1;Name=WP_002210941.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002210941.1;transl_table=11 NC_005810.1 RefSeq gene 2421564 2422715 . + . ID=gene2252;Name=YP_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11300;old_locus_tag=YP2176%2CYP_2176 NC_005810.1 Protein Homology CDS 2421564 2422715 . + 0 ID=cds2202;Parent=gene2252;Dbxref=Genbank:WP_002230931.1;Name=WP_002230931.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002230931.1;transl_table=11 NC_005810.1 RefSeq gene 2422766 2423422 . - . ID=gene2253;Name=YP_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11305;old_locus_tag=YP2177%2CYP_2177 NC_005810.1 Protein Homology CDS 2422766 2423422 . - 0 ID=cds2203;Parent=gene2253;Dbxref=Genbank:WP_002210939.1;Name=WP_002210939.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_002210939.1;transl_table=11 NC_005810.1 RefSeq gene 2423671 2425044 . + . ID=gene2254;Name=YP_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11310;old_locus_tag=YP2179%2CYP_2179 NC_005810.1 Protein Homology CDS 2423671 2425044 . + 0 ID=cds2204;Parent=gene2254;Dbxref=Genbank:WP_002210937.1;Name=WP_002210937.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_002210937.1;transl_table=11 NC_005810.1 RefSeq gene 2425287 2425363 . + . ID=gene2255;Name=YP_RS11315;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS11315;old_locus_tag=tRNA-Val_1%2CYP_t39 NC_005810.1 tRNAscan-SE tRNA 2425287 2425363 . + . ID=rna46;Parent=gene2255;anticodon=(pos:2425321..2425323);gbkey=tRNA;product=tRNA-Val NC_005810.1 tRNAscan-SE exon 2425287 2425363 . + . ID=id443;Parent=rna46;anticodon=(pos:2425321..2425323);gbkey=tRNA;product=tRNA-Val NC_005810.1 RefSeq gene 2425423 2425499 . + . ID=gene2256;Name=YP_RS11320;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS11320;old_locus_tag=tRNA-Val_2%2CYP_t40 NC_005810.1 tRNAscan-SE tRNA 2425423 2425499 . + . ID=rna47;Parent=gene2256;anticodon=(pos:2425457..2425459);gbkey=tRNA;product=tRNA-Val NC_005810.1 tRNAscan-SE exon 2425423 2425499 . + . ID=id444;Parent=rna47;anticodon=(pos:2425457..2425459);gbkey=tRNA;product=tRNA-Val NC_005810.1 RefSeq gene 2426071 2427483 . + . ID=gene2257;Name=YP_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11325;old_locus_tag=YP2180%2CYP_2180 NC_005810.1 Protein Homology CDS 2426071 2427483 . + 0 ID=cds2205;Parent=gene2257;Dbxref=Genbank:WP_002210936.1;Name=WP_002210936.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002210936.1;transl_table=11 NC_005810.1 RefSeq gene 2427804 2428040 . + . ID=gene2258;Name=YP_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11330;old_locus_tag=YP2181%2CYP_2181 NC_005810.1 Protein Homology CDS 2427804 2428040 . + 0 ID=cds2206;Parent=gene2258;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11 NC_005810.1 RefSeq gene 2428071 2428241 . + . ID=gene2259;Name=YP_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11335 NC_005810.1 Protein Homology CDS 2428071 2428241 . + 0 ID=cds2207;Parent=gene2259;Dbxref=Genbank:WP_002430115.1;Name=WP_002430115.1;gbkey=CDS;product=invasin;protein_id=WP_002430115.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2428079 2428801 . + . ID=id445;gbkey=repeat_region NC_005810.1 RefSeq region 2428086 2428797 . + . ID=id446;gbkey=mobile_element NC_005810.1 RefSeq gene 2428231 2428689 . + . ID=gene2260;Name=YP_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11340;old_locus_tag=YP2182%2CYP_2182 NC_005810.1 Protein Homology CDS 2428231 2428689 . + 0 ID=cds2208;Parent=gene2260;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2429181 2431140 . + . ID=id447;gbkey=repeat_region NC_005810.1 RefSeq region 2429185 2431137 . + . ID=id448;gbkey=mobile_element NC_005810.1 RefSeq gene 2429271 2430293 . + . ID=gene2261;Name=YP_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11345;old_locus_tag=YP2184%2CYP_2184 NC_005810.1 Protein Homology CDS 2429271 2430293 . + 0 ID=cds2209;Parent=gene2261;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 2430293 2431072 . + . ID=gene2262;Name=YP_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11350;old_locus_tag=YP2185%2CYP_2185 NC_005810.1 Protein Homology CDS 2430293 2431072 . + 0 ID=cds2210;Parent=gene2262;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 2431116 2432135 . - . ID=gene2263;Name=YP_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11355 NC_005810.1 Protein Homology CDS 2431116 2432135 . - 0 ID=cds2211;Parent=gene2263;Dbxref=Genbank:WP_002211803.1;Name=WP_002211803.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002211803.1;transl_table=11 NC_005810.1 RefSeq gene 2432406 2432828 . - . ID=gene2264;Name=YP_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11360;old_locus_tag=YP2186%2CYP_2186 NC_005810.1 Protein Homology CDS 2432406 2432828 . - 0 ID=cds2212;Parent=gene2264;Dbxref=Genbank:WP_002211804.1;Name=WP_002211804.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NC_005810.1 RefSeq gene 2432917 2434137 . - . ID=gene2265;Name=YP_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11365;old_locus_tag=YP2187%2CYP_2187 NC_005810.1 Protein Homology CDS 2432917 2434137 . - 0 ID=cds2213;Parent=gene2265;Dbxref=Genbank:WP_002211805.1;Name=WP_002211805.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002211805.1;transl_table=11 NC_005810.1 RefSeq gene 2434134 2435459 . - . ID=gene2266;Name=YP_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11370;old_locus_tag=YP2188%2CYP_2188 NC_005810.1 Protein Homology CDS 2434134 2435459 . - 0 ID=cds2214;Parent=gene2266;Dbxref=Genbank:WP_002211806.1;Name=WP_002211806.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_002211806.1;transl_table=11 NC_005810.1 RefSeq gene 2435434 2436180 . - . ID=gene2267;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YP_RS11375;old_locus_tag=YP2189%2CYP_2189 NC_005810.1 Protein Homology CDS 2435434 2436180 . - 0 ID=cds2215;Parent=gene2267;Dbxref=Genbank:WP_002211807.1;Name=WP_002211807.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002211807.1;transl_table=11 NC_005810.1 RefSeq gene 2436366 2437877 . - . ID=gene2268;Name=YP_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11380;old_locus_tag=YP2190%2CYP_2190 NC_005810.1 Protein Homology CDS 2436366 2437877 . - 0 ID=cds2216;Parent=gene2268;Dbxref=Genbank:WP_002211808.1;Name=WP_002211808.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=Fe-S cluster assembly protein SufB;protein_id=WP_002211808.1;transl_table=11 NC_005810.1 RefSeq gene 2437892 2438263 . - . ID=gene2269;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YP_RS11385;old_locus_tag=YP2191%2CYP_2191 NC_005810.1 Protein Homology CDS 2437892 2438263 . - 0 ID=cds2217;Parent=gene2269;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11 NC_005810.1 RefSeq gene 2438441 2438599 . - . ID=gene2270;Name=YP_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11390;old_locus_tag=YP2192%2CYP_2192 NC_005810.1 Protein Homology CDS 2438441 2438599 . - 0 ID=cds2218;Parent=gene2270;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2438751 2438792 . + . ID=id449;Note=exact repeat region containing 2 copies of a 21 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2438879 2439295 . - . ID=gene2271;Name=YP_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11395;old_locus_tag=YP2193%2CYP_2193 NC_005810.1 Protein Homology CDS 2438879 2439295 . - 0 ID=cds2219;Parent=gene2271;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2439364 2439395 . + . ID=id450;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2439417 2442473 . - . ID=gene2272;Name=YP_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11400;old_locus_tag=YP2194%2CYP_2194 NC_005810.1 Protein Homology CDS 2439417 2442473 . - 0 ID=cds2220;Parent=gene2272;Dbxref=Genbank:WP_002211811.1;Name=WP_002211811.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211811.1;transl_table=11 NC_005810.1 RefSeq gene 2443094 2444197 . + . ID=gene2273;Name=YP_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11405;old_locus_tag=YP2195%2CYP_2195 NC_005810.1 Protein Homology CDS 2443094 2444197 . + 0 ID=cds2221;Parent=gene2273;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11 NC_005810.1 RefSeq gene 2444797 2447181 . - . ID=gene2274;Name=YP_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11410;old_locus_tag=YP2196%2CYP_2196 NC_005810.1 Protein Homology CDS 2444797 2447181 . - 0 ID=cds2222;Parent=gene2274;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NC_005810.1 RefSeq gene 2447518 2448339 . + . ID=gene2275;Name=YP_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11415;old_locus_tag=YP2197%2CYP_2197 NC_005810.1 Protein Homology CDS 2447518 2448339 . + 0 ID=cds2223;Parent=gene2275;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11 NC_005810.1 RefSeq gene 2448496 2449542 . + . ID=gene2276;Name=YP_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11420;old_locus_tag=YP2198%2CYP_2198 NC_005810.1 Protein Homology CDS 2448496 2449542 . + 0 ID=cds2224;Parent=gene2276;Dbxref=Genbank:WP_002211815.1;Name=WP_002211815.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002211815.1;transl_table=11 NC_005810.1 RefSeq gene 2449711 2451174 . - . ID=gene2277;Name=YP_RS11425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS11425;old_locus_tag=YP2199;pseudo=true NC_005810.1 Protein Homology CDS 2449711 2451174 . - 0 ID=cds2225;Parent=gene2277;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2450452..2450454)%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 2451226 2452242 . - . ID=gene2278;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YP_RS11430;old_locus_tag=YP2200%2CYP_2200 NC_005810.1 Protein Homology CDS 2451226 2452242 . - 0 ID=cds2226;Parent=gene2278;Dbxref=Genbank:WP_002211816.1;Name=WP_002211816.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_002211816.1;transl_table=11 NC_005810.1 RefSeq gene 2452367 2452831 . - . ID=gene2279;Name=YP_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11435;old_locus_tag=YP2201%2CYP_2201 NC_005810.1 Protein Homology CDS 2452367 2452831 . - 0 ID=cds2227;Parent=gene2279;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11 NC_005810.1 RefSeq gene 2453111 2453497 . - . ID=gene2280;Name=YP_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11440;old_locus_tag=YP2203%2CYP_2203 NC_005810.1 Protein Homology CDS 2453111 2453497 . - 0 ID=cds2228;Parent=gene2280;Dbxref=Genbank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11 NC_005810.1 RefSeq gene 2453494 2453838 . - . ID=gene2281;Name=YP_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11445;old_locus_tag=YP2204%2CYP_2204 NC_005810.1 Protein Homology CDS 2453494 2453838 . - 0 ID=cds2229;Parent=gene2281;Dbxref=Genbank:WP_002211820.1;Name=WP_002211820.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002211820.1;transl_table=11 NC_005810.1 RefSeq gene 2453835 2455499 . - . ID=gene2282;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YP_RS11450;old_locus_tag=YP2205%2CYP_2205 NC_005810.1 Protein Homology CDS 2453835 2455499 . - 0 ID=cds2230;Parent=gene2282;Dbxref=Genbank:WP_002211821.1;Name=WP_002211821.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_002211821.1;transl_table=11 NC_005810.1 RefSeq gene 2455496 2456401 . - . ID=gene2283;Name=YP_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11455;old_locus_tag=YP2206%2CYP_2206 NC_005810.1 Protein Homology CDS 2455496 2456401 . - 0 ID=cds2231;Parent=gene2283;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11 NC_005810.1 RefSeq gene 2456398 2458401 . - . ID=gene2284;Name=YP_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11460;old_locus_tag=YP2207%2CYP_2207 NC_005810.1 Protein Homology CDS 2456398 2458401 . - 0 ID=cds2232;Parent=gene2284;Dbxref=Genbank:WP_002211823.1;Name=WP_002211823.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_002211823.1;transl_table=11 NC_005810.1 RefSeq gene 2458398 2459381 . - . ID=gene2285;Name=YP_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11465;old_locus_tag=YP2208%2CYP_2208 NC_005810.1 Protein Homology CDS 2458398 2459381 . - 0 ID=cds2233;Parent=gene2285;Dbxref=Genbank:WP_002211824.1;Name=WP_002211824.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002211824.1;transl_table=11 NC_005810.1 RefSeq gene 2459368 2460522 . - . ID=gene2286;Name=YP_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11470;old_locus_tag=YP2209%2CYP_2209 NC_005810.1 Protein Homology CDS 2459368 2460522 . - 0 ID=cds2234;Parent=gene2286;Dbxref=Genbank:WP_002211825.1;Name=WP_002211825.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_002211825.1;transl_table=11 NC_005810.1 RefSeq gene 2460872 2461630 . - . ID=gene2287;Name=YP_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11475;old_locus_tag=YP2210%2CYP_2210 NC_005810.1 Protein Homology CDS 2460872 2461630 . - 0 ID=cds2235;Parent=gene2287;Dbxref=Genbank:WP_016603996.1;Name=WP_016603996.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_016603996.1;transl_table=11 NC_005810.1 RefSeq gene 2461655 2462209 . - . ID=gene2288;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YP_RS11480;old_locus_tag=YP2211%2CYP_2211 NC_005810.1 Protein Homology CDS 2461655 2462209 . - 0 ID=cds2236;Parent=gene2288;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NC_005810.1 RefSeq gene 2462279 2463286 . - . ID=gene2289;Name=YP_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11485;old_locus_tag=YP2212%2CYP_2212 NC_005810.1 Protein Homology CDS 2462279 2463286 . - 0 ID=cds2237;Parent=gene2289;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2463413 2463448 . + . ID=id451;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2463513 2463971 . - . ID=gene2290;Name=YP_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11490;old_locus_tag=YP2213%2CYP_2213 NC_005810.1 Protein Homology CDS 2463513 2463971 . - 0 ID=cds2238;Parent=gene2290;Dbxref=Genbank:WP_002211829.1;Name=WP_002211829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211829.1;transl_table=11 NC_005810.1 RefSeq gene 2464305 2464601 . - . ID=gene2291;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YP_RS11495;old_locus_tag=YP2214%2CYP_2214 NC_005810.1 Protein Homology CDS 2464305 2464601 . - 0 ID=cds2239;Parent=gene2291;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NC_005810.1 RefSeq gene 2464606 2466993 . - . ID=gene2292;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YP_RS11500;old_locus_tag=YP2215%2CYP_2215 NC_005810.1 Protein Homology CDS 2464606 2466993 . - 0 ID=cds2240;Parent=gene2292;Dbxref=Genbank:WP_011171875.1;Name=WP_011171875.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011171875.1;transl_table=11 NC_005810.1 RefSeq gene 2467007 2467990 . - . ID=gene2293;Name=YP_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11505;old_locus_tag=YP2216%2CYP_2216 NC_005810.1 Protein Homology CDS 2467007 2467990 . - 0 ID=cds2241;Parent=gene2293;Dbxref=Genbank:WP_002211832.1;Name=WP_002211832.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002211832.1;transl_table=11 NC_005810.1 RefSeq gene 2468489 2468845 . - . ID=gene2294;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YP_RS11510;old_locus_tag=YP2218%2CYP_2218 NC_005810.1 Protein Homology CDS 2468489 2468845 . - 0 ID=cds2242;Parent=gene2294;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NC_005810.1 RefSeq gene 2468883 2469080 . - . ID=gene2295;Name=YP_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11515;old_locus_tag=YP2219%2CYP_2219 NC_005810.1 Protein Homology CDS 2468883 2469080 . - 0 ID=cds2243;Parent=gene2295;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NC_005810.1 RefSeq gene 2469177 2469527 . - . ID=gene2296;Name=YP_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11520;old_locus_tag=YP2220%2CYP_2220 NC_005810.1 Protein Homology CDS 2469177 2469527 . - 0 ID=cds2244;Parent=gene2296;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11 NC_005810.1 RefSeq gene 2469732 2471660 . - . ID=gene2297;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YP_RS11525;old_locus_tag=YP2221%2CYP_2221 NC_005810.1 Protein Homology CDS 2469732 2471660 . - 0 ID=cds2245;Parent=gene2297;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NC_005810.1 RefSeq gene 2472051 2472263 . + . ID=gene2298;Name=YP_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11530;old_locus_tag=YP2222%2CYP_2222 NC_005810.1 Protein Homology CDS 2472051 2472263 . + 0 ID=cds2246;Parent=gene2298;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11 NC_005810.1 RefSeq gene 2472573 2472950 . + . ID=gene2299;Name=YP_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11535;old_locus_tag=YP2223 NC_005810.1 Protein Homology CDS 2472573 2472950 . + 0 ID=cds2247;Parent=gene2299;Dbxref=Genbank:WP_002216692.1;Name=WP_002216692.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216692.1;transl_table=11 NC_005810.1 RefSeq gene 2473022 2473273 . - . ID=gene2300;Name=YP_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11540;old_locus_tag=YP2224 NC_005810.1 Protein Homology CDS 2473022 2473273 . - 0 ID=cds2248;Parent=gene2300;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NC_005810.1 RefSeq gene 2473592 2474275 . + . ID=gene2301;Name=YP_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11545;old_locus_tag=YP2225%2CYP_2225 NC_005810.1 Protein Homology CDS 2473592 2474275 . + 0 ID=cds2249;Parent=gene2301;Dbxref=Genbank:WP_002211840.1;Name=WP_002211840.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211840.1;transl_table=11 NC_005810.1 RefSeq gene 2474397 2475059 . - . ID=gene2302;Name=YP_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11550;old_locus_tag=YP2226%2CYP_2226 NC_005810.1 Protein Homology CDS 2474397 2475059 . - 0 ID=cds2250;Parent=gene2302;Dbxref=Genbank:WP_002216686.1;Name=WP_002216686.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_002216686.1;transl_table=11 NC_005810.1 RefSeq gene 2475271 2476239 . + . ID=gene2303;Name=YP_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11555;old_locus_tag=YP2227%2CYP_2227 NC_005810.1 Protein Homology CDS 2475271 2476239 . + 0 ID=cds2251;Parent=gene2303;Dbxref=Genbank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_002211842.1;transl_table=11 NC_005810.1 RefSeq gene 2476236 2477126 . + . ID=gene2304;Name=YP_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11560;old_locus_tag=YP2228%2CYP_2228 NC_005810.1 Protein Homology CDS 2476236 2477126 . + 0 ID=cds2252;Parent=gene2304;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11 NC_005810.1 RefSeq gene 2477126 2478010 . + . ID=gene2305;Name=YP_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11565;old_locus_tag=YP2229%2CYP_2229 NC_005810.1 Protein Homology CDS 2477126 2478010 . + 0 ID=cds2253;Parent=gene2305;Dbxref=Genbank:WP_002211844.1;Name=WP_002211844.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeC;protein_id=WP_002211844.1;transl_table=11 NC_005810.1 RefSeq gene 2478007 2478900 . + . ID=gene2306;Name=YP_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11570;old_locus_tag=YP2230%2CYP_2230 NC_005810.1 Protein Homology CDS 2478007 2478900 . + 0 ID=cds2254;Parent=gene2306;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11 NC_005810.1 RefSeq gene 2478968 2479180 . + . ID=gene2307;Name=YP_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11575 NC_005810.1 Protein Homology CDS 2478968 2479180 . + 0 ID=cds2255;Parent=gene2307;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11 NC_005810.1 RefSeq gene 2479205 2480080 . + . ID=gene2308;Name=YP_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11580;old_locus_tag=YP2231%2CYP_2231 NC_005810.1 Protein Homology CDS 2479205 2480080 . + 0 ID=cds2256;Parent=gene2308;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11 NC_005810.1 RefSeq gene 2480209 2480763 . - . ID=gene2309;Name=YP_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11585;old_locus_tag=YP2232%2CYP_2232 NC_005810.1 Protein Homology CDS 2480209 2480763 . - 0 ID=cds2257;Parent=gene2309;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2480858 2480895 . + . ID=id452;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2481174 2481839 . + . ID=gene2310;Name=YP_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11590;old_locus_tag=YP2233%2CYP_2233 NC_005810.1 Protein Homology CDS 2481174 2481839 . + 0 ID=cds2258;Parent=gene2310;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2481871 2481918 . + . ID=id453;Note=degenerate repeat region containing 3 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2482053 2483370 . + . ID=id454;gbkey=repeat_region NC_005810.1 RefSeq region 2482055 2483369 . - . ID=id455;gbkey=mobile_element NC_005810.1 RefSeq gene 2482090 2483298 . - . ID=gene2311;Name=YP_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11595;old_locus_tag=YP2234%2CYP_2234 NC_005810.1 Protein Homology CDS 2482090 2483298 . - 0 ID=cds2259;Parent=gene2311;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2483394 2483807 . - . ID=gene2312;Name=YP_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11600;old_locus_tag=YP2235%2CYP_2235 NC_005810.1 Protein Homology CDS 2483394 2483807 . - 0 ID=cds2260;Parent=gene2312;Dbxref=Genbank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NC_005810.1 RefSeq gene 2483815 2484180 . - . ID=gene2313;Name=YP_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11605 NC_005810.1 Protein Homology CDS 2483815 2484180 . - 0 ID=cds2261;Parent=gene2313;Dbxref=Genbank:WP_002213099.1;Name=WP_002213099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213099.1;transl_table=11 NC_005810.1 RefSeq gene 2484922 2486226 . - . ID=gene2314;Name=YP_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11610;old_locus_tag=YP2237%2CYP_2237 NC_005810.1 Protein Homology CDS 2484922 2486226 . - 0 ID=cds2262;Parent=gene2314;Dbxref=Genbank:WP_002213097.1;Name=WP_002213097.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_002213097.1;transl_table=11 NC_005810.1 RefSeq gene 2486601 2487143 . - . ID=gene2315;Name=YP_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11615;old_locus_tag=YP2238%2CYP_2238 NC_005810.1 Protein Homology CDS 2486601 2487143 . - 0 ID=cds2263;Parent=gene2315;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11 NC_005810.1 RefSeq gene 2487271 2488290 . - . ID=gene2316;Name=YP_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11620;old_locus_tag=YP2239%2CYP_2239 NC_005810.1 Protein Homology CDS 2487271 2488290 . - 0 ID=cds2264;Parent=gene2316;Dbxref=Genbank:WP_002215854.1;Name=WP_002215854.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_002215854.1;transl_table=11 NC_005810.1 RefSeq gene 2488373 2489239 . - . ID=gene2317;Name=YP_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11625;old_locus_tag=YP2240%2CYP_2240 NC_005810.1 Protein Homology CDS 2488373 2489239 . - 0 ID=cds2265;Parent=gene2317;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NC_005810.1 RefSeq gene 2489220 2489795 . - . ID=gene2318;Name=YP_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11630;old_locus_tag=YP2241%2CYP_2241 NC_005810.1 Protein Homology CDS 2489220 2489795 . - 0 ID=cds2266;Parent=gene2318;Dbxref=Genbank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11 NC_005810.1 RefSeq gene 2489836 2490225 . - . ID=gene2319;Name=YP_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11635;old_locus_tag=YP2242%2CYP_2242 NC_005810.1 Protein Homology CDS 2489836 2490225 . - 0 ID=cds2267;Parent=gene2319;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11 NC_005810.1 RefSeq gene 2490260 2490613 . - . ID=gene2320;Name=YP_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11640;old_locus_tag=YP2243%2CYP_2243 NC_005810.1 Protein Homology CDS 2490260 2490613 . - 0 ID=cds2268;Parent=gene2320;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NC_005810.1 RefSeq gene 2490787 2491605 . - . ID=gene2321;Name=YP_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11645;old_locus_tag=YP2244%2CYP_2244 NC_005810.1 Protein Homology CDS 2490787 2491605 . - 0 ID=cds2269;Parent=gene2321;Dbxref=Genbank:WP_002215853.1;Name=WP_002215853.1;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2491934 2492658 . + . ID=id456;gbkey=repeat_region NC_005810.1 RefSeq region 2491940 2492651 . - . ID=id457;gbkey=mobile_element NC_005810.1 RefSeq gene 2492048 2492506 . - . ID=gene2322;Name=YP_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11650;old_locus_tag=YP2245%2CYP_2245 NC_005810.1 Protein Homology CDS 2492048 2492506 . - 0 ID=cds2270;Parent=gene2322;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 2492696 2494129 . - . ID=gene2323;Name=YP_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11655;old_locus_tag=YP2246%2CYP_2246 NC_005810.1 Protein Homology CDS 2492696 2494129 . - 0 ID=cds2271;Parent=gene2323;Dbxref=Genbank:WP_002213085.1;Name=WP_002213085.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIBC;protein_id=WP_002213085.1;transl_table=11 NC_005810.1 RefSeq gene 2494435 2495244 . - . ID=gene2324;Name=YP_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11660;old_locus_tag=YP2247%2CYP_2247 NC_005810.1 Protein Homology CDS 2494435 2495244 . - 0 ID=cds2272;Parent=gene2324;Dbxref=Genbank:WP_002213084.1;Name=WP_002213084.1;gbkey=CDS;product=DNAse;protein_id=WP_002213084.1;transl_table=11 NC_005810.1 RefSeq gene 2495259 2496281 . - . ID=gene2325;Name=YP_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11665;old_locus_tag=YP2248%2CYP_2248 NC_005810.1 Protein Homology CDS 2495259 2496281 . - 0 ID=cds2273;Parent=gene2325;Dbxref=Genbank:WP_002213083.1;Name=WP_002213083.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11 NC_005810.1 RefSeq gene 2496281 2496919 . - . ID=gene2326;Name=YP_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11670;old_locus_tag=YP2249%2CYP_2249 NC_005810.1 Protein Homology CDS 2496281 2496919 . - 0 ID=cds2274;Parent=gene2326;Dbxref=Genbank:WP_002213082.1;Name=WP_002213082.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_002213082.1;transl_table=11 NC_005810.1 RefSeq gene 2496909 2497934 . - . ID=gene2327;Name=YP_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11675;old_locus_tag=YP2250%2CYP_2250 NC_005810.1 Protein Homology CDS 2496909 2497934 . - 0 ID=cds2275;Parent=gene2327;Dbxref=Genbank:WP_002217396.1;Name=WP_002217396.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_002217396.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2497946 2497985 . + . ID=id458;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2498017 2498190 . + . ID=id459;gbkey=repeat_region NC_005810.1 RefSeq gene 2498223 2499029 . - . ID=gene2328;Name=YP_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11680;old_locus_tag=YP2251%2CYP_2251 NC_005810.1 Protein Homology CDS 2498223 2499029 . - 0 ID=cds2276;Parent=gene2328;Dbxref=Genbank:WP_002213080.1;Name=WP_002213080.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_002213080.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2499335 2500053 . + . ID=id460;gbkey=repeat_region NC_005810.1 RefSeq region 2499337 2500048 . - . ID=id461;gbkey=mobile_element NC_005810.1 RefSeq gene 2499445 2499903 . - . ID=gene2329;Name=YP_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11685;old_locus_tag=YP2252%2CYP_2252 NC_005810.1 Protein Homology CDS 2499445 2499903 . - 0 ID=cds2277;Parent=gene2329;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 2500103 2501308 . - . ID=gene2330;Name=YP_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11690;old_locus_tag=YP2253%2CYP_2253 NC_005810.1 Protein Homology CDS 2500103 2501308 . - 0 ID=cds2278;Parent=gene2330;Dbxref=Genbank:WP_002354075.1;Name=WP_002354075.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002354075.1;transl_table=11 NC_005810.1 RefSeq gene 2501439 2501675 . - . ID=gene2331;Name=YP_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11695;old_locus_tag=YP2254%2CYP_2254 NC_005810.1 Protein Homology CDS 2501439 2501675 . - 0 ID=cds2279;Parent=gene2331;Dbxref=Genbank:WP_002220787.1;Name=WP_002220787.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NC_005810.1 RefSeq gene 2501829 2502563 . - . ID=gene2332;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YP_RS11700;old_locus_tag=YP2255%2CYP_2255 NC_005810.1 Protein Homology CDS 2501829 2502563 . - 0 ID=cds2280;Parent=gene2332;Dbxref=Genbank:WP_002210935.1;Name=WP_002210935.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_002210935.1;transl_table=11 NC_005810.1 RefSeq gene 2502577 2503506 . - . ID=gene2333;Name=YP_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11705;old_locus_tag=YP2256%2CYP_2256 NC_005810.1 Protein Homology CDS 2502577 2503506 . - 0 ID=cds2281;Parent=gene2333;Dbxref=Genbank:WP_002210934.1;Name=WP_002210934.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_002210934.1;transl_table=11 NC_005810.1 RefSeq gene 2503544 2504494 . - . ID=gene2334;Name=YP_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11710;old_locus_tag=YP2257%2CYP_2257 NC_005810.1 Protein Homology CDS 2503544 2504494 . - 0 ID=cds2282;Parent=gene2334;Dbxref=Genbank:WP_002210933.1;Name=WP_002210933.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NC_005810.1 RefSeq gene 2504501 2505505 . - . ID=gene2335;Name=YP_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11715;old_locus_tag=YP2258%2CYP_2258 NC_005810.1 Protein Homology CDS 2504501 2505505 . - 0 ID=cds2283;Parent=gene2335;Dbxref=Genbank:WP_032465670.1;Name=WP_032465670.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_032465670.1;transl_table=11 NC_005810.1 RefSeq gene 2505569 2505736 . - . ID=gene2336;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YP_RS11720;old_locus_tag=YP2259%2CYP_2259 NC_005810.1 Protein Homology CDS 2505569 2505736 . - 0 ID=cds2284;Parent=gene2336;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NC_005810.1 RefSeq gene 2505749 2506273 . - . ID=gene2337;Name=YP_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11725;old_locus_tag=YP2260%2CYP_2260 NC_005810.1 Protein Homology CDS 2505749 2506273 . - 0 ID=cds2285;Parent=gene2337;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11 NC_005810.1 RefSeq gene 2506415 2507011 . + . ID=gene2338;Name=YP_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11730;old_locus_tag=YP2261%2CYP_2261 NC_005810.1 Protein Homology CDS 2506415 2507011 . + 0 ID=cds2286;Parent=gene2338;Dbxref=Genbank:WP_002210928.1;Name=WP_002210928.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210928.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2507022 2507055 . + . ID=id462;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2507134 2508096 . - . ID=gene2339;Name=YP_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11735;old_locus_tag=YP2262%2CYP_2262 NC_005810.1 Protein Homology CDS 2507134 2508096 . - 0 ID=cds2287;Parent=gene2339;Dbxref=Genbank:WP_002210927.1;Name=WP_002210927.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=WP_002210927.1;transl_table=11 NC_005810.1 RefSeq gene 2508680 2512336 . + . ID=gene2340;Name=YP_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11740;old_locus_tag=YP2263%2CYP_2263 NC_005810.1 Protein Homology CDS 2508680 2512336 . + 0 ID=cds2288;Parent=gene2340;Dbxref=Genbank:WP_002354074.1;Name=WP_002354074.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_002354074.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2510570 2510614 . + . ID=id463;Note=degenerate repeat region containing 3 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2511678 2511713 . + . ID=id464;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2512594 2512881 . - . ID=gene2341;Name=YP_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11745;old_locus_tag=YP_5000 NC_005810.1 Protein Homology CDS 2512594 2512881 . - 0 ID=cds2289;Parent=gene2341;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11 NC_005810.1 RefSeq gene 2513116 2514162 . + . ID=gene2342;Name=YP_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11750;old_locus_tag=YP2265%2CYP_2265 NC_005810.1 Protein Homology CDS 2513116 2514162 . + 0 ID=cds2290;Parent=gene2342;Dbxref=Genbank:WP_002213109.1;Name=WP_002213109.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_002213109.1;transl_table=11 NC_005810.1 RefSeq gene 2514475 2514720 . + . ID=gene2343;Name=YP_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11755;old_locus_tag=YP2266%2CYP_2266 NC_005810.1 Protein Homology CDS 2514475 2514720 . + 0 ID=cds2291;Parent=gene2343;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NC_005810.1 RefSeq gene 2514919 2515047 . - . ID=gene2344;Name=YP_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11760 NC_005810.1 Protein Homology CDS 2514919 2515047 . - 0 ID=cds2292;Parent=gene2344;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11 NC_005810.1 RefSeq gene 2515226 2515522 . + . ID=gene2345;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=YP_RS11765 NC_005810.1 Protein Homology CDS 2515226 2515522 . + 0 ID=cds2293;Parent=gene2345;Dbxref=Genbank:WP_002217041.1;Name=WP_002217041.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_002217041.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2515447 2516766 . + . ID=id465;gbkey=repeat_region;gene=bssS NC_005810.1 RefSeq region 2515450 2516764 . - . ID=id466;gbkey=mobile_element;gene=bssS NC_005810.1 RefSeq gene 2515485 2516693 . - . ID=gene2346;Name=YP_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11770;old_locus_tag=YP2267%2CYP_2267 NC_005810.1 Protein Homology CDS 2515485 2516693 . - 0 ID=cds2294;Parent=gene2346;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2517054 2518169 . + . ID=gene2347;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YP_RS11775;old_locus_tag=YP2268%2CYP_2268 NC_005810.1 Protein Homology CDS 2517054 2518169 . + 0 ID=cds2295;Parent=gene2347;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NC_005810.1 RefSeq gene 2518436 2519050 . + . ID=gene2348;Name=YP_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11780;old_locus_tag=YP2269%2CYP_2269 NC_005810.1 Protein Homology CDS 2518436 2519050 . + 0 ID=cds2296;Parent=gene2348;Dbxref=Genbank:WP_002211851.1;Name=WP_002211851.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211851.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2518708 2518767 . + . ID=id467;Note=exact repeat region containing 2 copies of a 30 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2519622 2520680 . - . ID=gene2349;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=YP_RS11785;old_locus_tag=YP2270%2CYP_2270 NC_005810.1 Protein Homology CDS 2519622 2520680 . - 0 ID=cds2297;Parent=gene2349;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2520756 2520799 . + . ID=id468;Note=degenerate repeat region containing 2 copies of a 22bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2520829 2521896 . - . ID=gene2350;Name=YP_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11790;old_locus_tag=YP2271%2CYP_2271 NC_005810.1 Protein Homology CDS 2520829 2521896 . - 0 ID=cds2298;Parent=gene2350;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11 NC_005810.1 RefSeq gene 2521940 2522068 . - . ID=gene2351;Name=YP_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11795 NC_005810.1 Protein Homology CDS 2521940 2522068 . - 0 ID=cds2299;Parent=gene2351;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11 NC_005810.1 RefSeq gene 2522255 2522419 . - . ID=gene2352;Name=YP_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11800 NC_005810.1 Protein Homology CDS 2522255 2522419 . - 0 ID=cds2300;Parent=gene2352;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11 NC_005810.1 RefSeq gene 2522749 2522910 . - . ID=gene2353;Name=YP_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11805;old_locus_tag=YP2273%2CYP_2273 NC_005810.1 Protein Homology CDS 2522749 2522910 . - 0 ID=cds2301;Parent=gene2353;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11 NC_005810.1 RefSeq gene 2522947 2523624 . - . ID=gene2354;Name=YP_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11810;old_locus_tag=YP2274%2CYP_2274 NC_005810.1 Protein Homology CDS 2522947 2523624 . - 0 ID=cds2302;Parent=gene2354;Dbxref=Genbank:WP_002211857.1;Name=WP_002211857.1;gbkey=CDS;product=transporter;protein_id=WP_002211857.1;transl_table=11 NC_005810.1 RefSeq gene 2524055 2524699 . + . ID=gene2355;Name=YP_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11815;old_locus_tag=YP2275%2CYP_2275 NC_005810.1 Protein Homology CDS 2524055 2524699 . + 0 ID=cds2303;Parent=gene2355;Dbxref=Genbank:WP_002211858.1;Name=WP_002211858.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11 NC_005810.1 RefSeq gene 2524692 2525429 . - . ID=gene2356;Name=YP_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11820;old_locus_tag=YP2276%2CYP_2276 NC_005810.1 Protein Homology CDS 2524692 2525429 . - 0 ID=cds2304;Parent=gene2356;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NC_005810.1 RefSeq gene 2525916 2526842 . - . ID=gene2357;Name=YP_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11825;old_locus_tag=YP2277%2CYP_2277 NC_005810.1 Protein Homology CDS 2525916 2526842 . - 0 ID=cds2305;Parent=gene2357;Dbxref=Genbank:WP_002211861.1;Name=WP_002211861.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211861.1;transl_table=11 NC_005810.1 RefSeq gene 2526957 2527166 . - . ID=gene2358;Name=YP_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11830 NC_005810.1 Protein Homology CDS 2526957 2527166 . - 0 ID=cds2306;Parent=gene2358;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11 NC_005810.1 RefSeq gene 2527290 2528648 . + . ID=gene2359;Name=YP_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11835;old_locus_tag=YP2278%2CYP_2278 NC_005810.1 Protein Homology CDS 2527290 2528648 . + 0 ID=cds2307;Parent=gene2359;Dbxref=Genbank:WP_002211863.1;Name=WP_002211863.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211863.1;transl_table=11 NC_005810.1 RefSeq gene 2528695 2529198 . + . ID=gene2360;Name=YP_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11840;old_locus_tag=YP2279%2CYP_2279 NC_005810.1 Protein Homology CDS 2528695 2529198 . + 0 ID=cds2308;Parent=gene2360;Dbxref=Genbank:WP_002211864.1;Name=WP_002211864.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_002211864.1;transl_table=11 NC_005810.1 RefSeq gene 2529209 2530228 . + . ID=gene2361;Name=YP_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11845;old_locus_tag=YP2280%2CYP_2280 NC_005810.1 Protein Homology CDS 2529209 2530228 . + 0 ID=cds2309;Parent=gene2361;Dbxref=Genbank:WP_002211865.1;Name=WP_002211865.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211865.1;transl_table=11 NC_005810.1 RefSeq gene 2530306 2530860 . - . ID=gene2362;Name=YP_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11850;old_locus_tag=YP2281%2CYP_2281 NC_005810.1 Protein Homology CDS 2530306 2530860 . - 0 ID=cds2310;Parent=gene2362;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11 NC_005810.1 RefSeq gene 2530871 2531875 . - . ID=gene2363;Name=YP_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11855;old_locus_tag=YP2282%2CYP_2282 NC_005810.1 Protein Homology CDS 2530871 2531875 . - 0 ID=cds2311;Parent=gene2363;Dbxref=Genbank:WP_002211867.1;Name=WP_002211867.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_002211867.1;transl_table=11 NC_005810.1 RefSeq gene 2531893 2532843 . - . ID=gene2364;Name=YP_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11860;old_locus_tag=YP2283%2CYP_2283 NC_005810.1 Protein Homology CDS 2531893 2532843 . - 0 ID=cds2312;Parent=gene2364;Dbxref=Genbank:WP_002211868.1;Name=WP_002211868.1;gbkey=CDS;product=CRISPR type I-F system protein Csy2;protein_id=WP_002211868.1;transl_table=11 NC_005810.1 RefSeq gene 2532840 2534186 . - . ID=gene2365;Name=YP_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11865;old_locus_tag=YP2284%2CYP_2284 NC_005810.1 Protein Homology CDS 2532840 2534186 . - 0 ID=cds2313;Parent=gene2365;Dbxref=Genbank:WP_002222491.1;Name=WP_002222491.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_002222491.1;transl_table=11 NC_005810.1 RefSeq gene 2534595 2537882 . - . ID=gene2366;Name=YP_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11870;old_locus_tag=YP2286%2CYP_2286 NC_005810.1 Protein Homology CDS 2534595 2537882 . - 0 ID=cds2314;Parent=gene2366;Dbxref=Genbank:WP_002221142.1;Name=WP_002221142.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_002221142.1;transl_table=11 NC_005810.1 RefSeq gene 2537879 2538859 . - . ID=gene2367;Name=YP_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11875;old_locus_tag=YP2287%2CYP_2287 NC_005810.1 Protein Homology CDS 2537879 2538859 . - 0 ID=cds2315;Parent=gene2367;Dbxref=Genbank:WP_002210191.1;Name=WP_002210191.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_002210191.1;transl_table=11 NC_005810.1 RefSeq gene 2539762 2541006 . + . ID=gene2368;Name=YP_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11885;old_locus_tag=YP2288%2CYP_2288 NC_005810.1 Protein Homology CDS 2539762 2541006 . + 0 ID=cds2316;Parent=gene2368;Dbxref=Genbank:WP_002210192.1;Name=WP_002210192.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_002210192.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2541106 2541147 . + . ID=id469;gbkey=repeat_region NC_005810.1 RefSeq gene 2541595 2542869 . - . ID=gene2369;Name=YP_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11890;old_locus_tag=YP2290%2CYP_2290 NC_005810.1 Protein Homology CDS 2541595 2542869 . - 0 ID=cds2317;Parent=gene2369;Dbxref=Genbank:WP_002210193.1;Name=WP_002210193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210193.1;transl_table=11 NC_005810.1 RefSeq gene 2542908 2544023 . - . ID=gene2370;Name=YP_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11895;old_locus_tag=YP2291%2CYP_2291 NC_005810.1 Protein Homology CDS 2542908 2544023 . - 0 ID=cds2318;Parent=gene2370;Dbxref=Genbank:WP_002230953.1;Name=WP_002230953.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230953.1;transl_table=11 NC_005810.1 RefSeq gene 2544146 2545084 . - . ID=gene2371;Name=YP_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11900;old_locus_tag=YP2292%2CYP_2292 NC_005810.1 Protein Homology CDS 2544146 2545084 . - 0 ID=cds2319;Parent=gene2371;Dbxref=Genbank:WP_002213840.1;Name=WP_002213840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213840.1;transl_table=11 NC_005810.1 RefSeq gene 2545111 2546166 . - . ID=gene2372;Name=YP_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11905;old_locus_tag=YP2293%2CYP_2293 NC_005810.1 Protein Homology CDS 2545111 2546166 . - 0 ID=cds2320;Parent=gene2372;Dbxref=Genbank:WP_002210196.1;Name=WP_002210196.1;gbkey=CDS;product=glycosidase;protein_id=WP_002210196.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2546217 2546267 . + . ID=id470;Note=degenerate repeat region containing 3 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2546313 2547137 . - . ID=gene2373;Name=YP_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11910;old_locus_tag=YP2294%2CYP_2294 NC_005810.1 Protein Homology CDS 2546313 2547137 . - 0 ID=cds2321;Parent=gene2373;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NC_005810.1 RefSeq gene 2547138 2548013 . - . ID=gene2374;Name=YP_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11915;old_locus_tag=YP2295%2CYP_2295 NC_005810.1 Protein Homology CDS 2547138 2548013 . - 0 ID=cds2322;Parent=gene2374;Dbxref=Genbank:WP_002210198.1;Name=WP_002210198.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210198.1;transl_table=11 NC_005810.1 RefSeq gene 2548122 2549408 . - . ID=gene2375;Name=YP_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11920;old_locus_tag=YP2296%2CYP_2296 NC_005810.1 Protein Homology CDS 2548122 2549408 . - 0 ID=cds2323;Parent=gene2375;Dbxref=Genbank:WP_002210199.1;Name=WP_002210199.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002210199.1;transl_table=11 NC_005810.1 RefSeq gene 2549680 2550720 . + . ID=gene2376;Name=YP_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11925;old_locus_tag=YP2297%2CYP_2297 NC_005810.1 Protein Homology CDS 2549680 2550720 . + 0 ID=cds2324;Parent=gene2376;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NC_005810.1 RefSeq gene 2550737 2552125 . + . ID=gene2377;Name=YP_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11930;old_locus_tag=YP2298%2CYP_2298 NC_005810.1 Protein Homology CDS 2550737 2552125 . + 0 ID=cds2325;Parent=gene2377;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11 NC_005810.1 RefSeq gene 2552225 2553304 . + . ID=gene2378;Name=YP_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11935;old_locus_tag=YP2299%2CYP_2299 NC_005810.1 Protein Homology CDS 2552225 2553304 . + 0 ID=cds2326;Parent=gene2378;Dbxref=Genbank:WP_002210202.1;Name=WP_002210202.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210202.1;transl_table=11 NC_005810.1 RefSeq gene 2553569 2554021 . - . ID=gene2379;Name=YP_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11940;old_locus_tag=YP2300%2CYP_2300 NC_005810.1 Protein Homology CDS 2553569 2554021 . - 0 ID=cds2327;Parent=gene2379;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2554211 2554379 . + . ID=id471;gbkey=repeat_region NC_005810.1 RefSeq gene 2554372 2554764 . - . ID=gene2380;Name=YP_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11945;old_locus_tag=YP2301%2CYP_2301 NC_005810.1 Protein Homology CDS 2554372 2554764 . - 0 ID=cds2328;Parent=gene2380;Dbxref=Genbank:WP_002213832.1;Name=WP_002213832.1;gbkey=CDS;product=adhesin;protein_id=WP_002213832.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2554533 2554783 . + . ID=id472;gbkey=repeat_region NC_005810.1 RefSeq gene 2554924 2555328 . - . ID=gene2381;Name=YP_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11950;old_locus_tag=YP2302%2CYP_2302 NC_005810.1 Protein Homology CDS 2554924 2555328 . - 0 ID=cds2329;Parent=gene2381;Dbxref=Genbank:WP_002213829.1;Name=WP_002213829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213829.1;transl_table=11 NC_005810.1 RefSeq gene 2555470 2555637 . - . ID=gene2382;Name=YP_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11955;old_locus_tag=YP2303%2CYP_2303 NC_005810.1 Protein Homology CDS 2555470 2555637 . - 0 ID=cds2330;Parent=gene2382;Dbxref=Genbank:WP_002213827.1;Name=WP_002213827.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213827.1;transl_table=11 NC_005810.1 RefSeq gene 2555840 2556037 . - . ID=gene2383;Name=YP_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11960;old_locus_tag=YP2304%2CYP_2304 NC_005810.1 Protein Homology CDS 2555840 2556037 . - 0 ID=cds2331;Parent=gene2383;Dbxref=Genbank:WP_002210208.1;Name=WP_002210208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210208.1;transl_table=11 NC_005810.1 RefSeq gene 2556047 2563771 . - . ID=gene2384;Name=YP_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11965;old_locus_tag=YP2305%2CYP_2305 NC_005810.1 Protein Homology CDS 2556047 2563771 . - 0 ID=cds2332;Parent=gene2384;Dbxref=Genbank:WP_011171878.1;Name=WP_011171878.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_011171878.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2556652 2556820 . + . ID=id473;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2557609 2557859 . + . ID=id474;gbkey=repeat_region NC_005810.1 RefSeq gene 2563927 2565615 . - . ID=gene2385;Name=YP_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11970;old_locus_tag=YP2306%2CYP_2306 NC_005810.1 Protein Homology CDS 2563927 2565615 . - 0 ID=cds2333;Parent=gene2385;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11 NC_005810.1 RefSeq gene 2566268 2567233 . - . ID=gene2386;Name=YP_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11975;old_locus_tag=YP2307%2CYP_2307 NC_005810.1 Protein Homology CDS 2566268 2567233 . - 0 ID=cds2334;Parent=gene2386;Dbxref=Genbank:WP_002213817.1;Name=WP_002213817.1;gbkey=CDS;product=dioxygenase subunit beta;protein_id=WP_002213817.1;transl_table=11 NC_005810.1 RefSeq gene 2567329 2568453 . - . ID=gene2387;Name=YP_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11980;old_locus_tag=YP2308%2CYP_2308 NC_005810.1 Protein Homology CDS 2567329 2568453 . - 0 ID=cds2335;Parent=gene2387;Dbxref=Genbank:WP_002213815.1;Name=WP_002213815.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002213815.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2568564 2568589 . + . ID=id475;Note=exact repeat region containing 2 copies of a 13 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2568570 2570216 . - . ID=gene2388;Name=YP_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11985;old_locus_tag=YP2309%2CYP_2309 NC_005810.1 Protein Homology CDS 2568570 2570216 . - 0 ID=cds2336;Parent=gene2388;Dbxref=Genbank:WP_002210215.1;Name=WP_002210215.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_002210215.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2568603 2568632 . + . ID=id476;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2570582 2570764 . - . ID=gene2389;Name=YP_RS11990;gbkey=Gene;gene_biotype=other;locus_tag=YP_RS11990;old_locus_tag=YP2310 NC_005810.1 RefSeq repeat_region 2570623 2570798 . + . ID=id477;gbkey=repeat_region NC_005810.1 RefSeq gene 2570833 2571918 . - . ID=gene2390;Name=YP_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS11995;old_locus_tag=YP2311%2CYP_2311 NC_005810.1 Protein Homology CDS 2570833 2571918 . - 0 ID=cds2337;Parent=gene2390;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NC_005810.1 RefSeq gene 2572021 2572962 . + . ID=gene2391;Name=YP_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12000;old_locus_tag=YP2312%2CYP_2312 NC_005810.1 Protein Homology CDS 2572021 2572962 . + 0 ID=cds2338;Parent=gene2391;Dbxref=Genbank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210219.1;transl_table=11 NC_005810.1 RefSeq gene 2573209 2574213 . + . ID=gene2392;Name=YP_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12005;old_locus_tag=YP2313%2CYP_2313 NC_005810.1 Protein Homology CDS 2573209 2574213 . + 0 ID=cds2339;Parent=gene2392;Dbxref=Genbank:WP_002210220.1;Name=WP_002210220.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210220.1;transl_table=11 NC_005810.1 RefSeq gene 2574346 2575338 . - . ID=gene2393;Name=YP_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12010;old_locus_tag=YP2314%2CYP_2314 NC_005810.1 Protein Homology CDS 2574346 2575338 . - 0 ID=cds2340;Parent=gene2393;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NC_005810.1 RefSeq gene 2575335 2576825 . - . ID=gene2394;Name=YP_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12015;old_locus_tag=YP2315%2CYP_2315 NC_005810.1 Protein Homology CDS 2575335 2576825 . - 0 ID=cds2341;Parent=gene2394;Dbxref=Genbank:WP_002210222.1;Name=WP_002210222.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210222.1;transl_table=11 NC_005810.1 RefSeq gene 2576865 2577782 . - . ID=gene2395;Name=YP_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12020;old_locus_tag=YP2316%2CYP_2316 NC_005810.1 Protein Homology CDS 2576865 2577782 . - 0 ID=cds2342;Parent=gene2395;Dbxref=Genbank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210223.1;transl_table=11 NC_005810.1 RefSeq gene 2577957 2579024 . - . ID=gene2396;Name=YP_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12025;old_locus_tag=YP2317%2CYP_2317 NC_005810.1 Protein Homology CDS 2577957 2579024 . - 0 ID=cds2343;Parent=gene2396;Dbxref=Genbank:WP_002225243.1;Name=WP_002225243.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002225243.1;transl_table=11 NC_005810.1 RefSeq gene 2579766 2580434 . - . ID=gene2397;Name=YP_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12030;old_locus_tag=YP2318%2CYP_2318 NC_005810.1 Protein Homology CDS 2579766 2580434 . - 0 ID=cds2344;Parent=gene2397;Dbxref=Genbank:WP_002210225.1;Name=WP_002210225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210225.1;transl_table=11 NC_005810.1 RefSeq gene 2580630 2581172 . - . ID=gene2398;Name=YP_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12035;old_locus_tag=YP2319%2CYP_2319 NC_005810.1 Protein Homology CDS 2580630 2581172 . - 0 ID=cds2345;Parent=gene2398;Dbxref=Genbank:WP_002210227.1;Name=WP_002210227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210227.1;transl_table=11 NC_005810.1 RefSeq gene 2581410 2582348 . - . ID=gene2399;Name=YP_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12040;old_locus_tag=YP2320%2CYP_2320 NC_005810.1 Protein Homology CDS 2581410 2582348 . - 0 ID=cds2346;Parent=gene2399;Dbxref=Genbank:WP_002210228.1;Name=WP_002210228.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_002210228.1;transl_table=11 NC_005810.1 RefSeq gene 2582664 2583188 . - . ID=gene2400;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YP_RS12045;old_locus_tag=YP2321%2CYP_2321 NC_005810.1 Protein Homology CDS 2582664 2583188 . - 0 ID=cds2347;Parent=gene2400;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 2583294 2583313 . - . ID=id478;Dbxref=CollecTF:EXPSITE_0002b340;Note=Transcription factor binding site for NP_991538. Originally reported in Yersinia pestis biovar Microtus str. 201~Evidence of regulation for: YP_2321;gbkey=protein_bind NC_005810.1 RefSeq gene 2583593 2584480 . + . ID=gene2401;Name=YP_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12050;old_locus_tag=YP2322%2CYP_2322 NC_005810.1 Protein Homology CDS 2583593 2584480 . + 0 ID=cds2348;Parent=gene2401;Dbxref=Genbank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002213809.1;transl_table=11 NC_005810.1 RefSeq gene 2584496 2584993 . + . ID=gene2402;Name=YP_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12055;old_locus_tag=YP2323%2CYP_2323 NC_005810.1 Protein Homology CDS 2584496 2584993 . + 0 ID=cds2349;Parent=gene2402;Dbxref=Genbank:WP_002210231.1;Name=WP_002210231.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002210231.1;transl_table=11 NC_005810.1 RefSeq gene 2585016 2585792 . + . ID=gene2403;Name=YP_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12060;old_locus_tag=YP2324%2CYP_2324 NC_005810.1 Protein Homology CDS 2585016 2585792 . + 0 ID=cds2350;Parent=gene2403;Dbxref=Genbank:WP_002210232.1;Name=WP_002210232.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_002210232.1;transl_table=11 NC_005810.1 RefSeq gene 2586049 2586552 . + . ID=gene2404;Name=YP_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12065;old_locus_tag=YP2325%2CYP_2325 NC_005810.1 Protein Homology CDS 2586049 2586552 . + 0 ID=cds2351;Parent=gene2404;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11 NC_005810.1 RefSeq gene 2586872 2587999 . + . ID=gene2405;Name=YP_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12070;old_locus_tag=YP2326%2CYP_2326 NC_005810.1 Protein Homology CDS 2586872 2587999 . + 0 ID=cds2352;Parent=gene2405;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11 NC_005810.1 RefSeq gene 2588569 2589312 . + . ID=gene2406;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YP_RS12075;old_locus_tag=YP2327%2CYP_2327 NC_005810.1 Protein Homology CDS 2588569 2589312 . + 0 ID=cds2353;Parent=gene2406;Dbxref=Genbank:WP_002210235.1;Name=WP_002210235.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-binding protein;protein_id=WP_002210235.1;transl_table=11 NC_005810.1 RefSeq gene 2589347 2590003 . + . ID=gene2407;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YP_RS12080;old_locus_tag=YP2328%2CYP_2328 NC_005810.1 Protein Homology CDS 2589347 2590003 . + 0 ID=cds2354;Parent=gene2407;Dbxref=Genbank:WP_002210236.1;Name=WP_002210236.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_002210236.1;transl_table=11 NC_005810.1 RefSeq gene 2590000 2590722 . + . ID=gene2408;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YP_RS12085;old_locus_tag=YP2329%2CYP_2329 NC_005810.1 Protein Homology CDS 2590000 2590722 . + 0 ID=cds2355;Parent=gene2408;Dbxref=Genbank:WP_002210237.1;Name=WP_002210237.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_002210237.1;transl_table=11 NC_005810.1 RefSeq gene 2590962 2592254 . - . ID=gene2409;Name=YP_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12090;old_locus_tag=YP2330%2CYP_2330 NC_005810.1 Protein Homology CDS 2590962 2592254 . - 0 ID=cds2356;Parent=gene2409;Dbxref=Genbank:WP_002225247.1;Name=WP_002225247.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002225247.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2592332 2592506 . + . ID=id479;gbkey=repeat_region NC_005810.1 RefSeq gene 2593023 2594033 . - . ID=gene2410;Name=YP_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12095;old_locus_tag=YP2331%2CYP_2331 NC_005810.1 Protein Homology CDS 2593023 2594033 . - 0 ID=cds2357;Parent=gene2410;Dbxref=Genbank:WP_002230969.1;Name=WP_002230969.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_002230969.1;transl_table=11 NC_005810.1 RefSeq gene 2594321 2594581 . + . ID=gene2411;Name=YP_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12100;old_locus_tag=YP2332%2CYP_2332 NC_005810.1 Protein Homology CDS 2594321 2594581 . + 0 ID=cds2358;Parent=gene2411;Dbxref=Genbank:WP_002210240.1;Name=WP_002210240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210240.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2594745 2594918 . + . ID=id480;gbkey=repeat_region NC_005810.1 RefSeq gene 2594963 2595922 . - . ID=gene2412;Name=YP_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12105;old_locus_tag=YP2333%2CYP_2333 NC_005810.1 Protein Homology CDS 2594963 2595922 . - 0 ID=cds2359;Parent=gene2412;Dbxref=Genbank:WP_002210242.1;Name=WP_002210242.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210242.1;transl_table=11 NC_005810.1 RefSeq gene 2595988 2597403 . - . ID=gene2413;Name=YP_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12110;old_locus_tag=YP2334%2CYP_2334 NC_005810.1 Protein Homology CDS 2595988 2597403 . - 0 ID=cds2360;Parent=gene2413;Dbxref=Genbank:WP_002210243.1;Name=WP_002210243.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_002210243.1;transl_table=11 NC_005810.1 RefSeq gene 2597391 2598362 . - . ID=gene2414;Name=YP_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12115;old_locus_tag=YP2335%2CYP_2335 NC_005810.1 Protein Homology CDS 2597391 2598362 . - 0 ID=cds2361;Parent=gene2414;Dbxref=Genbank:WP_002210244.1;Name=WP_002210244.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_002210244.1;transl_table=11 NC_005810.1 RefSeq gene 2598362 2599219 . - . ID=gene2415;Name=YP_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12120;old_locus_tag=YP2336%2CYP_2336 NC_005810.1 Protein Homology CDS 2598362 2599219 . - 0 ID=cds2362;Parent=gene2415;Dbxref=Genbank:WP_002210245.1;Name=WP_002210245.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=naphthoate synthase;protein_id=WP_002210245.1;transl_table=11 NC_005810.1 RefSeq gene 2599233 2600051 . - . ID=gene2416;Name=YP_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12125;old_locus_tag=YP2337%2CYP_2337 NC_005810.1 Protein Homology CDS 2599233 2600051 . - 0 ID=cds2363;Parent=gene2416;Dbxref=Genbank:WP_002210246.1;Name=WP_002210246.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002210246.1;transl_table=11 NC_005810.1 RefSeq gene 2600048 2601751 . - . ID=gene2417;Name=YP_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12130;old_locus_tag=YP2338%2CYP_2338 NC_005810.1 Protein Homology CDS 2600048 2601751 . - 0 ID=cds2364;Parent=gene2417;Dbxref=Genbank:WP_002230974.1;Name=WP_002230974.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_002230974.1;transl_table=11 NC_005810.1 RefSeq gene 2601979 2603346 . - . ID=gene2418;Name=YP_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12135;old_locus_tag=YP2339%2CYP_2339 NC_005810.1 Protein Homology CDS 2601979 2603346 . - 0 ID=cds2365;Parent=gene2418;Dbxref=Genbank:WP_002210248.1;Name=WP_002210248.1;gbkey=CDS;product=menaquinone-specific isochorismate synthase;protein_id=WP_002210248.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2603551 2603582 . + . ID=id481;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2603859 2604503 . - . ID=gene2419;Name=YP_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12140;old_locus_tag=YP2340%2CYP_2340 NC_005810.1 Protein Homology CDS 2603859 2604503 . - 0 ID=cds2366;Parent=gene2419;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11 NC_005810.1 RefSeq gene 2605058 2605366 . - . ID=gene2420;Name=YP_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12145;old_locus_tag=YP2341%2CYP_2341 NC_005810.1 Protein Homology CDS 2605058 2605366 . - 0 ID=cds2367;Parent=gene2420;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11 NC_005810.1 RefSeq gene 2605930 2606073 . + . ID=gene2421;Name=YP_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12150 NC_005810.1 Protein Homology CDS 2605930 2606073 . + 0 ID=cds2368;Parent=gene2421;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11 NC_005810.1 RefSeq gene 2606014 2606226 . - . ID=gene2422;Name=YP_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12155;old_locus_tag=YP2343%2CYP_2343 NC_005810.1 Protein Homology CDS 2606014 2606226 . - 0 ID=cds2369;Parent=gene2422;Dbxref=Genbank:WP_002215888.1;Name=WP_002215888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215888.1;transl_table=11 NC_005810.1 RefSeq gene 2606292 2608163 . - . ID=gene2423;Name=YP_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12160;old_locus_tag=YP2344%2CYP_2344 NC_005810.1 Protein Homology CDS 2606292 2608163 . - 0 ID=cds2370;Parent=gene2423;Dbxref=Genbank:WP_002210254.1;Name=WP_002210254.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_002210254.1;transl_table=11 NC_005810.1 RefSeq gene 2608173 2608687 . - . ID=gene2424;Name=YP_RS12165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS12165;old_locus_tag=YP2345;pseudo=true NC_005810.1 Protein Homology CDS 2608173 2608687 . - 0 ID=cds2371;Parent=gene2424;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2608717 2610033 . - . ID=gene2425;Name=YP_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12170;old_locus_tag=YP2346%2CYP_2346 NC_005810.1 Protein Homology CDS 2608717 2610033 . - 0 ID=cds2372;Parent=gene2425;Dbxref=Genbank:WP_002215889.1;Name=WP_002215889.1;gbkey=CDS;product=2-ketogluconate transporter;protein_id=WP_002215889.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2610386 2610558 . + . ID=id482;gbkey=repeat_region NC_005810.1 RefSeq gene 2610579 2611529 . - . ID=gene2426;Name=YP_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12175;old_locus_tag=YP2347%2CYP_2347 NC_005810.1 Protein Homology CDS 2610579 2611529 . - 0 ID=cds2373;Parent=gene2426;Dbxref=Genbank:WP_002210257.1;Name=WP_002210257.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002210257.1;transl_table=11 NC_005810.1 RefSeq gene 2611548 2611670 . - . ID=gene2427;Name=YP_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12180 NC_005810.1 Protein Homology CDS 2611548 2611670 . - 0 ID=cds2374;Parent=gene2427;Dbxref=Genbank:WP_002210258.1;Name=WP_002210258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210258.1;transl_table=11 NC_005810.1 RefSeq gene 2611995 2612987 . - . ID=gene2428;Name=YP_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12185;old_locus_tag=YP2348%2CYP_2348 NC_005810.1 Protein Homology CDS 2611995 2612987 . - 0 ID=cds2375;Parent=gene2428;Dbxref=Genbank:WP_002210260.1;Name=WP_002210260.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210260.1;transl_table=11 NC_005810.1 RefSeq gene 2613456 2614739 . + . ID=gene2429;Name=YP_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12190;old_locus_tag=YP2349%2CYP_2349 NC_005810.1 Protein Homology CDS 2613456 2614739 . + 0 ID=cds2376;Parent=gene2429;Dbxref=Genbank:WP_002210262.1;Name=WP_002210262.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210262.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2615292 2615469 . + . ID=id483;gbkey=repeat_region NC_005810.1 RefSeq gene 2615498 2616262 . + . ID=gene2430;Name=YP_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12195;old_locus_tag=YP2350%2CYP_2350 NC_005810.1 Protein Homology CDS 2615498 2616262 . + 0 ID=cds2377;Parent=gene2430;Dbxref=Genbank:WP_002210264.1;Name=WP_002210264.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_002210264.1;transl_table=11 NC_005810.1 RefSeq gene 2616311 2616847 . + . ID=gene2431;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YP_RS12200;old_locus_tag=YP2351%2CYP_2351 NC_005810.1 Protein Homology CDS 2616311 2616847 . + 0 ID=cds2378;Parent=gene2431;Dbxref=Genbank:WP_002210265.1;Name=WP_002210265.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_002210265.1;transl_table=11 NC_005810.1 RefSeq gene 2616925 2617392 . + . ID=gene2432;Name=YP_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12205;old_locus_tag=YP2352%2CYP_2352 NC_005810.1 Protein Homology CDS 2616925 2617392 . + 0 ID=cds2379;Parent=gene2432;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2617401 2617435 . + . ID=id484;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2617602 2617635 . + . ID=id485;Note=exact repeat region containing 2 copies of a 17 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2617730 2618920 . - . ID=gene2433;Name=YP_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12210;old_locus_tag=YP2353%2CYP_2353 NC_005810.1 Protein Homology CDS 2617730 2618920 . - 0 ID=cds2380;Parent=gene2433;Dbxref=Genbank:WP_002210267.1;Name=WP_002210267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210267.1;transl_table=11 NC_005810.1 RefSeq gene 2619156 2620619 . - . ID=gene2434;Name=YP_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12215;old_locus_tag=YP2354%2CYP_2354 NC_005810.1 Protein Homology CDS 2619156 2620619 . - 0 ID=cds2381;Parent=gene2434;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11 NC_005810.1 RefSeq gene 2620626 2622158 . - . ID=gene2435;Name=YP_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12220;old_locus_tag=YP2355%2CYP_2355 NC_005810.1 Protein Homology CDS 2620626 2622158 . - 0 ID=cds2382;Parent=gene2435;Dbxref=Genbank:WP_002210269.1;Name=WP_002210269.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NC_005810.1 RefSeq gene 2622198 2624042 . - . ID=gene2436;Name=YP_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12225;old_locus_tag=YP2356%2CYP_2356 NC_005810.1 Protein Homology CDS 2622198 2624042 . - 0 ID=cds2383;Parent=gene2436;Dbxref=Genbank:WP_002210270.1;Name=WP_002210270.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_002210270.1;transl_table=11 NC_005810.1 RefSeq gene 2624039 2624341 . - . ID=gene2437;Name=YP_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12230;old_locus_tag=YP2357%2CYP_2357 NC_005810.1 Protein Homology CDS 2624039 2624341 . - 0 ID=cds2384;Parent=gene2437;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11 NC_005810.1 RefSeq gene 2624338 2624883 . - . ID=gene2438;Name=YP_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12235;old_locus_tag=YP2358%2CYP_2358 NC_005810.1 Protein Homology CDS 2624338 2624883 . - 0 ID=cds2385;Parent=gene2438;Dbxref=Genbank:WP_002210272.1;Name=WP_002210272.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NC_005810.1 RefSeq gene 2624896 2625438 . - . ID=gene2439;Name=YP_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12240;old_locus_tag=YP2359%2CYP_2359 NC_005810.1 Protein Homology CDS 2624896 2625438 . - 0 ID=cds2386;Parent=gene2439;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11 NC_005810.1 RefSeq gene 2625453 2626430 . - . ID=gene2440;Name=YP_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12245;old_locus_tag=YP2360%2CYP_2360 NC_005810.1 Protein Homology CDS 2625453 2626430 . - 0 ID=cds2387;Parent=gene2440;Dbxref=Genbank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_002210274.1;transl_table=11 NC_005810.1 RefSeq gene 2626427 2629171 . - . ID=gene2441;Name=YP_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12250;old_locus_tag=YP2361%2CYP_2361 NC_005810.1 Protein Homology CDS 2626427 2629171 . - 0 ID=cds2388;Parent=gene2441;Dbxref=Genbank:WP_002210275.1;Name=WP_002210275.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_002210275.1;transl_table=11 NC_005810.1 RefSeq gene 2629258 2630643 . - . ID=gene2442;Name=YP_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12255;old_locus_tag=YP2362%2CYP_2362 NC_005810.1 Protein Homology CDS 2629258 2630643 . - 0 ID=cds2389;Parent=gene2442;Dbxref=Genbank:WP_002210276.1;Name=WP_002210276.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_002210276.1;transl_table=11 NC_005810.1 RefSeq gene 2630640 2631203 . - . ID=gene2443;Name=YP_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12260;old_locus_tag=YP2363%2CYP_2363 NC_005810.1 Protein Homology CDS 2630640 2631203 . - 0 ID=cds2390;Parent=gene2443;Dbxref=Genbank:WP_002228514.1;Name=WP_002228514.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_002228514.1;transl_table=11 NC_005810.1 RefSeq gene 2631206 2633002 . - . ID=gene2444;Name=YP_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12265;old_locus_tag=YP2364%2CYP_2364 NC_005810.1 Protein Homology CDS 2631206 2633002 . - 0 ID=cds2391;Parent=gene2444;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NC_005810.1 RefSeq gene 2633143 2633820 . - . ID=gene2445;Name=YP_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12270;old_locus_tag=YP2365%2CYP_2365 NC_005810.1 Protein Homology CDS 2633143 2633820 . - 0 ID=cds2392;Parent=gene2445;Dbxref=Genbank:WP_002210278.1;Name=WP_002210278.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002210278.1;transl_table=11 NC_005810.1 RefSeq gene 2633922 2634422 . - . ID=gene2446;Name=YP_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12275;old_locus_tag=YP2366%2CYP_2366 NC_005810.1 Protein Homology CDS 2633922 2634422 . - 0 ID=cds2393;Parent=gene2446;Dbxref=Genbank:WP_002210279.1;Name=WP_002210279.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NC_005810.1 RefSeq gene 2635100 2636044 . - . ID=gene2447;Name=YP_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12280;old_locus_tag=YP2367%2CYP_2367 NC_005810.1 Protein Homology CDS 2635100 2636044 . - 0 ID=cds2394;Parent=gene2447;Dbxref=Genbank:WP_002230980.1;Name=WP_002230980.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230980.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2635932 2635961 . + . ID=id486;gbkey=repeat_region NC_005810.1 RefSeq gene 2636495 2636767 . - . ID=gene2448;Name=YP_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12285;old_locus_tag=YP2368%2CYP_2368 NC_005810.1 Protein Homology CDS 2636495 2636767 . - 0 ID=cds2395;Parent=gene2448;Dbxref=Genbank:WP_002217838.1;Name=WP_002217838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217838.1;transl_table=11 NC_005810.1 RefSeq gene 2636900 2638114 . + . ID=gene2449;Name=YP_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12290;old_locus_tag=YP2369%2CYP_2369 NC_005810.1 Protein Homology CDS 2636900 2638114 . + 0 ID=cds2396;Parent=gene2449;Dbxref=Genbank:WP_002210282.1;Name=WP_002210282.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=WP_002210282.1;transl_table=11 NC_005810.1 RefSeq gene 2638265 2638858 . + . ID=gene2450;Name=YP_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12295;old_locus_tag=YP2370%2CYP_2370 NC_005810.1 Protein Homology CDS 2638265 2638858 . + 0 ID=cds2397;Parent=gene2450;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11 NC_005810.1 RefSeq gene 2638905 2639096 . - . ID=gene2451;Name=YP_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12300;old_locus_tag=YP2371 NC_005810.1 Protein Homology CDS 2638905 2639096 . - 0 ID=cds2398;Parent=gene2451;Dbxref=Genbank:WP_002216053.1;Name=WP_002216053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216053.1;transl_table=11 NC_005810.1 RefSeq gene 2639201 2641033 . - . ID=gene2452;Name=YP_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12305;old_locus_tag=YP2372%2CYP_2372 NC_005810.1 Protein Homology CDS 2639201 2641033 . - 0 ID=cds2399;Parent=gene2452;Dbxref=Genbank:WP_002227880.1;Name=WP_002227880.1;gbkey=CDS;product=citrate transporter;protein_id=WP_002227880.1;transl_table=11 NC_005810.1 RefSeq gene 2641325 2641981 . - . ID=gene2453;Name=YP_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12310;old_locus_tag=YP2373%2CYP_2373 NC_005810.1 Protein Homology CDS 2641325 2641981 . - 0 ID=cds2400;Parent=gene2453;Dbxref=Genbank:WP_002210285.1;Name=WP_002210285.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210285.1;transl_table=11 NC_005810.1 RefSeq gene 2642146 2642640 . - . ID=gene2454;Name=YP_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12315;old_locus_tag=YP2374%2CYP_2374 NC_005810.1 Protein Homology CDS 2642146 2642640 . - 0 ID=cds2401;Parent=gene2454;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2642877 2642896 . + . ID=id487;Note=exact repeat region containing 2 copies of a 10 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2642948 2643403 . - . ID=gene2455;Name=YP_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12320;old_locus_tag=YP2375%2CYP_2375 NC_005810.1 Protein Homology CDS 2642948 2643403 . - 0 ID=cds2402;Parent=gene2455;Dbxref=Genbank:WP_002210287.1;Name=WP_002210287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210287.1;transl_table=11 NC_005810.1 RefSeq gene 2643644 2643835 . + . ID=gene2456;Name=YP_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12325;old_locus_tag=YP2376%2CYP_2376 NC_005810.1 Protein Homology CDS 2643644 2643835 . + 0 ID=cds2403;Parent=gene2456;Dbxref=Genbank:WP_002216055.1;Name=WP_002216055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216055.1;transl_table=11 NC_005810.1 RefSeq gene 2643825 2645027 . + . ID=gene2457;Name=YP_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12330;old_locus_tag=YP2377%2CYP_2377 NC_005810.1 Protein Homology CDS 2643825 2645027 . + 0 ID=cds2404;Parent=gene2457;Dbxref=Genbank:WP_002210288.1;Name=WP_002210288.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_002210288.1;transl_table=11 NC_005810.1 RefSeq gene 2645210 2647348 . + . ID=gene2458;Name=YP_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12335;old_locus_tag=YP2378%2CYP_2378 NC_005810.1 Protein Homology CDS 2645210 2647348 . + 0 ID=cds2405;Parent=gene2458;Dbxref=Genbank:WP_002265141.1;Name=WP_002265141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2647362 2647532 . + . ID=id488;gbkey=repeat_region NC_005810.1 RefSeq gene 2647614 2648648 . - . ID=gene2459;Name=YP_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12340;old_locus_tag=YP2379%2CYP_2379 NC_005810.1 Protein Homology CDS 2647614 2648648 . - 0 ID=cds2406;Parent=gene2459;Dbxref=Genbank:WP_002216059.1;Name=WP_002216059.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002216059.1;transl_table=11 NC_005810.1 RefSeq gene 2649015 2649458 . + . ID=gene2460;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=YP_RS12345;old_locus_tag=YP2380%2CYP_2380 NC_005810.1 Protein Homology CDS 2649015 2649458 . + 0 ID=cds2407;Parent=gene2460;Dbxref=Genbank:WP_002210291.1;Name=WP_002210291.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_002210291.1;transl_table=11 NC_005810.1 RefSeq gene 2649627 2649914 . + . ID=gene2461;Name=YP_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12350;old_locus_tag=YP2381%2CYP_2381 NC_005810.1 Protein Homology CDS 2649627 2649914 . + 0 ID=cds2408;Parent=gene2461;Dbxref=Genbank:WP_002264679.1;Name=WP_002264679.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002264679.1;transl_table=11 NC_005810.1 RefSeq gene 2649927 2651183 . + . ID=gene2462;Name=YP_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12355;old_locus_tag=YP2382%2CYP_2382 NC_005810.1 Protein Homology CDS 2649927 2651183 . + 0 ID=cds2409;Parent=gene2462;Dbxref=Genbank:WP_011171881.1;Name=WP_011171881.1;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;protein_id=WP_011171881.1;transl_table=11 NC_005810.1 RefSeq gene 2651300 2651848 . - . ID=gene2463;Name=YP_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12360;old_locus_tag=YP2383%2CYP_2383 NC_005810.1 Protein Homology CDS 2651300 2651848 . - 0 ID=cds2410;Parent=gene2463;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11 NC_005810.1 RefSeq gene 2652070 2652657 . - . ID=gene2464;Name=YP_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12365;old_locus_tag=YP2384%2CYP_2384 NC_005810.1 Protein Homology CDS 2652070 2652657 . - 0 ID=cds2411;Parent=gene2464;Dbxref=Genbank:WP_002225358.1;Name=WP_002225358.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002225358.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2652434 2652505 . + . ID=id489;Note=exact repeat region containing 2 copies of a 36 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2652845 2653537 . - . ID=gene2465;Name=YP_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12370;old_locus_tag=YP2385%2CYP_2385 NC_005810.1 Protein Homology CDS 2652845 2653537 . - 0 ID=cds2412;Parent=gene2465;Dbxref=Genbank:WP_002209740.1;Name=WP_002209740.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_002209740.1;transl_table=11 NC_005810.1 RefSeq gene 2653891 2654799 . + . ID=gene2466;Name=YP_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12375;old_locus_tag=YP2386%2CYP_2386 NC_005810.1 Protein Homology CDS 2653891 2654799 . + 0 ID=cds2413;Parent=gene2466;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2654863 2654894 . + . ID=id490;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2654923 2655720 . - . ID=gene2467;Name=YP_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12380;old_locus_tag=YP2387%2CYP_2387 NC_005810.1 Protein Homology CDS 2654923 2655720 . - 0 ID=cds2414;Parent=gene2467;Dbxref=Genbank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_002209738.1;transl_table=11 NC_005810.1 RefSeq gene 2655734 2656450 . - . ID=gene2468;Name=YP_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12385;old_locus_tag=YP2388%2CYP_2388 NC_005810.1 Protein Homology CDS 2655734 2656450 . - 0 ID=cds2415;Parent=gene2468;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11 NC_005810.1 RefSeq gene 2656447 2657133 . - . ID=gene2469;Name=YP_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12390;old_locus_tag=YP2389%2CYP_2389 NC_005810.1 Protein Homology CDS 2656447 2657133 . - 0 ID=cds2416;Parent=gene2469;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NC_005810.1 RefSeq gene 2657236 2658018 . - . ID=gene2470;Name=YP_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12395;old_locus_tag=YP2390 NC_005810.1 Protein Homology CDS 2657236 2658018 . - 0 ID=cds2417;Parent=gene2470;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2658461 2658502 . + . ID=id491;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2658543 2659115 . - . ID=gene2471;Name=YP_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12400;old_locus_tag=YP2391%2CYP_2391 NC_005810.1 Protein Homology CDS 2658543 2659115 . - 0 ID=cds2418;Parent=gene2471;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2659313 2659342 . + . ID=id492;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2659362 2660879 . - . ID=gene2472;Name=YP_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12405;old_locus_tag=YP2392%2CYP_2392 NC_005810.1 Protein Homology CDS 2659362 2660879 . - 0 ID=cds2419;Parent=gene2472;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NC_005810.1 RefSeq gene 2660892 2661401 . - . ID=gene2473;Name=YP_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12410;old_locus_tag=YP2393%2CYP_2393 NC_005810.1 Protein Homology CDS 2660892 2661401 . - 0 ID=cds2420;Parent=gene2473;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2661651 2661695 . + . ID=id493;Note=degenerate repeat region containing 3 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2661713 2662435 . - . ID=gene2474;Name=YP_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12415;old_locus_tag=YP2394%2CYP_2394 NC_005810.1 Protein Homology CDS 2661713 2662435 . - 0 ID=cds2421;Parent=gene2474;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NC_005810.1 RefSeq gene 2662555 2663859 . - . ID=gene2475;Name=YP_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12420;old_locus_tag=YP2395%2CYP_2395 NC_005810.1 Protein Homology CDS 2662555 2663859 . - 0 ID=cds2422;Parent=gene2475;Dbxref=Genbank:WP_002209730.1;Name=WP_002209730.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2663128 2663163 . + . ID=id494;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2664108 2665022 . - . ID=gene2476;Name=YP_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12425;old_locus_tag=YP2396%2CYP_2396 NC_005810.1 Protein Homology CDS 2664108 2665022 . - 0 ID=cds2423;Parent=gene2476;Dbxref=Genbank:WP_002209729.1;Name=WP_002209729.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NC_005810.1 RefSeq gene 2665253 2665915 . - . ID=gene2477;Name=YP_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12430;old_locus_tag=YP2397%2CYP_2397 NC_005810.1 Protein Homology CDS 2665253 2665915 . - 0 ID=cds2424;Parent=gene2477;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11 NC_005810.1 RefSeq gene 2666072 2666902 . - . ID=gene2478;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=YP_RS12435;old_locus_tag=YP2398%2CYP_2398 NC_005810.1 Protein Homology CDS 2666072 2666902 . - 0 ID=cds2425;Parent=gene2478;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11 NC_005810.1 RefSeq gene 2666953 2667963 . - . ID=gene2479;Name=YP_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12440;old_locus_tag=YP2399%2CYP_2399 NC_005810.1 Protein Homology CDS 2666953 2667963 . - 0 ID=cds2426;Parent=gene2479;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NC_005810.1 RefSeq gene 2668133 2669260 . - . ID=gene2480;Name=YP_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12445;old_locus_tag=YP2400%2CYP_2400 NC_005810.1 Protein Homology CDS 2668133 2669260 . - 0 ID=cds2427;Parent=gene2480;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11 NC_005810.1 RefSeq gene 2669307 2670092 . - . ID=gene2481;Name=YP_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12450;old_locus_tag=YP2401%2CYP_2401 NC_005810.1 Protein Homology CDS 2669307 2670092 . - 0 ID=cds2428;Parent=gene2481;Dbxref=Genbank:WP_002230992.1;Name=WP_002230992.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002230992.1;transl_table=11 NC_005810.1 RefSeq gene 2670079 2670240 . - . ID=gene2482;Name=YP_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12455 NC_005810.1 Protein Homology CDS 2670079 2670240 . - 0 ID=cds2429;Parent=gene2482;Dbxref=Genbank:WP_002209723.1;Name=WP_002209723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209723.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2670139 2670180 . + . ID=id495;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2670318 2671235 . + . ID=gene2483;Name=YP_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12460;old_locus_tag=YP2402%2CYP_2402 NC_005810.1 Protein Homology CDS 2670318 2671235 . + 0 ID=cds2430;Parent=gene2483;Dbxref=Genbank:WP_002209722.1;Name=WP_002209722.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002209722.1;transl_table=11 NC_005810.1 RefSeq gene 2671521 2672558 . + . ID=gene2484;Name=YP_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12465;old_locus_tag=YP2403%2CYP_2403 NC_005810.1 Protein Homology CDS 2671521 2672558 . + 0 ID=cds2431;Parent=gene2484;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11 NC_005810.1 RefSeq gene 2672900 2673430 . - . ID=gene2485;Name=YP_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12470;old_locus_tag=YP2404%2CYP_2404 NC_005810.1 Protein Homology CDS 2672900 2673430 . - 0 ID=cds2432;Parent=gene2485;Dbxref=Genbank:WP_002209720.1;Name=WP_002209720.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_002209720.1;transl_table=11 NC_005810.1 RefSeq gene 2674221 2674913 . + . ID=gene2486;Name=YP_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12475;old_locus_tag=YP2405%2CYP_2405 NC_005810.1 Protein Homology CDS 2674221 2674913 . + 0 ID=cds2433;Parent=gene2486;Dbxref=Genbank:WP_002209718.1;Name=WP_002209718.1;gbkey=CDS;product=racemase;protein_id=WP_002209718.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2675085 2675256 . + . ID=id496;gbkey=repeat_region NC_005810.1 RefSeq gene 2675321 2676544 . - . ID=gene2487;Name=YP_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12480;old_locus_tag=YP2406%2CYP_2406 NC_005810.1 Protein Homology CDS 2675321 2676544 . - 0 ID=cds2434;Parent=gene2487;Dbxref=Genbank:WP_002209717.1;Name=WP_002209717.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002209717.1;transl_table=11 NC_005810.1 RefSeq gene 2676716 2678785 . + . ID=gene2488;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=YP_RS12485;old_locus_tag=YP2407%2CYP_2407 NC_005810.1 Protein Homology CDS 2676716 2678785 . + 0 ID=cds2435;Parent=gene2488;Dbxref=Genbank:WP_002209716.1;Name=WP_002209716.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_002209716.1;transl_table=11 NC_005810.1 RefSeq gene 2678963 2679241 . - . ID=gene2489;Name=YP_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12490;old_locus_tag=YP2408%2CYP_2408 NC_005810.1 Protein Homology CDS 2678963 2679241 . - 0 ID=cds2436;Parent=gene2489;Dbxref=Genbank:WP_041175916.1;Name=WP_041175916.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175916.1;transl_table=11 NC_005810.1 RefSeq gene 2679299 2679841 . - . ID=gene2490;Name=YP_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12495;old_locus_tag=YP2409%2CYP_2409 NC_005810.1 Protein Homology CDS 2679299 2679841 . - 0 ID=cds2437;Parent=gene2490;Dbxref=Genbank:WP_002209714.1;Name=WP_002209714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209714.1;transl_table=11 NC_005810.1 RefSeq gene 2679941 2680747 . - . ID=gene2491;Name=YP_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12500;old_locus_tag=YP2410%2CYP_2410 NC_005810.1 Protein Homology CDS 2679941 2680747 . - 0 ID=cds2438;Parent=gene2491;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11 NC_005810.1 RefSeq gene 2680751 2681578 . - . ID=gene2492;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YP_RS12505;old_locus_tag=YP2411%2CYP_2411 NC_005810.1 Protein Homology CDS 2680751 2681578 . - 0 ID=cds2439;Parent=gene2492;Dbxref=Genbank:WP_002225365.1;Name=WP_002225365.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11 NC_005810.1 RefSeq gene 2681584 2682669 . - . ID=gene2493;Name=YP_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12510;old_locus_tag=YP2412%2CYP_2412 NC_005810.1 Protein Homology CDS 2681584 2682669 . - 0 ID=cds2440;Parent=gene2493;Dbxref=Genbank:WP_002209711.1;Name=WP_002209711.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NC_005810.1 RefSeq gene 2682746 2683678 . - . ID=gene2494;Name=YP_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12515;old_locus_tag=YP2413%2CYP_2413 NC_005810.1 Protein Homology CDS 2682746 2683678 . - 0 ID=cds2441;Parent=gene2494;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NC_005810.1 RefSeq gene 2684048 2684578 . + . ID=gene2495;Name=YP_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12520;old_locus_tag=YP2414%2CYP_2414 NC_005810.1 Protein Homology CDS 2684048 2684578 . + 0 ID=cds2442;Parent=gene2495;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2684720 2684927 . + . ID=id497;Note=degenerate repeat region containing 26 copies of a 8bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2684751 2684906 . - . ID=gene2496;Name=YP_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12525;old_locus_tag=YP2415%2CYP_2415 NC_005810.1 Protein Homology CDS 2684751 2684906 . - 0 ID=cds2443;Parent=gene2496;Dbxref=Genbank:WP_011171883.1;Name=WP_011171883.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171883.1;transl_table=11 NC_005810.1 RefSeq gene 2685020 2685511 . - . ID=gene2497;Name=YP_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12530;old_locus_tag=YP2416%2CYP_2416 NC_005810.1 Protein Homology CDS 2685020 2685511 . - 0 ID=cds2444;Parent=gene2497;Dbxref=Genbank:WP_002209707.1;Name=WP_002209707.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_002209707.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2686010 2686054 . + . ID=id498;Note=degenerate repeat region containing 3 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2686079 2688403 . - . ID=gene2498;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YP_RS12535;old_locus_tag=YP2417%2CYP_2417 NC_005810.1 Protein Homology CDS 2686079 2688403 . - 0 ID=cds2445;Parent=gene2498;Dbxref=Genbank:WP_002209705.1;Name=WP_002209705.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002209705.1;transl_table=11 NC_005810.1 RefSeq gene 2688403 2689713 . - . ID=gene2499;Name=YP_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12540;old_locus_tag=YP2418%2CYP_2418 NC_005810.1 Protein Homology CDS 2688403 2689713 . - 0 ID=cds2446;Parent=gene2499;Dbxref=Genbank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_002209704.1;transl_table=11 NC_005810.1 RefSeq gene 2690000 2690284 . - . ID=gene2500;Name=YP_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12545;old_locus_tag=YP2419%2CYP_2419 NC_005810.1 Protein Homology CDS 2690000 2690284 . - 0 ID=cds2447;Parent=gene2500;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11 NC_005810.1 RefSeq gene 2690710 2691975 . + . ID=gene2501;Name=YP_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12550;old_locus_tag=YP2420%2CYP_2420 NC_005810.1 Protein Homology CDS 2690710 2691975 . + 0 ID=cds2448;Parent=gene2501;Dbxref=Genbank:WP_002209702.1;Name=WP_002209702.1;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=WP_002209702.1;transl_table=11 NC_005810.1 RefSeq gene 2692082 2692846 . - . ID=gene2502;Name=YP_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12555;old_locus_tag=YP2421%2CYP_2421 NC_005810.1 Protein Homology CDS 2692082 2692846 . - 0 ID=cds2449;Parent=gene2502;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11 NC_005810.1 RefSeq gene 2692882 2694108 . - . ID=gene2503;Name=YP_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12560;old_locus_tag=YP2422%2CYP_2422 NC_005810.1 Protein Homology CDS 2692882 2694108 . - 0 ID=cds2450;Parent=gene2503;Dbxref=Genbank:WP_002209700.1;Name=WP_002209700.1;gbkey=CDS;product=cytochrome C;protein_id=WP_002209700.1;transl_table=11 NC_005810.1 RefSeq gene 2694108 2694620 . - . ID=gene2504;Name=YP_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12565;old_locus_tag=YP2423%2CYP_2423 NC_005810.1 Protein Homology CDS 2694108 2694620 . - 0 ID=cds2451;Parent=gene2504;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2694146 2694175 . + . ID=id499;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2694617 2695183 . - . ID=gene2505;Name=YP_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12570;old_locus_tag=YP2424%2CYP_2424 NC_005810.1 Protein Homology CDS 2694617 2695183 . - 0 ID=cds2452;Parent=gene2505;Dbxref=Genbank:WP_011171884.1;Name=WP_011171884.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein;protein_id=WP_011171884.1;transl_table=11 NC_005810.1 RefSeq gene 2695180 2697150 . - . ID=gene2506;Name=YP_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12575;old_locus_tag=YP2425%2CYP_2425 NC_005810.1 Protein Homology CDS 2695180 2697150 . - 0 ID=cds2453;Parent=gene2506;Dbxref=Genbank:WP_002209698.1;Name=WP_002209698.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=heme lyase subunit CcmF;protein_id=WP_002209698.1;transl_table=11 NC_005810.1 RefSeq gene 2697147 2697641 . - . ID=gene2507;Name=YP_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12580;old_locus_tag=YP2426%2CYP_2426 NC_005810.1 Protein Homology CDS 2697147 2697641 . - 0 ID=cds2454;Parent=gene2507;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11 NC_005810.1 RefSeq gene 2697638 2697940 . - . ID=gene2508;Name=YP_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12585;old_locus_tag=YP2427%2CYP_2427 NC_005810.1 Protein Homology CDS 2697638 2697940 . - 0 ID=cds2455;Parent=gene2508;Dbxref=Genbank:WP_002209696.1;Name=WP_002209696.1;gbkey=CDS;product=heme exporter protein D;protein_id=WP_002209696.1;transl_table=11 NC_005810.1 RefSeq gene 2697937 2698674 . - . ID=gene2509;Name=YP_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12590;old_locus_tag=YP2428%2CYP_2428 NC_005810.1 Protein Homology CDS 2697937 2698674 . - 0 ID=cds2456;Parent=gene2509;Dbxref=Genbank:WP_002209695.1;Name=WP_002209695.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_002209695.1;transl_table=11 NC_005810.1 RefSeq gene 2698737 2699396 . - . ID=gene2510;Name=YP_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12595;old_locus_tag=YP2429%2CYP_2429 NC_005810.1 Protein Homology CDS 2698737 2699396 . - 0 ID=cds2457;Parent=gene2510;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11 NC_005810.1 RefSeq gene 2699366 2700022 . - . ID=gene2511;Name=YP_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12600;old_locus_tag=YP2430%2CYP_2430 NC_005810.1 Protein Homology CDS 2699366 2700022 . - 0 ID=cds2458;Parent=gene2511;Dbxref=Genbank:WP_002209693.1;Name=WP_002209693.1;gbkey=CDS;product=cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=WP_002209693.1;transl_table=11 NC_005810.1 RefSeq gene 2700467 2700934 . - . ID=gene2512;Name=YP_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12605;old_locus_tag=YP2431%2CYP_2431 NC_005810.1 Protein Homology CDS 2700467 2700934 . - 0 ID=cds2459;Parent=gene2512;Dbxref=Genbank:WP_002209692.1;Name=WP_002209692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209692.1;transl_table=11 NC_005810.1 RefSeq gene 2701189 2701263 . - . ID=gene2513;Name=YP_RS12610;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS12610;old_locus_tag=tRNA-Arg_4%2CYP_t41 NC_005810.1 tRNAscan-SE tRNA 2701189 2701263 . - . ID=rna48;Parent=gene2513;anticodon=(pos:complement(2701228..2701230));gbkey=tRNA;product=tRNA-Arg NC_005810.1 tRNAscan-SE exon 2701189 2701263 . - . ID=id500;Parent=rna48;anticodon=(pos:complement(2701228..2701230));gbkey=tRNA;product=tRNA-Arg NC_005810.1 RefSeq gene 2701550 2702092 . + . ID=gene2514;Name=YP_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12615;old_locus_tag=YP2432%2CYP_2432 NC_005810.1 Protein Homology CDS 2701550 2702092 . + 0 ID=cds2460;Parent=gene2514;Dbxref=Genbank:WP_002209691.1;Name=WP_002209691.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209691.1;transl_table=11 NC_005810.1 RefSeq gene 2702293 2704134 . + . ID=gene2515;Name=YP_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12620;old_locus_tag=YP2433 NC_005810.1 Protein Homology CDS 2702293 2704134 . + 0 ID=cds2461;Parent=gene2515;Dbxref=Genbank:WP_002373713.1;Name=WP_002373713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002373713.1;transl_table=11 NC_005810.1 RefSeq gene 2704510 2704851 . + . ID=gene2516;Name=YP_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12625;old_locus_tag=YP2434%2CYP_2434 NC_005810.1 Protein Homology CDS 2704510 2704851 . + 0 ID=cds2462;Parent=gene2516;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11 NC_005810.1 RefSeq gene 2704926 2705225 . - . ID=gene2517;Name=YP_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12630 NC_005810.1 Protein Homology CDS 2704926 2705225 . - 0 ID=cds2463;Parent=gene2517;Dbxref=Genbank:WP_042659211.1;Name=WP_042659211.1;gbkey=CDS;product=membrane protein;protein_id=WP_042659211.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2705188 2706509 . + . ID=id501;gbkey=repeat_region NC_005810.1 RefSeq region 2705190 2706504 . - . ID=id502;gbkey=mobile_element NC_005810.1 RefSeq gene 2705225 2706433 . - . ID=gene2518;Name=YP_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12635;old_locus_tag=YP2436%2CYP_2436 NC_005810.1 Protein Homology CDS 2705225 2706433 . - 0 ID=cds2464;Parent=gene2518;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2706621 2707100 . - . ID=gene2519;Name=YP_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12640;old_locus_tag=YP2437%2CYP_2437 NC_005810.1 Protein Homology CDS 2706621 2707100 . - 0 ID=cds2465;Parent=gene2519;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2707149 2707228 . + . ID=id503;Note=degenerate repeat region containing 5 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2707213 2708019 . - . ID=gene2520;Name=YP_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12645;old_locus_tag=YP2438%2CYP_2438 NC_005810.1 Protein Homology CDS 2707213 2708019 . - 0 ID=cds2466;Parent=gene2520;Dbxref=Genbank:WP_002209685.1;Name=WP_002209685.1;gbkey=CDS;product=ImpE family protein;protein_id=WP_002209685.1;transl_table=11 NC_005810.1 RefSeq gene 2708059 2708886 . - . ID=gene2521;Name=YP_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12650;old_locus_tag=YP2439%2CYP_2439 NC_005810.1 Protein Homology CDS 2708059 2708886 . - 0 ID=cds2467;Parent=gene2521;Dbxref=Genbank:WP_002231006.1;Name=WP_002231006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231006.1;transl_table=11 NC_005810.1 RefSeq gene 2708886 2709146 . - . ID=gene2522;Name=YP_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12655;old_locus_tag=YP2440%2CYP_2440 NC_005810.1 Protein Homology CDS 2708886 2709146 . - 0 ID=cds2468;Parent=gene2522;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11 NC_005810.1 RefSeq gene 2709245 2711578 . - . ID=gene2523;Name=YP_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12660;old_locus_tag=YP2441%2CYP_2441 NC_005810.1 Protein Homology CDS 2709245 2711578 . - 0 ID=cds2469;Parent=gene2523;Dbxref=Genbank:WP_011171885.1;Name=WP_011171885.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_011171885.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2709333 2709422 . + . ID=id504;Note=degenerate repeat region containing 5 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2711872 2715699 . - . ID=gene2524;Name=YP_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12665;old_locus_tag=YP2442%2CYP_2442 NC_005810.1 Protein Homology CDS 2711872 2715699 . - 0 ID=cds2470;Parent=gene2524;Dbxref=Genbank:WP_002214843.1;Name=WP_002214843.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002214843.1;transl_table=11 NC_005810.1 RefSeq gene 2715708 2716544 . - . ID=gene2525;Name=YP_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12670;old_locus_tag=YP2443 NC_005810.1 Protein Homology CDS 2715708 2716544 . - 0 ID=cds2471;Parent=gene2525;Dbxref=Genbank:WP_002209681.1;Name=WP_002209681.1;gbkey=CDS;product=polymerase;protein_id=WP_002209681.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2716485 2718449 . + . ID=id505;gbkey=repeat_region NC_005810.1 RefSeq region 2716495 2718447 . - . ID=id506;gbkey=mobile_element NC_005810.1 RefSeq gene 2716560 2717339 . - . ID=gene2526;Name=YP_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12675;old_locus_tag=YP2444%2CYP_2444 NC_005810.1 Protein Homology CDS 2716560 2717339 . - 0 ID=cds2472;Parent=gene2526;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 2717339 2718361 . - . ID=gene2527;Name=YP_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12680;old_locus_tag=YP2445%2CYP_2445 NC_005810.1 Protein Homology CDS 2717339 2718361 . - 0 ID=cds2473;Parent=gene2527;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 2718448 2719185 . + . ID=gene2528;Name=YP_RS12685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS12685;old_locus_tag=YP2446;partial=true;pseudo=true;start_range=.,2718448 NC_005810.1 Protein Homology CDS 2718448 2719185 . + 0 ID=cds2474;Parent=gene2528;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=allantoinase;pseudo=true;start_range=.,2718448;transl_table=11 NC_005810.1 RefSeq repeat_region 2719214 2719384 . + . ID=id507;gbkey=repeat_region NC_005810.1 RefSeq gene 2719415 2720419 . - . ID=gene2529;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YP_RS12690;old_locus_tag=YP2447%2CYP_2447 NC_005810.1 Protein Homology CDS 2719415 2720419 . - 0 ID=cds2475;Parent=gene2529;Dbxref=Genbank:WP_002215933.1;Name=WP_002215933.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002215933.1;transl_table=11 NC_005810.1 RefSeq gene 2720467 2721633 . - . ID=gene2530;Name=YP_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12695;old_locus_tag=YP2448%2CYP_2448 NC_005810.1 Protein Homology CDS 2720467 2721633 . - 0 ID=cds2476;Parent=gene2530;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11 NC_005810.1 RefSeq gene 2721626 2722825 . - . ID=gene2531;Name=YP_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12700;old_locus_tag=YP2449%2CYP_2449 NC_005810.1 Protein Homology CDS 2721626 2722825 . - 0 ID=cds2477;Parent=gene2531;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11 NC_005810.1 RefSeq gene 2723501 2724472 . - . ID=gene2532;Name=YP_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12705;old_locus_tag=YP2450%2CYP_2450 NC_005810.1 Protein Homology CDS 2723501 2724472 . - 0 ID=cds2478;Parent=gene2532;Dbxref=Genbank:WP_002212211.1;Name=WP_002212211.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2724522 2724611 . + . ID=id508;Note=degenerate repeat region containing 5 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2724615 2726765 . - . ID=gene2533;Name=YP_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12710;old_locus_tag=YP2451%2CYP_2451 NC_005810.1 Protein Homology CDS 2724615 2726765 . - 0 ID=cds2479;Parent=gene2533;Dbxref=Genbank:WP_002212212.1;Name=WP_002212212.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002212212.1;transl_table=11 NC_005810.1 RefSeq gene 2726747 2727151 . - . ID=gene2534;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YP_RS12715;old_locus_tag=YP2452%2CYP_2452 NC_005810.1 Protein Homology CDS 2726747 2727151 . - 0 ID=cds2480;Parent=gene2534;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11 NC_005810.1 RefSeq gene 2727165 2727401 . - . ID=gene2535;Name=YP_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12720;old_locus_tag=YP2453%2CYP_2453 NC_005810.1 Protein Homology CDS 2727165 2727401 . - 0 ID=cds2481;Parent=gene2535;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2727732 2727765 . + . ID=id509;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2727922 2728287 . + . ID=gene2536;Name=YP_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12725;old_locus_tag=YP2454%2CYP_2454 NC_005810.1 Protein Homology CDS 2727922 2728287 . + 0 ID=cds2482;Parent=gene2536;Dbxref=Genbank:WP_002212215.1;Name=WP_002212215.1;gbkey=CDS;product=acid shock protein;protein_id=WP_002212215.1;transl_table=11 NC_005810.1 RefSeq gene 2728765 2729100 . + . ID=gene2537;Name=YP_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12730;old_locus_tag=YP2455%2CYP_2455 NC_005810.1 Protein Homology CDS 2728765 2729100 . + 0 ID=cds2483;Parent=gene2537;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2729296 2730497 . + . ID=id510;gbkey=repeat_region NC_005810.1 RefSeq region 2729300 2730497 . - . ID=id511;gbkey=mobile_element NC_005810.1 RefSeq gene 2729335 2730459 . - . ID=gene2538;Name=YP_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12735;old_locus_tag=YP2457%2CYP_2457 NC_005810.1 Protein Homology CDS 2729335 2730459 . - 0 ID=cds2484;Parent=gene2538;Dbxref=Genbank:WP_011055514.1;Name=WP_011055514.1;gbkey=CDS;product=transposase;protein_id=WP_011055514.1;transl_table=11 NC_005810.1 RefSeq gene 2730453 2730944 . - . ID=gene2539;Name=YP_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12740;old_locus_tag=YP2458%2CYP_2458 NC_005810.1 Protein Homology CDS 2730453 2730944 . - 0 ID=cds2485;Parent=gene2539;Dbxref=Genbank:WP_011171887.1;Name=WP_011171887.1;gbkey=CDS;product=membrane protein;protein_id=WP_011171887.1;transl_table=11 NC_005810.1 RefSeq gene 2731109 2731447 . - . ID=gene2540;Name=YP_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12745;old_locus_tag=YP2459%2CYP_2459 NC_005810.1 Protein Homology CDS 2731109 2731447 . - 0 ID=cds2486;Parent=gene2540;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11 NC_005810.1 cmsearch region 2731777 2732238 . + . ID=id512;Note=cspA;gbkey=misc_feature NC_005810.1 RefSeq gene 2731955 2732167 . + . ID=gene2541;Name=YP_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12750;old_locus_tag=YP2460%2CYP_2460 NC_005810.1 Protein Homology CDS 2731955 2732167 . + 0 ID=cds2487;Parent=gene2541;Dbxref=Genbank:WP_002212220.1;Name=WP_002212220.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_002212220.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2732292 2732368 . + . ID=id513;Note=degenerate repeat region containing 11 copies of a 7bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2732629 2732668 . + . ID=id514;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2732988 2734565 . + . ID=gene2542;Name=YP_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12755;old_locus_tag=YP2461%2CYP_2461 NC_005810.1 Protein Homology CDS 2732988 2734565 . + 0 ID=cds2488;Parent=gene2542;Dbxref=Genbank:WP_002215276.1;Name=WP_002215276.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002215276.1;transl_table=11 NC_005810.1 RefSeq gene 2734550 2735533 . + . ID=gene2543;Name=YP_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12760;old_locus_tag=YP2462%2CYP_2462 NC_005810.1 Protein Homology CDS 2734550 2735533 . + 0 ID=cds2489;Parent=gene2543;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11 NC_005810.1 RefSeq gene 2735530 2736336 . + . ID=gene2544;Name=YP_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12765;old_locus_tag=YP2463%2CYP_2463 NC_005810.1 Protein Homology CDS 2735530 2736336 . + 0 ID=cds2490;Parent=gene2544;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NC_005810.1 RefSeq gene 2736336 2737142 . + . ID=gene2545;Name=YP_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12770;old_locus_tag=YP2464%2CYP_2464 NC_005810.1 Protein Homology CDS 2736336 2737142 . + 0 ID=cds2491;Parent=gene2545;Dbxref=Genbank:WP_002212225.1;Name=WP_002212225.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002212225.1;transl_table=11 NC_005810.1 RefSeq gene 2737135 2737800 . + . ID=gene2546;Name=YP_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12775;old_locus_tag=YP2465%2CYP_2465 NC_005810.1 Protein Homology CDS 2737135 2737800 . + 0 ID=cds2492;Parent=gene2546;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11 NC_005810.1 RefSeq gene 2738999 2739301 . + . ID=gene2547;Name=YP_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12780;old_locus_tag=YP2466%2CYP_2466 NC_005810.1 Protein Homology CDS 2738999 2739301 . + 0 ID=cds2493;Parent=gene2547;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NC_005810.1 RefSeq gene 2739354 2739788 . + . ID=gene2548;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YP_RS12785;old_locus_tag=YP2467%2CYP_2467 NC_005810.1 Protein Homology CDS 2739354 2739788 . + 0 ID=cds2494;Parent=gene2548;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NC_005810.1 RefSeq gene 2739878 2741596 . + . ID=gene2549;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=YP_RS12790;old_locus_tag=YP2468%2CYP_2468 NC_005810.1 Protein Homology CDS 2739878 2741596 . + 0 ID=cds2495;Parent=gene2549;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NC_005810.1 RefSeq gene 2741892 2742587 . + . ID=gene2550;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YP_RS12795;old_locus_tag=YP2469%2CYP_2469 NC_005810.1 Protein Homology CDS 2741892 2742587 . + 0 ID=cds2496;Parent=gene2550;Dbxref=Genbank:WP_002212230.1;Name=WP_002212230.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_002212230.1;transl_table=11 NC_005810.1 RefSeq gene 2742609 2743295 . + . ID=gene2551;Name=YP_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12800;old_locus_tag=YP2470%2CYP_2470 NC_005810.1 Protein Homology CDS 2742609 2743295 . + 0 ID=cds2497;Parent=gene2551;Dbxref=Genbank:WP_002212231.1;Name=WP_002212231.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_002212231.1;transl_table=11 NC_005810.1 RefSeq gene 2743422 2744084 . + . ID=gene2552;Name=YP_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12805;old_locus_tag=YP2471%2CYP_2471 NC_005810.1 Protein Homology CDS 2743422 2744084 . + 0 ID=cds2498;Parent=gene2552;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NC_005810.1 RefSeq gene 2744081 2744914 . + . ID=gene2553;Name=YP_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12810;old_locus_tag=YP2472 NC_005810.1 Protein Homology CDS 2744081 2744914 . + 0 ID=cds2499;Parent=gene2553;Dbxref=Genbank:WP_002228375.1;Name=WP_002228375.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_002228375.1;transl_table=11 NC_005810.1 RefSeq gene 2745239 2746231 . + . ID=gene2554;Name=YP_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12815;old_locus_tag=YP2473%2CYP_2473 NC_005810.1 Protein Homology CDS 2745239 2746231 . + 0 ID=cds2500;Parent=gene2554;Dbxref=Genbank:WP_002212233.1;Name=WP_002212233.1;gbkey=CDS;product=urea transporter;protein_id=WP_002212233.1;transl_table=11 NC_005810.1 RefSeq gene 2746380 2747438 . + . ID=gene2555;Name=YP_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12820;old_locus_tag=YP2474%2CYP_2474 NC_005810.1 Protein Homology CDS 2746380 2747438 . + 0 ID=cds2501;Parent=gene2555;Dbxref=Genbank:WP_002212234.1;Name=WP_002212234.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002212234.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2747569 2747606 . + . ID=id515;Note=exact repeat region containing 2 copies of a 19 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2747607 2747936 . - . ID=gene2556;Name=YP_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12825;old_locus_tag=YP2475%2CYP_2475 NC_005810.1 Protein Homology CDS 2747607 2747936 . - 0 ID=cds2502;Parent=gene2556;Dbxref=Genbank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_002212235.1;transl_table=11 NC_005810.1 RefSeq gene 2747935 2748165 . + . ID=gene2557;Name=YP_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12830 NC_005810.1 Protein Homology CDS 2747935 2748165 . + 0 ID=cds2503;Parent=gene2557;Dbxref=Genbank:WP_002215289.1;Name=WP_002215289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215289.1;transl_table=11 NC_005810.1 RefSeq gene 2748549 2749724 . + . ID=gene2558;Name=YP_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12835;old_locus_tag=YP2476%2CYP_2476 NC_005810.1 Protein Homology CDS 2748549 2749724 . + 0 ID=cds2504;Parent=gene2558;Dbxref=Genbank:WP_002212236.1;Name=WP_002212236.1;gbkey=CDS;product=voltage-gated potassium channel;protein_id=WP_002212236.1;transl_table=11 NC_005810.1 RefSeq gene 2749822 2750226 . - . ID=gene2559;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=YP_RS12840;old_locus_tag=YP2477%2CYP_2477 NC_005810.1 Protein Homology CDS 2749822 2750226 . - 0 ID=cds2505;Parent=gene2559;Dbxref=Genbank:WP_002212237.1;Name=WP_002212237.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_002212237.1;transl_table=11 NC_005810.1 RefSeq gene 2750242 2750622 . - . ID=gene2560;Name=YP_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12845;old_locus_tag=YP2478%2CYP_2478 NC_005810.1 Protein Homology CDS 2750242 2750622 . - 0 ID=cds2506;Parent=gene2560;Dbxref=Genbank:WP_002212238.1;Name=WP_002212238.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_002212238.1;transl_table=11 NC_005810.1 RefSeq gene 2750711 2750890 . - . ID=gene2561;Name=YP_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12850;old_locus_tag=YP2479%2CYP_2479 NC_005810.1 Protein Homology CDS 2750711 2750890 . - 0 ID=cds2507;Parent=gene2561;Dbxref=Genbank:WP_002212239.1;Name=WP_002212239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212239.1;transl_table=11 NC_005810.1 RefSeq gene 2751663 2751980 . + . ID=gene2562;Name=YP_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12855;old_locus_tag=YP2480%2CYP_2480 NC_005810.1 Protein Homology CDS 2751663 2751980 . + 0 ID=cds2508;Parent=gene2562;Dbxref=Genbank:WP_002212240.1;Name=WP_002212240.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_002212240.1;transl_table=11 NC_005810.1 RefSeq gene 2751991 2753352 . + . ID=gene2563;Name=YP_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12860;old_locus_tag=YP2481%2CYP_2481 NC_005810.1 Protein Homology CDS 2751991 2753352 . + 0 ID=cds2509;Parent=gene2563;Dbxref=Genbank:WP_002212241.1;Name=WP_002212241.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NC_005810.1 RefSeq gene 2753519 2753866 . + . ID=gene2564;Name=YP_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12865;old_locus_tag=YP2482%2CYP_2482 NC_005810.1 Protein Homology CDS 2753519 2753866 . + 0 ID=cds2510;Parent=gene2564;Dbxref=Genbank:WP_002212242.1;Name=WP_002212242.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIA;protein_id=WP_002212242.1;transl_table=11 NC_005810.1 RefSeq gene 2753915 2754745 . + . ID=gene2565;Name=YP_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12870;old_locus_tag=YP2483%2CYP_2483 NC_005810.1 Protein Homology CDS 2753915 2754745 . + 0 ID=cds2511;Parent=gene2565;Dbxref=Genbank:WP_016603966.1;Name=WP_016603966.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_016603966.1;transl_table=11 NC_005810.1 RefSeq gene 2754797 2755558 . + . ID=gene2566;Name=YP_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12875;old_locus_tag=YP2484%2CYP_2484 NC_005810.1 Protein Homology CDS 2754797 2755558 . + 0 ID=cds2512;Parent=gene2566;Dbxref=Genbank:WP_002212244.1;Name=WP_002212244.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11 NC_005810.1 RefSeq gene 2755565 2755741 . - . ID=gene2567;Name=YP_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12880;old_locus_tag=YP2485%2CYP_2485 NC_005810.1 Protein Homology CDS 2755565 2755741 . - 0 ID=cds2513;Parent=gene2567;Dbxref=Genbank:WP_002212245.1;Name=WP_002212245.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212245.1;transl_table=11 NC_005810.1 RefSeq gene 2755853 2756221 . - . ID=gene2568;Name=YP_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12885;old_locus_tag=YP2486%2CYP_2486 NC_005810.1 Protein Homology CDS 2755853 2756221 . - 0 ID=cds2514;Parent=gene2568;Dbxref=Genbank:WP_002212246.1;Name=WP_002212246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212246.1;transl_table=11 NC_005810.1 RefSeq gene 2756716 2757243 . + . ID=gene2569;Name=YP_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12890;old_locus_tag=YP2487%2CYP_2487 NC_005810.1 Protein Homology CDS 2756716 2757243 . + 0 ID=cds2515;Parent=gene2569;Dbxref=Genbank:WP_002212248.1;Name=WP_002212248.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_002212248.1;transl_table=11 NC_005810.1 RefSeq gene 2757316 2758959 . + . ID=gene2570;Name=YP_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12895;old_locus_tag=YP2488%2CYP_2488 NC_005810.1 Protein Homology CDS 2757316 2758959 . + 0 ID=cds2516;Parent=gene2570;Dbxref=Genbank:WP_002216360.1;Name=WP_002216360.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_002216360.1;transl_table=11 NC_005810.1 RefSeq gene 2759177 2759290 . + . ID=gene2571;Name=YP_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12900 NC_005810.1 Protein Homology CDS 2759177 2759290 . + 0 ID=cds2517;Parent=gene2571;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11 NC_005810.1 RefSeq gene 2759333 2759575 . + . ID=gene2572;Name=YP_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12905;old_locus_tag=YP2489%2CYP_2489 NC_005810.1 Protein Homology CDS 2759333 2759575 . + 0 ID=cds2518;Parent=gene2572;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NC_005810.1 RefSeq gene 2759703 2760131 . - . ID=gene2573;Name=YP_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12910;old_locus_tag=YP2490%2CYP_2490 NC_005810.1 Protein Homology CDS 2759703 2760131 . - 0 ID=cds2519;Parent=gene2573;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11 NC_005810.1 RefSeq gene 2760226 2760912 . - . ID=gene2574;Name=YP_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12915;old_locus_tag=YP2491%2CYP_2491 NC_005810.1 Protein Homology CDS 2760226 2760912 . - 0 ID=cds2520;Parent=gene2574;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11 NC_005810.1 RefSeq gene 2761148 2763874 . - . ID=gene2575;Name=YP_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12920;old_locus_tag=YP2492%2CYP_2492 NC_005810.1 Protein Homology CDS 2761148 2763874 . - 0 ID=cds2521;Parent=gene2575;Dbxref=Genbank:WP_002209649.1;Name=WP_002209649.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_002209649.1;transl_table=11 NC_005810.1 RefSeq gene 2763884 2764534 . - . ID=gene2576;Name=YP_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12925;old_locus_tag=YP2493%2CYP_2493 NC_005810.1 Protein Homology CDS 2763884 2764534 . - 0 ID=cds2522;Parent=gene2576;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11 NC_005810.1 RefSeq gene 2764698 2766764 . - . ID=gene2577;Name=YP_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12930;old_locus_tag=YP2494%2CYP_2494 NC_005810.1 Protein Homology CDS 2764698 2766764 . - 0 ID=cds2523;Parent=gene2577;Dbxref=Genbank:WP_002209651.1;Name=WP_002209651.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_002209651.1;transl_table=11 NC_005810.1 RefSeq gene 2766858 2768546 . - . ID=gene2578;Name=YP_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12935;old_locus_tag=YP2495%2CYP_2495 NC_005810.1 Protein Homology CDS 2766858 2768546 . - 0 ID=cds2524;Parent=gene2578;Dbxref=Genbank:WP_002209652.1;Name=WP_002209652.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_002209652.1;transl_table=11 NC_005810.1 RefSeq gene 2768547 2768636 . - . ID=gene2579;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=YP_RS12940 NC_005810.1 Protein Homology CDS 2768547 2768636 . - 0 ID=cds2525;Parent=gene2579;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11 NC_005810.1 RefSeq gene 2768633 2768875 . - . ID=gene2580;Name=YP_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12945 NC_005810.1 Protein Homology CDS 2768633 2768875 . - 0 ID=cds2526;Parent=gene2580;Dbxref=Genbank:WP_002216017.1;Name=WP_002216017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216017.1;transl_table=11 NC_005810.1 RefSeq gene 2769041 2769247 . + . ID=gene2581;Name=YP_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12950;old_locus_tag=YP2496 NC_005810.1 Protein Homology CDS 2769041 2769247 . + 0 ID=cds2527;Parent=gene2581;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11 NC_005810.1 RefSeq gene 2769586 2770068 . + . ID=gene2582;Name=YP_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12955;old_locus_tag=YP2498%2CYP_2498 NC_005810.1 Protein Homology CDS 2769586 2770068 . + 0 ID=cds2528;Parent=gene2582;Dbxref=Genbank:WP_002209654.1;Name=WP_002209654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209654.1;transl_table=11 NC_005810.1 RefSeq gene 2770198 2771661 . + . ID=gene2583;Name=YP_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12960;old_locus_tag=YP2499%2CYP_2499 NC_005810.1 Protein Homology CDS 2770198 2771661 . + 0 ID=cds2529;Parent=gene2583;Dbxref=Genbank:WP_002209655.1;Name=WP_002209655.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_002209655.1;transl_table=11 NC_005810.1 RefSeq gene 2771652 2772689 . + . ID=gene2584;Name=YP_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12965;old_locus_tag=YP2500%2CYP_2500 NC_005810.1 Protein Homology CDS 2771652 2772689 . + 0 ID=cds2530;Parent=gene2584;Dbxref=Genbank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002209656.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2772719 2772769 . + . ID=id516;Note=degenerate repeat region containing 3 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2772832 2773575 . + . ID=gene2585;Name=YP_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12970;old_locus_tag=YP2501%2CYP_2501 NC_005810.1 Protein Homology CDS 2772832 2773575 . + 0 ID=cds2531;Parent=gene2585;Dbxref=Genbank:WP_025471060.1;Name=WP_025471060.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_025471060.1;transl_table=11 NC_005810.1 RefSeq gene 2774194 2774850 . + . ID=gene2586;Name=YP_RS12975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS12975;old_locus_tag=YP2502;pseudo=true NC_005810.1 Protein Homology CDS 2774194 2774850 . + 0 ID=cds2532;Parent=gene2586;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2774737..2774739%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 2774844 2775794 . + . ID=gene2587;Name=YP_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12980;old_locus_tag=YP2503%2CYP_2503 NC_005810.1 Protein Homology CDS 2774844 2775794 . + 0 ID=cds2533;Parent=gene2587;Dbxref=Genbank:WP_002209658.1;Name=WP_002209658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209658.1;transl_table=11 NC_005810.1 RefSeq gene 2775791 2776528 . + . ID=gene2588;Name=YP_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12985;old_locus_tag=YP2504%2CYP_2504 NC_005810.1 Protein Homology CDS 2775791 2776528 . + 0 ID=cds2534;Parent=gene2588;Dbxref=Genbank:WP_002209659.1;Name=WP_002209659.1;gbkey=CDS;product=LamB/YcsF family protein;protein_id=WP_002209659.1;transl_table=11 NC_005810.1 RefSeq gene 2776613 2777344 . + . ID=gene2589;Name=YP_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12990;old_locus_tag=YP2505%2CYP_2505 NC_005810.1 Protein Homology CDS 2776613 2777344 . + 0 ID=cds2535;Parent=gene2589;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11 NC_005810.1 RefSeq gene 2777341 2778360 . + . ID=gene2590;Name=YP_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS12995;old_locus_tag=YP2506%2CYP_2506 NC_005810.1 Protein Homology CDS 2777341 2778360 . + 0 ID=cds2536;Parent=gene2590;Dbxref=Genbank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209661.1;transl_table=11 NC_005810.1 RefSeq gene 2778370 2779017 . + . ID=gene2591;Name=YP_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13000;old_locus_tag=YP2507%2CYP_2507 NC_005810.1 Protein Homology CDS 2778370 2779017 . + 0 ID=cds2537;Parent=gene2591;Dbxref=Genbank:WP_002209662.1;Name=WP_002209662.1;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=WP_002209662.1;transl_table=11 NC_005810.1 RefSeq gene 2779108 2779794 . - . ID=gene2592;Name=YP_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13005;old_locus_tag=YP2508%2CYP_2508 NC_005810.1 Protein Homology CDS 2779108 2779794 . - 0 ID=cds2538;Parent=gene2592;Dbxref=Genbank:WP_002209663.1;Name=WP_002209663.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_002209663.1;transl_table=11 NC_005810.1 RefSeq gene 2780147 2780530 . + . ID=gene2593;Name=YP_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13010;old_locus_tag=YP2509%2CYP_2509 NC_005810.1 Protein Homology CDS 2780147 2780530 . + 0 ID=cds2539;Parent=gene2593;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NC_005810.1 RefSeq gene 2780709 2781671 . + . ID=gene2594;Name=YP_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13015;old_locus_tag=YP2510%2CYP_2510 NC_005810.1 Protein Homology CDS 2780709 2781671 . + 0 ID=cds2540;Parent=gene2594;Dbxref=Genbank:WP_002209665.1;Name=WP_002209665.1;gbkey=CDS;product=phospholipase A;protein_id=WP_002209665.1;transl_table=11 NC_005810.1 RefSeq gene 2781664 2781762 . + . ID=gene2595;Name=YP_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13020 NC_005810.1 Protein Homology CDS 2781664 2781762 . + 0 ID=cds2541;Parent=gene2595;Dbxref=Genbank:WP_002228379.1;Name=WP_002228379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228379.1;transl_table=11 NC_005810.1 RefSeq gene 2781749 2782405 . + . ID=gene2596;Name=YP_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13025;old_locus_tag=YP2511%2CYP_2511 NC_005810.1 Protein Homology CDS 2781749 2782405 . + 0 ID=cds2542;Parent=gene2596;Dbxref=Genbank:WP_002209667.1;Name=WP_002209667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209667.1;transl_table=11 NC_005810.1 RefSeq gene 2782536 2783861 . - . ID=gene2597;Name=YP_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13030;old_locus_tag=YP2512%2CYP_2512 NC_005810.1 Protein Homology CDS 2782536 2783861 . - 0 ID=cds2543;Parent=gene2597;Dbxref=Genbank:WP_002209669.1;Name=WP_002209669.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002209669.1;transl_table=11 NC_005810.1 RefSeq gene 2784113 2784859 . + . ID=gene2598;Name=YP_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13035;old_locus_tag=YP2513%2CYP_2513 NC_005810.1 Protein Homology CDS 2784113 2784859 . + 0 ID=cds2544;Parent=gene2598;Dbxref=Genbank:WP_002209670.1;Name=WP_002209670.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002209670.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2784855 2784892 . + . ID=id517;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2784927 2785103 . + . ID=id518;gbkey=repeat_region NC_005810.1 RefSeq gene 2785142 2786779 . - . ID=gene2599;Name=YP_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13040;old_locus_tag=YP2514%2CYP_2514 NC_005810.1 Protein Homology CDS 2785142 2786779 . - 0 ID=cds2545;Parent=gene2599;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11 NC_005810.1 RefSeq gene 2786967 2787542 . + . ID=gene2600;Name=YP_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13045;old_locus_tag=YP2515%2CYP_2515 NC_005810.1 Protein Homology CDS 2786967 2787542 . + 0 ID=cds2546;Parent=gene2600;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11 NC_005810.1 RefSeq gene 2787568 2788224 . + . ID=gene2601;Name=YP_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13050;old_locus_tag=YP2516%2CYP_2516 NC_005810.1 Protein Homology CDS 2787568 2788224 . + 0 ID=cds2547;Parent=gene2601;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11 NC_005810.1 RefSeq gene 2788224 2789180 . + . ID=gene2602;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YP_RS13055;old_locus_tag=YP2517%2CYP_2517 NC_005810.1 Protein Homology CDS 2788224 2789180 . + 0 ID=cds2548;Parent=gene2602;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11 NC_005810.1 RefSeq gene 2789177 2789632 . + . ID=gene2603;Name=YP_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13060;old_locus_tag=YP2518%2CYP_2518 NC_005810.1 Protein Homology CDS 2789177 2789632 . + 0 ID=cds2549;Parent=gene2603;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NC_005810.1 RefSeq gene 2789653 2790507 . - . ID=gene2604;Name=YP_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13065;old_locus_tag=YP2519%2CYP_2519 NC_005810.1 Protein Homology CDS 2789653 2790507 . - 0 ID=cds2550;Parent=gene2604;Dbxref=Genbank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209676.1;transl_table=11 NC_005810.1 RefSeq gene 2791007 2792806 . + . ID=gene2605;Name=YP_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13070;old_locus_tag=YP2520%2CYP_2520 NC_005810.1 Protein Homology CDS 2791007 2792806 . + 0 ID=cds2551;Parent=gene2605;Dbxref=Genbank:WP_002209677.1;Name=WP_002209677.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NC_005810.1 RefSeq gene 2792816 2793814 . + . ID=gene2606;Name=YP_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13075;old_locus_tag=YP2521%2CYP_2521 NC_005810.1 Protein Homology CDS 2792816 2793814 . + 0 ID=cds2552;Parent=gene2606;Dbxref=Genbank:WP_002209678.1;Name=WP_002209678.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11 NC_005810.1 RefSeq gene 2794166 2794846 . + . ID=gene2607;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YP_RS13080;old_locus_tag=YP2522%2CYP_2522 NC_005810.1 Protein Homology CDS 2794166 2794846 . + 0 ID=cds2553;Parent=gene2607;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11 NC_005810.1 RefSeq gene 2794843 2795754 . + . ID=gene2608;Name=YP_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13085;old_locus_tag=YP2523%2CYP_2523 NC_005810.1 Protein Homology CDS 2794843 2795754 . + 0 ID=cds2554;Parent=gene2608;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NC_005810.1 RefSeq gene 2795764 2796489 . + . ID=gene2609;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YP_RS13090;old_locus_tag=YP2524%2CYP_2524 NC_005810.1 Protein Homology CDS 2795764 2796489 . + 0 ID=cds2555;Parent=gene2609;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NC_005810.1 RefSeq gene 2796648 2797379 . + . ID=gene2610;Name=YP_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13095;old_locus_tag=YP2525%2CYP_2525 NC_005810.1 Protein Homology CDS 2796648 2797379 . + 0 ID=cds2556;Parent=gene2610;Dbxref=Genbank:WP_002211569.1;Name=WP_002211569.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_002211569.1;transl_table=11 NC_005810.1 RefSeq gene 2797379 2797759 . + . ID=gene2611;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YP_RS13100;old_locus_tag=YP2526%2CYP_2526 NC_005810.1 Protein Homology CDS 2797379 2797759 . + 0 ID=cds2557;Parent=gene2611;Dbxref=Genbank:WP_002211568.1;Name=WP_002211568.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_002211568.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2797812 2798529 . + . ID=id519;gbkey=repeat_region NC_005810.1 RefSeq region 2797816 2798527 . + . ID=id520;gbkey=mobile_element NC_005810.1 RefSeq gene 2797816 2797971 . + . ID=gene2612;Name=YP_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13105 NC_005810.1 Protein Homology CDS 2797816 2797971 . + 0 ID=cds2558;Parent=gene2612;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_005810.1 RefSeq gene 2797961 2798419 . + . ID=gene2613;Name=YP_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13110;old_locus_tag=YP2527%2CYP_2527 NC_005810.1 Protein Homology CDS 2797961 2798419 . + 0 ID=cds2559;Parent=gene2613;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 2798575 2798835 . - . ID=gene2614;Name=YP_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13115;old_locus_tag=YP2528%2CYP_2528 NC_005810.1 Protein Homology CDS 2798575 2798835 . - 0 ID=cds2560;Parent=gene2614;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11 NC_005810.1 RefSeq gene 2798997 2799440 . - . ID=gene2615;Name=YP_RS13120;end_range=2799440,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS13120;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 2798997 2799440 . - 0 ID=cds2561;Parent=gene2615;end_range=2799440,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 2799432 2801391 . + . ID=id521;gbkey=repeat_region NC_005810.1 RefSeq region 2799435 2801387 . - . ID=id522;gbkey=mobile_element NC_005810.1 RefSeq gene 2799521 2800543 . + . ID=gene2616;Name=YP_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13125;old_locus_tag=YP2530%2CYP_2530 NC_005810.1 Protein Homology CDS 2799521 2800543 . + 0 ID=cds2562;Parent=gene2616;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 2800543 2801322 . + . ID=gene2617;Name=YP_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13130;old_locus_tag=YP2531%2CYP_2531 NC_005810.1 Protein Homology CDS 2800543 2801322 . + 0 ID=cds2563;Parent=gene2617;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 2801385 2801795 . - . ID=gene2618;Name=YP_RS13135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS13135;partial=true;pseudo=true;start_range=.,2801385 NC_005810.1 Protein Homology CDS 2801385 2801795 . - 0 ID=cds2564;Parent=gene2618;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,2801385;transl_table=11 NC_005810.1 RefSeq gene 2802003 2802890 . + . ID=gene2619;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=YP_RS13140;old_locus_tag=YP2532%2CYP_2532 NC_005810.1 Protein Homology CDS 2802003 2802890 . + 0 ID=cds2565;Parent=gene2619;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NC_005810.1 RefSeq gene 2803117 2803812 . + . ID=gene2620;Name=YP_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13145;old_locus_tag=YP2533%2CYP_2533 NC_005810.1 Protein Homology CDS 2803117 2803812 . + 0 ID=cds2566;Parent=gene2620;Dbxref=Genbank:WP_002211564.1;Name=WP_002211564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211564.1;transl_table=11 NC_005810.1 RefSeq gene 2803883 2804485 . + . ID=gene2621;Name=YP_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13150;old_locus_tag=YP2534%2CYP_2534 NC_005810.1 Protein Homology CDS 2803883 2804485 . + 0 ID=cds2567;Parent=gene2621;Dbxref=Genbank:WP_002211563.1;Name=WP_002211563.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_002211563.1;transl_table=11 NC_005810.1 RefSeq gene 2804594 2806054 . - . ID=gene2622;Name=YP_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13155;old_locus_tag=YP2535%2CYP_2535 NC_005810.1 Protein Homology CDS 2804594 2806054 . - 0 ID=cds2568;Parent=gene2622;Dbxref=Genbank:WP_002211562.1;Name=WP_002211562.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002211562.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2806298 2806329 . + . ID=id523;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2806370 2810260 . + . ID=gene2623;Name=YP_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13160;old_locus_tag=YP2536%2CYP_2536 NC_005810.1 Protein Homology CDS 2806370 2810260 . + 0 ID=cds2569;Parent=gene2623;Dbxref=Genbank:WP_002223376.1;Name=WP_002223376.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_002223376.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2810291 2810465 . + . ID=id524;gbkey=repeat_region NC_005810.1 RefSeq gene 2810672 2811121 . - . ID=gene2624;Name=YP_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13165;old_locus_tag=YP2537 NC_005810.1 Protein Homology CDS 2810672 2811121 . - 0 ID=cds2570;Parent=gene2624;Dbxref=Genbank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11 NC_005810.1 RefSeq gene 2811573 2812133 . - . ID=gene2625;Name=YP_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13170;old_locus_tag=YP2538%2CYP_2538 NC_005810.1 Protein Homology CDS 2811573 2812133 . - 0 ID=cds2571;Parent=gene2625;Dbxref=Genbank:WP_002211559.1;Name=WP_002211559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211559.1;transl_table=11 NC_005810.1 RefSeq gene 2813152 2813370 . + . ID=gene2626;Name=YP_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13175;old_locus_tag=YP2539 NC_005810.1 Protein Homology CDS 2813152 2813370 . + 0 ID=cds2572;Parent=gene2626;Dbxref=Genbank:WP_042468836.1;Name=WP_042468836.1;gbkey=CDS;product=transposase;protein_id=WP_042468836.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2813210 2813929 . + . ID=id525;gbkey=repeat_region NC_005810.1 RefSeq region 2813215 2813926 . + . ID=id526;gbkey=mobile_element NC_005810.1 RefSeq gene 2813360 2813818 . + . ID=gene2627;Name=YP_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13180;old_locus_tag=YP2540%2CYP_2540 NC_005810.1 Protein Homology CDS 2813360 2813818 . + 0 ID=cds2573;Parent=gene2627;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 2814039 2815475 . + . ID=gene2628;Name=YP_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13185;old_locus_tag=YP2541%2CYP_2541 NC_005810.1 Protein Homology CDS 2814039 2815475 . + 0 ID=cds2574;Parent=gene2628;Dbxref=Genbank:WP_002216114.1;Name=WP_002216114.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11 NC_005810.1 RefSeq gene 2815479 2816546 . + . ID=gene2629;Name=YP_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13190;old_locus_tag=YP2542%2CYP_2542 NC_005810.1 Protein Homology CDS 2815479 2816546 . + 0 ID=cds2575;Parent=gene2629;Dbxref=Genbank:WP_002430124.1;Name=WP_002430124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002430124.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2816289 2816333 . + . ID=id527;Note=degenerate repeat region containing 3 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2816509 2817846 . + . ID=gene2630;Name=YP_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13195;old_locus_tag=YP2543%2CYP_2543 NC_005810.1 Protein Homology CDS 2816509 2817846 . + 0 ID=cds2576;Parent=gene2630;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11 NC_005810.1 RefSeq gene 2818006 2819628 . + . ID=gene2631;Name=YP_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13200;old_locus_tag=YP2544%2CYP_2544 NC_005810.1 Protein Homology CDS 2818006 2819628 . + 0 ID=cds2577;Parent=gene2631;Dbxref=Genbank:WP_002211555.1;Name=WP_002211555.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_002211555.1;transl_table=11 NC_005810.1 RefSeq gene 2819643 2819981 . + . ID=gene2632;Name=YP_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13205;old_locus_tag=YP2545%2CYP_2545 NC_005810.1 Protein Homology CDS 2819643 2819981 . + 0 ID=cds2578;Parent=gene2632;Dbxref=Genbank:WP_002231018.1;Name=WP_002231018.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002231018.1;transl_table=11 NC_005810.1 RefSeq gene 2820150 2820521 . - . ID=gene2633;Name=YP_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13210 NC_005810.1 Protein Homology CDS 2820150 2820521 . - 0 ID=cds2579;Parent=gene2633;Dbxref=Genbank:WP_002216118.1;Name=WP_002216118.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216118.1;transl_table=11 NC_005810.1 RefSeq gene 2820487 2821050 . - . ID=gene2634;Name=YP_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13215 NC_005810.1 Protein Homology CDS 2820487 2821050 . - 0 ID=cds2580;Parent=gene2634;Dbxref=Genbank:WP_002216119.1;Name=WP_002216119.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002216119.1;transl_table=11 NC_005810.1 RefSeq gene 2821514 2822704 . - . ID=gene2635;Name=YP_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13220;old_locus_tag=YP2547%2CYP_2547 NC_005810.1 Protein Homology CDS 2821514 2822704 . - 0 ID=cds2581;Parent=gene2635;Dbxref=Genbank:WP_002211553.1;Name=WP_002211553.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=flavohemoprotein;protein_id=WP_002211553.1;transl_table=11 NC_005810.1 RefSeq gene 2823245 2824498 . + . ID=gene2636;Name=YP_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13225;old_locus_tag=YP2548%2CYP_2548 NC_005810.1 Protein Homology CDS 2823245 2824498 . + 0 ID=cds2582;Parent=gene2636;Dbxref=Genbank:WP_002211552.1;Name=WP_002211552.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NC_005810.1 RefSeq gene 2824650 2824832 . + . ID=gene2637;Name=YP_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13230;old_locus_tag=YP2549%2CYP_2549 NC_005810.1 Protein Homology CDS 2824650 2824832 . + 0 ID=cds2583;Parent=gene2637;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11 NC_005810.1 RefSeq gene 2824951 2825490 . + . ID=gene2638;Name=YP_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13235;old_locus_tag=YP2550%2CYP_2550 NC_005810.1 Protein Homology CDS 2824951 2825490 . + 0 ID=cds2584;Parent=gene2638;Dbxref=Genbank:WP_016604006.1;Name=WP_016604006.1;gbkey=CDS;product=attachment protein;protein_id=WP_016604006.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2825628 2825663 . + . ID=id528;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2825842 2826999 . + . ID=gene2639;Name=YP_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13240;old_locus_tag=YP2551%2CYP_2551 NC_005810.1 Protein Homology CDS 2825842 2826999 . + 0 ID=cds2585;Parent=gene2639;Dbxref=Genbank:WP_002213316.1;Name=WP_002213316.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=WP_002213316.1;transl_table=11 NC_005810.1 RefSeq gene 2826996 2828357 . - . ID=gene2640;Name=YP_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13245;old_locus_tag=YP2552%2CYP_2552 NC_005810.1 Protein Homology CDS 2826996 2828357 . - 0 ID=cds2586;Parent=gene2640;Dbxref=Genbank:WP_002213314.1;Name=WP_002213314.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_002213314.1;transl_table=11 NC_005810.1 RefSeq gene 2828499 2829173 . + . ID=gene2641;Name=YP_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13250;old_locus_tag=YP2553%2CYP_2553 NC_005810.1 Protein Homology CDS 2828499 2829173 . + 0 ID=cds2587;Parent=gene2641;Dbxref=Genbank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213310.1;transl_table=11 NC_005810.1 RefSeq gene 2829164 2830186 . + . ID=gene2642;Name=YP_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13255;old_locus_tag=YP2554%2CYP_2554 NC_005810.1 Protein Homology CDS 2829164 2830186 . + 0 ID=cds2588;Parent=gene2642;Dbxref=Genbank:WP_011171892.1;Name=WP_011171892.1;gbkey=CDS;product=nickel transporter;protein_id=WP_011171892.1;transl_table=11 NC_005810.1 RefSeq gene 2830285 2831088 . - . ID=gene2643;Name=YP_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13260;old_locus_tag=YP2555%2CYP_2555 NC_005810.1 Protein Homology CDS 2830285 2831088 . - 0 ID=cds2589;Parent=gene2643;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11 NC_005810.1 RefSeq gene 2831207 2831980 . + . ID=gene2644;Name=YP_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13265;old_locus_tag=YP2556%2CYP_2556 NC_005810.1 Protein Homology CDS 2831207 2831980 . + 0 ID=cds2590;Parent=gene2644;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NC_005810.1 RefSeq gene 2832136 2832630 . + . ID=gene2645;Name=YP_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13270;old_locus_tag=YP2557%2CYP_2557 NC_005810.1 Protein Homology CDS 2832136 2832630 . + 0 ID=cds2591;Parent=gene2645;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NC_005810.1 RefSeq gene 2832684 2833913 . + . ID=gene2646;Name=YP_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13275;old_locus_tag=YP2558%2CYP_2558 NC_005810.1 Protein Homology CDS 2832684 2833913 . + 0 ID=cds2592;Parent=gene2646;Dbxref=Genbank:WP_002209836.1;Name=WP_002209836.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002209836.1;transl_table=11 NC_005810.1 RefSeq gene 2833944 2834330 . + . ID=gene2647;Name=YP_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13280;old_locus_tag=YP2559%2CYP_2559 NC_005810.1 Protein Homology CDS 2833944 2834330 . + 0 ID=cds2593;Parent=gene2647;Dbxref=Genbank:WP_002209835.1;Name=WP_002209835.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NC_005810.1 RefSeq gene 2834600 2834923 . + . ID=gene2648;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YP_RS13285;old_locus_tag=YP2560%2CYP_2560 NC_005810.1 Protein Homology CDS 2834600 2834923 . + 0 ID=cds2594;Parent=gene2648;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11 NC_005810.1 RefSeq gene 2835034 2835558 . + . ID=gene2649;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YP_RS13290;old_locus_tag=YP2562%2CYP_2562 NC_005810.1 Protein Homology CDS 2835034 2835558 . + 0 ID=cds2595;Parent=gene2649;Dbxref=Genbank:WP_002209833.1;Name=WP_002209833.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_002209833.1;transl_table=11 NC_005810.1 RefSeq gene 2835801 2837738 . + . ID=gene2650;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YP_RS13295;old_locus_tag=YP2563%2CYP_2563 NC_005810.1 Protein Homology CDS 2835801 2837738 . + 0 ID=cds2596;Parent=gene2650;Dbxref=Genbank:WP_011171893.1;Name=WP_011171893.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_011171893.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2835936 2836007 . + . ID=id529;Note=degenerate repeat region containing 4 copies of a 18bp unit;gbkey=repeat_region;gene=hscA NC_005810.1 RefSeq gene 2837741 2838076 . + . ID=gene2651;Name=YP_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13300;old_locus_tag=YP2564%2CYP_2564 NC_005810.1 Protein Homology CDS 2837741 2838076 . + 0 ID=cds2597;Parent=gene2651;Dbxref=Genbank:WP_002209831.1;Name=WP_002209831.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002209831.1;transl_table=11 NC_005810.1 RefSeq gene 2838106 2838306 . + . ID=gene2652;Name=YP_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13305;old_locus_tag=YP2565%2CYP_2565 NC_005810.1 Protein Homology CDS 2838106 2838306 . + 0 ID=cds2598;Parent=gene2652;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11 NC_005810.1 RefSeq gene 2838446 2839744 . + . ID=gene2653;Name=YP_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13310;old_locus_tag=YP2566%2CYP_2566 NC_005810.1 Protein Homology CDS 2838446 2839744 . + 0 ID=cds2599;Parent=gene2653;Dbxref=Genbank:WP_002209829.1;Name=WP_002209829.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_002209829.1;transl_table=11 NC_005810.1 RefSeq gene 2839823 2840776 . + . ID=gene2654;Name=YP_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13315;old_locus_tag=YP2567%2CYP_2567 NC_005810.1 Protein Homology CDS 2839823 2840776 . + 0 ID=cds2600;Parent=gene2654;Dbxref=Genbank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_002209828.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2840812 2840982 . + . ID=id530;gbkey=repeat_region NC_005810.1 RefSeq gene 2841114 2841434 . - . ID=gene2655;Name=YP_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13320 NC_005810.1 Protein Homology CDS 2841114 2841434 . - 0 ID=cds2601;Parent=gene2655;Dbxref=Genbank:WP_002215505.1;Name=WP_002215505.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215505.1;transl_table=11 NC_005810.1 RefSeq gene 2841400 2843880 . - . ID=gene2656;Name=YP_RS13325;end_range=2843880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS13325;old_locus_tag=YP2568;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 2841400 2843880 . - 0 ID=cds2602;Parent=gene2656;end_range=2843880,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=pertactin;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 2842628 2842777 . + . ID=id531;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2842790 2842939 . + . ID=id532;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2843873 2845193 . + . ID=id533;gbkey=repeat_region NC_005810.1 RefSeq region 2843875 2845189 . + . ID=id534;gbkey=mobile_element NC_005810.1 RefSeq gene 2843946 2845154 . + . ID=gene2657;Name=YP_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13330;old_locus_tag=YP2569%2CYP_2569 NC_005810.1 Protein Homology CDS 2843946 2845154 . + 0 ID=cds2603;Parent=gene2657;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 2845176 2846726 . - . ID=gene2658;Name=YP_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13335;old_locus_tag=YP2570 NC_005810.1 Protein Homology CDS 2845176 2846726 . - 0 ID=cds2604;Parent=gene2658;Dbxref=Genbank:WP_002231031.1;Name=WP_002231031.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002231031.1;transl_table=11 NC_005810.1 RefSeq gene 2846854 2847615 . - . ID=gene2659;Name=YP_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13340;old_locus_tag=YP2571%2CYP_2571 NC_005810.1 Protein Homology CDS 2846854 2847615 . - 0 ID=cds2605;Parent=gene2659;Dbxref=Genbank:WP_002211579.1;Name=WP_002211579.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211579.1;transl_table=11 NC_005810.1 RefSeq gene 2847772 2848317 . - . ID=gene2660;Name=YP_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13345;old_locus_tag=YP2572%2CYP_2572 NC_005810.1 Protein Homology CDS 2847772 2848317 . - 0 ID=cds2606;Parent=gene2660;Dbxref=Genbank:WP_002211580.1;Name=WP_002211580.1;gbkey=CDS;product=frimbrial protein;protein_id=WP_002211580.1;transl_table=11 NC_005810.1 RefSeq gene 2848518 2851193 . - . ID=gene2661;Name=YP_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13350;old_locus_tag=YP2573%2CYP_2573 NC_005810.1 Protein Homology CDS 2848518 2851193 . - 0 ID=cds2607;Parent=gene2661;Dbxref=Genbank:WP_002215317.1;Name=WP_002215317.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_002215317.1;transl_table=11 NC_005810.1 RefSeq gene 2851976 2853856 . + . ID=gene2662;Name=YP_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13355;old_locus_tag=YP2574%2CYP_2574 NC_005810.1 Protein Homology CDS 2851976 2853856 . + 0 ID=cds2608;Parent=gene2662;Dbxref=Genbank:WP_002211582.1;Name=WP_002211582.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211582.1;transl_table=11 NC_005810.1 RefSeq gene 2853856 2854881 . + . ID=gene2663;Name=YP_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13360;old_locus_tag=YP2575%2CYP_2575 NC_005810.1 Protein Homology CDS 2853856 2854881 . + 0 ID=cds2609;Parent=gene2663;Dbxref=Genbank:WP_002211583.1;Name=WP_002211583.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211583.1;transl_table=11 NC_005810.1 RefSeq gene 2854980 2856161 . + . ID=gene2664;Name=YP_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13365;old_locus_tag=YP2576%2CYP_2576 NC_005810.1 Protein Homology CDS 2854980 2856161 . + 0 ID=cds2610;Parent=gene2664;Dbxref=Genbank:WP_002211584.1;Name=WP_002211584.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211584.1;transl_table=11 NC_005810.1 RefSeq gene 2856168 2857199 . + . ID=gene2665;Name=YP_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13370;old_locus_tag=YP2577%2CYP_2577 NC_005810.1 Protein Homology CDS 2856168 2857199 . + 0 ID=cds2611;Parent=gene2665;Dbxref=Genbank:WP_002215319.1;Name=WP_002215319.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215319.1;transl_table=11 NC_005810.1 RefSeq gene 2857239 2858577 . + . ID=gene2666;Name=YP_RS13375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS13375;old_locus_tag=YP2578;pseudo=true NC_005810.1 Protein Homology CDS 2857239 2858577 . + 0 ID=cds2612;Parent=gene2666;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyltransferase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2858574 2859275 . + . ID=gene2667;Name=YP_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13380;old_locus_tag=YP2579%2CYP_2579 NC_005810.1 Protein Homology CDS 2858574 2859275 . + 0 ID=cds2613;Parent=gene2667;Dbxref=Genbank:WP_002224806.1;Name=WP_002224806.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224806.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2859112 2859165 . + . ID=id535;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2859276 2860958 . + . ID=gene2668;Name=YP_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13385;old_locus_tag=YP2580%2CYP_2580 NC_005810.1 Protein Homology CDS 2859276 2860958 . + 0 ID=cds2614;Parent=gene2668;Dbxref=Genbank:WP_002211588.1;Name=WP_002211588.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211588.1;transl_table=11 NC_005810.1 RefSeq gene 2860955 2861437 . + . ID=gene2669;Name=YP_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13390;old_locus_tag=YP2581%2CYP_2581 NC_005810.1 Protein Homology CDS 2860955 2861437 . + 0 ID=cds2615;Parent=gene2669;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11 NC_005810.1 RefSeq gene 2861795 2862397 . - . ID=gene2670;Name=YP_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13395;old_locus_tag=YP2582%2CYP_2582 NC_005810.1 Protein Homology CDS 2861795 2862397 . - 0 ID=cds2616;Parent=gene2670;Dbxref=Genbank:WP_002211590.1;Name=WP_002211590.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211590.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2862572 2862613 . + . ID=id536;Note=degenerate repeat region containing 6 copies of a 7bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2863673 2864767 . - . ID=gene2671;Name=YP_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13400;old_locus_tag=YP2583%2CYP_2583 NC_005810.1 Protein Homology CDS 2863673 2864767 . - 0 ID=cds2617;Parent=gene2671;Dbxref=Genbank:WP_002211594.1;Name=WP_002211594.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_002211594.1;transl_table=11 NC_005810.1 RefSeq gene 2865096 2866115 . + . ID=gene2672;Name=YP_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13405;old_locus_tag=YP2584%2CYP_2584 NC_005810.1 Protein Homology CDS 2865096 2866115 . + 0 ID=cds2618;Parent=gene2672;Dbxref=Genbank:WP_002211596.1;Name=WP_002211596.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211596.1;transl_table=11 NC_005810.1 RefSeq gene 2866171 2867757 . + . ID=gene2673;Name=YP_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13410;old_locus_tag=YP2585%2CYP_2585 NC_005810.1 Protein Homology CDS 2866171 2867757 . + 0 ID=cds2619;Parent=gene2673;Dbxref=Genbank:WP_002215840.1;Name=WP_002215840.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002215840.1;transl_table=11 NC_005810.1 RefSeq gene 2867754 2868803 . + . ID=gene2674;Name=YP_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13415;old_locus_tag=YP2586%2CYP_2586 NC_005810.1 Protein Homology CDS 2867754 2868803 . + 0 ID=cds2620;Parent=gene2674;Dbxref=Genbank:WP_002211598.1;Name=WP_002211598.1;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_002211598.1;transl_table=11 NC_005810.1 RefSeq gene 2868876 2869400 . - . ID=gene2675;Name=YP_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13420;old_locus_tag=YP2587%2CYP_2587 NC_005810.1 Protein Homology CDS 2868876 2869400 . - 0 ID=cds2621;Parent=gene2675;Dbxref=Genbank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211599.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2869429 2869460 . + . ID=id537;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2869867 2870346 . + . ID=gene2676;Name=YP_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13425;old_locus_tag=YP2588%2CYP_2588 NC_005810.1 Protein Homology CDS 2869867 2870346 . + 0 ID=cds2622;Parent=gene2676;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11 NC_005810.1 RefSeq gene 2870576 2871424 . - . ID=gene2677;Name=YP_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13430;old_locus_tag=YP2589%2CYP_2589 NC_005810.1 Protein Homology CDS 2870576 2871424 . - 0 ID=cds2623;Parent=gene2677;Dbxref=Genbank:WP_002211601.1;Name=WP_002211601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211601.1;transl_table=11 NC_005810.1 RefSeq gene 2872255 2874681 . + . ID=gene2678;Name=YP_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13435;old_locus_tag=YP2590%2CYP_2590 NC_005810.1 Protein Homology CDS 2872255 2874681 . + 0 ID=cds2624;Parent=gene2678;Dbxref=Genbank:WP_002211602.1;Name=WP_002211602.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002211602.1;transl_table=11 NC_005810.1 RefSeq gene 2874693 2875310 . + . ID=gene2679;Name=YP_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13440;old_locus_tag=YP2591%2CYP_2591 NC_005810.1 Protein Homology CDS 2874693 2875310 . + 0 ID=cds2625;Parent=gene2679;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11 NC_005810.1 RefSeq gene 2875312 2876088 . + . ID=gene2680;Name=YP_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13445;old_locus_tag=YP2592%2CYP_2592 NC_005810.1 Protein Homology CDS 2875312 2876088 . + 0 ID=cds2626;Parent=gene2680;Dbxref=Genbank:WP_002211604.1;Name=WP_002211604.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211604.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2876180 2876427 . + . ID=id538;Note=degenerate repeat region containing 2 copies of a 124bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 2876194 2876544 . + . ID=id539;gbkey=repeat_region NC_005810.1 RefSeq gene 2876570 2877166 . + . ID=gene2681;Name=YP_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13450;old_locus_tag=YP2593%2CYP_2593 NC_005810.1 Protein Homology CDS 2876570 2877166 . + 0 ID=cds2627;Parent=gene2681;Dbxref=Genbank:WP_002228419.1;Name=WP_002228419.1;gbkey=CDS;product=nitrate reductase subunit delta;protein_id=WP_002228419.1;transl_table=11 NC_005810.1 RefSeq gene 2877163 2877732 . + . ID=gene2682;Name=YP_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13455;old_locus_tag=YP2594%2CYP_2594 NC_005810.1 Protein Homology CDS 2877163 2877732 . + 0 ID=cds2628;Parent=gene2682;Dbxref=Genbank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_002211606.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2877440 2877469 . + . ID=id540;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2877978 2878634 . - . ID=gene2683;Name=YP_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13460;old_locus_tag=YP2595%2CYP_2595 NC_005810.1 Protein Homology CDS 2877978 2878634 . - 0 ID=cds2629;Parent=gene2683;Dbxref=Genbank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211607.1;transl_table=11 NC_005810.1 RefSeq gene 2878631 2878987 . - . ID=gene2684;Name=YP_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13465;old_locus_tag=YP2596%2CYP_2596 NC_005810.1 Protein Homology CDS 2878631 2878987 . - 0 ID=cds2630;Parent=gene2684;Dbxref=Genbank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215846.1;transl_table=11 NC_005810.1 RefSeq gene 2879014 2879685 . - . ID=gene2685;Name=YP_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13470;old_locus_tag=YP2597%2CYP_2597 NC_005810.1 Protein Homology CDS 2879014 2879685 . - 0 ID=cds2631;Parent=gene2685;Dbxref=Genbank:WP_002215847.1;Name=WP_002215847.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215847.1;transl_table=11 NC_005810.1 RefSeq gene 2880275 2880706 . + . ID=gene2686;Name=YP_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13475;old_locus_tag=YP2598%2CYP_2598 NC_005810.1 Protein Homology CDS 2880275 2880706 . + 0 ID=cds2632;Parent=gene2686;Dbxref=Genbank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_002211610.1;transl_table=11 NC_005810.1 RefSeq gene 2880801 2881325 . - . ID=gene2687;Name=YP_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13480;old_locus_tag=YP2599%2CYP_2599 NC_005810.1 Protein Homology CDS 2880801 2881325 . - 0 ID=cds2633;Parent=gene2687;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11 NC_005810.1 RefSeq gene 2881532 2882767 . - . ID=gene2688;Name=YP_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13485;old_locus_tag=YP2600%2CYP_2600 NC_005810.1 Protein Homology CDS 2881532 2882767 . - 0 ID=cds2634;Parent=gene2688;Dbxref=Genbank:WP_002231034.1;Name=WP_002231034.1;gbkey=CDS;product=aspartate aminotransferase;protein_id=WP_002231034.1;transl_table=11 NC_005810.1 RefSeq gene 2883033 2884280 . + . ID=gene2689;Name=YP_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13490;old_locus_tag=YP2601%2CYP_2601 NC_005810.1 Protein Homology CDS 2883033 2884280 . + 0 ID=cds2635;Parent=gene2689;Dbxref=Genbank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211614.1;transl_table=11 NC_005810.1 RefSeq gene 2884358 2885329 . - . ID=gene2690;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YP_RS13495;old_locus_tag=YP2602%2CYP_2602 NC_005810.1 Protein Homology CDS 2884358 2885329 . - 0 ID=cds2636;Parent=gene2690;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NC_005810.1 RefSeq gene 2885510 2885986 . - . ID=gene2691;Name=YP_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13500;old_locus_tag=YP2603%2CYP_2603 NC_005810.1 Protein Homology CDS 2885510 2885986 . - 0 ID=cds2637;Parent=gene2691;Dbxref=Genbank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002211616.1;transl_table=11 NC_005810.1 RefSeq gene 2886089 2886967 . + . ID=gene2692;Name=YP_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13505;old_locus_tag=YP2604%2CYP_2604 NC_005810.1 Protein Homology CDS 2886089 2886967 . + 0 ID=cds2638;Parent=gene2692;Dbxref=Genbank:WP_002211617.1;Name=WP_002211617.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211617.1;transl_table=11 NC_005810.1 RefSeq gene 2887103 2888092 . + . ID=gene2693;Name=YP_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13510;old_locus_tag=YP2605%2CYP_2605 NC_005810.1 Protein Homology CDS 2887103 2888092 . + 0 ID=cds2639;Parent=gene2693;Dbxref=Genbank:WP_011171895.1;Name=WP_011171895.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_011171895.1;transl_table=11 NC_005810.1 RefSeq gene 2888362 2888676 . + . ID=gene2694;Name=YP_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13515;old_locus_tag=YP2606%2CYP_2606 NC_005810.1 Protein Homology CDS 2888362 2888676 . + 0 ID=cds2640;Parent=gene2694;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11 NC_005810.1 RefSeq gene 2888769 2889998 . - . ID=gene2695;Name=YP_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13520;old_locus_tag=YP2607%2CYP_2607 NC_005810.1 Protein Homology CDS 2888769 2889998 . - 0 ID=cds2641;Parent=gene2695;Dbxref=Genbank:WP_002231039.1;Name=WP_002231039.1;gbkey=CDS;product=manganese transporter;protein_id=WP_002231039.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2890223 2890254 . + . ID=id541;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2890449 2891633 . + . ID=gene2696;Name=YP_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13525;old_locus_tag=YP2608%2CYP_2608 NC_005810.1 Protein Homology CDS 2890449 2891633 . + 0 ID=cds2642;Parent=gene2696;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11 NC_005810.1 RefSeq gene 2892010 2892085 . - . ID=gene2697;Name=YP_RS13530;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS13530;old_locus_tag=tRNA-Lys_5%2CYP_t42 NC_005810.1 tRNAscan-SE tRNA 2892010 2892085 . - . ID=rna49;Parent=gene2697;anticodon=(pos:complement(2892050..2892052));gbkey=tRNA;product=tRNA-Lys NC_005810.1 tRNAscan-SE exon 2892010 2892085 . - . ID=id542;Parent=rna49;anticodon=(pos:complement(2892050..2892052));gbkey=tRNA;product=tRNA-Lys NC_005810.1 RefSeq gene 2892285 2892360 . - . ID=gene2698;Name=YP_RS13535;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS13535;old_locus_tag=tRNA-Val_3%2CYP_t43 NC_005810.1 tRNAscan-SE tRNA 2892285 2892360 . - . ID=rna50;Parent=gene2698;anticodon=(pos:complement(2892325..2892327));gbkey=tRNA;product=tRNA-Val NC_005810.1 tRNAscan-SE exon 2892285 2892360 . - . ID=id543;Parent=rna50;anticodon=(pos:complement(2892325..2892327));gbkey=tRNA;product=tRNA-Val NC_005810.1 RefSeq gene 2892405 2892480 . - . ID=gene2699;Name=YP_RS13540;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS13540;old_locus_tag=tRNA-Val_4%2CYP_t44 NC_005810.1 tRNAscan-SE tRNA 2892405 2892480 . - . ID=rna51;Parent=gene2699;anticodon=(pos:complement(2892445..2892447));gbkey=tRNA;product=tRNA-Val NC_005810.1 tRNAscan-SE exon 2892405 2892480 . - . ID=id544;Parent=rna51;anticodon=(pos:complement(2892445..2892447));gbkey=tRNA;product=tRNA-Val NC_005810.1 RefSeq gene 2892517 2892592 . - . ID=gene2700;Name=YP_RS13545;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS13545;old_locus_tag=tRNA-Val_5%2CYP_t45 NC_005810.1 tRNAscan-SE tRNA 2892517 2892592 . - . ID=rna52;Parent=gene2700;anticodon=(pos:complement(2892557..2892559));gbkey=tRNA;product=tRNA-Val NC_005810.1 tRNAscan-SE exon 2892517 2892592 . - . ID=id545;Parent=rna52;anticodon=(pos:complement(2892557..2892559));gbkey=tRNA;product=tRNA-Val NC_005810.1 RefSeq gene 2892867 2894282 . + . ID=gene2701;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YP_RS13550;old_locus_tag=YP2609%2CYP_2609 NC_005810.1 Protein Homology CDS 2892867 2894282 . + 0 ID=cds2643;Parent=gene2701;Dbxref=Genbank:WP_002222185.1;Name=WP_002222185.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_002222185.1;transl_table=11 NC_005810.1 RefSeq gene 2894514 2894589 . + . ID=gene2702;Name=YP_RS13555;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS13555;old_locus_tag=tRNA-Ala_3%2CYP_t46 NC_005810.1 tRNAscan-SE tRNA 2894514 2894589 . + . ID=rna53;Parent=gene2702;anticodon=(pos:2894547..2894549);gbkey=tRNA;product=tRNA-Ala NC_005810.1 tRNAscan-SE exon 2894514 2894589 . + . ID=id546;Parent=rna53;anticodon=(pos:2894547..2894549);gbkey=tRNA;product=tRNA-Ala NC_005810.1 RefSeq gene 2894784 2895389 . + . ID=gene2703;Name=YP_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13560;old_locus_tag=YP2610%2CYP_2610 NC_005810.1 Protein Homology CDS 2894784 2895389 . + 0 ID=cds2644;Parent=gene2703;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11 NC_005810.1 RefSeq gene 2895521 2895868 . + . ID=gene2704;Name=YP_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13565 NC_005810.1 Protein Homology CDS 2895521 2895868 . + 0 ID=cds2645;Parent=gene2704;Dbxref=Genbank:WP_002213372.1;Name=WP_002213372.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213372.1;transl_table=11 NC_005810.1 RefSeq gene 2895969 2896184 . - . ID=gene2705;Name=YP_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13570;old_locus_tag=YP2613%2CYP_2613 NC_005810.1 Protein Homology CDS 2895969 2896184 . - 0 ID=cds2646;Parent=gene2705;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11 NC_005810.1 RefSeq gene 2896204 2898216 . - . ID=gene2706;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YP_RS13575;old_locus_tag=YP2614%2CYP_2614 NC_005810.1 Protein Homology CDS 2896204 2898216 . - 0 ID=cds2647;Parent=gene2706;Dbxref=Genbank:WP_002213368.1;Name=WP_002213368.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=WP_002213368.1;transl_table=11 NC_005810.1 RefSeq gene 2898307 2899293 . - . ID=gene2707;Name=YP_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13580;old_locus_tag=YP2615%2CYP_2615 NC_005810.1 Protein Homology CDS 2898307 2899293 . - 0 ID=cds2648;Parent=gene2707;Dbxref=Genbank:WP_002227089.1;Name=WP_002227089.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_002227089.1;transl_table=11 NC_005810.1 RefSeq gene 2899542 2900276 . + . ID=gene2708;Name=YP_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13585;old_locus_tag=YP2616%2CYP_2616 NC_005810.1 Protein Homology CDS 2899542 2900276 . + 0 ID=cds2649;Parent=gene2708;Dbxref=Genbank:WP_002231042.1;Name=WP_002231042.1;gbkey=CDS;product=cysteine biosynthesis protein CysZ;protein_id=WP_002231042.1;transl_table=11 NC_005810.1 RefSeq gene 2900433 2901401 . + . ID=gene2709;Name=YP_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13590;old_locus_tag=YP2617%2CYP_2617 NC_005810.1 Protein Homology CDS 2900433 2901401 . + 0 ID=cds2650;Parent=gene2709;Dbxref=Genbank:WP_002222180.1;Name=WP_002222180.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11 NC_005810.1 RefSeq gene 2901900 2902157 . + . ID=gene2710;Name=YP_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13595;old_locus_tag=YP2618%2CYP_2618 NC_005810.1 Protein Homology CDS 2901900 2902157 . + 0 ID=cds2651;Parent=gene2710;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11 NC_005810.1 RefSeq gene 2902206 2903933 . + . ID=gene2711;Name=YP_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13600;old_locus_tag=YP2619%2CYP_2619 NC_005810.1 Protein Homology CDS 2902206 2903933 . + 0 ID=cds2652;Parent=gene2711;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11 NC_005810.1 RefSeq gene 2903982 2904491 . + . ID=gene2712;Name=YP_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13605;old_locus_tag=YP2620%2CYP_2620 NC_005810.1 Protein Homology CDS 2903982 2904491 . + 0 ID=cds2653;Parent=gene2712;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2904524 2905243 . + . ID=id547;gbkey=repeat_region NC_005810.1 RefSeq region 2904526 2905237 . - . ID=id548;gbkey=mobile_element NC_005810.1 RefSeq gene 2904634 2905092 . - . ID=gene2713;Name=YP_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13610;old_locus_tag=YP2621%2CYP_2621 NC_005810.1 Protein Homology CDS 2904634 2905092 . - 0 ID=cds2654;Parent=gene2713;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 2905082 2905276 . - . ID=gene2714;Name=YP_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13615 NC_005810.1 Protein Homology CDS 2905082 2905276 . - 0 ID=cds2655;Parent=gene2714;Dbxref=Genbank:WP_002430126.1;Name=WP_002430126.1;gbkey=CDS;product=invasin;protein_id=WP_002430126.1;transl_table=11 NC_005810.1 RefSeq gene 2905362 2906711 . - . ID=gene2715;Name=YP_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13620;old_locus_tag=YP2622%2CYP_2622 NC_005810.1 Protein Homology CDS 2905362 2906711 . - 0 ID=cds2656;Parent=gene2715;Dbxref=Genbank:WP_002208493.1;Name=WP_002208493.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208493.1;transl_table=11 NC_005810.1 RefSeq gene 2906737 2907420 . - . ID=gene2716;Name=YP_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13625;old_locus_tag=YP2623%2CYP_2623 NC_005810.1 Protein Homology CDS 2906737 2907420 . - 0 ID=cds2657;Parent=gene2716;Dbxref=Genbank:WP_002208494.1;Name=WP_002208494.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208494.1;transl_table=11 NC_005810.1 RefSeq gene 2907608 2908813 . + . ID=gene2717;Name=YP_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13630;old_locus_tag=YP2624%2CYP_2624 NC_005810.1 Protein Homology CDS 2907608 2908813 . + 0 ID=cds2658;Parent=gene2717;Dbxref=Genbank:WP_002208495.1;Name=WP_002208495.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002208495.1;transl_table=11 NC_005810.1 RefSeq gene 2908817 2910853 . + . ID=gene2718;Name=YP_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13635;old_locus_tag=YP2625%2CYP_2625 NC_005810.1 Protein Homology CDS 2908817 2910853 . + 0 ID=cds2659;Parent=gene2718;Dbxref=Genbank:WP_002208496.1;Name=WP_002208496.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002208496.1;transl_table=11 NC_005810.1 RefSeq gene 2911108 2912754 . - . ID=gene2719;Name=YP_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13640;old_locus_tag=YP2626%2CYP_2626 NC_005810.1 Protein Homology CDS 2911108 2912754 . - 0 ID=cds2660;Parent=gene2719;Dbxref=Genbank:WP_002208497.1;Name=WP_002208497.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_002208497.1;transl_table=11 NC_005810.1 RefSeq gene 2912814 2914274 . - . ID=gene2720;Name=YP_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13645;old_locus_tag=YP2627%2CYP_2627 NC_005810.1 Protein Homology CDS 2912814 2914274 . - 0 ID=cds2661;Parent=gene2720;Dbxref=Genbank:WP_002208498.1;Name=WP_002208498.1;gbkey=CDS;product=permease;protein_id=WP_002208498.1;transl_table=11 NC_005810.1 RefSeq gene 2914271 2914468 . - . ID=gene2721;Name=YP_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13650;old_locus_tag=YP2628%2CYP_2628 NC_005810.1 Protein Homology CDS 2914271 2914468 . - 0 ID=cds2662;Parent=gene2721;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11 NC_005810.1 RefSeq gene 2914611 2915618 . - . ID=gene2722;Name=YP_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13655;old_locus_tag=YP2629 NC_005810.1 Protein Homology CDS 2914611 2915618 . - 0 ID=cds2663;Parent=gene2722;Dbxref=Genbank:WP_002228411.1;Name=WP_002228411.1;gbkey=CDS;product=peptidase M24;protein_id=WP_002228411.1;transl_table=11 NC_005810.1 RefSeq gene 2915639 2915830 . - . ID=gene2723;Name=YP_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13660 NC_005810.1 Protein Homology CDS 2915639 2915830 . - 0 ID=cds2664;Parent=gene2723;Dbxref=Genbank:WP_002215018.1;Name=WP_002215018.1;gbkey=CDS;product=creatininase;protein_id=WP_002215018.1;transl_table=11 NC_005810.1 RefSeq gene 2915864 2917045 . - . ID=gene2724;Name=YP_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13665;old_locus_tag=YP2630%2CYP_2630 NC_005810.1 Protein Homology CDS 2915864 2917045 . - 0 ID=cds2665;Parent=gene2724;Dbxref=Genbank:WP_002208500.1;Name=WP_002208500.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002208500.1;transl_table=11 NC_005810.1 RefSeq gene 2917753 2919171 . + . ID=gene2725;Name=YP_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13670;old_locus_tag=YP2631%2CYP_2631 NC_005810.1 Protein Homology CDS 2917753 2919171 . + 0 ID=cds2666;Parent=gene2725;Dbxref=Genbank:WP_002208502.1;Name=WP_002208502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208502.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2919180 2919348 . + . ID=id549;gbkey=repeat_region NC_005810.1 RefSeq gene 2919404 2920948 . + . ID=gene2726;Name=YP_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13675;old_locus_tag=YP2632%2CYP_2632 NC_005810.1 Protein Homology CDS 2919404 2920948 . + 0 ID=cds2667;Parent=gene2726;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NC_005810.1 RefSeq gene 2920945 2921652 . + . ID=gene2727;Name=YP_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13680;old_locus_tag=YP2633%2CYP_2633 NC_005810.1 Protein Homology CDS 2920945 2921652 . + 0 ID=cds2668;Parent=gene2727;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11 NC_005810.1 RefSeq gene 2922033 2923265 . - . ID=gene2728;Name=YP_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13685;old_locus_tag=YP2634%2CYP_2634 NC_005810.1 Protein Homology CDS 2922033 2923265 . - 0 ID=cds2669;Parent=gene2728;Dbxref=Genbank:WP_002231044.1;Name=WP_002231044.1;gbkey=CDS;product=type III secretion protein GogB;protein_id=WP_002231044.1;transl_table=11 NC_005810.1 RefSeq gene 2923510 2924388 . - . ID=gene2729;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YP_RS13690;old_locus_tag=YP2635%2CYP_2635 NC_005810.1 Protein Homology CDS 2923510 2924388 . - 0 ID=cds2670;Parent=gene2729;Dbxref=Genbank:WP_002208508.1;Name=WP_002208508.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=WP_002208508.1;transl_table=11 NC_005810.1 RefSeq gene 2924559 2925650 . - . ID=gene2730;Name=YP_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13695;old_locus_tag=YP2636%2CYP_2636 NC_005810.1 Protein Homology CDS 2924559 2925650 . - 0 ID=cds2671;Parent=gene2730;Dbxref=Genbank:WP_002208509.1;Name=WP_002208509.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_002208509.1;transl_table=11 NC_005810.1 RefSeq gene 2925640 2926515 . - . ID=gene2731;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YP_RS13700;old_locus_tag=YP2637%2CYP_2637 NC_005810.1 Protein Homology CDS 2925640 2926515 . - 0 ID=cds2672;Parent=gene2731;Dbxref=Genbank:WP_002231045.1;Name=WP_002231045.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_002231045.1;transl_table=11 NC_005810.1 RefSeq gene 2926515 2927348 . - . ID=gene2732;Name=YP_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13705;old_locus_tag=YP2638%2CYP_2638 NC_005810.1 Protein Homology CDS 2926515 2927348 . - 0 ID=cds2673;Parent=gene2732;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11 NC_005810.1 RefSeq gene 2927348 2928385 . - . ID=gene2733;Name=YP_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13710;old_locus_tag=YP2639%2CYP_2639 NC_005810.1 Protein Homology CDS 2927348 2928385 . - 0 ID=cds2674;Parent=gene2733;Dbxref=Genbank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=WP_002208512.1;transl_table=11 NC_005810.1 RefSeq gene 2928700 2930232 . - . ID=gene2734;Name=YP_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13715;old_locus_tag=YP2640%2CYP_2640 NC_005810.1 Protein Homology CDS 2928700 2930232 . - 0 ID=cds2675;Parent=gene2734;Dbxref=Genbank:WP_002231046.1;Name=WP_002231046.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002231046.1;transl_table=11 NC_005810.1 RefSeq gene 2930837 2931715 . - . ID=gene2735;Name=YP_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13720;old_locus_tag=YP2641%2CYP_2641 NC_005810.1 Protein Homology CDS 2930837 2931715 . - 0 ID=cds2676;Parent=gene2735;Dbxref=Genbank:WP_002208514.1;Name=WP_002208514.1;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208514.1;transl_table=11 NC_005810.1 RefSeq gene 2931712 2931864 . - . ID=gene2736;Name=YP_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13725;old_locus_tag=YP2642%2CYP_2642 NC_005810.1 Protein Homology CDS 2931712 2931864 . - 0 ID=cds2677;Parent=gene2736;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11 NC_005810.1 RefSeq gene 2931904 2932374 . - . ID=gene2737;Name=YP_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13730;old_locus_tag=YP2643%2CYP_2643 NC_005810.1 Protein Homology CDS 2931904 2932374 . - 0 ID=cds2678;Parent=gene2737;Dbxref=Genbank:WP_002208515.1;Name=WP_002208515.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_002208515.1;transl_table=11 NC_005810.1 RefSeq gene 2932456 2933328 . - . ID=gene2738;Name=YP_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13735;old_locus_tag=YP2644%2CYP_2644 NC_005810.1 Protein Homology CDS 2932456 2933328 . - 0 ID=cds2679;Parent=gene2738;Dbxref=Genbank:WP_002208516.1;Name=WP_002208516.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208516.1;transl_table=11 NC_005810.1 RefSeq gene 2933597 2934724 . + . ID=gene2739;Name=YP_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13740;old_locus_tag=YP2645%2CYP_2645 NC_005810.1 Protein Homology CDS 2933597 2934724 . + 0 ID=cds2680;Parent=gene2739;Dbxref=Genbank:WP_002224823.1;Name=WP_002224823.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224823.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2933905 2934111 . + . ID=id550;Note=degenerate repeat region containing 3 copies of a 69bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2935008 2935631 . + . ID=gene2740;Name=YP_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13745;old_locus_tag=YP2646%2CYP_2646 NC_005810.1 Protein Homology CDS 2935008 2935631 . + 0 ID=cds2681;Parent=gene2740;Dbxref=Genbank:WP_002354634.1;Name=WP_002354634.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_002354634.1;transl_table=11 NC_005810.1 RefSeq gene 2935694 2936587 . + . ID=gene2741;Name=YP_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13750;old_locus_tag=YP2647%2CYP_2647 NC_005810.1 Protein Homology CDS 2935694 2936587 . + 0 ID=cds2682;Parent=gene2741;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11 NC_005810.1 RefSeq gene 2936685 2937584 . - . ID=gene2742;Name=YP_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13755;old_locus_tag=YP2648%2CYP_2648 NC_005810.1 Protein Homology CDS 2936685 2937584 . - 0 ID=cds2683;Parent=gene2742;Dbxref=Genbank:WP_002208519.1;Name=WP_002208519.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_002208519.1;transl_table=11 NC_005810.1 RefSeq gene 2937762 2938373 . - . ID=gene2743;Name=YP_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13760;old_locus_tag=YP2649%2CYP_2649 NC_005810.1 Protein Homology CDS 2937762 2938373 . - 0 ID=cds2684;Parent=gene2743;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11 NC_005810.1 RefSeq gene 2938732 2939145 . + . ID=gene2744;Name=YP_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13765;old_locus_tag=YP2650%2CYP_2650 NC_005810.1 Protein Homology CDS 2938732 2939145 . + 0 ID=cds2685;Parent=gene2744;Dbxref=Genbank:WP_002208522.1;Name=WP_002208522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208522.1;transl_table=11 NC_005810.1 RefSeq gene 2939632 2941911 . + . ID=gene2745;Name=YP_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13770;old_locus_tag=YP2651%2CYP_2651 NC_005810.1 Protein Homology CDS 2939632 2941911 . + 0 ID=cds2686;Parent=gene2745;Dbxref=Genbank:WP_002208523.1;Name=WP_002208523.1;gbkey=CDS;product=autotransporter;protein_id=WP_002208523.1;transl_table=11 NC_005810.1 RefSeq gene 2942003 2942419 . - . ID=gene2746;Name=YP_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13775;old_locus_tag=YP2652%2CYP_2652 NC_005810.1 Protein Homology CDS 2942003 2942419 . - 0 ID=cds2687;Parent=gene2746;Dbxref=Genbank:WP_002208524.1;Name=WP_002208524.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208524.1;transl_table=11 NC_005810.1 RefSeq gene 2942525 2942710 . + . ID=gene2747;Name=YP_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13780;old_locus_tag=YP2653%2CYP_2653 NC_005810.1 Protein Homology CDS 2942525 2942710 . + 0 ID=cds2688;Parent=gene2747;Dbxref=Genbank:WP_002216562.1;Name=WP_002216562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216562.1;transl_table=11 NC_005810.1 RefSeq gene 2942892 2943317 . - . ID=gene2748;Name=YP_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13785;old_locus_tag=YP2654%2CYP_2654 NC_005810.1 Protein Homology CDS 2942892 2943317 . - 0 ID=cds2689;Parent=gene2748;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NC_005810.1 RefSeq gene 2943600 2944529 . + . ID=gene2749;Name=YP_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13790;old_locus_tag=YP2655%2CYP_2655 NC_005810.1 Protein Homology CDS 2943600 2944529 . + 0 ID=cds2690;Parent=gene2749;Dbxref=Genbank:WP_002208526.1;Name=WP_002208526.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002208526.1;transl_table=11 NC_005810.1 RefSeq gene 2944529 2944987 . + . ID=gene2750;Name=YP_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13795;old_locus_tag=YP2656%2CYP_2656 NC_005810.1 Protein Homology CDS 2944529 2944987 . + 0 ID=cds2691;Parent=gene2750;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11 NC_005810.1 RefSeq gene 2945138 2947417 . - . ID=gene2751;Name=YP_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13800;old_locus_tag=YP2657%2CYP_2657 NC_005810.1 Protein Homology CDS 2945138 2947417 . - 0 ID=cds2692;Parent=gene2751;Dbxref=Genbank:WP_002224829.1;Name=WP_002224829.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=NADP-dependent malic enzyme;protein_id=WP_002224829.1;transl_table=11 NC_005810.1 RefSeq gene 2947613 2948209 . - . ID=gene2752;Name=YP_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13805;old_locus_tag=YP2658%2CYP_2658 NC_005810.1 Protein Homology CDS 2947613 2948209 . - 0 ID=cds2693;Parent=gene2752;Dbxref=Genbank:WP_002208529.1;Name=WP_002208529.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11 NC_005810.1 RefSeq gene 2948394 2948993 . - . ID=gene2753;Name=YP_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13810;old_locus_tag=YP2659%2CYP_2659 NC_005810.1 Protein Homology CDS 2948394 2948993 . - 0 ID=cds2694;Parent=gene2753;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11 NC_005810.1 RefSeq gene 2949021 2949488 . - . ID=gene2754;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YP_RS13815;old_locus_tag=YP2660%2CYP_2660 NC_005810.1 Protein Homology CDS 2949021 2949488 . - 0 ID=cds2695;Parent=gene2754;Dbxref=Genbank:WP_002208532.1;Name=WP_002208532.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_002208532.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2949536 2949569 . + . ID=id551;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2949571 2952063 . - . ID=gene2755;Name=YP_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13820;old_locus_tag=YP2661%2CYP_2661 NC_005810.1 Protein Homology CDS 2949571 2952063 . - 0 ID=cds2696;Parent=gene2755;Dbxref=Genbank:WP_011171900.1;Name=WP_011171900.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_011171900.1;transl_table=11 NC_005810.1 RefSeq gene 2952060 2952326 . - . ID=gene2756;Name=YP_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13825;old_locus_tag=YP2662%2CYP_2662 NC_005810.1 Protein Homology CDS 2952060 2952326 . - 0 ID=cds2697;Parent=gene2756;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11 NC_005810.1 RefSeq gene 2952316 2952819 . - . ID=gene2757;Name=YP_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13830;old_locus_tag=YP2663%2CYP_2663 NC_005810.1 Protein Homology CDS 2952316 2952819 . - 0 ID=cds2698;Parent=gene2757;Dbxref=Genbank:WP_002231048.1;Name=WP_002231048.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002231048.1;transl_table=11 NC_005810.1 RefSeq gene 2953652 2954281 . + . ID=gene2758;Name=YP_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13835;old_locus_tag=YP2664%2CYP_2664 NC_005810.1 Protein Homology CDS 2953652 2954281 . + 0 ID=cds2699;Parent=gene2758;Dbxref=Genbank:WP_002208537.1;Name=WP_002208537.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208537.1;transl_table=11 NC_005810.1 RefSeq gene 2954294 2954572 . - . ID=gene2759;Name=YP_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13840;old_locus_tag=YP2665%2CYP_2665 NC_005810.1 Protein Homology CDS 2954294 2954572 . - 0 ID=cds2700;Parent=gene2759;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11 NC_005810.1 RefSeq gene 2954987 2958118 . + . ID=gene2760;Name=YP_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13845;old_locus_tag=YP2666%2CYP_2666 NC_005810.1 Protein Homology CDS 2954987 2958118 . + 0 ID=cds2701;Parent=gene2760;Dbxref=Genbank:WP_002208539.1;Name=WP_002208539.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002208539.1;transl_table=11 NC_005810.1 RefSeq gene 2958349 2958933 . + . ID=gene2761;Name=YP_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13850;old_locus_tag=YP2667%2CYP_2667 NC_005810.1 Protein Homology CDS 2958349 2958933 . + 0 ID=cds2702;Parent=gene2761;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NC_005810.1 RefSeq gene 2959222 2959770 . + . ID=gene2762;Name=YP_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13855;old_locus_tag=YP2668%2CYP_2668 NC_005810.1 Protein Homology CDS 2959222 2959770 . + 0 ID=cds2703;Parent=gene2762;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11 NC_005810.1 RefSeq gene 2960524 2960892 . - . ID=gene2763;Name=YP_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13860;old_locus_tag=YP2669 NC_005810.1 Protein Homology CDS 2960524 2960892 . - 0 ID=cds2704;Parent=gene2763;Dbxref=Genbank:WP_016595299.1;Name=WP_016595299.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016595299.1;transl_table=11 NC_005810.1 RefSeq gene 2961439 2962509 . - . ID=gene2764;Name=YP_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13870;old_locus_tag=YP2670%2CYP_2670 NC_005810.1 Protein Homology CDS 2961439 2962509 . - 0 ID=cds2705;Parent=gene2764;Dbxref=Genbank:WP_002208544.1;Name=WP_002208544.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208544.1;transl_table=11 NC_005810.1 RefSeq gene 2962502 2964264 . - . ID=gene2765;Name=YP_RS13875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS13875;old_locus_tag=YP2671;pseudo=true NC_005810.1 Protein Homology CDS 2962502 2964264 . - 0 ID=cds2706;Parent=gene2765;exception=annotated by transcript or proteomic data;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 2964359 2965447 . - . ID=gene2766;Name=YP_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13880;old_locus_tag=YP2672%2CYP_2672 NC_005810.1 Protein Homology CDS 2964359 2965447 . - 0 ID=cds2707;Parent=gene2766;Dbxref=Genbank:WP_002208546.1;Name=WP_002208546.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208546.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2965697 2965726 . + . ID=id552;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2965758 2966231 . + . ID=gene2767;Name=YP_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13885;old_locus_tag=YP2673%2CYP_2673 NC_005810.1 Protein Homology CDS 2965758 2966231 . + 0 ID=cds2708;Parent=gene2767;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11 NC_005810.1 RefSeq gene 2966391 2966789 . + . ID=gene2768;Name=YP_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13890;old_locus_tag=YP2674%2CYP_2674 NC_005810.1 Protein Homology CDS 2966391 2966789 . + 0 ID=cds2709;Parent=gene2768;Dbxref=Genbank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;product=reductase;protein_id=WP_002208548.1;transl_table=11 NC_005810.1 RefSeq gene 2966791 2967918 . + . ID=gene2769;Name=YP_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13895;old_locus_tag=YP2675%2CYP_2675 NC_005810.1 Protein Homology CDS 2966791 2967918 . + 0 ID=cds2710;Parent=gene2769;Dbxref=Genbank:WP_002208549.1;Name=WP_002208549.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NC_005810.1 RefSeq gene 2967915 2968592 . + . ID=gene2770;Name=YP_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13900;old_locus_tag=YP2676%2CYP_2676 NC_005810.1 Protein Homology CDS 2967915 2968592 . + 0 ID=cds2711;Parent=gene2770;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11 NC_005810.1 RefSeq gene 2968660 2968854 . + . ID=gene2771;Name=YP_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13905;old_locus_tag=YP2677%2CYP_2677 NC_005810.1 Protein Homology CDS 2968660 2968854 . + 0 ID=cds2712;Parent=gene2771;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11 NC_005810.1 RefSeq gene 2969059 2971158 . - . ID=gene2772;Name=YP_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13910;old_locus_tag=YP2678%2CYP_2678 NC_005810.1 Protein Homology CDS 2969059 2971158 . - 0 ID=cds2713;Parent=gene2772;Dbxref=Genbank:WP_011171902.1;Name=WP_011171902.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=methionine tRNA cytidine acetyltransferase;protein_id=WP_011171902.1;transl_table=11 NC_005810.1 RefSeq gene 2971160 2971612 . - . ID=gene2773;Name=YP_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13915;old_locus_tag=YP2679%2CYP_2679 NC_005810.1 Protein Homology CDS 2971160 2971612 . - 0 ID=cds2714;Parent=gene2773;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11 NC_005810.1 RefSeq gene 2971706 2972572 . - . ID=gene2774;Name=YP_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13920;old_locus_tag=YP2680%2CYP_2680 NC_005810.1 Protein Homology CDS 2971706 2972572 . - 0 ID=cds2715;Parent=gene2774;Dbxref=Genbank:WP_002208554.1;Name=WP_002208554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208554.1;transl_table=11 NC_005810.1 RefSeq gene 2972791 2973504 . - . ID=gene2775;Name=YP_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13925;old_locus_tag=YP2681%2CYP_2681 NC_005810.1 Protein Homology CDS 2972791 2973504 . - 0 ID=cds2716;Parent=gene2775;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2973542 2974259 . + . ID=id553;gbkey=repeat_region NC_005810.1 RefSeq region 2973544 2974255 . - . ID=id554;gbkey=mobile_element NC_005810.1 RefSeq gene 2973652 2974110 . - . ID=gene2776;Name=YP_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13930;old_locus_tag=YP2682%2CYP_2682 NC_005810.1 Protein Homology CDS 2973652 2974110 . - 0 ID=cds2717;Parent=gene2776;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 2974100 2974255 . - . ID=gene2777;Name=YP_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13935 NC_005810.1 Protein Homology CDS 2974100 2974255 . - 0 ID=cds2718;Parent=gene2777;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_005810.1 RefSeq gene 2974285 2975343 . - . ID=gene2778;Name=YP_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13940;old_locus_tag=YP2683%2CYP_2683 NC_005810.1 Protein Homology CDS 2974285 2975343 . - 0 ID=cds2719;Parent=gene2778;Dbxref=Genbank:WP_002208557.1;Name=WP_002208557.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_002208557.1;transl_table=11 NC_005810.1 RefSeq gene 2975361 2976242 . - . ID=gene2779;Name=YP_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13945;old_locus_tag=YP2684%2CYP_2684 NC_005810.1 Protein Homology CDS 2975361 2976242 . - 0 ID=cds2720;Parent=gene2779;Dbxref=Genbank:WP_002227834.1;Name=WP_002227834.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NC_005810.1 RefSeq gene 2976407 2976976 . + . ID=gene2780;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YP_RS13950;old_locus_tag=YP2685%2CYP_2685 NC_005810.1 Protein Homology CDS 2976407 2976976 . + 0 ID=cds2721;Parent=gene2780;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11 NC_005810.1 RefSeq gene 2976979 2977449 . + . ID=gene2781;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YP_RS13955;old_locus_tag=YP2686%2CYP_2686 NC_005810.1 Protein Homology CDS 2976979 2977449 . + 0 ID=cds2722;Parent=gene2781;Dbxref=Genbank:WP_002224836.1;Name=WP_002224836.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_002224836.1;transl_table=11 NC_005810.1 RefSeq gene 2977693 2978112 . - . ID=gene2782;Name=YP_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13960;old_locus_tag=YP2687%2CYP_2687 NC_005810.1 Protein Homology CDS 2977693 2978112 . - 0 ID=cds2723;Parent=gene2782;Dbxref=Genbank:WP_002217563.1;Name=WP_002217563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217563.1;transl_table=11 NC_005810.1 RefSeq gene 2978116 2978811 . - . ID=gene2783;Name=YP_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13965;old_locus_tag=YP2688%2CYP_2688 NC_005810.1 Protein Homology CDS 2978116 2978811 . - 0 ID=cds2724;Parent=gene2783;Dbxref=Genbank:WP_002208561.1;Name=WP_002208561.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208561.1;transl_table=11 NC_005810.1 RefSeq gene 2979149 2979322 . + . ID=gene2784;Name=YP_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13970;old_locus_tag=YP2689%2CYP_2689 NC_005810.1 Protein Homology CDS 2979149 2979322 . + 0 ID=cds2725;Parent=gene2784;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2979299 2979332 . + . ID=id555;Note=exact repeat region containing 2 copies of a 17 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2979411 2980475 . - . ID=gene2785;Name=YP_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13975;old_locus_tag=YP2690%2CYP_2690 NC_005810.1 Protein Homology CDS 2979411 2980475 . - 0 ID=cds2726;Parent=gene2785;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11 NC_005810.1 RefSeq gene 2980806 2982290 . + . ID=gene2786;Name=YP_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13980;old_locus_tag=YP2691%2CYP_2691 NC_005810.1 Protein Homology CDS 2980806 2982290 . + 0 ID=cds2727;Parent=gene2786;Dbxref=Genbank:WP_002217569.1;Name=WP_002217569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217569.1;transl_table=11 NC_005810.1 RefSeq gene 2982397 2982753 . + . ID=gene2787;Name=YP_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13985;old_locus_tag=YP2692 NC_005810.1 Protein Homology CDS 2982397 2982753 . + 0 ID=cds2728;Parent=gene2787;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11 NC_005810.1 RefSeq gene 2982965 2983672 . - . ID=gene2788;Name=YP_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13990;old_locus_tag=YP2693%2CYP_2693 NC_005810.1 Protein Homology CDS 2982965 2983672 . - 0 ID=cds2729;Parent=gene2788;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2983751 2984470 . + . ID=id556;gbkey=repeat_region NC_005810.1 RefSeq region 2983752 2984463 . - . ID=id557;gbkey=mobile_element NC_005810.1 RefSeq gene 2983860 2984318 . - . ID=gene2789;Name=YP_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS13995;old_locus_tag=YP2694%2CYP_2694 NC_005810.1 Protein Homology CDS 2983860 2984318 . - 0 ID=cds2730;Parent=gene2789;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 2984494 2985120 . - . ID=gene2790;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YP_RS14000;old_locus_tag=YP2695%2CYP_2695 NC_005810.1 Protein Homology CDS 2984494 2985120 . - 0 ID=cds2731;Parent=gene2790;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NC_005810.1 RefSeq gene 2985517 2986560 . + . ID=gene2791;Name=YP_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14005;old_locus_tag=YP2696%2CYP_2696 NC_005810.1 Protein Homology CDS 2985517 2986560 . + 0 ID=cds2732;Parent=gene2791;Dbxref=Genbank:WP_002209777.1;Name=WP_002209777.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002209777.1;transl_table=11 NC_005810.1 RefSeq gene 2986675 2987313 . + . ID=gene2792;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YP_RS14010;old_locus_tag=YP2697%2CYP_2697 NC_005810.1 Protein Homology CDS 2986675 2987313 . + 0 ID=cds2733;Parent=gene2792;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NC_005810.1 RefSeq gene 2987542 2988087 . + . ID=gene2793;Name=YP_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14015;old_locus_tag=YP2698%2CYP_2698 NC_005810.1 Protein Homology CDS 2987542 2988087 . + 0 ID=cds2734;Parent=gene2793;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NC_005810.1 RefSeq gene 2988181 2988903 . - . ID=gene2794;Name=YP_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14020 NC_005810.1 Protein Homology CDS 2988181 2988903 . - 0 ID=cds2735;Parent=gene2794;Dbxref=Genbank:WP_002214662.1;Name=WP_002214662.1;gbkey=CDS;product=N-methylation of lysine residues in flagellin;protein_id=WP_002214662.1;transl_table=11 NC_005810.1 RefSeq gene 2988990 2989370 . - . ID=gene2795;Name=YP_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14025 NC_005810.1 Protein Homology CDS 2988990 2989370 . - 0 ID=cds2736;Parent=gene2795;Dbxref=Genbank:WP_002214664.1;Name=WP_002214664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214664.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2989461 2989530 . + . ID=id558;Note=exact repeat region containing 5 copies of a 14 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2989626 2990438 . - . ID=gene2796;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YP_RS14030;old_locus_tag=YP2700%2CYP_2700 NC_005810.1 Protein Homology CDS 2989626 2990438 . - 0 ID=cds2737;Parent=gene2796;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11 NC_005810.1 RefSeq gene 2990466 2992163 . - . ID=gene2797;Name=YP_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14035;old_locus_tag=YP2701%2CYP_2701 NC_005810.1 Protein Homology CDS 2990466 2992163 . - 0 ID=cds2738;Parent=gene2797;Dbxref=Genbank:WP_011906323.1;Name=WP_011906323.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_011906323.1;transl_table=11 NC_005810.1 RefSeq gene 2992163 2994394 . - . ID=gene2798;Name=YP_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14040;old_locus_tag=YP2702%2CYP_2702 NC_005810.1 Protein Homology CDS 2992163 2994394 . - 0 ID=cds2739;Parent=gene2798;Dbxref=Genbank:WP_002214670.1;Name=WP_002214670.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_002214670.1;transl_table=11 NC_005810.1 RefSeq repeat_region 2994491 2994516 . + . ID=id559;Note=degenerate repeat region containing 2 copies of a 13bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 2994665 2996728 . + . ID=gene2799;Name=YP_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14045;old_locus_tag=YP2703%2CYP_2703 NC_005810.1 Protein Homology CDS 2994665 2996728 . + 0 ID=cds2740;Parent=gene2799;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11 NC_005810.1 RefSeq gene 2996739 2998298 . + . ID=gene2800;Name=YP_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14050;old_locus_tag=YP2704%2CYP_2704 NC_005810.1 Protein Homology CDS 2996739 2998298 . + 0 ID=cds2741;Parent=gene2800;Dbxref=Genbank:WP_002209783.1;Name=WP_002209783.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NC_005810.1 RefSeq gene 2998434 2998622 . + . ID=gene2801;Name=YP_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14055;old_locus_tag=YP2705%2CYP_2705 NC_005810.1 Protein Homology CDS 2998434 2998622 . + 0 ID=cds2742;Parent=gene2801;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11 NC_005810.1 RefSeq gene 2998674 3000149 . + . ID=gene2802;Name=YP_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14060;old_locus_tag=YP2706%2CYP_2706 NC_005810.1 Protein Homology CDS 2998674 3000149 . + 0 ID=cds2743;Parent=gene2802;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11 NC_005810.1 RefSeq gene 3000289 3001641 . + . ID=gene2803;Name=YP_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14065;old_locus_tag=YP2707%2CYP_2707 NC_005810.1 Protein Homology CDS 3000289 3001641 . + 0 ID=cds2744;Parent=gene2803;Dbxref=Genbank:WP_002209785.1;Name=WP_002209785.1;gbkey=CDS;product=chaperone;protein_id=WP_002209785.1;transl_table=11 NC_005810.1 RefSeq gene 3001913 3002761 . - . ID=gene2804;Name=YP_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14070;old_locus_tag=YP2708%2CYP_2708 NC_005810.1 Protein Homology CDS 3001913 3002761 . - 0 ID=cds2745;Parent=gene2804;Dbxref=Genbank:WP_002209786.1;Name=WP_002209786.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NC_005810.1 RefSeq gene 3002823 3004088 . - . ID=gene2805;Name=YP_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14075;old_locus_tag=YP2709%2CYP_2709 NC_005810.1 Protein Homology CDS 3002823 3004088 . - 0 ID=cds2746;Parent=gene2805;Dbxref=Genbank:WP_016604009.1;Name=WP_016604009.1;gbkey=CDS;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_016604009.1;transl_table=11 NC_005810.1 RefSeq gene 3004135 3005163 . - . ID=gene2806;Name=YP_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14080;old_locus_tag=YP2710%2CYP_2710 NC_005810.1 Protein Homology CDS 3004135 3005163 . - 0 ID=cds2747;Parent=gene2806;Dbxref=Genbank:WP_002209788.1;Name=WP_002209788.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_002209788.1;transl_table=11 NC_005810.1 RefSeq gene 3005216 3006505 . - . ID=gene2807;Name=YP_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14085;old_locus_tag=YP2711%2CYP_2711 NC_005810.1 Protein Homology CDS 3005216 3006505 . - 0 ID=cds2748;Parent=gene2807;Dbxref=Genbank:WP_002209789.1;Name=WP_002209789.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_002209789.1;transl_table=11 NC_005810.1 RefSeq gene 3006687 3008192 . + . ID=gene2808;Name=YP_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14090;old_locus_tag=YP2712%2CYP_2712 NC_005810.1 Protein Homology CDS 3006687 3008192 . + 0 ID=cds2749;Parent=gene2808;Dbxref=Genbank:WP_002209790.1;Name=WP_002209790.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002209790.1;transl_table=11 NC_005810.1 RefSeq gene 3008575 3009660 . + . ID=gene2809;Name=YP_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14095;old_locus_tag=YP2713%2CYP_2713 NC_005810.1 Protein Homology CDS 3008575 3009660 . + 0 ID=cds2750;Parent=gene2809;Dbxref=Genbank:WP_002209791.1;Name=WP_002209791.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209791.1;transl_table=11 NC_005810.1 RefSeq gene 3010024 3011358 . + . ID=gene2810;Name=YP_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14100;old_locus_tag=YP2714%2CYP_2714 NC_005810.1 Protein Homology CDS 3010024 3011358 . + 0 ID=cds2751;Parent=gene2810;Dbxref=Genbank:WP_002214676.1;Name=WP_002214676.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_002214676.1;transl_table=11 NC_005810.1 RefSeq gene 3011358 3014516 . + . ID=gene2811;Name=YP_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14105;old_locus_tag=YP2715%2CYP_2715 NC_005810.1 Protein Homology CDS 3011358 3014516 . + 0 ID=cds2752;Parent=gene2811;Dbxref=Genbank:WP_002209793.1;Name=WP_002209793.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_002209793.1;transl_table=11 NC_005810.1 RefSeq gene 3014513 3017587 . + . ID=gene2812;Name=YP_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14110;old_locus_tag=YP2716%2CYP_2716 NC_005810.1 Protein Homology CDS 3014513 3017587 . + 0 ID=cds2753;Parent=gene2812;Dbxref=Genbank:WP_002209794.1;Name=WP_002209794.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_002209794.1;transl_table=11 NC_005810.1 RefSeq gene 3017621 3019018 . + . ID=gene2813;Name=YP_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14115;old_locus_tag=YP2717%2CYP_2717 NC_005810.1 Protein Homology CDS 3017621 3019018 . + 0 ID=cds2754;Parent=gene2813;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11 NC_005810.1 RefSeq gene 3019052 3020434 . + . ID=gene2814;Name=YP_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14120;old_locus_tag=YP2718%2CYP_2718 NC_005810.1 Protein Homology CDS 3019052 3020434 . + 0 ID=cds2755;Parent=gene2814;Dbxref=Genbank:WP_032466694.1;Name=WP_032466694.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_032466694.1;transl_table=11 NC_005810.1 RefSeq gene 3020444 3021163 . + . ID=gene2815;Name=YP_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14125;old_locus_tag=YP2719%2CYP_2719 NC_005810.1 Protein Homology CDS 3020444 3021163 . + 0 ID=cds2756;Parent=gene2815;Dbxref=Genbank:WP_002209796.1;Name=WP_002209796.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209796.1;transl_table=11 NC_005810.1 RefSeq gene 3021300 3021638 . + . ID=gene2816;Name=YP_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14130;old_locus_tag=YP2720%2CYP_2720 NC_005810.1 Protein Homology CDS 3021300 3021638 . + 0 ID=cds2757;Parent=gene2816;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11 NC_005810.1 RefSeq gene 3021913 3023307 . + . ID=gene2817;Name=YP_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14135;old_locus_tag=YP2721%2CYP_2721 NC_005810.1 Protein Homology CDS 3021913 3023307 . + 0 ID=cds2758;Parent=gene2817;Dbxref=Genbank:WP_002209798.1;Name=WP_002209798.1;gbkey=CDS;product=protease;protein_id=WP_002209798.1;transl_table=11 NC_005810.1 RefSeq gene 3023943 3024833 . + . ID=gene2818;Name=YP_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14140;old_locus_tag=YP2722%2CYP_2722 NC_005810.1 Protein Homology CDS 3023943 3024833 . + 0 ID=cds2759;Parent=gene2818;Dbxref=Genbank:WP_002209799.1;Name=WP_002209799.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_002209799.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3024970 3025009 . + . ID=id560;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3025120 3025629 . - . ID=gene2819;Name=YP_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14145;old_locus_tag=YP2723%2CYP_2723 NC_005810.1 Protein Homology CDS 3025120 3025629 . - 0 ID=cds2760;Parent=gene2819;Dbxref=Genbank:WP_002209800.1;Name=WP_002209800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209800.1;transl_table=11 NC_005810.1 RefSeq gene 3025860 3026747 . + . ID=gene2820;Name=YP_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14150;old_locus_tag=YP2724%2CYP_2724 NC_005810.1 Protein Homology CDS 3025860 3026747 . + 0 ID=cds2761;Parent=gene2820;Dbxref=Genbank:WP_002231002.1;Name=WP_002231002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231002.1;transl_table=11 NC_005810.1 RefSeq gene 3026809 3027609 . - . ID=gene2821;Name=YP_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14155;old_locus_tag=YP2725%2CYP_2725 NC_005810.1 Protein Homology CDS 3026809 3027609 . - 0 ID=cds2762;Parent=gene2821;Dbxref=Genbank:WP_002209801.1;Name=WP_002209801.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_002209801.1;transl_table=11 NC_005810.1 RefSeq gene 3028131 3028598 . + . ID=gene2822;Name=YP_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14160;old_locus_tag=YP2726%2CYP_2726 NC_005810.1 Protein Homology CDS 3028131 3028598 . + 0 ID=cds2763;Parent=gene2822;Dbxref=Genbank:WP_002209803.1;Name=WP_002209803.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209803.1;transl_table=11 NC_005810.1 RefSeq gene 3028657 3028935 . + . ID=gene2823;Name=YP_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14165;old_locus_tag=YP2727 NC_005810.1 Protein Homology CDS 3028657 3028935 . + 0 ID=cds2764;Parent=gene2823;Dbxref=Genbank:WP_002209804.1;Name=WP_002209804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209804.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3028908 3030227 . + . ID=id561;gbkey=repeat_region NC_005810.1 RefSeq region 3028912 3030226 . - . ID=id562;gbkey=mobile_element NC_005810.1 RefSeq gene 3028947 3030155 . - . ID=gene2824;Name=YP_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14170;old_locus_tag=YP2728%2CYP_2728 NC_005810.1 Protein Homology CDS 3028947 3030155 . - 0 ID=cds2765;Parent=gene2824;Dbxref=Genbank:WP_011171908.1;Name=WP_011171908.1;gbkey=CDS;product=transposase;protein_id=WP_011171908.1;transl_table=11 NC_005810.1 RefSeq gene 3030202 3030861 . + . ID=gene2825;Name=YP_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14175;old_locus_tag=YP2729 NC_005810.1 Protein Homology CDS 3030202 3030861 . + 0 ID=cds2766;Parent=gene2825;Dbxref=Genbank:WP_041175917.1;Name=WP_041175917.1;gbkey=CDS;product=membrane protein;protein_id=WP_041175917.1;transl_table=11 NC_005810.1 RefSeq gene 3030858 3031253 . + . ID=gene2826;Name=YP_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14180;old_locus_tag=YP2730 NC_005810.1 Protein Homology CDS 3030858 3031253 . + 0 ID=cds2767;Parent=gene2826;Dbxref=Genbank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216980.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3031126 3031805 . + . ID=id563;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3031126 3031803 . + . ID=id564;Note=degenerate repeat region containing 2 copies of a 339bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3031485 3032398 . + . ID=id565;Note=degenerate repeat region containing 2 copies of a 457bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3031656 3032051 . + . ID=gene2827;Name=YP_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14185;old_locus_tag=YP2731%2CYP_2731 NC_005810.1 Protein Homology CDS 3031656 3032051 . + 0 ID=cds2768;Parent=gene2827;Dbxref=Genbank:WP_002216979.1;Name=WP_002216979.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216979.1;transl_table=11 NC_005810.1 RefSeq gene 3032113 3032508 . + . ID=gene2828;Name=YP_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14190;old_locus_tag=YP2732%2CYP_2732 NC_005810.1 Protein Homology CDS 3032113 3032508 . + 0 ID=cds2769;Parent=gene2828;Dbxref=Genbank:WP_032484809.1;Name=WP_032484809.1;gbkey=CDS;product=membrane protein;protein_id=WP_032484809.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3032407 3032552 . + . ID=id566;gbkey=repeat_region NC_005810.1 RefSeq gene 3032572 3032970 . + . ID=gene2829;Name=YP_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14195;old_locus_tag=YP2733%2CYP_2733 NC_005810.1 Protein Homology CDS 3032572 3032970 . + 0 ID=cds2770;Parent=gene2829;Dbxref=Genbank:WP_002216975.1;Name=WP_002216975.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216975.1;transl_table=11 NC_005810.1 RefSeq gene 3032994 3033473 . + . ID=gene2830;Name=YP_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14200;old_locus_tag=YP2734%2CYP_2734 NC_005810.1 Protein Homology CDS 3032994 3033473 . + 0 ID=cds2771;Parent=gene2830;Dbxref=Genbank:WP_002209806.1;Name=WP_002209806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209806.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3033522 3034244 . + . ID=id567;gbkey=repeat_region NC_005810.1 RefSeq region 3033525 3034236 . - . ID=id568;gbkey=mobile_element NC_005810.1 RefSeq gene 3033633 3034091 . - . ID=gene2831;Name=YP_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14205;old_locus_tag=YP2735%2CYP_2735 NC_005810.1 Protein Homology CDS 3033633 3034091 . - 0 ID=cds2772;Parent=gene2831;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 3034081 3034254 . - . ID=gene2832;Name=YP_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14210 NC_005810.1 Protein Homology CDS 3034081 3034254 . - 0 ID=cds2773;Parent=gene2832;Dbxref=Genbank:WP_025470750.1;Name=WP_025470750.1;gbkey=CDS;product=transposase;protein_id=WP_025470750.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3034265 3034397 . + . ID=id569;gbkey=repeat_region NC_005810.1 RefSeq gene 3034466 3036043 . - . ID=gene2833;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YP_RS14215;old_locus_tag=YP2736%2CYP_2736 NC_005810.1 Protein Homology CDS 3034466 3036043 . - 0 ID=cds2774;Parent=gene2833;Dbxref=Genbank:WP_002209807.1;Name=WP_002209807.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_002209807.1;transl_table=11 NC_005810.1 RefSeq gene 3036026 3036151 . + . ID=gene2834;Name=YP_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14220 NC_005810.1 Protein Homology CDS 3036026 3036151 . + 0 ID=cds2775;Parent=gene2834;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11 NC_005810.1 RefSeq gene 3036223 3037686 . - . ID=gene2835;Name=YP_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14225;old_locus_tag=YP2737%2CYP_2737 NC_005810.1 Protein Homology CDS 3036223 3037686 . - 0 ID=cds2776;Parent=gene2835;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NC_005810.1 RefSeq gene 3037856 3039235 . + . ID=gene2836;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YP_RS14230;old_locus_tag=YP2738%2CYP_2738 NC_005810.1 Protein Homology CDS 3037856 3039235 . + 0 ID=cds2777;Parent=gene2836;Dbxref=Genbank:WP_002209810.1;Name=WP_002209810.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_002209810.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3039223 3039254 . + . ID=id570;gbkey=repeat_region;gene=xseA NC_005810.1 RefSeq gene 3039344 3039568 . - . ID=gene2837;Name=YP_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14235;old_locus_tag=YP2739%2CYP_2739 NC_005810.1 Protein Homology CDS 3039344 3039568 . - 0 ID=cds2778;Parent=gene2837;Dbxref=Genbank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209811.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3039581 3039620 . + . ID=id571;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3039617 3040573 . - . ID=gene2838;Name=YP_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14240;old_locus_tag=YP2740%2CYP_2740 NC_005810.1 Protein Homology CDS 3039617 3040573 . - 0 ID=cds2779;Parent=gene2838;Dbxref=Genbank:WP_002209812.1;Name=WP_002209812.1;gbkey=CDS;product=transporter;protein_id=WP_002209812.1;transl_table=11 NC_005810.1 RefSeq gene 3040920 3042407 . - . ID=gene2839;Name=YP_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14245;old_locus_tag=YP2741%2CYP_2741 NC_005810.1 Protein Homology CDS 3040920 3042407 . - 0 ID=cds2780;Parent=gene2839;Dbxref=Genbank:WP_002209813.1;Name=WP_002209813.1;gbkey=CDS;product=GTPase Der;protein_id=WP_002209813.1;transl_table=11 NC_005810.1 RefSeq gene 3042555 3043736 . - . ID=gene2840;Name=YP_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14250;old_locus_tag=YP2742%2CYP_2742 NC_005810.1 Protein Homology CDS 3042555 3043736 . - 0 ID=cds2781;Parent=gene2840;Dbxref=Genbank:WP_002209814.1;Name=WP_002209814.1;gbkey=CDS;product=outer membrane protein assembly factor BamB;protein_id=WP_002209814.1;transl_table=11 NC_005810.1 RefSeq gene 3043748 3044383 . - . ID=gene2841;Name=YP_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14255;old_locus_tag=YP2743%2CYP_2743 NC_005810.1 Protein Homology CDS 3043748 3044383 . - 0 ID=cds2782;Parent=gene2841;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11 NC_005810.1 RefSeq gene 3044397 3045671 . - . ID=gene2842;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YP_RS14260;old_locus_tag=YP2744%2CYP_2744 NC_005810.1 Protein Homology CDS 3044397 3045671 . - 0 ID=cds2783;Parent=gene2842;Dbxref=Genbank:WP_002209816.1;Name=WP_002209816.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_002209816.1;transl_table=11 NC_005810.1 RefSeq gene 3045880 3047007 . - . ID=gene2843;Name=YP_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14265;old_locus_tag=YP2745%2CYP_2745 NC_005810.1 Protein Homology CDS 3045880 3047007 . - 0 ID=cds2784;Parent=gene2843;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11 NC_005810.1 RefSeq gene 3047069 3048106 . - . ID=gene2844;Name=YP_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14270;old_locus_tag=YP2746%2CYP_2746 NC_005810.1 Protein Homology CDS 3047069 3048106 . - 0 ID=cds2785;Parent=gene2844;Dbxref=Genbank:WP_002209818.1;Name=WP_002209818.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_002209818.1;transl_table=11 NC_005810.1 RefSeq gene 3048096 3048845 . - . ID=gene2845;Name=YP_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14275;old_locus_tag=YP2747%2CYP_2747 NC_005810.1 Protein Homology CDS 3048096 3048845 . - 0 ID=cds2786;Parent=gene2845;Dbxref=Genbank:WP_002209819.1;Name=WP_002209819.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_002209819.1;transl_table=11 NC_005810.1 RefSeq gene 3048999 3050195 . - . ID=gene2846;Name=YP_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14280;old_locus_tag=YP2748%2CYP_2748 NC_005810.1 Protein Homology CDS 3048999 3050195 . - 0 ID=cds2787;Parent=gene2846;Dbxref=Genbank:WP_002209820.1;Name=WP_002209820.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002209820.1;transl_table=11 NC_005810.1 RefSeq gene 3050457 3050885 . - . ID=gene2847;Name=YP_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14285;old_locus_tag=YP2749%2CYP_2749 NC_005810.1 Protein Homology CDS 3050457 3050885 . - 0 ID=cds2788;Parent=gene2847;Dbxref=Genbank:WP_002209821.1;Name=WP_002209821.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_002209821.1;transl_table=11 NC_005810.1 RefSeq gene 3051212 3053632 . - . ID=gene2848;Name=YP_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14290;old_locus_tag=YP2750%2CYP_2750 NC_005810.1 Protein Homology CDS 3051212 3053632 . - 0 ID=cds2789;Parent=gene2848;Dbxref=Genbank:WP_002215515.1;Name=WP_002215515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215515.1;transl_table=11 NC_005810.1 RefSeq gene 3053807 3054064 . + . ID=gene2849;Name=YP_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14295;old_locus_tag=YP2751%2CYP_2751 NC_005810.1 Protein Homology CDS 3053807 3054064 . + 0 ID=cds2790;Parent=gene2849;Dbxref=Genbank:WP_002215513.1;Name=WP_002215513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215513.1;transl_table=11 NC_005810.1 RefSeq gene 3054348 3058832 . + . ID=gene2850;Name=YP_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14300;old_locus_tag=YP2752%2CYP_2752 NC_005810.1 Protein Homology CDS 3054348 3058832 . + 0 ID=cds2791;Parent=gene2850;Dbxref=Genbank:WP_011171911.1;Name=WP_011171911.1;gbkey=CDS;product=autotransporter;protein_id=WP_011171911.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3056406 3057053 . + . ID=id572;Note=degenerate repeat region containing 4 copies of a 162bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3057533 3057562 . + . ID=id573;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3059390 3060154 . + . ID=gene2851;Name=YP_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14305;old_locus_tag=YP2753 NC_005810.1 Protein Homology CDS 3059390 3060154 . + 0 ID=cds2792;Parent=gene2851;Dbxref=Genbank:WP_041175918.1;Name=WP_041175918.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_041175918.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3060081 3061398 . + . ID=id574;gbkey=repeat_region NC_005810.1 RefSeq region 3060082 3061396 . - . ID=id575;gbkey=mobile_element NC_005810.1 RefSeq gene 3060117 3061325 . - . ID=gene2852;Name=YP_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14310;old_locus_tag=YP2754%2CYP_2754 NC_005810.1 Protein Homology CDS 3060117 3061325 . - 0 ID=cds2793;Parent=gene2852;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 3061350 3062540 . + . ID=gene2853;Name=YP_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14315;old_locus_tag=YP2755 NC_005810.1 Protein Homology CDS 3061350 3062540 . + 0 ID=cds2794;Parent=gene2853;Dbxref=Genbank:WP_002211577.1;Name=WP_002211577.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002211577.1;transl_table=11 NC_005810.1 RefSeq gene 3062525 3063133 . + . ID=gene2854;Name=YP_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14320;old_locus_tag=YP2756%2CYP_2756 NC_005810.1 Protein Homology CDS 3062525 3063133 . + 0 ID=cds2795;Parent=gene2854;Dbxref=Genbank:WP_002211576.1;Name=WP_002211576.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211576.1;transl_table=11 NC_005810.1 RefSeq gene 3063238 3063762 . + . ID=gene2855;Name=YP_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14325;old_locus_tag=YP2757%2CYP_2757 NC_005810.1 Protein Homology CDS 3063238 3063762 . + 0 ID=cds2796;Parent=gene2855;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11 NC_005810.1 RefSeq gene 3063786 3065288 . + . ID=gene2856;Name=YP_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14330;old_locus_tag=YP2758%2CYP_2758 NC_005810.1 Protein Homology CDS 3063786 3065288 . + 0 ID=cds2797;Parent=gene2856;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11 NC_005810.1 RefSeq gene 3065614 3066099 . + . ID=gene2857;Name=YP_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14335;old_locus_tag=YP2759%2CYP_2759 NC_005810.1 Protein Homology CDS 3065614 3066099 . + 0 ID=cds2798;Parent=gene2857;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3066335 3066376 . + . ID=id576;Note=exact repeat region containing 2 copies of a 21 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3066373 3066912 . + . ID=gene2858;Name=YP_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14340;old_locus_tag=YP2760%2CYP_2760 NC_005810.1 Protein Homology CDS 3066373 3066912 . + 0 ID=cds2799;Parent=gene2858;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11 NC_005810.1 RefSeq gene 3066916 3068265 . + . ID=gene2859;Name=YP_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14345;old_locus_tag=YP2761%2CYP_2761 NC_005810.1 Protein Homology CDS 3066916 3068265 . + 0 ID=cds2800;Parent=gene2859;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11 NC_005810.1 RefSeq gene 3068262 3068930 . + . ID=gene2860;Name=YP_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14350;old_locus_tag=YP2762 NC_005810.1 Protein Homology CDS 3068262 3068930 . + 0 ID=cds2801;Parent=gene2860;Dbxref=Genbank:WP_002215165.1;Name=WP_002215165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215165.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3068854 3070813 . + . ID=id577;gbkey=repeat_region NC_005810.1 RefSeq region 3068858 3070810 . + . ID=id578;gbkey=mobile_element NC_005810.1 RefSeq gene 3068944 3069966 . + . ID=gene2861;Name=YP_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14355;old_locus_tag=YP2763%2CYP_2763 NC_005810.1 Protein Homology CDS 3068944 3069966 . + 0 ID=cds2802;Parent=gene2861;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 3069966 3070745 . + . ID=gene2862;Name=YP_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14360;old_locus_tag=YP2764%2CYP_2764 NC_005810.1 Protein Homology CDS 3069966 3070745 . + 0 ID=cds2803;Parent=gene2862;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 3070796 3071029 . - . ID=gene2863;Name=YP_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14365;old_locus_tag=YP2765 NC_005810.1 Protein Homology CDS 3070796 3071029 . - 0 ID=cds2804;Parent=gene2863;Dbxref=Genbank:WP_002210703.1;Name=WP_002210703.1;gbkey=CDS;product=polysaccharide deacetylase;protein_id=WP_002210703.1;transl_table=11 NC_005810.1 RefSeq gene 3071022 3071144 . - . ID=gene2864;Name=YP_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14370 NC_005810.1 Protein Homology CDS 3071022 3071144 . - 0 ID=cds2805;Parent=gene2864;Dbxref=Genbank:WP_002210702.1;Name=WP_002210702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210702.1;transl_table=11 NC_005810.1 RefSeq gene 3071368 3072852 . + . ID=gene2865;Name=YP_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14375;old_locus_tag=YP2766%2CYP_2766 NC_005810.1 Protein Homology CDS 3071368 3072852 . + 0 ID=cds2806;Parent=gene2865;Dbxref=Genbank:WP_002210701.1;Name=WP_002210701.1;gbkey=CDS;product=permease;protein_id=WP_002210701.1;transl_table=11 NC_005810.1 RefSeq gene 3072909 3072985 . - . ID=gene2866;Name=YP_RS14380;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS14380;old_locus_tag=tRNA-Asp_1%2CYP_t47 NC_005810.1 tRNAscan-SE tRNA 3072909 3072985 . - . ID=rna54;Parent=gene2866;anticodon=(pos:complement(3072949..3072951));gbkey=tRNA;product=tRNA-Asp NC_005810.1 tRNAscan-SE exon 3072909 3072985 . - . ID=id579;Parent=rna54;anticodon=(pos:complement(3072949..3072951));gbkey=tRNA;product=tRNA-Asp NC_005810.1 RefSeq gene 3073098 3073862 . - . ID=gene2867;Name=YP_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14385;old_locus_tag=YP2767%2CYP_2767 NC_005810.1 Protein Homology CDS 3073098 3073862 . - 0 ID=cds2807;Parent=gene2867;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NC_005810.1 RefSeq gene 3073932 3074396 . + . ID=gene2868;Name=YP_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14390;old_locus_tag=YP2768%2CYP_2768 NC_005810.1 Protein Homology CDS 3073932 3074396 . + 0 ID=cds2808;Parent=gene2868;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NC_005810.1 RefSeq gene 3074451 3075170 . - . ID=gene2869;Name=YP_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14395;old_locus_tag=YP2769%2CYP_2769 NC_005810.1 Protein Homology CDS 3074451 3075170 . - 0 ID=cds2809;Parent=gene2869;Dbxref=Genbank:WP_002210698.1;Name=WP_002210698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210698.1;transl_table=11 NC_005810.1 RefSeq gene 3075215 3075970 . + . ID=gene2870;Name=YP_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14400;old_locus_tag=YP2770%2CYP_2770 NC_005810.1 Protein Homology CDS 3075215 3075970 . + 0 ID=cds2810;Parent=gene2870;Dbxref=Genbank:WP_002210697.1;Name=WP_002210697.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_002210697.1;transl_table=11 NC_005810.1 RefSeq gene 3076042 3077430 . + . ID=gene2871;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=YP_RS14405;old_locus_tag=YP2771%2CYP_2771 NC_005810.1 Protein Homology CDS 3076042 3077430 . + 0 ID=cds2811;Parent=gene2871;Dbxref=Genbank:WP_002228041.1;Name=WP_002228041.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_002228041.1;transl_table=11 NC_005810.1 RefSeq gene 3077473 3078234 . - . ID=gene2872;Name=YP_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14410;old_locus_tag=YP2772%2CYP_2772 NC_005810.1 Protein Homology CDS 3077473 3078234 . - 0 ID=cds2812;Parent=gene2872;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11 NC_005810.1 RefSeq gene 3078619 3079065 . - . ID=gene2873;Name=YP_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14415;old_locus_tag=YP2773%2CYP_2773 NC_005810.1 Protein Homology CDS 3078619 3079065 . - 0 ID=cds2813;Parent=gene2873;Dbxref=Genbank:WP_002210694.1;Name=WP_002210694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210694.1;transl_table=11 NC_005810.1 RefSeq gene 3079118 3079921 . - . ID=gene2874;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YP_RS14420;old_locus_tag=YP2774%2CYP_2774 NC_005810.1 Protein Homology CDS 3079118 3079921 . - 0 ID=cds2814;Parent=gene2874;Dbxref=Genbank:WP_002210693.1;Name=WP_002210693.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase B;protein_id=WP_002210693.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3080279 3085896 . + . ID=id580;gbkey=repeat_region NC_005810.1 RefSeq gene 3080280 3080356 . - . ID=gene2875;Name=YP_RS14425;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS14425;old_locus_tag=tRNA-Asp_2%2CYP_t48 NC_005810.1 tRNAscan-SE tRNA 3080280 3080356 . - . ID=rna55;Parent=gene2875;anticodon=(pos:complement(3080320..3080322));gbkey=tRNA;product=tRNA-Asp NC_005810.1 tRNAscan-SE exon 3080280 3080356 . - . ID=id581;Parent=rna55;anticodon=(pos:complement(3080320..3080322));gbkey=tRNA;product=tRNA-Asp NC_005810.1 RefSeq gene 3080482 3080597 . - . ID=gene2876;Name=YP_RS14430;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS14430 NC_005810.1 cmsearch rRNA 3080482 3080597 . - . ID=rna56;Parent=gene2876;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 3080482 3080597 . - . ID=id582;Parent=rna56;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq gene 3080689 3083622 . - . ID=gene2877;Name=YP_RS14435;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS14435;old_locus_tag=23S_rRNA_4%2CYP_r11 NC_005810.1 RefSeq rRNA 3080689 3083622 . - . ID=rna57;Parent=gene2877;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq exon 3080689 3083622 . - . ID=id583;Parent=rna57;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq gene 3083866 3083941 . - . ID=gene2878;Name=YP_RS14440;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS14440;old_locus_tag=tRNA-Glu_2%2CYP_t49 NC_005810.1 tRNAscan-SE tRNA 3083866 3083941 . - . ID=rna58;Parent=gene2878;anticodon=(pos:complement(3083905..3083907));gbkey=tRNA;product=tRNA-Glu NC_005810.1 tRNAscan-SE exon 3083866 3083941 . - . ID=id584;Parent=rna58;anticodon=(pos:complement(3083905..3083907));gbkey=tRNA;product=tRNA-Glu NC_005810.1 RefSeq gene 3084075 3085623 . - . ID=gene2879;Name=YP_RS14445;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS14445;old_locus_tag=16S_rRNA_4%2CYP_r12 NC_005810.1 RefSeq rRNA 3084075 3085623 . - . ID=rna59;Parent=gene2879;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq exon 3084075 3085623 . - . ID=id585;Parent=rna59;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq gene 3086062 3086628 . - . ID=gene2880;Name=YP_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14455;old_locus_tag=YP2775%2CYP_2775 NC_005810.1 Protein Homology CDS 3086062 3086628 . - 0 ID=cds2815;Parent=gene2880;Dbxref=Genbank:WP_002220062.1;Name=WP_002220062.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 NC_005810.1 RefSeq gene 3086815 3087846 . + . ID=gene2881;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=YP_RS14460;old_locus_tag=YP2776%2CYP_2776 NC_005810.1 Protein Homology CDS 3086815 3087846 . + 0 ID=cds2816;Parent=gene2881;Dbxref=Genbank:WP_002212161.1;Name=WP_002212161.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002212161.1;transl_table=11 NC_005810.1 RefSeq gene 3087839 3088492 . + . ID=gene2882;Name=YP_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14465;old_locus_tag=YP2777%2CYP_2777 NC_005810.1 Protein Homology CDS 3087839 3088492 . + 0 ID=cds2817;Parent=gene2882;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11 NC_005810.1 RefSeq gene 3088556 3089371 . + . ID=gene2883;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=YP_RS14470;old_locus_tag=YP2778%2CYP_2778 NC_005810.1 Protein Homology CDS 3088556 3089371 . + 0 ID=cds2818;Parent=gene2883;Dbxref=Genbank:WP_002212159.1;Name=WP_002212159.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_002212159.1;transl_table=11 NC_005810.1 RefSeq gene 3089489 3089896 . + . ID=gene2884;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YP_RS14475;old_locus_tag=YP2779%2CYP_2779 NC_005810.1 Protein Homology CDS 3089489 3089896 . + 0 ID=cds2819;Parent=gene2884;Dbxref=Genbank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_002212158.1;transl_table=11 NC_005810.1 RefSeq gene 3089893 3090600 . + . ID=gene2885;Name=YP_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14480;old_locus_tag=YP2780%2CYP_2780 NC_005810.1 Protein Homology CDS 3089893 3090600 . + 0 ID=cds2820;Parent=gene2885;Dbxref=Genbank:WP_002212157.1;Name=WP_002212157.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_002212157.1;transl_table=11 NC_005810.1 RefSeq gene 3090704 3092422 . + . ID=gene2886;Name=YP_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14485;old_locus_tag=YP2781%2CYP_2781 NC_005810.1 Protein Homology CDS 3090704 3092422 . + 0 ID=cds2821;Parent=gene2886;Dbxref=Genbank:WP_002212156.1;Name=WP_002212156.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_002212156.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3092431 3092468 . + . ID=id586;Note=degenerate repeat region containing 2 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3092556 3093239 . - . ID=gene2887;Name=YP_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14490;old_locus_tag=YP2782%2CYP_2782 NC_005810.1 Protein Homology CDS 3092556 3093239 . - 0 ID=cds2822;Parent=gene2887;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11 NC_005810.1 RefSeq gene 3093324 3093740 . - . ID=gene2888;Name=YP_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14495;old_locus_tag=YP2783%2CYP_2783 NC_005810.1 Protein Homology CDS 3093324 3093740 . - 0 ID=cds2823;Parent=gene2888;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11 NC_005810.1 RefSeq gene 3093743 3094291 . - . ID=gene2889;Name=YP_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14500;old_locus_tag=YP2784%2CYP_2784 NC_005810.1 Protein Homology CDS 3093743 3094291 . - 0 ID=cds2824;Parent=gene2889;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11 NC_005810.1 RefSeq gene 3094533 3094733 . + . ID=gene2890;Name=YP_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14505;old_locus_tag=YP2785%2CYP_2785 NC_005810.1 Protein Homology CDS 3094533 3094733 . + 0 ID=cds2825;Parent=gene2890;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11 NC_005810.1 RefSeq gene 3094720 3094980 . + . ID=gene2891;Name=YP_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14510;old_locus_tag=YP2786%2CYP_2786 NC_005810.1 Protein Homology CDS 3094720 3094980 . + 0 ID=cds2826;Parent=gene2891;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NC_005810.1 RefSeq gene 3095245 3095562 . - . ID=gene2892;Name=YP_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14515;old_locus_tag=YP2787%2CYP_2787 NC_005810.1 Protein Homology CDS 3095245 3095562 . - 0 ID=cds2827;Parent=gene2892;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11 NC_005810.1 RefSeq gene 3095799 3097181 . - . ID=gene2893;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YP_RS14520;old_locus_tag=YP2788%2CYP_2788 NC_005810.1 Protein Homology CDS 3095799 3097181 . - 0 ID=cds2828;Parent=gene2893;Dbxref=Genbank:WP_002212149.1;Name=WP_002212149.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_002212149.1;transl_table=11 NC_005810.1 RefSeq gene 3097183 3097581 . - . ID=gene2894;Name=YP_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14525;old_locus_tag=YP2789%2CYP_2789 NC_005810.1 Protein Homology CDS 3097183 3097581 . - 0 ID=cds2829;Parent=gene2894;Dbxref=Genbank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;product=lyase;protein_id=WP_002212148.1;transl_table=11 NC_005810.1 RefSeq gene 3097765 3098724 . - . ID=gene2895;Name=YP_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14530;old_locus_tag=YP2790%2CYP_2790 NC_005810.1 Protein Homology CDS 3097765 3098724 . - 0 ID=cds2830;Parent=gene2895;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NC_005810.1 RefSeq gene 3098737 3102219 . - . ID=gene2896;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YP_RS14535;old_locus_tag=YP2791%2CYP_2791 NC_005810.1 Protein Homology CDS 3098737 3102219 . - 0 ID=cds2831;Parent=gene2896;Dbxref=Genbank:WP_002228634.1;Name=WP_002228634.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_002228634.1;transl_table=11 NC_005810.1 RefSeq gene 3102382 3102978 . - . ID=gene2897;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YP_RS14540;old_locus_tag=YP2792%2CYP_2792 NC_005810.1 Protein Homology CDS 3102382 3102978 . - 0 ID=cds2832;Parent=gene2897;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NC_005810.1 RefSeq gene 3102975 3104159 . - . ID=gene2898;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YP_RS14545;old_locus_tag=YP2793%2CYP_2793 NC_005810.1 Protein Homology CDS 3102975 3104159 . - 0 ID=cds2833;Parent=gene2898;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NC_005810.1 RefSeq gene 3104163 3104951 . - . ID=gene2899;Name=YP_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14550;old_locus_tag=YP2794%2CYP_2794 NC_005810.1 Protein Homology CDS 3104163 3104951 . - 0 ID=cds2834;Parent=gene2899;Dbxref=Genbank:WP_002212143.1;Name=WP_002212143.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NC_005810.1 RefSeq gene 3104955 3105485 . - . ID=gene2900;Name=YP_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14555;old_locus_tag=YP2795%2CYP_2795 NC_005810.1 Protein Homology CDS 3104955 3105485 . - 0 ID=cds2835;Parent=gene2900;Dbxref=Genbank:WP_002217656.1;Name=WP_002217656.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002217656.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3104977 3105006 . + . ID=id587;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3105643 3106665 . - . ID=gene2901;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YP_RS14560;old_locus_tag=YP2796%2CYP_2796 NC_005810.1 Protein Homology CDS 3105643 3106665 . - 0 ID=cds2836;Parent=gene2901;Dbxref=Genbank:WP_002230670.1;Name=WP_002230670.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase;protein_id=WP_002230670.1;transl_table=11 NC_005810.1 RefSeq gene 3106669 3107166 . - . ID=gene2902;Name=YP_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14565;old_locus_tag=YP2797%2CYP_2797 NC_005810.1 Protein Homology CDS 3106669 3107166 . - 0 ID=cds2837;Parent=gene2902;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11 NC_005810.1 RefSeq gene 3107324 3109711 . - . ID=gene2903;Name=YP_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14570;old_locus_tag=YP2798%2CYP_2798 NC_005810.1 Protein Homology CDS 3107324 3109711 . - 0 ID=cds2838;Parent=gene2903;Dbxref=Genbank:WP_002212139.1;Name=WP_002212139.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NC_005810.1 RefSeq gene 3109748 3111103 . - . ID=gene2904;Name=YP_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14575;old_locus_tag=YP2799%2CYP_2799 NC_005810.1 Protein Homology CDS 3109748 3111103 . - 0 ID=cds2839;Parent=gene2904;Dbxref=Genbank:WP_002212138.1;Name=WP_002212138.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=protease RseP;protein_id=WP_002212138.1;transl_table=11 NC_005810.1 RefSeq gene 3111132 3111980 . - . ID=gene2905;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YP_RS14580;old_locus_tag=YP2800%2CYP_2800 NC_005810.1 Protein Homology CDS 3111132 3111980 . - 0 ID=cds2840;Parent=gene2905;Dbxref=Genbank:WP_002212137.1;Name=WP_002212137.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_002212137.1;transl_table=11 NC_005810.1 RefSeq gene 3111990 3112748 . - . ID=gene2906;Name=YP_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14585;old_locus_tag=YP2801%2CYP_2801 NC_005810.1 Protein Homology CDS 3111990 3112748 . - 0 ID=cds2841;Parent=gene2906;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11 NC_005810.1 RefSeq gene 3112972 3114168 . - . ID=gene2907;Name=YP_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14590;old_locus_tag=YP2802%2CYP_2802 NC_005810.1 Protein Homology CDS 3112972 3114168 . - 0 ID=cds2842;Parent=gene2907;Dbxref=Genbank:WP_002212135.1;Name=WP_002212135.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3114282 3114313 . + . ID=id588;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3114382 3114939 . - . ID=gene2908;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YP_RS14595;old_locus_tag=YP2804%2CYP_2804 NC_005810.1 Protein Homology CDS 3114382 3114939 . - 0 ID=cds2843;Parent=gene2908;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11 NC_005810.1 RefSeq gene 3115075 3115800 . - . ID=gene2909;Name=YP_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14600;old_locus_tag=YP2805%2CYP_2805 NC_005810.1 Protein Homology CDS 3115075 3115800 . - 0 ID=cds2844;Parent=gene2909;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11 NC_005810.1 RefSeq gene 3116009 3116866 . - . ID=gene2910;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YP_RS14605;old_locus_tag=YP2806%2CYP_2806 NC_005810.1 Protein Homology CDS 3116009 3116866 . - 0 ID=cds2845;Parent=gene2910;Dbxref=Genbank:WP_002212132.1;Name=WP_002212132.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NC_005810.1 RefSeq gene 3116994 3117719 . - . ID=gene2911;Name=YP_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14610;old_locus_tag=YP2807%2CYP_2807 NC_005810.1 Protein Homology CDS 3116994 3117719 . - 0 ID=cds2846;Parent=gene2911;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NC_005810.1 RefSeq gene 3118154 3118945 . + . ID=gene2912;Name=YP_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14615;old_locus_tag=YP2808%2CYP_2808 NC_005810.1 Protein Homology CDS 3118154 3118945 . + 0 ID=cds2847;Parent=gene2912;Dbxref=Genbank:WP_002212130.1;Name=WP_002212130.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_002212130.1;transl_table=11 NC_005810.1 RefSeq gene 3119005 3121686 . + . ID=gene2913;Name=YP_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14620;old_locus_tag=YP2809%2CYP_2809 NC_005810.1 Protein Homology CDS 3119005 3121686 . + 0 ID=cds2848;Parent=gene2913;Dbxref=Genbank:WP_002212129.1;Name=WP_002212129.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_002212129.1;transl_table=11 NC_005810.1 RefSeq gene 3121861 3122685 . + . ID=gene2914;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YP_RS14625;old_locus_tag=YP2810%2CYP_2810 NC_005810.1 Protein Homology CDS 3121861 3122685 . + 0 ID=cds2849;Parent=gene2914;Dbxref=Genbank:WP_002212128.1;Name=WP_002212128.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NC_005810.1 RefSeq gene 3122809 3123198 . + . ID=gene2915;Name=YP_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14630;old_locus_tag=YP2811%2CYP_2811 NC_005810.1 Protein Homology CDS 3122809 3123198 . + 0 ID=cds2850;Parent=gene2915;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11 NC_005810.1 RefSeq gene 3123288 3123737 . - . ID=gene2916;Name=YP_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14635;old_locus_tag=YP2812%2CYP_2812 NC_005810.1 Protein Homology CDS 3123288 3123737 . - 0 ID=cds2851;Parent=gene2916;Dbxref=Genbank:WP_002212126.1;Name=WP_002212126.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002212126.1;transl_table=11 NC_005810.1 RefSeq gene 3123765 3124538 . - . ID=gene2917;Name=YP_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14640;old_locus_tag=YP2813%2CYP_2813 NC_005810.1 Protein Homology CDS 3123765 3124538 . - 0 ID=cds2852;Parent=gene2917;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11 NC_005810.1 RefSeq gene 3124538 3124870 . - . ID=gene2918;Name=YP_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14645;old_locus_tag=YP2814 NC_005810.1 Protein Homology CDS 3124538 3124870 . - 0 ID=cds2853;Parent=gene2918;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3125013 3125734 . + . ID=id589;gbkey=repeat_region NC_005810.1 RefSeq region 3125016 3125727 . - . ID=id590;gbkey=mobile_element NC_005810.1 RefSeq gene 3125124 3125582 . - . ID=gene2919;Name=YP_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14650;old_locus_tag=YP2815%2CYP_2815 NC_005810.1 Protein Homology CDS 3125124 3125582 . - 0 ID=cds2854;Parent=gene2919;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 3126272 3126823 . - . ID=gene2920;Name=YP_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14655;old_locus_tag=YP2816%2CYP_2816 NC_005810.1 Protein Homology CDS 3126272 3126823 . - 0 ID=cds2855;Parent=gene2920;Dbxref=Genbank:WP_002212123.1;Name=WP_002212123.1;gbkey=CDS;product=protein Syd;protein_id=WP_002212123.1;transl_table=11 NC_005810.1 RefSeq gene 3126955 3127800 . + . ID=gene2921;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YP_RS14660;old_locus_tag=YP2817%2CYP_2817 NC_005810.1 Protein Homology CDS 3126955 3127800 . + 0 ID=cds2856;Parent=gene2921;Dbxref=Genbank:WP_002212122.1;Name=WP_002212122.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_002212122.1;transl_table=11 NC_005810.1 RefSeq gene 3127953 3129317 . + . ID=gene2922;Name=YP_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14665;old_locus_tag=YP2818%2CYP_2818 NC_005810.1 Protein Homology CDS 3127953 3129317 . + 0 ID=cds2857;Parent=gene2922;Dbxref=Genbank:WP_002212121.1;Name=WP_002212121.1;gbkey=CDS;product=LOG family protein;protein_id=WP_002212121.1;transl_table=11 NC_005810.1 RefSeq gene 3129577 3130332 . + . ID=gene2923;Name=YP_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14670;old_locus_tag=YP2819%2CYP_2819 NC_005810.1 Protein Homology CDS 3129577 3130332 . + 0 ID=cds2858;Parent=gene2923;Dbxref=Genbank:WP_002215970.1;Name=WP_002215970.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_002215970.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3130364 3130542 . + . ID=id591;gbkey=repeat_region NC_005810.1 RefSeq gene 3130583 3131689 . - . ID=gene2924;Name=YP_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14675;old_locus_tag=YP2820%2CYP_2820 NC_005810.1 Protein Homology CDS 3130583 3131689 . - 0 ID=cds2859;Parent=gene2924;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11 NC_005810.1 RefSeq gene 3131682 3132062 . - . ID=gene2925;Name=YP_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14680;old_locus_tag=YP2821%2CYP_2821 NC_005810.1 Protein Homology CDS 3131682 3132062 . - 0 ID=cds2860;Parent=gene2925;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11 NC_005810.1 RefSeq gene 3132243 3133160 . - . ID=gene2926;Name=YP_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14685;old_locus_tag=YP2822%2CYP_2822 NC_005810.1 Protein Homology CDS 3132243 3133160 . - 0 ID=cds2861;Parent=gene2926;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11 NC_005810.1 RefSeq gene 3133820 3135025 . + . ID=gene2927;Name=YP_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14690;old_locus_tag=YP2823%2CYP_2823 NC_005810.1 Protein Homology CDS 3133820 3135025 . + 0 ID=cds2862;Parent=gene2927;Dbxref=Genbank:WP_002212116.1;Name=WP_002212116.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_002212116.1;transl_table=11 NC_005810.1 RefSeq gene 3135160 3135603 . + . ID=gene2928;Name=YP_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14695;old_locus_tag=YP2824%2CYP_2824 NC_005810.1 Protein Homology CDS 3135160 3135603 . + 0 ID=cds2863;Parent=gene2928;Dbxref=Genbank:WP_002212115.1;Name=WP_002212115.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_002212115.1;transl_table=11 NC_005810.1 RefSeq gene 3135639 3136466 . - . ID=gene2929;Name=YP_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14700;old_locus_tag=YP2825%2CYP_2825 NC_005810.1 Protein Homology CDS 3135639 3136466 . - 0 ID=cds2864;Parent=gene2929;Dbxref=Genbank:WP_002212114.1;Name=WP_002212114.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_002212114.1;transl_table=11 NC_005810.1 RefSeq gene 3136609 3137781 . - . ID=gene2930;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YP_RS14705;old_locus_tag=YP2826%2CYP_2826 NC_005810.1 Protein Homology CDS 3136609 3137781 . - 0 ID=cds2865;Parent=gene2930;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11 NC_005810.1 RefSeq gene 3137997 3138073 . + . ID=gene2931;Name=YP_RS14710;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS14710;old_locus_tag=tRNA-Met_4%2CYP_t50 NC_005810.1 tRNAscan-SE tRNA 3137997 3138073 . + . ID=rna60;Parent=gene2931;anticodon=(pos:3138031..3138033);gbkey=tRNA;product=tRNA-Met NC_005810.1 tRNAscan-SE exon 3137997 3138073 . + . ID=id592;Parent=rna60;anticodon=(pos:3138031..3138033);gbkey=tRNA;product=tRNA-Met NC_005810.1 RefSeq gene 3138197 3138273 . + . ID=gene2932;Name=YP_RS14715;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS14715;old_locus_tag=tRNA-Met_5%2CYP_t51 NC_005810.1 tRNAscan-SE tRNA 3138197 3138273 . + . ID=rna61;Parent=gene2932;anticodon=(pos:3138231..3138233);gbkey=tRNA;product=tRNA-Met NC_005810.1 tRNAscan-SE exon 3138197 3138273 . + . ID=id593;Parent=rna61;anticodon=(pos:3138231..3138233);gbkey=tRNA;product=tRNA-Met NC_005810.1 RefSeq gene 3138503 3139753 . - . ID=gene2933;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YP_RS14720;old_locus_tag=YP2827%2CYP_2827 NC_005810.1 Protein Homology CDS 3138503 3139753 . - 0 ID=cds2866;Parent=gene2933;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11 NC_005810.1 RefSeq gene 3139989 3141338 . + . ID=gene2934;Name=YP_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14725;old_locus_tag=YP2828%2CYP_2828 NC_005810.1 Protein Homology CDS 3139989 3141338 . + 0 ID=cds2867;Parent=gene2934;Dbxref=Genbank:WP_011171914.1;Name=WP_011171914.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=N-acetylglutamate synthase;protein_id=WP_011171914.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3141275 3143440 . + . ID=id594;gbkey=repeat_region NC_005810.1 RefSeq region 3141279 3143231 . + . ID=id595;gbkey=mobile_element NC_005810.1 RefSeq gene 3141365 3142387 . + . ID=gene2935;Name=YP_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14730;old_locus_tag=YP2829%2CYP_2829 NC_005810.1 Protein Homology CDS 3141365 3142387 . + 0 ID=cds2868;Parent=gene2935;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 3142387 3143166 . + . ID=gene2936;Name=YP_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14735;old_locus_tag=YP2830%2CYP_2830 NC_005810.1 Protein Homology CDS 3142387 3143166 . + 0 ID=cds2869;Parent=gene2936;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq region 3143231 3143436 . - . ID=id596;Note=partial element;gbkey=mobile_element NC_005810.1 RefSeq gene 3143511 3146624 . - . ID=gene2937;Name=YP_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14740;old_locus_tag=YP2832%2CYP_2832 NC_005810.1 Protein Homology CDS 3143511 3146624 . - 0 ID=cds2870;Parent=gene2937;Dbxref=Genbank:WP_011171915.1;Name=WP_011171915.1;gbkey=CDS;product=chondroitin ABC lyase;protein_id=WP_011171915.1;transl_table=11 NC_005810.1 RefSeq gene 3146694 3148880 . - . ID=gene2938;Name=YP_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14745;old_locus_tag=YP2833%2CYP_2833 NC_005810.1 Protein Homology CDS 3146694 3148880 . - 0 ID=cds2871;Parent=gene2938;Dbxref=Genbank:WP_002209869.1;Name=WP_002209869.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209869.1;transl_table=11 NC_005810.1 RefSeq gene 3148995 3149945 . - . ID=gene2939;Name=YP_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14750;old_locus_tag=YP2834%2CYP_2834 NC_005810.1 Protein Homology CDS 3148995 3149945 . - 0 ID=cds2872;Parent=gene2939;Dbxref=Genbank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209868.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3149894 3149935 . + . ID=id597;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3149967 3150161 . - . ID=gene2940;Name=YP_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14755;old_locus_tag=YP2835%2CYP_2835 NC_005810.1 Protein Homology CDS 3149967 3150161 . - 0 ID=cds2873;Parent=gene2940;Dbxref=Genbank:WP_002214083.1;Name=WP_002214083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214083.1;transl_table=11 NC_005810.1 RefSeq gene 3150550 3150738 . - . ID=gene2941;Name=YP_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14760 NC_005810.1 Protein Homology CDS 3150550 3150738 . - 0 ID=cds2874;Parent=gene2941;Dbxref=Genbank:WP_002214085.1;Name=WP_002214085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214085.1;transl_table=11 NC_005810.1 RefSeq gene 3151234 3151989 . + . ID=gene2942;Name=YP_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14765;old_locus_tag=YP2837%2CYP_2837 NC_005810.1 Protein Homology CDS 3151234 3151989 . + 0 ID=cds2875;Parent=gene2942;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NC_005810.1 RefSeq gene 3152732 3153148 . + . ID=gene2943;Name=YP_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14770;old_locus_tag=YP2838%2CYP_2838 NC_005810.1 Protein Homology CDS 3152732 3153148 . + 0 ID=cds2876;Parent=gene2943;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11 NC_005810.1 RefSeq gene 3153318 3153719 . + . ID=gene2944;Name=YP_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14775;old_locus_tag=YP2839 NC_005810.1 Protein Homology CDS 3153318 3153719 . + 0 ID=cds2877;Parent=gene2944;Dbxref=Genbank:WP_002209865.1;Name=WP_002209865.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_002209865.1;transl_table=11 NC_005810.1 RefSeq gene 3153800 3155722 . + . ID=gene2945;Name=YP_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14780;old_locus_tag=YP2840%2CYP_2840 NC_005810.1 Protein Homology CDS 3153800 3155722 . + 0 ID=cds2878;Parent=gene2945;Dbxref=Genbank:WP_002220086.1;Name=WP_002220086.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_002220086.1;transl_table=11 NC_005810.1 RefSeq gene 3155719 3157230 . + . ID=gene2946;Name=YP_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14785;old_locus_tag=YP2841%2CYP_2841 NC_005810.1 Protein Homology CDS 3155719 3157230 . + 0 ID=cds2879;Parent=gene2946;Dbxref=Genbank:WP_002209863.1;Name=WP_002209863.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_002209863.1;transl_table=11 NC_005810.1 RefSeq gene 3157373 3158419 . + . ID=gene2947;Name=YP_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14790;old_locus_tag=YP2842%2CYP_2842 NC_005810.1 Protein Homology CDS 3157373 3158419 . + 0 ID=cds2880;Parent=gene2947;Dbxref=Genbank:WP_002229014.1;Name=WP_002229014.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_002229014.1;transl_table=11 NC_005810.1 RefSeq gene 3158439 3158876 . + . ID=gene2948;Name=YP_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14795;old_locus_tag=YP2843%2CYP_2843 NC_005810.1 Protein Homology CDS 3158439 3158876 . + 0 ID=cds2881;Parent=gene2948;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11 NC_005810.1 RefSeq gene 3158881 3159423 . + . ID=gene2949;Name=YP_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14800;old_locus_tag=YP2844%2CYP_2844 NC_005810.1 Protein Homology CDS 3158881 3159423 . + 0 ID=cds2882;Parent=gene2949;Dbxref=Genbank:WP_002214092.1;Name=WP_002214092.1;gbkey=CDS;product=general secretion pathway protein GspH;protein_id=WP_002214092.1;transl_table=11 NC_005810.1 RefSeq gene 3159515 3159805 . + . ID=gene2950;Name=YP_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14805;old_locus_tag=YP2845%2CYP_2845 NC_005810.1 Protein Homology CDS 3159515 3159805 . + 0 ID=cds2883;Parent=gene2950;Dbxref=Genbank:WP_002214093.1;Name=WP_002214093.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_002214093.1;transl_table=11 NC_005810.1 RefSeq gene 3159798 3160394 . + . ID=gene2951;Name=YP_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14810;old_locus_tag=YP2846%2CYP_2846 NC_005810.1 Protein Homology CDS 3159798 3160394 . + 0 ID=cds2884;Parent=gene2951;Dbxref=Genbank:WP_002209860.1;Name=WP_002209860.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_002209860.1;transl_table=11 NC_005810.1 RefSeq gene 3160463 3161359 . + . ID=gene2952;Name=YP_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14815;old_locus_tag=YP2847%2CYP_2847 NC_005810.1 Protein Homology CDS 3160463 3161359 . + 0 ID=cds2885;Parent=gene2952;Dbxref=Genbank:WP_002209859.1;Name=WP_002209859.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_002209859.1;transl_table=11 NC_005810.1 RefSeq gene 3161343 3162533 . + . ID=gene2953;Name=YP_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14820;old_locus_tag=YP2848%2CYP_2848 NC_005810.1 Protein Homology CDS 3161343 3162533 . + 0 ID=cds2886;Parent=gene2953;Dbxref=Genbank:WP_002209858.1;Name=WP_002209858.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_002209858.1;transl_table=11 NC_005810.1 RefSeq gene 3162542 3162991 . + . ID=gene2954;Name=YP_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14825;old_locus_tag=YP2849%2CYP_2849 NC_005810.1 Protein Homology CDS 3162542 3162991 . + 0 ID=cds2887;Parent=gene2954;Dbxref=Genbank:WP_002226092.1;Name=WP_002226092.1;gbkey=CDS;product=membrane protein;protein_id=WP_002226092.1;transl_table=11 NC_005810.1 RefSeq gene 3163020 3163859 . + . ID=gene2955;Name=YP_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14830;old_locus_tag=YP2850%2CYP_2850 NC_005810.1 Protein Homology CDS 3163020 3163859 . + 0 ID=cds2888;Parent=gene2955;Dbxref=Genbank:WP_002209856.1;Name=WP_002209856.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11 NC_005810.1 RefSeq gene 3163843 3164208 . - . ID=gene2956;Name=YP_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14835;old_locus_tag=YP2851%2CYP_2851 NC_005810.1 Protein Homology CDS 3163843 3164208 . - 0 ID=cds2889;Parent=gene2956;Dbxref=Genbank:WP_002230661.1;Name=WP_002230661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230661.1;transl_table=11 NC_005810.1 RefSeq gene 3164492 3164890 . + . ID=gene2957;Name=YP_RS14840;end_range=3164890,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS14840;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 3164492 3164890 . + 0 ID=cds2890;Parent=gene2957;end_range=3164890,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 3164882 3166202 . + . ID=id598;gbkey=repeat_region NC_005810.1 RefSeq region 3164884 3166198 . + . ID=id599;gbkey=mobile_element NC_005810.1 RefSeq gene 3164955 3166163 . + . ID=gene2958;Name=YP_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14845;old_locus_tag=YP2853%2CYP_2853 NC_005810.1 Protein Homology CDS 3164955 3166163 . + 0 ID=cds2891;Parent=gene2958;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 3166187 3166531 . + . ID=gene2959;Name=YP_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14850 NC_005810.1 Protein Homology CDS 3166187 3166531 . + 0 ID=cds2892;Parent=gene2959;Dbxref=Genbank:WP_041175919.1;Name=WP_041175919.1;gbkey=CDS;product=regulatory membrane protein;protein_id=WP_041175919.1;transl_table=11 NC_005810.1 RefSeq gene 3166528 3166929 . + . ID=gene2960;Name=YP_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14855;old_locus_tag=YP2854%2CYP_2854 NC_005810.1 Protein Homology CDS 3166528 3166929 . + 0 ID=cds2893;Parent=gene2960;Dbxref=Genbank:WP_002214100.1;Name=WP_002214100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214100.1;transl_table=11 NC_005810.1 RefSeq gene 3167084 3168775 . + . ID=gene2961;Name=YP_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14860;old_locus_tag=YP2855%2CYP_2855 NC_005810.1 Protein Homology CDS 3167084 3168775 . + 0 ID=cds2894;Parent=gene2961;Dbxref=Genbank:WP_011906285.1;Name=WP_011906285.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_011906285.1;transl_table=11 NC_005810.1 RefSeq gene 3168761 3169396 . - . ID=gene2962;Name=YP_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14865;old_locus_tag=YP2856%2CYP_2856 NC_005810.1 Protein Homology CDS 3168761 3169396 . - 0 ID=cds2895;Parent=gene2962;Dbxref=Genbank:WP_002209852.1;Name=WP_002209852.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002209852.1;transl_table=11 NC_005810.1 RefSeq gene 3169509 3170396 . - . ID=gene2963;Name=YP_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14870;old_locus_tag=YP2857%2CYP_2857 NC_005810.1 Protein Homology CDS 3169509 3170396 . - 0 ID=cds2896;Parent=gene2963;Dbxref=Genbank:WP_002209850.1;Name=WP_002209850.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002209850.1;transl_table=11 NC_005810.1 RefSeq gene 3170503 3171411 . + . ID=gene2964;Name=YP_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14875;old_locus_tag=YP2858%2CYP_2858 NC_005810.1 Protein Homology CDS 3170503 3171411 . + 0 ID=cds2897;Parent=gene2964;Dbxref=Genbank:WP_002209849.1;Name=WP_002209849.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3171409 3171440 . + . ID=id600;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3171780 3172940 . + . ID=gene2965;Name=YP_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14880;old_locus_tag=YP2859%2CYP_2859 NC_005810.1 Protein Homology CDS 3171780 3172940 . + 0 ID=cds2898;Parent=gene2965;Dbxref=Genbank:WP_002209848.1;Name=WP_002209848.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11 NC_005810.1 RefSeq gene 3172937 3173878 . - . ID=gene2966;Name=YP_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14885;old_locus_tag=YP2860%2CYP_2860 NC_005810.1 Protein Homology CDS 3172937 3173878 . - 0 ID=cds2899;Parent=gene2966;Dbxref=Genbank:WP_002209847.1;Name=WP_002209847.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209847.1;transl_table=11 NC_005810.1 RefSeq gene 3174093 3175355 . + . ID=gene2967;Name=YP_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14890;old_locus_tag=YP2861%2CYP_2861 NC_005810.1 Protein Homology CDS 3174093 3175355 . + 0 ID=cds2900;Parent=gene2967;Dbxref=Genbank:WP_002209846.1;Name=WP_002209846.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_002209846.1;transl_table=11 NC_005810.1 RefSeq gene 3175352 3176374 . - . ID=gene2968;Name=YP_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14895;old_locus_tag=YP2862%2CYP_2862 NC_005810.1 Protein Homology CDS 3175352 3176374 . - 0 ID=cds2901;Parent=gene2968;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11 NC_005810.1 RefSeq gene 3176684 3178945 . + . ID=gene2969;Name=YP_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14900;old_locus_tag=YP2863%2CYP_2863 NC_005810.1 Protein Homology CDS 3176684 3178945 . + 0 ID=cds2902;Parent=gene2969;Dbxref=Genbank:WP_002209844.1;Name=WP_002209844.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_002209844.1;transl_table=11 NC_005810.1 RefSeq gene 3179394 3181550 . + . ID=gene2970;Name=YP_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14905;old_locus_tag=YP2864%2CYP_2864 NC_005810.1 Protein Homology CDS 3179394 3181550 . + 0 ID=cds2903;Parent=gene2970;Dbxref=Genbank:WP_002230664.1;Name=WP_002230664.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=bifunctional protein Aas;protein_id=WP_002230664.1;transl_table=11 NC_005810.1 RefSeq gene 3181547 3182767 . + . ID=gene2971;Name=YP_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14910;old_locus_tag=YP2865%2CYP_2865 NC_005810.1 Protein Homology CDS 3181547 3182767 . + 0 ID=cds2904;Parent=gene2971;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NC_005810.1 RefSeq gene 3182796 3183029 . - . ID=gene2972;Name=YP_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14915;old_locus_tag=YP2866%2CYP_2866 NC_005810.1 Protein Homology CDS 3182796 3183029 . - 0 ID=cds2905;Parent=gene2972;Dbxref=Genbank:WP_002228641.1;Name=WP_002228641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228641.1;transl_table=11 NC_005810.1 RefSeq gene 3183108 3183359 . + . ID=gene2973;Name=YP_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14920;old_locus_tag=YP2867%2CYP_2867 NC_005810.1 Protein Homology CDS 3183108 3183359 . + 0 ID=cds2906;Parent=gene2973;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3183512 3183680 . + . ID=id601;gbkey=repeat_region NC_005810.1 RefSeq gene 3183736 3184776 . - . ID=gene2974;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YP_RS14925;old_locus_tag=YP2868%2CYP_2868 NC_005810.1 Protein Homology CDS 3183736 3184776 . - 0 ID=cds2907;Parent=gene2974;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3184968 3185021 . + . ID=id602;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3185147 3185833 . - . ID=gene2975;Name=YP_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14930;old_locus_tag=YP2869%2CYP_2869 NC_005810.1 Protein Homology CDS 3185147 3185833 . - 0 ID=cds2908;Parent=gene2975;Dbxref=Genbank:WP_002209838.1;Name=WP_002209838.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_002209838.1;transl_table=11 NC_005810.1 RefSeq gene 3186066 3186257 . + . ID=gene2976;Name=YP_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14935;old_locus_tag=YP2870%2CYP_2870 NC_005810.1 Protein Homology CDS 3186066 3186257 . + 0 ID=cds2909;Parent=gene2976;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11 NC_005810.1 RefSeq gene 3186254 3186505 . + . ID=gene2977;Name=YP_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14940;old_locus_tag=YP2871%2CYP_2871 NC_005810.1 Protein Homology CDS 3186254 3186505 . + 0 ID=cds2910;Parent=gene2977;Dbxref=Genbank:WP_002228075.1;Name=WP_002228075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228075.1;transl_table=11 NC_005810.1 RefSeq gene 3186531 3187058 . + . ID=gene2978;Name=YP_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14945;old_locus_tag=YP2872%2CYP_2872 NC_005810.1 Protein Homology CDS 3186531 3187058 . + 0 ID=cds2911;Parent=gene2978;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NC_005810.1 RefSeq gene 3187071 3189317 . + . ID=gene2979;Name=YP_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14950;old_locus_tag=YP2873%2CYP_2873 NC_005810.1 Protein Homology CDS 3187071 3189317 . + 0 ID=cds2912;Parent=gene2979;Dbxref=Genbank:WP_002228076.1;Name=WP_002228076.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002228076.1;transl_table=11 NC_005810.1 RefSeq gene 3189568 3190440 . + . ID=gene2980;Name=YP_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14955;old_locus_tag=YP2874%2CYP_2874 NC_005810.1 Protein Homology CDS 3189568 3190440 . + 0 ID=cds2913;Parent=gene2980;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NC_005810.1 RefSeq gene 3190447 3191241 . + . ID=gene2981;Name=YP_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14960;old_locus_tag=YP2875%2CYP_2875 NC_005810.1 Protein Homology CDS 3190447 3191241 . + 0 ID=cds2914;Parent=gene2981;Dbxref=Genbank:WP_002211384.1;Name=WP_002211384.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_002211384.1;transl_table=11 NC_005810.1 RefSeq gene 3191272 3191490 . + . ID=gene2982;Name=YP_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14965;old_locus_tag=YP2876%2CYP_2876 NC_005810.1 Protein Homology CDS 3191272 3191490 . + 0 ID=cds2915;Parent=gene2982;Dbxref=Genbank:WP_002217548.1;Name=WP_002217548.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217548.1;transl_table=11 NC_005810.1 RefSeq gene 3191477 3192046 . + . ID=gene2983;Name=YP_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14970;old_locus_tag=YP2877%2CYP_2877 NC_005810.1 Protein Homology CDS 3191477 3192046 . + 0 ID=cds2916;Parent=gene2983;Dbxref=Genbank:WP_002228638.1;Name=WP_002228638.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002228638.1;transl_table=11 NC_005810.1 RefSeq gene 3192037 3192645 . + . ID=gene2984;Name=YP_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14975;old_locus_tag=YP2878%2CYP_2878 NC_005810.1 Protein Homology CDS 3192037 3192645 . + 0 ID=cds2917;Parent=gene2984;Dbxref=Genbank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002211630.1;transl_table=11 NC_005810.1 RefSeq gene 3192642 3193112 . + . ID=gene2985;Name=YP_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14980;old_locus_tag=YP2879%2CYP_2879 NC_005810.1 Protein Homology CDS 3192642 3193112 . + 0 ID=cds2918;Parent=gene2985;Dbxref=Genbank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211629.1;transl_table=11 NC_005810.1 RefSeq gene 3193145 3193510 . + . ID=gene2986;Name=YP_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14985;old_locus_tag=YP2880%2CYP_2880 NC_005810.1 Protein Homology CDS 3193145 3193510 . + 0 ID=cds2919;Parent=gene2986;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11 NC_005810.1 RefSeq gene 3193645 3197016 . + . ID=gene2987;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YP_RS14990;old_locus_tag=YP2881%2CYP_2881 NC_005810.1 Protein Homology CDS 3193645 3197016 . + 0 ID=cds2920;Parent=gene2987;Dbxref=Genbank:WP_002211627.1;Name=WP_002211627.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_002211627.1;transl_table=11 NC_005810.1 RefSeq gene 3197098 3199986 . + . ID=gene2988;Name=YP_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS14995;old_locus_tag=YP2882%2CYP_2882 NC_005810.1 Protein Homology CDS 3197098 3199986 . + 0 ID=cds2921;Parent=gene2988;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11 NC_005810.1 RefSeq gene 3199983 3203645 . + . ID=gene2989;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=YP_RS15000;old_locus_tag=YP2883%2CYP_2883 NC_005810.1 Protein Homology CDS 3199983 3203645 . + 0 ID=cds2922;Parent=gene2989;Dbxref=Genbank:WP_002215833.1;Name=WP_002215833.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_002215833.1;transl_table=11 NC_005810.1 RefSeq gene 3203642 3205600 . + . ID=gene2990;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YP_RS15005;old_locus_tag=YP2884%2CYP_2884 NC_005810.1 Protein Homology CDS 3203642 3205600 . + 0 ID=cds2923;Parent=gene2990;Dbxref=Genbank:WP_002215834.1;Name=WP_002215834.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_002215834.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3205781 3207738 . + . ID=id603;gbkey=repeat_region NC_005810.1 RefSeq region 3205784 3207736 . - . ID=id604;gbkey=mobile_element NC_005810.1 RefSeq gene 3205849 3206628 . - . ID=gene2991;Name=YP_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15010;old_locus_tag=YP2885%2CYP_2885 NC_005810.1 Protein Homology CDS 3205849 3206628 . - 0 ID=cds2924;Parent=gene2991;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 3206628 3207650 . - . ID=gene2992;Name=YP_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15015;old_locus_tag=YP2886%2CYP_2886 NC_005810.1 Protein Homology CDS 3206628 3207650 . - 0 ID=cds2925;Parent=gene2992;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 3207664 3207843 . - . ID=gene2993;Name=YP_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15020 NC_005810.1 Protein Homology CDS 3207664 3207843 . - 0 ID=cds2926;Parent=gene2993;Dbxref=Genbank:WP_002210422.1;Name=WP_002210422.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002210422.1;transl_table=11 NC_005810.1 RefSeq gene 3207929 3208324 . - . ID=gene2994;Name=YP_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15025;old_locus_tag=YP2887%2CYP_2887 NC_005810.1 Protein Homology CDS 3207929 3208324 . - 0 ID=cds2927;Parent=gene2994;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11 NC_005810.1 RefSeq gene 3208628 3208912 . - . ID=gene2995;Name=YP_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15030;old_locus_tag=YP2888%2CYP_2888 NC_005810.1 Protein Homology CDS 3208628 3208912 . - 0 ID=cds2928;Parent=gene2995;Dbxref=Genbank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002210420.1;transl_table=11 NC_005810.1 RefSeq gene 3208909 3209304 . - . ID=gene2996;Name=YP_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15035;old_locus_tag=YP2889%2CYP_2889 NC_005810.1 Protein Homology CDS 3208909 3209304 . - 0 ID=cds2929;Parent=gene2996;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11 NC_005810.1 RefSeq gene 3209307 3209612 . - . ID=gene2997;Name=YP_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15040;old_locus_tag=YP2890%2CYP_2890 NC_005810.1 Protein Homology CDS 3209307 3209612 . - 0 ID=cds2930;Parent=gene2997;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11 NC_005810.1 RefSeq gene 3209617 3209763 . - . ID=gene2998;Name=YP_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15045;old_locus_tag=YP2891%2CYP_2891 NC_005810.1 Protein Homology CDS 3209617 3209763 . - 0 ID=cds2931;Parent=gene2998;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11 NC_005810.1 RefSeq gene 3209767 3210147 . - . ID=gene2999;Name=YP_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15050;old_locus_tag=YP2892 NC_005810.1 Protein Homology CDS 3209767 3210147 . - 0 ID=cds2932;Parent=gene2999;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11 NC_005810.1 RefSeq gene 3210373 3210762 . - . ID=gene3000;Name=YP_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15055;old_locus_tag=YP2893%2CYP_2893 NC_005810.1 Protein Homology CDS 3210373 3210762 . - 0 ID=cds2933;Parent=gene3000;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11 NC_005810.1 RefSeq gene 3210759 3211457 . - . ID=gene3001;Name=YP_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15060;old_locus_tag=YP2894%2CYP_2894 NC_005810.1 Protein Homology CDS 3210759 3211457 . - 0 ID=cds2934;Parent=gene3001;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3211669 3211700 . + . ID=id605;Note=exact repeat region containing 2 copies of a 16 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3211735 3212268 . - . ID=gene3002;Name=YP_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15065;old_locus_tag=YP2895%2CYP_2895 NC_005810.1 Protein Homology CDS 3211735 3212268 . - 0 ID=cds2935;Parent=gene3002;Dbxref=Genbank:WP_002218957.1;Name=WP_002218957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218957.1;transl_table=11 NC_005810.1 RefSeq gene 3212517 3213311 . - . ID=gene3003;Name=YP_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15070;old_locus_tag=YP2896%2CYP_2896 NC_005810.1 Protein Homology CDS 3212517 3213311 . - 0 ID=cds2936;Parent=gene3003;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11 NC_005810.1 RefSeq gene 3213574 3214875 . - . ID=gene3004;Name=YP_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15075;old_locus_tag=YP2897%2CYP_2897 NC_005810.1 Protein Homology CDS 3213574 3214875 . - 0 ID=cds2937;Parent=gene3004;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11 NC_005810.1 RefSeq gene 3214925 3215092 . + . ID=gene3005;Name=YP_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15080;old_locus_tag=YP2898%2CYP_2898 NC_005810.1 Protein Homology CDS 3214925 3215092 . + 0 ID=cds2938;Parent=gene3005;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11 NC_005810.1 RefSeq gene 3215623 3217032 . + . ID=gene3006;Name=YP_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15085;old_locus_tag=YP2899%2CYP_2899 NC_005810.1 Protein Homology CDS 3215623 3217032 . + 0 ID=cds2939;Parent=gene3006;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11 NC_005810.1 RefSeq gene 3217231 3218682 . + . ID=gene3007;Name=YP_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15090;old_locus_tag=YP2900%2CYP_2900 NC_005810.1 Protein Homology CDS 3217231 3218682 . + 0 ID=cds2940;Parent=gene3007;Dbxref=Genbank:WP_002230574.1;Name=WP_002230574.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_002230574.1;transl_table=11 NC_005810.1 RefSeq gene 3218693 3220183 . + . ID=gene3008;Name=YP_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15095;old_locus_tag=YP2901%2CYP_2901 NC_005810.1 Protein Homology CDS 3218693 3220183 . + 0 ID=cds2941;Parent=gene3008;Dbxref=Genbank:WP_002210408.1;Name=WP_002210408.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_002210408.1;transl_table=11 NC_005810.1 RefSeq gene 3220336 3220866 . + . ID=gene3009;Name=YP_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15100;old_locus_tag=YP2902%2CYP_2902 NC_005810.1 Protein Homology CDS 3220336 3220866 . + 0 ID=cds2942;Parent=gene3009;Dbxref=Genbank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210407.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3220873 3221596 . + . ID=id606;gbkey=repeat_region NC_005810.1 RefSeq region 3220876 3221587 . - . ID=id607;gbkey=mobile_element NC_005810.1 RefSeq gene 3220984 3221442 . - . ID=gene3010;Name=YP_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15105;old_locus_tag=YP2903%2CYP_2903 NC_005810.1 Protein Homology CDS 3220984 3221442 . - 0 ID=cds2943;Parent=gene3010;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 3221643 3222899 . - . ID=gene3011;Name=YP_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15110;old_locus_tag=YP2904%2CYP_2904 NC_005810.1 Protein Homology CDS 3221643 3222899 . - 0 ID=cds2944;Parent=gene3011;Dbxref=Genbank:WP_002216063.1;Name=WP_002216063.1;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=WP_002216063.1;transl_table=11 NC_005810.1 RefSeq gene 3223434 3224429 . - . ID=gene3012;Name=YP_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15115;old_locus_tag=YP2905%2CYP_2905 NC_005810.1 Protein Homology CDS 3223434 3224429 . - 0 ID=cds2945;Parent=gene3012;Dbxref=Genbank:WP_002210405.1;Name=WP_002210405.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210405.1;transl_table=11 NC_005810.1 RefSeq gene 3224647 3225156 . - . ID=gene3013;Name=YP_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15120;old_locus_tag=YP2906%2CYP_2906 NC_005810.1 Protein Homology CDS 3224647 3225156 . - 0 ID=cds2946;Parent=gene3013;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11 NC_005810.1 RefSeq gene 3225395 3228208 . - . ID=gene3014;Name=YP_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15125;old_locus_tag=YP2907%2CYP_2907 NC_005810.1 Protein Homology CDS 3225395 3228208 . - 0 ID=cds2947;Parent=gene3014;Dbxref=Genbank:WP_002353701.1;Name=WP_002353701.1;gbkey=CDS;product=autotransporter;protein_id=WP_002353701.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3226527 3226867 . + . ID=id608;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3226527 3226802 . + . ID=id609;Note=degenerate repeat region containing 2 copies of a 138bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3228848 3230035 . + . ID=gene3015;Name=YP_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15130;old_locus_tag=YP2908%2CYP_2908 NC_005810.1 Protein Homology CDS 3228848 3230035 . + 0 ID=cds2948;Parent=gene3015;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11 NC_005810.1 RefSeq gene 3230151 3232172 . - . ID=gene3016;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=YP_RS15135;old_locus_tag=YP2909%2CYP_2909 NC_005810.1 Protein Homology CDS 3230151 3232172 . - 0 ID=cds2949;Parent=gene3016;Dbxref=Genbank:WP_002210401.1;Name=WP_002210401.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_002210401.1;transl_table=11 NC_005810.1 RefSeq gene 3232385 3232954 . - . ID=gene3017;Name=YP_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15140;old_locus_tag=YP2910%2CYP_2910 NC_005810.1 Protein Homology CDS 3232385 3232954 . - 0 ID=cds2950;Parent=gene3017;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11 NC_005810.1 RefSeq gene 3233050 3233283 . + . ID=gene3018;Name=YP_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15145;old_locus_tag=YP2911%2CYP_2911 NC_005810.1 Protein Homology CDS 3233050 3233283 . + 0 ID=cds2951;Parent=gene3018;Dbxref=Genbank:WP_002214938.1;Name=WP_002214938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214938.1;transl_table=11 NC_005810.1 RefSeq gene 3233345 3234844 . - . ID=gene3019;Name=YP_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15150;old_locus_tag=YP2912%2CYP_2912 NC_005810.1 Protein Homology CDS 3233345 3234844 . - 0 ID=cds2952;Parent=gene3019;Dbxref=Genbank:WP_011171920.1;Name=WP_011171920.1;gbkey=CDS;product=kinase;protein_id=WP_011171920.1;transl_table=11 NC_005810.1 RefSeq gene 3234876 3236609 . - . ID=gene3020;Name=YP_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15155;old_locus_tag=YP2913%2CYP_2913 NC_005810.1 Protein Homology CDS 3234876 3236609 . - 0 ID=cds2953;Parent=gene3020;Dbxref=Genbank:WP_002210398.1;Name=WP_002210398.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210398.1;transl_table=11 NC_005810.1 RefSeq gene 3236609 3237649 . - . ID=gene3021;Name=YP_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15160;old_locus_tag=YP2914 NC_005810.1 Protein Homology CDS 3236609 3237649 . - 0 ID=cds2954;Parent=gene3021;Dbxref=Genbank:WP_002230582.1;Name=WP_002230582.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230582.1;transl_table=11 NC_005810.1 RefSeq gene 3237751 3238389 . - . ID=gene3022;Name=YP_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15165;old_locus_tag=YP2915%2CYP_2915 NC_005810.1 Protein Homology CDS 3237751 3238389 . - 0 ID=cds2955;Parent=gene3022;Dbxref=Genbank:WP_016595382.1;Name=WP_016595382.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_016595382.1;transl_table=11 NC_005810.1 RefSeq gene 3238391 3239032 . - . ID=gene3023;Name=YP_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15170;old_locus_tag=YP2916%2CYP_2916 NC_005810.1 Protein Homology CDS 3238391 3239032 . - 0 ID=cds2956;Parent=gene3023;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11 NC_005810.1 RefSeq gene 3239065 3239703 . - . ID=gene3024;Name=YP_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15175;old_locus_tag=YP2917%2CYP_2917 NC_005810.1 Protein Homology CDS 3239065 3239703 . - 0 ID=cds2957;Parent=gene3024;Dbxref=Genbank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002210395.1;transl_table=11 NC_005810.1 RefSeq gene 3240418 3242106 . + . ID=gene3025;Name=YP_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15180;old_locus_tag=YP2918%2CYP_2918 NC_005810.1 Protein Homology CDS 3240418 3242106 . + 0 ID=cds2958;Parent=gene3025;Dbxref=Genbank:WP_002210394.1;Name=WP_002210394.1;gbkey=CDS;product=outer membrane transporter CdiB;protein_id=WP_002210394.1;transl_table=11 NC_005810.1 RefSeq gene 3242151 3252038 . + . ID=gene3026;Name=YP_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15185;old_locus_tag=YP2919%2CYP_2919 NC_005810.1 Protein Homology CDS 3242151 3252038 . + 0 ID=cds2959;Parent=gene3026;Dbxref=Genbank:WP_011171922.1;Name=WP_011171922.1;gbkey=CDS;product=adhesin;protein_id=WP_011171922.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3247253 3248000 . + . ID=id610;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3247365 3247394 . + . ID=id611;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3248628 3248771 . + . ID=id612;gbkey=repeat_region NC_005810.1 RefSeq gene 3252035 3252268 . + . ID=gene3027;Name=YP_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15190;old_locus_tag=YP2920%2CYP_2920 NC_005810.1 Protein Homology CDS 3252035 3252268 . + 0 ID=cds2960;Parent=gene3027;Dbxref=Genbank:WP_002214946.1;Name=WP_002214946.1;gbkey=CDS;product=immunity protein CdiI;protein_id=WP_002214946.1;transl_table=11 NC_005810.1 RefSeq gene 3252330 3252479 . + . ID=gene3028;Name=YP_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15195 NC_005810.1 Protein Homology CDS 3252330 3252479 . + 0 ID=cds2961;Parent=gene3028;Dbxref=Genbank:WP_002214947.1;Name=WP_002214947.1;gbkey=CDS;product=adhesin;protein_id=WP_002214947.1;transl_table=11 NC_005810.1 RefSeq gene 3252534 3252761 . + . ID=gene3029;Name=YP_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15200;old_locus_tag=YP2921%2CYP_2921 NC_005810.1 Protein Homology CDS 3252534 3252761 . + 0 ID=cds2962;Parent=gene3029;Dbxref=Genbank:WP_002214949.1;Name=WP_002214949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214949.1;transl_table=11 NC_005810.1 RefSeq gene 3252842 3253273 . + . ID=gene3030;Name=YP_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15205;old_locus_tag=YP2922%2CYP_2922 NC_005810.1 Protein Homology CDS 3252842 3253273 . + 0 ID=cds2963;Parent=gene3030;Dbxref=Genbank:WP_002228093.1;Name=WP_002228093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228093.1;transl_table=11 NC_005810.1 RefSeq gene 3253306 3254061 . + . ID=gene3031;Name=YP_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15210;old_locus_tag=YP2923%2CYP_2923 NC_005810.1 Protein Homology CDS 3253306 3254061 . + 0 ID=cds2964;Parent=gene3031;Dbxref=Genbank:WP_002230585.1;Name=WP_002230585.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002230585.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3253311 3254058 . + . ID=id613;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3253423 3253452 . + . ID=id614;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3254095 3254238 . + . ID=id615;gbkey=repeat_region NC_005810.1 RefSeq gene 3254125 3254289 . + . ID=gene3032;Name=YP_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15215 NC_005810.1 Protein Homology CDS 3254125 3254289 . + 0 ID=cds2965;Parent=gene3032;Dbxref=Genbank:WP_002228290.1;Name=WP_002228290.1;gbkey=CDS;product=adhesin;protein_id=WP_002228290.1;transl_table=11 NC_005810.1 RefSeq gene 3254557 3256842 . - . ID=gene3033;Name=YP_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15220;old_locus_tag=YP2924%2CYP_2924 NC_005810.1 Protein Homology CDS 3254557 3256842 . - 0 ID=cds2966;Parent=gene3033;Dbxref=Genbank:WP_002230586.1;Name=WP_002230586.1;gbkey=CDS;product=autotransporter;protein_id=WP_002230586.1;transl_table=11 NC_005810.1 RefSeq gene 3256902 3257897 . - . ID=gene3034;Name=YP_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15225;old_locus_tag=YP2925%2CYP_2925 NC_005810.1 Protein Homology CDS 3256902 3257897 . - 0 ID=cds2967;Parent=gene3034;Dbxref=Genbank:WP_002210388.1;Name=WP_002210388.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210388.1;transl_table=11 NC_005810.1 RefSeq gene 3257999 3259378 . - . ID=gene3035;Name=YP_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15230;old_locus_tag=YP2926%2CYP_2926 NC_005810.1 Protein Homology CDS 3257999 3259378 . - 0 ID=cds2968;Parent=gene3035;Dbxref=Genbank:WP_002210387.1;Name=WP_002210387.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210387.1;transl_table=11 NC_005810.1 RefSeq gene 3259704 3260819 . + . ID=gene3036;Name=YP_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15235;old_locus_tag=YP2927%2CYP_2927 NC_005810.1 Protein Homology CDS 3259704 3260819 . + 0 ID=cds2969;Parent=gene3036;Dbxref=Genbank:WP_002353714.1;Name=WP_002353714.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002353714.1;transl_table=11 NC_005810.1 RefSeq gene 3260902 3264255 . + . ID=gene3037;Name=YP_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15240;old_locus_tag=YP2928%2CYP_2928 NC_005810.1 Protein Homology CDS 3260902 3264255 . + 0 ID=cds2970;Parent=gene3037;Dbxref=Genbank:WP_002214212.1;Name=WP_002214212.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214212.1;transl_table=11 NC_005810.1 RefSeq gene 3264364 3265350 . + . ID=gene3038;Name=YP_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15245;old_locus_tag=YP2929%2CYP_2929 NC_005810.1 Protein Homology CDS 3264364 3265350 . + 0 ID=cds2971;Parent=gene3038;Dbxref=Genbank:WP_002210384.1;Name=WP_002210384.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210384.1;transl_table=11 NC_005810.1 RefSeq gene 3265427 3266671 . + . ID=gene3039;Name=YP_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15250;old_locus_tag=YP2930%2CYP_2930 NC_005810.1 Protein Homology CDS 3265427 3266671 . + 0 ID=cds2972;Parent=gene3039;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11 NC_005810.1 RefSeq gene 3266725 3267606 . + . ID=gene3040;Name=YP_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15255;old_locus_tag=YP2931%2CYP_2931 NC_005810.1 Protein Homology CDS 3266725 3267606 . + 0 ID=cds2973;Parent=gene3040;Dbxref=Genbank:WP_002210382.1;Name=WP_002210382.1;gbkey=CDS;product=permease;protein_id=WP_002210382.1;transl_table=11 NC_005810.1 RefSeq gene 3267606 3268424 . + . ID=gene3041;Name=YP_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15260;old_locus_tag=YP2932%2CYP_2932 NC_005810.1 Protein Homology CDS 3267606 3268424 . + 0 ID=cds2974;Parent=gene3041;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11 NC_005810.1 RefSeq gene 3268421 3268936 . + . ID=gene3042;Name=YP_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15265;old_locus_tag=YP2933%2CYP_2933 NC_005810.1 Protein Homology CDS 3268421 3268936 . + 0 ID=cds2975;Parent=gene3042;Dbxref=Genbank:WP_002210380.1;Name=WP_002210380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210380.1;transl_table=11 NC_005810.1 RefSeq gene 3268987 3271170 . + . ID=gene3043;Name=YP_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15270;old_locus_tag=YP2934%2CYP_2934 NC_005810.1 Protein Homology CDS 3268987 3271170 . + 0 ID=cds2976;Parent=gene3043;Dbxref=Genbank:WP_002210379.1;Name=WP_002210379.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210379.1;transl_table=11 NC_005810.1 RefSeq gene 3271234 3272760 . - . ID=gene3044;Name=YP_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15275;old_locus_tag=YP2935%2CYP_2935 NC_005810.1 Protein Homology CDS 3271234 3272760 . - 0 ID=cds2977;Parent=gene3044;Dbxref=Genbank:WP_002214220.1;Name=WP_002214220.1;gbkey=CDS;product=transporter;protein_id=WP_002214220.1;transl_table=11 NC_005810.1 RefSeq gene 3272765 3274666 . - . ID=gene3045;Name=YP_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15280;old_locus_tag=YP2936%2CYP_2936 NC_005810.1 Protein Homology CDS 3272765 3274666 . - 0 ID=cds2978;Parent=gene3045;Dbxref=Genbank:WP_002210377.1;Name=WP_002210377.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_002210377.1;transl_table=11 NC_005810.1 RefSeq gene 3274650 3275699 . - . ID=gene3046;Name=YP_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15285;old_locus_tag=YP2937%2CYP_2937 NC_005810.1 Protein Homology CDS 3274650 3275699 . - 0 ID=cds2979;Parent=gene3046;Dbxref=Genbank:WP_002210376.1;Name=WP_002210376.1;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=WP_002210376.1;transl_table=11 NC_005810.1 RefSeq gene 3275709 3276044 . - . ID=gene3047;Name=YP_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15290;old_locus_tag=YP2938 NC_005810.1 Protein Homology CDS 3275709 3276044 . - 0 ID=cds2980;Parent=gene3047;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11 NC_005810.1 RefSeq gene 3276041 3276241 . - . ID=gene3048;Name=YP_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15295;old_locus_tag=YP2939%2CYP_2939 NC_005810.1 Protein Homology CDS 3276041 3276241 . - 0 ID=cds2981;Parent=gene3048;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NC_005810.1 RefSeq gene 3276414 3276521 . - . ID=gene3049;Name=YP_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15300 NC_005810.1 Protein Homology CDS 3276414 3276521 . - 0 ID=cds2982;Parent=gene3049;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11 NC_005810.1 RefSeq gene 3277007 3278239 . + . ID=gene3050;Name=YP_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15305;old_locus_tag=YP2940%2CYP_2940 NC_005810.1 Protein Homology CDS 3277007 3278239 . + 0 ID=cds2983;Parent=gene3050;Dbxref=Genbank:WP_002210373.1;Name=WP_002210373.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002210373.1;transl_table=11 NC_005810.1 RefSeq gene 3278232 3279683 . + . ID=gene3051;Name=YP_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15310;old_locus_tag=YP2941%2CYP_2941 NC_005810.1 Protein Homology CDS 3278232 3279683 . + 0 ID=cds2984;Parent=gene3051;Dbxref=Genbank:WP_002214229.1;Name=WP_002214229.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002214229.1;transl_table=11 NC_005810.1 RefSeq gene 3279696 3280133 . + . ID=gene3052;Name=YP_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15315;old_locus_tag=YP2942%2CYP_2942 NC_005810.1 Protein Homology CDS 3279696 3280133 . + 0 ID=cds2985;Parent=gene3052;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11 NC_005810.1 RefSeq gene 3280267 3280890 . + . ID=gene3053;Name=YP_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15320;old_locus_tag=YP2943%2CYP_2943 NC_005810.1 Protein Homology CDS 3280267 3280890 . + 0 ID=cds2986;Parent=gene3053;Dbxref=Genbank:WP_011171924.1;Name=WP_011171924.1;gbkey=CDS;product=histidine kinase;protein_id=WP_011171924.1;transl_table=11 NC_005810.1 RefSeq gene 3280906 3281286 . + . ID=gene3054;Name=YP_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15325;old_locus_tag=YP2944%2CYP_2944 NC_005810.1 Protein Homology CDS 3280906 3281286 . + 0 ID=cds2987;Parent=gene3054;Dbxref=Genbank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210370.1;transl_table=11 NC_005810.1 RefSeq gene 3281571 3281975 . + . ID=gene3055;Name=YP_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15330;old_locus_tag=YP2945%2CYP_2945 NC_005810.1 Protein Homology CDS 3281571 3281975 . + 0 ID=cds2988;Parent=gene3055;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11 NC_005810.1 RefSeq gene 3282190 3282492 . - . ID=gene3056;Name=YP_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15335;old_locus_tag=YP2946%2CYP_2946 NC_005810.1 Protein Homology CDS 3282190 3282492 . - 0 ID=cds2989;Parent=gene3056;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NC_005810.1 RefSeq gene 3282752 3283468 . - . ID=gene3057;Name=YP_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15340;old_locus_tag=YP2947%2CYP_2947 NC_005810.1 Protein Homology CDS 3282752 3283468 . - 0 ID=cds2990;Parent=gene3057;Dbxref=Genbank:WP_002210367.1;Name=WP_002210367.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002210367.1;transl_table=11 NC_005810.1 RefSeq gene 3283630 3284562 . + . ID=gene3058;Name=YP_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15345;old_locus_tag=YP2948%2CYP_2948 NC_005810.1 Protein Homology CDS 3283630 3284562 . + 0 ID=cds2991;Parent=gene3058;Dbxref=Genbank:WP_002210366.1;Name=WP_002210366.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210366.1;transl_table=11 NC_005810.1 RefSeq gene 3285013 3285216 . + . ID=gene3059;Name=YP_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15350 NC_005810.1 Protein Homology CDS 3285013 3285216 . + 0 ID=cds2992;Parent=gene3059;Dbxref=Genbank:WP_002210365.1;Name=WP_002210365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210365.1;transl_table=11 NC_005810.1 RefSeq gene 3285312 3285524 . + . ID=gene3060;Name=YP_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15355 NC_005810.1 Protein Homology CDS 3285312 3285524 . + 0 ID=cds2993;Parent=gene3060;Dbxref=Genbank:WP_002218980.1;Name=WP_002218980.1;gbkey=CDS;product=cell filamentation protein Fic;protein_id=WP_002218980.1;transl_table=11 NC_005810.1 RefSeq gene 3285521 3285652 . - . ID=gene3061;Name=YP_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15360 NC_005810.1 Protein Homology CDS 3285521 3285652 . - 0 ID=cds2994;Parent=gene3061;Dbxref=Genbank:WP_032487993.1;Name=WP_032487993.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032487993.1;transl_table=11 NC_005810.1 RefSeq gene 3285878 3286078 . - . ID=gene3062;Name=YP_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15365;old_locus_tag=YP2950%2CYP_2950 NC_005810.1 Protein Homology CDS 3285878 3286078 . - 0 ID=cds2995;Parent=gene3062;Dbxref=Genbank:WP_002214239.1;Name=WP_002214239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214239.1;transl_table=11 NC_005810.1 RefSeq gene 3286236 3286466 . + . ID=gene3063;Name=YP_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15370;old_locus_tag=YP2951%2CYP_2951 NC_005810.1 Protein Homology CDS 3286236 3286466 . + 0 ID=cds2996;Parent=gene3063;Dbxref=Genbank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3286480 3287032 . + . ID=id616;gbkey=repeat_region NC_005810.1 RefSeq gene 3286599 3287981 . + . ID=gene3064;Name=YP_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15375;old_locus_tag=YP2952%2CYP_2952 NC_005810.1 Protein Homology CDS 3286599 3287981 . + 0 ID=cds2997;Parent=gene3064;Dbxref=Genbank:WP_002210362.1;Name=WP_002210362.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002210362.1;transl_table=11 NC_005810.1 RefSeq gene 3287990 3288460 . + . ID=gene3065;Name=YP_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15380;old_locus_tag=YP2953%2CYP_2953 NC_005810.1 Protein Homology CDS 3287990 3288460 . + 0 ID=cds2998;Parent=gene3065;Dbxref=Genbank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210361.1;transl_table=11 NC_005810.1 RefSeq gene 3288487 3288942 . + . ID=gene3066;Name=YP_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15385;old_locus_tag=YP2954%2CYP_2954 NC_005810.1 Protein Homology CDS 3288487 3288942 . + 0 ID=cds2999;Parent=gene3066;Dbxref=Genbank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210360.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3288947 3290399 . + . ID=id617;gbkey=repeat_region NC_005810.1 RefSeq gene 3288959 3289087 . + . ID=gene3067;Name=YP_RS15390;end_range=3289087,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15390;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 3288959 3289087 . + 0 ID=cds3000;Parent=gene3067;end_range=3289087,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=terminase small subunit;pseudo=true;transl_table=11 NC_005810.1 RefSeq region 3289084 3290398 . + . ID=id618;gbkey=mobile_element NC_005810.1 RefSeq gene 3289155 3290363 . + . ID=gene3068;Name=YP_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15395;old_locus_tag=YP2956%2CYP_2956 NC_005810.1 Protein Homology CDS 3289155 3290363 . + 0 ID=cds3001;Parent=gene3068;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 3290367 3290572 . + . ID=gene3069;Name=YP_RS15400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15400;partial=true;pseudo=true;start_range=.,3290367 NC_005810.1 Protein Homology CDS 3290367 3290572 . + 0 ID=cds3002;Parent=gene3069;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=terminase small subunit;pseudo=true;start_range=.,3290367;transl_table=11 NC_005810.1 RefSeq gene 3290550 3290888 . + . ID=gene3070;Name=YP_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15405;old_locus_tag=YP2957%2CYP_2957 NC_005810.1 Protein Homology CDS 3290550 3290888 . + 0 ID=cds3003;Parent=gene3070;Dbxref=Genbank:WP_002217368.1;Name=WP_002217368.1;gbkey=CDS;product=terminase;protein_id=WP_002217368.1;transl_table=11 NC_005810.1 RefSeq gene 3291134 3291210 . - . ID=gene3071;Name=YP_RS15410;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS15410;old_locus_tag=tRNA-Met_6%2CYP_t52 NC_005810.1 tRNAscan-SE tRNA 3291134 3291210 . - . ID=rna62;Parent=gene3071;anticodon=(pos:complement(3291174..3291176));gbkey=tRNA;product=tRNA-Met NC_005810.1 tRNAscan-SE exon 3291134 3291210 . - . ID=id619;Parent=rna62;anticodon=(pos:complement(3291174..3291176));gbkey=tRNA;product=tRNA-Met NC_005810.1 RefSeq gene 3291406 3293244 . - . ID=gene3072;Name=YP_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15415;old_locus_tag=YP2958%2CYP_2958 NC_005810.1 Protein Homology CDS 3291406 3293244 . - 0 ID=cds3004;Parent=gene3072;Dbxref=Genbank:WP_041175920.1;Name=WP_041175920.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_041175920.1;transl_table=11 NC_005810.1 RefSeq gene 3293402 3295150 . - . ID=gene3073;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=YP_RS15420;old_locus_tag=YP2959%2CYP_2959 NC_005810.1 Protein Homology CDS 3293402 3295150 . - 0 ID=cds3005;Parent=gene3073;Dbxref=Genbank:WP_002210358.1;Name=WP_002210358.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NC_005810.1 RefSeq gene 3295286 3295501 . - . ID=gene3074;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YP_RS15425;old_locus_tag=YP2960%2CYP_2960 NC_005810.1 Protein Homology CDS 3295286 3295501 . - 0 ID=cds3006;Parent=gene3074;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NC_005810.1 RefSeq gene 3295907 3296920 . + . ID=gene3075;Name=YP_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15430;old_locus_tag=YP2961%2CYP_2961 NC_005810.1 Protein Homology CDS 3295907 3296920 . + 0 ID=cds3007;Parent=gene3075;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11 NC_005810.1 RefSeq gene 3297037 3297687 . - . ID=gene3076;Name=YP_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15435;old_locus_tag=YP2962%2CYP_2962 NC_005810.1 Protein Homology CDS 3297037 3297687 . - 0 ID=cds3008;Parent=gene3076;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11 NC_005810.1 RefSeq gene 3297795 3298154 . + . ID=gene3077;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YP_RS15440;old_locus_tag=YP2963 NC_005810.1 Protein Homology CDS 3297795 3298154 . + 0 ID=cds3009;Parent=gene3077;Dbxref=Genbank:WP_002212199.1;Name=WP_002212199.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002212199.1;transl_table=11 NC_005810.1 RefSeq gene 3298428 3299246 . + . ID=gene3078;Name=YP_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15445;old_locus_tag=YP2964%2CYP_2964 NC_005810.1 Protein Homology CDS 3298428 3299246 . + 0 ID=cds3010;Parent=gene3078;Dbxref=Genbank:WP_002212198.1;Name=WP_002212198.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_002212198.1;transl_table=11 NC_005810.1 RefSeq gene 3299482 3300720 . - . ID=gene3079;Name=YP_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15450;old_locus_tag=YP2965%2CYP_2965 NC_005810.1 Protein Homology CDS 3299482 3300720 . - 0 ID=cds3011;Parent=gene3079;Dbxref=Genbank:WP_002212197.1;Name=WP_002212197.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_002212197.1;transl_table=11 NC_005810.1 RefSeq gene 3300880 3301503 . - . ID=gene3080;Name=YP_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15455;old_locus_tag=YP2966%2CYP_2966 NC_005810.1 Protein Homology CDS 3300880 3301503 . - 0 ID=cds3012;Parent=gene3080;Dbxref=Genbank:WP_002212196.1;Name=WP_002212196.1;gbkey=CDS;product=signal transduction protein;protein_id=WP_002212196.1;transl_table=11 NC_005810.1 RefSeq gene 3301807 3303114 . + . ID=gene3081;Name=YP_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15460;old_locus_tag=YP2967%2CYP_2967 NC_005810.1 Protein Homology CDS 3301807 3303114 . + 0 ID=cds3013;Parent=gene3081;Dbxref=Genbank:WP_002212195.1;Name=WP_002212195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212195.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3303153 3303200 . + . ID=id620;Note=degenerate repeat region containing 2 copies of a 24bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3303285 3306140 . + . ID=gene3082;Name=YP_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15465;old_locus_tag=YP2968%2CYP_2968 NC_005810.1 Protein Homology CDS 3303285 3306140 . + 0 ID=cds3014;Parent=gene3082;Dbxref=Genbank:WP_002212194.1;Name=WP_002212194.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_002212194.1;transl_table=11 NC_005810.1 RefSeq gene 3306275 3307705 . + . ID=gene3083;Name=YP_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15470;old_locus_tag=YP2969%2CYP_2969 NC_005810.1 Protein Homology CDS 3306275 3307705 . + 0 ID=cds3015;Parent=gene3083;Dbxref=Genbank:WP_002212193.1;Name=WP_002212193.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_002212193.1;transl_table=11 NC_005810.1 RefSeq gene 3307742 3308992 . + . ID=gene3084;Name=YP_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15475;old_locus_tag=YP2970%2CYP_2970 NC_005810.1 Protein Homology CDS 3307742 3308992 . + 0 ID=cds3016;Parent=gene3084;Dbxref=Genbank:WP_002212192.1;Name=WP_002212192.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_002212192.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3309029 3309203 . + . ID=id621;gbkey=repeat_region NC_005810.1 RefSeq gene 3309317 3309598 . - . ID=gene3085;Name=YP_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15480;old_locus_tag=YP2971%2CYP_2971 NC_005810.1 Protein Homology CDS 3309317 3309598 . - 0 ID=cds3017;Parent=gene3085;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11 NC_005810.1 RefSeq gene 3309634 3309978 . - . ID=gene3086;Name=YP_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15485;old_locus_tag=YP2972 NC_005810.1 Protein Homology CDS 3309634 3309978 . - 0 ID=cds3018;Parent=gene3086;Dbxref=Genbank:WP_014465988.1;Name=WP_014465988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014465988.1;transl_table=11 NC_005810.1 RefSeq gene 3310167 3310820 . + . ID=gene3087;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YP_RS15490;old_locus_tag=YP2973%2CYP_2973 NC_005810.1 Protein Homology CDS 3310167 3310820 . + 0 ID=cds3019;Parent=gene3087;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3310919 3310952 . + . ID=id622;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3311279 3312061 . + . ID=gene3088;Name=YP_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15495;old_locus_tag=YP2974%2CYP_2974 NC_005810.1 Protein Homology CDS 3311279 3312061 . + 0 ID=cds3020;Parent=gene3088;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3312073 3312186 . + . ID=id623;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3312196 3312309 . + . ID=id624;gbkey=repeat_region NC_005810.1 RefSeq gene 3312345 3313505 . - . ID=gene3089;Name=YP_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15500;old_locus_tag=YP2975%2CYP_2975 NC_005810.1 Protein Homology CDS 3312345 3313505 . - 0 ID=cds3021;Parent=gene3089;Dbxref=Genbank:WP_002212188.1;Name=WP_002212188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212188.1;transl_table=11 NC_005810.1 RefSeq gene 3313515 3314198 . - . ID=gene3090;Name=YP_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15505;old_locus_tag=YP2976%2CYP_2976 NC_005810.1 Protein Homology CDS 3313515 3314198 . - 0 ID=cds3022;Parent=gene3090;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11 NC_005810.1 RefSeq gene 3314267 3314437 . + . ID=gene3091;Name=YP_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15510;old_locus_tag=YP2977%2CYP_2977 NC_005810.1 Protein Homology CDS 3314267 3314437 . + 0 ID=cds3023;Parent=gene3091;Dbxref=Genbank:WP_002223694.1;Name=WP_002223694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223694.1;transl_table=11 NC_005810.1 RefSeq gene 3314502 3315899 . - . ID=gene3092;Name=YP_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15515;old_locus_tag=YP2978%2CYP_2978 NC_005810.1 Protein Homology CDS 3314502 3315899 . - 0 ID=cds3024;Parent=gene3092;Dbxref=Genbank:WP_002212186.1;Name=WP_002212186.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_002212186.1;transl_table=11 NC_005810.1 RefSeq gene 3316295 3316927 . + . ID=gene3093;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YP_RS15520;old_locus_tag=YP2979%2CYP_2979 NC_005810.1 Protein Homology CDS 3316295 3316927 . + 0 ID=cds3025;Parent=gene3093;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11 NC_005810.1 RefSeq gene 3316961 3317386 . + . ID=gene3094;Name=YP_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15525;old_locus_tag=YP2980%2CYP_2980 NC_005810.1 Protein Homology CDS 3316961 3317386 . + 0 ID=cds3026;Parent=gene3094;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11 NC_005810.1 RefSeq gene 3317468 3318295 . + . ID=gene3095;Name=YP_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15530;old_locus_tag=YP2981%2CYP_2981 NC_005810.1 Protein Homology CDS 3317468 3318295 . + 0 ID=cds3027;Parent=gene3095;Dbxref=Genbank:WP_002217438.1;Name=WP_002217438.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002217438.1;transl_table=11 NC_005810.1 RefSeq gene 3318295 3318876 . + . ID=gene3096;Name=YP_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15535;old_locus_tag=YP2982%2CYP_2982 NC_005810.1 Protein Homology CDS 3318295 3318876 . + 0 ID=cds3028;Parent=gene3096;Dbxref=Genbank:WP_002212182.1;Name=WP_002212182.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_002212182.1;transl_table=11 NC_005810.1 RefSeq gene 3318978 3320873 . + . ID=gene3097;Name=YP_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15540;old_locus_tag=YP2983%2CYP_2983 NC_005810.1 Protein Homology CDS 3318978 3320873 . + 0 ID=cds3029;Parent=gene3097;Dbxref=Genbank:WP_002212181.1;Name=WP_002212181.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NC_005810.1 RefSeq gene 3320877 3321788 . + . ID=gene3098;Name=YP_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15545;old_locus_tag=YP2984%2CYP_2984 NC_005810.1 Protein Homology CDS 3320877 3321788 . + 0 ID=cds3030;Parent=gene3098;Dbxref=Genbank:WP_002212180.1;Name=WP_002212180.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212180.1;transl_table=11 NC_005810.1 RefSeq gene 3321846 3322430 . - . ID=gene3099;Name=YP_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15550;old_locus_tag=YP2985%2CYP_2985 NC_005810.1 Protein Homology CDS 3321846 3322430 . - 0 ID=cds3031;Parent=gene3099;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11 NC_005810.1 RefSeq gene 3322734 3325007 . + . ID=gene3100;Name=YP_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15555;old_locus_tag=YP2987%2CYP_2987 NC_005810.1 Protein Homology CDS 3322734 3325007 . + 0 ID=cds3032;Parent=gene3100;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NC_005810.1 RefSeq gene 3325296 3326027 . + . ID=gene3101;Name=YP_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15560;old_locus_tag=YP2988%2CYP_2988 NC_005810.1 Protein Homology CDS 3325296 3326027 . + 0 ID=cds3033;Parent=gene3101;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11 NC_005810.1 RefSeq gene 3326206 3327630 . + . ID=gene3102;Name=YP_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15565;old_locus_tag=YP2989%2CYP_2989 NC_005810.1 Protein Homology CDS 3326206 3327630 . + 0 ID=cds3034;Parent=gene3102;Dbxref=Genbank:WP_002230599.1;Name=WP_002230599.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_002230599.1;transl_table=11 NC_005810.1 RefSeq gene 3327938 3330282 . + . ID=gene3103;Name=YP_RS15570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15570;old_locus_tag=YP2990;pseudo=true NC_005810.1 Protein Homology CDS 3327938 3330282 . + 0 ID=cds3035;Parent=gene3103;exception=annotated by transcript or proteomic data;gbkey=CDS;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 3330127 3330162 . + . ID=id625;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3330304 3331137 . - . ID=gene3104;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YP_RS15575;old_locus_tag=YP2991%2CYP_2991 NC_005810.1 Protein Homology CDS 3330304 3331137 . - 0 ID=cds3036;Parent=gene3104;Dbxref=Genbank:WP_002212175.1;Name=WP_002212175.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase A;protein_id=WP_002212175.1;transl_table=11 NC_005810.1 RefSeq gene 3331284 3331493 . + . ID=gene3105;Name=YP_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15580;old_locus_tag=YP2992%2CYP_2992 NC_005810.1 Protein Homology CDS 3331284 3331493 . + 0 ID=cds3037;Parent=gene3105;Dbxref=Genbank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11 NC_005810.1 RefSeq gene 3331556 3332713 . - . ID=gene3106;Name=YP_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15585;old_locus_tag=YP2993%2CYP_2993 NC_005810.1 Protein Homology CDS 3331556 3332713 . - 0 ID=cds3038;Parent=gene3106;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11 NC_005810.1 RefSeq gene 3333111 3334004 . + . ID=gene3107;Name=YP_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15590;old_locus_tag=YP2994%2CYP_2994 NC_005810.1 Protein Homology CDS 3333111 3334004 . + 0 ID=cds3039;Parent=gene3107;Dbxref=Genbank:WP_002213786.1;Name=WP_002213786.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NC_005810.1 RefSeq gene 3334096 3334758 . - . ID=gene3108;Name=YP_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15595;old_locus_tag=YP2995%2CYP_2995 NC_005810.1 Protein Homology CDS 3334096 3334758 . - 0 ID=cds3040;Parent=gene3108;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11 NC_005810.1 RefSeq gene 3334951 3336162 . - . ID=gene3109;Name=YP_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15600;old_locus_tag=YP2996%2CYP_2996 NC_005810.1 Protein Homology CDS 3334951 3336162 . - 0 ID=cds3041;Parent=gene3109;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NC_005810.1 RefSeq gene 3336965 3337678 . + . ID=gene3110;Name=YP_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15605;old_locus_tag=YP2997 NC_005810.1 Protein Homology CDS 3336965 3337678 . + 0 ID=cds3042;Parent=gene3110;Dbxref=Genbank:WP_002353766.1;Name=WP_002353766.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_002353766.1;transl_table=11 NC_005810.1 RefSeq gene 3337682 3338113 . + . ID=gene3111;Name=YP_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15610;old_locus_tag=YP2998%2CYP_2998 NC_005810.1 Protein Homology CDS 3337682 3338113 . + 0 ID=cds3043;Parent=gene3111;Dbxref=Genbank:WP_002212170.1;Name=WP_002212170.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_002212170.1;transl_table=11 NC_005810.1 RefSeq gene 3338210 3339766 . - . ID=gene3112;Name=YP_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15615;old_locus_tag=YP2999%2CYP_2999 NC_005810.1 Protein Homology CDS 3338210 3339766 . - 0 ID=cds3044;Parent=gene3112;Dbxref=Genbank:WP_002212169.1;Name=WP_002212169.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212169.1;transl_table=11 NC_005810.1 RefSeq gene 3339791 3340363 . - . ID=gene3113;Name=YP_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15620;old_locus_tag=YP3000%2CYP_3000 NC_005810.1 Protein Homology CDS 3339791 3340363 . - 0 ID=cds3045;Parent=gene3113;Dbxref=Genbank:WP_002212168.1;Name=WP_002212168.1;gbkey=CDS;product=pseudopilin;protein_id=WP_002212168.1;transl_table=11 NC_005810.1 RefSeq gene 3340347 3340820 . - . ID=gene3114;Name=YP_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15625;old_locus_tag=YP3001%2CYP_3001 NC_005810.1 Protein Homology CDS 3340347 3340820 . - 0 ID=cds3046;Parent=gene3114;Dbxref=Genbank:WP_002357277.1;Name=WP_002357277.1;gbkey=CDS;product=pilus biosynthesis protein TadE;protein_id=WP_002357277.1;transl_table=11 NC_005810.1 RefSeq gene 3340817 3341587 . - . ID=gene3115;Name=YP_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15630;old_locus_tag=YP3002%2CYP_3002 NC_005810.1 Protein Homology CDS 3340817 3341587 . - 0 ID=cds3047;Parent=gene3115;Dbxref=Genbank:WP_002212166.1;Name=WP_002212166.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212166.1;transl_table=11 NC_005810.1 RefSeq gene 3341571 3342404 . - . ID=gene3116;Name=YP_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15635;old_locus_tag=YP3003%2CYP_3003 NC_005810.1 Protein Homology CDS 3341571 3342404 . - 0 ID=cds3048;Parent=gene3116;Dbxref=Genbank:WP_002212165.1;Name=WP_002212165.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212165.1;transl_table=11 NC_005810.1 RefSeq gene 3342401 3343276 . - . ID=gene3117;Name=YP_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15640;old_locus_tag=YP3004%2CYP_3004 NC_005810.1 Protein Homology CDS 3342401 3343276 . - 0 ID=cds3049;Parent=gene3117;Dbxref=Genbank:WP_002212164.1;Name=WP_002212164.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212164.1;transl_table=11 NC_005810.1 RefSeq gene 3343273 3344559 . - . ID=gene3118;Name=YP_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15645;old_locus_tag=YP3005%2CYP_3005 NC_005810.1 Protein Homology CDS 3343273 3344559 . - 0 ID=cds3050;Parent=gene3118;Dbxref=Genbank:WP_002213785.1;Name=WP_002213785.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002213785.1;transl_table=11 NC_005810.1 RefSeq gene 3344571 3345698 . - . ID=gene3119;Name=YP_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15650;old_locus_tag=YP3006%2CYP_3006 NC_005810.1 Protein Homology CDS 3344571 3345698 . - 0 ID=cds3051;Parent=gene3119;Dbxref=Genbank:WP_002213784.1;Name=WP_002213784.1;gbkey=CDS;product=pilus assembly protein CpaE;protein_id=WP_002213784.1;transl_table=11 NC_005810.1 RefSeq gene 3345709 3345999 . - . ID=gene3120;Name=YP_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15655 NC_005810.1 Protein Homology CDS 3345709 3345999 . - 0 ID=cds3052;Parent=gene3120;Dbxref=Genbank:WP_002213782.1;Name=WP_002213782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213782.1;transl_table=11 NC_005810.1 RefSeq gene 3345996 3346445 . - . ID=gene3121;Name=YP_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15660 NC_005810.1 Protein Homology CDS 3345996 3346445 . - 0 ID=cds3053;Parent=gene3121;Dbxref=Genbank:WP_002230602.1;Name=WP_002230602.1;gbkey=CDS;product=secretion protein;protein_id=WP_002230602.1;transl_table=11 NC_005810.1 RefSeq gene 3346460 3347314 . - . ID=gene3122;Name=YP_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15665 NC_005810.1 Protein Homology CDS 3346460 3347314 . - 0 ID=cds3054;Parent=gene3122;Dbxref=Genbank:WP_002213778.1;Name=WP_002213778.1;gbkey=CDS;product=pilus assembly protein CpaC;protein_id=WP_002213778.1;transl_table=11 NC_005810.1 RefSeq gene 3347311 3348177 . - . ID=gene3123;Name=YP_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15670;old_locus_tag=YP3008%2CYP_3008 NC_005810.1 Protein Homology CDS 3347311 3348177 . - 0 ID=cds3055;Parent=gene3123;Dbxref=Genbank:WP_002211460.1;Name=WP_002211460.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211460.1;transl_table=11 NC_005810.1 RefSeq gene 3348229 3348651 . - . ID=gene3124;Name=YP_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15675;old_locus_tag=YP3009%2CYP_3009 NC_005810.1 Protein Homology CDS 3348229 3348651 . - 0 ID=cds3056;Parent=gene3124;Dbxref=Genbank:WP_002211459.1;Name=WP_002211459.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211459.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3348702 3349419 . + . ID=id626;gbkey=repeat_region NC_005810.1 RefSeq region 3348706 3349417 . + . ID=id627;gbkey=mobile_element NC_005810.1 RefSeq gene 3348851 3349309 . + . ID=gene3125;Name=YP_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15680;old_locus_tag=YP3010%2CYP_3010 NC_005810.1 Protein Homology CDS 3348851 3349309 . + 0 ID=cds3057;Parent=gene3125;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 3349662 3352141 . + . ID=gene3126;Name=YP_RS15685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15685;old_locus_tag=YP3011;pseudo=true NC_005810.1 Protein Homology CDS 3349662 3352141 . + 0 ID=cds3058;Parent=gene3126;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fimbrial assembly protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 3352157 3352876 . + . ID=gene3127;Name=YP_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15690;old_locus_tag=YP3012%2CYP_3012 NC_005810.1 Protein Homology CDS 3352157 3352876 . + 0 ID=cds3059;Parent=gene3127;Dbxref=Genbank:WP_002211457.1;Name=WP_002211457.1;gbkey=CDS;product=fimbrial chaperone protein;protein_id=WP_002211457.1;transl_table=11 NC_005810.1 RefSeq gene 3352901 3354007 . + . ID=gene3128;Name=YP_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15695;old_locus_tag=YP3013%2CYP_3013 NC_005810.1 Protein Homology CDS 3352901 3354007 . + 0 ID=cds3060;Parent=gene3128;Dbxref=Genbank:WP_002211456.1;Name=WP_002211456.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211456.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3354054 3354191 . + . ID=id628;gbkey=repeat_region NC_005810.1 RefSeq gene 3354219 3355298 . - . ID=gene3129;Name=YP_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15700;old_locus_tag=YP3014%2CYP_3014 NC_005810.1 Protein Homology CDS 3354219 3355298 . - 0 ID=cds3061;Parent=gene3129;Dbxref=Genbank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11 NC_005810.1 RefSeq gene 3356154 3357149 . + . ID=gene3130;Name=YP_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15705;old_locus_tag=YP3015%2CYP_3015 NC_005810.1 Protein Homology CDS 3356154 3357149 . + 0 ID=cds3062;Parent=gene3130;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11 NC_005810.1 RefSeq gene 3357241 3357810 . - . ID=gene3131;Name=YP_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15710;old_locus_tag=YP3016%2CYP_3016 NC_005810.1 Protein Homology CDS 3357241 3357810 . - 0 ID=cds3063;Parent=gene3131;Dbxref=Genbank:WP_002228082.1;Name=WP_002228082.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002228082.1;transl_table=11 NC_005810.1 RefSeq gene 3357995 3360092 . - . ID=gene3132;Name=YP_RS15715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15715;old_locus_tag=YP3017;pseudo=true NC_005810.1 Protein Homology CDS 3357995 3360092 . - 0 ID=cds3064;Parent=gene3132;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 3360079 3361212 . - . ID=gene3133;Name=YP_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15720;old_locus_tag=YP3018%2CYP_3018 NC_005810.1 Protein Homology CDS 3360079 3361212 . - 0 ID=cds3065;Parent=gene3133;Dbxref=Genbank:WP_002211451.1;Name=WP_002211451.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211451.1;transl_table=11 NC_005810.1 RefSeq gene 3361212 3361985 . - . ID=gene3134;Name=YP_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15725;old_locus_tag=YP3019%2CYP_3019 NC_005810.1 Protein Homology CDS 3361212 3361985 . - 0 ID=cds3066;Parent=gene3134;Dbxref=Genbank:WP_002213766.1;Name=WP_002213766.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_002213766.1;transl_table=11 NC_005810.1 RefSeq gene 3361992 3362264 . - . ID=gene3135;Name=YP_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15730;old_locus_tag=YP3020%2CYP_3020 NC_005810.1 Protein Homology CDS 3361992 3362264 . - 0 ID=cds3067;Parent=gene3135;Dbxref=Genbank:WP_002211449.1;Name=WP_002211449.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11 NC_005810.1 RefSeq gene 3362266 3363036 . - . ID=gene3136;Name=YP_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15735;old_locus_tag=YP3021%2CYP_3021 NC_005810.1 Protein Homology CDS 3362266 3363036 . - 0 ID=cds3068;Parent=gene3136;Dbxref=Genbank:WP_002211448.1;Name=WP_002211448.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_002211448.1;transl_table=11 NC_005810.1 RefSeq gene 3363033 3363446 . - . ID=gene3137;Name=YP_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15740;old_locus_tag=YP3022%2CYP_3022 NC_005810.1 Protein Homology CDS 3363033 3363446 . - 0 ID=cds3069;Parent=gene3137;Dbxref=Genbank:WP_002211447.1;Name=WP_002211447.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11 NC_005810.1 RefSeq gene 3363439 3364338 . - . ID=gene3138;Name=YP_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15745;old_locus_tag=YP3023%2CYP_3023 NC_005810.1 Protein Homology CDS 3363439 3364338 . - 0 ID=cds3070;Parent=gene3138;Dbxref=Genbank:WP_002211446.1;Name=WP_002211446.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_002211446.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3363988 3364029 . + . ID=id629;Note=exact repeat region containing 2 copies of a 21 bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3364374 3364433 . + . ID=id630;Note=degenerate repeat region containing 3 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3364861 3365889 . + . ID=gene3139;Name=YP_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15750;old_locus_tag=YP3024%2CYP_3024 NC_005810.1 Protein Homology CDS 3364861 3365889 . + 0 ID=cds3071;Parent=gene3139;Dbxref=Genbank:WP_002211445.1;Name=WP_002211445.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002211445.1;transl_table=11 NC_005810.1 RefSeq gene 3365906 3366286 . + . ID=gene3140;Name=YP_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15755;old_locus_tag=YP3025%2CYP_3025 NC_005810.1 Protein Homology CDS 3365906 3366286 . + 0 ID=cds3072;Parent=gene3140;Dbxref=Genbank:WP_002211444.1;Name=WP_002211444.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_002211444.1;transl_table=11 NC_005810.1 RefSeq gene 3366296 3367936 . + . ID=gene3141;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YP_RS15760;old_locus_tag=YP3026%2CYP_3026 NC_005810.1 Protein Homology CDS 3366296 3367936 . + 0 ID=cds3073;Parent=gene3141;Dbxref=Genbank:WP_002211443.1;Name=WP_002211443.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=WP_002211443.1;transl_table=11 NC_005810.1 RefSeq gene 3367908 3368951 . + . ID=gene3142;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YP_RS15765;old_locus_tag=YP3027%2CYP_3027 NC_005810.1 Protein Homology CDS 3367908 3368951 . + 0 ID=cds3074;Parent=gene3142;Dbxref=Genbank:WP_002211442.1;Name=WP_002211442.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11 NC_005810.1 RefSeq gene 3368956 3369672 . + . ID=gene3143;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YP_RS15770;old_locus_tag=YP3028%2CYP_3028 NC_005810.1 Protein Homology CDS 3368956 3369672 . + 0 ID=cds3075;Parent=gene3143;Dbxref=Genbank:WP_002213763.1;Name=WP_002213763.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_002213763.1;transl_table=11 NC_005810.1 RefSeq gene 3369665 3371005 . + . ID=gene3144;Name=YP_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15775;old_locus_tag=YP3029%2CYP_3029 NC_005810.1 Protein Homology CDS 3369665 3371005 . + 0 ID=cds3076;Parent=gene3144;Dbxref=Genbank:WP_002211440.1;Name=WP_002211440.1;gbkey=CDS;product=flagellum-specific ATP synthase;protein_id=WP_002211440.1;transl_table=11 NC_005810.1 RefSeq gene 3371009 3371446 . + . ID=gene3145;Name=YP_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15780;old_locus_tag=YP3030%2CYP_3030 NC_005810.1 Protein Homology CDS 3371009 3371446 . + 0 ID=cds3077;Parent=gene3145;Dbxref=Genbank:WP_002223686.1;Name=WP_002223686.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_002223686.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3371702 3371729 . + . ID=id631;Note=degenerate repeat region containing 2 copies of a 14bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3371774 3372199 . - . ID=gene3146;Name=YP_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15785;old_locus_tag=YP3031%2CYP_3031 NC_005810.1 Protein Homology CDS 3371774 3372199 . - 0 ID=cds3078;Parent=gene3146;Dbxref=Genbank:WP_002211438.1;Name=WP_002211438.1;gbkey=CDS;product=flagellar protein FlgN;protein_id=WP_002211438.1;transl_table=11 NC_005810.1 RefSeq gene 3372206 3372472 . - . ID=gene3147;Name=YP_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15790;old_locus_tag=YP3032%2CYP_3032 NC_005810.1 Protein Homology CDS 3372206 3372472 . - 0 ID=cds3079;Parent=gene3147;Dbxref=Genbank:WP_002211437.1;Name=WP_002211437.1;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211437.1;transl_table=11 NC_005810.1 RefSeq gene 3372701 3373549 . - . ID=gene3148;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YP_RS15795;old_locus_tag=YP3033%2CYP_3033 NC_005810.1 Protein Homology CDS 3372701 3373549 . - 0 ID=cds3080;Parent=gene3148;Dbxref=Genbank:WP_002211436.1;Name=WP_002211436.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002211436.1;transl_table=11 NC_005810.1 RefSeq gene 3373607 3374053 . + . ID=gene3149;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YP_RS15800;old_locus_tag=YP3034%2CYP_3034 NC_005810.1 Protein Homology CDS 3373607 3374053 . + 0 ID=cds3081;Parent=gene3149;Dbxref=Genbank:WP_002211435.1;Name=WP_002211435.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211435.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3373840 3373893 . + . ID=id632;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region;gene=flgB NC_005810.1 RefSeq gene 3374056 3374481 . + . ID=gene3150;Name=YP_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15805;old_locus_tag=YP3035%2CYP_3035 NC_005810.1 Protein Homology CDS 3374056 3374481 . + 0 ID=cds3082;Parent=gene3150;Dbxref=Genbank:WP_002211434.1;Name=WP_002211434.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11 NC_005810.1 RefSeq gene 3374484 3375140 . + . ID=gene3151;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YP_RS15810;old_locus_tag=YP3036%2CYP_3036 NC_005810.1 Protein Homology CDS 3374484 3375140 . + 0 ID=cds3083;Parent=gene3151;Dbxref=Genbank:WP_002211433.1;Name=WP_002211433.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_002211433.1;transl_table=11 NC_005810.1 RefSeq gene 3375195 3376436 . + . ID=gene3152;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YP_RS15815;old_locus_tag=YP3037%2CYP_3037 NC_005810.1 Protein Homology CDS 3375195 3376436 . + 0 ID=cds3084;Parent=gene3152;Dbxref=Genbank:WP_002211432.1;Name=WP_002211432.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211432.1;transl_table=11 NC_005810.1 RefSeq gene 3376436 3377167 . + . ID=gene3153;Name=YP_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15820;old_locus_tag=YP3038%2CYP_3038 NC_005810.1 Protein Homology CDS 3376436 3377167 . + 0 ID=cds3085;Parent=gene3153;Dbxref=Genbank:WP_002223685.1;Name=WP_002223685.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_002223685.1;transl_table=11 NC_005810.1 RefSeq gene 3377235 3378020 . + . ID=gene3154;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YP_RS15825;old_locus_tag=YP3039%2CYP_3039 NC_005810.1 Protein Homology CDS 3377235 3378020 . + 0 ID=cds3086;Parent=gene3154;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NC_005810.1 RefSeq gene 3378055 3378720 . + . ID=gene3155;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YP_RS15830;old_locus_tag=YP3040%2CYP_3040 NC_005810.1 Protein Homology CDS 3378055 3378720 . + 0 ID=cds3087;Parent=gene3155;Dbxref=Genbank:WP_002211429.1;Name=WP_002211429.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein FlgH;protein_id=WP_002211429.1;transl_table=11 NC_005810.1 RefSeq gene 3378767 3379909 . + . ID=gene3156;Name=YP_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15835;old_locus_tag=YP3041%2CYP_3041 NC_005810.1 Protein Homology CDS 3378767 3379909 . + 0 ID=cds3088;Parent=gene3156;Dbxref=Genbank:WP_042468851.1;Name=WP_042468851.1;gbkey=CDS;product=flagellar P-ring protein FlgI;protein_id=WP_042468851.1;transl_table=11 NC_005810.1 RefSeq gene 3379919 3380212 . + . ID=gene3157;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YP_RS15840;old_locus_tag=YP3042%2CYP_3042 NC_005810.1 Protein Homology CDS 3379919 3380212 . + 0 ID=cds3089;Parent=gene3157;Dbxref=Genbank:WP_002211427.1;Name=WP_002211427.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_002211427.1;transl_table=11 NC_005810.1 RefSeq gene 3380325 3381686 . + . ID=gene3158;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YP_RS15845;old_locus_tag=YP3043%2CYP_3043 NC_005810.1 Protein Homology CDS 3380325 3381686 . + 0 ID=cds3090;Parent=gene3158;Dbxref=Genbank:WP_002211426.1;Name=WP_002211426.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211426.1;transl_table=11 NC_005810.1 RefSeq gene 3381715 3382670 . + . ID=gene3159;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=pseudogene;locus_tag=YP_RS15850;old_locus_tag=YP3044;pseudo=true NC_005810.1 Protein Homology CDS 3381715 3382670 . + 0 ID=cds3091;Parent=gene3159;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=flgL;product=flagellar biosynthesis protein FlgL;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 3381893 3381932 . + . ID=id633;gbkey=repeat_region;gene=flgL NC_005810.1 RefSeq gene 3382682 3383695 . + . ID=gene3160;Name=YP_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15855;old_locus_tag=YP3045%2CYP_3045 NC_005810.1 Protein Homology CDS 3382682 3383695 . + 0 ID=cds3092;Parent=gene3160;Dbxref=Genbank:WP_002211424.1;Name=WP_002211424.1;gbkey=CDS;product=flagellar hook associated protein lafW;protein_id=WP_002211424.1;transl_table=11 NC_005810.1 RefSeq gene 3383859 3384305 . - . ID=gene3161;Name=YP_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15860;old_locus_tag=YP3046%2CYP_3046 NC_005810.1 Protein Homology CDS 3383859 3384305 . - 0 ID=cds3093;Parent=gene3161;Dbxref=Genbank:WP_002211423.1;Name=WP_002211423.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211423.1;transl_table=11 NC_005810.1 RefSeq gene 3384286 3385332 . - . ID=gene3162;Name=YP_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15865;old_locus_tag=YP3047%2CYP_3047 NC_005810.1 Protein Homology CDS 3384286 3385332 . - 0 ID=cds3094;Parent=gene3162;Dbxref=Genbank:WP_002211422.1;Name=WP_002211422.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211422.1;transl_table=11 NC_005810.1 RefSeq gene 3385958 3387159 . + . ID=gene3163;Name=YP_RS15870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15870;old_locus_tag=YP3048;pseudo=true NC_005810.1 Protein Homology CDS 3385958 3387159 . + 0 ID=cds3095;Parent=gene3163;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellin;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 3387379 3388656 . + . ID=gene3164;Name=YP_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15875;old_locus_tag=YP3049%2CYP_3049 NC_005810.1 Protein Homology CDS 3387379 3388656 . + 0 ID=cds3096;Parent=gene3164;Dbxref=Genbank:WP_002211418.1;Name=WP_002211418.1;gbkey=CDS;product=flagellar hook-associated protein;protein_id=WP_002211418.1;transl_table=11 NC_005810.1 RefSeq gene 3388666 3389046 . + . ID=gene3165;Name=YP_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15880;old_locus_tag=YP3050%2CYP_3050 NC_005810.1 Protein Homology CDS 3388666 3389046 . + 0 ID=cds3097;Parent=gene3165;Dbxref=Genbank:WP_002211417.1;Name=WP_002211417.1;gbkey=CDS;product=flagellar export chaperone FliS;protein_id=WP_002211417.1;transl_table=11 NC_005810.1 RefSeq gene 3389048 3389374 . + . ID=gene3166;Name=YP_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15885;old_locus_tag=YP3051%2CYP_3051 NC_005810.1 Protein Homology CDS 3389048 3389374 . + 0 ID=cds3098;Parent=gene3166;Dbxref=Genbank:WP_002211416.1;Name=WP_002211416.1;gbkey=CDS;product=flagellar protein lafD;protein_id=WP_002211416.1;transl_table=11 NC_005810.1 RefSeq gene 3389376 3390515 . + . ID=gene3167;Name=YP_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15890;old_locus_tag=YP3052%2CYP_3052 NC_005810.1 Protein Homology CDS 3389376 3390515 . + 0 ID=cds3099;Parent=gene3167;Dbxref=Genbank:WP_011171928.1;Name=WP_011171928.1;gbkey=CDS;product=flagellar hook-length control protein;protein_id=WP_011171928.1;transl_table=11 NC_005810.1 RefSeq gene 3390554 3391024 . + . ID=gene3168;Name=YP_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15895;old_locus_tag=YP3053%2CYP_3053 NC_005810.1 Protein Homology CDS 3390554 3391024 . + 0 ID=cds3100;Parent=gene3168;Dbxref=Genbank:WP_002211414.1;Name=WP_002211414.1;gbkey=CDS;product=flagellar protein;protein_id=WP_002211414.1;transl_table=11 NC_005810.1 RefSeq gene 3391030 3391725 . + . ID=gene3169;Name=YP_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15900;old_locus_tag=YP3054%2CYP_3054 NC_005810.1 Protein Homology CDS 3391030 3391725 . + 0 ID=cds3101;Parent=gene3169;Dbxref=Genbank:WP_002211413.1;Name=WP_002211413.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;product=DNA-directed RNA polymerase sigma-70 factor;protein_id=WP_002211413.1;transl_table=11 NC_005810.1 RefSeq gene 3391741 3392610 . + . ID=gene3170;Name=YP_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15905;old_locus_tag=YP3055%2CYP_3055 NC_005810.1 Protein Homology CDS 3391741 3392610 . + 0 ID=cds3102;Parent=gene3170;Dbxref=Genbank:WP_011171930.1;Name=WP_011171930.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_011171930.1;transl_table=11 NC_005810.1 RefSeq gene 3392610 3393521 . + . ID=gene3171;Name=YP_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15910;old_locus_tag=YP3056%2CYP_3056 NC_005810.1 Protein Homology CDS 3392610 3393521 . + 0 ID=cds3103;Parent=gene3171;Dbxref=Genbank:WP_002211411.1;Name=WP_002211411.1;gbkey=CDS;product=flagellar motor protein B;protein_id=WP_002211411.1;transl_table=11 NC_005810.1 RefSeq gene 3393590 3393778 . + . ID=gene3172;Name=YP_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15915;old_locus_tag=YP3057%2CYP_3057 NC_005810.1 Protein Homology CDS 3393590 3393778 . + 0 ID=cds3104;Parent=gene3172;Dbxref=Genbank:WP_002213749.1;Name=WP_002213749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213749.1;transl_table=11 NC_005810.1 RefSeq gene 3393981 3394577 . + . ID=gene3173;Name=YP_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15920;old_locus_tag=YP3058%2CYP_3058 NC_005810.1 Protein Homology CDS 3393981 3394577 . + 0 ID=cds3105;Parent=gene3173;Dbxref=Genbank:WP_002211410.1;Name=WP_002211410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211410.1;transl_table=11 NC_005810.1 RefSeq gene 3394574 3395029 . + . ID=gene3174;Name=YP_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15925;old_locus_tag=YP3059%2CYP_3059 NC_005810.1 Protein Homology CDS 3394574 3395029 . + 0 ID=cds3106;Parent=gene3174;Dbxref=Genbank:WP_002211409.1;Name=WP_002211409.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211409.1;transl_table=11 NC_005810.1 RefSeq gene 3395127 3395384 . + . ID=gene3175;Name=YP_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15930;old_locus_tag=YP3060 NC_005810.1 Protein Homology CDS 3395127 3395384 . + 0 ID=cds3107;Parent=gene3175;Dbxref=Genbank:WP_002353780.1;Name=WP_002353780.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353780.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3395169 3395198 . + . ID=id634;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3395410 3395437 . + . ID=id635;gbkey=repeat_region NC_005810.1 RefSeq gene 3395530 3395998 . - . ID=gene3176;Name=YP_RS15935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15935;old_locus_tag=YP3061;pseudo=true NC_005810.1 Protein Homology CDS 3395530 3395998 . - 0 ID=cds3108;Parent=gene3176;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 3396248 3396550 . - . ID=gene3177;Name=YP_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15940;old_locus_tag=YP3062%2CYP_3062 NC_005810.1 Protein Homology CDS 3396248 3396550 . - 0 ID=cds3109;Parent=gene3177;Dbxref=Genbank:WP_002230614.1;Name=WP_002230614.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230614.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3396709 3396876 . + . ID=id636;Note=degenerate repeat region containing 28 copies of a 6bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3397090 3398532 . + . ID=id637;gbkey=repeat_region NC_005810.1 RefSeq region 3397091 3398532 . + . ID=id638;gbkey=mobile_element NC_005810.1 RefSeq gene 3397145 3397660 . + . ID=gene3178;Name=YP_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15945;old_locus_tag=YP3063%2CYP_3063 NC_005810.1 Protein Homology CDS 3397145 3397660 . + 0 ID=cds3110;Parent=gene3178;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_005810.1 RefSeq gene 3397714 3398312 . + . ID=gene3179;Name=YP_RS15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15950;old_locus_tag=YP3064;pseudo=true NC_005810.1 Protein Homology CDS 3397714 3398312 . + 0 ID=cds3111;Parent=gene3179;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 3398503 3399615 . - . ID=gene3180;Name=YP_RS15955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS15955;old_locus_tag=YP3065;partial=true;pseudo=true;start_range=.,3398503 NC_005810.1 Protein Homology CDS 3398503 3399615 . - 0 ID=cds3112;Parent=gene3180;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type VI secretion protein;pseudo=true;start_range=.,3398503;transl_table=11 NC_005810.1 RefSeq gene 3399615 3400055 . - . ID=gene3181;Name=YP_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15960;old_locus_tag=YP3066%2CYP_3066 NC_005810.1 Protein Homology CDS 3399615 3400055 . - 0 ID=cds3113;Parent=gene3181;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11 NC_005810.1 RefSeq gene 3400062 3401543 . - . ID=gene3182;Name=YP_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15965;old_locus_tag=YP3067%2CYP_3067 NC_005810.1 Protein Homology CDS 3400062 3401543 . - 0 ID=cds3114;Parent=gene3182;Dbxref=Genbank:WP_002230616.1;Name=WP_002230616.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002230616.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3401565 3401624 . + . ID=id639;Note=degenerate repeat region containing 3 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3401611 3402108 . - . ID=gene3183;Name=YP_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15970;old_locus_tag=YP3068%2CYP_3068 NC_005810.1 Protein Homology CDS 3401611 3402108 . - 0 ID=cds3115;Parent=gene3183;Dbxref=Genbank:WP_002212098.1;Name=WP_002212098.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212098.1;transl_table=11 NC_005810.1 RefSeq gene 3402632 3403150 . + . ID=gene3184;Name=YP_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15975;old_locus_tag=YP3069%2CYP_3069 NC_005810.1 Protein Homology CDS 3402632 3403150 . + 0 ID=cds3116;Parent=gene3184;Dbxref=Genbank:WP_002212097.1;Name=WP_002212097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212097.1;transl_table=11 NC_005810.1 RefSeq gene 3403302 3403580 . - . ID=gene3185;Name=YP_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15980;old_locus_tag=YP3070 NC_005810.1 Protein Homology CDS 3403302 3403580 . - 0 ID=cds3117;Parent=gene3185;Dbxref=Genbank:WP_002212095.1;Name=WP_002212095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212095.1;transl_table=11 NC_005810.1 RefSeq gene 3404051 3404962 . - . ID=gene3186;Name=YP_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15985;old_locus_tag=YP3072%2CYP_3072 NC_005810.1 Protein Homology CDS 3404051 3404962 . - 0 ID=cds3118;Parent=gene3186;Dbxref=Genbank:WP_002212093.1;Name=WP_002212093.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_002212093.1;transl_table=11 NC_005810.1 RefSeq gene 3405203 3406474 . - . ID=gene3187;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=YP_RS15990;old_locus_tag=YP3073%2CYP_3073 NC_005810.1 Protein Homology CDS 3405203 3406474 . - 0 ID=cds3119;Parent=gene3187;Dbxref=Genbank:WP_002212092.1;Name=WP_002212092.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NC_005810.1 RefSeq gene 3406545 3407654 . - . ID=gene3188;Name=YP_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS15995;old_locus_tag=YP3074%2CYP_3074 NC_005810.1 Protein Homology CDS 3406545 3407654 . - 0 ID=cds3120;Parent=gene3188;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NC_005810.1 RefSeq gene 3407658 3407894 . - . ID=gene3189;Name=YP_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16000;old_locus_tag=YP3075 NC_005810.1 Protein Homology CDS 3407658 3407894 . - 0 ID=cds3121;Parent=gene3189;Dbxref=Genbank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11 NC_005810.1 RefSeq gene 3408482 3409693 . + . ID=gene3190;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YP_RS16005;old_locus_tag=YP3076%2CYP_3076 NC_005810.1 Protein Homology CDS 3408482 3409693 . + 0 ID=cds3122;Parent=gene3190;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11 NC_005810.1 RefSeq gene 3409880 3411457 . + . ID=gene3191;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YP_RS16010;old_locus_tag=YP3077%2CYP_3077 NC_005810.1 Protein Homology CDS 3409880 3411457 . + 0 ID=cds3123;Parent=gene3191;Dbxref=Genbank:WP_002212088.1;Name=WP_002212088.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_002212088.1;transl_table=11 NC_005810.1 RefSeq gene 3411471 3412361 . + . ID=gene3192;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YP_RS16015;old_locus_tag=YP3078%2CYP_3078 NC_005810.1 Protein Homology CDS 3411471 3412361 . + 0 ID=cds3124;Parent=gene3192;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11 NC_005810.1 RefSeq gene 3412504 3412911 . - . ID=gene3193;Name=YP_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16020;old_locus_tag=YP3079%2CYP_3079 NC_005810.1 Protein Homology CDS 3412504 3412911 . - 0 ID=cds3125;Parent=gene3193;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11 NC_005810.1 RefSeq gene 3413046 3414692 . - . ID=gene3194;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YP_RS16025;old_locus_tag=YP3080%2CYP_3080 NC_005810.1 Protein Homology CDS 3413046 3414692 . - 0 ID=cds3126;Parent=gene3194;Dbxref=Genbank:WP_011171931.1;Name=WP_011171931.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_011171931.1;transl_table=11 NC_005810.1 RefSeq gene 3415063 3416448 . + . ID=gene3195;Name=YP_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16030;old_locus_tag=YP3081%2CYP_3081 NC_005810.1 Protein Homology CDS 3415063 3416448 . + 0 ID=cds3127;Parent=gene3195;Dbxref=Genbank:WP_002212084.1;Name=WP_002212084.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_002212084.1;transl_table=11 NC_005810.1 RefSeq gene 3416929 3417279 . + . ID=gene3196;Name=YP_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16035 NC_005810.1 Protein Homology CDS 3416929 3417279 . + 0 ID=cds3128;Parent=gene3196;Dbxref=Genbank:WP_041175921.1;Name=WP_041175921.1;gbkey=CDS;product=hemolysin activator protein;protein_id=WP_041175921.1;transl_table=11 NC_005810.1 RefSeq gene 3417245 3418708 . + . ID=gene3197;Name=YP_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16040;old_locus_tag=YP3082 NC_005810.1 Protein Homology CDS 3417245 3418708 . + 0 ID=cds3129;Parent=gene3197;Dbxref=Genbank:WP_002230618.1;Name=WP_002230618.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002230618.1;transl_table=11 NC_005810.1 RefSeq gene 3418778 3423685 . + . ID=gene3198;Name=YP_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16045;old_locus_tag=YP3083%2CYP_3083 NC_005810.1 Protein Homology CDS 3418778 3423685 . + 0 ID=cds3130;Parent=gene3198;Dbxref=Genbank:WP_002212081.1;Name=WP_002212081.1;gbkey=CDS;product=hemolysin;protein_id=WP_002212081.1;transl_table=11 NC_005810.1 RefSeq gene 3423781 3427476 . - . ID=gene3199;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YP_RS16050;old_locus_tag=YP3084%2CYP_3084 NC_005810.1 Protein Homology CDS 3423781 3427476 . - 0 ID=cds3131;Parent=gene3199;Dbxref=Genbank:WP_002212080.1;Name=WP_002212080.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_002212080.1;transl_table=11 NC_005810.1 RefSeq gene 3427691 3428533 . + . ID=gene3200;Name=YP_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16055;old_locus_tag=YP3085%2CYP_3085 NC_005810.1 Protein Homology CDS 3427691 3428533 . + 0 ID=cds3132;Parent=gene3200;Dbxref=Genbank:WP_002230619.1;Name=WP_002230619.1;Note=regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002230619.1;transl_table=11 NC_005810.1 RefSeq gene 3428653 3430380 . - . ID=gene3201;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YP_RS16060;old_locus_tag=YP3086%2CYP_3086 NC_005810.1 Protein Homology CDS 3428653 3430380 . - 0 ID=cds3133;Parent=gene3201;Dbxref=Genbank:WP_002212079.1;Name=WP_002212079.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_002212079.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3430418 3430592 . + . ID=id640;gbkey=repeat_region NC_005810.1 RefSeq gene 3430636 3431943 . - . ID=gene3202;Name=YP_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16065;old_locus_tag=YP3087%2CYP_3087 NC_005810.1 Protein Homology CDS 3430636 3431943 . - 0 ID=cds3134;Parent=gene3202;Dbxref=Genbank:WP_002212078.1;Name=WP_002212078.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_002212078.1;transl_table=11 NC_005810.1 RefSeq gene 3431990 3433588 . - . ID=gene3203;Name=YP_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16070;old_locus_tag=YP3088%2CYP_3088 NC_005810.1 Protein Homology CDS 3431990 3433588 . - 0 ID=cds3135;Parent=gene3203;Dbxref=Genbank:WP_002212077.1;Name=WP_002212077.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_002212077.1;transl_table=11 NC_005810.1 RefSeq gene 3434009 3434938 . - . ID=gene3204;Name=YP_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16075;old_locus_tag=YP3089%2CYP_3089 NC_005810.1 Protein Homology CDS 3434009 3434938 . - 0 ID=cds3136;Parent=gene3204;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11 NC_005810.1 RefSeq gene 3435006 3435278 . + . ID=gene3205;Name=YP_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16080 NC_005810.1 Protein Homology CDS 3435006 3435278 . + 0 ID=cds3137;Parent=gene3205;Dbxref=Genbank:WP_002430138.1;Name=WP_002430138.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430138.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3435668 3435801 . + . ID=id641;gbkey=repeat_region NC_005810.1 RefSeq gene 3435678 3435793 . - . ID=gene3206;Name=YP_RS16085;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS16085;old_locus_tag=5S_rRNA_5%2CYP_r13 NC_005810.1 cmsearch rRNA 3435678 3435793 . - . ID=rna63;Parent=gene3206;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 3435678 3435793 . - . ID=id642;Parent=rna63;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq gene 3435834 3435909 . - . ID=gene3207;Name=YP_RS16090;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16090;old_locus_tag=tRNA-Thr_2%2CYP_t53 NC_005810.1 tRNAscan-SE tRNA 3435834 3435909 . - . ID=rna64;Parent=gene3207;anticodon=(pos:complement(3435874..3435876));gbkey=tRNA;product=tRNA-Thr NC_005810.1 tRNAscan-SE exon 3435834 3435909 . - . ID=id643;Parent=rna64;anticodon=(pos:complement(3435874..3435876));gbkey=tRNA;product=tRNA-Thr NC_005810.1 RefSeq repeat_region 3435918 3441492 . + . ID=id644;gbkey=repeat_region NC_005810.1 RefSeq gene 3435925 3436040 . - . ID=gene3208;Name=YP_RS16095;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS16095 NC_005810.1 cmsearch rRNA 3435925 3436040 . - . ID=rna65;Parent=gene3208;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 3435925 3436040 . - . ID=id645;Parent=rna65;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq gene 3436132 3439065 . - . ID=gene3209;Name=YP_RS16100;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS16100;old_locus_tag=23S_rRNA_5%2CYP_r15 NC_005810.1 RefSeq rRNA 3436132 3439065 . - . ID=rna66;Parent=gene3209;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq exon 3436132 3439065 . - . ID=id646;Parent=rna66;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq gene 3439275 3439350 . - . ID=gene3210;Name=YP_RS16105;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16105;old_locus_tag=tRNA-Ala_4%2CYP_t54 NC_005810.1 tRNAscan-SE tRNA 3439275 3439350 . - . ID=rna67;Parent=gene3210;anticodon=(pos:complement(3439315..3439317));gbkey=tRNA;product=tRNA-Ala NC_005810.1 tRNAscan-SE exon 3439275 3439350 . - . ID=id647;Parent=rna67;anticodon=(pos:complement(3439315..3439317));gbkey=tRNA;product=tRNA-Ala NC_005810.1 RefSeq gene 3439402 3439478 . - . ID=gene3211;Name=YP_RS16110;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16110;old_locus_tag=tRNA-Ile_3%2CYP_t55 NC_005810.1 tRNAscan-SE tRNA 3439402 3439478 . - . ID=rna68;Parent=gene3211;anticodon=(pos:complement(3439442..3439444));gbkey=tRNA;product=tRNA-Ile NC_005810.1 tRNAscan-SE exon 3439402 3439478 . - . ID=id648;Parent=rna68;anticodon=(pos:complement(3439442..3439444));gbkey=tRNA;product=tRNA-Ile NC_005810.1 RefSeq gene 3439578 3441126 . - . ID=gene3212;Name=YP_RS16115;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS16115;old_locus_tag=16S_rRNA_5%2CYP_r16 NC_005810.1 RefSeq rRNA 3439578 3441126 . - . ID=rna69;Parent=gene3212;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq exon 3439578 3441126 . - . ID=id649;Parent=rna69;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq gene 3441394 3441624 . - . ID=gene3213;Name=YP_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22280 NC_005810.1 Protein Homology CDS 3441394 3441624 . - 0 ID=cds3138;Parent=gene3213;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11 NC_005810.1 RefSeq gene 3441782 3443371 . + . ID=gene3214;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YP_RS16125;old_locus_tag=YP3091%2CYP_3091 NC_005810.1 Protein Homology CDS 3441782 3443371 . + 0 ID=cds3139;Parent=gene3214;Dbxref=Genbank:WP_002210692.1;Name=WP_002210692.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_002210692.1;transl_table=11 NC_005810.1 RefSeq gene 3443431 3444717 . + . ID=gene3215;Name=YP_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16130;old_locus_tag=YP3092%2CYP_3092 NC_005810.1 Protein Homology CDS 3443431 3444717 . + 0 ID=cds3140;Parent=gene3215;Dbxref=Genbank:WP_002210691.1;Name=WP_002210691.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_002210691.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3444827 3444883 . + . ID=id650;Note=degenerate repeat region containing 3 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3444884 3445537 . - . ID=gene3216;Name=YP_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16135;old_locus_tag=YP3093%2CYP_3093 NC_005810.1 Protein Homology CDS 3444884 3445537 . - 0 ID=cds3141;Parent=gene3216;Dbxref=Genbank:WP_002355296.1;Name=WP_002355296.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355296.1;transl_table=11 NC_005810.1 RefSeq gene 3445587 3445862 . - . ID=gene3217;Name=YP_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16140;old_locus_tag=YP3094%2CYP_3094 NC_005810.1 Protein Homology CDS 3445587 3445862 . - 0 ID=cds3142;Parent=gene3217;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11 NC_005810.1 RefSeq gene 3446051 3446641 . - . ID=gene3218;Name=YP_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16145;old_locus_tag=YP3095%2CYP_3095 NC_005810.1 Protein Homology CDS 3446051 3446641 . - 0 ID=cds3143;Parent=gene3218;Dbxref=Genbank:WP_002230622.1;Name=WP_002230622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230622.1;transl_table=11 NC_005810.1 RefSeq gene 3446687 3447391 . - . ID=gene3219;Name=YP_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16150;old_locus_tag=YP3096%2CYP_3096 NC_005810.1 Protein Homology CDS 3446687 3447391 . - 0 ID=cds3144;Parent=gene3219;Dbxref=Genbank:WP_002217884.1;Name=WP_002217884.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_002217884.1;transl_table=11 NC_005810.1 RefSeq gene 3447457 3448524 . - . ID=gene3220;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YP_RS16155;old_locus_tag=YP3097%2CYP_3097 NC_005810.1 Protein Homology CDS 3447457 3448524 . - 0 ID=cds3145;Parent=gene3220;Dbxref=Genbank:WP_002210686.1;Name=WP_002210686.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_002210686.1;transl_table=11 NC_005810.1 RefSeq gene 3448643 3449386 . - . ID=gene3221;Name=YP_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16160;old_locus_tag=YP3098%2CYP_3098 NC_005810.1 Protein Homology CDS 3448643 3449386 . - 0 ID=cds3146;Parent=gene3221;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11 NC_005810.1 RefSeq gene 3449521 3450303 . - . ID=gene3222;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YP_RS16165;old_locus_tag=YP3099%2CYP_3099 NC_005810.1 Protein Homology CDS 3449521 3450303 . - 0 ID=cds3147;Parent=gene3222;Dbxref=Genbank:WP_002210684.1;Name=WP_002210684.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_002210684.1;transl_table=11 NC_005810.1 RefSeq gene 3450400 3450909 . + . ID=gene3223;Name=YP_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16170;old_locus_tag=YP3100%2CYP_3100 NC_005810.1 Protein Homology CDS 3450400 3450909 . + 0 ID=cds3148;Parent=gene3223;Dbxref=Genbank:WP_002210683.1;Name=WP_002210683.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_002210683.1;transl_table=11 NC_005810.1 RefSeq gene 3451032 3451292 . + . ID=gene3224;Name=YP_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16175;old_locus_tag=YP3101%2CYP_3101 NC_005810.1 Protein Homology CDS 3451032 3451292 . + 0 ID=cds3149;Parent=gene3224;Dbxref=Genbank:WP_002228187.1;Name=WP_002228187.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228187.1;transl_table=11 NC_005810.1 RefSeq gene 3451285 3453330 . + . ID=gene3225;Name=YP_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16180;old_locus_tag=YP3102%2CYP_3102 NC_005810.1 Protein Homology CDS 3451285 3453330 . + 0 ID=cds3150;Parent=gene3225;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11 NC_005810.1 RefSeq gene 3453317 3453991 . + . ID=gene3226;Name=YP_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16185;old_locus_tag=YP3103%2CYP_3103 NC_005810.1 Protein Homology CDS 3453317 3453991 . + 0 ID=cds3151;Parent=gene3226;Dbxref=Genbank:WP_002210681.1;Name=WP_002210681.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_002210681.1;transl_table=11 NC_005810.1 RefSeq gene 3453981 3454778 . + . ID=gene3227;Name=YP_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16190;old_locus_tag=YP3104%2CYP_3104 NC_005810.1 Protein Homology CDS 3453981 3454778 . + 0 ID=cds3152;Parent=gene3227;Dbxref=Genbank:WP_002210680.1;Name=WP_002210680.1;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=WP_002210680.1;transl_table=11 NC_005810.1 RefSeq gene 3454775 3454990 . + . ID=gene3228;Name=YP_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16195;old_locus_tag=YP3105 NC_005810.1 Protein Homology CDS 3454775 3454990 . + 0 ID=cds3153;Parent=gene3228;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11 NC_005810.1 RefSeq gene 3454992 3455807 . + . ID=gene3229;Name=YP_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16200;old_locus_tag=YP3106%2CYP_3106 NC_005810.1 Protein Homology CDS 3454992 3455807 . + 0 ID=cds3154;Parent=gene3229;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NC_005810.1 RefSeq gene 3455800 3456930 . + . ID=gene3230;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YP_RS16205;old_locus_tag=YP3107%2CYP_3107 NC_005810.1 Protein Homology CDS 3455800 3456930 . + 0 ID=cds3155;Parent=gene3230;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11 NC_005810.1 RefSeq gene 3456973 3457086 . - . ID=gene3231;Name=YP_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16210;old_locus_tag=YP3108%2CYP_3108 NC_005810.1 Protein Homology CDS 3456973 3457086 . - 0 ID=cds3156;Parent=gene3231;Dbxref=Genbank:WP_002224232.1;Name=WP_002224232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224232.1;transl_table=11 NC_005810.1 RefSeq gene 3457236 3461456 . - . ID=gene3232;Name=YP_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16215;old_locus_tag=YP3109%2CYP_3109 NC_005810.1 Protein Homology CDS 3457236 3461456 . - 0 ID=cds3157;Parent=gene3232;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NC_005810.1 RefSeq gene 3461585 3465613 . - . ID=gene3233;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YP_RS16220;old_locus_tag=YP3110%2CYP_3110 NC_005810.1 Protein Homology CDS 3461585 3465613 . - 0 ID=cds3158;Parent=gene3233;Dbxref=Genbank:WP_002210676.1;Name=WP_002210676.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002210676.1;transl_table=11 NC_005810.1 RefSeq gene 3465956 3466324 . - . ID=gene3234;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YP_RS16225;old_locus_tag=YP3111%2CYP_3111 NC_005810.1 Protein Homology CDS 3465956 3466324 . - 0 ID=cds3159;Parent=gene3234;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NC_005810.1 RefSeq gene 3466391 3466888 . - . ID=gene3235;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YP_RS16230;old_locus_tag=YP3112%2CYP_3112 NC_005810.1 Protein Homology CDS 3466391 3466888 . - 0 ID=cds3160;Parent=gene3235;Dbxref=Genbank:WP_002210674.1;Name=WP_002210674.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NC_005810.1 RefSeq gene 3467253 3467957 . - . ID=gene3236;Name=YP_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16235;old_locus_tag=YP3113%2CYP_3113 NC_005810.1 Protein Homology CDS 3467253 3467957 . - 0 ID=cds3161;Parent=gene3236;Dbxref=Genbank:WP_002210673.1;Name=WP_002210673.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NC_005810.1 RefSeq gene 3467961 3468389 . - . ID=gene3237;Name=YP_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16240;old_locus_tag=YP3114%2CYP_3114 NC_005810.1 Protein Homology CDS 3467961 3468389 . - 0 ID=cds3162;Parent=gene3237;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NC_005810.1 RefSeq gene 3468580 3469125 . - . ID=gene3238;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YP_RS16245;old_locus_tag=YP3115%2CYP_3115 NC_005810.1 Protein Homology CDS 3468580 3469125 . - 0 ID=cds3163;Parent=gene3238;Dbxref=Genbank:WP_002210671.1;Name=WP_002210671.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NC_005810.1 RefSeq gene 3469127 3469510 . - . ID=gene3239;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=YP_RS16250;old_locus_tag=YP3116%2CYP_3116 NC_005810.1 Protein Homology CDS 3469127 3469510 . - 0 ID=cds3164;Parent=gene3239;Dbxref=Genbank:WP_002210670.1;Name=WP_002210670.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NC_005810.1 RefSeq gene 3469761 3470945 . - . ID=gene3240;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YP_RS16255;old_locus_tag=YP3117%2CYP_3117 NC_005810.1 Protein Homology CDS 3469761 3470945 . - 0 ID=cds3165;Parent=gene3240;Dbxref=Genbank:WP_002210669.1;Name=WP_002210669.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NC_005810.1 RefSeq gene 3471054 3471129 . - . ID=gene3241;Name=YP_RS16260;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16260;old_locus_tag=tRNA-Thr_3%2CYP_56 NC_005810.1 tRNAscan-SE tRNA 3471054 3471129 . - . ID=rna70;Parent=gene3241;anticodon=(pos:complement(3471094..3471096));gbkey=tRNA;product=tRNA-Thr NC_005810.1 tRNAscan-SE exon 3471054 3471129 . - . ID=id651;Parent=rna70;anticodon=(pos:complement(3471094..3471096));gbkey=tRNA;product=tRNA-Thr NC_005810.1 RefSeq gene 3471136 3471210 . - . ID=gene3242;Name=YP_RS16265;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16265;old_locus_tag=tRNA-Gly_3%2CYP_57 NC_005810.1 tRNAscan-SE tRNA 3471136 3471210 . - . ID=rna71;Parent=gene3242;anticodon=(pos:complement(3471175..3471177));gbkey=tRNA;product=tRNA-Gly NC_005810.1 tRNAscan-SE exon 3471136 3471210 . - . ID=id652;Parent=rna71;anticodon=(pos:complement(3471175..3471177));gbkey=tRNA;product=tRNA-Gly NC_005810.1 RefSeq gene 3471360 3471444 . - . ID=gene3243;Name=YP_RS16270;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16270;old_locus_tag=tRNA-Tyr_2%2CYP_58 NC_005810.1 tRNAscan-SE tRNA 3471360 3471444 . - . ID=rna72;Parent=gene3243;anticodon=(pos:complement(3471408..3471410));gbkey=tRNA;product=tRNA-Tyr NC_005810.1 tRNAscan-SE exon 3471360 3471444 . - . ID=id653;Parent=rna72;anticodon=(pos:complement(3471408..3471410));gbkey=tRNA;product=tRNA-Tyr NC_005810.1 RefSeq gene 3471463 3471538 . - . ID=gene3244;Name=YP_RS16275;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16275;old_locus_tag=tRNA-Thr_4%2CYP_59 NC_005810.1 tRNAscan-SE tRNA 3471463 3471538 . - . ID=rna73;Parent=gene3244;anticodon=(pos:complement(3471503..3471505));gbkey=tRNA;product=tRNA-Thr NC_005810.1 tRNAscan-SE exon 3471463 3471538 . - . ID=id654;Parent=rna73;anticodon=(pos:complement(3471503..3471505));gbkey=tRNA;product=tRNA-Thr NC_005810.1 RefSeq repeat_region 3471936 3473631 . + . ID=id655;gbkey=repeat_region NC_005810.1 RefSeq region 3471936 3473387 . - . ID=id656;gbkey=mobile_element NC_005810.1 RefSeq gene 3471979 3472764 . - . ID=gene3245;Name=YP_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16280;old_locus_tag=YP3119%2CYP_3119 NC_005810.1 Protein Homology CDS 3471979 3472764 . - 0 ID=cds3166;Parent=gene3245;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_005810.1 RefSeq gene 3472818 3473333 . - . ID=gene3246;Name=YP_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16285;old_locus_tag=YP3120%2CYP_3120 NC_005810.1 Protein Homology CDS 3472818 3473333 . - 0 ID=cds3167;Parent=gene3246;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_005810.1 RefSeq gene 3474075 3476711 . - . ID=gene3247;Name=YP_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16290;old_locus_tag=YP3121%2CYP_3121 NC_005810.1 Protein Homology CDS 3474075 3476711 . - 0 ID=cds3168;Parent=gene3247;Dbxref=Genbank:WP_011171932.1;Name=WP_011171932.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_011171932.1;transl_table=11 NC_005810.1 RefSeq gene 3477085 3478248 . - . ID=gene3248;Name=YP_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16295;old_locus_tag=YP3122%2CYP_3122 NC_005810.1 Protein Homology CDS 3477085 3478248 . - 0 ID=cds3169;Parent=gene3248;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NC_005810.1 RefSeq gene 3478499 3479503 . + . ID=gene3249;Name=YP_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16300;old_locus_tag=YP3123%2CYP_3123 NC_005810.1 Protein Homology CDS 3478499 3479503 . + 0 ID=cds3170;Parent=gene3249;Dbxref=Genbank:WP_002209489.1;Name=WP_002209489.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002209489.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3479623 3479652 . + . ID=id657;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3479672 3480445 . + . ID=gene3250;Name=YP_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16305;old_locus_tag=YP3124%2CYP_3124 NC_005810.1 Protein Homology CDS 3479672 3480445 . + 0 ID=cds3171;Parent=gene3250;Dbxref=Genbank:WP_002209488.1;Name=WP_002209488.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_002209488.1;transl_table=11 NC_005810.1 RefSeq gene 3480612 3481985 . + . ID=gene3251;Name=YP_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16310;old_locus_tag=YP3125%2CYP_3125 NC_005810.1 Protein Homology CDS 3480612 3481985 . + 0 ID=cds3172;Parent=gene3251;Dbxref=Genbank:WP_002209487.1;Name=WP_002209487.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11 NC_005810.1 RefSeq gene 3482148 3482273 . - . ID=gene3252;Name=YP_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16315 NC_005810.1 Protein Homology CDS 3482148 3482273 . - 0 ID=cds3173;Parent=gene3252;Dbxref=Genbank:WP_002209486.1;Name=WP_002209486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209486.1;transl_table=11 NC_005810.1 RefSeq gene 3482584 3485076 . + . ID=gene3253;Name=YP_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16320;old_locus_tag=YP3126%2CYP_3126 NC_005810.1 Protein Homology CDS 3482584 3485076 . + 0 ID=cds3174;Parent=gene3253;Dbxref=Genbank:WP_002209485.1;Name=WP_002209485.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209485.1;transl_table=11 NC_005810.1 RefSeq gene 3485298 3485915 . + . ID=gene3254;Name=YP_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16325;old_locus_tag=YP3127%2CYP_3127 NC_005810.1 Protein Homology CDS 3485298 3485915 . + 0 ID=cds3175;Parent=gene3254;Dbxref=Genbank:WP_002209484.1;Name=WP_002209484.1;gbkey=CDS;product=hemophore HasA;protein_id=WP_002209484.1;transl_table=11 NC_005810.1 RefSeq gene 3486081 3487883 . + . ID=gene3255;Name=YP_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16330;old_locus_tag=YP3128%2CYP_3128 NC_005810.1 Protein Homology CDS 3486081 3487883 . + 0 ID=cds3176;Parent=gene3255;Dbxref=Genbank:WP_016598714.1;Name=WP_016598714.1;gbkey=CDS;product=peptidase;protein_id=WP_016598714.1;transl_table=11 NC_005810.1 RefSeq gene 3487959 3489287 . + . ID=gene3256;Name=YP_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16335;old_locus_tag=YP3129%2CYP_3129 NC_005810.1 Protein Homology CDS 3487959 3489287 . + 0 ID=cds3177;Parent=gene3256;Dbxref=Genbank:WP_002209482.1;Name=WP_002209482.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002209482.1;transl_table=11 NC_005810.1 RefSeq gene 3489352 3490155 . + . ID=gene3257;Name=YP_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16340;old_locus_tag=YP3130%2CYP_3130 NC_005810.1 Protein Homology CDS 3489352 3490155 . + 0 ID=cds3178;Parent=gene3257;Dbxref=Genbank:WP_002209481.1;Name=WP_002209481.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002209481.1;transl_table=11 NC_005810.1 RefSeq gene 3490271 3491734 . - . ID=gene3258;Name=YP_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16345;old_locus_tag=YP3131%2CYP_3131 NC_005810.1 Protein Homology CDS 3490271 3491734 . - 0 ID=cds3179;Parent=gene3258;Dbxref=Genbank:WP_002231139.1;Name=WP_002231139.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002231139.1;transl_table=11 NC_005810.1 RefSeq gene 3491829 3492560 . - . ID=gene3259;Name=YP_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16350;old_locus_tag=YP3132%2CYP_3132 NC_005810.1 Protein Homology CDS 3491829 3492560 . - 0 ID=cds3180;Parent=gene3259;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11 NC_005810.1 RefSeq gene 3492707 3493624 . + . ID=gene3260;Name=YP_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16355;old_locus_tag=YP3133%2CYP_3133 NC_005810.1 Protein Homology CDS 3492707 3493624 . + 0 ID=cds3181;Parent=gene3260;Dbxref=Genbank:WP_002209478.1;Name=WP_002209478.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209478.1;transl_table=11 NC_005810.1 RefSeq gene 3493607 3495007 . - . ID=gene3261;Name=YP_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16360;old_locus_tag=YP3134%2CYP_3134 NC_005810.1 Protein Homology CDS 3493607 3495007 . - 0 ID=cds3182;Parent=gene3261;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NC_005810.1 RefSeq gene 3495225 3495860 . + . ID=gene3262;Name=YP_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16365;old_locus_tag=YP3135%2CYP_3135 NC_005810.1 Protein Homology CDS 3495225 3495860 . + 0 ID=cds3183;Parent=gene3262;Dbxref=Genbank:WP_002209476.1;Name=WP_002209476.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209476.1;transl_table=11 NC_005810.1 RefSeq gene 3495873 3496280 . + . ID=gene3263;Name=YP_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16370;old_locus_tag=YP3136%2CYP_3136 NC_005810.1 Protein Homology CDS 3495873 3496280 . + 0 ID=cds3184;Parent=gene3263;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11 NC_005810.1 RefSeq gene 3496414 3497517 . - . ID=gene3264;Name=YP_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16375;old_locus_tag=YP3137%2CYP_3137 NC_005810.1 Protein Homology CDS 3496414 3497517 . - 0 ID=cds3185;Parent=gene3264;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11 NC_005810.1 RefSeq gene 3497516 3497761 . + . ID=gene3265;Name=YP_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16380 NC_005810.1 Protein Homology CDS 3497516 3497761 . + 0 ID=cds3186;Parent=gene3265;Dbxref=Genbank:WP_002215343.1;Name=WP_002215343.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215343.1;transl_table=11 NC_005810.1 RefSeq gene 3497997 3499874 . + . ID=gene3266;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YP_RS16385;old_locus_tag=YP3138%2CYP_3138 NC_005810.1 Protein Homology CDS 3497997 3499874 . + 0 ID=cds3187;Parent=gene3266;Dbxref=Genbank:WP_002228170.1;Name=WP_002228170.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_002228170.1;transl_table=11 NC_005810.1 RefSeq gene 3499819 3500682 . + . ID=gene3267;Name=YP_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16390;old_locus_tag=YP3139%2CYP_3139 NC_005810.1 Protein Homology CDS 3499819 3500682 . + 0 ID=cds3188;Parent=gene3267;Dbxref=Genbank:WP_002228171.1;Name=WP_002228171.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_002228171.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3500704 3506480 . + . ID=id658;gbkey=repeat_region NC_005810.1 RefSeq gene 3500948 3501133 . - . ID=gene3268;Name=YP_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22285 NC_005810.1 Protein Homology CDS 3500948 3501133 . - 0 ID=cds3189;Parent=gene3268;Dbxref=Genbank:WP_002218887.1;Name=WP_002218887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218887.1;transl_table=11 NC_005810.1 RefSeq gene 3501174 3501289 . - . ID=gene3269;Name=YP_RS16395;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS16395 NC_005810.1 cmsearch rRNA 3501174 3501289 . - . ID=rna74;Parent=gene3269;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 3501174 3501289 . - . ID=id659;Parent=rna74;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq gene 3501381 3504314 . - . ID=gene3270;Name=YP_RS16400;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS16400;old_locus_tag=23S_rRNA_6%2CYP_r18 NC_005810.1 RefSeq rRNA 3501381 3504314 . - . ID=rna75;Parent=gene3270;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq exon 3501381 3504314 . - . ID=id660;Parent=rna75;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq gene 3504558 3504633 . - . ID=gene3271;Name=YP_RS16405;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16405;old_locus_tag=tRNA-Glu_3%2CYP_t60 NC_005810.1 tRNAscan-SE tRNA 3504558 3504633 . - . ID=rna76;Parent=gene3271;anticodon=(pos:complement(3504597..3504599));gbkey=tRNA;product=tRNA-Glu NC_005810.1 tRNAscan-SE exon 3504558 3504633 . - . ID=id661;Parent=rna76;anticodon=(pos:complement(3504597..3504599));gbkey=tRNA;product=tRNA-Glu NC_005810.1 RefSeq gene 3504767 3506286 . - . ID=gene3272;Name=YP_RS16410;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS16410;old_locus_tag=16S_rRNA_6%2CYP_r19 NC_005810.1 RefSeq rRNA 3504767 3506286 . - . ID=rna77;Parent=gene3272;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq exon 3504767 3506286 . - . ID=id662;Parent=rna77;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq gene 3506403 3506479 . + . ID=gene3273;Name=YP_RS16415;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16415;old_locus_tag=tRNA-Asp_3%2CYP_t61 NC_005810.1 tRNAscan-SE tRNA 3506403 3506479 . + . ID=rna78;Parent=gene3273;anticodon=(pos:3506437..3506439);gbkey=tRNA;product=tRNA-Asp NC_005810.1 tRNAscan-SE exon 3506403 3506479 . + . ID=id663;Parent=rna78;anticodon=(pos:3506437..3506439);gbkey=tRNA;product=tRNA-Asp NC_005810.1 RefSeq gene 3506488 3506563 . + . ID=gene3274;Name=YP_RS16420;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16420;old_locus_tag=tRNA-Trp_1%2CYP_t62 NC_005810.1 tRNAscan-SE tRNA 3506488 3506563 . + . ID=rna79;Parent=gene3274;anticodon=(pos:3506521..3506523);gbkey=tRNA;product=tRNA-Trp NC_005810.1 tRNAscan-SE exon 3506488 3506563 . + . ID=id664;Parent=rna79;anticodon=(pos:3506521..3506523);gbkey=tRNA;product=tRNA-Trp NC_005810.1 RefSeq gene 3506696 3506905 . - . ID=gene3275;Name=YP_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16425 NC_005810.1 Protein Homology CDS 3506696 3506905 . - 0 ID=cds3190;Parent=gene3275;Dbxref=Genbank:WP_016257685.1;Name=WP_016257685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257685.1;transl_table=11 NC_005810.1 RefSeq gene 3507546 3508502 . + . ID=gene3276;Name=YP_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16430;old_locus_tag=YP3140%2CYP_3140 NC_005810.1 Protein Homology CDS 3507546 3508502 . + 0 ID=cds3191;Parent=gene3276;Dbxref=Genbank:WP_002212024.1;Name=WP_002212024.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002212024.1;transl_table=11 NC_005810.1 RefSeq gene 3508588 3510078 . + . ID=gene3277;Name=YP_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16435;old_locus_tag=YP3141%2CYP_3141 NC_005810.1 Protein Homology CDS 3508588 3510078 . + 0 ID=cds3192;Parent=gene3277;Dbxref=Genbank:WP_002212023.1;Name=WP_002212023.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002212023.1;transl_table=11 NC_005810.1 RefSeq gene 3510111 3511109 . + . ID=gene3278;Name=YP_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16440;old_locus_tag=YP3142%2CYP_3142 NC_005810.1 Protein Homology CDS 3510111 3511109 . + 0 ID=cds3193;Parent=gene3278;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11 NC_005810.1 RefSeq gene 3511109 3512101 . + . ID=gene3279;Name=YP_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16445;old_locus_tag=YP3143%2CYP_3143 NC_005810.1 Protein Homology CDS 3511109 3512101 . + 0 ID=cds3194;Parent=gene3279;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11 NC_005810.1 RefSeq gene 3512088 3512969 . - . ID=gene3280;Name=YP_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16450;old_locus_tag=YP3144%2CYP_3144 NC_005810.1 Protein Homology CDS 3512088 3512969 . - 0 ID=cds3195;Parent=gene3280;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11 NC_005810.1 RefSeq gene 3513088 3513426 . + . ID=gene3281;Name=YP_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16455;old_locus_tag=YP3145 NC_005810.1 Protein Homology CDS 3513088 3513426 . + 0 ID=cds3196;Parent=gene3281;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11 NC_005810.1 RefSeq gene 3513683 3515206 . - . ID=gene3282;Name=YP_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16460;old_locus_tag=YP3146%2CYP_3146 NC_005810.1 Protein Homology CDS 3513683 3515206 . - 0 ID=cds3197;Parent=gene3282;Dbxref=Genbank:WP_002212018.1;Name=WP_002212018.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATPase;protein_id=WP_002212018.1;transl_table=11 NC_005810.1 RefSeq gene 3515829 3517475 . + . ID=gene3283;Name=YP_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16465;old_locus_tag=YP3147%2CYP_3147 NC_005810.1 Protein Homology CDS 3515829 3517475 . + 0 ID=cds3198;Parent=gene3283;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11 NC_005810.1 RefSeq gene 3517472 3517729 . + . ID=gene3284;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YP_RS16470;old_locus_tag=YP3148%2CYP_3148 NC_005810.1 Protein Homology CDS 3517472 3517729 . + 0 ID=cds3199;Parent=gene3284;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11 NC_005810.1 RefSeq gene 3517752 3518678 . + . ID=gene3285;Name=YP_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16475;old_locus_tag=YP3149%2CYP_3149 NC_005810.1 Protein Homology CDS 3517752 3518678 . + 0 ID=cds3200;Parent=gene3285;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11 NC_005810.1 RefSeq gene 3518989 3520839 . + . ID=gene3286;Name=YP_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16480;old_locus_tag=YP3150%2CYP_3150 NC_005810.1 Protein Homology CDS 3518989 3520839 . + 0 ID=cds3201;Parent=gene3286;Dbxref=Genbank:WP_002212014.1;Name=WP_002212014.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11 NC_005810.1 RefSeq gene 3520845 3522389 . + . ID=gene3287;Name=YP_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16485;old_locus_tag=YP3151%2CYP_3151 NC_005810.1 Protein Homology CDS 3520845 3522389 . + 0 ID=cds3202;Parent=gene3287;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11 NC_005810.1 RefSeq gene 3522520 3522984 . - . ID=gene3288;Name=YP_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16490;old_locus_tag=YP3152%2CYP_3152 NC_005810.1 Protein Homology CDS 3522520 3522984 . - 0 ID=cds3203;Parent=gene3288;Dbxref=Genbank:WP_002216998.1;Name=WP_002216998.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216998.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3522905 3524114 . + . ID=id665;gbkey=repeat_region NC_005810.1 RefSeq gene 3523064 3523525 . - . ID=gene3289;Name=YP_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16495;old_locus_tag=YP3153%2CYP_3153 NC_005810.1 Protein Homology CDS 3523064 3523525 . - 0 ID=cds3204;Parent=gene3289;Dbxref=Genbank:WP_002217000.1;Name=WP_002217000.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217000.1;transl_table=11 NC_005810.1 RefSeq gene 3523605 3524066 . - . ID=gene3290;Name=YP_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16500;old_locus_tag=YP3154%2CYP_3154 NC_005810.1 Protein Homology CDS 3523605 3524066 . - 0 ID=cds3205;Parent=gene3290;Dbxref=Genbank:WP_002230571.1;Name=WP_002230571.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230571.1;transl_table=11 NC_005810.1 RefSeq gene 3524050 3524928 . - . ID=gene3291;Name=YP_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16505;old_locus_tag=YP3155%2CYP_3155 NC_005810.1 Protein Homology CDS 3524050 3524928 . - 0 ID=cds3206;Parent=gene3291;Dbxref=Genbank:WP_002228241.1;Name=WP_002228241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228241.1;transl_table=11 NC_005810.1 RefSeq gene 3525576 3525785 . + . ID=gene3292;Name=YP_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16510;old_locus_tag=YP3156%2CYP_3156 NC_005810.1 Protein Homology CDS 3525576 3525785 . + 0 ID=cds3207;Parent=gene3292;Dbxref=Genbank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NC_005810.1 RefSeq gene 3525840 3526721 . - . ID=gene3293;Name=YP_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16515;old_locus_tag=YP3157%2CYP_3157 NC_005810.1 Protein Homology CDS 3525840 3526721 . - 0 ID=cds3208;Parent=gene3293;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11 NC_005810.1 RefSeq gene 3527007 3528485 . + . ID=gene3294;Name=YP_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16520;old_locus_tag=YP3158%2CYP_3158 NC_005810.1 Protein Homology CDS 3527007 3528485 . + 0 ID=cds3209;Parent=gene3294;Dbxref=Genbank:WP_002212007.1;Name=WP_002212007.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_002212007.1;transl_table=11 NC_005810.1 RefSeq gene 3528666 3528866 . + . ID=gene3295;Name=YP_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16525;old_locus_tag=YP3159%2CYP_3159 NC_005810.1 Protein Homology CDS 3528666 3528866 . + 0 ID=cds3210;Parent=gene3295;Dbxref=Genbank:WP_002212006.1;Name=WP_002212006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212006.1;transl_table=11 NC_005810.1 RefSeq gene 3529074 3530504 . + . ID=gene3296;Name=YP_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16530;old_locus_tag=YP3160 NC_005810.1 Protein Homology CDS 3529074 3530504 . + 0 ID=cds3211;Parent=gene3296;Dbxref=Genbank:WP_002212005.1;Name=WP_002212005.1;gbkey=CDS;product=colicin;protein_id=WP_002212005.1;transl_table=11 NC_005810.1 RefSeq gene 3530504 3530767 . + . ID=gene3297;Name=YP_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16535;old_locus_tag=YP3161%2CYP_3161 NC_005810.1 Protein Homology CDS 3530504 3530767 . + 0 ID=cds3212;Parent=gene3297;Dbxref=Genbank:WP_002212004.1;Name=WP_002212004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212004.1;transl_table=11 NC_005810.1 RefSeq gene 3531020 3531271 . + . ID=gene3298;Name=YP_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16540;old_locus_tag=YP3162 NC_005810.1 Protein Homology CDS 3531020 3531271 . + 0 ID=cds3213;Parent=gene3298;Dbxref=Genbank:WP_002215823.1;Name=WP_002215823.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_002215823.1;transl_table=11 NC_005810.1 RefSeq gene 3531273 3531530 . + . ID=gene3299;Name=YP_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16545;old_locus_tag=YP3163%2CYP_3163 NC_005810.1 Protein Homology CDS 3531273 3531530 . + 0 ID=cds3214;Parent=gene3299;Dbxref=Genbank:WP_002212003.1;Name=WP_002212003.1;gbkey=CDS;product=colicin transporter;protein_id=WP_002212003.1;transl_table=11 NC_005810.1 RefSeq gene 3531983 3532141 . - . ID=gene3300;Name=YP_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16550;old_locus_tag=YP3164%2CYP_3164 NC_005810.1 Protein Homology CDS 3531983 3532141 . - 0 ID=cds3215;Parent=gene3300;Dbxref=Genbank:WP_002212002.1;Name=WP_002212002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212002.1;transl_table=11 NC_005810.1 RefSeq gene 3532165 3532983 . - . ID=gene3301;Name=YP_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16555;old_locus_tag=YP3165%2CYP_3165 NC_005810.1 Protein Homology CDS 3532165 3532983 . - 0 ID=cds3216;Parent=gene3301;Dbxref=Genbank:WP_002215825.1;Name=WP_002215825.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002215825.1;transl_table=11 NC_005810.1 RefSeq gene 3532949 3534226 . - . ID=gene3302;Name=YP_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16560;old_locus_tag=YP3166%2CYP_3166 NC_005810.1 Protein Homology CDS 3532949 3534226 . - 0 ID=cds3217;Parent=gene3302;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11 NC_005810.1 RefSeq gene 3534332 3536959 . - . ID=gene3303;Name=YP_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16565;old_locus_tag=YP3167%2CYP_3167 NC_005810.1 Protein Homology CDS 3534332 3536959 . - 0 ID=cds3218;Parent=gene3303;Dbxref=Genbank:WP_002211999.1;Name=WP_002211999.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211999.1;transl_table=11 NC_005810.1 RefSeq gene 3536987 3537718 . - . ID=gene3304;Name=YP_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16570;old_locus_tag=YP3168%2CYP_3168 NC_005810.1 Protein Homology CDS 3536987 3537718 . - 0 ID=cds3219;Parent=gene3304;Dbxref=Genbank:WP_002211998.1;Name=WP_002211998.1;gbkey=CDS;product=gram-negative pili assembly chaperone;protein_id=WP_002211998.1;transl_table=11 NC_005810.1 RefSeq gene 3537782 3538312 . - . ID=gene3305;Name=YP_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16575;old_locus_tag=YP3169%2CYP_3169 NC_005810.1 Protein Homology CDS 3537782 3538312 . - 0 ID=cds3220;Parent=gene3305;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NC_005810.1 RefSeq gene 3538623 3538799 . + . ID=gene3306;Name=YP_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16580;old_locus_tag=YP3170 NC_005810.1 Protein Homology CDS 3538623 3538799 . + 0 ID=cds3221;Parent=gene3306;Dbxref=Genbank:WP_002231894.1;Name=WP_002231894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231894.1;transl_table=11 NC_005810.1 RefSeq gene 3539104 3539895 . - . ID=gene3307;Name=YP_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16585;old_locus_tag=YP3171%2CYP_3171 NC_005810.1 Protein Homology CDS 3539104 3539895 . - 0 ID=cds3222;Parent=gene3307;Dbxref=Genbank:WP_002211996.1;Name=WP_002211996.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_002211996.1;transl_table=11 NC_005810.1 RefSeq gene 3540134 3540415 . - . ID=gene3308;Name=YP_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16590;old_locus_tag=YP3172%2CYP_3172 NC_005810.1 Protein Homology CDS 3540134 3540415 . - 0 ID=cds3223;Parent=gene3308;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11 NC_005810.1 RefSeq gene 3540435 3540620 . - . ID=gene3309;Name=YP_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16595 NC_005810.1 Protein Homology CDS 3540435 3540620 . - 0 ID=cds3224;Parent=gene3309;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NC_005810.1 RefSeq gene 3540619 3542640 . + . ID=gene3310;Name=YP_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16600;old_locus_tag=YP3173%2CYP_3173 NC_005810.1 Protein Homology CDS 3540619 3542640 . + 0 ID=cds3225;Parent=gene3310;Dbxref=Genbank:WP_002211993.1;Name=WP_002211993.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_002211993.1;transl_table=11 NC_005810.1 RefSeq gene 3542789 3544282 . - . ID=gene3311;Name=YP_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16605;old_locus_tag=YP3175%2CYP_3175 NC_005810.1 Protein Homology CDS 3542789 3544282 . - 0 ID=cds3226;Parent=gene3311;Dbxref=Genbank:WP_032466602.1;Name=WP_032466602.1;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_032466602.1;transl_table=11 NC_005810.1 RefSeq gene 3544289 3545557 . - . ID=gene3312;Name=YP_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16610;old_locus_tag=YP3176%2CYP_3176 NC_005810.1 Protein Homology CDS 3544289 3545557 . - 0 ID=cds3227;Parent=gene3312;Dbxref=Genbank:WP_011171936.1;Name=WP_011171936.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=RNA helicase;protein_id=WP_011171936.1;transl_table=11 NC_005810.1 RefSeq gene 3545676 3546002 . + . ID=gene3313;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YP_RS16615;old_locus_tag=YP3177%2CYP_3177 NC_005810.1 Protein Homology CDS 3545676 3546002 . + 0 ID=cds3228;Parent=gene3313;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11 NC_005810.1 RefSeq gene 3546482 3547741 . + . ID=gene3314;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YP_RS16620;old_locus_tag=YP3178%2CYP_3178 NC_005810.1 Protein Homology CDS 3546482 3547741 . + 0 ID=cds3229;Parent=gene3314;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NC_005810.1 RefSeq gene 3548291 3549373 . + . ID=gene3315;Name=YP_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16625;old_locus_tag=YP3179%2CYP_3179 NC_005810.1 Protein Homology CDS 3548291 3549373 . + 0 ID=cds3230;Parent=gene3315;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11 NC_005810.1 RefSeq gene 3549394 3550470 . + . ID=gene3316;Name=YP_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16630;old_locus_tag=YP3180%2CYP_3180 NC_005810.1 Protein Homology CDS 3549394 3550470 . + 0 ID=cds3231;Parent=gene3316;Dbxref=Genbank:WP_002230565.1;Name=WP_002230565.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002230565.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3550589 3550622 . + . ID=id666;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3550819 3551949 . + . ID=gene3317;Name=YP_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16635;old_locus_tag=YP3181%2CYP_3181 NC_005810.1 Protein Homology CDS 3550819 3551949 . + 0 ID=cds3232;Parent=gene3317;Dbxref=Genbank:WP_002211986.1;Name=WP_002211986.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_002211986.1;transl_table=11 NC_005810.1 RefSeq gene 3551946 3553208 . + . ID=gene3318;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YP_RS16640;old_locus_tag=YP3182%2CYP_3182 NC_005810.1 Protein Homology CDS 3551946 3553208 . + 0 ID=cds3233;Parent=gene3318;Dbxref=Genbank:WP_002211985.1;Name=WP_002211985.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NC_005810.1 RefSeq gene 3553205 3554272 . + . ID=gene3319;Name=YP_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16645;old_locus_tag=YP3183%2CYP_3183 NC_005810.1 Protein Homology CDS 3553205 3554272 . + 0 ID=cds3234;Parent=gene3319;Dbxref=Genbank:WP_002211984.1;Name=WP_002211984.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_002211984.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3554504 3554554 . + . ID=id667;Note=degenerate repeat region containing 3 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3554567 3555448 . + . ID=gene3320;Name=YP_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16650;old_locus_tag=YP3184%2CYP_3184 NC_005810.1 Protein Homology CDS 3554567 3555448 . + 0 ID=cds3235;Parent=gene3320;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11 NC_005810.1 RefSeq gene 3555426 3556163 . + . ID=gene3321;Name=YP_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16655;old_locus_tag=YP3185%2CYP_3185 NC_005810.1 Protein Homology CDS 3555426 3556163 . + 0 ID=cds3236;Parent=gene3321;Dbxref=Genbank:WP_002211982.1;Name=WP_002211982.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_002211982.1;transl_table=11 NC_005810.1 RefSeq gene 3556165 3557295 . + . ID=gene3322;Name=YP_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16660;old_locus_tag=YP3186%2CYP_3186 NC_005810.1 Protein Homology CDS 3556165 3557295 . + 0 ID=cds3237;Parent=gene3322;Dbxref=Genbank:WP_002211981.1;Name=WP_002211981.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_002211981.1;transl_table=11 NC_005810.1 RefSeq gene 3557297 3558553 . + . ID=gene3323;Name=YP_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16665;old_locus_tag=YP3187%2CYP_3187 NC_005810.1 Protein Homology CDS 3557297 3558553 . + 0 ID=cds3238;Parent=gene3323;Dbxref=Genbank:WP_002211980.1;Name=WP_002211980.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=translocase;protein_id=WP_002211980.1;transl_table=11 NC_005810.1 RefSeq gene 3558576 3559661 . + . ID=gene3324;Name=YP_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16670;old_locus_tag=YP3188%2CYP_3188 NC_005810.1 Protein Homology CDS 3558576 3559661 . + 0 ID=cds3239;Parent=gene3324;Dbxref=Genbank:WP_002211979.1;Name=WP_002211979.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_002211979.1;transl_table=11 NC_005810.1 RefSeq gene 3559658 3561022 . + . ID=gene3325;Name=YP_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16675;old_locus_tag=YP3189%2CYP_3189 NC_005810.1 Protein Homology CDS 3559658 3561022 . + 0 ID=cds3240;Parent=gene3325;Dbxref=Genbank:WP_002211978.1;Name=WP_002211978.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=polymerase;protein_id=WP_002211978.1;transl_table=11 NC_005810.1 RefSeq gene 3561031 3561771 . + . ID=gene3326;Name=YP_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16680;old_locus_tag=YP3190%2CYP_3190 NC_005810.1 Protein Homology CDS 3561031 3561771 . + 0 ID=cds3241;Parent=gene3326;Dbxref=Genbank:WP_011171938.1;Name=WP_011171938.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_011171938.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3562045 3562170 . + . ID=id668;gbkey=repeat_region NC_005810.1 RefSeq gene 3562295 3563686 . + . ID=gene3327;Name=YP_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16685;old_locus_tag=YP3191%2CYP_3191 NC_005810.1 Protein Homology CDS 3562295 3563686 . + 0 ID=cds3242;Parent=gene3327;Dbxref=Genbank:WP_002220976.1;Name=WP_002220976.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220976.1;transl_table=11 NC_005810.1 RefSeq gene 3563835 3563911 . + . ID=gene3328;Name=YP_RS16690;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16690;old_locus_tag=tRNA-Arg_5%2CYP_t63 NC_005810.1 tRNAscan-SE tRNA 3563835 3563911 . + . ID=rna80;Parent=gene3328;anticodon=(pos:3563869..3563871);gbkey=tRNA;product=tRNA-Arg NC_005810.1 tRNAscan-SE exon 3563835 3563911 . + . ID=id669;Parent=rna80;anticodon=(pos:3563869..3563871);gbkey=tRNA;product=tRNA-Arg NC_005810.1 RefSeq gene 3563995 3564070 . + . ID=gene3329;Name=YP_RS16695;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16695;old_locus_tag=tRNA-His_1%2CYP_t64 NC_005810.1 tRNAscan-SE tRNA 3563995 3564070 . + . ID=rna81;Parent=gene3329;anticodon=(pos:3564028..3564030);gbkey=tRNA;product=tRNA-His NC_005810.1 tRNAscan-SE exon 3563995 3564070 . + . ID=id670;Parent=rna81;anticodon=(pos:3564028..3564030);gbkey=tRNA;product=tRNA-His NC_005810.1 RefSeq gene 3564087 3564173 . + . ID=gene3330;Name=YP_RS16700;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16700;old_locus_tag=tRNA-Leu_5%2CYP_t65 NC_005810.1 tRNAscan-SE tRNA 3564087 3564173 . + . ID=rna82;Parent=gene3330;anticodon=(pos:3564121..3564123);gbkey=tRNA;product=tRNA-Leu NC_005810.1 tRNAscan-SE exon 3564087 3564173 . + . ID=id671;Parent=rna82;anticodon=(pos:3564121..3564123);gbkey=tRNA;product=tRNA-Leu NC_005810.1 RefSeq gene 3564249 3564325 . + . ID=gene3331;Name=YP_RS16705;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS16705;old_locus_tag=tRNA-Pro_2%2CYP_t66 NC_005810.1 tRNAscan-SE tRNA 3564249 3564325 . + . ID=rna83;Parent=gene3331;anticodon=(pos:3564283..3564285);gbkey=tRNA;product=tRNA-Pro NC_005810.1 tRNAscan-SE exon 3564249 3564325 . + . ID=id672;Parent=rna83;anticodon=(pos:3564283..3564285);gbkey=tRNA;product=tRNA-Pro NC_005810.1 RefSeq repeat_region 3565041 3565762 . + . ID=id673;gbkey=repeat_region NC_005810.1 RefSeq region 3565047 3565758 . + . ID=id674;gbkey=mobile_element NC_005810.1 RefSeq gene 3565192 3565650 . + . ID=gene3332;Name=YP_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16710;old_locus_tag=YP3193%2CYP_3193 NC_005810.1 Protein Homology CDS 3565192 3565650 . + 0 ID=cds3243;Parent=gene3332;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 3565843 3567063 . - . ID=gene3333;Name=YP_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16715;old_locus_tag=YP3194%2CYP_3194 NC_005810.1 Protein Homology CDS 3565843 3567063 . - 0 ID=cds3244;Parent=gene3333;Dbxref=Genbank:WP_002211462.1;Name=WP_002211462.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_002211462.1;transl_table=11 NC_005810.1 RefSeq gene 3567066 3568190 . - . ID=gene3334;Name=YP_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16720;old_locus_tag=YP3195%2CYP_3195 NC_005810.1 Protein Homology CDS 3567066 3568190 . - 0 ID=cds3245;Parent=gene3334;Dbxref=Genbank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211463.1;transl_table=11 NC_005810.1 RefSeq gene 3568221 3568970 . - . ID=gene3335;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YP_RS16725;old_locus_tag=YP3196%2CYP_3196 NC_005810.1 Protein Homology CDS 3568221 3568970 . - 0 ID=cds3246;Parent=gene3335;Dbxref=Genbank:WP_002211464.1;Name=WP_002211464.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211464.1;transl_table=11 NC_005810.1 RefSeq gene 3568967 3569908 . - . ID=gene3336;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YP_RS16730;old_locus_tag=YP3197%2CYP_3197 NC_005810.1 Protein Homology CDS 3568967 3569908 . - 0 ID=cds3247;Parent=gene3336;Dbxref=Genbank:WP_002211465.1;Name=WP_002211465.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_002211465.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 3570247 3570278 . + . ID=id675;Dbxref=CollecTF:EXPSITE_00022540;Note=Transcription factor binding site for NP_991574. Originally reported in Yersinia pestis biovar Microtus strain 201~Evidence of regulation for: YP_3199;gbkey=protein_bind NC_005810.1 RefSeq gene 3570402 3572954 . + . ID=gene3337;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=YP_RS16735;old_locus_tag=YP3199%2CYP_3199 NC_005810.1 Protein Homology CDS 3570402 3572954 . + 0 ID=cds3248;Parent=gene3337;Dbxref=Genbank:WP_002230563.1;Name=WP_002230563.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_002230563.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3572991 3573163 . + . ID=id676;gbkey=repeat_region NC_005810.1 RefSeq gene 3573198 3573518 . - . ID=gene3338;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YP_RS16740;old_locus_tag=YP3200%2CYP_3200 NC_005810.1 Protein Homology CDS 3573198 3573518 . - 0 ID=cds3249;Parent=gene3338;Dbxref=Genbank:WP_002211469.1;Name=WP_002211469.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_002211469.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3573617 3573652 . + . ID=id677;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3573670 3573858 . + . ID=gene3339;Name=YP_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16745;old_locus_tag=YP3201%2CYP_3201 NC_005810.1 Protein Homology CDS 3573670 3573858 . + 0 ID=cds3250;Parent=gene3339;Dbxref=Genbank:WP_002211470.1;Name=WP_002211470.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211470.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3573981 3574012 . + . ID=id678;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3574042 3574866 . + . ID=gene3340;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YP_RS16750;old_locus_tag=YP3202%2CYP_3202 NC_005810.1 Protein Homology CDS 3574042 3574866 . + 0 ID=cds3251;Parent=gene3340;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NC_005810.1 RefSeq gene 3574931 3575635 . + . ID=gene3341;Name=YP_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16755;old_locus_tag=YP3203%2CYP_3203 NC_005810.1 Protein Homology CDS 3574931 3575635 . + 0 ID=cds3252;Parent=gene3341;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11 NC_005810.1 RefSeq gene 3575632 3576543 . + . ID=gene3342;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YP_RS16760;old_locus_tag=YP3204%2CYP_3204 NC_005810.1 Protein Homology CDS 3575632 3576543 . + 0 ID=cds3253;Parent=gene3342;Dbxref=Genbank:WP_002211473.1;Name=WP_002211473.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NC_005810.1 RefSeq gene 3576543 3577259 . + . ID=gene3343;Name=YP_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16765;old_locus_tag=YP3205%2CYP_3205 NC_005810.1 Protein Homology CDS 3576543 3577259 . + 0 ID=cds3254;Parent=gene3343;Dbxref=Genbank:WP_002211474.1;Name=WP_002211474.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_002211474.1;transl_table=11 NC_005810.1 RefSeq gene 3577361 3579523 . + . ID=gene3344;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=YP_RS16770;old_locus_tag=YP3206%2CYP_3206 NC_005810.1 Protein Homology CDS 3577361 3579523 . + 0 ID=cds3255;Parent=gene3344;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11 NC_005810.1 RefSeq gene 3579637 3580323 . - . ID=gene3345;Name=YP_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16775;old_locus_tag=YP3207%2CYP_3207 NC_005810.1 Protein Homology CDS 3579637 3580323 . - 0 ID=cds3256;Parent=gene3345;Dbxref=Genbank:WP_002211476.1;Name=WP_002211476.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002211476.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3579902 3579943 . + . ID=id679;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3580751 3581968 . + . ID=gene3346;Name=YP_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16780;old_locus_tag=YP3209%2CYP_3209 NC_005810.1 Protein Homology CDS 3580751 3581968 . + 0 ID=cds3257;Parent=gene3346;Dbxref=Genbank:WP_002211477.1;Name=WP_002211477.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211477.1;transl_table=11 NC_005810.1 RefSeq gene 3581994 3582824 . + . ID=gene3347;Name=YP_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16785;old_locus_tag=YP3210%2CYP_3210 NC_005810.1 Protein Homology CDS 3581994 3582824 . + 0 ID=cds3258;Parent=gene3347;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11 NC_005810.1 RefSeq gene 3583473 3584423 . + . ID=gene3348;Name=YP_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16790;old_locus_tag=YP3211%2CYP_3211 NC_005810.1 Protein Homology CDS 3583473 3584423 . + 0 ID=cds3259;Parent=gene3348;Dbxref=Genbank:WP_002211480.1;Name=WP_002211480.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_002211480.1;transl_table=11 NC_005810.1 RefSeq gene 3584521 3585411 . - . ID=gene3349;Name=YP_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16795;old_locus_tag=YP3212%2CYP_3212 NC_005810.1 Protein Homology CDS 3584521 3585411 . - 0 ID=cds3260;Parent=gene3349;Dbxref=Genbank:WP_002211481.1;Name=WP_002211481.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_002211481.1;transl_table=11 NC_005810.1 RefSeq gene 3585498 3585968 . - . ID=gene3350;Name=YP_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16800;old_locus_tag=YP3213%2CYP_3213 NC_005810.1 Protein Homology CDS 3585498 3585968 . - 0 ID=cds3261;Parent=gene3350;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11 NC_005810.1 RefSeq gene 3586190 3587068 . + . ID=gene3351;Name=YP_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16805;old_locus_tag=YP3214%2CYP_3214 NC_005810.1 Protein Homology CDS 3586190 3587068 . + 0 ID=cds3262;Parent=gene3351;Dbxref=Genbank:WP_002211483.1;Name=WP_002211483.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NC_005810.1 RefSeq gene 3587146 3588978 . + . ID=gene3352;Name=YP_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16810;old_locus_tag=YP3215%2CYP_3215 NC_005810.1 Protein Homology CDS 3587146 3588978 . + 0 ID=cds3263;Parent=gene3352;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NC_005810.1 RefSeq gene 3589085 3589705 . + . ID=gene3353;Name=YP_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16815;old_locus_tag=YP3216%2CYP_3216 NC_005810.1 Protein Homology CDS 3589085 3589705 . + 0 ID=cds3264;Parent=gene3353;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11 NC_005810.1 RefSeq gene 3589756 3590376 . - . ID=gene3354;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YP_RS16820;old_locus_tag=YP3217%2CYP_3217 NC_005810.1 Protein Homology CDS 3589756 3590376 . - 0 ID=cds3265;Parent=gene3354;Dbxref=Genbank:WP_002211486.1;Name=WP_002211486.1;gbkey=CDS;gene=rhtB;product=threonine transporter RhtB;protein_id=WP_002211486.1;transl_table=11 NC_005810.1 RefSeq gene 3590572 3591585 . + . ID=gene3355;Name=YP_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16825;old_locus_tag=YP3218%2CYP_3218 NC_005810.1 Protein Homology CDS 3590572 3591585 . + 0 ID=cds3266;Parent=gene3355;Dbxref=Genbank:WP_002211487.1;Name=WP_002211487.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NC_005810.1 RefSeq gene 3591620 3592429 . + . ID=gene3356;Name=YP_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16830;old_locus_tag=YP3219%2CYP_3219 NC_005810.1 Protein Homology CDS 3591620 3592429 . + 0 ID=cds3267;Parent=gene3356;Dbxref=Genbank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211488.1;transl_table=11 NC_005810.1 RefSeq gene 3592706 3593905 . + . ID=gene3357;Name=YP_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16835;old_locus_tag=YP3220%2CYP_3220 NC_005810.1 Protein Homology CDS 3592706 3593905 . + 0 ID=cds3268;Parent=gene3357;Dbxref=Genbank:WP_002366764.1;Name=WP_002366764.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_002366764.1;transl_table=11 NC_005810.1 RefSeq gene 3593979 3595094 . - . ID=gene3358;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YP_RS16840;old_locus_tag=YP3221%2CYP_3221 NC_005810.1 Protein Homology CDS 3593979 3595094 . - 0 ID=cds3269;Parent=gene3358;Dbxref=Genbank:WP_002211490.1;Name=WP_002211490.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NC_005810.1 RefSeq gene 3595447 3595545 . + . ID=gene3359;Name=YP_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16845 NC_005810.1 Protein Homology CDS 3595447 3595545 . + 0 ID=cds3270;Parent=gene3359;Dbxref=Genbank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002216569.1;transl_table=11 NC_005810.1 RefSeq gene 3595719 3597374 . + . ID=gene3360;Name=YP_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16850;old_locus_tag=YP3222%2CYP_3222 NC_005810.1 Protein Homology CDS 3595719 3597374 . + 0 ID=cds3271;Parent=gene3360;Dbxref=Genbank:WP_002211491.1;Name=WP_002211491.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002211491.1;transl_table=11 NC_005810.1 RefSeq gene 3597364 3598638 . + . ID=gene3361;Name=YP_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16855;old_locus_tag=YP3223%2CYP_3223 NC_005810.1 Protein Homology CDS 3597364 3598638 . + 0 ID=cds3272;Parent=gene3361;Dbxref=Genbank:WP_002211492.1;Name=WP_002211492.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_002211492.1;transl_table=11 NC_005810.1 RefSeq gene 3598635 3599930 . + . ID=gene3362;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YP_RS16860;old_locus_tag=YP3224%2CYP_3224 NC_005810.1 Protein Homology CDS 3598635 3599930 . + 0 ID=cds3273;Parent=gene3362;Dbxref=Genbank:WP_002211493.1;Name=WP_002211493.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_002211493.1;transl_table=11 NC_005810.1 RefSeq gene 3600092 3600619 . - . ID=gene3363;Name=YP_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16865;old_locus_tag=YP3225%2CYP_3225 NC_005810.1 Protein Homology CDS 3600092 3600619 . - 0 ID=cds3274;Parent=gene3363;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11 NC_005810.1 RefSeq gene 3600749 3601417 . - . ID=gene3364;Name=YP_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16870;old_locus_tag=YP3226%2CYP_3226 NC_005810.1 Protein Homology CDS 3600749 3601417 . - 0 ID=cds3275;Parent=gene3364;Dbxref=Genbank:WP_002211495.1;Name=WP_002211495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211495.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3601643 3601688 . + . ID=id680;Note=degenerate repeat region containing 2 copies of a 23bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3601701 3601955 . + . ID=gene3365;Name=YP_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16875;old_locus_tag=YP_3227 NC_005810.1 Protein Homology CDS 3601701 3601955 . + 0 ID=cds3276;Parent=gene3365;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3602029 3602066 . + . ID=id681;Note=exact repeat region containing 2 copies of a 19 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3602055 3604421 . - . ID=gene3366;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=YP_RS16880;old_locus_tag=YP3228%2CYP_3228 NC_005810.1 Protein Homology CDS 3602055 3604421 . - 0 ID=cds3277;Parent=gene3366;Dbxref=Genbank:WP_002211497.1;Name=WP_002211497.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=cadmium-transporting ATPase;protein_id=WP_002211497.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3602808 3602843 . + . ID=id682;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region;gene=zntA NC_005810.1 RefSeq repeat_region 3604637 3604672 . + . ID=id683;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3604835 3605461 . - . ID=gene3367;Name=YP_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16885;old_locus_tag=YP3229%2CYP_3229 NC_005810.1 Protein Homology CDS 3604835 3605461 . - 0 ID=cds3278;Parent=gene3367;Dbxref=Genbank:WP_002211498.1;Name=WP_002211498.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211498.1;transl_table=11 NC_005810.1 RefSeq gene 3605751 3606071 . + . ID=gene3368;Name=YP_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16890;old_locus_tag=YP3230%2CYP_3230 NC_005810.1 Protein Homology CDS 3605751 3606071 . + 0 ID=cds3279;Parent=gene3368;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11 NC_005810.1 RefSeq gene 3606283 3606702 . + . ID=gene3369;Name=YP_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16895;old_locus_tag=YP3231%2CYP_3231 NC_005810.1 Protein Homology CDS 3606283 3606702 . + 0 ID=cds3280;Parent=gene3369;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11 NC_005810.1 RefSeq gene 3606889 3607161 . - . ID=gene3370;Name=YP_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16900;old_locus_tag=YP3232%2CYP_3232 NC_005810.1 Protein Homology CDS 3606889 3607161 . - 0 ID=cds3281;Parent=gene3370;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11 NC_005810.1 RefSeq gene 3607151 3607813 . - . ID=gene3371;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YP_RS16905;old_locus_tag=YP3233%2CYP_3233 NC_005810.1 Protein Homology CDS 3607151 3607813 . - 0 ID=cds3282;Parent=gene3371;Dbxref=Genbank:WP_002211502.1;Name=WP_002211502.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_002211502.1;transl_table=11 NC_005810.1 RefSeq gene 3607923 3608066 . - . ID=gene3372;Name=YP_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16910;old_locus_tag=YP3234%2CYP_3234 NC_005810.1 Protein Homology CDS 3607923 3608066 . - 0 ID=cds3283;Parent=gene3372;Dbxref=Genbank:WP_002215975.1;Name=WP_002215975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215975.1;transl_table=11 NC_005810.1 RefSeq gene 3608095 3609738 . + . ID=gene3373;Name=YP_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16915;old_locus_tag=YP3235%2CYP_3235 NC_005810.1 Protein Homology CDS 3608095 3609738 . + 0 ID=cds3284;Parent=gene3373;Dbxref=Genbank:WP_002404590.1;Name=WP_002404590.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_002404590.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3608419 3608448 . + . ID=id684;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3608701 3608772 . + . ID=id685;gbkey=repeat_region NC_005810.1 RefSeq gene 3609744 3610412 . + . ID=gene3374;Name=YP_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16920;old_locus_tag=YP3236%2CYP_3236 NC_005810.1 Protein Homology CDS 3609744 3610412 . + 0 ID=cds3285;Parent=gene3374;Dbxref=Genbank:WP_002211504.1;Name=WP_002211504.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_002211504.1;transl_table=11 NC_005810.1 RefSeq gene 3610402 3611355 . + . ID=gene3375;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YP_RS16925;old_locus_tag=YP3237%2CYP_3237 NC_005810.1 Protein Homology CDS 3610402 3611355 . + 0 ID=cds3286;Parent=gene3375;Dbxref=Genbank:WP_002211505.1;Name=WP_002211505.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NC_005810.1 RefSeq gene 3611666 3612523 . + . ID=gene3376;Name=YP_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16930;old_locus_tag=YP3238%2CYP_3238 NC_005810.1 Protein Homology CDS 3611666 3612523 . + 0 ID=cds3287;Parent=gene3376;Dbxref=Genbank:WP_002211506.1;Name=WP_002211506.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_002211506.1;transl_table=11 NC_005810.1 RefSeq gene 3612577 3612747 . + . ID=gene3377;Name=YP_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16935 NC_005810.1 Protein Homology CDS 3612577 3612747 . + 0 ID=cds3288;Parent=gene3377;Dbxref=Genbank:WP_029787950.1;Name=WP_029787950.1;gbkey=CDS;product=transposase;protein_id=WP_029787950.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3612593 3613307 . + . ID=id686;gbkey=repeat_region NC_005810.1 RefSeq region 3612593 3613303 . + . ID=id687;gbkey=mobile_element NC_005810.1 RefSeq gene 3612737 3613195 . + . ID=gene3378;Name=YP_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16940;old_locus_tag=YP3239%2CYP_3239 NC_005810.1 Protein Homology CDS 3612737 3613195 . + 0 ID=cds3289;Parent=gene3378;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 3613441 3613833 . - . ID=gene3379;Name=YP_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16945;old_locus_tag=YP3240%2CYP_3240 NC_005810.1 Protein Homology CDS 3613441 3613833 . - 0 ID=cds3290;Parent=gene3379;Dbxref=Genbank:WP_002211507.1;Name=WP_002211507.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002211507.1;transl_table=11 NC_005810.1 RefSeq gene 3614255 3615370 . + . ID=gene3380;Name=YP_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16950;old_locus_tag=YP3241%2CYP_3241 NC_005810.1 Protein Homology CDS 3614255 3615370 . + 0 ID=cds3291;Parent=gene3380;Dbxref=Genbank:WP_002211508.1;Name=WP_002211508.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002211508.1;transl_table=11 NC_005810.1 RefSeq gene 3615551 3616477 . + . ID=gene3381;Name=YP_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16955;old_locus_tag=YP3242%2CYP_3242 NC_005810.1 Protein Homology CDS 3615551 3616477 . + 0 ID=cds3292;Parent=gene3381;Dbxref=Genbank:WP_002211509.1;Name=WP_002211509.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_002211509.1;transl_table=11 NC_005810.1 RefSeq gene 3616474 3617760 . + . ID=gene3382;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YP_RS16960;old_locus_tag=YP3243%2CYP_3243 NC_005810.1 Protein Homology CDS 3616474 3617760 . + 0 ID=cds3293;Parent=gene3382;Dbxref=Genbank:WP_002211510.1;Name=WP_002211510.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_002211510.1;transl_table=11 NC_005810.1 RefSeq gene 3617757 3618524 . + . ID=gene3383;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YP_RS16965;old_locus_tag=YP3244%2CYP_3244 NC_005810.1 Protein Homology CDS 3617757 3618524 . + 0 ID=cds3294;Parent=gene3383;Dbxref=Genbank:WP_002230562.1;Name=WP_002230562.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002230562.1;transl_table=11 NC_005810.1 RefSeq gene 3618569 3619270 . + . ID=gene3384;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YP_RS16970;old_locus_tag=YP3245%2CYP_3245 NC_005810.1 Protein Homology CDS 3618569 3619270 . + 0 ID=cds3295;Parent=gene3384;Dbxref=Genbank:WP_002211512.1;Name=WP_002211512.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211512.1;transl_table=11 NC_005810.1 RefSeq gene 3619498 3619959 . + . ID=gene3385;Name=YP_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16975;old_locus_tag=YP3246%2CYP_3246 NC_005810.1 Protein Homology CDS 3619498 3619959 . + 0 ID=cds3296;Parent=gene3385;Dbxref=Genbank:WP_002211513.1;Name=WP_002211513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211513.1;transl_table=11 NC_005810.1 RefSeq gene 3620074 3621180 . - . ID=gene3386;Name=YP_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16980;old_locus_tag=YP3247%2CYP_3247 NC_005810.1 Protein Homology CDS 3620074 3621180 . - 0 ID=cds3297;Parent=gene3386;Dbxref=Genbank:WP_002211514.1;Name=WP_002211514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211514.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3621200 3621234 . + . ID=id688;Note=degenerate repeat region containing 5 copies of a 7bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3621223 3621741 . - . ID=gene3387;Name=YP_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16985;old_locus_tag=YP3248%2CYP_3248 NC_005810.1 Protein Homology CDS 3621223 3621741 . - 0 ID=cds3298;Parent=gene3387;Dbxref=Genbank:WP_002211515.1;Name=WP_002211515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211515.1;transl_table=11 NC_005810.1 RefSeq gene 3621803 3622450 . - . ID=gene3388;Name=YP_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16990;old_locus_tag=YP3249%2CYP_3249 NC_005810.1 Protein Homology CDS 3621803 3622450 . - 0 ID=cds3299;Parent=gene3388;Dbxref=Genbank:WP_002211516.1;Name=WP_002211516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211516.1;transl_table=11 NC_005810.1 RefSeq gene 3622422 3623108 . - . ID=gene3389;Name=YP_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS16995;old_locus_tag=YP3250%2CYP_3250 NC_005810.1 Protein Homology CDS 3622422 3623108 . - 0 ID=cds3300;Parent=gene3389;Dbxref=Genbank:WP_002211517.1;Name=WP_002211517.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211517.1;transl_table=11 NC_005810.1 RefSeq gene 3623126 3625459 . - . ID=gene3390;Name=YP_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17000;old_locus_tag=YP3251%2CYP_3251 NC_005810.1 Protein Homology CDS 3623126 3625459 . - 0 ID=cds3301;Parent=gene3390;Dbxref=Genbank:WP_002211518.1;Name=WP_002211518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211518.1;transl_table=11 NC_005810.1 RefSeq gene 3625726 3626217 . - . ID=gene3391;Name=YP_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17005;old_locus_tag=YP3252 NC_005810.1 Protein Homology CDS 3625726 3626217 . - 0 ID=cds3302;Parent=gene3391;Dbxref=Genbank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228181.1;transl_table=11 NC_005810.1 RefSeq gene 3626772 3628091 . + . ID=gene3392;Name=YP_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17010;old_locus_tag=YP3253%2CYP_3253 NC_005810.1 Protein Homology CDS 3626772 3628091 . + 0 ID=cds3303;Parent=gene3392;Dbxref=Genbank:WP_002211520.1;Name=WP_002211520.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_002211520.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3628259 3628294 . + . ID=id689;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3628389 3629276 . + . ID=gene3393;Name=YP_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17015;old_locus_tag=YP3254%2CYP_3254 NC_005810.1 Protein Homology CDS 3628389 3629276 . + 0 ID=cds3304;Parent=gene3393;Dbxref=Genbank:WP_002211521.1;Name=WP_002211521.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211521.1;transl_table=11 NC_005810.1 RefSeq gene 3629273 3630118 . + . ID=gene3394;Name=YP_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17020;old_locus_tag=YP3255%2CYP_3255 NC_005810.1 Protein Homology CDS 3629273 3630118 . + 0 ID=cds3305;Parent=gene3394;Dbxref=Genbank:WP_002211522.1;Name=WP_002211522.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211522.1;transl_table=11 NC_005810.1 RefSeq gene 3630125 3631198 . + . ID=gene3395;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YP_RS17025;old_locus_tag=YP3256%2CYP_3256 NC_005810.1 Protein Homology CDS 3630125 3631198 . + 0 ID=cds3306;Parent=gene3395;Dbxref=Genbank:WP_002211523.1;Name=WP_002211523.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_002211523.1;transl_table=11 NC_005810.1 RefSeq gene 3631195 3631944 . + . ID=gene3396;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YP_RS17030;old_locus_tag=YP3257%2CYP_3257 NC_005810.1 Protein Homology CDS 3631195 3631944 . + 0 ID=cds3307;Parent=gene3396;Dbxref=Genbank:WP_002211524.1;Name=WP_002211524.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211524.1;transl_table=11 NC_005810.1 RefSeq gene 3632045 3633001 . + . ID=gene3397;Name=YP_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17035;old_locus_tag=YP3258%2CYP_3258 NC_005810.1 Protein Homology CDS 3632045 3633001 . + 0 ID=cds3308;Parent=gene3397;Dbxref=Genbank:WP_002224020.1;Name=WP_002224020.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224020.1;transl_table=11 NC_005810.1 RefSeq gene 3633354 3634253 . + . ID=gene3398;Name=YP_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17040;old_locus_tag=YP3259%2CYP_3259 NC_005810.1 Protein Homology CDS 3633354 3634253 . + 0 ID=cds3309;Parent=gene3398;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11 NC_005810.1 RefSeq gene 3634141 3635094 . - . ID=gene3399;Name=YP_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17045;old_locus_tag=YP3260%2CYP_3260 NC_005810.1 Protein Homology CDS 3634141 3635094 . - 0 ID=cds3310;Parent=gene3399;Dbxref=Genbank:WP_002211525.1;Name=WP_002211525.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211525.1;transl_table=11 NC_005810.1 RefSeq gene 3635185 3637476 . + . ID=gene3400;Name=YP_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17050;old_locus_tag=YP3261%2CYP_3261 NC_005810.1 Protein Homology CDS 3635185 3637476 . + 0 ID=cds3311;Parent=gene3400;Dbxref=Genbank:WP_002220853.1;Name=WP_002220853.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_002220853.1;transl_table=11 NC_005810.1 RefSeq gene 3637531 3638403 . - . ID=gene3401;Name=YP_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17055;old_locus_tag=YP3262%2CYP_3262 NC_005810.1 Protein Homology CDS 3637531 3638403 . - 0 ID=cds3312;Parent=gene3401;Dbxref=Genbank:WP_002211527.1;Name=WP_002211527.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_002211527.1;transl_table=11 NC_005810.1 RefSeq gene 3638831 3639592 . + . ID=gene3402;Name=YP_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17060;old_locus_tag=YP3263%2CYP_3263 NC_005810.1 Protein Homology CDS 3638831 3639592 . + 0 ID=cds3313;Parent=gene3402;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NC_005810.1 RefSeq gene 3639713 3640543 . + . ID=gene3403;Name=YP_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17065;old_locus_tag=YP3264%2CYP_3264 NC_005810.1 Protein Homology CDS 3639713 3640543 . + 0 ID=cds3314;Parent=gene3403;Dbxref=Genbank:WP_002228183.1;Name=WP_002228183.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228183.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3640721 3640754 . + . ID=id690;Note=exact repeat region containing 2 copies of a 17 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3640907 3642718 . + . ID=gene3404;Name=YP_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17070;old_locus_tag=YP3265%2CYP_3265 NC_005810.1 Protein Homology CDS 3640907 3642718 . + 0 ID=cds3315;Parent=gene3404;Dbxref=Genbank:WP_002211530.1;Name=WP_002211530.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_002211530.1;transl_table=11 NC_005810.1 RefSeq gene 3642990 3643520 . + . ID=gene3405;Name=YP_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17075;old_locus_tag=YP3266%2CYP_3266 NC_005810.1 Protein Homology CDS 3642990 3643520 . + 0 ID=cds3316;Parent=gene3405;Dbxref=Genbank:WP_002211531.1;Name=WP_002211531.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002211531.1;transl_table=11 NC_005810.1 RefSeq gene 3643728 3645233 . + . ID=gene3406;Name=YP_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17080;old_locus_tag=YP3267%2CYP_3267 NC_005810.1 Protein Homology CDS 3643728 3645233 . + 0 ID=cds3317;Parent=gene3406;Dbxref=Genbank:WP_002211532.1;Name=WP_002211532.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_002211532.1;transl_table=11 NC_005810.1 RefSeq gene 3645325 3646080 . + . ID=gene3407;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YP_RS17085;old_locus_tag=YP3268%2CYP_3268 NC_005810.1 Protein Homology CDS 3645325 3646080 . + 0 ID=cds3318;Parent=gene3407;Dbxref=Genbank:WP_002224024.1;Name=WP_002224024.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002224024.1;transl_table=11 NC_005810.1 RefSeq gene 3646094 3646744 . + . ID=gene3408;Name=YP_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17090;old_locus_tag=YP3269%2CYP_3269 NC_005810.1 Protein Homology CDS 3646094 3646744 . + 0 ID=cds3319;Parent=gene3408;Dbxref=Genbank:WP_002215928.1;Name=WP_002215928.1;gbkey=CDS;product=sterol-binding protein;protein_id=WP_002215928.1;transl_table=11 NC_005810.1 RefSeq gene 3646744 3648375 . + . ID=gene3409;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=YP_RS17095;old_locus_tag=YP3270%2CYP_3270 NC_005810.1 Protein Homology CDS 3646744 3648375 . + 0 ID=cds3320;Parent=gene3409;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11 NC_005810.1 RefSeq gene 3648555 3648821 . + . ID=gene3410;Name=YP_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17100;old_locus_tag=YP3271%2CYP_3271 NC_005810.1 Protein Homology CDS 3648555 3648821 . + 0 ID=cds3321;Parent=gene3410;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11 NC_005810.1 RefSeq gene 3648825 3649487 . + . ID=gene3411;Name=YP_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17105;old_locus_tag=YP3272%2CYP_3272 NC_005810.1 Protein Homology CDS 3648825 3649487 . + 0 ID=cds3322;Parent=gene3411;Dbxref=Genbank:WP_002211537.1;Name=WP_002211537.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_002211537.1;transl_table=11 NC_005810.1 RefSeq gene 3649490 3650266 . + . ID=gene3412;Name=YP_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17110;old_locus_tag=YP3273%2CYP_3273 NC_005810.1 Protein Homology CDS 3649490 3650266 . + 0 ID=cds3323;Parent=gene3412;Dbxref=Genbank:WP_002211538.1;Name=WP_002211538.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_002211538.1;transl_table=11 NC_005810.1 RefSeq gene 3650322 3650861 . + . ID=gene3413;Name=YP_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17115 NC_005810.1 Protein Homology CDS 3650322 3650861 . + 0 ID=cds3324;Parent=gene3413;Dbxref=Genbank:WP_002211539.1;Name=WP_002211539.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211539.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3650799 3652757 . + . ID=id691;gbkey=repeat_region NC_005810.1 RefSeq region 3650802 3652754 . + . ID=id692;gbkey=mobile_element NC_005810.1 RefSeq gene 3650888 3651910 . + . ID=gene3414;Name=YP_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17120;old_locus_tag=YP3275%2CYP_3275 NC_005810.1 Protein Homology CDS 3650888 3651910 . + 0 ID=cds3325;Parent=gene3414;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 3651910 3652689 . + . ID=gene3415;Name=YP_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17125;old_locus_tag=YP3276%2CYP_3276 NC_005810.1 Protein Homology CDS 3651910 3652689 . + 0 ID=cds3326;Parent=gene3415;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 3652728 3653063 . + . ID=gene3416;Name=YP_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17130 NC_005810.1 Protein Homology CDS 3652728 3653063 . + 0 ID=cds3327;Parent=gene3416;Dbxref=Genbank:WP_002211540.1;Name=WP_002211540.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211540.1;transl_table=11 NC_005810.1 RefSeq gene 3653078 3654100 . + . ID=gene3417;Name=YP_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17135;old_locus_tag=YP3277%2CYP_3277 NC_005810.1 Protein Homology CDS 3653078 3654100 . + 0 ID=cds3328;Parent=gene3417;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11 NC_005810.1 RefSeq gene 3654210 3654698 . - . ID=gene3418;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YP_RS17140;old_locus_tag=YP3278%2CYP_3278 NC_005810.1 Protein Homology CDS 3654210 3654698 . - 0 ID=cds3329;Parent=gene3418;Dbxref=Genbank:WP_002211542.1;Name=WP_002211542.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_002211542.1;transl_table=11 NC_005810.1 RefSeq gene 3654946 3656442 . + . ID=gene3419;Name=YP_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17145;old_locus_tag=YP3279%2CYP_3279 NC_005810.1 Protein Homology CDS 3654946 3656442 . + 0 ID=cds3330;Parent=gene3419;Dbxref=Genbank:WP_002215917.1;Name=WP_002215917.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002215917.1;transl_table=11 NC_005810.1 RefSeq gene 3656497 3657198 . + . ID=gene3420;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=YP_RS17150;old_locus_tag=YP3280%2CYP_3280 NC_005810.1 Protein Homology CDS 3656497 3657198 . + 0 ID=cds3331;Parent=gene3420;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3657316 3657349 . + . ID=id693;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3657358 3658521 . - . ID=gene3421;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YP_RS17155;old_locus_tag=YP3281%2CYP_3281 NC_005810.1 Protein Homology CDS 3657358 3658521 . - 0 ID=cds3332;Parent=gene3421;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11 NC_005810.1 RefSeq gene 3658533 3660722 . - . ID=gene3422;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YP_RS17160;old_locus_tag=YP3282%2CYP_3282 NC_005810.1 Protein Homology CDS 3658533 3660722 . - 0 ID=cds3333;Parent=gene3422;Dbxref=Genbank:WP_002211546.1;Name=WP_002211546.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002211546.1;transl_table=11 NC_005810.1 RefSeq gene 3661049 3662380 . + . ID=gene3423;Name=YP_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17165;old_locus_tag=YP3283%2CYP_3283 NC_005810.1 Protein Homology CDS 3661049 3662380 . + 0 ID=cds3334;Parent=gene3423;Dbxref=Genbank:WP_002211547.1;Name=WP_002211547.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_002211547.1;transl_table=11 NC_005810.1 RefSeq gene 3662380 3662991 . + . ID=gene3424;Name=YP_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17170;old_locus_tag=YP3284%2CYP_3284 NC_005810.1 Protein Homology CDS 3662380 3662991 . + 0 ID=cds3335;Parent=gene3424;Dbxref=Genbank:WP_002231137.1;Name=WP_002231137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231137.1;transl_table=11 NC_005810.1 RefSeq gene 3663031 3664482 . + . ID=gene3425;Name=YP_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17175;old_locus_tag=YP3285%2CYP_3285 NC_005810.1 Protein Homology CDS 3663031 3664482 . + 0 ID=cds3336;Parent=gene3425;Dbxref=Genbank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;product=potassium transporter;protein_id=WP_002211550.1;transl_table=11 NC_005810.1 RefSeq gene 3664504 3665037 . + . ID=gene3426;Name=YP_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17180;old_locus_tag=YP3286%2CYP_3286 NC_005810.1 Protein Homology CDS 3664504 3665037 . + 0 ID=cds3337;Parent=gene3426;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3665063 3670718 . + . ID=id694;gbkey=repeat_region NC_005810.1 RefSeq gene 3665321 3665506 . - . ID=gene3427;Name=YP_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22290;old_locus_tag=YP3287%2CYP_3287 NC_005810.1 Protein Homology CDS 3665321 3665506 . - 0 ID=cds3338;Parent=gene3427;Dbxref=Genbank:WP_002218887.1;Name=WP_002218887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218887.1;transl_table=11 NC_005810.1 RefSeq gene 3665547 3665662 . - . ID=gene3428;Name=YP_RS17185;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS17185 NC_005810.1 cmsearch rRNA 3665547 3665662 . - . ID=rna84;Parent=gene3428;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 cmsearch exon 3665547 3665662 . - . ID=id695;Parent=rna84;gbkey=rRNA;product=5S ribosomal RNA NC_005810.1 RefSeq gene 3665754 3668687 . - . ID=gene3429;Name=YP_RS17190;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS17190;old_locus_tag=23S_rRNA_7%2CYP_r21 NC_005810.1 RefSeq rRNA 3665754 3668687 . - . ID=rna85;Parent=gene3429;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq exon 3665754 3668687 . - . ID=id696;Parent=rna85;gbkey=rRNA;product=23S ribosomal RNA NC_005810.1 RefSeq gene 3668897 3668972 . - . ID=gene3430;Name=YP_RS17195;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS17195;old_locus_tag=tRNA-Ala_5%2CYP_t67 NC_005810.1 tRNAscan-SE tRNA 3668897 3668972 . - . ID=rna86;Parent=gene3430;anticodon=(pos:complement(3668937..3668939));gbkey=tRNA;product=tRNA-Ala NC_005810.1 tRNAscan-SE exon 3668897 3668972 . - . ID=id697;Parent=rna86;anticodon=(pos:complement(3668937..3668939));gbkey=tRNA;product=tRNA-Ala NC_005810.1 RefSeq gene 3669024 3669100 . - . ID=gene3431;Name=YP_RS17200;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS17200;old_locus_tag=tRNA-Ile_4%2CYP_t68 NC_005810.1 tRNAscan-SE tRNA 3669024 3669100 . - . ID=rna87;Parent=gene3431;anticodon=(pos:complement(3669064..3669066));gbkey=tRNA;product=tRNA-Ile NC_005810.1 tRNAscan-SE exon 3669024 3669100 . - . ID=id698;Parent=rna87;anticodon=(pos:complement(3669064..3669066));gbkey=tRNA;product=tRNA-Ile NC_005810.1 RefSeq gene 3669200 3670727 . - . ID=gene3432;Name=YP_RS17205;gbkey=Gene;gene_biotype=rRNA;locus_tag=YP_RS17205;old_locus_tag=16S_rRNA_7%2CYP_r22 NC_005810.1 RefSeq rRNA 3669200 3670727 . - . ID=rna88;Parent=gene3432;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq exon 3669200 3670727 . - . ID=id699;Parent=rna88;gbkey=rRNA;product=16S ribosomal RNA NC_005810.1 RefSeq gene 3671174 3672211 . + . ID=gene3433;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YP_RS17210;old_locus_tag=YP3288%2CYP_3288 NC_005810.1 Protein Homology CDS 3671174 3672211 . + 0 ID=cds3339;Parent=gene3433;Dbxref=Genbank:WP_002212288.1;Name=WP_002212288.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_002212288.1;transl_table=11 NC_005810.1 RefSeq gene 3672208 3673167 . + . ID=gene3434;Name=YP_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17215;old_locus_tag=YP3289%2CYP_3289 NC_005810.1 Protein Homology CDS 3672208 3673167 . + 0 ID=cds3340;Parent=gene3434;Dbxref=Genbank:WP_002212289.1;Name=WP_002212289.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_002212289.1;transl_table=11 NC_005810.1 RefSeq gene 3673202 3674152 . - . ID=gene3435;Name=YP_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17220;old_locus_tag=YP3290%2CYP_3290 NC_005810.1 Protein Homology CDS 3673202 3674152 . - 0 ID=cds3341;Parent=gene3435;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NC_005810.1 RefSeq gene 3674363 3674914 . - . ID=gene3436;Name=YP_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17225;old_locus_tag=YP3291%2CYP_3291 NC_005810.1 Protein Homology CDS 3674363 3674914 . - 0 ID=cds3342;Parent=gene3436;Dbxref=Genbank:WP_002217850.1;Name=WP_002217850.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002217850.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3674915 3677604 . + . ID=id700;gbkey=repeat_region NC_005810.1 RefSeq region 3674918 3676870 . + . ID=id701;gbkey=mobile_element NC_005810.1 RefSeq gene 3675004 3676026 . + . ID=gene3437;Name=YP_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17230;old_locus_tag=YP3293%2CYP_3293 NC_005810.1 Protein Homology CDS 3675004 3676026 . + 0 ID=cds3343;Parent=gene3437;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 3676026 3676805 . + . ID=gene3438;Name=YP_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17235;old_locus_tag=YP3294%2CYP_3294 NC_005810.1 Protein Homology CDS 3676026 3676805 . + 0 ID=cds3344;Parent=gene3438;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 3676821 3677357 . + . ID=gene3439;Name=YP_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17240;old_locus_tag=YP3295 NC_005810.1 Protein Homology CDS 3676821 3677357 . + 0 ID=cds3345;Parent=gene3439;Dbxref=Genbank:WP_002230425.1;Name=WP_002230425.1;gbkey=CDS;product=integrase;protein_id=WP_002230425.1;transl_table=11 NC_005810.1 RefSeq region 3676872 3677388 . + . ID=id702;Note=partial element disrupted by IS100;gbkey=mobile_element NC_005810.1 RefSeq gene 3677712 3677981 . - . ID=gene3440;Name=YP_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17245 NC_005810.1 Protein Homology CDS 3677712 3677981 . - 0 ID=cds3346;Parent=gene3440;Dbxref=Genbank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11 NC_005810.1 RefSeq gene 3678146 3678610 . - . ID=gene3441;Name=YP_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17250;old_locus_tag=YP3297%2CYP_3297 NC_005810.1 Protein Homology CDS 3678146 3678610 . - 0 ID=cds3347;Parent=gene3441;Dbxref=Genbank:WP_002209495.1;Name=WP_002209495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209495.1;transl_table=11 NC_005810.1 RefSeq gene 3678919 3679293 . - . ID=gene3442;Name=YP_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17255;old_locus_tag=YP3298%2CYP_3298 NC_005810.1 Protein Homology CDS 3678919 3679293 . - 0 ID=cds3348;Parent=gene3442;Dbxref=Genbank:WP_002217865.1;Name=WP_002217865.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217865.1;transl_table=11 NC_005810.1 RefSeq gene 3679692 3681206 . + . ID=gene3443;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=YP_RS17260;old_locus_tag=YP3299%2CYP_3299 NC_005810.1 Protein Homology CDS 3679692 3681206 . + 0 ID=cds3349;Parent=gene3443;Dbxref=Genbank:WP_002220236.1;Name=WP_002220236.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002220236.1;transl_table=11 NC_005810.1 RefSeq gene 3681369 3683816 . - . ID=gene3444;Name=YP_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17265;old_locus_tag=YP3300%2CYP_3300 NC_005810.1 Protein Homology CDS 3681369 3683816 . - 0 ID=cds3350;Parent=gene3444;Dbxref=Genbank:WP_002209497.1;Name=WP_002209497.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_002209497.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3683853 3683884 . + . ID=id703;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3683985 3685415 . - . ID=gene3445;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YP_RS17270;old_locus_tag=YP3301%2CYP_3301 NC_005810.1 Protein Homology CDS 3683985 3685415 . - 0 ID=cds3351;Parent=gene3445;Dbxref=Genbank:WP_002209498.1;Name=WP_002209498.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_002209498.1;transl_table=11 NC_005810.1 RefSeq gene 3685483 3686913 . - . ID=gene3446;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YP_RS17275;old_locus_tag=YP3302%2CYP_3302 NC_005810.1 Protein Homology CDS 3685483 3686913 . - 0 ID=cds3352;Parent=gene3446;Dbxref=Genbank:WP_002214589.1;Name=WP_002214589.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_002214589.1;transl_table=11 NC_005810.1 RefSeq gene 3686923 3688911 . - . ID=gene3447;Name=YP_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17280;old_locus_tag=YP3303%2CYP_3303 NC_005810.1 Protein Homology CDS 3686923 3688911 . - 0 ID=cds3353;Parent=gene3447;Dbxref=Genbank:WP_002209499.1;Name=WP_002209499.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_002209499.1;transl_table=11 NC_005810.1 RefSeq gene 3688913 3691096 . - . ID=gene3448;Name=YP_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17285;old_locus_tag=YP3304%2CYP_3304 NC_005810.1 Protein Homology CDS 3688913 3691096 . - 0 ID=cds3354;Parent=gene3448;Dbxref=Genbank:WP_002209500.1;Name=WP_002209500.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=WP_002209500.1;transl_table=11 NC_005810.1 RefSeq gene 3691602 3693299 . + . ID=gene3449;Name=YP_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17290;old_locus_tag=YP3305%2CYP_3305 NC_005810.1 Protein Homology CDS 3691602 3693299 . + 0 ID=cds3355;Parent=gene3449;Dbxref=Genbank:WP_002209502.1;Name=WP_002209502.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002209502.1;transl_table=11 NC_005810.1 RefSeq gene 3693507 3702593 . - . ID=gene3450;Name=YP_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17295;old_locus_tag=YP3306%2CYP_3306 NC_005810.1 Protein Homology CDS 3693507 3702593 . - 0 ID=cds3356;Parent=gene3450;Dbxref=Genbank:WP_041175922.1;Name=WP_041175922.1;gbkey=CDS;product=invasin;protein_id=WP_041175922.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3697985 3700021 . - . ID=id704;Note=degenerate repeat region containing 7 copies of a 291bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3704137 3704478 . + . ID=gene3451;Name=YP_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17300;old_locus_tag=YP3307%2CYP_3307 NC_005810.1 Protein Homology CDS 3704137 3704478 . + 0 ID=cds3357;Parent=gene3451;Dbxref=Genbank:WP_011171941.1;Name=WP_011171941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171941.1;transl_table=11 NC_005810.1 RefSeq gene 3704569 3704856 . - . ID=gene3452;Name=YP_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17305;old_locus_tag=YP3308%2CYP_3308 NC_005810.1 Protein Homology CDS 3704569 3704856 . - 0 ID=cds3358;Parent=gene3452;Dbxref=Genbank:WP_002209504.1;Name=WP_002209504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209504.1;transl_table=11 NC_005810.1 RefSeq gene 3704863 3705162 . - . ID=gene3453;Name=YP_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17310;old_locus_tag=YP3309%2CYP_3309 NC_005810.1 Protein Homology CDS 3704863 3705162 . - 0 ID=cds3359;Parent=gene3453;Dbxref=Genbank:WP_002209505.1;Name=WP_002209505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209505.1;transl_table=11 NC_005810.1 RefSeq gene 3705478 3705759 . - . ID=gene3454;Name=YP_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17315;old_locus_tag=YP3310%2CYP_3310 NC_005810.1 Protein Homology CDS 3705478 3705759 . - 0 ID=cds3360;Parent=gene3454;Dbxref=Genbank:WP_002214584.1;Name=WP_002214584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214584.1;transl_table=11 NC_005810.1 RefSeq gene 3705928 3707031 . - . ID=gene3455;Name=YP_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17320;old_locus_tag=YP3311%2CYP_3311 NC_005810.1 Protein Homology CDS 3705928 3707031 . - 0 ID=cds3361;Parent=gene3455;Dbxref=Genbank:WP_002209507.1;Name=WP_002209507.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NC_005810.1 RefSeq gene 3707389 3707982 . + . ID=gene3456;Name=YP_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17325;old_locus_tag=YP3312%2CYP_3312 NC_005810.1 Protein Homology CDS 3707389 3707982 . + 0 ID=cds3362;Parent=gene3456;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3708073 3708175 . + . ID=id705;gbkey=repeat_region NC_005810.1 RefSeq gene 3708222 3708611 . - . ID=gene3457;Name=YP_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17330;old_locus_tag=YP3313%2CYP_3313 NC_005810.1 Protein Homology CDS 3708222 3708611 . - 0 ID=cds3363;Parent=gene3457;Dbxref=Genbank:WP_002209509.1;Name=WP_002209509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209509.1;transl_table=11 NC_005810.1 RefSeq gene 3708666 3708806 . - . ID=gene3458;Name=YP_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17335 NC_005810.1 Protein Homology CDS 3708666 3708806 . - 0 ID=cds3364;Parent=gene3458;Dbxref=Genbank:WP_002209510.1;Name=WP_002209510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209510.1;transl_table=11 NC_005810.1 RefSeq gene 3708997 3709230 . - . ID=gene3459;Name=YP_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17340;old_locus_tag=YP3314%2CYP_3314 NC_005810.1 Protein Homology CDS 3708997 3709230 . - 0 ID=cds3365;Parent=gene3459;Dbxref=Genbank:WP_002209511.1;Name=WP_002209511.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002209511.1;transl_table=11 NC_005810.1 RefSeq gene 3709412 3709915 . - . ID=gene3460;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YP_RS17345;old_locus_tag=YP3315%2CYP_3315 NC_005810.1 Protein Homology CDS 3709412 3709915 . - 0 ID=cds3366;Parent=gene3460;Dbxref=Genbank:WP_002209512.1;Name=WP_002209512.1;gbkey=CDS;gene=idnK;product=gluconokinase;protein_id=WP_002209512.1;transl_table=11 NC_005810.1 RefSeq gene 3710132 3711448 . + . ID=gene3461;Name=YP_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17350;old_locus_tag=YP3316%2CYP_3316 NC_005810.1 Protein Homology CDS 3710132 3711448 . + 0 ID=cds3367;Parent=gene3461;Dbxref=Genbank:WP_002209513.1;Name=WP_002209513.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002209513.1;transl_table=11 NC_005810.1 RefSeq gene 3711540 3712535 . - . ID=gene3462;Name=YP_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17355;old_locus_tag=YP3317%2CYP_3317 NC_005810.1 Protein Homology CDS 3711540 3712535 . - 0 ID=cds3368;Parent=gene3462;Dbxref=Genbank:WP_002209514.1;Name=WP_002209514.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209514.1;transl_table=11 NC_005810.1 RefSeq gene 3712664 3713359 . - . ID=gene3463;Name=YP_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17360;old_locus_tag=YP3318%2CYP_3318 NC_005810.1 Protein Homology CDS 3712664 3713359 . - 0 ID=cds3369;Parent=gene3463;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11 NC_005810.1 RefSeq gene 3713854 3714123 . + . ID=gene3464;Name=YP_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17365;old_locus_tag=YP3320%2CYP_3320 NC_005810.1 Protein Homology CDS 3713854 3714123 . + 0 ID=cds3370;Parent=gene3464;Dbxref=Genbank:WP_002215491.1;Name=WP_002215491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215491.1;transl_table=11 NC_005810.1 RefSeq gene 3714123 3714842 . + . ID=gene3465;Name=YP_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17370;old_locus_tag=YP3321%2CYP_3321 NC_005810.1 Protein Homology CDS 3714123 3714842 . + 0 ID=cds3371;Parent=gene3465;Dbxref=Genbank:WP_011171944.1;Name=WP_011171944.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_011171944.1;transl_table=11 NC_005810.1 RefSeq gene 3715027 3716034 . - . ID=gene3466;Name=YP_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17375;old_locus_tag=YP3322%2CYP_3322 NC_005810.1 Protein Homology CDS 3715027 3716034 . - 0 ID=cds3372;Parent=gene3466;Dbxref=Genbank:WP_002209518.1;Name=WP_002209518.1;gbkey=CDS;product=sugar kinase;protein_id=WP_002209518.1;transl_table=11 NC_005810.1 RefSeq gene 3716044 3716904 . - . ID=gene3467;Name=YP_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17380;old_locus_tag=YP3323%2CYP_3323 NC_005810.1 Protein Homology CDS 3716044 3716904 . - 0 ID=cds3373;Parent=gene3467;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11 NC_005810.1 RefSeq gene 3716930 3717613 . - . ID=gene3468;Name=YP_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17385;old_locus_tag=YP3324%2CYP_3324 NC_005810.1 Protein Homology CDS 3716930 3717613 . - 0 ID=cds3374;Parent=gene3468;Dbxref=Genbank:WP_002209520.1;Name=WP_002209520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209520.1;transl_table=11 NC_005810.1 RefSeq gene 3717688 3718632 . - . ID=gene3469;Name=YP_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17390;old_locus_tag=YP3325%2CYP_3325 NC_005810.1 Protein Homology CDS 3717688 3718632 . - 0 ID=cds3375;Parent=gene3469;Dbxref=Genbank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NC_005810.1 RefSeq gene 3718663 3719655 . - . ID=gene3470;Name=YP_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17395;old_locus_tag=YP3326%2CYP_3326 NC_005810.1 Protein Homology CDS 3718663 3719655 . - 0 ID=cds3376;Parent=gene3470;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11 NC_005810.1 RefSeq gene 3719648 3721171 . - . ID=gene3471;Name=YP_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17400;old_locus_tag=YP3327%2CYP_3327 NC_005810.1 Protein Homology CDS 3719648 3721171 . - 0 ID=cds3377;Parent=gene3471;Dbxref=Genbank:WP_002209523.1;Name=WP_002209523.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=WP_002209523.1;transl_table=11 NC_005810.1 RefSeq gene 3721360 3723915 . + . ID=gene3472;Name=YP_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17405;old_locus_tag=YP3328%2CYP_3328 NC_005810.1 Protein Homology CDS 3721360 3723915 . + 0 ID=cds3378;Parent=gene3472;Dbxref=Genbank:WP_011171945.1;Name=WP_011171945.1;gbkey=CDS;product=histidine kinase;protein_id=WP_011171945.1;transl_table=11 NC_005810.1 RefSeq gene 3724051 3725247 . - . ID=gene3473;Name=YP_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17410;old_locus_tag=YP3329%2CYP_3329 NC_005810.1 Protein Homology CDS 3724051 3725247 . - 0 ID=cds3379;Parent=gene3473;Dbxref=Genbank:WP_002215486.1;Name=WP_002215486.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215486.1;transl_table=11 NC_005810.1 RefSeq gene 3725558 3727054 . + . ID=gene3474;Name=YP_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17415;old_locus_tag=YP3330%2CYP_3330 NC_005810.1 Protein Homology CDS 3725558 3727054 . + 0 ID=cds3380;Parent=gene3474;Dbxref=Genbank:WP_002209526.1;Name=WP_002209526.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_002209526.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3727168 3727888 . + . ID=id706;gbkey=repeat_region NC_005810.1 RefSeq region 3727175 3727886 . + . ID=id707;gbkey=mobile_element NC_005810.1 RefSeq gene 3727320 3727778 . + . ID=gene3475;Name=YP_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17420;old_locus_tag=YP3331%2CYP_3331 NC_005810.1 Protein Homology CDS 3727320 3727778 . + 0 ID=cds3381;Parent=gene3475;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 3727911 3728246 . - . ID=gene3476;Name=YP_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17425;old_locus_tag=YP3332%2CYP_3332 NC_005810.1 Protein Homology CDS 3727911 3728246 . - 0 ID=cds3382;Parent=gene3476;Dbxref=Genbank:WP_002230412.1;Name=WP_002230412.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002230412.1;transl_table=11 NC_005810.1 RefSeq gene 3728954 3729400 . + . ID=gene3477;Name=YP_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17430;old_locus_tag=YP3333%2CYP_3333 NC_005810.1 Protein Homology CDS 3728954 3729400 . + 0 ID=cds3383;Parent=gene3477;Dbxref=Genbank:WP_002209528.1;Name=WP_002209528.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_002209528.1;transl_table=11 NC_005810.1 RefSeq gene 3729647 3730990 . + . ID=gene3478;Name=YP_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17435;old_locus_tag=YP3334%2CYP_3334 NC_005810.1 Protein Homology CDS 3729647 3730990 . + 0 ID=cds3384;Parent=gene3478;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NC_005810.1 RefSeq gene 3731238 3732572 . + . ID=gene3479;Name=YP_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17440;old_locus_tag=YP3335%2CYP_3335 NC_005810.1 Protein Homology CDS 3731238 3732572 . + 0 ID=cds3385;Parent=gene3479;Dbxref=Genbank:WP_002209530.1;Name=WP_002209530.1;gbkey=CDS;product=peptidase M10;protein_id=WP_002209530.1;transl_table=11 NC_005810.1 RefSeq gene 3732637 3733407 . - . ID=gene3480;Name=YP_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17445;old_locus_tag=YP3336%2CYP_3336 NC_005810.1 Protein Homology CDS 3732637 3733407 . - 0 ID=cds3386;Parent=gene3480;Dbxref=Genbank:WP_002215483.1;Name=WP_002215483.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_002215483.1;transl_table=11 NC_005810.1 RefSeq gene 3733411 3735453 . - . ID=gene3481;Name=YP_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17450;old_locus_tag=YP3337%2CYP_3337 NC_005810.1 Protein Homology CDS 3733411 3735453 . - 0 ID=cds3387;Parent=gene3481;Dbxref=Genbank:WP_002209531.1;Name=WP_002209531.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_002209531.1;transl_table=11 NC_005810.1 RefSeq gene 3735782 3736624 . + . ID=gene3482;Name=YP_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17455;old_locus_tag=YP3339%2CYP_3339 NC_005810.1 Protein Homology CDS 3735782 3736624 . + 0 ID=cds3388;Parent=gene3482;Dbxref=Genbank:WP_002209533.1;Name=WP_002209533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209533.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3736611 3736646 . + . ID=id708;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3736810 3738162 . + . ID=gene3483;Name=YP_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17460;old_locus_tag=YP3340%2CYP_3340 NC_005810.1 Protein Homology CDS 3736810 3738162 . + 0 ID=cds3389;Parent=gene3483;Dbxref=Genbank:WP_002209534.1;Name=WP_002209534.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_002209534.1;transl_table=11 NC_005810.1 RefSeq gene 3738354 3739481 . + . ID=gene3484;Name=YP_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17465;old_locus_tag=YP3341%2CYP_3341 NC_005810.1 Protein Homology CDS 3738354 3739481 . + 0 ID=cds3390;Parent=gene3484;Dbxref=Genbank:WP_002209535.1;Name=WP_002209535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209535.1;transl_table=11 NC_005810.1 RefSeq gene 3739659 3740927 . + . ID=gene3485;Name=YP_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17470;old_locus_tag=YP3342%2CYP_3342 NC_005810.1 Protein Homology CDS 3739659 3740927 . + 0 ID=cds3391;Parent=gene3485;Dbxref=Genbank:WP_002209536.1;Name=WP_002209536.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_002209536.1;transl_table=11 NC_005810.1 RefSeq gene 3740938 3742074 . + . ID=gene3486;Name=YP_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17475;old_locus_tag=YP3343%2CYP_3343 NC_005810.1 Protein Homology CDS 3740938 3742074 . + 0 ID=cds3392;Parent=gene3486;Dbxref=Genbank:WP_002209537.1;Name=WP_002209537.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_002209537.1;transl_table=11 NC_005810.1 RefSeq gene 3742320 3742826 . - . ID=gene3487;Name=YP_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17480;old_locus_tag=YP3344%2CYP_3344 NC_005810.1 Protein Homology CDS 3742320 3742826 . - 0 ID=cds3393;Parent=gene3487;Dbxref=Genbank:WP_002230405.1;Name=WP_002230405.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230405.1;transl_table=11 NC_005810.1 RefSeq gene 3742894 3743391 . - . ID=gene3488;Name=YP_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17485;old_locus_tag=YP3345%2CYP_3345 NC_005810.1 Protein Homology CDS 3742894 3743391 . - 0 ID=cds3394;Parent=gene3488;Dbxref=Genbank:WP_002209539.1;Name=WP_002209539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209539.1;transl_table=11 NC_005810.1 RefSeq gene 3743393 3744172 . - . ID=gene3489;Name=YP_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17490;old_locus_tag=YP3346%2CYP_3346 NC_005810.1 Protein Homology CDS 3743393 3744172 . - 0 ID=cds3395;Parent=gene3489;Dbxref=Genbank:WP_002209540.1;Name=WP_002209540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209540.1;transl_table=11 NC_005810.1 RefSeq gene 3744350 3747562 . - . ID=gene3490;Name=YP_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17495;old_locus_tag=YP3347%2CYP_3347 NC_005810.1 Protein Homology CDS 3744350 3747562 . - 0 ID=cds3396;Parent=gene3490;Dbxref=Genbank:WP_002214773.1;Name=WP_002214773.1;gbkey=CDS;product=autotransporter;protein_id=WP_002214773.1;transl_table=11 NC_005810.1 RefSeq gene 3748240 3749322 . + . ID=gene3491;Name=YP_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17500;old_locus_tag=YP3348%2CYP_3348 NC_005810.1 Protein Homology CDS 3748240 3749322 . + 0 ID=cds3397;Parent=gene3491;Dbxref=Genbank:WP_002209545.1;Name=WP_002209545.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209545.1;transl_table=11 NC_005810.1 RefSeq gene 3749326 3750123 . + . ID=gene3492;Name=YP_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17505;old_locus_tag=YP3349%2CYP_3349 NC_005810.1 Protein Homology CDS 3749326 3750123 . + 0 ID=cds3398;Parent=gene3492;Dbxref=Genbank:WP_002209546.1;Name=WP_002209546.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_002209546.1;transl_table=11 NC_005810.1 RefSeq gene 3750100 3752316 . - . ID=gene3493;Name=YP_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17510;old_locus_tag=YP3350%2CYP_3350 NC_005810.1 Protein Homology CDS 3750100 3752316 . - 0 ID=cds3399;Parent=gene3493;Dbxref=Genbank:WP_002228712.1;Name=WP_002228712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228712.1;transl_table=11 NC_005810.1 RefSeq gene 3752621 3753466 . - . ID=gene3494;Name=YP_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17515;old_locus_tag=YP3351%2CYP_3351 NC_005810.1 Protein Homology CDS 3752621 3753466 . - 0 ID=cds3400;Parent=gene3494;Dbxref=Genbank:WP_002209547.1;Name=WP_002209547.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=WP_002209547.1;transl_table=11 NC_005810.1 RefSeq gene 3753685 3753885 . + . ID=gene3495;Name=YP_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17520 NC_005810.1 Protein Homology CDS 3753685 3753885 . + 0 ID=cds3401;Parent=gene3495;Dbxref=Genbank:WP_002209548.1;Name=WP_002209548.1;gbkey=CDS;product=tautomerase;protein_id=WP_002209548.1;transl_table=11 NC_005810.1 RefSeq gene 3754164 3755108 . + . ID=gene3496;Name=YP_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17525;old_locus_tag=YP3353%2CYP_3353 NC_005810.1 Protein Homology CDS 3754164 3755108 . + 0 ID=cds3402;Parent=gene3496;Dbxref=Genbank:WP_002209549.1;Name=WP_002209549.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NC_005810.1 RefSeq gene 3755272 3756771 . - . ID=gene3497;Name=YP_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17530;old_locus_tag=YP3354%2CYP_3354 NC_005810.1 Protein Homology CDS 3755272 3756771 . - 0 ID=cds3403;Parent=gene3497;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11 NC_005810.1 RefSeq gene 3757136 3758425 . - . ID=gene3498;Name=YP_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17535;old_locus_tag=YP3355%2CYP_3355 NC_005810.1 Protein Homology CDS 3757136 3758425 . - 0 ID=cds3404;Parent=gene3498;Dbxref=Genbank:WP_002209553.1;Name=WP_002209553.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_002209553.1;transl_table=11 NC_005810.1 RefSeq gene 3758880 3759359 . - . ID=gene3499;Name=YP_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17540;old_locus_tag=YP3356%2CYP_3356 NC_005810.1 Protein Homology CDS 3758880 3759359 . - 0 ID=cds3405;Parent=gene3499;Dbxref=Genbank:WP_002209554.1;Name=WP_002209554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209554.1;transl_table=11 NC_005810.1 RefSeq gene 3759484 3761202 . - . ID=gene3500;Name=YP_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17545;old_locus_tag=YP3357%2CYP_3357 NC_005810.1 Protein Homology CDS 3759484 3761202 . - 0 ID=cds3406;Parent=gene3500;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NC_005810.1 RefSeq gene 3761448 3762152 . - . ID=gene3501;Name=YP_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17550;old_locus_tag=YP3358%2CYP_3358 NC_005810.1 Protein Homology CDS 3761448 3762152 . - 0 ID=cds3407;Parent=gene3501;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11 NC_005810.1 RefSeq gene 3762792 3764774 . - . ID=gene3502;Name=YP_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17555;old_locus_tag=YP3359%2CYP_3359 NC_005810.1 Protein Homology CDS 3762792 3764774 . - 0 ID=cds3408;Parent=gene3502;Dbxref=Genbank:WP_002214767.1;Name=WP_002214767.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_002214767.1;transl_table=11 NC_005810.1 RefSeq gene 3765121 3766020 . - . ID=gene3503;Name=YP_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17560;old_locus_tag=YP3360 NC_005810.1 Protein Homology CDS 3765121 3766020 . - 0 ID=cds3409;Parent=gene3503;Dbxref=Genbank:WP_002214765.1;Name=WP_002214765.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endonuclease III;protein_id=WP_002214765.1;transl_table=11 NC_005810.1 RefSeq gene 3766339 3767346 . - . ID=gene3504;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YP_RS17565;old_locus_tag=YP3361%2CYP_3361 NC_005810.1 Protein Homology CDS 3766339 3767346 . - 0 ID=cds3410;Parent=gene3504;Dbxref=Genbank:WP_002228160.1;Name=WP_002228160.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002228160.1;transl_table=11 NC_005810.1 RefSeq gene 3767412 3768392 . - . ID=gene3505;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YP_RS17570;old_locus_tag=YP3362%2CYP_3362 NC_005810.1 Protein Homology CDS 3767412 3768392 . - 0 ID=cds3411;Parent=gene3505;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NC_005810.1 RefSeq gene 3768406 3769308 . - . ID=gene3506;Name=YP_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17575;old_locus_tag=YP3363%2CYP_3363 NC_005810.1 Protein Homology CDS 3768406 3769308 . - 0 ID=cds3412;Parent=gene3506;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11 NC_005810.1 RefSeq gene 3769390 3770337 . - . ID=gene3507;Name=YP_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17580;old_locus_tag=YP3364%2CYP_3364 NC_005810.1 Protein Homology CDS 3769390 3770337 . - 0 ID=cds3413;Parent=gene3507;Dbxref=Genbank:WP_002217330.1;Name=WP_002217330.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002217330.1;transl_table=11 NC_005810.1 RefSeq gene 3770620 3772227 . - . ID=gene3508;Name=YP_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17585;old_locus_tag=YP3365%2CYP_3365 NC_005810.1 Protein Homology CDS 3770620 3772227 . - 0 ID=cds3414;Parent=gene3508;Dbxref=Genbank:WP_002209564.1;Name=WP_002209564.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002209564.1;transl_table=11 NC_005810.1 RefSeq gene 3772630 3772836 . - . ID=gene3509;Name=YP_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17590;old_locus_tag=YP3366%2CYP_3366 NC_005810.1 Protein Homology CDS 3772630 3772836 . - 0 ID=cds3415;Parent=gene3509;Dbxref=Genbank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11 NC_005810.1 RefSeq gene 3772896 3774566 . - . ID=gene3510;Name=YP_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17595;old_locus_tag=YP3367%2CYP_3367 NC_005810.1 Protein Homology CDS 3772896 3774566 . - 0 ID=cds3416;Parent=gene3510;Dbxref=Genbank:WP_002209565.1;Name=WP_002209565.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002209565.1;transl_table=11 NC_005810.1 RefSeq gene 3774768 3776159 . - . ID=gene3511;Name=YP_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17600;old_locus_tag=YP3368%2CYP_3368 NC_005810.1 Protein Homology CDS 3774768 3776159 . - 0 ID=cds3417;Parent=gene3511;Dbxref=Genbank:WP_002224153.1;Name=WP_002224153.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002224153.1;transl_table=11 NC_005810.1 RefSeq gene 3776472 3776548 . - . ID=gene3512;Name=YP_RS17605;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS17605;old_locus_tag=tRNA-Pro_3%2CYP_t69 NC_005810.1 tRNAscan-SE tRNA 3776472 3776548 . - . ID=rna89;Parent=gene3512;anticodon=(pos:complement(3776512..3776514));gbkey=tRNA;product=tRNA-Pro NC_005810.1 tRNAscan-SE exon 3776472 3776548 . - . ID=id709;Parent=rna89;anticodon=(pos:complement(3776512..3776514));gbkey=tRNA;product=tRNA-Pro NC_005810.1 RefSeq gene 3776665 3777996 . - . ID=gene3513;Name=YP_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17610;old_locus_tag=YP3369%2CYP_3369 NC_005810.1 Protein Homology CDS 3776665 3777996 . - 0 ID=cds3418;Parent=gene3513;Dbxref=Genbank:WP_002209567.1;Name=WP_002209567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209567.1;transl_table=11 NC_005810.1 RefSeq gene 3778091 3779620 . - . ID=gene3514;Name=YP_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17615;old_locus_tag=YP3370%2CYP_3370 NC_005810.1 Protein Homology CDS 3778091 3779620 . - 0 ID=cds3419;Parent=gene3514;Dbxref=Genbank:WP_002230402.1;Name=WP_002230402.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002230402.1;transl_table=11 NC_005810.1 RefSeq gene 3779617 3780207 . - . ID=gene3515;Name=YP_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17620;old_locus_tag=YP3371 NC_005810.1 Protein Homology CDS 3779617 3780207 . - 0 ID=cds3420;Parent=gene3515;Dbxref=Genbank:WP_002209570.1;Name=WP_002209570.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209570.1;transl_table=11 NC_005810.1 RefSeq gene 3780323 3782014 . - . ID=gene3516;Name=YP_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17625;old_locus_tag=YP3372%2CYP_3372 NC_005810.1 Protein Homology CDS 3780323 3782014 . - 0 ID=cds3421;Parent=gene3516;Dbxref=Genbank:WP_002209571.1;Name=WP_002209571.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=WP_002209571.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3782213 3782239 . + . ID=id710;gbkey=repeat_region NC_005810.1 RefSeq gene 3782543 3784006 . - . ID=gene3517;Name=YP_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17630;old_locus_tag=YP3374%2CYP_3374 NC_005810.1 Protein Homology CDS 3782543 3784006 . - 0 ID=cds3422;Parent=gene3517;Dbxref=Genbank:WP_002209573.1;Name=WP_002209573.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209573.1;transl_table=11 NC_005810.1 RefSeq gene 3784474 3785760 . - . ID=gene3518;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YP_RS17635 NC_005810.1 Protein Homology CDS 3784474 3785760 . - 0 ID=cds3423;Parent=gene3518;Dbxref=Genbank:WP_002230400.1;Name=WP_002230400.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002230400.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3785730 3787688 . + . ID=id711;gbkey=repeat_region;gene=proY NC_005810.1 RefSeq region 3785734 3787686 . - . ID=id712;gbkey=mobile_element;gene=proY NC_005810.1 RefSeq gene 3785799 3786578 . - . ID=gene3519;Name=YP_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17640;old_locus_tag=YP3377%2CYP_3377 NC_005810.1 Protein Homology CDS 3785799 3786578 . - 0 ID=cds3424;Parent=gene3519;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 3786578 3787600 . - . ID=gene3520;Name=YP_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17645;old_locus_tag=YP3378%2CYP_3378 NC_005810.1 Protein Homology CDS 3786578 3787600 . - 0 ID=cds3425;Parent=gene3520;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3787956 3787993 . + . ID=id713;Note=exact repeat region containing 2 copies of a 19 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3788254 3789786 . - . ID=gene3521;Name=YP_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17650;old_locus_tag=YP3379%2CYP_3379 NC_005810.1 Protein Homology CDS 3788254 3789786 . - 0 ID=cds3426;Parent=gene3521;Dbxref=Genbank:WP_002209575.1;Name=WP_002209575.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=WP_002209575.1;transl_table=11 NC_005810.1 RefSeq gene 3789783 3791474 . - . ID=gene3522;Name=YP_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17655;old_locus_tag=YP3380%2CYP_3380 NC_005810.1 Protein Homology CDS 3789783 3791474 . - 0 ID=cds3427;Parent=gene3522;Dbxref=Genbank:WP_002209576.1;Name=WP_002209576.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11 NC_005810.1 RefSeq gene 3792201 3793145 . + . ID=gene3523;Name=YP_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17660;old_locus_tag=YP3381%2CYP_3381 NC_005810.1 Protein Homology CDS 3792201 3793145 . + 0 ID=cds3428;Parent=gene3523;Dbxref=Genbank:WP_002209577.1;Name=WP_002209577.1;gbkey=CDS;product=pyridoxal-5'-phosphate-dependent protein;protein_id=WP_002209577.1;transl_table=11 NC_005810.1 RefSeq gene 3793142 3793708 . + . ID=gene3524;Name=YP_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17665;old_locus_tag=YP3382%2CYP_3382 NC_005810.1 Protein Homology CDS 3793142 3793708 . + 0 ID=cds3429;Parent=gene3524;Dbxref=Genbank:WP_002209578.1;Name=WP_002209578.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002209578.1;transl_table=11 NC_005810.1 RefSeq gene 3793791 3794720 . + . ID=gene3525;Name=YP_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17670;old_locus_tag=YP3383%2CYP_3383 NC_005810.1 Protein Homology CDS 3793791 3794720 . + 0 ID=cds3430;Parent=gene3525;Dbxref=Genbank:WP_002209579.1;Name=WP_002209579.1;gbkey=CDS;product=transporter;protein_id=WP_002209579.1;transl_table=11 NC_005810.1 RefSeq gene 3794722 3795966 . + . ID=gene3526;Name=YP_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17675;old_locus_tag=YP3384%2CYP_3384 NC_005810.1 Protein Homology CDS 3794722 3795966 . + 0 ID=cds3431;Parent=gene3526;Dbxref=Genbank:WP_002209580.1;Name=WP_002209580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209580.1;transl_table=11 NC_005810.1 RefSeq gene 3796489 3797442 . + . ID=gene3527;Name=YP_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17680;old_locus_tag=YP3385%2CYP_3385 NC_005810.1 Protein Homology CDS 3796489 3797442 . + 0 ID=cds3432;Parent=gene3527;Dbxref=Genbank:WP_002209581.1;Name=WP_002209581.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NC_005810.1 RefSeq gene 3797452 3798411 . + . ID=gene3528;Name=YP_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17685;old_locus_tag=YP3386%2CYP_3386 NC_005810.1 Protein Homology CDS 3797452 3798411 . + 0 ID=cds3433;Parent=gene3528;Dbxref=Genbank:WP_002209582.1;Name=WP_002209582.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002209582.1;transl_table=11 NC_005810.1 RefSeq gene 3798401 3799408 . + . ID=gene3529;Name=YP_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17690;old_locus_tag=YP3387%2CYP_3387 NC_005810.1 Protein Homology CDS 3798401 3799408 . + 0 ID=cds3434;Parent=gene3529;Dbxref=Genbank:WP_002209583.1;Name=WP_002209583.1;gbkey=CDS;product=enterobactin ABC transporter permease;protein_id=WP_002209583.1;transl_table=11 NC_005810.1 RefSeq gene 3799405 3800163 . + . ID=gene3530;Name=YP_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17695;old_locus_tag=YP3388%2CYP_3388 NC_005810.1 Protein Homology CDS 3799405 3800163 . + 0 ID=cds3435;Parent=gene3530;Dbxref=Genbank:WP_002209584.1;Name=WP_002209584.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002209584.1;transl_table=11 NC_005810.1 RefSeq gene 3800160 3800660 . - . ID=gene3531;Name=YP_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17700;old_locus_tag=YP3389 NC_005810.1 Protein Homology CDS 3800160 3800660 . - 0 ID=cds3436;Parent=gene3531;Dbxref=Genbank:WP_002214364.1;Name=WP_002214364.1;gbkey=CDS;product=toxin Fic;protein_id=WP_002214364.1;transl_table=11 NC_005810.1 RefSeq gene 3800896 3801081 . - . ID=gene3532;Name=YP_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17705;old_locus_tag=YP3390%2CYP_3390 NC_005810.1 Protein Homology CDS 3800896 3801081 . - 0 ID=cds3437;Parent=gene3532;Dbxref=Genbank:WP_002214362.1;Name=WP_002214362.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214362.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3801468 3801723 . + . ID=id714;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3801707 3801754 . + . ID=id715;gbkey=repeat_region NC_005810.1 RefSeq gene 3802037 3802399 . + . ID=gene3533;Name=YP_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17710;old_locus_tag=YP3391%2CYP_3391 NC_005810.1 Protein Homology CDS 3802037 3802399 . + 0 ID=cds3438;Parent=gene3533;Dbxref=Genbank:WP_002209585.1;Name=WP_002209585.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209585.1;transl_table=11 NC_005810.1 RefSeq gene 3802661 3803077 . + . ID=gene3534;Name=YP_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17715 NC_005810.1 Protein Homology CDS 3802661 3803077 . + 0 ID=cds3439;Parent=gene3534;Dbxref=Genbank:WP_002414078.1;Name=WP_002414078.1;gbkey=CDS;product=transposase;protein_id=WP_002414078.1;transl_table=11 NC_005810.1 RefSeq gene 3803077 3803370 . + . ID=gene3535;Name=YP_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17720 NC_005810.1 Protein Homology CDS 3803077 3803370 . + 0 ID=cds3440;Parent=gene3535;Dbxref=Genbank:WP_002361323.1;Name=WP_002361323.1;gbkey=CDS;product=transposase;protein_id=WP_002361323.1;transl_table=11 NC_005810.1 RefSeq gene 3803544 3803789 . + . ID=gene3536;Name=YP_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17725;old_locus_tag=YP3393%2CYP_3393 NC_005810.1 Protein Homology CDS 3803544 3803789 . + 0 ID=cds3441;Parent=gene3536;Dbxref=Genbank:WP_002214358.1;Name=WP_002214358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214358.1;transl_table=11 NC_005810.1 RefSeq gene 3804057 3805436 . - . ID=gene3537;Name=YP_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17730;old_locus_tag=YP3394%2CYP_3394 NC_005810.1 Protein Homology CDS 3804057 3805436 . - 0 ID=cds3442;Parent=gene3537;Dbxref=Genbank:WP_002209586.1;Name=WP_002209586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209586.1;transl_table=11 NC_005810.1 RefSeq gene 3805423 3806616 . - . ID=gene3538;Name=YP_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17735;old_locus_tag=YP3395%2CYP_3395 NC_005810.1 Protein Homology CDS 3805423 3806616 . - 0 ID=cds3443;Parent=gene3538;Dbxref=Genbank:WP_002209587.1;Name=WP_002209587.1;gbkey=CDS;product=integrase;protein_id=WP_002209587.1;transl_table=11 NC_005810.1 RefSeq gene 3807002 3808195 . - . ID=gene3539;Name=YP_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17740;old_locus_tag=YP3396%2CYP_3396 NC_005810.1 Protein Homology CDS 3807002 3808195 . - 0 ID=cds3444;Parent=gene3539;Dbxref=Genbank:WP_002209588.1;Name=WP_002209588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209588.1;transl_table=11 NC_005810.1 RefSeq gene 3808285 3809469 . - . ID=gene3540;Name=YP_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17745;old_locus_tag=YP3397%2CYP_3397 NC_005810.1 Protein Homology CDS 3808285 3809469 . - 0 ID=cds3445;Parent=gene3540;Dbxref=Genbank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;product=xylose ABC transporter permease;protein_id=WP_002209589.1;transl_table=11 NC_005810.1 RefSeq gene 3809456 3810988 . - . ID=gene3541;Name=YP_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17750;old_locus_tag=YP3398%2CYP_3398 NC_005810.1 Protein Homology CDS 3809456 3810988 . - 0 ID=cds3446;Parent=gene3541;Dbxref=Genbank:WP_002209590.1;Name=WP_002209590.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=WP_002209590.1;transl_table=11 NC_005810.1 RefSeq gene 3811196 3812191 . - . ID=gene3542;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=YP_RS17755;old_locus_tag=YP3399%2CYP_3399 NC_005810.1 Protein Homology CDS 3811196 3812191 . - 0 ID=cds3447;Parent=gene3542;Dbxref=Genbank:WP_002209591.1;Name=WP_002209591.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;product=xylose ABC transporter substrate-binding protein;protein_id=WP_002209591.1;transl_table=11 NC_005810.1 RefSeq gene 3812654 3813973 . + . ID=gene3543;Name=YP_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17760;old_locus_tag=YP3400%2CYP_3400 NC_005810.1 Protein Homology CDS 3812654 3813973 . + 0 ID=cds3448;Parent=gene3543;Dbxref=Genbank:WP_002209593.1;Name=WP_002209593.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NC_005810.1 RefSeq gene 3814097 3815551 . + . ID=gene3544;Name=YP_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17765;old_locus_tag=YP3401%2CYP_3401 NC_005810.1 Protein Homology CDS 3814097 3815551 . + 0 ID=cds3449;Parent=gene3544;Dbxref=Genbank:WP_002209594.1;Name=WP_002209594.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulokinase;protein_id=WP_002209594.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3815546 3815602 . + . ID=id716;Note=degenerate repeat region containing 3 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3815669 3816655 . - . ID=gene3545;Name=YP_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17770;old_locus_tag=YP3402%2CYP_3402 NC_005810.1 Protein Homology CDS 3815669 3816655 . - 0 ID=cds3450;Parent=gene3545;Dbxref=Genbank:WP_002209595.1;Name=WP_002209595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209595.1;transl_table=11 NC_005810.1 RefSeq gene 3816694 3817461 . - . ID=gene3546;Name=YP_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17775;old_locus_tag=YP3403%2CYP_3403 NC_005810.1 Protein Homology CDS 3816694 3817461 . - 0 ID=cds3451;Parent=gene3546;Dbxref=Genbank:WP_002209596.1;Name=WP_002209596.1;gbkey=CDS;product=fimbrial chaperone protein StdC;protein_id=WP_002209596.1;transl_table=11 NC_005810.1 RefSeq gene 3817554 3820044 . - . ID=gene3547;Name=YP_RS17785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS17785;old_locus_tag=YP3405%2CYP_3405;pseudo=true NC_005810.1 Protein Homology CDS 3817554 3820044 . - 0 ID=cds3452;Parent=gene3547;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fimbrial protein;pseudo=true;transl_except=(pos:complement(3818202..3818204)%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 3820120 3820677 . - . ID=gene3548;Name=YP_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17790;old_locus_tag=YP3406%2CYP_3406 NC_005810.1 Protein Homology CDS 3820120 3820677 . - 0 ID=cds3453;Parent=gene3548;Dbxref=Genbank:WP_002209597.1;Name=WP_002209597.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209597.1;transl_table=11 NC_005810.1 RefSeq gene 3821559 3822551 . - . ID=gene3549;Name=YP_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17795;old_locus_tag=YP3407%2CYP_3407 NC_005810.1 Protein Homology CDS 3821559 3822551 . - 0 ID=cds3454;Parent=gene3549;Dbxref=Genbank:WP_002209600.1;Name=WP_002209600.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=O-acetyltransferase;protein_id=WP_002209600.1;transl_table=11 NC_005810.1 RefSeq gene 3822548 3822748 . - . ID=gene3550;Name=YP_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17800 NC_005810.1 Protein Homology CDS 3822548 3822748 . - 0 ID=cds3455;Parent=gene3550;Dbxref=Genbank:WP_002209601.1;Name=WP_002209601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209601.1;transl_table=11 NC_005810.1 RefSeq region 3822755 3824268 . + . ID=id717;gbkey=mobile_element NC_005810.1 RefSeq repeat_region 3822783 3824311 . + . ID=id718;gbkey=repeat_region NC_005810.1 RefSeq gene 3822914 3823429 . + . ID=gene3551;Name=YP_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17805;old_locus_tag=YP3408 NC_005810.1 Protein Homology CDS 3822914 3823429 . + 0 ID=cds3456;Parent=gene3551;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_005810.1 RefSeq gene 3823483 3824268 . + . ID=gene3552;Name=YP_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17810;old_locus_tag=YP3409%2CYP_3409 NC_005810.1 Protein Homology CDS 3823483 3824268 . + 0 ID=cds3457;Parent=gene3552;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3824361 3824396 . + . ID=id719;Note=exact repeat region containing 3 copies of a 12 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3824464 3827031 . - . ID=gene3553;Name=YP_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17815;old_locus_tag=YP3410%2CYP_3410 NC_005810.1 Protein Homology CDS 3824464 3827031 . - 0 ID=cds3458;Parent=gene3553;Dbxref=Genbank:WP_011193038.1;Name=WP_011193038.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_011193038.1;transl_table=11 NC_005810.1 RefSeq gene 3827470 3828747 . + . ID=gene3554;Name=YP_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17820;old_locus_tag=YP3411%2CYP_3411 NC_005810.1 Protein Homology CDS 3827470 3828747 . + 0 ID=cds3459;Parent=gene3554;Dbxref=Genbank:WP_011171949.1;Name=WP_011171949.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_011171949.1;transl_table=11 NC_005810.1 RefSeq gene 3828760 3831879 . + . ID=gene3555;Name=YP_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17825;old_locus_tag=YP3412%2CYP_3412 NC_005810.1 Protein Homology CDS 3828760 3831879 . + 0 ID=cds3460;Parent=gene3555;Dbxref=Genbank:WP_002211642.1;Name=WP_002211642.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_002211642.1;transl_table=11 NC_005810.1 RefSeq gene 3832014 3833504 . - . ID=gene3556;Name=YP_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17830;old_locus_tag=YP3413%2CYP_3413 NC_005810.1 Protein Homology CDS 3832014 3833504 . - 0 ID=cds3461;Parent=gene3556;Dbxref=Genbank:WP_002211641.1;Name=WP_002211641.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002211641.1;transl_table=11 NC_005810.1 RefSeq gene 3833782 3834369 . + . ID=gene3557;Name=YP_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17835;old_locus_tag=YP3414%2CYP_3414 NC_005810.1 Protein Homology CDS 3833782 3834369 . + 0 ID=cds3462;Parent=gene3557;Dbxref=Genbank:WP_002211640.1;Name=WP_002211640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211640.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3834408 3834471 . + . ID=id720;Note=degenerate repeat region containing 4 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3835223 3846340 . + . ID=gene3558;Name=YP_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17840;old_locus_tag=YP3415%2CYP_3415 NC_005810.1 Protein Homology CDS 3835223 3846340 . + 0 ID=cds3463;Parent=gene3558;Dbxref=Genbank:WP_002230497.1;Name=WP_002230497.1;gbkey=CDS;product=autotransporter;protein_id=WP_002230497.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3838454 3838782 . + . ID=id721;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3839112 3839740 . + . ID=id722;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3840261 3840646 . + . ID=id723;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3840971 3841426 . + . ID=id724;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3842070 3842455 . + . ID=id725;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3842760 3843388 . + . ID=id726;gbkey=repeat_region NC_005810.1 RefSeq gene 3846443 3848323 . - . ID=gene3559;Name=YP_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17845;old_locus_tag=YP3416%2CYP_3416 NC_005810.1 Protein Homology CDS 3846443 3848323 . - 0 ID=cds3464;Parent=gene3559;Dbxref=Genbank:WP_002211637.1;Name=WP_002211637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211637.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3848191 3848415 . + . ID=id727;gbkey=repeat_region NC_005810.1 RefSeq gene 3848886 3849761 . - . ID=gene3560;Name=YP_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17850;old_locus_tag=YP3417%2CYP_3417 NC_005810.1 Protein Homology CDS 3848886 3849761 . - 0 ID=cds3465;Parent=gene3560;Dbxref=Genbank:WP_002214025.1;Name=WP_002214025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214025.1;transl_table=11 NC_005810.1 RefSeq gene 3849970 3851787 . - . ID=gene3561;Name=YP_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17855;old_locus_tag=YP3418%2CYP_3418 NC_005810.1 Protein Homology CDS 3849970 3851787 . - 0 ID=cds3466;Parent=gene3561;Dbxref=Genbank:WP_002211636.1;Name=WP_002211636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211636.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3851655 3851879 . + . ID=id728;gbkey=repeat_region NC_005810.1 RefSeq gene 3852506 3854062 . + . ID=gene3562;Name=YP_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17860;old_locus_tag=YP3420%2CYP_3420 NC_005810.1 Protein Homology CDS 3852506 3854062 . + 0 ID=cds3467;Parent=gene3562;Dbxref=Genbank:WP_002211634.1;Name=WP_002211634.1;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=WP_002211634.1;transl_table=11 NC_005810.1 RefSeq gene 3854453 3855685 . + . ID=gene3563;Name=YP_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17865;old_locus_tag=YP3421%2CYP_3421 NC_005810.1 Protein Homology CDS 3854453 3855685 . + 0 ID=cds3468;Parent=gene3563;Dbxref=Genbank:WP_002211633.1;Name=WP_002211633.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_002211633.1;transl_table=11 NC_005810.1 RefSeq gene 3856073 3858145 . + . ID=gene3564;Name=YP_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17870;old_locus_tag=YP3422%2CYP_3422 NC_005810.1 Protein Homology CDS 3856073 3858145 . + 0 ID=cds3469;Parent=gene3564;Dbxref=Genbank:WP_002211632.1;Name=WP_002211632.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_002211632.1;transl_table=11 NC_005810.1 RefSeq gene 3858296 3861634 . + . ID=gene3565;Name=YP_RS17875;end_range=3861634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS17875;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 3858296 3861634 . + 0 ID=cds3470;Parent=gene3565;end_range=3861634,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=peptide synthetase;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 3861574 3861681 . + . ID=id729;Note=degenerate repeat region containing 2 copies of a 54bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3861773 3868231 . + . ID=gene3566;Name=YP_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17880;old_locus_tag=YP3423 NC_005810.1 Protein Homology CDS 3861773 3868231 . + 0 ID=cds3471;Parent=gene3566;Dbxref=Genbank:WP_002211387.1;Name=WP_002211387.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002211387.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3864227 3864256 . + . ID=id730;Note=exact repeat region containing 2 copies of a 15 bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3866427 3866462 . + . ID=id731;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3866810 3866839 . + . ID=id732;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3868239 3869927 . + . ID=gene3567;Name=YP_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17885;old_locus_tag=YP3424%2CYP_3424 NC_005810.1 Protein Homology CDS 3868239 3869927 . + 0 ID=cds3472;Parent=gene3567;Dbxref=Genbank:WP_002214915.1;Name=WP_002214915.1;gbkey=CDS;product=high molecular weight siderophore biosynthesis protein;protein_id=WP_002214915.1;transl_table=11 NC_005810.1 RefSeq gene 3869940 3875768 . + . ID=gene3568;Name=YP_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17890;old_locus_tag=YP3425%2CYP_3425 NC_005810.1 Protein Homology CDS 3869940 3875768 . + 0 ID=cds3473;Parent=gene3568;Dbxref=Genbank:WP_011171952.1;Name=WP_011171952.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_011171952.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3871433 3871468 . + . ID=id733;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3872930 3873154 . + . ID=id734;Note=degenerate repeat region containing 25 copies of a 9bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3874828 3874881 . + . ID=id735;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3875765 3876835 . + . ID=gene3569;Name=YP_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17895;old_locus_tag=YP3426%2CYP_3426 NC_005810.1 Protein Homology CDS 3875765 3876835 . + 0 ID=cds3474;Parent=gene3569;Dbxref=Genbank:WP_002224891.1;Name=WP_002224891.1;gbkey=CDS;product=saccharopine dehydrogenase;protein_id=WP_002224891.1;transl_table=11 NC_005810.1 RefSeq gene 3876832 3877959 . + . ID=gene3570;Name=YP_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17900;old_locus_tag=YP3427%2CYP_3427 NC_005810.1 Protein Homology CDS 3876832 3877959 . + 0 ID=cds3475;Parent=gene3570;Dbxref=Genbank:WP_002211390.1;Name=WP_002211390.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_002211390.1;transl_table=11 NC_005810.1 RefSeq gene 3877952 3878716 . + . ID=gene3571;Name=YP_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17905;old_locus_tag=YP3428%2CYP_3428 NC_005810.1 Protein Homology CDS 3877952 3878716 . + 0 ID=cds3476;Parent=gene3571;Dbxref=Genbank:WP_002214925.1;Name=WP_002214925.1;gbkey=CDS;product=thioesterase;protein_id=WP_002214925.1;transl_table=11 NC_005810.1 RefSeq gene 3878706 3880010 . + . ID=gene3572;Name=YP_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17910;old_locus_tag=YP3429%2CYP_3429 NC_005810.1 Protein Homology CDS 3878706 3880010 . + 0 ID=cds3477;Parent=gene3572;Dbxref=Genbank:WP_002211392.1;Name=WP_002211392.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211392.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3878728 3878781 . + . ID=id736;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3880010 3881782 . + . ID=gene3573;Name=YP_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17915;old_locus_tag=YP3430%2CYP_3430 NC_005810.1 Protein Homology CDS 3880010 3881782 . + 0 ID=cds3478;Parent=gene3573;Dbxref=Genbank:WP_002214927.1;Name=WP_002214927.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_002214927.1;transl_table=11 NC_005810.1 RefSeq gene 3881775 3883532 . + . ID=gene3574;Name=YP_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17920;old_locus_tag=YP3431%2CYP_3431 NC_005810.1 Protein Homology CDS 3881775 3883532 . + 0 ID=cds3479;Parent=gene3574;Dbxref=Genbank:WP_002211394.1;Name=WP_002211394.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_002211394.1;transl_table=11 NC_005810.1 RefSeq gene 3883855 3884730 . - . ID=gene3575;Name=YP_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17925;old_locus_tag=YP3432%2CYP_3432 NC_005810.1 Protein Homology CDS 3883855 3884730 . - 0 ID=cds3480;Parent=gene3575;Dbxref=Genbank:WP_002211395.1;Name=WP_002211395.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211395.1;transl_table=11 NC_005810.1 RefSeq gene 3885166 3885564 . - . ID=gene3576;Name=YP_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17930;old_locus_tag=YP3433%2CYP_3433 NC_005810.1 Protein Homology CDS 3885166 3885564 . - 0 ID=cds3481;Parent=gene3576;Dbxref=Genbank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3886678 3886717 . + . ID=id737;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3887104 3888447 . + . ID=gene3577;Name=YP_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17935;old_locus_tag=YP3434%2CYP_3434 NC_005810.1 Protein Homology CDS 3887104 3888447 . + 0 ID=cds3482;Parent=gene3577;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3888486 3888515 . + . ID=id738;Note=degenerate repeat region containing 2 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3889448 3891106 . + . ID=gene3578;Name=YP_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17940 NC_005810.1 Protein Homology CDS 3889448 3891106 . + 0 ID=cds3483;Parent=gene3578;Dbxref=Genbank:WP_002213742.1;Name=WP_002213742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213742.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3891100 3893261 . + . ID=id739;gbkey=repeat_region NC_005810.1 RefSeq gene 3891211 3893211 . + . ID=gene3579;Name=YP_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17945 NC_005810.1 Protein Homology CDS 3891211 3893211 . + 0 ID=cds3484;Parent=gene3579;Dbxref=Genbank:WP_002228666.1;Name=WP_002228666.1;gbkey=CDS;product=adhesin;protein_id=WP_002228666.1;transl_table=11 NC_005810.1 RefSeq gene 3893867 3897637 . + . ID=gene3580;Name=YP_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17950;old_locus_tag=YP3436%2CYP_3436 NC_005810.1 Protein Homology CDS 3893867 3897637 . + 0 ID=cds3485;Parent=gene3580;Dbxref=Genbank:WP_002211399.1;Name=WP_002211399.1;gbkey=CDS;product=autotransporter;protein_id=WP_002211399.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3895526 3897687 . + . ID=id740;gbkey=repeat_region NC_005810.1 RefSeq gene 3898223 3900448 . + . ID=gene3581;Name=YP_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17955;old_locus_tag=YP3437%2CYP_3437 NC_005810.1 Protein Homology CDS 3898223 3900448 . + 0 ID=cds3486;Parent=gene3581;Dbxref=Genbank:WP_002211400.1;Name=WP_002211400.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002211400.1;transl_table=11 NC_005810.1 RefSeq gene 3900474 3901793 . + . ID=gene3582;Name=YP_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17960;old_locus_tag=YP3438%2CYP_3438 NC_005810.1 Protein Homology CDS 3900474 3901793 . + 0 ID=cds3487;Parent=gene3582;Dbxref=Genbank:WP_002211401.1;Name=WP_002211401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211401.1;transl_table=11 NC_005810.1 RefSeq gene 3901807 3906123 . + . ID=gene3583;Name=YP_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17965;old_locus_tag=YP3439%2CYP_3439 NC_005810.1 Protein Homology CDS 3901807 3906123 . + 0 ID=cds3488;Parent=gene3583;Dbxref=Genbank:WP_002211402.1;Name=WP_002211402.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002211402.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3906245 3906268 . + . ID=id741;gbkey=repeat_region NC_005810.1 RefSeq gene 3906406 3906648 . + . ID=gene3584;Name=YP_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17970;old_locus_tag=YP3440%2CYP_3440 NC_005810.1 Protein Homology CDS 3906406 3906648 . + 0 ID=cds3489;Parent=gene3584;Dbxref=Genbank:WP_002211403.1;Name=WP_002211403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211403.1;transl_table=11 NC_005810.1 RefSeq gene 3907192 3907605 . + . ID=gene3585;Name=YP_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17975;old_locus_tag=YP3441%2CYP_3441 NC_005810.1 Protein Homology CDS 3907192 3907605 . + 0 ID=cds3490;Parent=gene3585;Dbxref=Genbank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211404.1;transl_table=11 NC_005810.1 RefSeq gene 3907785 3909164 . - . ID=gene3586;Name=YP_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17980;old_locus_tag=YP3442%2CYP_3442 NC_005810.1 Protein Homology CDS 3907785 3909164 . - 0 ID=cds3491;Parent=gene3586;Dbxref=Genbank:WP_002223680.1;Name=WP_002223680.1;gbkey=CDS;product=transporter divalent anion:Na+ symporter (DASS) family;protein_id=WP_002223680.1;transl_table=11 NC_005810.1 RefSeq gene 3909446 3910465 . - . ID=gene3587;Name=YP_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17985;old_locus_tag=YP3443%2CYP_3443 NC_005810.1 Protein Homology CDS 3909446 3910465 . - 0 ID=cds3492;Parent=gene3587;Dbxref=Genbank:WP_002211406.1;Name=WP_002211406.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211406.1;transl_table=11 NC_005810.1 RefSeq gene 3910759 3911832 . + . ID=gene3588;Name=YP_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17990;old_locus_tag=YP3444%2CYP_3444 NC_005810.1 Protein Homology CDS 3910759 3911832 . + 0 ID=cds3493;Parent=gene3588;Dbxref=Genbank:WP_016256295.1;Name=WP_016256295.1;gbkey=CDS;product=beta-1%2C4-xylanase;protein_id=WP_016256295.1;transl_table=11 NC_005810.1 RefSeq gene 3911994 3913418 . + . ID=gene3589;Name=YP_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS17995;old_locus_tag=YP3445%2CYP_3445 NC_005810.1 Protein Homology CDS 3911994 3913418 . + 0 ID=cds3494;Parent=gene3589;Dbxref=Genbank:WP_002211645.1;Name=WP_002211645.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_002211645.1;transl_table=11 NC_005810.1 RefSeq gene 3913677 3915857 . - . ID=gene3590;Name=YP_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18000;old_locus_tag=YP3446%2CYP_3446 NC_005810.1 Protein Homology CDS 3913677 3915857 . - 0 ID=cds3495;Parent=gene3590;Dbxref=Genbank:WP_002211646.1;Name=WP_002211646.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002211646.1;transl_table=11 NC_005810.1 RefSeq gene 3915929 3917257 . - . ID=gene3591;Name=YP_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18005;old_locus_tag=YP3447%2CYP_3447 NC_005810.1 Protein Homology CDS 3915929 3917257 . - 0 ID=cds3496;Parent=gene3591;Dbxref=Genbank:WP_002224898.1;Name=WP_002224898.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_002224898.1;transl_table=11 NC_005810.1 RefSeq gene 3917254 3919002 . - . ID=gene3592;Name=YP_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18010;old_locus_tag=YP3448%2CYP_3448 NC_005810.1 Protein Homology CDS 3917254 3919002 . - 0 ID=cds3497;Parent=gene3592;Dbxref=Genbank:WP_002211648.1;Name=WP_002211648.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_002211648.1;transl_table=11 NC_005810.1 RefSeq gene 3918999 3919949 . - . ID=gene3593;Name=YP_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18015;old_locus_tag=YP3449%2CYP_3449 NC_005810.1 Protein Homology CDS 3918999 3919949 . - 0 ID=cds3498;Parent=gene3593;Dbxref=Genbank:WP_002211649.1;Name=WP_002211649.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_002211649.1;transl_table=11 NC_005810.1 RefSeq gene 3919933 3921003 . - . ID=gene3594;Name=YP_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18020 NC_005810.1 Protein Homology CDS 3919933 3921003 . - 0 ID=cds3499;Parent=gene3594;Dbxref=Genbank:WP_002228662.1;Name=WP_002228662.1;gbkey=CDS;product=aerobactin siderophore biosynthesis proteiniucA;protein_id=WP_002228662.1;transl_table=11 NC_005810.1 RefSeq gene 3921096 3921704 . - . ID=gene3595;Name=YP_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18025 NC_005810.1 Protein Homology CDS 3921096 3921704 . - 0 ID=cds3500;Parent=gene3595;Dbxref=Genbank:WP_002214005.1;Name=WP_002214005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214005.1;transl_table=11 NC_005810.1 RefSeq gene 3921844 3923067 . + . ID=gene3596;Name=YP_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18030;old_locus_tag=YP3451%2CYP_3451 NC_005810.1 Protein Homology CDS 3921844 3923067 . + 0 ID=cds3501;Parent=gene3596;Dbxref=Genbank:WP_002211651.1;Name=WP_002211651.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211651.1;transl_table=11 NC_005810.1 RefSeq gene 3923357 3924190 . - . ID=gene3597;Name=YP_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18035;old_locus_tag=YP3452%2CYP_3452 NC_005810.1 Protein Homology CDS 3923357 3924190 . - 0 ID=cds3502;Parent=gene3597;Dbxref=Genbank:WP_002211652.1;Name=WP_002211652.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002211652.1;transl_table=11 NC_005810.1 RefSeq gene 3924567 3925943 . - . ID=gene3598;Name=YP_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18040;old_locus_tag=YP3453%2CYP_3453 NC_005810.1 Protein Homology CDS 3924567 3925943 . - 0 ID=cds3503;Parent=gene3598;Dbxref=Genbank:WP_002211654.1;Name=WP_002211654.1;gbkey=CDS;product=peptidase;protein_id=WP_002211654.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3925270 3925323 . + . ID=id742;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3926511 3927254 . + . ID=gene3599;Name=YP_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18045;old_locus_tag=YP3454%2CYP_3454 NC_005810.1 Protein Homology CDS 3926511 3927254 . + 0 ID=cds3504;Parent=gene3599;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NC_005810.1 RefSeq gene 3927235 3927885 . - . ID=gene3600;Name=YP_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18050;old_locus_tag=YP3455%2CYP_3455 NC_005810.1 Protein Homology CDS 3927235 3927885 . - 0 ID=cds3505;Parent=gene3600;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NC_005810.1 RefSeq gene 3929055 3929705 . + . ID=gene3601;Name=YP_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18055;old_locus_tag=YP3456%2CYP_3456 NC_005810.1 Protein Homology CDS 3929055 3929705 . + 0 ID=cds3506;Parent=gene3601;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11 NC_005810.1 RefSeq gene 3930156 3930551 . + . ID=gene3602;Name=YP_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18060;old_locus_tag=YP3457%2CYP_3457 NC_005810.1 Protein Homology CDS 3930156 3930551 . + 0 ID=cds3507;Parent=gene3602;Dbxref=Genbank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11 NC_005810.1 RefSeq gene 3930619 3930882 . + . ID=gene3603;Name=YP_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18065;old_locus_tag=YP3458%2CYP_3458 NC_005810.1 Protein Homology CDS 3930619 3930882 . + 0 ID=cds3508;Parent=gene3603;Dbxref=Genbank:WP_002215899.1;Name=WP_002215899.1;gbkey=CDS;product=transposase;protein_id=WP_002215899.1;transl_table=11 NC_005810.1 RefSeq gene 3931056 3931427 . + . ID=gene3604;Name=YP_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18070;old_locus_tag=YP3460%2CYP_3460 NC_005810.1 Protein Homology CDS 3931056 3931427 . + 0 ID=cds3509;Parent=gene3604;Dbxref=Genbank:WP_002215898.1;Name=WP_002215898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215898.1;transl_table=11 NC_005810.1 RefSeq gene 3931470 3931625 . + . ID=gene3605;Name=YP_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18075 NC_005810.1 Protein Homology CDS 3931470 3931625 . + 0 ID=cds3510;Parent=gene3605;Dbxref=Genbank:WP_002211661.1;Name=WP_002211661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211661.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3932400 3939274 . + . ID=id743;gbkey=repeat_region NC_005810.1 RefSeq gene 3932827 3933327 . + . ID=gene3606;Name=YP_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18080;old_locus_tag=YP3461%2CYP_3461 NC_005810.1 Protein Homology CDS 3932827 3933327 . + 0 ID=cds3511;Parent=gene3606;Dbxref=Genbank:WP_002230478.1;Name=WP_002230478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230478.1;transl_table=11 NC_005810.1 RefSeq gene 3933370 3934920 . + . ID=gene3607;Name=YP_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18085;old_locus_tag=YP3462%2CYP_3462 NC_005810.1 Protein Homology CDS 3933370 3934920 . + 0 ID=cds3512;Parent=gene3607;Dbxref=Genbank:WP_002214707.1;Name=WP_002214707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214707.1;transl_table=11 NC_005810.1 RefSeq gene 3934932 3936284 . + . ID=gene3608;Name=YP_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18090;old_locus_tag=YP3463%2CYP_3463 NC_005810.1 Protein Homology CDS 3934932 3936284 . + 0 ID=cds3513;Parent=gene3608;Dbxref=Genbank:WP_002213011.1;Name=WP_002213011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213011.1;transl_table=11 NC_005810.1 RefSeq gene 3936281 3936967 . + . ID=gene3609;Name=YP_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18095;old_locus_tag=YP3464%2CYP_3464 NC_005810.1 Protein Homology CDS 3936281 3936967 . + 0 ID=cds3514;Parent=gene3609;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_005810.1 RefSeq gene 3936967 3938703 . + . ID=gene3610;Name=YP_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18100;old_locus_tag=YP3465%2CYP_3465 NC_005810.1 Protein Homology CDS 3936967 3938703 . + 0 ID=cds3515;Parent=gene3610;Dbxref=Genbank:WP_002228049.1;Name=WP_002228049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228049.1;transl_table=11 NC_005810.1 RefSeq gene 3938707 3939198 . + . ID=gene3611;Name=YP_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18105;old_locus_tag=YP3466%2CYP_3466 NC_005810.1 Protein Homology CDS 3938707 3939198 . + 0 ID=cds3516;Parent=gene3611;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3939597 3941301 . + . ID=id744;gbkey=repeat_region NC_005810.1 RefSeq gene 3939616 3942264 . + . ID=gene3612;Name=YP_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18110;old_locus_tag=YP3467%2CYP_3467 NC_005810.1 Protein Homology CDS 3939616 3942264 . + 0 ID=cds3517;Parent=gene3612;Dbxref=Genbank:WP_011171956.1;Name=WP_011171956.1;gbkey=CDS;product=ATPase;protein_id=WP_011171956.1;transl_table=11 NC_005810.1 RefSeq gene 3942261 3944609 . + . ID=gene3613;Name=YP_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18115;old_locus_tag=YP3468%2CYP_3468 NC_005810.1 Protein Homology CDS 3942261 3944609 . + 0 ID=cds3518;Parent=gene3613;Dbxref=Genbank:WP_011171957.1;Name=WP_011171957.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_011171957.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3943968 3944524 . + . ID=id745;gbkey=repeat_region NC_005810.1 RefSeq gene 3944624 3946846 . + . ID=gene3614;Name=YP_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18120;old_locus_tag=YP3469%2CYP_3469 NC_005810.1 Protein Homology CDS 3944624 3946846 . + 0 ID=cds3519;Parent=gene3614;Dbxref=Genbank:WP_002210011.1;Name=WP_002210011.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_002210011.1;transl_table=11 NC_005810.1 RefSeq gene 3946991 3947347 . + . ID=gene3615;Name=YP_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18125;old_locus_tag=YP3470 NC_005810.1 Protein Homology CDS 3946991 3947347 . + 0 ID=cds3520;Parent=gene3615;Dbxref=Genbank:WP_016257642.1;Name=WP_016257642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257642.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3947048 3947074 . + . ID=id746;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3947479 3947518 . + . ID=id747;Note=exact repeat region containing 4 copies of a 10 bp unit. 4 x ATTTTCAATC repeats;gbkey=repeat_region NC_005810.1 RefSeq gene 3947531 3947725 . + . ID=gene3616;Name=YP_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18130;old_locus_tag=YP3471%2CYP_3471 NC_005810.1 Protein Homology CDS 3947531 3947725 . + 0 ID=cds3521;Parent=gene3616;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3947693 3948326 . + . ID=id748;gbkey=repeat_region NC_005810.1 RefSeq gene 3947754 3948029 . + . ID=gene3617;Name=YP_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18135;old_locus_tag=YP3472%2CYP_3472 NC_005810.1 Protein Homology CDS 3947754 3948029 . + 0 ID=cds3522;Parent=gene3617;Dbxref=Genbank:WP_002216108.1;Name=WP_002216108.1;gbkey=CDS;product=transposase;protein_id=WP_002216108.1;transl_table=11 NC_005810.1 RefSeq gene 3948083 3948418 . + . ID=gene3618;Name=YP_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18140;old_locus_tag=YP3473 NC_005810.1 Protein Homology CDS 3948083 3948418 . + 0 ID=cds3523;Parent=gene3618;Dbxref=Genbank:WP_002216107.1;Name=WP_002216107.1;gbkey=CDS;product=transposase;protein_id=WP_002216107.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3948340 3951067 . + . ID=id749;gbkey=repeat_region NC_005810.1 RefSeq gene 3948950 3949585 . + . ID=gene3619;Name=YP_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18145;old_locus_tag=YP3474%2CYP_3474 NC_005810.1 Protein Homology CDS 3948950 3949585 . + 0 ID=cds3524;Parent=gene3619;Dbxref=Genbank:WP_002210010.1;Name=WP_002210010.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210010.1;transl_table=11 NC_005810.1 RefSeq gene 3949601 3951898 . + . ID=gene3620;Name=YP_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18150;old_locus_tag=YP3475%2CYP_3475 NC_005810.1 Protein Homology CDS 3949601 3951898 . + 0 ID=cds3525;Parent=gene3620;Dbxref=Genbank:WP_002210009.1;Name=WP_002210009.1;gbkey=CDS;product=kinase;protein_id=WP_002210009.1;transl_table=11 NC_005810.1 RefSeq gene 3951885 3952652 . + . ID=gene3621;Name=YP_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18155;old_locus_tag=YP3476%2CYP_3476 NC_005810.1 Protein Homology CDS 3951885 3952652 . + 0 ID=cds3526;Parent=gene3621;Dbxref=Genbank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3952687 3953321 . + . ID=id750;gbkey=repeat_region NC_005810.1 RefSeq gene 3952901 3953023 . + . ID=gene3622;Name=YP_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18160 NC_005810.1 Protein Homology CDS 3952901 3953023 . + 0 ID=cds3527;Parent=gene3622;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NC_005810.1 RefSeq gene 3953077 3953445 . + . ID=gene3623;Name=YP_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18165;old_locus_tag=YP3478%2CYP_3478 NC_005810.1 Protein Homology CDS 3953077 3953445 . + 0 ID=cds3528;Parent=gene3623;Dbxref=Genbank:WP_002263919.1;Name=WP_002263919.1;gbkey=CDS;product=transposase;protein_id=WP_002263919.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3953443 3954645 . + . ID=id751;gbkey=repeat_region NC_005810.1 RefSeq gene 3954053 3954681 . + . ID=gene3624;Name=YP_RS18170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS18170;old_locus_tag=YP3479;pseudo=true NC_005810.1 Protein Homology CDS 3954053 3954681 . + 0 ID=cds3529;Parent=gene3624;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 3954705 3955013 . + . ID=gene3625;Name=YP_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18175;old_locus_tag=YP3480 NC_005810.1 Protein Homology CDS 3954705 3955013 . + 0 ID=cds3530;Parent=gene3625;Dbxref=Genbank:WP_002228972.1;Name=WP_002228972.1;gbkey=CDS;product=integrase;protein_id=WP_002228972.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3955261 3955364 . + . ID=id752;gbkey=repeat_region NC_005810.1 RefSeq gene 3955266 3955341 . - . ID=gene3626;Name=YP_RS18180;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS18180;old_locus_tag=tRNA-Phe_2%2CYP_t71 NC_005810.1 tRNAscan-SE tRNA 3955266 3955341 . - . ID=rna90;Parent=gene3626;anticodon=(pos:complement(3955306..3955308));gbkey=tRNA;product=tRNA-Phe NC_005810.1 tRNAscan-SE exon 3955266 3955341 . - . ID=id753;Parent=rna90;anticodon=(pos:complement(3955306..3955308));gbkey=tRNA;product=tRNA-Phe NC_005810.1 RefSeq gene 3956010 3958172 . + . ID=gene3627;Name=YP_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18185;old_locus_tag=YP3481%2CYP_3481 NC_005810.1 Protein Homology CDS 3956010 3958172 . + 0 ID=cds3531;Parent=gene3627;Dbxref=Genbank:WP_002210002.1;Name=WP_002210002.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_002210002.1;transl_table=11 NC_005810.1 RefSeq gene 3958728 3959687 . + . ID=gene3628;Name=YP_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18190;old_locus_tag=YP3482%2CYP_3482 NC_005810.1 Protein Homology CDS 3958728 3959687 . + 0 ID=cds3532;Parent=gene3628;Dbxref=Genbank:WP_002210001.1;Name=WP_002210001.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210001.1;transl_table=11 NC_005810.1 RefSeq gene 3959733 3961232 . + . ID=gene3629;Name=YP_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18195;old_locus_tag=YP3483%2CYP_3483 NC_005810.1 Protein Homology CDS 3959733 3961232 . + 0 ID=cds3533;Parent=gene3629;Dbxref=Genbank:WP_002210000.1;Name=WP_002210000.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_002210000.1;transl_table=11 NC_005810.1 RefSeq gene 3961313 3962248 . + . ID=gene3630;Name=YP_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18200;old_locus_tag=YP3484%2CYP_3484 NC_005810.1 Protein Homology CDS 3961313 3962248 . + 0 ID=cds3534;Parent=gene3630;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11 NC_005810.1 RefSeq gene 3962331 3964364 . - . ID=gene3631;Name=YP_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18205;old_locus_tag=YP3485%2CYP_3485 NC_005810.1 Protein Homology CDS 3962331 3964364 . - 0 ID=cds3535;Parent=gene3631;Dbxref=Genbank:WP_002209998.1;Name=WP_002209998.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209998.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3964417 3964461 . + . ID=id754;Note=degenerate repeat region containing 3 copies of a 15bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3964468 3965568 . - . ID=gene3632;Name=YP_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18210;old_locus_tag=YP3486%2CYP_3486 NC_005810.1 Protein Homology CDS 3964468 3965568 . - 0 ID=cds3536;Parent=gene3632;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3965787 3965822 . + . ID=id755;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 3965808 3965861 . + . ID=id756;Note=degenerate repeat region containing 3 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3965868 3966944 . - . ID=gene3633;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YP_RS18215;old_locus_tag=YP3487%2CYP_3487 NC_005810.1 Protein Homology CDS 3965868 3966944 . - 0 ID=cds3537;Parent=gene3633;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11 NC_005810.1 RefSeq gene 3967127 3967399 . - . ID=gene3634;Name=YP_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18220;old_locus_tag=YP3488%2CYP_3488 NC_005810.1 Protein Homology CDS 3967127 3967399 . - 0 ID=cds3538;Parent=gene3634;Dbxref=Genbank:WP_002230648.1;Name=WP_002230648.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002230648.1;transl_table=11 NC_005810.1 RefSeq gene 3967577 3968692 . - . ID=gene3635;Name=YP_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18225;old_locus_tag=YP3489%2CYP_3489 NC_005810.1 Protein Homology CDS 3967577 3968692 . - 0 ID=cds3539;Parent=gene3635;Dbxref=Genbank:WP_002228057.1;Name=WP_002228057.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_002228057.1;transl_table=11 NC_005810.1 RefSeq gene 3969030 3969749 . + . ID=gene3636;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=YP_RS18230;old_locus_tag=YP3490%2CYP_3490 NC_005810.1 Protein Homology CDS 3969030 3969749 . + 0 ID=cds3540;Parent=gene3636;Dbxref=Genbank:WP_002209991.1;Name=WP_002209991.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_002209991.1;transl_table=11 NC_005810.1 RefSeq gene 3969749 3970075 . + . ID=gene3637;Name=YP_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18235;old_locus_tag=YP3491%2CYP_3491 NC_005810.1 Protein Homology CDS 3969749 3970075 . + 0 ID=cds3541;Parent=gene3637;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11 NC_005810.1 RefSeq gene 3970186 3971112 . + . ID=gene3638;Name=YP_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18240;old_locus_tag=YP3492%2CYP_3492 NC_005810.1 Protein Homology CDS 3970186 3971112 . + 0 ID=cds3542;Parent=gene3638;Dbxref=Genbank:WP_002209989.1;Name=WP_002209989.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002209989.1;transl_table=11 NC_005810.1 RefSeq gene 3971224 3971754 . + . ID=gene3639;Name=YP_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18245;old_locus_tag=YP3493 NC_005810.1 Protein Homology CDS 3971224 3971754 . + 0 ID=cds3543;Parent=gene3639;Dbxref=Genbank:WP_002228656.1;Name=WP_002228656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228656.1;transl_table=11 NC_005810.1 RefSeq gene 3971727 3971957 . + . ID=gene3640;Name=YP_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18250 NC_005810.1 Protein Homology CDS 3971727 3971957 . + 0 ID=cds3544;Parent=gene3640;Dbxref=Genbank:WP_002228655.1;Name=WP_002228655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228655.1;transl_table=11 NC_005810.1 RefSeq gene 3972453 3981785 . + . ID=gene3641;Name=YP_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18255;old_locus_tag=YP3494%2CYP_3494 NC_005810.1 Protein Homology CDS 3972453 3981785 . + 0 ID=cds3545;Parent=gene3641;Dbxref=Genbank:WP_011171959.1;Name=WP_011171959.1;gbkey=CDS;product=virulence determinant;protein_id=WP_011171959.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3981828 3983145 . + . ID=id757;gbkey=repeat_region NC_005810.1 RefSeq region 3981829 3983143 . + . ID=id758;gbkey=mobile_element NC_005810.1 RefSeq gene 3981900 3983108 . + . ID=gene3642;Name=YP_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18260;old_locus_tag=YP3495%2CYP_3495 NC_005810.1 Protein Homology CDS 3981900 3983108 . + 0 ID=cds3546;Parent=gene3642;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005810.1 RefSeq gene 3983298 3984428 . - . ID=gene3643;Name=YP_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18265;old_locus_tag=YP3496%2CYP_3496 NC_005810.1 Protein Homology CDS 3983298 3984428 . - 0 ID=cds3547;Parent=gene3643;Dbxref=Genbank:WP_002209987.1;Name=WP_002209987.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002209987.1;transl_table=11 NC_005810.1 RefSeq gene 3984421 3985014 . - . ID=gene3644;Name=YP_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18270;old_locus_tag=YP3497%2CYP_3497 NC_005810.1 Protein Homology CDS 3984421 3985014 . - 0 ID=cds3548;Parent=gene3644;Dbxref=Genbank:WP_002215614.1;Name=WP_002215614.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_002215614.1;transl_table=11 NC_005810.1 RefSeq gene 3985114 3985404 . - . ID=gene3645;Name=YP_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18275;old_locus_tag=YP3498%2CYP_3498 NC_005810.1 Protein Homology CDS 3985114 3985404 . - 0 ID=cds3549;Parent=gene3645;Dbxref=Genbank:WP_002215612.1;Name=WP_002215612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215612.1;transl_table=11 NC_005810.1 RefSeq gene 3985401 3985955 . - . ID=gene3646;Name=YP_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18280;old_locus_tag=YP3499%2CYP_3499 NC_005810.1 Protein Homology CDS 3985401 3985955 . - 0 ID=cds3550;Parent=gene3646;Dbxref=Genbank:WP_002209984.1;Name=WP_002209984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209984.1;transl_table=11 NC_005810.1 RefSeq gene 3986243 3987064 . - . ID=gene3647;Name=YP_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18285;old_locus_tag=YP3500%2CYP_3500 NC_005810.1 Protein Homology CDS 3986243 3987064 . - 0 ID=cds3551;Parent=gene3647;Dbxref=Genbank:WP_002209983.1;Name=WP_002209983.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_002209983.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3987091 3987124 . + . ID=id759;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3987197 3987895 . - . ID=gene3648;Name=YP_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18290;old_locus_tag=YP3501%2CYP_3501 NC_005810.1 Protein Homology CDS 3987197 3987895 . - 0 ID=cds3552;Parent=gene3648;Dbxref=Genbank:WP_002215609.1;Name=WP_002215609.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_002215609.1;transl_table=11 NC_005810.1 RefSeq gene 3987915 3989039 . + . ID=gene3649;Name=YP_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18295;old_locus_tag=YP3502%2CYP_3502 NC_005810.1 Protein Homology CDS 3987915 3989039 . + 0 ID=cds3553;Parent=gene3649;Dbxref=Genbank:WP_002209981.1;Name=WP_002209981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209981.1;transl_table=11 NC_005810.1 RefSeq gene 3989148 3990263 . - . ID=gene3650;Name=YP_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18300;old_locus_tag=YP3503%2CYP_3503 NC_005810.1 Protein Homology CDS 3989148 3990263 . - 0 ID=cds3554;Parent=gene3650;Dbxref=Genbank:WP_002209980.1;Name=WP_002209980.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11 NC_005810.1 RefSeq gene 3990267 3991151 . - . ID=gene3651;Name=YP_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18305;old_locus_tag=YP3504%2CYP_3504 NC_005810.1 Protein Homology CDS 3990267 3991151 . - 0 ID=cds3555;Parent=gene3651;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NC_005810.1 RefSeq gene 3991331 3991753 . - . ID=gene3652;Name=YP_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18310;old_locus_tag=YP3505%2CYP_3505 NC_005810.1 Protein Homology CDS 3991331 3991753 . - 0 ID=cds3556;Parent=gene3652;Dbxref=Genbank:WP_002209978.1;Name=WP_002209978.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_002209978.1;transl_table=11 NC_005810.1 RefSeq gene 3991753 3992316 . - . ID=gene3653;Name=YP_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18315;old_locus_tag=YP3506%2CYP_3506 NC_005810.1 Protein Homology CDS 3991753 3992316 . - 0 ID=cds3557;Parent=gene3653;Dbxref=Genbank:WP_002209977.1;Name=WP_002209977.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209977.1;transl_table=11 NC_005810.1 RefSeq gene 3992432 3993391 . - . ID=gene3654;Name=YP_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18320;old_locus_tag=YP3507%2CYP_3507 NC_005810.1 Protein Homology CDS 3992432 3993391 . - 0 ID=cds3558;Parent=gene3654;Dbxref=Genbank:WP_002209976.1;Name=WP_002209976.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_002209976.1;transl_table=11 NC_005810.1 RefSeq gene 3993417 3994148 . - . ID=gene3655;Name=YP_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18325;old_locus_tag=YP3508%2CYP_3508 NC_005810.1 Protein Homology CDS 3993417 3994148 . - 0 ID=cds3559;Parent=gene3655;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11 NC_005810.1 RefSeq gene 3994400 3995107 . - . ID=gene3656;Name=YP_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18330;old_locus_tag=YP3510%2CYP_3510 NC_005810.1 Protein Homology CDS 3994400 3995107 . - 0 ID=cds3560;Parent=gene3656;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11 NC_005810.1 RefSeq gene 3995205 3995717 . - . ID=gene3657;Name=YP_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18335;old_locus_tag=YP3511%2CYP_3511 NC_005810.1 Protein Homology CDS 3995205 3995717 . - 0 ID=cds3561;Parent=gene3657;Dbxref=Genbank:WP_002228653.1;Name=WP_002228653.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_002228653.1;transl_table=11 NC_005810.1 RefSeq gene 3995910 3997064 . - . ID=gene3658;Name=YP_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18340;old_locus_tag=YP3512%2CYP_3512 NC_005810.1 Protein Homology CDS 3995910 3997064 . - 0 ID=cds3562;Parent=gene3658;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11 NC_005810.1 RefSeq repeat_region 3997647 3997682 . + . ID=id760;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 3998272 4000251 . + . ID=gene3659;Name=YP_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18345;old_locus_tag=YP3513%2CYP_3513 NC_005810.1 Protein Homology CDS 3998272 4000251 . + 0 ID=cds3563;Parent=gene3659;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NC_005810.1 RefSeq gene 4000411 4000731 . + . ID=gene3660;Name=YP_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18350;old_locus_tag=YP3514%2CYP_3514 NC_005810.1 Protein Homology CDS 4000411 4000731 . + 0 ID=cds3564;Parent=gene3660;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4000804 4000974 . + . ID=id761;gbkey=repeat_region NC_005810.1 RefSeq gene 4001021 4001773 . - . ID=gene3661;Name=YP_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18355;old_locus_tag=YP3515%2CYP_3515 NC_005810.1 Protein Homology CDS 4001021 4001773 . - 0 ID=cds3565;Parent=gene3661;Dbxref=Genbank:WP_002209967.1;Name=WP_002209967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209967.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4001871 4001904 . + . ID=id762;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4001972 4002013 . + . ID=id763;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4002264 4004258 . + . ID=gene3662;Name=YP_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18360;old_locus_tag=YP3516%2CYP_3516 NC_005810.1 Protein Homology CDS 4002264 4004258 . + 0 ID=cds3566;Parent=gene3662;Dbxref=Genbank:WP_002209965.1;Name=WP_002209965.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_002209965.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4004414 4005135 . + . ID=id764;gbkey=repeat_region NC_005810.1 RefSeq region 4004421 4005132 . + . ID=id765;gbkey=mobile_element NC_005810.1 RefSeq gene 4004566 4005024 . + . ID=gene3663;Name=YP_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18365;old_locus_tag=YP3517%2CYP_3517 NC_005810.1 Protein Homology CDS 4004566 4005024 . + 0 ID=cds3567;Parent=gene3663;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 4005365 4006381 . + . ID=gene3664;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YP_RS18370;old_locus_tag=YP3518%2CYP_3518 NC_005810.1 Protein Homology CDS 4005365 4006381 . + 0 ID=cds3568;Parent=gene3664;Dbxref=Genbank:WP_002209964.1;Name=WP_002209964.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NC_005810.1 RefSeq gene 4006484 4007647 . + . ID=gene3665;Name=YP_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18375;old_locus_tag=YP3519%2CYP_3519 NC_005810.1 Protein Homology CDS 4006484 4007647 . + 0 ID=cds3569;Parent=gene3665;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NC_005810.1 RefSeq gene 4007767 4008846 . + . ID=gene3666;Name=YP_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18380;old_locus_tag=YP3520%2CYP_3520 NC_005810.1 Protein Homology CDS 4007767 4008846 . + 0 ID=cds3570;Parent=gene3666;Dbxref=Genbank:WP_002209962.1;Name=WP_002209962.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NC_005810.1 RefSeq gene 4008878 4009168 . - . ID=gene3667;Name=YP_RS18385;gbkey=Gene;gene_biotype=other;locus_tag=YP_RS18385 NC_005810.1 RefSeq repeat_region 4008886 4009060 . + . ID=id766;gbkey=repeat_region NC_005810.1 RefSeq gene 4009284 4010153 . + . ID=gene3668;Name=YP_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18390;old_locus_tag=YP3521%2CYP_3521 NC_005810.1 Protein Homology CDS 4009284 4010153 . + 0 ID=cds3571;Parent=gene3668;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11 NC_005810.1 RefSeq gene 4010416 4010880 . + . ID=gene3669;Name=YP_RS18395;end_range=4010880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS18395;old_locus_tag=YP3522;partial=true;pseudo=true NC_005810.1 Protein Homology CDS 4010416 4010880 . + 0 ID=cds3572;Parent=gene3669;Note=Involved in the export of arginine;end_range=4010880,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=arginine transporter;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 4010878 4013588 . + . ID=id767;gbkey=repeat_region NC_005810.1 RefSeq region 4010881 4012833 . - . ID=id768;gbkey=mobile_element NC_005810.1 RefSeq gene 4010946 4011725 . - . ID=gene3670;Name=YP_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18400;old_locus_tag=YP3523%2CYP_3523 NC_005810.1 Protein Homology CDS 4010946 4011725 . - 0 ID=cds3573;Parent=gene3670;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 4011725 4012747 . - . ID=gene3671;Name=YP_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18405;old_locus_tag=YP3524%2CYP_3524 NC_005810.1 Protein Homology CDS 4011725 4012747 . - 0 ID=cds3574;Parent=gene3671;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 4012804 4013316 . + . ID=gene3672;Name=YP_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18410;old_locus_tag=YP3525%2CYP_3525 NC_005810.1 Protein Homology CDS 4012804 4013316 . + 0 ID=cds3575;Parent=gene3672;Dbxref=Genbank:WP_002209316.1;Name=WP_002209316.1;gbkey=CDS;product=transposase;protein_id=WP_002209316.1;transl_table=11 NC_005810.1 RefSeq region 4012832 4013424 . + . ID=id769;Note=partial element disrupted by IS100;gbkey=mobile_element NC_005810.1 RefSeq gene 4013768 4015321 . - . ID=gene3673;Name=YP_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18415;old_locus_tag=YP3526%2CYP_3526 NC_005810.1 Protein Homology CDS 4013768 4015321 . - 0 ID=cds3576;Parent=gene3673;Dbxref=Genbank:WP_002209873.1;Name=WP_002209873.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209873.1;transl_table=11 NC_005810.1 RefSeq gene 4016161 4016937 . + . ID=gene3674;Name=YP_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18420;old_locus_tag=YP3527%2CYP_3527 NC_005810.1 Protein Homology CDS 4016161 4016937 . + 0 ID=cds3577;Parent=gene3674;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11 NC_005810.1 RefSeq gene 4016987 4018285 . + . ID=gene3675;Name=YP_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18425;old_locus_tag=YP3528%2CYP_3528 NC_005810.1 Protein Homology CDS 4016987 4018285 . + 0 ID=cds3578;Parent=gene3675;Dbxref=Genbank:WP_002230626.1;Name=WP_002230626.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose-bisphosphate aldolase;protein_id=WP_002230626.1;transl_table=11 NC_005810.1 RefSeq gene 4018282 4019448 . + . ID=gene3676;Name=YP_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18430;old_locus_tag=YP3529%2CYP_3529 NC_005810.1 Protein Homology CDS 4018282 4019448 . + 0 ID=cds3579;Parent=gene3676;Dbxref=Genbank:WP_002209877.1;Name=WP_002209877.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_002209877.1;transl_table=11 NC_005810.1 RefSeq gene 4019466 4019963 . + . ID=gene3677;Name=YP_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18435;old_locus_tag=YP3530%2CYP_3530 NC_005810.1 Protein Homology CDS 4019466 4019963 . + 0 ID=cds3580;Parent=gene3677;Dbxref=Genbank:WP_002209878.1;Name=WP_002209878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NC_005810.1 RefSeq gene 4020010 4020798 . + . ID=gene3678;Name=YP_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18440;old_locus_tag=YP3531%2CYP_3531 NC_005810.1 Protein Homology CDS 4020010 4020798 . + 0 ID=cds3581;Parent=gene3678;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NC_005810.1 RefSeq gene 4020788 4021678 . + . ID=gene3679;Name=YP_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18445;old_locus_tag=YP3532%2CYP_3532 NC_005810.1 Protein Homology CDS 4020788 4021678 . + 0 ID=cds3582;Parent=gene3679;Dbxref=Genbank:WP_002209880.1;Name=WP_002209880.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NC_005810.1 RefSeq gene 4021764 4022204 . + . ID=gene3680;Name=YP_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18450;old_locus_tag=YP3533%2CYP_3533 NC_005810.1 Protein Homology CDS 4021764 4022204 . + 0 ID=cds3583;Parent=gene3680;Dbxref=Genbank:WP_002209881.1;Name=WP_002209881.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_002209881.1;transl_table=11 NC_005810.1 RefSeq gene 4022207 4023373 . + . ID=gene3681;Name=YP_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18455;old_locus_tag=YP3534%2CYP_3534 NC_005810.1 Protein Homology CDS 4022207 4023373 . + 0 ID=cds3584;Parent=gene3681;Dbxref=Genbank:WP_002209882.1;Name=WP_002209882.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002209882.1;transl_table=11 NC_005810.1 RefSeq gene 4023569 4024324 . + . ID=gene3682;Name=YP_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18460;old_locus_tag=YP3535%2CYP_3535 NC_005810.1 Protein Homology CDS 4023569 4024324 . + 0 ID=cds3585;Parent=gene3682;Dbxref=Genbank:WP_002230627.1;Name=WP_002230627.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002230627.1;transl_table=11 NC_005810.1 RefSeq gene 4024340 4025398 . + . ID=gene3683;Name=YP_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18465;old_locus_tag=YP3536%2CYP_3536 NC_005810.1 Protein Homology CDS 4024340 4025398 . + 0 ID=cds3586;Parent=gene3683;Dbxref=Genbank:WP_002209884.1;Name=WP_002209884.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_002209884.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4025487 4025657 . + . ID=id770;gbkey=repeat_region NC_005810.1 RefSeq gene 4025829 4027055 . + . ID=gene3684;Name=YP_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18470;old_locus_tag=YP3537%2CYP_3537 NC_005810.1 Protein Homology CDS 4025829 4027055 . + 0 ID=cds3587;Parent=gene3684;Dbxref=Genbank:WP_002209885.1;Name=WP_002209885.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002209885.1;transl_table=11 NC_005810.1 RefSeq gene 4027076 4028683 . + . ID=gene3685;Name=YP_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18475;old_locus_tag=YP3538%2CYP_3538 NC_005810.1 Protein Homology CDS 4027076 4028683 . + 0 ID=cds3588;Parent=gene3685;Dbxref=Genbank:WP_002209886.1;Name=WP_002209886.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209886.1;transl_table=11 NC_005810.1 RefSeq gene 4028806 4030293 . + . ID=gene3686;Name=YP_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18480;old_locus_tag=YP3539%2CYP_3539 NC_005810.1 Protein Homology CDS 4028806 4030293 . + 0 ID=cds3589;Parent=gene3686;Dbxref=Genbank:WP_002209887.1;Name=WP_002209887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209887.1;transl_table=11 NC_005810.1 RefSeq gene 4030403 4031257 . + . ID=gene3687;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=YP_RS18485;old_locus_tag=YP3540%2CYP_3540 NC_005810.1 Protein Homology CDS 4030403 4031257 . + 0 ID=cds3590;Parent=gene3687;Dbxref=Genbank:WP_002209888.1;Name=WP_002209888.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_002209888.1;transl_table=11 NC_005810.1 RefSeq gene 4031281 4031859 . + . ID=gene3688;Name=YP_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18490;old_locus_tag=YP3541%2CYP_3541 NC_005810.1 Protein Homology CDS 4031281 4031859 . + 0 ID=cds3591;Parent=gene3688;Dbxref=Genbank:WP_002209889.1;Name=WP_002209889.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_002209889.1;transl_table=11 NC_005810.1 RefSeq gene 4031829 4032110 . - . ID=gene3689;Name=YP_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18495;old_locus_tag=YP3542%2CYP_3542 NC_005810.1 Protein Homology CDS 4031829 4032110 . - 0 ID=cds3592;Parent=gene3689;Dbxref=Genbank:WP_002215765.1;Name=WP_002215765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215765.1;transl_table=11 NC_005810.1 RefSeq gene 4032100 4033182 . - . ID=gene3690;Name=YP_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18500;old_locus_tag=YP3543%2CYP_3543 NC_005810.1 Protein Homology CDS 4032100 4033182 . - 0 ID=cds3593;Parent=gene3690;Dbxref=Genbank:WP_002209890.1;Name=WP_002209890.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209890.1;transl_table=11 NC_005810.1 RefSeq gene 4033576 4034883 . + . ID=gene3691;Name=YP_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18505;old_locus_tag=YP3544%2CYP_3544 NC_005810.1 Protein Homology CDS 4033576 4034883 . + 0 ID=cds3594;Parent=gene3691;Dbxref=Genbank:WP_002209891.1;Name=WP_002209891.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=sugar transporter;protein_id=WP_002209891.1;transl_table=11 NC_005810.1 RefSeq gene 4035034 4037409 . + . ID=gene3692;Name=YP_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18510;old_locus_tag=YP3545%2CYP_3545 NC_005810.1 Protein Homology CDS 4035034 4037409 . + 0 ID=cds3595;Parent=gene3692;Dbxref=Genbank:WP_002209892.1;Name=WP_002209892.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_002209892.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4037452 4037623 . + . ID=id771;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4037682 4037713 . + . ID=id772;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4037722 4038795 . - . ID=gene3693;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YP_RS18515;old_locus_tag=YP3546%2CYP_3546 NC_005810.1 Protein Homology CDS 4037722 4038795 . - 0 ID=cds3596;Parent=gene3693;Dbxref=Genbank:WP_002209894.1;Name=WP_002209894.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_002209894.1;transl_table=11 NC_005810.1 RefSeq gene 4039067 4040326 . + . ID=gene3694;Name=YP_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18520;old_locus_tag=YP3547%2CYP_3547 NC_005810.1 Protein Homology CDS 4039067 4040326 . + 0 ID=cds3597;Parent=gene3694;Dbxref=Genbank:WP_011171960.1;Name=WP_011171960.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_011171960.1;transl_table=11 NC_005810.1 RefSeq gene 4040699 4041010 . - . ID=gene3695;Name=YP_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18525;old_locus_tag=YP3548 NC_005810.1 Protein Homology CDS 4040699 4041010 . - 0 ID=cds3598;Parent=gene3695;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11 NC_005810.1 RefSeq gene 4041122 4043182 . - . ID=gene3696;Name=YP_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18530;old_locus_tag=YP3549%2CYP_3549 NC_005810.1 Protein Homology CDS 4041122 4043182 . - 0 ID=cds3599;Parent=gene3696;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NC_005810.1 RefSeq gene 4043233 4044435 . - . ID=gene3697;Name=YP_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18535;old_locus_tag=YP3550%2CYP_3550 NC_005810.1 Protein Homology CDS 4043233 4044435 . - 0 ID=cds3600;Parent=gene3697;Dbxref=Genbank:WP_002209898.1;Name=WP_002209898.1;gbkey=CDS;product=galactosidase;protein_id=WP_002209898.1;transl_table=11 NC_005810.1 RefSeq gene 4044440 4045291 . - . ID=gene3698;Name=YP_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18540;old_locus_tag=YP3551%2CYP_3551 NC_005810.1 Protein Homology CDS 4044440 4045291 . - 0 ID=cds3601;Parent=gene3698;Dbxref=Genbank:WP_002209899.1;Name=WP_002209899.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NC_005810.1 RefSeq gene 4045303 4046610 . - . ID=gene3699;Name=YP_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18545;old_locus_tag=YP3552%2CYP_3552 NC_005810.1 Protein Homology CDS 4045303 4046610 . - 0 ID=cds3602;Parent=gene3699;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NC_005810.1 RefSeq gene 4046770 4048005 . - . ID=gene3700;Name=YP_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18550;old_locus_tag=YP3553%2CYP_3553 NC_005810.1 Protein Homology CDS 4046770 4048005 . - 0 ID=cds3603;Parent=gene3700;Dbxref=Genbank:WP_002209901.1;Name=WP_002209901.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_002209901.1;transl_table=11 NC_005810.1 RefSeq gene 4048368 4049474 . + . ID=gene3701;Name=YP_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18555;old_locus_tag=YP3554%2CYP_3554 NC_005810.1 Protein Homology CDS 4048368 4049474 . + 0 ID=cds3604;Parent=gene3701;Dbxref=Genbank:WP_002223743.1;Name=WP_002223743.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002223743.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4049569 4049602 . + . ID=id773;Note=exact repeat region containing 2 copies of a 17 bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4049717 4049756 . + . ID=id774;Note=exact repeat region containing 4 copies of a 10 bp unit. 4 x CACTCAATGT repeats;gbkey=repeat_region NC_005810.1 RefSeq gene 4050033 4051541 . + . ID=gene3702;Name=YP_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18560;old_locus_tag=YP3555%2CYP_3555 NC_005810.1 Protein Homology CDS 4050033 4051541 . + 0 ID=cds3605;Parent=gene3702;Dbxref=Genbank:WP_002209903.1;Name=WP_002209903.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=enolase;protein_id=WP_002209903.1;transl_table=11 NC_005810.1 RefSeq gene 4051613 4052617 . + . ID=gene3703;Name=YP_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18565;old_locus_tag=YP3556%2CYP_3556 NC_005810.1 Protein Homology CDS 4051613 4052617 . + 0 ID=cds3606;Parent=gene3703;Dbxref=Genbank:WP_002209904.1;Name=WP_002209904.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209904.1;transl_table=11 NC_005810.1 RefSeq gene 4053036 4054037 . + . ID=gene3704;Name=YP_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18570;old_locus_tag=YP3557%2CYP_3557 NC_005810.1 Protein Homology CDS 4053036 4054037 . + 0 ID=cds3607;Parent=gene3704;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11 NC_005810.1 RefSeq gene 4054816 4055334 . + . ID=gene3705;Name=YP_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18575;old_locus_tag=YP3558%2CYP_3558 NC_005810.1 Protein Homology CDS 4054816 4055334 . + 0 ID=cds3608;Parent=gene3705;Dbxref=Genbank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11 NC_005810.1 RefSeq gene 4055710 4056567 . + . ID=gene3706;Name=YP_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18580;old_locus_tag=YP3559%2CYP_3559 NC_005810.1 Protein Homology CDS 4055710 4056567 . + 0 ID=cds3609;Parent=gene3706;Dbxref=Genbank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209908.1;transl_table=11 NC_005810.1 RefSeq gene 4056991 4057671 . + . ID=gene3707;Name=YP_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18585;old_locus_tag=YP3561%2CYP_3561 NC_005810.1 Protein Homology CDS 4056991 4057671 . + 0 ID=cds3610;Parent=gene3707;Dbxref=Genbank:WP_002209909.1;Name=WP_002209909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_002209909.1;transl_table=11 NC_005810.1 RefSeq gene 4057671 4057991 . + . ID=gene3708;Name=YP_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18590;old_locus_tag=YP3562%2CYP_3562 NC_005810.1 Protein Homology CDS 4057671 4057991 . + 0 ID=cds3611;Parent=gene3708;Dbxref=Genbank:WP_002209910.1;Name=WP_002209910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209910.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4057973 4058004 . + . ID=id775;Note=exact repeat region containing 2 copies of a 16 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4058090 4058356 . - . ID=gene3709;Name=YP_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18595;old_locus_tag=YP3563%2CYP_3563 NC_005810.1 Protein Homology CDS 4058090 4058356 . - 0 ID=cds3612;Parent=gene3709;Dbxref=Genbank:WP_002209911.1;Name=WP_002209911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209911.1;transl_table=11 NC_005810.1 RefSeq gene 4058612 4059391 . - . ID=gene3710;Name=YP_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18600;old_locus_tag=YP3564%2CYP_3564 NC_005810.1 Protein Homology CDS 4058612 4059391 . - 0 ID=cds3613;Parent=gene3710;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11 NC_005810.1 RefSeq gene 4059453 4059668 . - . ID=gene3711;Name=YP_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18605;old_locus_tag=YP3565%2CYP_3565 NC_005810.1 Protein Homology CDS 4059453 4059668 . - 0 ID=cds3614;Parent=gene3711;Dbxref=Genbank:WP_011171962.1;Name=WP_011171962.1;gbkey=CDS;product=membrane protein;protein_id=WP_011171962.1;transl_table=11 NC_005810.1 RefSeq gene 4059980 4060747 . - . ID=gene3712;Name=YP_RS18610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS18610;old_locus_tag=YP3566;pseudo=true NC_005810.1 Protein Homology CDS 4059980 4060747 . - 0 ID=cds3615;Parent=gene3712;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(4060187..4060189)%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 4060717 4062876 . - . ID=gene3713;Name=YP_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18615;old_locus_tag=YP3567%2CYP_3567 NC_005810.1 Protein Homology CDS 4060717 4062876 . - 0 ID=cds3616;Parent=gene3713;Dbxref=Genbank:WP_002209914.1;Name=WP_002209914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209914.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4063113 4063476 . + . ID=id776;gbkey=repeat_region NC_005810.1 RefSeq gene 4063286 4063570 . - . ID=gene3714;Name=YP_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18620;old_locus_tag=YP3568%2CYP_3568 NC_005810.1 Protein Homology CDS 4063286 4063570 . - 0 ID=cds3617;Parent=gene3714;Dbxref=Genbank:WP_002214798.1;Name=WP_002214798.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_002214798.1;transl_table=11 NC_005810.1 RefSeq gene 4063617 4063820 . - . ID=gene3715;Name=YP_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18625;old_locus_tag=YP3569 NC_005810.1 Protein Homology CDS 4063617 4063820 . - 0 ID=cds3618;Parent=gene3715;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NC_005810.1 RefSeq gene 4064193 4064387 . - . ID=gene3716;Name=YP_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18630;old_locus_tag=YP3570%2CYP_3570 NC_005810.1 Protein Homology CDS 4064193 4064387 . - 0 ID=cds3619;Parent=gene3716;Dbxref=Genbank:WP_002214795.1;Name=WP_002214795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214795.1;transl_table=11 NC_005810.1 RefSeq gene 4064384 4065922 . - . ID=gene3717;Name=YP_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18635;old_locus_tag=YP3571%2CYP_3571 NC_005810.1 Protein Homology CDS 4064384 4065922 . - 0 ID=cds3620;Parent=gene3717;Dbxref=Genbank:WP_002214794.1;Name=WP_002214794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214794.1;transl_table=11 NC_005810.1 RefSeq gene 4066426 4067568 . - . ID=gene3718;Name=YP_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18640;old_locus_tag=YP3572%2CYP_3572 NC_005810.1 Protein Homology CDS 4066426 4067568 . - 0 ID=cds3621;Parent=gene3718;Dbxref=Genbank:WP_002209918.1;Name=WP_002209918.1;gbkey=CDS;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11 NC_005810.1 RefSeq gene 4067837 4068202 . + . ID=gene3719;Name=YP_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18645;old_locus_tag=YP3573%2CYP_3573 NC_005810.1 Protein Homology CDS 4067837 4068202 . + 0 ID=cds3622;Parent=gene3719;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NC_005810.1 RefSeq gene 4068215 4068451 . + . ID=gene3720;Name=YP_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18650;old_locus_tag=YP3574%2CYP_3574 NC_005810.1 Protein Homology CDS 4068215 4068451 . + 0 ID=cds3623;Parent=gene3720;Dbxref=Genbank:WP_002214792.1;Name=WP_002214792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214792.1;transl_table=11 NC_005810.1 RefSeq gene 4068457 4068789 . + . ID=gene3721;Name=YP_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18655;old_locus_tag=YP3575%2CYP_3575 NC_005810.1 Protein Homology CDS 4068457 4068789 . + 0 ID=cds3624;Parent=gene3721;Dbxref=Genbank:WP_002214791.1;Name=WP_002214791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214791.1;transl_table=11 NC_005810.1 RefSeq gene 4068971 4069171 . + . ID=gene3722;Name=YP_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18660;old_locus_tag=YP3576%2CYP_3576 NC_005810.1 Protein Homology CDS 4068971 4069171 . + 0 ID=cds3625;Parent=gene3722;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11 NC_005810.1 RefSeq gene 4069185 4069337 . - . ID=gene3723;Name=YP_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18665 NC_005810.1 Protein Homology CDS 4069185 4069337 . - 0 ID=cds3626;Parent=gene3723;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NC_005810.1 RefSeq gene 4069330 4069656 . - . ID=gene3724;Name=YP_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18670 NC_005810.1 Protein Homology CDS 4069330 4069656 . - 0 ID=cds3627;Parent=gene3724;Dbxref=Genbank:WP_002209922.1;Name=WP_002209922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209922.1;transl_table=11 NC_005810.1 RefSeq gene 4069956 4072247 . + . ID=gene3725;Name=YP_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18675;old_locus_tag=YP3578%2CYP_3578 NC_005810.1 Protein Homology CDS 4069956 4072247 . + 0 ID=cds3628;Parent=gene3725;Dbxref=Genbank:WP_002209923.1;Name=WP_002209923.1;gbkey=CDS;product=DNA primase;protein_id=WP_002209923.1;transl_table=11 NC_005810.1 RefSeq gene 4072647 4073045 . - . ID=gene3726;Name=YP_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18680;old_locus_tag=YP3579%2CYP_3579 NC_005810.1 Protein Homology CDS 4072647 4073045 . - 0 ID=cds3629;Parent=gene3726;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11 NC_005810.1 RefSeq gene 4073045 4073341 . - . ID=gene3727;Name=YP_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18685;old_locus_tag=YP3580%2CYP_3580 NC_005810.1 Protein Homology CDS 4073045 4073341 . - 0 ID=cds3630;Parent=gene3727;Dbxref=Genbank:WP_002214787.1;Name=WP_002214787.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214787.1;transl_table=11 NC_005810.1 RefSeq gene 4073505 4073867 . - . ID=gene3728;Name=YP_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18690;old_locus_tag=YP3581%2CYP_3581 NC_005810.1 Protein Homology CDS 4073505 4073867 . - 0 ID=cds3631;Parent=gene3728;Dbxref=Genbank:WP_002209925.1;Name=WP_002209925.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209925.1;transl_table=11 NC_005810.1 RefSeq gene 4073930 4074190 . - . ID=gene3729;Name=YP_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18695;old_locus_tag=YP3582%2CYP_3582 NC_005810.1 Protein Homology CDS 4073930 4074190 . - 0 ID=cds3632;Parent=gene3729;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4074149 4074404 . + . ID=id777;gbkey=repeat_region NC_005810.1 RefSeq gene 4074562 4074687 . + . ID=gene3730;Name=YP_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18700 NC_005810.1 Protein Homology CDS 4074562 4074687 . + 0 ID=cds3633;Parent=gene3730;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11 NC_005810.1 RefSeq gene 4074788 4074982 . + . ID=gene3731;Name=YP_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18705 NC_005810.1 Protein Homology CDS 4074788 4074982 . + 0 ID=cds3634;Parent=gene3731;Dbxref=Genbank:WP_042659217.1;Name=WP_042659217.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042659217.1;transl_table=11 NC_005810.1 RefSeq gene 4075038 4076252 . - . ID=gene3732;Name=YP_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18710;old_locus_tag=YP3583%2CYP_3583 NC_005810.1 Protein Homology CDS 4075038 4076252 . - 0 ID=cds3635;Parent=gene3732;Dbxref=Genbank:WP_002209929.1;Name=WP_002209929.1;gbkey=CDS;product=integrase;protein_id=WP_002209929.1;transl_table=11 NC_005810.1 RefSeq gene 4076418 4076491 . - . ID=gene3733;Name=YP_RS18715;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS18715;old_locus_tag=tRNA-Gly_4%2CYP_t72 NC_005810.1 tRNAscan-SE tRNA 4076418 4076491 . - . ID=rna91;Parent=gene3733;anticodon=(pos:complement(4076457..4076459));gbkey=tRNA;product=tRNA-Gly NC_005810.1 tRNAscan-SE exon 4076418 4076491 . - . ID=id778;Parent=rna91;anticodon=(pos:complement(4076457..4076459));gbkey=tRNA;product=tRNA-Gly NC_005810.1 RefSeq gene 4076685 4078202 . - . ID=gene3734;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YP_RS18720;old_locus_tag=YP3584%2CYP_3584 NC_005810.1 Protein Homology CDS 4076685 4078202 . - 0 ID=cds3636;Parent=gene3734;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NC_005810.1 RefSeq gene 4078212 4079144 . - . ID=gene3735;Name=YP_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18725;old_locus_tag=YP3585%2CYP_3585 NC_005810.1 Protein Homology CDS 4078212 4079144 . - 0 ID=cds3637;Parent=gene3735;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11 NC_005810.1 RefSeq gene 4079489 4081222 . - . ID=gene3736;Name=YP_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18730;old_locus_tag=YP3586%2CYP_3586 NC_005810.1 Protein Homology CDS 4079489 4081222 . - 0 ID=cds3638;Parent=gene3736;Dbxref=Genbank:WP_002209931.1;Name=WP_002209931.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NC_005810.1 RefSeq gene 4081229 4081945 . - . ID=gene3737;Name=YP_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18735;old_locus_tag=YP3587%2CYP_3587 NC_005810.1 Protein Homology CDS 4081229 4081945 . - 0 ID=cds3639;Parent=gene3737;Dbxref=Genbank:WP_002209932.1;Name=WP_002209932.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_002209932.1;transl_table=11 NC_005810.1 RefSeq gene 4081976 4082875 . - . ID=gene3738;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YP_RS18740;old_locus_tag=YP3588%2CYP_3588 NC_005810.1 Protein Homology CDS 4081976 4082875 . - 0 ID=cds3640;Parent=gene3738;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NC_005810.1 RefSeq gene 4082982 4083500 . + . ID=gene3739;Name=YP_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18745;old_locus_tag=YP3589%2CYP_3589 NC_005810.1 Protein Homology CDS 4082982 4083500 . + 0 ID=cds3641;Parent=gene3739;Dbxref=Genbank:WP_002209934.1;Name=WP_002209934.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_002209934.1;transl_table=11 NC_005810.1 RefSeq gene 4083590 4085047 . - . ID=gene3740;Name=YP_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18750;old_locus_tag=YP3590%2CYP_3590 NC_005810.1 Protein Homology CDS 4083590 4085047 . - 0 ID=cds3642;Parent=gene3740;Dbxref=Genbank:WP_002220113.1;Name=WP_002220113.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220113.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4085043 4085084 . + . ID=id779;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4085168 4086586 . - . ID=gene3741;Name=YP_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18755;old_locus_tag=YP3591%2CYP_3591 NC_005810.1 Protein Homology CDS 4085168 4086586 . - 0 ID=cds3643;Parent=gene3741;Dbxref=Genbank:WP_002209936.1;Name=WP_002209936.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002209936.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4086596 4086623 . + . ID=id780;Note=exact repeat region containing 2 copies of a 14 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4086611 4087309 . - . ID=gene3742;Name=YP_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18760;old_locus_tag=YP3592%2CYP_3592 NC_005810.1 Protein Homology CDS 4086611 4087309 . - 0 ID=cds3644;Parent=gene3742;Dbxref=Genbank:WP_002209937.1;Name=WP_002209937.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209937.1;transl_table=11 NC_005810.1 RefSeq gene 4087309 4087734 . - . ID=gene3743;Name=YP_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18765;old_locus_tag=YP3593%2CYP_3593 NC_005810.1 Protein Homology CDS 4087309 4087734 . - 0 ID=cds3645;Parent=gene3743;Dbxref=Genbank:WP_002215144.1;Name=WP_002215144.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215144.1;transl_table=11 NC_005810.1 RefSeq gene 4087715 4087981 . - . ID=gene3744;Name=YP_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18770;old_locus_tag=YP3594%2CYP_3594 NC_005810.1 Protein Homology CDS 4087715 4087981 . - 0 ID=cds3646;Parent=gene3744;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11 NC_005810.1 RefSeq gene 4088298 4089290 . + . ID=gene3745;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YP_RS18775;old_locus_tag=YP3595%2CYP_3595 NC_005810.1 Protein Homology CDS 4088298 4089290 . + 0 ID=cds3647;Parent=gene3745;Dbxref=Genbank:WP_002209940.1;Name=WP_002209940.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_002209940.1;transl_table=11 NC_005810.1 RefSeq gene 4089363 4089860 . - . ID=gene3746;Name=YP_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18780;old_locus_tag=YP3596%2CYP_3596 NC_005810.1 Protein Homology CDS 4089363 4089860 . - 0 ID=cds3648;Parent=gene3746;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4090090 4090123 . + . ID=id781;Note=exact repeat region containing 2 copies of a 17 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4090118 4090819 . - . ID=gene3747;Name=YP_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18785;old_locus_tag=YP3597%2CYP_3597 NC_005810.1 Protein Homology CDS 4090118 4090819 . - 0 ID=cds3649;Parent=gene3747;Dbxref=Genbank:WP_002209942.1;Name=WP_002209942.1;gbkey=CDS;product=hemolysin III;protein_id=WP_002209942.1;transl_table=11 NC_005810.1 RefSeq gene 4091021 4092124 . - . ID=gene3748;Name=YP_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18790;old_locus_tag=YP3598%2CYP_3598 NC_005810.1 Protein Homology CDS 4091021 4092124 . - 0 ID=cds3650;Parent=gene3748;Dbxref=Genbank:WP_002209943.1;Name=WP_002209943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209943.1;transl_table=11 NC_005810.1 RefSeq gene 4092228 4094204 . - . ID=gene3749;Name=YP_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18795;old_locus_tag=YP3599 NC_005810.1 Protein Homology CDS 4092228 4094204 . - 0 ID=cds3651;Parent=gene3749;Dbxref=Genbank:WP_002215142.1;Name=WP_002215142.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215142.1;transl_table=11 NC_005810.1 RefSeq gene 4094201 4094353 . - . ID=gene3750;Name=YP_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18800;old_locus_tag=YP3600%2CYP_3600 NC_005810.1 Protein Homology CDS 4094201 4094353 . - 0 ID=cds3652;Parent=gene3750;Dbxref=Genbank:WP_002209944.1;Name=WP_002209944.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002209944.1;transl_table=11 NC_005810.1 RefSeq gene 4095414 4095851 . - . ID=gene3751;Name=YP_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18805;old_locus_tag=YP3601%2CYP_3601 NC_005810.1 Protein Homology CDS 4095414 4095851 . - 0 ID=cds3653;Parent=gene3751;Dbxref=Genbank:WP_002209946.1;Name=WP_002209946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209946.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4096022 4096195 . + . ID=id782;gbkey=repeat_region NC_005810.1 RefSeq gene 4096229 4099108 . - . ID=gene3752;Name=YP_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18810;old_locus_tag=YP3602%2CYP_3602 NC_005810.1 Protein Homology CDS 4096229 4099108 . - 0 ID=cds3654;Parent=gene3752;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11 NC_005810.1 RefSeq gene 4099320 4099706 . - . ID=gene3753;Name=YP_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18815;old_locus_tag=YP3603%2CYP_3603 NC_005810.1 Protein Homology CDS 4099320 4099706 . - 0 ID=cds3655;Parent=gene3753;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11 NC_005810.1 RefSeq gene 4099775 4100872 . - . ID=gene3754;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YP_RS18820;old_locus_tag=YP3604%2CYP_3604 NC_005810.1 Protein Homology CDS 4099775 4100872 . - 0 ID=cds3656;Parent=gene3754;Dbxref=Genbank:WP_002209949.1;Name=WP_002209949.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_002209949.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4101449 4101496 . + . ID=id783;Note=exact repeat region containing 2 copies of a 24 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4101593 4102813 . - . ID=gene3755;Name=YP_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18825;old_locus_tag=YP3605%2CYP_3605 NC_005810.1 Protein Homology CDS 4101593 4102813 . - 0 ID=cds3657;Parent=gene3755;Dbxref=Genbank:WP_002209950.1;Name=WP_002209950.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209950.1;transl_table=11 NC_005810.1 RefSeq gene 4102986 4104164 . - . ID=gene3756;Name=YP_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18830;old_locus_tag=YP3606%2CYP_3606 NC_005810.1 Protein Homology CDS 4102986 4104164 . - 0 ID=cds3658;Parent=gene3756;Dbxref=Genbank:WP_002209951.1;Name=WP_002209951.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209951.1;transl_table=11 NC_005810.1 RefSeq gene 4104250 4105563 . - . ID=gene3757;Name=YP_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18835;old_locus_tag=YP3607%2CYP_3607 NC_005810.1 Protein Homology CDS 4104250 4105563 . - 0 ID=cds3659;Parent=gene3757;Dbxref=Genbank:WP_002209952.1;Name=WP_002209952.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_002209952.1;transl_table=11 NC_005810.1 RefSeq gene 4105651 4106229 . - . ID=gene3758;Name=YP_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18840;old_locus_tag=YP3608%2CYP_3608 NC_005810.1 Protein Homology CDS 4105651 4106229 . - 0 ID=cds3660;Parent=gene3758;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11 NC_005810.1 RefSeq gene 4106566 4106895 . + . ID=gene3759;Name=YP_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18845;old_locus_tag=YP3609%2CYP_3609 NC_005810.1 Protein Homology CDS 4106566 4106895 . + 0 ID=cds3661;Parent=gene3759;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4106886 4106921 . + . ID=id784;Note=exact repeat region containing 2 copies of a 18 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4107259 4107855 . + . ID=gene3760;Name=YP_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18850;old_locus_tag=YP3610%2CYP_3610 NC_005810.1 Protein Homology CDS 4107259 4107855 . + 0 ID=cds3662;Parent=gene3760;Dbxref=Genbank:WP_002209955.1;Name=WP_002209955.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002209955.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4107906 4108078 . + . ID=id785;gbkey=repeat_region NC_005810.1 RefSeq gene 4108120 4109361 . - . ID=gene3761;Name=YP_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18855;old_locus_tag=YP3611%2CYP_3611 NC_005810.1 Protein Homology CDS 4108120 4109361 . - 0 ID=cds3663;Parent=gene3761;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NC_005810.1 RefSeq gene 4109668 4110324 . - . ID=gene3762;Name=YP_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18860;old_locus_tag=YP3612%2CYP_3612 NC_005810.1 Protein Homology CDS 4109668 4110324 . - 0 ID=cds3664;Parent=gene3762;Dbxref=Genbank:WP_002209957.1;Name=WP_002209957.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A 1;protein_id=WP_002209957.1;transl_table=11 NC_005810.1 RefSeq gene 4110666 4111574 . + . ID=gene3763;Name=YP_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18865;old_locus_tag=YP3613%2CYP_3613 NC_005810.1 Protein Homology CDS 4110666 4111574 . + 0 ID=cds3665;Parent=gene3763;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11 NC_005810.1 RefSeq gene 4111585 4112364 . - . ID=gene3764;Name=YP_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18870;old_locus_tag=YP3614%2CYP_3614 NC_005810.1 Protein Homology CDS 4111585 4112364 . - 0 ID=cds3666;Parent=gene3764;Dbxref=Genbank:WP_002209959.1;Name=WP_002209959.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209959.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4112711 4114874 . + . ID=id786;gbkey=repeat_region NC_005810.1 RefSeq region 4112713 4114665 . + . ID=id787;gbkey=mobile_element NC_005810.1 RefSeq gene 4112799 4113821 . + . ID=gene3765;Name=YP_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18875;old_locus_tag=YP3616%2CYP_3616 NC_005810.1 Protein Homology CDS 4112799 4113821 . + 0 ID=cds3667;Parent=gene3765;Dbxref=Genbank:WP_011171963.1;Name=WP_011171963.1;gbkey=CDS;product=transposase;protein_id=WP_011171963.1;transl_table=11 NC_005810.1 RefSeq gene 4113821 4114600 . + . ID=gene3766;Name=YP_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18880;old_locus_tag=YP3617%2CYP_3617 NC_005810.1 Protein Homology CDS 4113821 4114600 . + 0 ID=cds3668;Parent=gene3766;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq region 4114665 4114870 . - . ID=id788;Note=partial element disrupted by IS100;gbkey=mobile_element NC_005810.1 RefSeq gene 4114715 4114903 . - . ID=gene3767;Name=YP_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18885 NC_005810.1 Protein Homology CDS 4114715 4114903 . - 0 ID=cds3669;Parent=gene3767;Dbxref=Genbank:WP_012304583.1;Name=WP_012304583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304583.1;transl_table=11 NC_005810.1 RefSeq gene 4114940 4115326 . - . ID=gene3768;Name=YP_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18890;old_locus_tag=YP3619%2CYP_3619 NC_005810.1 Protein Homology CDS 4114940 4115326 . - 0 ID=cds3670;Parent=gene3768;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4115403 4115578 . + . ID=id789;gbkey=repeat_region NC_005810.1 RefSeq gene 4115621 4118335 . - . ID=gene3769;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=YP_RS18895;old_locus_tag=YP3620%2CYP_3620 NC_005810.1 Protein Homology CDS 4115621 4118335 . - 0 ID=cds3671;Parent=gene3769;Dbxref=Genbank:WP_002210426.1;Name=WP_002210426.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NC_005810.1 RefSeq gene 4118413 4118946 . - . ID=gene3770;Name=YP_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18900;old_locus_tag=YP3621%2CYP_3621 NC_005810.1 Protein Homology CDS 4118413 4118946 . - 0 ID=cds3672;Parent=gene3770;Dbxref=Genbank:WP_002210427.1;Name=WP_002210427.1;gbkey=CDS;product=secretion monitor;protein_id=WP_002210427.1;transl_table=11 NC_005810.1 RefSeq gene 4118975 4119499 . + . ID=gene3771;Name=YP_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18905;old_locus_tag=YP3622%2CYP_3622 NC_005810.1 Protein Homology CDS 4118975 4119499 . + 0 ID=cds3673;Parent=gene3771;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11 NC_005810.1 RefSeq gene 4119666 4120586 . - . ID=gene3772;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YP_RS18910;old_locus_tag=YP3623%2CYP_3623 NC_005810.1 Protein Homology CDS 4119666 4120586 . - 0 ID=cds3674;Parent=gene3772;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NC_005810.1 RefSeq gene 4120694 4121836 . - . ID=gene3773;Name=YP_RS18915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS18915;old_locus_tag=YP3624%2CYP_3624;partial=true;pseudo=true;start_range=.,4120694 NC_005810.1 Protein Homology CDS 4120694 4121836 . - 0 ID=cds3675;Parent=gene3773;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=cell division protein FtsZ;pseudo=true;start_range=.,4120694;transl_table=11 NC_005810.1 RefSeq gene 4121909 4123165 . - . ID=gene3774;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YP_RS18920;old_locus_tag=YP3625%2CYP_3625 NC_005810.1 Protein Homology CDS 4121909 4123165 . - 0 ID=cds3676;Parent=gene3774;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NC_005810.1 RefSeq gene 4123192 4124019 . - . ID=gene3775;Name=YP_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18925;old_locus_tag=YP3626%2CYP_3626 NC_005810.1 Protein Homology CDS 4123192 4124019 . - 0 ID=cds3677;Parent=gene3775;Dbxref=Genbank:WP_011171965.1;Name=WP_011171965.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_011171965.1;transl_table=11 NC_005810.1 RefSeq gene 4124021 4124941 . - . ID=gene3776;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=YP_RS18930;old_locus_tag=YP3627%2CYP_3627 NC_005810.1 Protein Homology CDS 4124021 4124941 . - 0 ID=cds3678;Parent=gene3776;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NC_005810.1 RefSeq gene 4124934 4126409 . - . ID=gene3777;Name=YP_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18935;old_locus_tag=YP3628%2CYP_3628 NC_005810.1 Protein Homology CDS 4124934 4126409 . - 0 ID=cds3679;Parent=gene3777;Dbxref=Genbank:WP_002216457.1;Name=WP_002216457.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11 NC_005810.1 RefSeq gene 4126547 4127617 . - . ID=gene3778;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YP_RS18940;old_locus_tag=YP3629%2CYP_3629 NC_005810.1 Protein Homology CDS 4126547 4127617 . - 0 ID=cds3680;Parent=gene3778;Dbxref=Genbank:WP_002210434.1;Name=WP_002210434.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_002210434.1;transl_table=11 NC_005810.1 RefSeq gene 4127614 4128816 . - . ID=gene3779;Name=YP_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18945;old_locus_tag=YP3630%2CYP_3630 NC_005810.1 Protein Homology CDS 4127614 4128816 . - 0 ID=cds3681;Parent=gene3779;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NC_005810.1 RefSeq gene 4128816 4130132 . - . ID=gene3780;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YP_RS18950;old_locus_tag=YP3631%2CYP_3631 NC_005810.1 Protein Homology CDS 4128816 4130132 . - 0 ID=cds3682;Parent=gene3780;Dbxref=Genbank:WP_002210436.1;Name=WP_002210436.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_002210436.1;transl_table=11 NC_005810.1 RefSeq gene 4130135 4131217 . - . ID=gene3781;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YP_RS18955;old_locus_tag=YP3632%2CYP_3632 NC_005810.1 Protein Homology CDS 4130135 4131217 . - 0 ID=cds3683;Parent=gene3781;Dbxref=Genbank:WP_002210437.1;Name=WP_002210437.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_002210437.1;transl_table=11 NC_005810.1 RefSeq gene 4131211 4132587 . - . ID=gene3782;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YP_RS18960;old_locus_tag=YP3633%2CYP_3633 NC_005810.1 Protein Homology CDS 4131211 4132587 . - 0 ID=cds3684;Parent=gene3782;Dbxref=Genbank:WP_002210438.1;Name=WP_002210438.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_002210438.1;transl_table=11 NC_005810.1 RefSeq gene 4132584 4134071 . - . ID=gene3783;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YP_RS18965;old_locus_tag=YP3634%2CYP_3634 NC_005810.1 Protein Homology CDS 4132584 4134071 . - 0 ID=cds3685;Parent=gene3783;Dbxref=Genbank:WP_002210439.1;Name=WP_002210439.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_002210439.1;transl_table=11 NC_005810.1 RefSeq gene 4134058 4135821 . - . ID=gene3784;Name=YP_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18970;old_locus_tag=YP3635%2CYP_3635 NC_005810.1 Protein Homology CDS 4134058 4135821 . - 0 ID=cds3686;Parent=gene3784;Dbxref=Genbank:WP_002210440.1;Name=WP_002210440.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=penicillin-binding protein 3;protein_id=WP_002210440.1;transl_table=11 NC_005810.1 RefSeq gene 4135887 4136204 . - . ID=gene3785;Name=YP_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18975;old_locus_tag=YP3636%2CYP_3636 NC_005810.1 Protein Homology CDS 4135887 4136204 . - 0 ID=cds3687;Parent=gene3785;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NC_005810.1 RefSeq gene 4136201 4137163 . - . ID=gene3786;Name=YP_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18980;old_locus_tag=YP3637%2CYP_3637 NC_005810.1 Protein Homology CDS 4136201 4137163 . - 0 ID=cds3688;Parent=gene3786;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11 NC_005810.1 RefSeq gene 4137166 4137624 . - . ID=gene3787;Name=YP_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18985;old_locus_tag=YP3638%2CYP_3638 NC_005810.1 Protein Homology CDS 4137166 4137624 . - 0 ID=cds3689;Parent=gene3787;Dbxref=Genbank:WP_002210443.1;Name=WP_002210443.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_002210443.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4138193 4138365 . + . ID=id790;gbkey=repeat_region NC_005810.1 RefSeq gene 4138726 4139166 . + . ID=gene3788;Name=YP_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18990;old_locus_tag=YP3639%2CYP_3639 NC_005810.1 Protein Homology CDS 4138726 4139166 . + 0 ID=cds3690;Parent=gene3788;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11 NC_005810.1 RefSeq gene 4139297 4140307 . - . ID=gene3789;Name=YP_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS18995;old_locus_tag=YP3640%2CYP_3640 NC_005810.1 Protein Homology CDS 4139297 4140307 . - 0 ID=cds3691;Parent=gene3789;Dbxref=Genbank:WP_002210447.1;Name=WP_002210447.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210447.1;transl_table=11 NC_005810.1 RefSeq gene 4140374 4140490 . + . ID=gene3790;Name=YP_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19000 NC_005810.1 Protein Homology CDS 4140374 4140490 . + 0 ID=cds3692;Parent=gene3790;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4140701 4141424 . + . ID=id791;gbkey=repeat_region NC_005810.1 RefSeq region 4140704 4141415 . - . ID=id792;gbkey=mobile_element NC_005810.1 RefSeq gene 4140812 4141270 . - . ID=gene3791;Name=YP_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19005;old_locus_tag=YP3641%2CYP_3641 NC_005810.1 Protein Homology CDS 4140812 4141270 . - 0 ID=cds3693;Parent=gene3791;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 4141260 4141430 . - . ID=gene3792;Name=YP_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19010 NC_005810.1 Protein Homology CDS 4141260 4141430 . - 0 ID=cds3694;Parent=gene3792;Dbxref=Genbank:WP_002216432.1;Name=WP_002216432.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216432.1;transl_table=11 NC_005810.1 RefSeq gene 4141699 4141914 . - . ID=gene3793;Name=YP_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19015;old_locus_tag=YP3642%2CYP_3642 NC_005810.1 Protein Homology CDS 4141699 4141914 . - 0 ID=cds3695;Parent=gene3793;Dbxref=Genbank:WP_002210452.1;Name=WP_002210452.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210452.1;transl_table=11 NC_005810.1 RefSeq gene 4142591 4143547 . + . ID=gene3794;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YP_RS19020;old_locus_tag=YP3643%2CYP_3643 NC_005810.1 Protein Homology CDS 4142591 4143547 . + 0 ID=cds3696;Parent=gene3794;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11 NC_005810.1 RefSeq gene 4143893 4144099 . + . ID=gene3795;Name=YP_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19025;old_locus_tag=YP3644%2CYP_3644 NC_005810.1 Protein Homology CDS 4143893 4144099 . + 0 ID=cds3697;Parent=gene3795;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11 NC_005810.1 RefSeq gene 4144096 4145901 . + . ID=gene3796;Name=YP_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19030;old_locus_tag=YP3645%2CYP_3645 NC_005810.1 Protein Homology CDS 4144096 4145901 . + 0 ID=cds3698;Parent=gene3796;Dbxref=Genbank:WP_002216437.1;Name=WP_002216437.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002216437.1;transl_table=11 NC_005810.1 RefSeq gene 4145932 4146042 . + . ID=gene3797;Name=YP_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19035 NC_005810.1 Protein Homology CDS 4145932 4146042 . + 0 ID=cds3699;Parent=gene3797;Dbxref=Genbank:WP_002228104.1;Name=WP_002228104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228104.1;transl_table=11 NC_005810.1 RefSeq gene 4146361 4148088 . + . ID=gene3798;Name=YP_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19040;old_locus_tag=YP3646%2CYP_3646 NC_005810.1 Protein Homology CDS 4146361 4148088 . + 0 ID=cds3700;Parent=gene3798;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11 NC_005810.1 RefSeq gene 4148091 4148585 . + . ID=gene3799;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YP_RS19045;old_locus_tag=YP3647%2CYP_3647 NC_005810.1 Protein Homology CDS 4148091 4148585 . + 0 ID=cds3701;Parent=gene3799;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4148633 4149355 . + . ID=id793;gbkey=repeat_region NC_005810.1 RefSeq region 4148639 4149350 . + . ID=id794;gbkey=mobile_element NC_005810.1 RefSeq gene 4148784 4149242 . + . ID=gene3800;Name=YP_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19050;old_locus_tag=YP3648%2CYP_3648 NC_005810.1 Protein Homology CDS 4148784 4149242 . + 0 ID=cds3702;Parent=gene3800;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 4149389 4150951 . + . ID=gene3801;Name=YP_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19055;old_locus_tag=YP3649%2CYP_3649 NC_005810.1 Protein Homology CDS 4149389 4150951 . + 0 ID=cds3703;Parent=gene3801;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NC_005810.1 RefSeq gene 4150954 4152045 . + . ID=gene3802;Name=YP_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19060;old_locus_tag=YP3650%2CYP_3650 NC_005810.1 Protein Homology CDS 4150954 4152045 . + 0 ID=cds3704;Parent=gene3802;Dbxref=Genbank:WP_002210454.1;Name=WP_002210454.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_002210454.1;transl_table=11 NC_005810.1 RefSeq gene 4152047 4153477 . + . ID=gene3803;Name=YP_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19065;old_locus_tag=YP3651%2CYP_3651 NC_005810.1 Protein Homology CDS 4152047 4153477 . + 0 ID=cds3705;Parent=gene3803;Dbxref=Genbank:WP_002210455.1;Name=WP_002210455.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11 NC_005810.1 RefSeq gene 4153492 4154094 . + . ID=gene3804;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YP_RS19070;old_locus_tag=YP3652%2CYP_3652 NC_005810.1 Protein Homology CDS 4153492 4154094 . + 0 ID=cds3706;Parent=gene3804;Dbxref=Genbank:WP_002210456.1;Name=WP_002210456.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NC_005810.1 RefSeq gene 4154335 4155516 . - . ID=gene3805;Name=YP_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19075;old_locus_tag=YP3653%2CYP_3653 NC_005810.1 Protein Homology CDS 4154335 4155516 . - 0 ID=cds3707;Parent=gene3805;Dbxref=Genbank:WP_002224086.1;Name=WP_002224086.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002224086.1;transl_table=11 NC_005810.1 RefSeq gene 4155769 4155942 . - . ID=gene3806;Name=YP_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19080;old_locus_tag=YP3654%2CYP_3654 NC_005810.1 Protein Homology CDS 4155769 4155942 . - 0 ID=cds3708;Parent=gene3806;Dbxref=Genbank:WP_002214268.1;Name=WP_002214268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214268.1;transl_table=11 NC_005810.1 RefSeq gene 4156180 4157841 . + . ID=gene3807;Name=YP_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19085;old_locus_tag=YP3655%2CYP_3655 NC_005810.1 Protein Homology CDS 4156180 4157841 . + 0 ID=cds3709;Parent=gene3807;Dbxref=Genbank:WP_002210461.1;Name=WP_002210461.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210461.1;transl_table=11 NC_005810.1 RefSeq gene 4157942 4158226 . - . ID=gene3808;Name=YP_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19090;old_locus_tag=YP3656%2CYP_3656 NC_005810.1 Protein Homology CDS 4157942 4158226 . - 0 ID=cds3710;Parent=gene3808;Dbxref=Genbank:WP_002214269.1;Name=WP_002214269.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214269.1;transl_table=11 NC_005810.1 RefSeq gene 4158727 4159773 . + . ID=gene3809;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=YP_RS19095;old_locus_tag=YP3657%2CYP_3657 NC_005810.1 Protein Homology CDS 4158727 4159773 . + 0 ID=cds3711;Parent=gene3809;Dbxref=Genbank:WP_002210462.1;Name=WP_002210462.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_002210462.1;transl_table=11 NC_005810.1 RefSeq gene 4159749 4161356 . + . ID=gene3810;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YP_RS19100;old_locus_tag=YP3658%2CYP_3658 NC_005810.1 Protein Homology CDS 4159749 4161356 . + 0 ID=cds3712;Parent=gene3810;Dbxref=Genbank:WP_002214276.1;Name=WP_002214276.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_002214276.1;transl_table=11 NC_005810.1 RefSeq gene 4161343 4162053 . + . ID=gene3811;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YP_RS19105;old_locus_tag=YP3659%2CYP_3659 NC_005810.1 Protein Homology CDS 4161343 4162053 . + 0 ID=cds3713;Parent=gene3811;Dbxref=Genbank:WP_002210464.1;Name=WP_002210464.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_002210464.1;transl_table=11 NC_005810.1 RefSeq gene 4162122 4162889 . - . ID=gene3812;Name=YP_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19110;old_locus_tag=YP3660%2CYP_3660 NC_005810.1 Protein Homology CDS 4162122 4162889 . - 0 ID=cds3714;Parent=gene3812;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11 NC_005810.1 RefSeq gene 4163085 4165454 . + . ID=gene3813;Name=YP_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19115;old_locus_tag=YP3661%2CYP_3661 NC_005810.1 Protein Homology CDS 4163085 4165454 . + 0 ID=cds3715;Parent=gene3813;Dbxref=Genbank:WP_002210466.1;Name=WP_002210466.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4165780 4165811 . + . ID=id795;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4165915 4168821 . + . ID=gene3814;Name=YP_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19120;old_locus_tag=YP3662%2CYP_3662 NC_005810.1 Protein Homology CDS 4165915 4168821 . + 0 ID=cds3716;Parent=gene3814;Dbxref=Genbank:WP_002220588.1;Name=WP_002220588.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_002220588.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4168864 4169034 . + . ID=id796;gbkey=repeat_region NC_005810.1 RefSeq gene 4169077 4169430 . - . ID=gene3815;Name=YP_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19125;old_locus_tag=YP3663%2CYP_3663 NC_005810.1 Protein Homology CDS 4169077 4169430 . - 0 ID=cds3717;Parent=gene3815;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11 NC_005810.1 RefSeq gene 4169452 4172946 . - . ID=gene3816;Name=YP_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19130;old_locus_tag=YP3664%2CYP_3664 NC_005810.1 Protein Homology CDS 4169452 4172946 . - 0 ID=cds3718;Parent=gene3816;Dbxref=Genbank:WP_002228281.1;Name=WP_002228281.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228281.1;transl_table=11 NC_005810.1 RefSeq gene 4172955 4174565 . - . ID=gene3817;Name=YP_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19135;old_locus_tag=YP3665%2CYP_3665 NC_005810.1 Protein Homology CDS 4172955 4174565 . - 0 ID=cds3719;Parent=gene3817;Dbxref=Genbank:WP_002210469.1;Name=WP_002210469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210469.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4174224 4174286 . + . ID=id797;Note=degenerate repeat region containing 3 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4174562 4175917 . - . ID=gene3818;Name=YP_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19140;old_locus_tag=YP3666%2CYP_3666 NC_005810.1 Protein Homology CDS 4174562 4175917 . - 0 ID=cds3720;Parent=gene3818;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11 NC_005810.1 RefSeq gene 4176019 4176510 . - . ID=gene3819;Name=YP_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19145;old_locus_tag=YP3667%2CYP_3667 NC_005810.1 Protein Homology CDS 4176019 4176510 . - 0 ID=cds3721;Parent=gene3819;Dbxref=Genbank:WP_002210471.1;Name=WP_002210471.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210471.1;transl_table=11 NC_005810.1 RefSeq gene 4176503 4176868 . - . ID=gene3820;Name=YP_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19150;old_locus_tag=YP3668%2CYP_3668 NC_005810.1 Protein Homology CDS 4176503 4176868 . - 0 ID=cds3722;Parent=gene3820;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11 NC_005810.1 RefSeq gene 4176874 4177491 . - . ID=gene3821;Name=YP_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19155;old_locus_tag=YP3669%2CYP_3669 NC_005810.1 Protein Homology CDS 4176874 4177491 . - 0 ID=cds3723;Parent=gene3821;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11 NC_005810.1 RefSeq gene 4177484 4178587 . - . ID=gene3822;Name=YP_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19160;old_locus_tag=YP3670%2CYP_3670 NC_005810.1 Protein Homology CDS 4177484 4178587 . - 0 ID=cds3724;Parent=gene3822;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11 NC_005810.1 RefSeq gene 4178613 4180832 . - . ID=gene3823;Name=YP_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19165;old_locus_tag=YP3671%2CYP_3671 NC_005810.1 Protein Homology CDS 4178613 4180832 . - 0 ID=cds3725;Parent=gene3823;Dbxref=Genbank:WP_002224087.1;Name=WP_002224087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224087.1;transl_table=11 NC_005810.1 RefSeq gene 4180845 4183193 . - . ID=gene3824;Name=YP_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19170;old_locus_tag=YP3672%2CYP_3672 NC_005810.1 Protein Homology CDS 4180845 4183193 . - 0 ID=cds3726;Parent=gene3824;Dbxref=Genbank:WP_002210474.1;Name=WP_002210474.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210474.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4181282 4181323 . + . ID=id798;Note=degenerate repeat region containing 2 copies of a 21bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4183297 4185885 . - . ID=gene3825;Name=YP_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19175;old_locus_tag=YP3673%2CYP_3673 NC_005810.1 Protein Homology CDS 4183297 4185885 . - 0 ID=cds3727;Parent=gene3825;Dbxref=Genbank:WP_002210475.1;Name=WP_002210475.1;gbkey=CDS;product=peptidase;protein_id=WP_002210475.1;transl_table=11 NC_005810.1 RefSeq gene 4185903 4186886 . - . ID=gene3826;Name=YP_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19180;old_locus_tag=YP3674%2CYP_3674 NC_005810.1 Protein Homology CDS 4185903 4186886 . - 0 ID=cds3728;Parent=gene3826;Dbxref=Genbank:WP_002210476.1;Name=WP_002210476.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210476.1;transl_table=11 NC_005810.1 RefSeq gene 4186879 4188723 . - . ID=gene3827;Name=YP_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19185;old_locus_tag=YP3675%2CYP_3675 NC_005810.1 Protein Homology CDS 4186879 4188723 . - 0 ID=cds3729;Parent=gene3827;Dbxref=Genbank:WP_002210477.1;Name=WP_002210477.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_002210477.1;transl_table=11 NC_005810.1 RefSeq gene 4188756 4189199 . - . ID=gene3828;Name=YP_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19190;old_locus_tag=YP3676%2CYP_3676 NC_005810.1 Protein Homology CDS 4188756 4189199 . - 0 ID=cds3730;Parent=gene3828;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11 NC_005810.1 RefSeq gene 4189273 4189791 . - . ID=gene3829;Name=YP_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19195;old_locus_tag=YP3677%2CYP_3677 NC_005810.1 Protein Homology CDS 4189273 4189791 . - 0 ID=cds3731;Parent=gene3829;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11 NC_005810.1 RefSeq gene 4189954 4191456 . - . ID=gene3830;Name=YP_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19200;old_locus_tag=YP3678%2CYP_3678 NC_005810.1 Protein Homology CDS 4189954 4191456 . - 0 ID=cds3732;Parent=gene3830;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11 NC_005810.1 RefSeq gene 4191465 4192025 . - . ID=gene3831;Name=YP_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19205;old_locus_tag=YP3679%2CYP_3679 NC_005810.1 Protein Homology CDS 4191465 4192025 . - 0 ID=cds3733;Parent=gene3831;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11 NC_005810.1 RefSeq gene 4192036 4193049 . - . ID=gene3832;Name=YP_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19210;old_locus_tag=YP3680%2CYP_3680 NC_005810.1 Protein Homology CDS 4192036 4193049 . - 0 ID=cds3734;Parent=gene3832;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11 NC_005810.1 RefSeq gene 4193379 4194122 . + . ID=gene3833;Name=YP_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19215;old_locus_tag=YP3681%2CYP_3681 NC_005810.1 Protein Homology CDS 4193379 4194122 . + 0 ID=cds3735;Parent=gene3833;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11 NC_005810.1 RefSeq gene 4195345 4195965 . + . ID=gene3834;Name=YP_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19220;old_locus_tag=YP3682%2CYP_3682 NC_005810.1 Protein Homology CDS 4195345 4195965 . + 0 ID=cds3736;Parent=gene3834;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11 NC_005810.1 RefSeq gene 4196263 4197096 . - . ID=gene3835;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YP_RS19225;old_locus_tag=YP3683%2CYP_3683 NC_005810.1 Protein Homology CDS 4196263 4197096 . - 0 ID=cds3737;Parent=gene3835;Dbxref=Genbank:WP_002210486.1;Name=WP_002210486.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_002210486.1;transl_table=11 NC_005810.1 RefSeq gene 4197281 4199623 . + . ID=gene3836;Name=YP_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19230;old_locus_tag=YP3684%2CYP_3684 NC_005810.1 Protein Homology CDS 4197281 4199623 . + 0 ID=cds3738;Parent=gene3836;Dbxref=Genbank:WP_002228111.1;Name=WP_002228111.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_002228111.1;transl_table=11 NC_005810.1 RefSeq gene 4199691 4200995 . + . ID=gene3837;Name=YP_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19235;old_locus_tag=YP3685%2CYP_3685 NC_005810.1 Protein Homology CDS 4199691 4200995 . + 0 ID=cds3739;Parent=gene3837;Dbxref=Genbank:WP_002210488.1;Name=WP_002210488.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_002210488.1;transl_table=11 NC_005810.1 RefSeq gene 4200979 4201974 . + . ID=gene3838;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YP_RS19240;old_locus_tag=YP3686%2CYP_3686 NC_005810.1 Protein Homology CDS 4200979 4201974 . + 0 ID=cds3740;Parent=gene3838;Dbxref=Genbank:WP_002210489.1;Name=WP_002210489.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_002210489.1;transl_table=11 NC_005810.1 RefSeq gene 4201967 4202785 . + . ID=gene3839;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=YP_RS19245;old_locus_tag=YP3687%2CYP_3687 NC_005810.1 Protein Homology CDS 4201967 4202785 . + 0 ID=cds3741;Parent=gene3839;Dbxref=Genbank:WP_002210490.1;Name=WP_002210490.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_002210490.1;transl_table=11 NC_005810.1 RefSeq gene 4202799 4203176 . + . ID=gene3840;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=YP_RS19250;old_locus_tag=YP3688%2CYP_3688 NC_005810.1 Protein Homology CDS 4202799 4203176 . + 0 ID=cds3742;Parent=gene3840;Dbxref=Genbank:WP_002210491.1;Name=WP_002210491.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_002210491.1;transl_table=11 NC_005810.1 RefSeq gene 4203193 4204062 . + . ID=gene3841;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YP_RS19255;old_locus_tag=YP3689%2CYP_3689 NC_005810.1 Protein Homology CDS 4203193 4204062 . + 0 ID=cds3743;Parent=gene3841;Dbxref=Genbank:WP_002210492.1;Name=WP_002210492.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_002210492.1;transl_table=11 NC_005810.1 RefSeq gene 4204152 4204616 . - . ID=gene3842;Name=YP_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19260;old_locus_tag=YP3690%2CYP_3690 NC_005810.1 Protein Homology CDS 4204152 4204616 . - 0 ID=cds3744;Parent=gene3842;Dbxref=Genbank:WP_002210493.1;Name=WP_002210493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210493.1;transl_table=11 NC_005810.1 RefSeq gene 4204743 4204964 . - . ID=gene3843;Name=YP_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19265;old_locus_tag=YP3691%2CYP_3691 NC_005810.1 Protein Homology CDS 4204743 4204964 . - 0 ID=cds3745;Parent=gene3843;Dbxref=Genbank:WP_002210494.1;Name=WP_002210494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210494.1;transl_table=11 NC_005810.1 RefSeq gene 4205231 4205431 . + . ID=gene3844;Name=YP_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19270;old_locus_tag=YP3692%2CYP_3692 NC_005810.1 Protein Homology CDS 4205231 4205431 . + 0 ID=cds3746;Parent=gene3844;Dbxref=Genbank:WP_002230529.1;Name=WP_002230529.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230529.1;transl_table=11 NC_005810.1 RefSeq gene 4205458 4205940 . - . ID=gene3845;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YP_RS19275;old_locus_tag=YP3693%2CYP_3693 NC_005810.1 Protein Homology CDS 4205458 4205940 . - 0 ID=cds3747;Parent=gene3845;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NC_005810.1 RefSeq gene 4206090 4206545 . - . ID=gene3846;Name=YP_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19280;old_locus_tag=YP3694%2CYP_3694 NC_005810.1 Protein Homology CDS 4206090 4206545 . - 0 ID=cds3748;Parent=gene3846;Dbxref=Genbank:WP_002210498.1;Name=WP_002210498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210498.1;transl_table=11 NC_005810.1 RefSeq gene 4206542 4207342 . - . ID=gene3847;Name=YP_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19285;old_locus_tag=YP3695%2CYP_3695 NC_005810.1 Protein Homology CDS 4206542 4207342 . - 0 ID=cds3749;Parent=gene3847;Dbxref=Genbank:WP_002210499.1;Name=WP_002210499.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210499.1;transl_table=11 NC_005810.1 RefSeq gene 4207666 4208280 . + . ID=gene3848;Name=YP_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19290;old_locus_tag=YP3696%2CYP_3696 NC_005810.1 Protein Homology CDS 4207666 4208280 . + 0 ID=cds3750;Parent=gene3848;Dbxref=Genbank:WP_002210501.1;Name=WP_002210501.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_002210501.1;transl_table=11 NC_005810.1 RefSeq gene 4208508 4211741 . - . ID=gene3849;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YP_RS19295;old_locus_tag=YP3697%2CYP_3697 NC_005810.1 Protein Homology CDS 4208508 4211741 . - 0 ID=cds3751;Parent=gene3849;Dbxref=Genbank:WP_002210502.1;Name=WP_002210502.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large chain;protein_id=WP_002210502.1;transl_table=11 NC_005810.1 RefSeq gene 4211757 4212932 . - . ID=gene3850;Name=YP_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19300;old_locus_tag=YP3698%2CYP_3698 NC_005810.1 Protein Homology CDS 4211757 4212932 . - 0 ID=cds3752;Parent=gene3850;Dbxref=Genbank:WP_002224759.1;Name=WP_002224759.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_002224759.1;transl_table=11 NC_005810.1 RefSeq gene 4213405 4214226 . - . ID=gene3851;Name=YP_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19305;old_locus_tag=YP3699%2CYP_3699 NC_005810.1 Protein Homology CDS 4213405 4214226 . - 0 ID=cds3753;Parent=gene3851;Dbxref=Genbank:WP_002210504.1;Name=WP_002210504.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4214569 4215290 . + . ID=id799;gbkey=repeat_region NC_005810.1 RefSeq region 4214571 4215282 . - . ID=id800;gbkey=mobile_element NC_005810.1 RefSeq gene 4214679 4215137 . - . ID=gene3852;Name=YP_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19310;old_locus_tag=YP3700%2CYP_3700 NC_005810.1 Protein Homology CDS 4214679 4215137 . - 0 ID=cds3754;Parent=gene3852;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 4215127 4215297 . - . ID=gene3853;Name=YP_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19315 NC_005810.1 Protein Homology CDS 4215127 4215297 . - 0 ID=cds3755;Parent=gene3853;Dbxref=Genbank:WP_002216778.1;Name=WP_002216778.1;gbkey=CDS;product=invasin;protein_id=WP_002216778.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4215306 4215443 . + . ID=id801;gbkey=repeat_region NC_005810.1 RefSeq gene 4215326 4215451 . - . ID=gene3854;Name=YP_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19320;old_locus_tag=YP3701 NC_005810.1 Protein Homology CDS 4215326 4215451 . - 0 ID=cds3756;Parent=gene3854;Dbxref=Genbank:WP_002210505.1;Name=WP_002210505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210505.1;transl_table=11 NC_005810.1 RefSeq gene 4215519 4216472 . - . ID=gene3855;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YP_RS19325;old_locus_tag=YP3702%2CYP_3702 NC_005810.1 Protein Homology CDS 4215519 4216472 . - 0 ID=cds3757;Parent=gene3855;Dbxref=Genbank:WP_002210506.1;Name=WP_002210506.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002210506.1;transl_table=11 NC_005810.1 RefSeq gene 4216453 4216911 . - . ID=gene3856;Name=YP_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19330;old_locus_tag=YP3703%2CYP_3703 NC_005810.1 Protein Homology CDS 4216453 4216911 . - 0 ID=cds3758;Parent=gene3856;Dbxref=Genbank:WP_002228112.1;Name=WP_002228112.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NC_005810.1 RefSeq gene 4216979 4217488 . - . ID=gene3857;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YP_RS19335;old_locus_tag=YP3704%2CYP_3704 NC_005810.1 Protein Homology CDS 4216979 4217488 . - 0 ID=cds3759;Parent=gene3857;Dbxref=Genbank:WP_002210508.1;Name=WP_002210508.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_002210508.1;transl_table=11 NC_005810.1 RefSeq gene 4217488 4220304 . - . ID=gene3858;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YP_RS19340;old_locus_tag=YP3705%2CYP_3705 NC_005810.1 Protein Homology CDS 4217488 4220304 . - 0 ID=cds3760;Parent=gene3858;Dbxref=Genbank:WP_002210509.1;Name=WP_002210509.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_002210509.1;transl_table=11 NC_005810.1 RefSeq gene 4220336 4221274 . - . ID=gene3859;Name=YP_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19345;old_locus_tag=YP3706%2CYP_3706 NC_005810.1 Protein Homology CDS 4220336 4221274 . - 0 ID=cds3761;Parent=gene3859;Dbxref=Genbank:WP_002210510.1;Name=WP_002210510.1;gbkey=CDS;product=riboflavin biosynthesis protein RibF;protein_id=WP_002210510.1;transl_table=11 NC_005810.1 RefSeq gene 4221491 4221667 . + . ID=gene3860;Name=YP_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19350;old_locus_tag=YP3707%2CYP_3707 NC_005810.1 Protein Homology CDS 4221491 4221667 . + 0 ID=cds3762;Parent=gene3860;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11 NC_005810.1 RefSeq gene 4221689 4221952 . + . ID=gene3861;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YP_RS19355;old_locus_tag=YP3708%2CYP_3708 NC_005810.1 Protein Homology CDS 4221689 4221952 . + 0 ID=cds3763;Parent=gene3861;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NC_005810.1 RefSeq gene 4222083 4222982 . - . ID=gene3862;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YP_RS19360;old_locus_tag=YP3709%2CYP_3709 NC_005810.1 Protein Homology CDS 4222083 4222982 . - 0 ID=cds3764;Parent=gene3862;Dbxref=Genbank:WP_002220713.1;Name=WP_002220713.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_002220713.1;transl_table=11 NC_005810.1 RefSeq gene 4223112 4224296 . - . ID=gene3863;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=YP_RS19365;old_locus_tag=YP3710%2CYP_3710 NC_005810.1 Protein Homology CDS 4223112 4224296 . - 0 ID=cds3765;Parent=gene3863;Dbxref=Genbank:WP_002220711.1;Name=WP_002220711.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_002220711.1;transl_table=11 NC_005810.1 RefSeq gene 4224539 4225678 . - . ID=gene3864;Name=YP_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19370;old_locus_tag=YP3711%2CYP_3711 NC_005810.1 Protein Homology CDS 4224539 4225678 . - 0 ID=cds3766;Parent=gene3864;Dbxref=Genbank:WP_002209249.1;Name=WP_002209249.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NC_005810.1 RefSeq gene 4225790 4227700 . - . ID=gene3865;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YP_RS19375;old_locus_tag=YP3712%2CYP_3712 NC_005810.1 Protein Homology CDS 4225790 4227700 . - 0 ID=cds3767;Parent=gene3865;Dbxref=Genbank:WP_002209248.1;Name=WP_002209248.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11 NC_005810.1 RefSeq gene 4228074 4228684 . + . ID=gene3866;Name=YP_RS19380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS19380;old_locus_tag=YP3713%2CYP_3713;pseudo=true NC_005810.1 Protein Homology CDS 4228074 4228684 . + 0 ID=cds3768;Parent=gene3866;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq repeat_region 4228616 4228651 . + . ID=id802;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4228973 4231420 . + . ID=gene3867;Name=YP_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19385;old_locus_tag=YP3714%2CYP_3714 NC_005810.1 Protein Homology CDS 4228973 4231420 . + 0 ID=cds3769;Parent=gene3867;Dbxref=Genbank:WP_002209245.1;Name=WP_002209245.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_002209245.1;transl_table=11 NC_005810.1 RefSeq gene 4231490 4232878 . - . ID=gene3868;Name=YP_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19390;old_locus_tag=YP3715%2CYP_3715 NC_005810.1 Protein Homology CDS 4231490 4232878 . - 0 ID=cds3770;Parent=gene3868;Dbxref=Genbank:WP_002209244.1;Name=WP_002209244.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209244.1;transl_table=11 NC_005810.1 RefSeq gene 4233006 4233593 . - . ID=gene3869;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=YP_RS19395;old_locus_tag=YP3716%2CYP_3716 NC_005810.1 Protein Homology CDS 4233006 4233593 . - 0 ID=cds3771;Parent=gene3869;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11 NC_005810.1 RefSeq gene 4233881 4234834 . - . ID=gene3870;Name=YP_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19400;old_locus_tag=YP3718%2CYP_3718 NC_005810.1 Protein Homology CDS 4233881 4234834 . - 0 ID=cds3772;Parent=gene3870;Dbxref=Genbank:WP_002209241.1;Name=WP_002209241.1;gbkey=CDS;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NC_005810.1 RefSeq gene 4235366 4236142 . + . ID=gene3871;Name=YP_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19405;old_locus_tag=YP3720%2CYP_3720 NC_005810.1 Protein Homology CDS 4235366 4236142 . + 0 ID=cds3773;Parent=gene3871;Dbxref=Genbank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209240.1;transl_table=11 NC_005810.1 RefSeq gene 4236959 4238248 . - . ID=gene3872;Name=YP_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19410;old_locus_tag=YP3721%2CYP_3721 NC_005810.1 Protein Homology CDS 4236959 4238248 . - 0 ID=cds3774;Parent=gene3872;Dbxref=Genbank:WP_002209239.1;Name=WP_002209239.1;gbkey=CDS;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NC_005810.1 RefSeq gene 4238252 4239181 . - . ID=gene3873;Name=YP_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19415;old_locus_tag=YP3722%2CYP_3722 NC_005810.1 Protein Homology CDS 4238252 4239181 . - 0 ID=cds3775;Parent=gene3873;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NC_005810.1 RefSeq gene 4239184 4241643 . - . ID=gene3874;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=YP_RS19420;old_locus_tag=YP3723%2CYP_3723 NC_005810.1 Protein Homology CDS 4239184 4241643 . - 0 ID=cds3776;Parent=gene3874;Dbxref=Genbank:WP_002209237.1;Name=WP_002209237.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=WP_002209237.1;transl_table=11 NC_005810.1 RefSeq gene 4242747 4243463 . + . ID=gene3875;Name=YP_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19425;old_locus_tag=YP3725%2CYP_3725 NC_005810.1 Protein Homology CDS 4242747 4243463 . + 0 ID=cds3777;Parent=gene3875;Dbxref=Genbank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209234.1;transl_table=11 NC_005810.1 RefSeq gene 4243637 4244104 . - . ID=gene3876;Name=YP_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19430;old_locus_tag=YP3726%2CYP_3726 NC_005810.1 Protein Homology CDS 4243637 4244104 . - 0 ID=cds3778;Parent=gene3876;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11 NC_005810.1 RefSeq gene 4244330 4245196 . + . ID=gene3877;Name=YP_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19435;old_locus_tag=YP3727%2CYP_3727 NC_005810.1 Protein Homology CDS 4244330 4245196 . + 0 ID=cds3779;Parent=gene3877;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11 NC_005810.1 RefSeq gene 4245193 4245840 . - . ID=gene3878;Name=YP_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19440;old_locus_tag=YP3728%2CYP_3728 NC_005810.1 Protein Homology CDS 4245193 4245840 . - 0 ID=cds3780;Parent=gene3878;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NC_005810.1 RefSeq gene 4245934 4246476 . + . ID=gene3879;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YP_RS19445;old_locus_tag=YP3729%2CYP_3729 NC_005810.1 Protein Homology CDS 4245934 4246476 . + 0 ID=cds3781;Parent=gene3879;Dbxref=Genbank:WP_002209229.1;Name=WP_002209229.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_002209229.1;transl_table=11 NC_005810.1 RefSeq gene 4246473 4246865 . - . ID=gene3880;Name=YP_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19450;old_locus_tag=YP3730%2CYP_3730 NC_005810.1 Protein Homology CDS 4246473 4246865 . - 0 ID=cds3782;Parent=gene3880;Dbxref=Genbank:WP_002209228.1;Name=WP_002209228.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4247062 4247118 . + . ID=id803;Note=degenerate repeat region containing 3 copies of a 19bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4247120 4249039 . - . ID=gene3881;Name=YP_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19455;old_locus_tag=YP3731%2CYP_3731 NC_005810.1 Protein Homology CDS 4247120 4249039 . - 0 ID=cds3783;Parent=gene3881;Dbxref=Genbank:WP_002209227.1;Name=WP_002209227.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002209227.1;transl_table=11 NC_005810.1 RefSeq gene 4249609 4252335 . + . ID=gene3882;Name=YP_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19460;old_locus_tag=YP3732%2CYP_3732 NC_005810.1 Protein Homology CDS 4249609 4252335 . + 0 ID=cds3784;Parent=gene3882;Dbxref=Genbank:WP_002209226.1;Name=WP_002209226.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_002209226.1;transl_table=11 NC_005810.1 RefSeq gene 4252710 4253333 . + . ID=gene3883;Name=YP_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19465;old_locus_tag=YP3733%2CYP_3733 NC_005810.1 Protein Homology CDS 4252710 4253333 . + 0 ID=cds3785;Parent=gene3883;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11 NC_005810.1 RefSeq gene 4253330 4254631 . + . ID=gene3884;Name=YP_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19470;old_locus_tag=YP3734%2CYP_3734 NC_005810.1 Protein Homology CDS 4253330 4254631 . + 0 ID=cds3786;Parent=gene3884;Dbxref=Genbank:WP_002209224.1;Name=WP_002209224.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209224.1;transl_table=11 NC_005810.1 RefSeq gene 4254637 4255143 . + . ID=gene3885;Name=YP_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19475;old_locus_tag=YP3735%2CYP_3735 NC_005810.1 Protein Homology CDS 4254637 4255143 . + 0 ID=cds3787;Parent=gene3885;Dbxref=Genbank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215967.1;transl_table=11 NC_005810.1 RefSeq gene 4255326 4256993 . + . ID=gene3886;Name=YP_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19480;old_locus_tag=YP3736%2CYP_3736 NC_005810.1 Protein Homology CDS 4255326 4256993 . + 0 ID=cds3788;Parent=gene3886;Dbxref=Genbank:WP_002230536.1;Name=WP_002230536.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_002230536.1;transl_table=11 NC_005810.1 RefSeq gene 4257139 4258269 . - . ID=gene3887;Name=YP_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19485;old_locus_tag=YP3737%2CYP_3737 NC_005810.1 Protein Homology CDS 4257139 4258269 . - 0 ID=cds3789;Parent=gene3887;Dbxref=Genbank:WP_002218755.1;Name=WP_002218755.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_002218755.1;transl_table=11 NC_005810.1 RefSeq gene 4258426 4259697 . - . ID=gene3888;Name=YP_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19490;old_locus_tag=YP3738%2CYP_3738 NC_005810.1 Protein Homology CDS 4258426 4259697 . - 0 ID=cds3790;Parent=gene3888;Dbxref=Genbank:WP_002209221.1;Name=WP_002209221.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_002209221.1;transl_table=11 NC_005810.1 RefSeq gene 4259856 4261238 . - . ID=gene3889;Name=YP_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19495;old_locus_tag=YP3739%2CYP_3739 NC_005810.1 Protein Homology CDS 4259856 4261238 . - 0 ID=cds3791;Parent=gene3889;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NC_005810.1 RefSeq gene 4261326 4262306 . - . ID=gene3890;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YP_RS19500;old_locus_tag=YP3740%2CYP_3740 NC_005810.1 Protein Homology CDS 4261326 4262306 . - 0 ID=cds3792;Parent=gene3890;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4262360 4262393 . + . ID=id804;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4262538 4263239 . + . ID=gene3891;Name=YP_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19505;old_locus_tag=YP3741%2CYP_3741 NC_005810.1 Protein Homology CDS 4262538 4263239 . + 0 ID=cds3793;Parent=gene3891;Dbxref=Genbank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;product=protein Smp;protein_id=WP_002209218.1;transl_table=11 NC_005810.1 RefSeq gene 4263351 4264070 . - . ID=gene3892;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YP_RS19510;old_locus_tag=YP3742%2CYP_3742 NC_005810.1 Protein Homology CDS 4263351 4264070 . - 0 ID=cds3794;Parent=gene3892;Dbxref=Genbank:WP_002209217.1;Name=WP_002209217.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_002209217.1;transl_table=11 NC_005810.1 RefSeq gene 4264195 4265418 . - . ID=gene3893;Name=YP_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19515;old_locus_tag=YP3743%2CYP_3743 NC_005810.1 Protein Homology CDS 4264195 4265418 . - 0 ID=cds3795;Parent=gene3893;Dbxref=Genbank:WP_002209216.1;Name=WP_002209216.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_002209216.1;transl_table=11 NC_005810.1 RefSeq gene 4265550 4266896 . - . ID=gene3894;Name=YP_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19520;old_locus_tag=YP3744%2CYP_3744 NC_005810.1 Protein Homology CDS 4265550 4266896 . - 0 ID=cds3796;Parent=gene3894;Dbxref=Genbank:WP_041175933.1;Name=WP_041175933.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_041175933.1;transl_table=11 NC_005810.1 RefSeq gene 4266993 4267790 . - . ID=gene3895;Name=YP_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19525;old_locus_tag=YP3745%2CYP_3745 NC_005810.1 Protein Homology CDS 4266993 4267790 . - 0 ID=cds3797;Parent=gene3895;Dbxref=Genbank:WP_002216078.1;Name=WP_002216078.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase 2;protein_id=WP_002216078.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4268113 4268144 . + . ID=id805;Note=degenerate;gbkey=repeat_region NC_005810.1 RefSeq gene 4268366 4269643 . - . ID=gene3896;Name=YP_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19530;old_locus_tag=YP3746%2CYP_3746 NC_005810.1 Protein Homology CDS 4268366 4269643 . - 0 ID=cds3798;Parent=gene3896;Dbxref=Genbank:WP_032465614.1;Name=WP_032465614.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_032465614.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4269809 4269980 . + . ID=id806;gbkey=repeat_region NC_005810.1 RefSeq gene 4270172 4270960 . - . ID=gene3897;Name=YP_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19535;old_locus_tag=YP3747%2CYP_3747 NC_005810.1 Protein Homology CDS 4270172 4270960 . - 0 ID=cds3799;Parent=gene3897;Dbxref=Genbank:WP_002228116.1;Name=WP_002228116.1;gbkey=CDS;product=DNAse;protein_id=WP_002228116.1;transl_table=11 NC_005810.1 RefSeq gene 4270997 4272265 . - . ID=gene3898;Name=YP_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19540;old_locus_tag=YP3748%2CYP_3748 NC_005810.1 Protein Homology CDS 4270997 4272265 . - 0 ID=cds3800;Parent=gene3898;Dbxref=Genbank:WP_002209212.1;Name=WP_002209212.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002209212.1;transl_table=11 NC_005810.1 RefSeq gene 4272342 4272503 . - . ID=gene3899;Name=YP_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19545;old_locus_tag=YP3749%2CYP_3749 NC_005810.1 Protein Homology CDS 4272342 4272503 . - 0 ID=cds3801;Parent=gene3899;Dbxref=Genbank:WP_002209211.1;Name=WP_002209211.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209211.1;transl_table=11 NC_005810.1 RefSeq gene 4272670 4273284 . - . ID=gene3900;Name=YP_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19550;old_locus_tag=YP3750%2CYP_3750 NC_005810.1 Protein Homology CDS 4272670 4273284 . - 0 ID=cds3802;Parent=gene3900;Dbxref=Genbank:WP_002209210.1;Name=WP_002209210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209210.1;transl_table=11 NC_005810.1 RefSeq gene 4273611 4275200 . - . ID=gene3901;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YP_RS19555;old_locus_tag=YP3751%2CYP_3751 NC_005810.1 Protein Homology CDS 4273611 4275200 . - 0 ID=cds3803;Parent=gene3901;Dbxref=Genbank:WP_002209209.1;Name=WP_002209209.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_002209209.1;transl_table=11 NC_005810.1 RefSeq gene 4275379 4275822 . - . ID=gene3902;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YP_RS19560;old_locus_tag=YP3752%2CYP_3752 NC_005810.1 Protein Homology CDS 4275379 4275822 . - 0 ID=cds3804;Parent=gene3902;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NC_005810.1 RefSeq gene 4275767 4276204 . - . ID=gene3903;Name=YP_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19565;old_locus_tag=YP3753%2CYP_3753 NC_005810.1 Protein Homology CDS 4275767 4276204 . - 0 ID=cds3805;Parent=gene3903;Dbxref=Genbank:WP_002209207.1;Name=WP_002209207.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_002209207.1;transl_table=11 NC_005810.1 RefSeq gene 4276317 4277360 . + . ID=gene3904;Name=YP_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19570;old_locus_tag=YP3754%2CYP_3754 NC_005810.1 Protein Homology CDS 4276317 4277360 . + 0 ID=cds3806;Parent=gene3904;Dbxref=Genbank:WP_002209206.1;Name=WP_002209206.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase C;protein_id=WP_002209206.1;transl_table=11 NC_005810.1 RefSeq gene 4277617 4277703 . + . ID=gene3905;Name=YP_RS19575;gbkey=Gene;gene_biotype=tRNA;locus_tag=YP_RS19575;old_locus_tag=tRNA-Leu_6%2CYP_t73 NC_005810.1 tRNAscan-SE tRNA 4277617 4277703 . + . ID=rna92;Parent=gene3905;anticodon=(pos:4277651..4277653);gbkey=tRNA;product=tRNA-Leu NC_005810.1 tRNAscan-SE exon 4277617 4277703 . + . ID=id807;Parent=rna92;anticodon=(pos:4277651..4277653);gbkey=tRNA;product=tRNA-Leu NC_005810.1 RefSeq gene 4277873 4278205 . - . ID=gene3906;Name=YP_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19580;old_locus_tag=YP3755%2CYP_3755 NC_005810.1 Protein Homology CDS 4277873 4278205 . - 0 ID=cds3807;Parent=gene3906;Dbxref=Genbank:WP_002215232.1;Name=WP_002215232.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215232.1;transl_table=11 NC_005810.1 RefSeq protein_binding_site 4278182 4278200 . + . ID=id808;Dbxref=CollecTF:EXPSITE_00005470;Note=Transcription factor binding site for NP_992452. Originally reported in Yersinia pestis biovar Microtus strain 201~Evidence of regulation for: YP_3756;gbkey=protein_bind NC_005810.1 RefSeq protein_binding_site 4278359 4278377 . + . ID=id809;Dbxref=CollecTF:EXPSITE_00005480;Note=Transcription factor binding site for NP_992452. Originally reported in Yersinia pestis biovar Microtus strain 201~Evidence of regulation for: YP_3756;gbkey=protein_bind NC_005810.1 RefSeq gene 4278454 4279626 . + . ID=gene3907;Name=YP_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19585;old_locus_tag=YP3756%2CYP_3756 NC_005810.1 Protein Homology CDS 4278454 4279626 . + 0 ID=cds3808;Parent=gene3907;Dbxref=Genbank:WP_002230539.1;Name=WP_002230539.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002230539.1;transl_table=11 NC_005810.1 RefSeq gene 4280167 4281252 . - . ID=gene3908;Name=YP_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19590;old_locus_tag=YP3757%2CYP_3757 NC_005810.1 Protein Homology CDS 4280167 4281252 . - 0 ID=cds3809;Parent=gene3908;Dbxref=Genbank:WP_002209202.1;Name=WP_002209202.1;gbkey=CDS;product=pectinesterase;protein_id=WP_002209202.1;transl_table=11 NC_005810.1 RefSeq gene 4281585 4281908 . + . ID=gene3909;Name=YP_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19595;old_locus_tag=YP3758%2CYP_3758 NC_005810.1 Protein Homology CDS 4281585 4281908 . + 0 ID=cds3810;Parent=gene3909;Dbxref=Genbank:WP_002353658.1;Name=WP_002353658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002353658.1;transl_table=11 NC_005810.1 RefSeq gene 4282091 4282387 . + . ID=gene3910;Name=YP_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19600;old_locus_tag=YP3759%2CYP_3759 NC_005810.1 Protein Homology CDS 4282091 4282387 . + 0 ID=cds3811;Parent=gene3910;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4282474 4282513 . + . ID=id810;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4282521 4282712 . + . ID=gene3911;Name=YP_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19605 NC_005810.1 Protein Homology CDS 4282521 4282712 . + 0 ID=cds3812;Parent=gene3911;Dbxref=Genbank:WP_016256142.1;Name=WP_016256142.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256142.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4282617 4282664 . + . ID=id811;Note=degenerate repeat region containing 2 copies of a 24bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4282748 4285834 . - . ID=gene3912;Name=YP_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19610;old_locus_tag=YP3760%2CYP_3760 NC_005810.1 Protein Homology CDS 4282748 4285834 . - 0 ID=cds3813;Parent=gene3912;Dbxref=Genbank:WP_002209200.1;Name=WP_002209200.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_002209200.1;transl_table=11 NC_005810.1 RefSeq gene 4285834 4286916 . - . ID=gene3913;Name=YP_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19615;old_locus_tag=YP3761%2CYP_3761 NC_005810.1 Protein Homology CDS 4285834 4286916 . - 0 ID=cds3814;Parent=gene3913;Dbxref=Genbank:WP_002230541.1;Name=WP_002230541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230541.1;transl_table=11 NC_005810.1 RefSeq gene 4286968 4287201 . - . ID=gene3914;Name=YP_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19620;old_locus_tag=YP3762%2CYP_3762 NC_005810.1 Protein Homology CDS 4286968 4287201 . - 0 ID=cds3815;Parent=gene3914;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11 NC_005810.1 RefSeq gene 4287228 4287425 . - . ID=gene3915;Name=YP_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22295;old_locus_tag=YP3763%2CYP_3763 NC_005810.1 Protein Homology CDS 4287228 4287425 . - 0 ID=cds3816;Parent=gene3915;Dbxref=Genbank:WP_002215224.1;Name=WP_002215224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215224.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4287823 4287991 . + . ID=id812;gbkey=repeat_region NC_005810.1 RefSeq gene 4288011 4289243 . - . ID=gene3916;Name=YP_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19630;old_locus_tag=YP3764%2CYP_3764 NC_005810.1 Protein Homology CDS 4288011 4289243 . - 0 ID=cds3817;Parent=gene3916;Dbxref=Genbank:WP_002209197.1;Name=WP_002209197.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_002209197.1;transl_table=11 NC_005810.1 RefSeq gene 4289291 4290454 . - . ID=gene3917;Name=YP_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19635;old_locus_tag=YP3765%2CYP_3765 NC_005810.1 Protein Homology CDS 4289291 4290454 . - 0 ID=cds3818;Parent=gene3917;Dbxref=Genbank:WP_002209196.1;Name=WP_002209196.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002209196.1;transl_table=11 NC_005810.1 RefSeq gene 4290800 4292392 . - . ID=gene3918;Name=YP_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19640;old_locus_tag=YP3766%2CYP_3766 NC_005810.1 Protein Homology CDS 4290800 4292392 . - 0 ID=cds3819;Parent=gene3918;Dbxref=Genbank:WP_002230543.1;Name=WP_002230543.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002230543.1;transl_table=11 NC_005810.1 RefSeq gene 4292563 4293558 . - . ID=gene3919;Name=YP_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19645;old_locus_tag=YP3767%2CYP_3767 NC_005810.1 Protein Homology CDS 4292563 4293558 . - 0 ID=cds3820;Parent=gene3919;Dbxref=Genbank:WP_002230544.1;Name=WP_002230544.1;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230544.1;transl_table=11 NC_005810.1 RefSeq gene 4293587 4293793 . + . ID=gene3920;Name=YP_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19650;old_locus_tag=YP3768 NC_005810.1 Protein Homology CDS 4293587 4293793 . + 0 ID=cds3821;Parent=gene3920;Dbxref=Genbank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;product=membrane protein;protein_id=WP_002221620.1;transl_table=11 NC_005810.1 RefSeq gene 4293903 4295486 . + . ID=gene3921;Name=YP_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19655;old_locus_tag=YP3769%2CYP_3769 NC_005810.1 Protein Homology CDS 4293903 4295486 . + 0 ID=cds3822;Parent=gene3921;Dbxref=Genbank:WP_002209192.1;Name=WP_002209192.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_002209192.1;transl_table=11 NC_005810.1 RefSeq gene 4295480 4296535 . + . ID=gene3922;Name=YP_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19660;old_locus_tag=YP3770%2CYP_3770 NC_005810.1 Protein Homology CDS 4295480 4296535 . + 0 ID=cds3823;Parent=gene3922;Dbxref=Genbank:WP_002209191.1;Name=WP_002209191.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_002209191.1;transl_table=11 NC_005810.1 RefSeq gene 4296532 4297533 . + . ID=gene3923;Name=YP_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19665;old_locus_tag=YP3771%2CYP_3771 NC_005810.1 Protein Homology CDS 4296532 4297533 . + 0 ID=cds3824;Parent=gene3923;Dbxref=Genbank:WP_002209190.1;Name=WP_002209190.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_002209190.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4297541 4297561 . + . ID=id813;gbkey=repeat_region NC_005810.1 RefSeq gene 4297585 4298604 . + . ID=gene3924;Name=YP_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19670;old_locus_tag=YP3772%2CYP_3772 NC_005810.1 Protein Homology CDS 4297585 4298604 . + 0 ID=cds3825;Parent=gene3924;Dbxref=Genbank:WP_002209189.1;Name=WP_002209189.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_002209189.1;transl_table=11 NC_005810.1 RefSeq gene 4298660 4299535 . + . ID=gene3925;Name=YP_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19675;old_locus_tag=YP3773%2CYP_3773 NC_005810.1 Protein Homology CDS 4298660 4299535 . + 0 ID=cds3826;Parent=gene3925;Dbxref=Genbank:WP_002209188.1;Name=WP_002209188.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_002209188.1;transl_table=11 NC_005810.1 RefSeq gene 4299599 4299889 . + . ID=gene3926;Name=YP_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19680;old_locus_tag=YP3774%2CYP_3774 NC_005810.1 Protein Homology CDS 4299599 4299889 . + 0 ID=cds3827;Parent=gene3926;Dbxref=Genbank:WP_002230547.1;Name=WP_002230547.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002230547.1;transl_table=11 NC_005810.1 RefSeq gene 4300190 4300681 . + . ID=gene3927;Name=YP_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19685;old_locus_tag=YP3775%2CYP_3775 NC_005810.1 Protein Homology CDS 4300190 4300681 . + 0 ID=cds3828;Parent=gene3927;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11 NC_005810.1 RefSeq gene 4300743 4303301 . - . ID=gene3928;Name=YP_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19690;old_locus_tag=YP3776%2CYP_3776 NC_005810.1 Protein Homology CDS 4300743 4303301 . - 0 ID=cds3829;Parent=gene3928;Dbxref=Genbank:WP_002228120.1;Name=WP_002228120.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002228120.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4302703 4302738 . + . ID=id814;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4303666 4304748 . + . ID=gene3929;Name=YP_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19695;old_locus_tag=YP3777%2CYP_3777 NC_005810.1 Protein Homology CDS 4303666 4304748 . + 0 ID=cds3830;Parent=gene3929;Dbxref=Genbank:WP_002209182.1;Name=WP_002209182.1;gbkey=CDS;product=PTS fructose transporter subunit IIC;protein_id=WP_002209182.1;transl_table=11 NC_005810.1 RefSeq gene 4305089 4305409 . + . ID=gene3930;Name=YP_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19700;old_locus_tag=YP3778%2CYP_3778 NC_005810.1 Protein Homology CDS 4305089 4305409 . + 0 ID=cds3831;Parent=gene3930;Dbxref=Genbank:WP_002209181.1;Name=WP_002209181.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NC_005810.1 RefSeq gene 4305502 4305846 . + . ID=gene3931;Name=YP_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19705;old_locus_tag=YP3779%2CYP_3779 NC_005810.1 Protein Homology CDS 4305502 4305846 . + 0 ID=cds3832;Parent=gene3931;Dbxref=Genbank:WP_002209180.1;Name=WP_002209180.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11 NC_005810.1 RefSeq gene 4305839 4306714 . - . ID=gene3932;Name=YP_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19710;old_locus_tag=YP3780%2CYP_3780 NC_005810.1 Protein Homology CDS 4305839 4306714 . - 0 ID=cds3833;Parent=gene3932;Dbxref=Genbank:WP_002209179.1;Name=WP_002209179.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209179.1;transl_table=11 NC_005810.1 RefSeq gene 4306716 4307252 . - . ID=gene3933;Name=YP_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19715;old_locus_tag=YP3781%2CYP_3781 NC_005810.1 Protein Homology CDS 4306716 4307252 . - 0 ID=cds3834;Parent=gene3933;Dbxref=Genbank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4307433 4307476 . + . ID=id815;Note=degenerate repeat region containing 2 copies of a 22bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4307958 4309154 . + . ID=gene3934;Name=YP_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19720;old_locus_tag=YP3782%2CYP_3782 NC_005810.1 Protein Homology CDS 4307958 4309154 . + 0 ID=cds3835;Parent=gene3934;Dbxref=Genbank:WP_002230548.1;Name=WP_002230548.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230548.1;transl_table=11 NC_005810.1 RefSeq gene 4309165 4310211 . + . ID=gene3935;Name=YP_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19725;old_locus_tag=YP3783%2CYP_3783 NC_005810.1 Protein Homology CDS 4309165 4310211 . + 0 ID=cds3836;Parent=gene3935;Dbxref=Genbank:WP_002209176.1;Name=WP_002209176.1;gbkey=CDS;product=peptidase M48;protein_id=WP_002209176.1;transl_table=11 NC_005810.1 RefSeq gene 4310220 4310345 . + . ID=gene3936;Name=YP_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19730 NC_005810.1 Protein Homology CDS 4310220 4310345 . + 0 ID=cds3837;Parent=gene3936;Dbxref=Genbank:WP_002209175.1;Name=WP_002209175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209175.1;transl_table=11 NC_005810.1 RefSeq gene 4310357 4311511 . - . ID=gene3937;Name=YP_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19735;old_locus_tag=YP3784%2CYP_3784 NC_005810.1 Protein Homology CDS 4310357 4311511 . - 0 ID=cds3838;Parent=gene3937;Dbxref=Genbank:WP_011171972.1;Name=WP_011171972.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171972.1;transl_table=11 NC_005810.1 RefSeq gene 4311508 4312896 . - . ID=gene3938;Name=YP_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19740;old_locus_tag=YP3785%2CYP_3785 NC_005810.1 Protein Homology CDS 4311508 4312896 . - 0 ID=cds3839;Parent=gene3938;Dbxref=Genbank:WP_002209173.1;Name=WP_002209173.1;gbkey=CDS;product=ATPase involved in DNA repair;protein_id=WP_002209173.1;transl_table=11 NC_005810.1 RefSeq gene 4312961 4313158 . + . ID=gene3939;Name=YP_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19745;old_locus_tag=YP3786%2CYP_3786 NC_005810.1 Protein Homology CDS 4312961 4313158 . + 0 ID=cds3840;Parent=gene3939;Dbxref=Genbank:WP_002230552.1;Name=WP_002230552.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230552.1;transl_table=11 NC_005810.1 RefSeq gene 4313360 4313647 . + . ID=gene3940;Name=YP_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19750;old_locus_tag=YP3787%2CYP_3787 NC_005810.1 Protein Homology CDS 4313360 4313647 . + 0 ID=cds3841;Parent=gene3940;Dbxref=Genbank:WP_002215301.1;Name=WP_002215301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215301.1;transl_table=11 NC_005810.1 RefSeq gene 4313991 4315364 . - . ID=gene3941;Name=YP_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19755;old_locus_tag=YP3788%2CYP_3788 NC_005810.1 Protein Homology CDS 4313991 4315364 . - 0 ID=cds3842;Parent=gene3941;Dbxref=Genbank:WP_002209171.1;Name=WP_002209171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209171.1;transl_table=11 NC_005810.1 RefSeq gene 4315336 4316058 . - . ID=gene3942;Name=YP_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19760;old_locus_tag=YP3789%2CYP_3789 NC_005810.1 Protein Homology CDS 4315336 4316058 . - 0 ID=cds3843;Parent=gene3942;Dbxref=Genbank:WP_002230553.1;Name=WP_002230553.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002230553.1;transl_table=11 NC_005810.1 RefSeq gene 4316108 4317439 . - . ID=gene3943;Name=YP_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19765;old_locus_tag=YP3790%2CYP_3790 NC_005810.1 Protein Homology CDS 4316108 4317439 . - 0 ID=cds3844;Parent=gene3943;Dbxref=Genbank:WP_002230554.1;Name=WP_002230554.1;gbkey=CDS;product=restriction endonuclease subunit M;protein_id=WP_002230554.1;transl_table=11 NC_005810.1 RefSeq gene 4317578 4317841 . + . ID=gene3944;Name=YP_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19770 NC_005810.1 Protein Homology CDS 4317578 4317841 . + 0 ID=cds3845;Parent=gene3944;Dbxref=Genbank:WP_002209168.1;Name=WP_002209168.1;gbkey=CDS;product=transposase;protein_id=WP_002209168.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4318060 4318272 . + . ID=id816;gbkey=repeat_region NC_005810.1 RefSeq gene 4318166 4318396 . - . ID=gene3945;Name=YP_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19775;old_locus_tag=YP3792%2CYP_3792 NC_005810.1 Protein Homology CDS 4318166 4318396 . - 0 ID=cds3846;Parent=gene3945;Dbxref=Genbank:WP_002215297.1;Name=WP_002215297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215297.1;transl_table=11 NC_005810.1 RefSeq gene 4318463 4319779 . - . ID=gene3946;Name=YP_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19780;old_locus_tag=YP3793%2CYP_3793 NC_005810.1 Protein Homology CDS 4318463 4319779 . - 0 ID=cds3847;Parent=gene3946;Dbxref=Genbank:WP_002209167.1;Name=WP_002209167.1;gbkey=CDS;product=mcrBC 5-methylcytosine restriction system component family protein;protein_id=WP_002209167.1;transl_table=11 NC_005810.1 RefSeq gene 4319776 4321839 . - . ID=gene3947;Name=YP_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19785;old_locus_tag=YP3794%2CYP_3794 NC_005810.1 Protein Homology CDS 4319776 4321839 . - 0 ID=cds3848;Parent=gene3947;Dbxref=Genbank:WP_002209166.1;Name=WP_002209166.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209166.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4321886 4323843 . + . ID=id817;gbkey=repeat_region NC_005810.1 RefSeq region 4321887 4323839 . + . ID=id818;gbkey=mobile_element NC_005810.1 RefSeq gene 4321973 4322995 . + . ID=gene3948;Name=YP_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19790;old_locus_tag=YP3795%2CYP_3795 NC_005810.1 Protein Homology CDS 4321973 4322995 . + 0 ID=cds3849;Parent=gene3948;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005810.1 RefSeq gene 4322995 4323774 . + . ID=gene3949;Name=YP_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19795;old_locus_tag=YP3796%2CYP_3796 NC_005810.1 Protein Homology CDS 4322995 4323774 . + 0 ID=cds3850;Parent=gene3949;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005810.1 RefSeq gene 4323787 4324725 . + . ID=gene3950;Name=YP_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19800;old_locus_tag=YP3797 NC_005810.1 Protein Homology CDS 4323787 4324725 . + 0 ID=cds3851;Parent=gene3950;Dbxref=Genbank:WP_042468698.1;Name=WP_042468698.1;gbkey=CDS;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_042468698.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4324717 4324748 . + . ID=id819;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4324856 4325749 . - . ID=gene3951;Name=YP_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19805;old_locus_tag=YP3798%2CYP_3798 NC_005810.1 Protein Homology CDS 4324856 4325749 . - 0 ID=cds3852;Parent=gene3951;Dbxref=Genbank:WP_002210151.1;Name=WP_002210151.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11 NC_005810.1 RefSeq gene 4326011 4326715 . + . ID=gene3952;Name=YP_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19810;old_locus_tag=YP3799%2CYP_3799 NC_005810.1 Protein Homology CDS 4326011 4326715 . + 0 ID=cds3853;Parent=gene3952;Dbxref=Genbank:WP_002210150.1;Name=WP_002210150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210150.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4326749 4327276 . + . ID=id820;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4326749 4327200 . + . ID=id821;Note=degenerate repeat region containing 4 copies of a 113bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4327254 4327632 . - . ID=gene3953;Name=YP_RS22300;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=YP_RS22300 NC_005810.1 cmsearch ncRNA 4327254 4327632 . - . ID=rna93;Parent=gene3953;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_005810.1 cmsearch exon 4327254 4327632 . - . ID=id822;Parent=rna93;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_005810.1 RefSeq gene 4327652 4328551 . - . ID=gene3954;Name=YP_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19815;old_locus_tag=YP3801%2CYP_3801 NC_005810.1 Protein Homology CDS 4327652 4328551 . - 0 ID=cds3854;Parent=gene3954;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NC_005810.1 RefSeq gene 4328614 4330587 . + . ID=gene3955;Name=YP_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19820;old_locus_tag=YP3802%2CYP_3802 NC_005810.1 Protein Homology CDS 4328614 4330587 . + 0 ID=cds3855;Parent=gene3955;Dbxref=Genbank:WP_002228200.1;Name=WP_002228200.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_002228200.1;transl_table=11 NC_005810.1 RefSeq gene 4330671 4331024 . + . ID=gene3956;Name=YP_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19825;old_locus_tag=YP3803%2CYP_3803 NC_005810.1 Protein Homology CDS 4330671 4331024 . + 0 ID=cds3856;Parent=gene3956;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11 NC_005810.1 RefSeq gene 4331295 4331885 . + . ID=gene3957;Name=YP_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19830;old_locus_tag=YP3804%2CYP_3804 NC_005810.1 Protein Homology CDS 4331295 4331885 . + 0 ID=cds3857;Parent=gene3957;Dbxref=Genbank:WP_002210146.1;Name=WP_002210146.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_002210146.1;transl_table=11 NC_005810.1 RefSeq gene 4331896 4332471 . + . ID=gene3958;Name=YP_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19835;old_locus_tag=YP3805%2CYP_3805 NC_005810.1 Protein Homology CDS 4331896 4332471 . + 0 ID=cds3858;Parent=gene3958;Dbxref=Genbank:WP_002210145.1;Name=WP_002210145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210145.1;transl_table=11 NC_005810.1 RefSeq gene 4332678 4333403 . - . ID=gene3959;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YP_RS19840;old_locus_tag=YP3806%2CYP_3806 NC_005810.1 Protein Homology CDS 4332678 4333403 . - 0 ID=cds3859;Parent=gene3959;Dbxref=Genbank:WP_002210144.1;Name=WP_002210144.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_002210144.1;transl_table=11 NC_005810.1 RefSeq gene 4333400 4334053 . - . ID=gene3960;Name=YP_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19845;old_locus_tag=YP3807%2CYP_3807 NC_005810.1 Protein Homology CDS 4333400 4334053 . - 0 ID=cds3860;Parent=gene3960;Dbxref=Genbank:WP_002210143.1;Name=WP_002210143.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_002210143.1;transl_table=11 NC_005810.1 RefSeq gene 4334083 4334277 . - . ID=gene3961;Name=YP_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19850;old_locus_tag=YP3808%2CYP_3808 NC_005810.1 Protein Homology CDS 4334083 4334277 . - 0 ID=cds3861;Parent=gene3961;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11 NC_005810.1 RefSeq gene 4334295 4336631 . - . ID=gene3962;Name=YP_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19855;old_locus_tag=YP3809%2CYP_3809 NC_005810.1 Protein Homology CDS 4334295 4336631 . - 0 ID=cds3862;Parent=gene3962;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11 NC_005810.1 RefSeq gene 4336699 4336914 . - . ID=gene3963;Name=YP_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19860 NC_005810.1 Protein Homology CDS 4336699 4336914 . - 0 ID=cds3863;Parent=gene3963;Dbxref=Genbank:WP_002216211.1;Name=WP_002216211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216211.1;transl_table=11 NC_005810.1 RefSeq gene 4336895 4337818 . - . ID=gene3964;Name=YP_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19865;old_locus_tag=YP3810%2CYP_3810 NC_005810.1 Protein Homology CDS 4336895 4337818 . - 0 ID=cds3864;Parent=gene3964;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11 NC_005810.1 RefSeq gene 4338641 4343098 . + . ID=gene3965;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YP_RS19870;old_locus_tag=YP3811%2CYP_3811 NC_005810.1 Protein Homology CDS 4338641 4343098 . + 0 ID=cds3865;Parent=gene3965;Dbxref=Genbank:WP_002228691.1;Name=WP_002228691.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_002228691.1;transl_table=11 NC_005810.1 RefSeq gene 4343108 4344526 . + . ID=gene3966;Name=YP_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19875;old_locus_tag=YP3812%2CYP_3812 NC_005810.1 Protein Homology CDS 4343108 4344526 . + 0 ID=cds3866;Parent=gene3966;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11 NC_005810.1 RefSeq gene 4344967 4345452 . + . ID=gene3967;Name=YP_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19880;old_locus_tag=YP3813%2CYP_3813 NC_005810.1 Protein Homology CDS 4344967 4345452 . + 0 ID=cds3867;Parent=gene3967;Dbxref=Genbank:WP_002224291.1;Name=WP_002224291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224291.1;transl_table=11 NC_005810.1 RefSeq gene 4345605 4346120 . - . ID=gene3968;Name=YP_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19885;old_locus_tag=YP3814%2CYP_3814 NC_005810.1 Protein Homology CDS 4345605 4346120 . - 0 ID=cds3868;Parent=gene3968;Dbxref=Genbank:WP_002216203.1;Name=WP_002216203.1;gbkey=CDS;product=peptidase;protein_id=WP_002216203.1;transl_table=11 NC_005810.1 RefSeq gene 4346126 4346767 . - . ID=gene3969;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YP_RS19890;old_locus_tag=YP3815%2CYP_3815 NC_005810.1 Protein Homology CDS 4346126 4346767 . - 0 ID=cds3869;Parent=gene3969;Dbxref=Genbank:WP_002210135.1;Name=WP_002210135.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_002210135.1;transl_table=11 NC_005810.1 RefSeq gene 4346947 4347144 . + . ID=gene3970;Name=YP_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19895;old_locus_tag=YP3816%2CYP_3816 NC_005810.1 Protein Homology CDS 4346947 4347144 . + 0 ID=cds3870;Parent=gene3970;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NC_005810.1 RefSeq gene 4347141 4347533 . - . ID=gene3971;Name=YP_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19900;old_locus_tag=YP3817%2CYP_3817 NC_005810.1 Protein Homology CDS 4347141 4347533 . - 0 ID=cds3871;Parent=gene3971;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NC_005810.1 RefSeq gene 4347548 4347976 . - . ID=gene3972;Name=YP_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19905;old_locus_tag=YP3818%2CYP_3818 NC_005810.1 Protein Homology CDS 4347548 4347976 . - 0 ID=cds3872;Parent=gene3972;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NC_005810.1 RefSeq gene 4348290 4349417 . - . ID=gene3973;Name=YP_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19910;old_locus_tag=YP3819%2CYP_3819 NC_005810.1 Protein Homology CDS 4348290 4349417 . - 0 ID=cds3873;Parent=gene3973;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11 NC_005810.1 RefSeq gene 4349641 4350045 . + . ID=gene3974;Name=YP_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19915;old_locus_tag=YP3820%2CYP_3820 NC_005810.1 Protein Homology CDS 4349641 4350045 . + 0 ID=cds3874;Parent=gene3974;Dbxref=Genbank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210130.1;transl_table=11 NC_005810.1 RefSeq gene 4350316 4351689 . + . ID=gene3975;Name=YP_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19920;old_locus_tag=YP3821%2CYP_3821 NC_005810.1 Protein Homology CDS 4350316 4351689 . + 0 ID=cds3875;Parent=gene3975;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4351695 4352412 . + . ID=id823;gbkey=repeat_region NC_005810.1 RefSeq region 4351698 4352409 . - . ID=id824;gbkey=mobile_element NC_005810.1 RefSeq gene 4351806 4352264 . - . ID=gene3976;Name=YP_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19925;old_locus_tag=YP3822%2CYP_3822 NC_005810.1 Protein Homology CDS 4351806 4352264 . - 0 ID=cds3876;Parent=gene3976;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005810.1 RefSeq gene 4352490 4353578 . + . ID=gene3977;Name=YP_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19930;old_locus_tag=YP3823%2CYP_3823 NC_005810.1 Protein Homology CDS 4352490 4353578 . + 0 ID=cds3877;Parent=gene3977;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11 NC_005810.1 RefSeq gene 4353759 4355021 . - . ID=gene3978;Name=YP_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19935;old_locus_tag=YP3824%2CYP_3824 NC_005810.1 Protein Homology CDS 4353759 4355021 . - 0 ID=cds3878;Parent=gene3978;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NC_005810.1 RefSeq gene 4355175 4355429 . - . ID=gene3979;Name=YP_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19940;old_locus_tag=YP3825%2CYP_3825 NC_005810.1 Protein Homology CDS 4355175 4355429 . - 0 ID=cds3879;Parent=gene3979;Dbxref=Genbank:WP_002210126.1;Name=WP_002210126.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210126.1;transl_table=11 NC_005810.1 RefSeq gene 4355576 4355878 . - . ID=gene3980;Name=YP_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19945;old_locus_tag=YP3826%2CYP_3826 NC_005810.1 Protein Homology CDS 4355576 4355878 . - 0 ID=cds3880;Parent=gene3980;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11 NC_005810.1 RefSeq gene 4355914 4356537 . - . ID=gene3981;Name=YP_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19950;old_locus_tag=YP3827%2CYP_3827 NC_005810.1 Protein Homology CDS 4355914 4356537 . - 0 ID=cds3881;Parent=gene3981;Dbxref=Genbank:WP_002210124.1;Name=WP_002210124.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter substrate-binding protein;protein_id=WP_002210124.1;transl_table=11 NC_005810.1 RefSeq gene 4356550 4357107 . - . ID=gene3982;Name=YP_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19955;old_locus_tag=YP3828%2CYP_3828 NC_005810.1 Protein Homology CDS 4356550 4357107 . - 0 ID=cds3882;Parent=gene3982;Dbxref=Genbank:WP_016595794.1;Name=WP_016595794.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_016595794.1;transl_table=11 NC_005810.1 RefSeq gene 4357112 4357894 . - . ID=gene3983;Name=YP_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19960;old_locus_tag=YP3829%2CYP_3829 NC_005810.1 Protein Homology CDS 4357112 4357894 . - 0 ID=cds3883;Parent=gene3983;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11 NC_005810.1 RefSeq gene 4358112 4358930 . - . ID=gene3984;Name=YP_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19965;old_locus_tag=YP3830%2CYP_3830 NC_005810.1 Protein Homology CDS 4358112 4358930 . - 0 ID=cds3884;Parent=gene3984;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11 NC_005810.1 RefSeq gene 4359195 4360169 . + . ID=gene3985;Name=YP_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19970;old_locus_tag=YP3831%2CYP_3831 NC_005810.1 Protein Homology CDS 4359195 4360169 . + 0 ID=cds3885;Parent=gene3985;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11 NC_005810.1 RefSeq gene 4360280 4361266 . + . ID=gene3986;Name=YP_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19975;old_locus_tag=YP3832%2CYP_3832 NC_005810.1 Protein Homology CDS 4360280 4361266 . + 0 ID=cds3886;Parent=gene3986;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NC_005810.1 RefSeq gene 4361515 4362078 . + . ID=gene3987;Name=YP_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19980;old_locus_tag=YP3833%2CYP_3833 NC_005810.1 Protein Homology CDS 4361515 4362078 . + 0 ID=cds3887;Parent=gene3987;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NC_005810.1 RefSeq gene 4362075 4362638 . + . ID=gene3988;Name=YP_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19985;old_locus_tag=YP3834%2CYP_3834 NC_005810.1 Protein Homology CDS 4362075 4362638 . + 0 ID=cds3888;Parent=gene3988;Dbxref=Genbank:WP_002218352.1;Name=WP_002218352.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002218352.1;transl_table=11 NC_005810.1 RefSeq gene 4362622 4363167 . + . ID=gene3989;Name=YP_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19990;old_locus_tag=YP3835%2CYP_3835 NC_005810.1 Protein Homology CDS 4362622 4363167 . + 0 ID=cds3889;Parent=gene3989;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11 NC_005810.1 RefSeq gene 4363174 4363899 . + . ID=gene3990;Name=YP_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS19995;old_locus_tag=YP3836%2CYP_3836 NC_005810.1 Protein Homology CDS 4363174 4363899 . + 0 ID=cds3890;Parent=gene3990;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NC_005810.1 RefSeq gene 4363961 4365394 . + . ID=gene3991;Name=YP_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20000;old_locus_tag=YP3837%2CYP_3837 NC_005810.1 Protein Homology CDS 4363961 4365394 . + 0 ID=cds3891;Parent=gene3991;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11 NC_005810.1 RefSeq gene 4365418 4365705 . + . ID=gene3992;Name=YP_RS20005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS20005;old_locus_tag=YP3838;pseudo=true NC_005810.1 Protein Homology CDS 4365418 4365705 . + 0 ID=cds3892;Parent=gene3992;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4365523..4365525%2Caa:Other);transl_table=11 NC_005810.1 RefSeq gene 4365823 4366305 . + . ID=gene3993;Name=YP_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20010;old_locus_tag=YP3839%2CYP_3839 NC_005810.1 Protein Homology CDS 4365823 4366305 . + 0 ID=cds3893;Parent=gene3993;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11 NC_005810.1 RefSeq gene 4366611 4367465 . + . ID=gene3994;Name=YP_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20015;old_locus_tag=YP3840%2CYP_3840 NC_005810.1 Protein Homology CDS 4366611 4367465 . + 0 ID=cds3894;Parent=gene3994;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11 NC_005810.1 RefSeq gene 4367462 4367734 . + . ID=gene3995;Name=YP_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20020;old_locus_tag=YP3841%2CYP_3841 NC_005810.1 Protein Homology CDS 4367462 4367734 . + 0 ID=cds3895;Parent=gene3995;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11 NC_005810.1 RefSeq gene 4368072 4369007 . + . ID=gene3996;Name=YP_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20025;old_locus_tag=YP3842%2CYP_3842 NC_005810.1 Protein Homology CDS 4368072 4369007 . + 0 ID=cds3896;Parent=gene3996;Dbxref=Genbank:WP_002210111.1;Name=WP_002210111.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_002210111.1;transl_table=11 NC_005810.1 RefSeq gene 4369019 4369483 . + . ID=gene3997;Name=YP_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20030;old_locus_tag=YP3843%2CYP_3843 NC_005810.1 Protein Homology CDS 4369019 4369483 . + 0 ID=cds3897;Parent=gene3997;Dbxref=Genbank:WP_002210110.1;Name=WP_002210110.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_002210110.1;transl_table=11 NC_005810.1 RefSeq gene 4369621 4370007 . + . ID=gene3998;Name=YP_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20035;old_locus_tag=YP3844%2CYP_3844 NC_005810.1 Protein Homology CDS 4369621 4370007 . + 0 ID=cds3898;Parent=gene3998;Dbxref=Genbank:WP_002210109.1;Name=WP_002210109.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210109.1;transl_table=11 NC_005810.1 RefSeq gene 4370306 4370782 . + . ID=gene3999;Name=YP_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20040;old_locus_tag=YP3845%2CYP_3845 NC_005810.1 Protein Homology CDS 4370306 4370782 . + 0 ID=cds3899;Parent=gene3999;Dbxref=Genbank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210107.1;transl_table=11 NC_005810.1 RefSeq gene 4371016 4371969 . + . ID=gene4000;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YP_RS20045;old_locus_tag=YP3846%2CYP_3846 NC_005810.1 Protein Homology CDS 4371016 4371969 . + 0 ID=cds3900;Parent=gene4000;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11 NC_005810.1 RefSeq gene 4372380 4373795 . + . ID=gene4001;Name=YP_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20050;old_locus_tag=YP3847%2CYP_3847 NC_005810.1 Protein Homology CDS 4372380 4373795 . + 0 ID=cds3901;Parent=gene4001;Dbxref=Genbank:WP_002215779.1;Name=WP_002215779.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_002215779.1;transl_table=11 NC_005810.1 RefSeq gene 4373890 4375557 . + . ID=gene4002;Name=YP_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20055;old_locus_tag=YP3848%2CYP_3848 NC_005810.1 Protein Homology CDS 4373890 4375557 . + 0 ID=cds3902;Parent=gene4002;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11 NC_005810.1 RefSeq gene 4375910 4376320 . + . ID=gene4003;Name=YP_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20060;old_locus_tag=YP3849%2CYP_3849 NC_005810.1 Protein Homology CDS 4375910 4376320 . + 0 ID=cds3903;Parent=gene4003;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NC_005810.1 RefSeq gene 4376544 4376930 . - . ID=gene4004;Name=YP_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20065;old_locus_tag=YP3850%2CYP_3850 NC_005810.1 Protein Homology CDS 4376544 4376930 . - 0 ID=cds3904;Parent=gene4004;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11 NC_005810.1 RefSeq gene 4377138 4377782 . - . ID=gene4005;Name=YP_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20070;old_locus_tag=YP3851%2CYP_3851 NC_005810.1 Protein Homology CDS 4377138 4377782 . - 0 ID=cds3905;Parent=gene4005;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NC_005810.1 RefSeq gene 4378031 4379371 . - . ID=gene4006;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YP_RS20075;old_locus_tag=YP3852%2CYP_3852 NC_005810.1 Protein Homology CDS 4378031 4379371 . - 0 ID=cds3906;Parent=gene4006;Dbxref=Genbank:WP_002210100.1;Name=WP_002210100.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_002210100.1;transl_table=11 NC_005810.1 RefSeq gene 4379552 4380100 . + . ID=gene4007;Name=YP_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20080;old_locus_tag=YP3853%2CYP_3853 NC_005810.1 Protein Homology CDS 4379552 4380100 . + 0 ID=cds3907;Parent=gene4007;Dbxref=Genbank:WP_002210099.1;Name=WP_002210099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210099.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4380175 4380222 . + . ID=id825;Note=degenerate repeat region containing 3 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4380228 4380509 . - . ID=gene4008;Name=YP_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20085;old_locus_tag=YP3854%2CYP_3854 NC_005810.1 Protein Homology CDS 4380228 4380509 . - 0 ID=cds3908;Parent=gene4008;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11 NC_005810.1 RefSeq gene 4380514 4380987 . - . ID=gene4009;Name=YP_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20090;old_locus_tag=YP3855%2CYP_3855 NC_005810.1 Protein Homology CDS 4380514 4380987 . - 0 ID=cds3909;Parent=gene4009;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4381042 4381077 . + . ID=id826;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4381085 4381120 . + . ID=id827;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4381182 4381520 . - . ID=gene4010;Name=YP_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20095 NC_005810.1 Protein Homology CDS 4381182 4381520 . - 0 ID=cds3910;Parent=gene4010;Dbxref=Genbank:WP_002214289.1;Name=WP_002214289.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002214289.1;transl_table=11 NC_005810.1 RefSeq gene 4381517 4382650 . - . ID=gene4011;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YP_RS20100;old_locus_tag=YP3856 NC_005810.1 Protein Homology CDS 4381517 4382650 . - 0 ID=cds3911;Parent=gene4011;Dbxref=Genbank:WP_002214290.1;Name=WP_002214290.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_002214290.1;transl_table=11 NC_005810.1 RefSeq gene 4382917 4384872 . - . ID=gene4012;Name=YP_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20105;old_locus_tag=YP3857%2CYP_3857 NC_005810.1 Protein Homology CDS 4382917 4384872 . - 0 ID=cds3912;Parent=gene4012;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NC_005810.1 RefSeq gene 4384874 4385809 . - . ID=gene4013;Name=YP_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20110;old_locus_tag=YP3858%2CYP_3858 NC_005810.1 Protein Homology CDS 4384874 4385809 . - 0 ID=cds3913;Parent=gene4013;Dbxref=Genbank:WP_002210094.1;Name=WP_002210094.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NC_005810.1 RefSeq gene 4385817 4386020 . - . ID=gene4014;Name=YP_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20115;old_locus_tag=YP3859%2CYP_3859 NC_005810.1 Protein Homology CDS 4385817 4386020 . - 0 ID=cds3914;Parent=gene4014;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11 NC_005810.1 RefSeq gene 4386323 4387234 . + . ID=gene4015;Name=YP_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20120;old_locus_tag=YP3861 NC_005810.1 Protein Homology CDS 4386323 4387234 . + 0 ID=cds3915;Parent=gene4015;Dbxref=Genbank:WP_002210092.1;Name=WP_002210092.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210092.1;transl_table=11 NC_005810.1 RefSeq gene 4387495 4388361 . + . ID=gene4016;Name=YP_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20125;old_locus_tag=YP3862%2CYP_3862 NC_005810.1 Protein Homology CDS 4387495 4388361 . + 0 ID=cds3916;Parent=gene4016;Dbxref=Genbank:WP_002214297.1;Name=WP_002214297.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002214297.1;transl_table=11 NC_005810.1 RefSeq gene 4388597 4391104 . + . ID=gene4017;Name=YP_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20130;old_locus_tag=YP3864%2CYP_3864 NC_005810.1 Protein Homology CDS 4388597 4391104 . + 0 ID=cds3917;Parent=gene4017;Dbxref=Genbank:WP_002230509.1;Name=WP_002230509.1;gbkey=CDS;product=toxin;protein_id=WP_002230509.1;transl_table=11 NC_005810.1 RefSeq gene 4391145 4394738 . + . ID=gene4018;Name=YP_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20135;old_locus_tag=YP3865%2CYP_3865 NC_005810.1 Protein Homology CDS 4391145 4394738 . + 0 ID=cds3918;Parent=gene4018;Dbxref=Genbank:WP_002220204.1;Name=WP_002220204.1;gbkey=CDS;product=toxin;protein_id=WP_002220204.1;transl_table=11 NC_005810.1 RefSeq gene 4394795 4399285 . + . ID=gene4019;Name=YP_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20140;old_locus_tag=YP3866%2CYP_3866 NC_005810.1 Protein Homology CDS 4394795 4399285 . + 0 ID=cds3919;Parent=gene4019;Dbxref=Genbank:WP_002210089.1;Name=WP_002210089.1;gbkey=CDS;product=toxin;protein_id=WP_002210089.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4396227 4396262 . + . ID=id828;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4399419 4399721 . + . ID=gene4020;Name=YP_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20145;old_locus_tag=YP3867%2CYP_3867 NC_005810.1 Protein Homology CDS 4399419 4399721 . + 0 ID=cds3920;Parent=gene4020;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11 NC_005810.1 RefSeq gene 4399734 4400135 . + . ID=gene4021;Name=YP_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20150;old_locus_tag=YP3868%2CYP_3868 NC_005810.1 Protein Homology CDS 4399734 4400135 . + 0 ID=cds3921;Parent=gene4021;Dbxref=Genbank:WP_002210087.1;Name=WP_002210087.1;gbkey=CDS;product=peptidase M15;protein_id=WP_002210087.1;transl_table=11 NC_005810.1 RefSeq gene 4400132 4400491 . + . ID=gene4022;Name=YP_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20155;old_locus_tag=YP3869%2CYP_3869 NC_005810.1 Protein Homology CDS 4400132 4400491 . + 0 ID=cds3922;Parent=gene4022;Dbxref=Genbank:WP_002210086.1;Name=WP_002210086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210086.1;transl_table=11 NC_005810.1 RefSeq gene 4400692 4403523 . + . ID=gene4023;Name=YP_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20165;old_locus_tag=YP3871%2CYP_3871 NC_005810.1 Protein Homology CDS 4400692 4403523 . + 0 ID=cds3923;Parent=gene4023;Dbxref=Genbank:WP_002210084.1;Name=WP_002210084.1;gbkey=CDS;product=toxin;protein_id=WP_002210084.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4400719 4402667 . + . ID=id829;gbkey=repeat_region NC_005810.1 RefSeq gene 4403548 4406406 . + . ID=gene4024;Name=YP_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20170;old_locus_tag=YP3872%2CYP_3872 NC_005810.1 Protein Homology CDS 4403548 4406406 . + 0 ID=cds3924;Parent=gene4024;Dbxref=Genbank:WP_002210083.1;Name=WP_002210083.1;gbkey=CDS;product=toxin;protein_id=WP_002210083.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4403575 4405523 . + . ID=id830;gbkey=repeat_region NC_005810.1 RefSeq gene 4406609 4408054 . - . ID=gene4025;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YP_RS20175;old_locus_tag=YP3874%2CYP_3874 NC_005810.1 Protein Homology CDS 4406609 4408054 . - 0 ID=cds3925;Parent=gene4025;Dbxref=Genbank:WP_002210082.1;Name=WP_002210082.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_002210082.1;transl_table=11 NC_005810.1 RefSeq gene 4408066 4408935 . - . ID=gene4026;Name=YP_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20180;old_locus_tag=YP3875%2CYP_3875 NC_005810.1 Protein Homology CDS 4408066 4408935 . - 0 ID=cds3926;Parent=gene4026;Dbxref=Genbank:WP_002210081.1;Name=WP_002210081.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_002210081.1;transl_table=11 NC_005810.1 RefSeq gene 4408932 4412834 . - . ID=gene4027;Name=YP_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20185;old_locus_tag=YP3876%2CYP_3876 NC_005810.1 Protein Homology CDS 4408932 4412834 . - 0 ID=cds3927;Parent=gene4027;Dbxref=Genbank:WP_013060352.1;Name=WP_013060352.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060352.1;transl_table=11 NC_005810.1 RefSeq gene 4412949 4414418 . - . ID=gene4028;Name=YP_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20190;old_locus_tag=YP3877%2CYP_3877 NC_005810.1 Protein Homology CDS 4412949 4414418 . - 0 ID=cds3928;Parent=gene4028;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NC_005810.1 RefSeq gene 4414408 4415001 . - . ID=gene4029;Name=YP_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20195;old_locus_tag=YP3878%2CYP_3878 NC_005810.1 Protein Homology CDS 4414408 4415001 . - 0 ID=cds3929;Parent=gene4029;Dbxref=Genbank:WP_002210078.1;Name=WP_002210078.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210078.1;transl_table=11 NC_005810.1 RefSeq gene 4415015 4415503 . - . ID=gene4030;Name=YP_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20200;old_locus_tag=YP3879%2CYP_3879 NC_005810.1 Protein Homology CDS 4415015 4415503 . - 0 ID=cds3930;Parent=gene4030;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NC_005810.1 RefSeq gene 4415500 4416495 . - . ID=gene4031;Name=YP_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20205;old_locus_tag=YP3880%2CYP_3880 NC_005810.1 Protein Homology CDS 4415500 4416495 . - 0 ID=cds3931;Parent=gene4031;Dbxref=Genbank:WP_002210076.1;Name=WP_002210076.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NC_005810.1 RefSeq gene 4416699 4417742 . - . ID=gene4032;Name=YP_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20210;old_locus_tag=YP3881%2CYP_3881 NC_005810.1 Protein Homology CDS 4416699 4417742 . - 0 ID=cds3932;Parent=gene4032;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NC_005810.1 RefSeq gene 4418079 4419995 . - . ID=gene4033;Name=YP_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20215;old_locus_tag=YP3882%2CYP_3882 NC_005810.1 Protein Homology CDS 4418079 4419995 . - 0 ID=cds3933;Parent=gene4033;Dbxref=Genbank:WP_002210075.1;Name=WP_002210075.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210075.1;transl_table=11 NC_005810.1 RefSeq gene 4420396 4421373 . + . ID=gene4034;Name=YP_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20220;old_locus_tag=YP3883%2CYP_3883 NC_005810.1 Protein Homology CDS 4420396 4421373 . + 0 ID=cds3934;Parent=gene4034;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11 NC_005810.1 RefSeq gene 4421596 4422696 . + . ID=gene4035;Name=YP_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20225;old_locus_tag=YP3884%2CYP_3884 NC_005810.1 Protein Homology CDS 4421596 4422696 . + 0 ID=cds3935;Parent=gene4035;Dbxref=Genbank:WP_002210073.1;Name=WP_002210073.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfoxide reductase catalytic subunit YedY;protein_id=WP_002210073.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4421610 4421645 . + . ID=id831;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4422696 4423316 . + . ID=gene4036;Name=YP_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20230;old_locus_tag=YP3885%2CYP_3885 NC_005810.1 Protein Homology CDS 4422696 4423316 . + 0 ID=cds3936;Parent=gene4036;Dbxref=Genbank:WP_002210072.1;Name=WP_002210072.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_002210072.1;transl_table=11 NC_005810.1 RefSeq gene 4423579 4424031 . + . ID=gene4037;Name=YP_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20235;old_locus_tag=YP3886%2CYP_3886 NC_005810.1 Protein Homology CDS 4423579 4424031 . + 0 ID=cds3937;Parent=gene4037;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NC_005810.1 RefSeq gene 4424189 4424653 . + . ID=gene4038;Name=YP_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20240;old_locus_tag=YP3887%2CYP_3887 NC_005810.1 Protein Homology CDS 4424189 4424653 . + 0 ID=cds3938;Parent=gene4038;Dbxref=Genbank:WP_002230506.1;Name=WP_002230506.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_002230506.1;transl_table=11 NC_005810.1 RefSeq gene 4424665 4426014 . + . ID=gene4039;Name=YP_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20245;old_locus_tag=YP3888%2CYP_3888 NC_005810.1 Protein Homology CDS 4424665 4426014 . + 0 ID=cds3939;Parent=gene4039;Dbxref=Genbank:WP_002210069.1;Name=WP_002210069.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002210069.1;transl_table=11 NC_005810.1 RefSeq gene 4427124 4427366 . + . ID=gene4040;Name=YP_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20250;old_locus_tag=YP3889%2CYP_3889 NC_005810.1 Protein Homology CDS 4427124 4427366 . + 0 ID=cds3940;Parent=gene4040;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11 NC_005810.1 RefSeq gene 4427356 4428810 . + . ID=gene4041;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YP_RS20255;old_locus_tag=YP3890%2CYP_3890 NC_005810.1 Protein Homology CDS 4427356 4428810 . + 0 ID=cds3941;Parent=gene4041;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NC_005810.1 RefSeq gene 4428886 4429767 . + . ID=gene4042;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YP_RS20260;old_locus_tag=YP3891%2CYP_3891 NC_005810.1 Protein Homology CDS 4428886 4429767 . + 0 ID=cds3942;Parent=gene4042;Dbxref=Genbank:WP_002220963.1;Name=WP_002220963.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NC_005810.1 RefSeq gene 4430356 4431321 . + . ID=gene4043;Name=YP_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20265;old_locus_tag=YP3892%2CYP_3892 NC_005810.1 Protein Homology CDS 4430356 4431321 . + 0 ID=cds3943;Parent=gene4043;Dbxref=Genbank:WP_002210062.1;Name=WP_002210062.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_002210062.1;transl_table=11 NC_005810.1 RefSeq gene 4431346 4431642 . + . ID=gene4044;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YP_RS20270;old_locus_tag=YP3893%2CYP_3893 NC_005810.1 Protein Homology CDS 4431346 4431642 . + 0 ID=cds3944;Parent=gene4044;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4431838 4432236 . + . ID=id832;gbkey=repeat_region NC_005810.1 RefSeq gene 4432396 4432872 . - . ID=gene4045;Name=YP_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20275;old_locus_tag=YP3895%2CYP_3895 NC_005810.1 Protein Homology CDS 4432396 4432872 . - 0 ID=cds3945;Parent=gene4045;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11 NC_005810.1 RefSeq gene 4432938 4433600 . - . ID=gene4046;Name=YP_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20280;old_locus_tag=YP3896%2CYP_3896 NC_005810.1 Protein Homology CDS 4432938 4433600 . - 0 ID=cds3946;Parent=gene4046;Dbxref=Genbank:WP_002210059.1;Name=WP_002210059.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210059.1;transl_table=11 NC_005810.1 RefSeq gene 4433690 4435054 . - . ID=gene4047;Name=YP_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20285;old_locus_tag=YP3897%2CYP_3897 NC_005810.1 Protein Homology CDS 4433690 4435054 . - 0 ID=cds3947;Parent=gene4047;Dbxref=Genbank:WP_002210058.1;Name=WP_002210058.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210058.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4435147 4435174 . + . ID=id833;Note=exact repeat region containing 2 copies of a 14 bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4435208 4435603 . - . ID=gene4048;Name=YP_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20290;old_locus_tag=YP3898%2CYP_3898 NC_005810.1 Protein Homology CDS 4435208 4435603 . - 0 ID=cds3948;Parent=gene4048;Dbxref=Genbank:WP_002217470.1;Name=WP_002217470.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_002217470.1;transl_table=11 NC_005810.1 RefSeq gene 4435781 4436671 . - . ID=gene4049;Name=YP_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20295;old_locus_tag=YP3899%2CYP_3899 NC_005810.1 Protein Homology CDS 4435781 4436671 . - 0 ID=cds3949;Parent=gene4049;Dbxref=Genbank:WP_002210056.1;Name=WP_002210056.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_002210056.1;transl_table=11 NC_005810.1 RefSeq gene 4436736 4437548 . - . ID=gene4050;Name=YP_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20300;old_locus_tag=YP3900%2CYP_3900 NC_005810.1 Protein Homology CDS 4436736 4437548 . - 0 ID=cds3950;Parent=gene4050;Dbxref=Genbank:WP_002210055.1;Name=WP_002210055.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002210055.1;transl_table=11 NC_005810.1 RefSeq gene 4438024 4438491 . + . ID=gene4051;Name=YP_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20305;old_locus_tag=YP3901%2CYP_3901 NC_005810.1 Protein Homology CDS 4438024 4438491 . + 0 ID=cds3951;Parent=gene4051;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11 NC_005810.1 RefSeq gene 4438782 4438931 . + . ID=gene4052;Name=YP_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20310;old_locus_tag=YP3902%2CYP_3902 NC_005810.1 Protein Homology CDS 4438782 4438931 . + 0 ID=cds3952;Parent=gene4052;Dbxref=Genbank:WP_002374696.1;Name=WP_002374696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002374696.1;transl_table=11 NC_005810.1 cmsearch region 4438845 4439287 . + . ID=id834;Note=cspA;gbkey=misc_feature NC_005810.1 RefSeq repeat_region 4439006 4439208 . + . ID=id835;gbkey=repeat_region NC_005810.1 RefSeq gene 4439024 4439236 . + . ID=gene4053;Name=YP_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20315;old_locus_tag=YP3903%2CYP_3903 NC_005810.1 Protein Homology CDS 4439024 4439236 . + 0 ID=cds3953;Parent=gene4053;Dbxref=Genbank:WP_002210053.1;Name=WP_002210053.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210053.1;transl_table=11 NC_005810.1 cmsearch region 4439322 4439735 . + . ID=id836;Note=cspA;gbkey=misc_feature NC_005810.1 RefSeq repeat_region 4439478 4439680 . + . ID=id837;gbkey=repeat_region NC_005810.1 RefSeq gene 4439496 4439708 . + . ID=gene4054;Name=YP_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20320;old_locus_tag=YP3904 NC_005810.1 Protein Homology CDS 4439496 4439708 . + 0 ID=cds3954;Parent=gene4054;Dbxref=Genbank:WP_002210052.1;Name=WP_002210052.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210052.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4439781 4440498 . + . ID=id838;gbkey=repeat_region NC_005810.1 RefSeq region 4439783 4440494 . - . ID=id839;gbkey=mobile_element NC_005810.1 RefSeq gene 4439891 4440349 . - . ID=gene4055;Name=YP_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20325;old_locus_tag=YP3905%2CYP_3905 NC_005810.1 Protein Homology CDS 4439891 4440349 . - 0 ID=cds3955;Parent=gene4055;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_005810.1 RefSeq gene 4440339 4440515 . - . ID=gene4056;Name=YP_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20330 NC_005810.1 Protein Homology CDS 4440339 4440515 . - 0 ID=cds3956;Parent=gene4056;Dbxref=Genbank:WP_025470774.1;Name=WP_025470774.1;gbkey=CDS;product=transposase;protein_id=WP_025470774.1;transl_table=11 NC_005810.1 RefSeq gene 4440754 4441929 . + . ID=gene4057;Name=YP_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20335;old_locus_tag=YP3906%2CYP_3906 NC_005810.1 Protein Homology CDS 4440754 4441929 . + 0 ID=cds3957;Parent=gene4057;Dbxref=Genbank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_002210051.1;transl_table=11 NC_005810.1 RefSeq gene 4442036 4443382 . - . ID=gene4058;Name=YP_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20340;old_locus_tag=YP3907%2CYP_3907 NC_005810.1 Protein Homology CDS 4442036 4443382 . - 0 ID=cds3958;Parent=gene4058;Dbxref=Genbank:WP_002210050.1;Name=WP_002210050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210050.1;transl_table=11 NC_005810.1 RefSeq gene 4443636 4444487 . + . ID=gene4059;Name=YP_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20345;old_locus_tag=YP3908%2CYP_3908 NC_005810.1 Protein Homology CDS 4443636 4444487 . + 0 ID=cds3959;Parent=gene4059;Dbxref=Genbank:WP_002228699.1;Name=WP_002228699.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_002228699.1;transl_table=11 NC_005810.1 RefSeq gene 4444677 4445282 . - . ID=gene4060;Name=YP_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20350;old_locus_tag=YP3909%2CYP_3909 NC_005810.1 Protein Homology CDS 4444677 4445282 . - 0 ID=cds3960;Parent=gene4060;Dbxref=Genbank:WP_002210048.1;Name=WP_002210048.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_002210048.1;transl_table=11 NC_005810.1 RefSeq gene 4445279 4446916 . - . ID=gene4061;Name=YP_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20355;old_locus_tag=YP3910%2CYP_3910 NC_005810.1 Protein Homology CDS 4445279 4446916 . - 0 ID=cds3961;Parent=gene4061;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11 NC_005810.1 RefSeq gene 4446935 4447888 . - . ID=gene4062;Name=YP_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20360;old_locus_tag=YP3911%2CYP_3911 NC_005810.1 Protein Homology CDS 4446935 4447888 . - 0 ID=cds3962;Parent=gene4062;Dbxref=Genbank:WP_002210046.1;Name=WP_002210046.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210046.1;transl_table=11 NC_005810.1 RefSeq gene 4447890 4448879 . - . ID=gene4063;Name=YP_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20365;old_locus_tag=YP3912%2CYP_3912 NC_005810.1 Protein Homology CDS 4447890 4448879 . - 0 ID=cds3963;Parent=gene4063;Dbxref=Genbank:WP_002210045.1;Name=WP_002210045.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NC_005810.1 RefSeq gene 4448872 4450368 . - . ID=gene4064;Name=YP_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20370;old_locus_tag=YP3913%2CYP_3913 NC_005810.1 Protein Homology CDS 4448872 4450368 . - 0 ID=cds3964;Parent=gene4064;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NC_005810.1 RefSeq gene 4450572 4451561 . - . ID=gene4065;Name=YP_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20375;old_locus_tag=YP3914%2CYP_3914 NC_005810.1 Protein Homology CDS 4450572 4451561 . - 0 ID=cds3965;Parent=gene4065;Dbxref=Genbank:WP_002210043.1;Name=WP_002210043.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210043.1;transl_table=11 NC_005810.1 RefSeq gene 4452355 4453275 . + . ID=gene4066;Name=YP_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20380;old_locus_tag=YP3915%2CYP_3915 NC_005810.1 Protein Homology CDS 4452355 4453275 . + 0 ID=cds3966;Parent=gene4066;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11 NC_005810.1 RefSeq gene 4453427 4454614 . + . ID=gene4067;Name=YP_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20385;old_locus_tag=YP3916%2CYP_3916 NC_005810.1 Protein Homology CDS 4453427 4454614 . + 0 ID=cds3967;Parent=gene4067;Dbxref=Genbank:WP_002210041.1;Name=WP_002210041.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210041.1;transl_table=11 NC_005810.1 RefSeq gene 4454832 4456481 . - . ID=gene4068;Name=YP_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20390;old_locus_tag=YP3917%2CYP_3917 NC_005810.1 Protein Homology CDS 4454832 4456481 . - 0 ID=cds3968;Parent=gene4068;Dbxref=Genbank:WP_002215816.1;Name=WP_002215816.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002215816.1;transl_table=11 NC_005810.1 RefSeq gene 4456830 4458185 . - . ID=gene4069;Name=YP_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20395;old_locus_tag=YP3918%2CYP_3918 NC_005810.1 Protein Homology CDS 4456830 4458185 . - 0 ID=cds3969;Parent=gene4069;Dbxref=Genbank:WP_002210039.1;Name=WP_002210039.1;gbkey=CDS;product=xanthine/uracil permease;protein_id=WP_002210039.1;transl_table=11 NC_005810.1 RefSeq gene 4458639 4458842 . + . ID=gene4070;Name=YP_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20400;old_locus_tag=YP3919%2CYP_3919 NC_005810.1 Protein Homology CDS 4458639 4458842 . + 0 ID=cds3970;Parent=gene4070;Dbxref=Genbank:WP_002210038.1;Name=WP_002210038.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_002210038.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4458920 4459087 . + . ID=id840;gbkey=repeat_region NC_005810.1 RefSeq gene 4459461 4460276 . - . ID=gene4071;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YP_RS20405;old_locus_tag=YP3920%2CYP_3920 NC_005810.1 Protein Homology CDS 4459461 4460276 . - 0 ID=cds3971;Parent=gene4071;Dbxref=Genbank:WP_002210036.1;Name=WP_002210036.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_002210036.1;transl_table=11 NC_005810.1 RefSeq gene 4460273 4461067 . - . ID=gene4072;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YP_RS20410;old_locus_tag=YP3921%2CYP_3921 NC_005810.1 Protein Homology CDS 4460273 4461067 . - 0 ID=cds3972;Parent=gene4072;Dbxref=Genbank:WP_002213853.1;Name=WP_002213853.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_002213853.1;transl_table=11 NC_005810.1 RefSeq gene 4461079 4462227 . - . ID=gene4073;Name=YP_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20415;old_locus_tag=YP3922%2CYP_3922 NC_005810.1 Protein Homology CDS 4461079 4462227 . - 0 ID=cds3973;Parent=gene4073;Dbxref=Genbank:WP_002210034.1;Name=WP_002210034.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_002210034.1;transl_table=11 NC_005810.1 RefSeq gene 4462246 4463368 . - . ID=gene4074;Name=YP_RS20420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS20420;old_locus_tag=YP3923;pseudo=true NC_005810.1 Protein Homology CDS 4462246 4463368 . - 0 ID=cds3974;Parent=gene4074;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NC_005810.1 RefSeq gene 4463383 4463964 . - . ID=gene4075;Name=YP_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20425;old_locus_tag=YP3924%2CYP_3924 NC_005810.1 Protein Homology CDS 4463383 4463964 . - 0 ID=cds3975;Parent=gene4075;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11 NC_005810.1 RefSeq gene 4464435 4465136 . + . ID=gene4076;Name=YP_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20430;old_locus_tag=YP3925%2CYP_3925 NC_005810.1 Protein Homology CDS 4464435 4465136 . + 0 ID=cds3976;Parent=gene4076;Dbxref=Genbank:WP_002210030.1;Name=WP_002210030.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002210030.1;transl_table=11 NC_005810.1 RefSeq gene 4465293 4466222 . + . ID=gene4077;Name=YP_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20435;old_locus_tag=YP3926%2CYP_3926 NC_005810.1 Protein Homology CDS 4465293 4466222 . + 0 ID=cds3977;Parent=gene4077;Dbxref=Genbank:WP_002210028.1;Name=WP_002210028.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002210028.1;transl_table=11 NC_005810.1 RefSeq gene 4466228 4466731 . + . ID=gene4078;Name=YP_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20440;old_locus_tag=YP3927%2CYP_3927 NC_005810.1 Protein Homology CDS 4466228 4466731 . + 0 ID=cds3978;Parent=gene4078;Dbxref=Genbank:WP_002210027.1;Name=WP_002210027.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_002210027.1;transl_table=11 NC_005810.1 RefSeq gene 4466893 4467759 . - . ID=gene4079;Name=YP_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20445;old_locus_tag=YP3928%2CYP_3928 NC_005810.1 Protein Homology CDS 4466893 4467759 . - 0 ID=cds3979;Parent=gene4079;Dbxref=Genbank:WP_002210026.1;Name=WP_002210026.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210026.1;transl_table=11 NC_005810.1 RefSeq gene 4468029 4469159 . + . ID=gene4080;Name=YP_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20450;old_locus_tag=YP3929%2CYP_3929 NC_005810.1 Protein Homology CDS 4468029 4469159 . + 0 ID=cds3980;Parent=gene4080;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11 NC_005810.1 RefSeq gene 4469156 4470055 . + . ID=gene4081;Name=YP_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20455;old_locus_tag=YP3930%2CYP_3930 NC_005810.1 Protein Homology CDS 4469156 4470055 . + 0 ID=cds3981;Parent=gene4081;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4470384 4471703 . + . ID=id841;gbkey=repeat_region NC_005810.1 RefSeq region 4470386 4471700 . + . ID=id842;gbkey=mobile_element NC_005810.1 RefSeq gene 4470457 4471665 . + . ID=gene4082;Name=YP_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20460;old_locus_tag=YP3931%2CYP_3931 NC_005810.1 Protein Homology CDS 4470457 4471665 . + 0 ID=cds3982;Parent=gene4082;Dbxref=Genbank:WP_011171979.1;Name=WP_011171979.1;gbkey=CDS;product=transposase;protein_id=WP_011171979.1;transl_table=11 NC_005810.1 RefSeq gene 4471725 4472519 . - . ID=gene4083;Name=YP_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20465;old_locus_tag=YP3932%2CYP_3932 NC_005810.1 Protein Homology CDS 4471725 4472519 . - 0 ID=cds3983;Parent=gene4083;Dbxref=Genbank:WP_002210023.1;Name=WP_002210023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210023.1;transl_table=11 NC_005810.1 RefSeq gene 4472528 4477063 . - . ID=gene4084;Name=YP_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20470;old_locus_tag=YP3933%2CYP_3933 NC_005810.1 Protein Homology CDS 4472528 4477063 . - 0 ID=cds3984;Parent=gene4084;Dbxref=Genbank:WP_016607350.1;Name=WP_016607350.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016607350.1;transl_table=11 NC_005810.1 RefSeq gene 4477108 4477530 . - . ID=gene4085;Name=YP_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20475;old_locus_tag=YP3934%2CYP_3934 NC_005810.1 Protein Homology CDS 4477108 4477530 . - 0 ID=cds3985;Parent=gene4085;Dbxref=Genbank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213861.1;transl_table=11 NC_005810.1 RefSeq gene 4477533 4479731 . - . ID=gene4086;Name=YP_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20480;old_locus_tag=YP3935%2CYP_3935 NC_005810.1 Protein Homology CDS 4477533 4479731 . - 0 ID=cds3986;Parent=gene4086;Dbxref=Genbank:WP_002210020.1;Name=WP_002210020.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002210020.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4477913 4479985 . + . ID=id843;gbkey=repeat_region NC_005810.1 RefSeq gene 4480092 4480499 . + . ID=gene4087;Name=YP_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20490;old_locus_tag=YP3937%2CYP_3937 NC_005810.1 Protein Homology CDS 4480092 4480499 . + 0 ID=cds3987;Parent=gene4087;Dbxref=Genbank:WP_002210018.1;Name=WP_002210018.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210018.1;transl_table=11 NC_005810.1 RefSeq gene 4480581 4480805 . + . ID=gene4088;Name=YP_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20495;old_locus_tag=YP3938%2CYP_3938 NC_005810.1 Protein Homology CDS 4480581 4480805 . + 0 ID=cds3988;Parent=gene4088;Dbxref=Genbank:WP_002213866.1;Name=WP_002213866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213866.1;transl_table=11 NC_005810.1 RefSeq gene 4480929 4481072 . + . ID=gene4089;Name=YP_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20500;old_locus_tag=YP3939 NC_005810.1 Protein Homology CDS 4480929 4481072 . + 0 ID=cds3989;Parent=gene4089;Dbxref=Genbank:WP_002210017.1;Name=WP_002210017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210017.1;transl_table=11 NC_005810.1 RefSeq gene 4481122 4481607 . - . ID=gene4090;Name=YP_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20505;old_locus_tag=YP3940%2CYP_3940 NC_005810.1 Protein Homology CDS 4481122 4481607 . - 0 ID=cds3990;Parent=gene4090;Dbxref=Genbank:WP_002213869.1;Name=WP_002213869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213869.1;transl_table=11 NC_005810.1 RefSeq gene 4481609 4482979 . - . ID=gene4091;Name=YP_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20510;old_locus_tag=YP3941%2CYP_3941 NC_005810.1 Protein Homology CDS 4481609 4482979 . - 0 ID=cds3991;Parent=gene4091;Dbxref=Genbank:WP_002213871.1;Name=WP_002213871.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002213871.1;transl_table=11 NC_005810.1 RefSeq gene 4483007 4485871 . - . ID=gene4092;Name=YP_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20515;old_locus_tag=YP3942%2CYP_3942 NC_005810.1 Protein Homology CDS 4483007 4485871 . - 0 ID=cds3992;Parent=gene4092;Dbxref=Genbank:WP_002213873.1;Name=WP_002213873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213873.1;transl_table=11 NC_005810.1 RefSeq gene 4485864 4486322 . - . ID=gene4093;Name=YP_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20520;old_locus_tag=YP3943%2CYP_3943 NC_005810.1 Protein Homology CDS 4485864 4486322 . - 0 ID=cds3993;Parent=gene4093;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11 NC_005810.1 RefSeq gene 4486328 4488730 . - . ID=gene4094;Name=YP_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20525;old_locus_tag=YP3944%2CYP_3944 NC_005810.1 Protein Homology CDS 4486328 4488730 . - 0 ID=cds3994;Parent=gene4094;Dbxref=Genbank:WP_002213876.1;Name=WP_002213876.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002213876.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4486732 4488463 . + . ID=id844;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4488487 4488984 . + . ID=id845;gbkey=repeat_region NC_005810.1 RefSeq gene 4488752 4489285 . - . ID=gene4095;Name=YP_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20530;old_locus_tag=YP3945%2CYP_3945 NC_005810.1 Protein Homology CDS 4488752 4489285 . - 0 ID=cds3995;Parent=gene4095;Dbxref=Genbank:WP_002213878.1;Name=WP_002213878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213878.1;transl_table=11 NC_005810.1 RefSeq gene 4489282 4490064 . - . ID=gene4096;Name=YP_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20535;old_locus_tag=YP3946%2CYP_3946 NC_005810.1 Protein Homology CDS 4489282 4490064 . - 0 ID=cds3996;Parent=gene4096;Dbxref=Genbank:WP_002213880.1;Name=WP_002213880.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213880.1;transl_table=11 NC_005810.1 RefSeq gene 4490189 4493722 . - . ID=gene4097;Name=YP_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20540;old_locus_tag=YP3947%2CYP_3947 NC_005810.1 Protein Homology CDS 4490189 4493722 . - 0 ID=cds3997;Parent=gene4097;Dbxref=Genbank:WP_002212111.1;Name=WP_002212111.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002212111.1;transl_table=11 NC_005810.1 RefSeq gene 4493754 4495142 . - . ID=gene4098;Name=YP_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20545;old_locus_tag=YP3948%2CYP_3948 NC_005810.1 Protein Homology CDS 4493754 4495142 . - 0 ID=cds3998;Parent=gene4098;Dbxref=Genbank:WP_002230500.1;Name=WP_002230500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230500.1;transl_table=11 NC_005810.1 RefSeq gene 4495148 4495834 . - . ID=gene4099;Name=YP_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20550;old_locus_tag=YP3949%2CYP_3949 NC_005810.1 Protein Homology CDS 4495148 4495834 . - 0 ID=cds3999;Parent=gene4099;Dbxref=Genbank:WP_002212109.1;Name=WP_002212109.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212109.1;transl_table=11 NC_005810.1 RefSeq gene 4495831 4496628 . - . ID=gene4100;Name=YP_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20555;old_locus_tag=YP3950%2CYP_3950 NC_005810.1 Protein Homology CDS 4495831 4496628 . - 0 ID=cds4000;Parent=gene4100;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11 NC_005810.1 RefSeq gene 4496625 4499228 . - . ID=gene4101;Name=YP_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20560;old_locus_tag=YP3951%2CYP_3951 NC_005810.1 Protein Homology CDS 4496625 4499228 . - 0 ID=cds4001;Parent=gene4101;Dbxref=Genbank:WP_002212107.1;Name=WP_002212107.1;gbkey=CDS;product=ATP-dependent Clp protease ClpV;protein_id=WP_002212107.1;transl_table=11 NC_005810.1 RefSeq gene 4499239 4499991 . - . ID=gene4102;Name=YP_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20565;old_locus_tag=YP3952%2CYP_3952 NC_005810.1 Protein Homology CDS 4499239 4499991 . - 0 ID=cds4002;Parent=gene4102;Dbxref=Genbank:WP_002355154.1;Name=WP_002355154.1;gbkey=CDS;product=chemotaxis protein MotB;protein_id=WP_002355154.1;transl_table=11 NC_005810.1 RefSeq gene 4500006 4501352 . - . ID=gene4103;Name=YP_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20570;old_locus_tag=YP3953%2CYP_3953 NC_005810.1 Protein Homology CDS 4500006 4501352 . - 0 ID=cds4003;Parent=gene4103;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11 NC_005810.1 RefSeq gene 4501355 4501900 . - . ID=gene4104;Name=YP_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20575;old_locus_tag=YP3954%2CYP_3954 NC_005810.1 Protein Homology CDS 4501355 4501900 . - 0 ID=cds4004;Parent=gene4104;Dbxref=Genbank:WP_002212104.1;Name=WP_002212104.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212104.1;transl_table=11 NC_005810.1 RefSeq gene 4501900 4503216 . - . ID=gene4105;Name=YP_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20580;old_locus_tag=YP3955%2CYP_3955 NC_005810.1 Protein Homology CDS 4501900 4503216 . - 0 ID=cds4005;Parent=gene4105;Dbxref=Genbank:WP_002212103.1;Name=WP_002212103.1;gbkey=CDS;product=phosphopeptide-binding protein;protein_id=WP_002212103.1;transl_table=11 NC_005810.1 RefSeq gene 4503342 4504430 . - . ID=gene4106;Name=YP_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20585;old_locus_tag=YP3956%2CYP_3956 NC_005810.1 Protein Homology CDS 4503342 4504430 . - 0 ID=cds4006;Parent=gene4106;Dbxref=Genbank:WP_002213885.1;Name=WP_002213885.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002213885.1;transl_table=11 NC_005810.1 RefSeq gene 4504394 4505137 . - . ID=gene4107;Name=YP_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20590;old_locus_tag=YP3957 NC_005810.1 Protein Homology CDS 4504394 4505137 . - 0 ID=cds4007;Parent=gene4107;Dbxref=Genbank:WP_002228704.1;Name=WP_002228704.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002228704.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4505132 4506789 . + . ID=id846;gbkey=repeat_region NC_005810.1 RefSeq region 4505134 4506573 . + . ID=id847;gbkey=mobile_element NC_005810.1 RefSeq gene 4505188 4505703 . + . ID=gene4108;Name=YP_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20595;old_locus_tag=YP3958%2CYP_3958 NC_005810.1 Protein Homology CDS 4505188 4505703 . + 0 ID=cds4008;Parent=gene4108;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_005810.1 RefSeq gene 4505757 4506542 . + . ID=gene4109;Name=YP_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20600;old_locus_tag=YP3959%2CYP_3959 NC_005810.1 Protein Homology CDS 4505757 4506542 . + 0 ID=cds4009;Parent=gene4109;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_005810.1 RefSeq gene 4507015 4508244 . + . ID=gene4110;Name=YP_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20605;old_locus_tag=YP3960%2CYP_3960 NC_005810.1 Protein Homology CDS 4507015 4508244 . + 0 ID=cds4010;Parent=gene4110;Dbxref=Genbank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_002215753.1;transl_table=11 NC_005810.1 RefSeq gene 4508393 4508596 . - . ID=gene4111;Name=YP_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20610 NC_005810.1 Protein Homology CDS 4508393 4508596 . - 0 ID=cds4011;Parent=gene4111;Dbxref=Genbank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11 NC_005810.1 RefSeq gene 4508717 4508875 . + . ID=gene4112;Name=YP_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20615;old_locus_tag=YP3961%2CYP_3961 NC_005810.1 Protein Homology CDS 4508717 4508875 . + 0 ID=cds4012;Parent=gene4112;Dbxref=Genbank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NC_005810.1 RefSeq gene 4508954 4509535 . + . ID=gene4113;Name=YP_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20620;old_locus_tag=YP3962%2CYP_3962 NC_005810.1 Protein Homology CDS 4508954 4509535 . + 0 ID=cds4013;Parent=gene4113;Dbxref=Genbank:WP_002215751.1;Name=WP_002215751.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215751.1;transl_table=11 NC_005810.1 RefSeq gene 4509549 4509881 . - . ID=gene4114;Name=YP_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20625;old_locus_tag=YP3963%2CYP_3963 NC_005810.1 Protein Homology CDS 4509549 4509881 . - 0 ID=cds4014;Parent=gene4114;Dbxref=Genbank:WP_002215750.1;Name=WP_002215750.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215750.1;transl_table=11 NC_005810.1 RefSeq gene 4510170 4510634 . + . ID=gene4115;Name=YP_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20630;old_locus_tag=YP3964 NC_005810.1 Protein Homology CDS 4510170 4510634 . + 0 ID=cds4015;Parent=gene4115;Dbxref=Genbank:WP_002209607.1;Name=WP_002209607.1;gbkey=CDS;product=transposase;protein_id=WP_002209607.1;transl_table=11 NC_005810.1 RefSeq gene 4510641 4512356 . - . ID=gene4116;Name=YP_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20635 NC_005810.1 Protein Homology CDS 4510641 4512356 . - 0 ID=cds4016;Parent=gene4116;Dbxref=Genbank:WP_002355624.1;Name=WP_002355624.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_002355624.1;transl_table=11 NC_005810.1 RefSeq gene 4512367 4512594 . - . ID=gene4117;Name=YP_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20640 NC_005810.1 GeneMarkS+ CDS 4512367 4512594 . - 0 ID=cds4017;Parent=gene4117;Dbxref=Genbank:WP_002355626.1;Name=WP_002355626.1;gbkey=CDS;product=elongation factor Tu GTP-binding domain protein;protein_id=WP_002355626.1;transl_table=11 NC_005810.1 RefSeq gene 4512591 4513979 . - . ID=gene4118;Name=YP_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20645;old_locus_tag=YP3966%2CYP_3966 NC_005810.1 Protein Homology CDS 4512591 4513979 . - 0 ID=cds4018;Parent=gene4118;Dbxref=Genbank:WP_002209608.1;Name=WP_002209608.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_002209608.1;transl_table=11 NC_005810.1 RefSeq gene 4514163 4515092 . - . ID=gene4119;Name=YP_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20650;old_locus_tag=YP3967%2CYP_3967 NC_005810.1 Protein Homology CDS 4514163 4515092 . - 0 ID=cds4019;Parent=gene4119;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11 NC_005810.1 RefSeq gene 4515092 4515766 . - . ID=gene4120;Name=YP_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20655;old_locus_tag=YP3968%2CYP_3968 NC_005810.1 Protein Homology CDS 4515092 4515766 . - 0 ID=cds4020;Parent=gene4120;Dbxref=Genbank:WP_002209610.1;Name=WP_002209610.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_002209610.1;transl_table=11 NC_005810.1 RefSeq gene 4515763 4516734 . - . ID=gene4121;Name=YP_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20660;old_locus_tag=YP3969%2CYP_3969 NC_005810.1 Protein Homology CDS 4515763 4516734 . - 0 ID=cds4021;Parent=gene4121;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11 NC_005810.1 RefSeq gene 4516747 4519158 . - . ID=gene4122;Name=YP_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20665;old_locus_tag=YP3970 NC_005810.1 Protein Homology CDS 4516747 4519158 . - 0 ID=cds4022;Parent=gene4122;Dbxref=Genbank:WP_002231683.1;Name=WP_002231683.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_002231683.1;transl_table=11 NC_005810.1 RefSeq gene 4519207 4519794 . - . ID=gene4123;Name=YP_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20670 NC_005810.1 Protein Homology CDS 4519207 4519794 . - 0 ID=cds4023;Parent=gene4123;Dbxref=Genbank:WP_002231685.1;Name=WP_002231685.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002231685.1;transl_table=11 NC_005810.1 RefSeq gene 4519991 4520815 . + . ID=gene4124;Name=YP_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20675;old_locus_tag=YP3971%2CYP_3971 NC_005810.1 Protein Homology CDS 4519991 4520815 . + 0 ID=cds4024;Parent=gene4124;Dbxref=Genbank:WP_002209612.1;Name=WP_002209612.1;gbkey=CDS;product=protein FdhD;protein_id=WP_002209612.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4520937 4520976 . + . ID=id848;Note=degenerate repeat region containing 2 copies of a 20bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4521251 4521874 . + . ID=gene4125;Name=YP_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20680;old_locus_tag=YP3972%2CYP_3972 NC_005810.1 Protein Homology CDS 4521251 4521874 . + 0 ID=cds4025;Parent=gene4125;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11 NC_005810.1 RefSeq gene 4522218 4524167 . + . ID=gene4126;Name=YP_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20685;old_locus_tag=YP3973%2CYP_3973 NC_005810.1 Protein Homology CDS 4522218 4524167 . + 0 ID=cds4026;Parent=gene4126;Dbxref=Genbank:WP_002209615.1;Name=WP_002209615.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209615.1;transl_table=11 NC_005810.1 RefSeq gene 4524357 4524689 . + . ID=gene4127;Name=YP_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20690;old_locus_tag=YP3974%2CYP_3974 NC_005810.1 Protein Homology CDS 4524357 4524689 . + 0 ID=cds4027;Parent=gene4127;Dbxref=Genbank:WP_002217114.1;Name=WP_002217114.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217114.1;transl_table=11 NC_005810.1 RefSeq gene 4525221 4525697 . + . ID=gene4128;Name=YP_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20695;old_locus_tag=YP3975%2CYP_3975 NC_005810.1 Protein Homology CDS 4525221 4525697 . + 0 ID=cds4028;Parent=gene4128;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11 NC_005810.1 RefSeq gene 4525866 4526222 . - . ID=gene4129;Name=YP_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20700;old_locus_tag=YP3976 NC_005810.1 Protein Homology CDS 4525866 4526222 . - 0 ID=cds4029;Parent=gene4129;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11 NC_005810.1 RefSeq gene 4526471 4527025 . - . ID=gene4130;Name=YP_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20705;old_locus_tag=YP3977%2CYP_3977 NC_005810.1 Protein Homology CDS 4526471 4527025 . - 0 ID=cds4030;Parent=gene4130;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11 NC_005810.1 RefSeq gene 4527232 4528395 . - . ID=gene4131;Name=YP_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20710;old_locus_tag=YP3978%2CYP_3978 NC_005810.1 Protein Homology CDS 4527232 4528395 . - 0 ID=cds4031;Parent=gene4131;Dbxref=Genbank:WP_002209620.1;Name=WP_002209620.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_002209620.1;transl_table=11 NC_005810.1 RefSeq gene 4528532 4530463 . - . ID=gene4132;Name=YP_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20715;old_locus_tag=YP3979%2CYP_3979 NC_005810.1 Protein Homology CDS 4528532 4530463 . - 0 ID=cds4032;Parent=gene4132;Dbxref=Genbank:WP_002209621.1;Name=WP_002209621.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannitol transporter subunit IIABC;protein_id=WP_002209621.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4530905 4531079 . + . ID=id849;gbkey=repeat_region NC_005810.1 RefSeq gene 4531113 4531832 . - . ID=gene4133;Name=YP_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20720;old_locus_tag=YP3980%2CYP_3980 NC_005810.1 Protein Homology CDS 4531113 4531832 . - 0 ID=cds4033;Parent=gene4133;Dbxref=Genbank:WP_002209622.1;Name=WP_002209622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209622.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4531908 4531939 . + . ID=id850;Note=degenerate repeat region containing 2 copies of a 16bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4532084 4532258 . + . ID=id851;gbkey=repeat_region NC_005810.1 RefSeq gene 4532305 4534374 . - . ID=gene4134;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YP_RS20725;old_locus_tag=YP3981%2CYP_3981 NC_005810.1 Protein Homology CDS 4532305 4534374 . - 0 ID=cds4034;Parent=gene4134;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NC_005810.1 RefSeq gene 4534384 4535298 . - . ID=gene4135;Name=YP_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20730;old_locus_tag=YP3982%2CYP_3982 NC_005810.1 Protein Homology CDS 4534384 4535298 . - 0 ID=cds4035;Parent=gene4135;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NC_005810.1 RefSeq gene 4535626 4536198 . + . ID=gene4136;Name=YP_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20735;old_locus_tag=YP3984%2CYP_3984 NC_005810.1 Protein Homology CDS 4535626 4536198 . + 0 ID=cds4036;Parent=gene4136;Dbxref=Genbank:WP_002209626.1;Name=WP_002209626.1;gbkey=CDS;product=DNA-3-methyladenine glycosylase;protein_id=WP_002209626.1;transl_table=11 NC_005810.1 RefSeq gene 4536195 4536650 . + . ID=gene4137;Name=YP_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20740;old_locus_tag=YP3985%2CYP_3985 NC_005810.1 Protein Homology CDS 4536195 4536650 . + 0 ID=cds4037;Parent=gene4137;Dbxref=Genbank:WP_002209627.1;Name=WP_002209627.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209627.1;transl_table=11 NC_005810.1 RefSeq gene 4537008 4537667 . + . ID=gene4138;Name=YP_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20745;old_locus_tag=YP3986%2CYP_3986 NC_005810.1 Protein Homology CDS 4537008 4537667 . + 0 ID=cds4038;Parent=gene4138;Dbxref=Genbank:WP_002209628.1;Name=WP_002209628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209628.1;transl_table=11 NC_005810.1 RefSeq gene 4537798 4538442 . - . ID=gene4139;Name=YP_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20750;old_locus_tag=YP3987%2CYP_3987 NC_005810.1 Protein Homology CDS 4537798 4538442 . - 0 ID=cds4039;Parent=gene4139;Dbxref=Genbank:WP_002209629.1;Name=WP_002209629.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209629.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4538490 4538525 . + . ID=id852;Note=degenerate repeat region containing 2 copies of a 18bp unit;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4538806 4538839 . + . ID=id853;Note=degenerate repeat region containing 2 copies of a 17bp unit;gbkey=repeat_region NC_005810.1 RefSeq gene 4538961 4539941 . + . ID=gene4140;Name=YP_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20755;old_locus_tag=YP3988%2CYP_3988 NC_005810.1 Protein Homology CDS 4538961 4539941 . + 0 ID=cds4040;Parent=gene4140;Dbxref=Genbank:WP_002209630.1;Name=WP_002209630.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_002209630.1;transl_table=11 NC_005810.1 RefSeq gene 4540211 4542274 . + . ID=gene4141;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YP_RS20760;old_locus_tag=YP3989%2CYP_3989 NC_005810.1 Protein Homology CDS 4540211 4542274 . + 0 ID=cds4041;Parent=gene4141;Dbxref=Genbank:WP_011171983.1;Name=WP_011171983.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_011171983.1;transl_table=11 NC_005810.1 RefSeq gene 4542689 4543132 . + . ID=gene4142;Name=YP_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20765;old_locus_tag=YP3990%2CYP_3990 NC_005810.1 Protein Homology CDS 4542689 4543132 . + 0 ID=cds4042;Parent=gene4142;Dbxref=Genbank:WP_002209632.1;Name=WP_002209632.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209632.1;transl_table=11 NC_005810.1 RefSeq gene 4543587 4544852 . + . ID=gene4143;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YP_RS20770;old_locus_tag=YP3991%2CYP_3991 NC_005810.1 Protein Homology CDS 4543587 4544852 . + 0 ID=cds4043;Parent=gene4143;Dbxref=Genbank:WP_002228155.1;Name=WP_002228155.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_002228155.1;transl_table=11 NC_005810.1 RefSeq gene 4544965 4546623 . - . ID=gene4144;Name=YP_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20775;old_locus_tag=YP3992%2CYP_3992 NC_005810.1 Protein Homology CDS 4544965 4546623 . - 0 ID=cds4044;Parent=gene4144;Dbxref=Genbank:WP_002209634.1;Name=WP_002209634.1;gbkey=CDS;product=transporter;protein_id=WP_002209634.1;transl_table=11 NC_005810.1 RefSeq gene 4546996 4547460 . - . ID=gene4145;Name=YP_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20780;old_locus_tag=YP3993%2CYP_3993 NC_005810.1 Protein Homology CDS 4546996 4547460 . - 0 ID=cds4045;Parent=gene4145;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11 NC_005810.1 RefSeq gene 4547741 4548154 . - . ID=gene4146;Name=YP_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20785;old_locus_tag=YP3994%2CYP_3994 NC_005810.1 Protein Homology CDS 4547741 4548154 . - 0 ID=cds4046;Parent=gene4146;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11 NC_005810.1 RefSeq gene 4548522 4548860 . + . ID=gene4147;Name=YP_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20790;old_locus_tag=YP3995%2CYP_3995 NC_005810.1 Protein Homology CDS 4548522 4548860 . + 0 ID=cds4047;Parent=gene4147;Dbxref=Genbank:WP_002209637.1;Name=WP_002209637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209637.1;transl_table=11 NC_005810.1 RefSeq gene 4548900 4549214 . - . ID=gene4148;Name=YP_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20795 NC_005810.1 Protein Homology CDS 4548900 4549214 . - 0 ID=cds4048;Parent=gene4148;Dbxref=Genbank:WP_002228733.1;Name=WP_002228733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228733.1;transl_table=11 NC_005810.1 RefSeq gene 4549204 4549515 . - . ID=gene4149;Name=YP_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20800 NC_005810.1 Protein Homology CDS 4549204 4549515 . - 0 ID=cds4049;Parent=gene4149;Dbxref=Genbank:WP_002228734.1;Name=WP_002228734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228734.1;transl_table=11 NC_005810.1 RefSeq gene 4549723 4550685 . + . ID=gene4150;Name=YP_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20805;old_locus_tag=YP3997%2CYP_3997 NC_005810.1 Protein Homology CDS 4549723 4550685 . + 0 ID=cds4050;Parent=gene4150;Dbxref=Genbank:WP_002209638.1;Name=WP_002209638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209638.1;transl_table=11 NC_005810.1 RefSeq gene 4550679 4551632 . + . ID=gene4151;Name=YP_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20810;old_locus_tag=YP3998%2CYP_3998 NC_005810.1 Protein Homology CDS 4550679 4551632 . + 0 ID=cds4051;Parent=gene4151;Dbxref=Genbank:WP_002209639.1;Name=WP_002209639.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_002209639.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4551673 4551736 . + . ID=id854;gbkey=repeat_region NC_005810.1 RefSeq repeat_region 4551703 4553499 . + . ID=id855;gbkey=repeat_region NC_005810.1 RefSeq gene 4551718 4552386 . + . ID=gene4152;Name=YP_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20815;old_locus_tag=YP3999 NC_005810.1 Protein Homology CDS 4551718 4552386 . + 0 ID=cds4052;Parent=gene4152;Dbxref=Genbank:WP_002228735.1;Name=WP_002228735.1;gbkey=CDS;product=transposase;protein_id=WP_002228735.1;transl_table=11 NC_005810.1 RefSeq region 4551817 4553256 . + . ID=id856;gbkey=mobile_element NC_005810.1 RefSeq gene 4552440 4553225 . + . ID=gene4153;Name=YP_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20820;old_locus_tag=YP4000%2CYP_4000 NC_005810.1 Protein Homology CDS 4552440 4553225 . + 0 ID=cds4053;Parent=gene4153;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_005810.1 RefSeq gene 4553616 4554425 . - . ID=gene4154;Name=YP_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20825;old_locus_tag=YP4001%2CYP_4001 NC_005810.1 Protein Homology CDS 4553616 4554425 . - 0 ID=cds4054;Parent=gene4154;Dbxref=Genbank:WP_002209641.1;Name=WP_002209641.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_002209641.1;transl_table=11 NC_005810.1 RefSeq gene 4554641 4557055 . - . ID=gene4155;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YP_RS20830;old_locus_tag=YP4002%2CYP_4002 NC_005810.1 Protein Homology CDS 4554641 4557055 . - 0 ID=cds4055;Parent=gene4155;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11 NC_005810.1 RefSeq gene 4557075 4558160 . - . ID=gene4156;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YP_RS20835;old_locus_tag=YP4003%2CYP_4003 NC_005810.1 Protein Homology CDS 4557075 4558160 . - 0 ID=cds4056;Parent=gene4156;Dbxref=Genbank:WP_002209643.1;Name=WP_002209643.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_002209643.1;transl_table=11 NC_005810.1 RefSeq gene 4558159 4558329 . + . ID=gene4157;Name=YP_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20840 NC_005810.1 Protein Homology CDS 4558159 4558329 . + 0 ID=cds4057;Parent=gene4157;Dbxref=Genbank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;product=recombinase F;protein_id=WP_002218418.1;transl_table=11 NC_005810.1 RefSeq gene 4558333 4559433 . - . ID=gene4158;Name=YP_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20845;old_locus_tag=YP4004%2CYP_4004 NC_005810.1 Protein Homology CDS 4558333 4559433 . - 0 ID=cds4058;Parent=gene4158;Dbxref=Genbank:WP_002209645.1;Name=WP_002209645.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11 NC_005810.1 RefSeq gene 4559438 4560826 . - . ID=gene4159;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YP_RS20850;old_locus_tag=YP4005%2CYP_4005 NC_005810.1 Protein Homology CDS 4559438 4560826 . - 0 ID=cds4059;Parent=gene4159;Dbxref=Genbank:WP_002220732.1;Name=WP_002220732.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 NC_005810.1 RefSeq gene 4561536 4561676 . + . ID=gene4160;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YP_RS20855;old_locus_tag=YP4007%2CYP_4007 NC_005810.1 Protein Homology CDS 4561536 4561676 . + 0 ID=cds4060;Parent=gene4160;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 NC_005810.1 RefSeq gene 4561695 4562054 . + . ID=gene4161;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YP_RS20860;old_locus_tag=YP4008%2CYP_4008 NC_005810.1 Protein Homology CDS 4561695 4562054 . + 0 ID=cds4061;Parent=gene4161;Dbxref=Genbank:WP_002228153.1;Name=WP_002228153.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NC_005810.1 RefSeq gene 4562278 4563918 . + . ID=gene4162;Name=YP_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20865;old_locus_tag=YP4009%2CYP_4009 NC_005810.1 Protein Homology CDS 4562278 4563918 . + 0 ID=cds4062;Parent=gene4162;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11 NC_005810.1 RefSeq gene 4564061 4565425 . + . ID=gene4163;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=YP_RS20870;old_locus_tag=YP4010%2CYP_4010 NC_005810.1 Protein Homology CDS 4564061 4565425 . + 0 ID=cds4063;Parent=gene4163;Dbxref=Genbank:WP_002220740.1;Name=WP_002220740.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_002220740.1;transl_table=11 NC_005810.1 RefSeq gene 4565611 4566810 . + . ID=gene4164;Name=YP_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20875;old_locus_tag=YP4011%2CYP_4011 NC_005810.1 Protein Homology CDS 4565611 4566810 . + 0 ID=cds4064;Parent=gene4164;Dbxref=Genbank:WP_011171985.1;Name=WP_011171985.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_011171985.1;transl_table=11 NC_005810.1 RefSeq gene 4567278 4567559 . - . ID=gene4165;Name=YP_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20880;old_locus_tag=YP4012%2CYP_4012 NC_005810.1 Protein Homology CDS 4567278 4567559 . - 0 ID=cds4065;Parent=gene4165;Dbxref=Genbank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215583.1;transl_table=11 NC_005810.1 RefSeq gene 4567621 4568241 . - . ID=gene4166;Name=YP_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20885;old_locus_tag=YP4013%2CYP_4013 NC_005810.1 Protein Homology CDS 4567621 4568241 . - 0 ID=cds4066;Parent=gene4166;Dbxref=Genbank:WP_002215581.1;Name=WP_002215581.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215581.1;transl_table=11 NC_005810.1 RefSeq gene 4568786 4570114 . - . ID=gene4167;Name=YP_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20890;old_locus_tag=YP4014%2CYP_4014 NC_005810.1 Protein Homology CDS 4568786 4570114 . - 0 ID=cds4067;Parent=gene4167;Dbxref=Genbank:WP_002215577.1;Name=WP_002215577.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_002215577.1;transl_table=11 NC_005810.1 RefSeq repeat_region 4570333 4570505 . + . ID=id857;gbkey=repeat_region NC_005810.1 RefSeq gene 4570607 4571275 . + . ID=gene4168;Name=YP_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20895;old_locus_tag=YP4015%2CYP_4015 NC_005810.1 Protein Homology CDS 4570607 4571275 . + 0 ID=cds4068;Parent=gene4168;Dbxref=Genbank:WP_002215575.1;Name=WP_002215575.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_002215575.1;transl_table=11 NC_005810.1 RefSeq gene 4571310 4572065 . - . ID=gene4169;Name=YP_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20900;old_locus_tag=YP4016%2CYP_4016 NC_005810.1 Protein Homology CDS 4571310 4572065 . - 0 ID=cds4069;Parent=gene4169;Dbxref=Genbank:WP_002215573.1;Name=WP_002215573.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215573.1;transl_table=11 NC_005810.1 RefSeq gene 4572067 4572804 . - . ID=gene4170;Name=YP_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20905;old_locus_tag=YP4017%2CYP_4017 NC_005810.1 Protein Homology CDS 4572067 4572804 . - 0 ID=cds4070;Parent=gene4170;Dbxref=Genbank:WP_002215571.1;Name=WP_002215571.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215571.1;transl_table=11 NC_005810.1 RefSeq gene 4572987 4573841 . - . ID=gene4171;Name=YP_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20910;old_locus_tag=YP4018%2CYP_4018 NC_005810.1 Protein Homology CDS 4572987 4573841 . - 0 ID=cds4071;Parent=gene4171;Dbxref=Genbank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11 NC_005810.1 RefSeq gene 4574061 4574732 . - . ID=gene4172;Name=YP_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20915;old_locus_tag=YP4019%2CYP_4019 NC_005810.1 Protein Homology CDS 4574061 4574732 . - 0 ID=cds4072;Parent=gene4172;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11 NC_005810.1 RefSeq gene 4575028 4575750 . - . ID=gene4173;Name=YP_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20920;old_locus_tag=YP4020%2CYP_4020 NC_005810.1 Protein Homology CDS 4575028 4575750 . - 0 ID=cds4073;Parent=gene4173;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11 NC_005810.1 RefSeq gene 4575838 4576614 . - . ID=gene4174;Name=YP_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20925;old_locus_tag=YP4021%2CYP_4021 NC_005810.1 Protein Homology CDS 4575838 4576614 . - 0 ID=cds4074;Parent=gene4174;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11 NC_005810.1 RefSeq gene 4576695 4577582 . - . ID=gene4175;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YP_RS20930;old_locus_tag=YP4022%2CYP_4022 NC_005810.1 Protein Homology CDS 4576695 4577582 . - 0 ID=cds4075;Parent=gene4175;Dbxref=Genbank:WP_002215560.1;Name=WP_002215560.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_002215560.1;transl_table=11 NC_005810.1 RefSeq gene 4577584 4578531 . - . ID=gene4176;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YP_RS20935;old_locus_tag=YP4023%2CYP_4023 NC_005810.1 Protein Homology CDS 4577584 4578531 . - 0 ID=cds4076;Parent=gene4176;Dbxref=Genbank:WP_002231143.1;Name=WP_002231143.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002231143.1;transl_table=11 NC_005810.1 RefSeq gene 4578760 4579800 . - . ID=gene4177;Name=YP_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20940;old_locus_tag=YP4024%2CYP_4024 NC_005810.1 Protein Homology CDS 4578760 4579800 . - 0 ID=cds4077;Parent=gene4177;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11 NC_005810.1 RefSeq gene 4580283 4582112 . - . ID=gene4178;Name=YP_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20945;old_locus_tag=YP4025%2CYP_4025 NC_005810.1 Protein Homology CDS 4580283 4582112 . - 0 ID=cds4078;Parent=gene4178;Dbxref=Genbank:WP_002215552.1;Name=WP_002215552.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_002215552.1;transl_table=11 NC_005810.1 RefSeq gene 4582313 4583683 . - . ID=gene4179;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YP_RS20950;old_locus_tag=YP4026%2CYP_4026 NC_005810.1 Protein Homology CDS 4582313 4583683 . - 0 ID=cds4079;Parent=gene4179;Dbxref=Genbank:WP_002215550.1;Name=WP_002215550.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_002215550.1;transl_table=11 NC_005810.1 RefSeq gene 4584304 4584726 . - . ID=gene4180;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=YP_RS20955;old_locus_tag=YP4027%2CYP_4027 NC_005810.1 Protein Homology CDS 4584304 4584726 . - 0 ID=cds4080;Parent=gene4180;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11 NC_005810.1 RefSeq gene 4584748 4586130 . - . ID=gene4181;Name=YP_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20960;old_locus_tag=YP4028%2CYP_4028 NC_005810.1 Protein Homology CDS 4584748 4586130 . - 0 ID=cds4081;Parent=gene4181;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NC_005810.1 RefSeq gene 4586286 4587149 . - . ID=gene4182;Name=YP_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20965;old_locus_tag=YP4029%2CYP_4029 NC_005810.1 Protein Homology CDS 4586286 4587149 . - 0 ID=cds4082;Parent=gene4182;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NC_005810.1 RefSeq gene 4587211 4588752 . - . ID=gene4183;Name=YP_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20970;old_locus_tag=YP4030%2CYP_4030 NC_005810.1 Protein Homology CDS 4587211 4588752 . - 0 ID=cds4083;Parent=gene4183;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NC_005810.1 RefSeq gene 4588767 4589300 . - . ID=gene4184;Name=YP_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20975;old_locus_tag=YP4031%2CYP_4031 NC_005810.1 Protein Homology CDS 4588767 4589300 . - 0 ID=cds4084;Parent=gene4184;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NC_005810.1 RefSeq gene 4589315 4589785 . - . ID=gene4185;Name=YP_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20980;old_locus_tag=YP4032%2CYP_4032 NC_005810.1 Protein Homology CDS 4589315 4589785 . - 0 ID=cds4085;Parent=gene4185;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11 NC_005810.1 RefSeq gene 4589847 4590086 . - . ID=gene4186;Name=YP_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20985;old_locus_tag=YP4033%2CYP_4033 NC_005810.1 Protein Homology CDS 4589847 4590086 . - 0 ID=cds4086;Parent=gene4186;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NC_005810.1 RefSeq gene 4590136 4590960 . - . ID=gene4187;Name=YP_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20990;old_locus_tag=YP4034%2CYP_4034 NC_005810.1 Protein Homology CDS 4590136 4590960 . - 0 ID=cds4087;Parent=gene4187;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11 NC_005810.1 RefSeq gene 4591000 4591383 . - . ID=gene4188;Name=YP_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS20995;old_locus_tag=YP4035%2CYP_4035 NC_005810.1 Protein Homology CDS 4591000 4591383 . - 0 ID=cds4088;Parent=gene4188;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NC_005810.1 RefSeq gene 4592050 4592670 . - . ID=gene4189;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YP_RS21000;old_locus_tag=YP4036%2CYP_4036 NC_005810.1 Protein Homology CDS 4592050 4592670 . - 0 ID=cds4089;Parent=gene4189;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11 NC_005810.1 RefSeq gene 4592816 4594705 . - . ID=gene4190;Name=YP_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21005;old_locus_tag=YP4037%2CYP_4037 NC_005810.1 Protein Homology CDS 4592816 4594705 . - 0 ID=cds4090;Parent=gene4190;Dbxref=Genbank:WP_002212259.1;Name=WP_002212259.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 ##sequence-region NC_005813.1 1 70159 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=229193 NC_005813.1 RefSeq region 1 70159 . + . ID=id858;Dbxref=taxon:229193;Is_circular=true;Name=pCD1;biovar=Microtus;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pCD1;strain=91001;sub-species=microtus NC_005813.1 RefSeq region 1 1954 . + . ID=id859;gbkey=mobile_element NC_005813.1 RefSeq gene 87 1109 . + . ID=gene4191;Name=YP_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21015;old_locus_tag=pCD01%2CYP_pCD01 NC_005813.1 Protein Homology CDS 87 1109 . + 0 ID=cds4091;Parent=gene4191;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005813.1 RefSeq gene 1109 1888 . + . ID=gene4192;Name=YP_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21020;old_locus_tag=pCD02%2CYP_pCD02 NC_005813.1 Protein Homology CDS 1109 1888 . + 0 ID=cds4092;Parent=gene4192;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005813.1 RefSeq repeat_region 1955 2772 . + . ID=id860;gbkey=repeat_region NC_005813.1 RefSeq gene 1959 2357 . + . ID=gene4193;Name=YP_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21025;old_locus_tag=pCD03%2CYP_pCD03 NC_005813.1 Protein Homology CDS 1959 2357 . + 0 ID=cds4093;Parent=gene4193;Dbxref=Genbank:WP_011171988.1;Name=WP_011171988.1;gbkey=CDS;product=transposase;protein_id=WP_011171988.1;transl_table=11 NC_005813.1 RefSeq gene 2774 3022 . + . ID=gene4194;Name=YP_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21030;old_locus_tag=pCD05 NC_005813.1 Protein Homology CDS 2774 3022 . + 0 ID=cds4094;Parent=gene4194;Dbxref=Genbank:WP_002233137.1;Name=WP_002233137.1;gbkey=CDS;product=phospholipase;protein_id=WP_002233137.1;transl_table=11 NC_005813.1 RefSeq gene 3160 3414 . + . ID=gene4195;Name=YP_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21035;old_locus_tag=pCD06%2CYP_pCD06 NC_005813.1 Protein Homology CDS 3160 3414 . + 0 ID=cds4095;Parent=gene4195;Dbxref=Genbank:WP_002229817.1;Name=WP_002229817.1;gbkey=CDS;product=replication protein;protein_id=WP_002229817.1;transl_table=11 NC_005813.1 RefSeq gene 3656 3730 . + . ID=gene4196;Name=YP_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21040;old_locus_tag=pCD07%2CYP_pCD07 NC_005813.1 Protein Homology CDS 3656 3730 . + 0 ID=cds4096;Parent=gene4196;Dbxref=Genbank:WP_002233140.1;Name=WP_002233140.1;Note=acts to regulate the expression of the plasmid replication protein RepA in the IncFII plasmid group;gbkey=CDS;product=RepA leader peptide Tap-containing protein;protein_id=WP_002233140.1;transl_table=11 NC_005813.1 RefSeq gene 3723 4589 . + . ID=gene4197;Name=YP_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21045;old_locus_tag=pCD08%2CYP_pCD08 NC_005813.1 Protein Homology CDS 3723 4589 . + 0 ID=cds4097;Parent=gene4197;Dbxref=Genbank:WP_002225475.1;Name=WP_002225475.1;gbkey=CDS;product=replication protein;protein_id=WP_002225475.1;transl_table=11 NC_005813.1 RefSeq region 4760 4910 . + . ID=id861;Note=oriR%3B similar to Yersinia pestis CO92 pCD plasmid OriR (AL117189);gbkey=rep_origin NC_005813.1 RefSeq repeat_region 6176 6509 . + . ID=id862;gbkey=repeat_region NC_005813.1 RefSeq gene 6257 6451 . + . ID=gene4198;Name=YP_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21050 NC_005813.1 Protein Homology CDS 6257 6451 . + 0 ID=cds4098;Parent=gene4198;Dbxref=Genbank:WP_011191370.1;Name=WP_011191370.1;gbkey=CDS;product=transposase;protein_id=WP_011191370.1;transl_table=11 NC_005813.1 RefSeq gene 6747 7196 . + . ID=gene4199;Name=YP_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21055;old_locus_tag=pCD12%2CYP_pCD12 NC_005813.1 Protein Homology CDS 6747 7196 . + 0 ID=cds4099;Parent=gene4199;Dbxref=Genbank:WP_002229809.1;Name=WP_002229809.1;gbkey=CDS;product=molecular chaperone Tir;protein_id=WP_002229809.1;transl_table=11 NC_005813.1 RefSeq gene 7204 9402 . + . ID=gene4200;Name=YP_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21060;old_locus_tag=pCD13%2CYP_pCD13 NC_005813.1 Protein Homology CDS 7204 9402 . + 0 ID=cds4100;Parent=gene4200;Dbxref=Genbank:WP_002213290.1;Name=WP_002213290.1;gbkey=CDS;product=protein kinase YpkA;protein_id=WP_002213290.1;transl_table=11 NC_005813.1 RefSeq gene 9798 10664 . + . ID=gene4201;Name=YP_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21065;old_locus_tag=pCD14%2CYP_pCD14 NC_005813.1 Protein Homology CDS 9798 10664 . + 0 ID=cds4101;Parent=gene4201;Dbxref=Genbank:WP_002225474.1;Name=WP_002225474.1;gbkey=CDS;product=effector protein YopJ;protein_id=WP_002225474.1;transl_table=11 NC_005813.1 RefSeq repeat_region 11218 11829 . + . ID=id863;gbkey=repeat_region NC_005813.1 RefSeq gene 11250 11726 . - . ID=gene4202;Name=YP_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21070;old_locus_tag=pCD15%2CYP_pCD15 NC_005813.1 Protein Homology CDS 11250 11726 . - 0 ID=cds4102;Parent=gene4202;Dbxref=Genbank:WP_002213284.1;Name=WP_002213284.1;gbkey=CDS;product=integrase;protein_id=WP_002213284.1;transl_table=11 NC_005813.1 RefSeq gene 11858 12064 . + . ID=gene4203;Name=YP_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21075;old_locus_tag=pCD16%2CYP_pCD16 NC_005813.1 Protein Homology CDS 11858 12064 . + 0 ID=cds4103;Parent=gene4203;Dbxref=Genbank:WP_002213282.1;Name=WP_002213282.1;gbkey=CDS;product=transposase;protein_id=WP_002213282.1;transl_table=11 NC_005813.1 RefSeq gene 12347 13753 . + . ID=gene4204;Name=YP_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21080;old_locus_tag=pCD17%2CYP_pCD17 NC_005813.1 Protein Homology CDS 12347 13753 . + 0 ID=cds4104;Parent=gene4204;Dbxref=Genbank:WP_002213278.1;Name=WP_002213278.1;gbkey=CDS;product=tyrosine-protein phosphatase YopH;protein_id=WP_002213278.1;transl_table=11 NC_005813.1 RefSeq region 13939 14243 . + . ID=id864;Note=partial elment;gbkey=mobile_element NC_005813.1 RefSeq gene 14265 14552 . - . ID=gene4205;Name=YP_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21085;old_locus_tag=pCD18%2CYP_pCD18 NC_005813.1 Protein Homology CDS 14265 14552 . - 0 ID=cds4105;Parent=gene4205;Dbxref=Genbank:WP_002356326.1;Name=WP_002356326.1;gbkey=CDS;product=integrase;protein_id=WP_002356326.1;transl_table=11 NC_005813.1 RefSeq gene 14570 14992 . - . ID=gene4206;Name=YP_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21090;old_locus_tag=pCD19%2CYP_pCD19 NC_005813.1 Protein Homology CDS 14570 14992 . - 0 ID=cds4106;Parent=gene4206;Dbxref=Genbank:WP_002229803.1;Name=WP_002229803.1;gbkey=CDS;product=low calcium response locus protein T;protein_id=WP_002229803.1;transl_table=11 NC_005813.1 RefSeq gene 15028 15294 . - . ID=gene4207;Name=YP_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21095;old_locus_tag=pCD20%2CYP_pCD20 NC_005813.1 Protein Homology CDS 15028 15294 . - 0 ID=cds4107;Parent=gene4207;Dbxref=Genbank:WP_002212900.1;Name=WP_002212900.1;gbkey=CDS;product=low calcium response locus protein S;protein_id=WP_002212900.1;transl_table=11 NC_005813.1 RefSeq gene 15842 16189 . - . ID=gene4208;Name=YP_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21100;old_locus_tag=pCD21%2CYP_pCD21 NC_005813.1 Protein Homology CDS 15842 16189 . - 0 ID=cds4108;Parent=gene4208;Dbxref=Genbank:WP_002212907.1;Name=WP_002212907.1;gbkey=CDS;product=translocation protein YopM;protein_id=WP_002212907.1;transl_table=11 NC_005813.1 RefSeq gene 16414 17046 . - . ID=gene4209;Name=YP_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21105;old_locus_tag=pCD22%2CYP_pCD22 NC_005813.1 Protein Homology CDS 16414 17046 . - 0 ID=cds4109;Parent=gene4209;Dbxref=Genbank:WP_002212909.1;Name=WP_002212909.1;gbkey=CDS;product=type III secretion system protein;protein_id=WP_002212909.1;transl_table=11 NC_005813.1 RefSeq gene 17025 17651 . - . ID=gene4210;Name=YP_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21110;old_locus_tag=pCD23%2CYP_pCD23 NC_005813.1 Protein Homology CDS 17025 17651 . - 0 ID=cds4110;Parent=gene4210;Dbxref=Genbank:WP_002212911.1;Name=WP_002212911.1;gbkey=CDS;product=preprotein translocase K;protein_id=WP_002212911.1;transl_table=11 NC_005813.1 RefSeq gene 17654 18388 . - . ID=gene4211;Name=YP_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21115;old_locus_tag=pCD24%2CYP_pCD24 NC_005813.1 Protein Homology CDS 17654 18388 . - 0 ID=cds4111;Parent=gene4211;Dbxref=Genbank:WP_002212912.1;Name=WP_002212912.1;gbkey=CDS;product=translocation protein YopJ;protein_id=WP_002212912.1;transl_table=11 NC_005813.1 RefSeq gene 18395 18733 . - . ID=gene4212;Name=YP_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21120;old_locus_tag=pCD25%2CYP_pCD25 NC_005813.1 Protein Homology CDS 18395 18733 . - 0 ID=cds4112;Parent=gene4212;Dbxref=Genbank:WP_032465675.1;Name=WP_032465675.1;gbkey=CDS;product=preprotein translocase I;protein_id=WP_032465675.1;transl_table=11 NC_005813.1 RefSeq gene 18743 19240 . - . ID=gene4213;Name=YP_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21125;old_locus_tag=pCD26%2CYP_pCD26 NC_005813.1 Protein Homology CDS 18743 19240 . - 0 ID=cds4113;Parent=gene4213;Dbxref=Genbank:WP_002212915.1;Name=WP_002212915.1;gbkey=CDS;product=translocation protein YopH;protein_id=WP_002212915.1;transl_table=11 NC_005813.1 RefSeq gene 19237 19584 . - . ID=gene4214;Name=YP_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21130;old_locus_tag=pCD27%2CYP_pCD27 NC_005813.1 Protein Homology CDS 19237 19584 . - 0 ID=cds4114;Parent=gene4214;Dbxref=Genbank:WP_002229801.1;Name=WP_002229801.1;gbkey=CDS;product=preprotein translocase G;protein_id=WP_002229801.1;transl_table=11 NC_005813.1 RefSeq gene 19586 19849 . - . ID=gene4215;Name=YP_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21135;old_locus_tag=pCD28%2CYP_pCD28 NC_005813.1 Protein Homology CDS 19586 19849 . - 0 ID=cds4115;Parent=gene4215;Dbxref=Genbank:WP_002212916.1;Name=WP_002212916.1;gbkey=CDS;product=type III export protein pscF;protein_id=WP_002212916.1;transl_table=11 NC_005813.1 RefSeq gene 19850 20050 . - . ID=gene4216;Name=YP_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21140;old_locus_tag=pCD29%2CYP_pCD29 NC_005813.1 Protein Homology CDS 19850 20050 . - 0 ID=cds4116;Parent=gene4216;Dbxref=Genbank:WP_002212917.1;Name=WP_002212917.1;gbkey=CDS;product=preprotein translocase SecE;protein_id=WP_002212917.1;transl_table=11 NC_005813.1 RefSeq gene 20047 21306 . - . ID=gene4217;Name=YP_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21145;old_locus_tag=pCD30%2CYP_pCD30 NC_005813.1 Protein Homology CDS 20047 21306 . - 0 ID=cds4117;Parent=gene4217;Dbxref=Genbank:WP_002212919.1;Name=WP_002212919.1;gbkey=CDS;product=preprotein translocase D;protein_id=WP_002212919.1;transl_table=11 NC_005813.1 RefSeq gene 21303 23126 . - . ID=gene4218;Name=YP_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21150;old_locus_tag=pCD31%2CYP_pCD31 NC_005813.1 Protein Homology CDS 21303 23126 . - 0 ID=cds4118;Parent=gene4218;Dbxref=Genbank:WP_002212923.1;Name=WP_002212923.1;gbkey=CDS;product=secretin;protein_id=WP_002212923.1;transl_table=11 NC_005813.1 RefSeq gene 23132 23545 . - . ID=gene4219;Name=YP_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21155;old_locus_tag=pCD32%2CYP_pCD32 NC_005813.1 Protein Homology CDS 23132 23545 . - 0 ID=cds4119;Parent=gene4219;Dbxref=Genbank:WP_002212925.1;Name=WP_002212925.1;gbkey=CDS;product=chaperone protein YscB;protein_id=WP_002212925.1;transl_table=11 NC_005813.1 RefSeq gene 23771 23869 . - . ID=gene4220;Name=YP_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21160;old_locus_tag=pCD33%2CYP_pCD33 NC_005813.1 Protein Homology CDS 23771 23869 . - 0 ID=cds4120;Parent=gene4220;Dbxref=Genbank:WP_002229797.1;Name=WP_002229797.1;gbkey=CDS;product=translocation protein YopA;protein_id=WP_002229797.1;transl_table=11 NC_005813.1 RefSeq gene 23948 24763 . - . ID=gene4221;Name=YP_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21165;old_locus_tag=pCD34%2CYP_pCD34 NC_005813.1 Protein Homology CDS 23948 24763 . - 0 ID=cds4121;Parent=gene4221;Dbxref=Genbank:WP_002212931.1;Name=WP_002212931.1;gbkey=CDS;product=thermoregulatory protein LcrF;protein_id=WP_002212931.1;transl_table=11 NC_005813.1 RefSeq gene 24887 25282 . - . ID=gene4222;Name=YP_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21170;old_locus_tag=pCD35%2CYP_pCD35 NC_005813.1 Protein Homology CDS 24887 25282 . - 0 ID=cds4122;Parent=gene4222;Dbxref=Genbank:WP_002222527.1;Name=WP_002222527.1;gbkey=CDS;product=type III secretion system chaperone VirG;protein_id=WP_002222527.1;transl_table=11 NC_005813.1 RefSeq gene 25858 26922 . - . ID=gene4223;Name=YP_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21175;old_locus_tag=pCD36%2CYP_pCD36 NC_005813.1 Protein Homology CDS 25858 26922 . - 0 ID=cds4123;Parent=gene4223;Dbxref=Genbank:WP_002212936.1;Name=WP_002212936.1;gbkey=CDS;product=translocation protein YopU;protein_id=WP_002212936.1;transl_table=11 NC_005813.1 RefSeq gene 26922 27707 . - . ID=gene4224;Name=YP_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21180;old_locus_tag=pCD37%2CYP_pCD37 NC_005813.1 Protein Homology CDS 26922 27707 . - 0 ID=cds4124;Parent=gene4224;Dbxref=Genbank:WP_002212938.1;Name=WP_002212938.1;gbkey=CDS;product=translocation protein YopT;protein_id=WP_002212938.1;transl_table=11 NC_005813.1 RefSeq gene 27704 27970 . - . ID=gene4225;Name=YP_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21185;old_locus_tag=pCD38%2CYP_pCD38 NC_005813.1 Protein Homology CDS 27704 27970 . - 0 ID=cds4125;Parent=gene4225;Dbxref=Genbank:WP_002212945.1;Name=WP_002212945.1;gbkey=CDS;product=translocation protein YopS;protein_id=WP_002212945.1;transl_table=11 NC_005813.1 RefSeq gene 27972 28625 . - . ID=gene4226;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YP_RS21190;old_locus_tag=pCD39%2CYP_pCD39 NC_005813.1 Protein Homology CDS 27972 28625 . - 0 ID=cds4126;Parent=gene4226;Dbxref=Genbank:WP_002212947.1;Name=WP_002212947.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=translocation protein YopR;protein_id=WP_002212947.1;transl_table=11 NC_005813.1 RefSeq gene 28622 29545 . - . ID=gene4227;Name=YP_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21195;old_locus_tag=pCD40%2CYP_pCD40 NC_005813.1 Protein Homology CDS 28622 29545 . - 0 ID=cds4127;Parent=gene4227;Dbxref=Genbank:WP_002212948.1;Name=WP_002212948.1;gbkey=CDS;product=translocation protein YopQ;protein_id=WP_002212948.1;transl_table=11 NC_005813.1 RefSeq gene 29542 30909 . - . ID=gene4228;Name=YP_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21200;old_locus_tag=pCD41%2CYP_pCD41 NC_005813.1 Protein Homology CDS 29542 30909 . - 0 ID=cds4128;Parent=gene4228;Dbxref=Genbank:WP_002212950.1;Name=WP_002212950.1;gbkey=CDS;product=translocation protein YopP;protein_id=WP_002212950.1;transl_table=11 NC_005813.1 RefSeq gene 30909 31373 . - . ID=gene4229;Name=YP_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21205;old_locus_tag=pCD42%2CYP_pCD42 NC_005813.1 Protein Homology CDS 30909 31373 . - 0 ID=cds4129;Parent=gene4229;Dbxref=Genbank:WP_002212952.1;Name=WP_002212952.1;gbkey=CDS;product=translocation protein YopO;protein_id=WP_002212952.1;transl_table=11 NC_005813.1 RefSeq gene 31370 32689 . - . ID=gene4230;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YP_RS21210;old_locus_tag=pCD43%2CYP_pCD43 NC_005813.1 Protein Homology CDS 31370 32689 . - 0 ID=cds4130;Parent=gene4230;Dbxref=Genbank:WP_002212955.1;Name=WP_002212955.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_002212955.1;transl_table=11 NC_005813.1 RefSeq gene 32887 33768 . + . ID=gene4231;Name=YP_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21215;old_locus_tag=pCD44%2CYP_pCD44 NC_005813.1 Protein Homology CDS 32887 33768 . + 0 ID=cds4131;Parent=gene4231;Dbxref=Genbank:WP_011171994.1;Name=WP_011171994.1;gbkey=CDS;product=membrane protein;protein_id=WP_011171994.1;transl_table=11 NC_005813.1 RefSeq gene 33749 34027 . + . ID=gene4232;Name=YP_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21220;old_locus_tag=pCD45%2CYP_pCD45 NC_005813.1 Protein Homology CDS 33749 34027 . + 0 ID=cds4132;Parent=gene4232;Dbxref=Genbank:WP_002212965.1;Name=WP_002212965.1;gbkey=CDS;product=protein TyeA;protein_id=WP_002212965.1;transl_table=11 NC_005813.1 RefSeq gene 34014 34385 . + . ID=gene4233;Name=YP_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21225;old_locus_tag=pCD46%2CYP_pCD46 NC_005813.1 Protein Homology CDS 34014 34385 . + 0 ID=cds4133;Parent=gene4233;Dbxref=Genbank:WP_002229794.1;Name=WP_002229794.1;gbkey=CDS;product=chaperone protein SycN;protein_id=WP_002229794.1;transl_table=11 NC_005813.1 RefSeq gene 34382 34750 . + . ID=gene4234;Name=YP_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21230;old_locus_tag=pCD47%2CYP_pCD47 NC_005813.1 Protein Homology CDS 34382 34750 . + 0 ID=cds4134;Parent=gene4234;Dbxref=Genbank:WP_002212969.1;Name=WP_002212969.1;gbkey=CDS;product=translocation protein YopX;protein_id=WP_002212969.1;transl_table=11 NC_005813.1 RefSeq gene 34753 35091 . + . ID=gene4235;Name=YP_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21235;old_locus_tag=pCD48%2CYP_pCD48 NC_005813.1 Protein Homology CDS 34753 35091 . + 0 ID=cds4135;Parent=gene4235;Dbxref=Genbank:WP_032465674.1;Name=WP_032465674.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_032465674.1;transl_table=11 NC_005813.1 RefSeq gene 35078 37192 . + . ID=gene4236;Name=YP_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21240;old_locus_tag=pCD49%2CYP_pCD49 NC_005813.1 Protein Homology CDS 35078 37192 . + 0 ID=cds4136;Parent=gene4236;Dbxref=Genbank:WP_002212971.1;Name=WP_002212971.1;gbkey=CDS;product=low calcium response locus protein D;protein_id=WP_002212971.1;transl_table=11 NC_005813.1 RefSeq gene 37189 37629 . + . ID=gene4237;Name=YP_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21245;old_locus_tag=pCD50%2CYP_pCD50 NC_005813.1 Protein Homology CDS 37189 37629 . + 0 ID=cds4137;Parent=gene4237;Dbxref=Genbank:WP_002220918.1;Name=WP_002220918.1;gbkey=CDS;product=low calcium response locus protein R;protein_id=WP_002220918.1;transl_table=11 NC_005813.1 RefSeq gene 37671 37958 . + . ID=gene4238;Name=YP_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21250;old_locus_tag=pCD51%2CYP_pCD51 NC_005813.1 Protein Homology CDS 37671 37958 . + 0 ID=cds4138;Parent=gene4238;Dbxref=Genbank:WP_002212973.1;Name=WP_002212973.1;gbkey=CDS;product=low calcium response locus protein G;protein_id=WP_002212973.1;transl_table=11 NC_005813.1 RefSeq gene 37960 38934 . + . ID=gene4239;Name=YP_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21255;old_locus_tag=pCD52%2CYP_pCD52 NC_005813.1 Protein Homology CDS 37960 38934 . + 0 ID=cds4139;Parent=gene4239;Dbxref=Genbank:WP_011171995.1;Name=WP_011171995.1;gbkey=CDS;product=Virulence-associated V antigen;protein_id=WP_011171995.1;transl_table=11 NC_005813.1 RefSeq gene 38937 39443 . + . ID=gene4240;Name=YP_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21260;old_locus_tag=pCD53%2CYP_pCD53 NC_005813.1 Protein Homology CDS 38937 39443 . + 0 ID=cds4140;Parent=gene4240;Dbxref=Genbank:WP_002222758.1;Name=WP_002222758.1;gbkey=CDS;product=low calcium response locus protein H;protein_id=WP_002222758.1;transl_table=11 NC_005813.1 RefSeq gene 39421 40626 . + . ID=gene4241;Name=YP_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21265;old_locus_tag=pCD54%2CYP_pCD54 NC_005813.1 Protein Homology CDS 39421 40626 . + 0 ID=cds4141;Parent=gene4241;Dbxref=Genbank:WP_002212985.1;Name=WP_002212985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212985.1;transl_table=11 NC_005813.1 RefSeq gene 40645 41565 . + . ID=gene4242;Name=YP_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21270;old_locus_tag=pCD55%2CYP_pCD55 NC_005813.1 Protein Homology CDS 40645 41565 . + 0 ID=cds4142;Parent=gene4242;Dbxref=Genbank:WP_002212987.1;Name=WP_002212987.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212987.1;transl_table=11 NC_005813.1 RefSeq region 41929 42635 . - . ID=id865;Note=partial element%3B similar to IS1635 of Yersinia intermedia (YIY18002).;gbkey=mobile_element NC_005813.1 RefSeq repeat_region 41943 42257 . + . ID=id866;gbkey=repeat_region NC_005813.1 RefSeq gene 42556 42711 . - . ID=gene4243;Name=YP_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21275;old_locus_tag=pCD58 NC_005813.1 Protein Homology CDS 42556 42711 . - 0 ID=cds4143;Parent=gene4243;Dbxref=Genbank:WP_002231150.1;Name=WP_002231150.1;gbkey=CDS;product=transposase;protein_id=WP_002231150.1;transl_table=11 NC_005813.1 RefSeq gene 42691 42900 . + . ID=gene4244;Name=YP_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21280;old_locus_tag=pCD59%2CYP_pCD59 NC_005813.1 Protein Homology CDS 42691 42900 . + 0 ID=cds4144;Parent=gene4244;Dbxref=Genbank:WP_002229781.1;Name=WP_002229781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229781.1;transl_table=11 NC_005813.1 RefSeq gene 43294 44397 . + . ID=gene4245;Name=YP_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21285;old_locus_tag=pCD60%2CYP_pCD60 NC_005813.1 Protein Homology CDS 43294 44397 . + 0 ID=cds4145;Parent=gene4245;Dbxref=Genbank:WP_002231149.1;Name=WP_002231149.1;gbkey=CDS;product=membrane protein;protein_id=WP_002231149.1;transl_table=11 NC_005813.1 RefSeq gene 44440 44655 . - . ID=gene4246;Name=YP_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21290;old_locus_tag=pCD61 NC_005813.1 Protein Homology CDS 44440 44655 . - 0 ID=cds4146;Parent=gene4246;Dbxref=Genbank:WP_002353323.1;Name=WP_002353323.1;gbkey=CDS;product=transposase;protein_id=WP_002353323.1;transl_table=11 NC_005813.1 RefSeq repeat_region 44886 45159 . + . ID=id867;gbkey=repeat_region NC_005813.1 RefSeq region 44887 45152 . + . ID=id868;Note=partial element%3B similar to part of Yersinia intermedia insertion sequences IS1635 (YIY18002).;gbkey=mobile_element NC_005813.1 RefSeq gene 45633 46052 . - . ID=gene4247;Name=YP_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21295;old_locus_tag=pCD64%2CYP_pCD64 NC_005813.1 Protein Homology CDS 45633 46052 . - 0 ID=cds4147;Parent=gene4247;Dbxref=Genbank:WP_002222515.1;Name=WP_002222515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222515.1;transl_table=11 NC_005813.1 RefSeq repeat_region 46015 46354 . + . ID=id869;gbkey=repeat_region NC_005813.1 RefSeq region 46022 46354 . - . ID=id870;Note=partial element%3B similar to part of Yersinia intermedia insertion sequences IS1635 (YIY18002).;gbkey=mobile_element NC_005813.1 RefSeq gene 46402 46713 . + . ID=gene4248;Name=YP_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21300;old_locus_tag=pCD65 NC_005813.1 Protein Homology CDS 46402 46713 . + 0 ID=cds4148;Parent=gene4248;Dbxref=Genbank:WP_002233188.1;Name=WP_002233188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233188.1;transl_table=11 NC_005813.1 RefSeq gene 46757 47155 . - . ID=gene4249;Name=YP_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21305;old_locus_tag=pCD66%2CYP_pCD66 NC_005813.1 Protein Homology CDS 46757 47155 . - 0 ID=cds4149;Parent=gene4249;Dbxref=Genbank:WP_002213004.1;Name=WP_002213004.1;gbkey=CDS;product=chaperone protein SycT;protein_id=WP_002213004.1;transl_table=11 NC_005813.1 RefSeq gene 47155 48123 . - . ID=gene4250;Name=YP_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21310;old_locus_tag=pCD67%2CYP_pCD67 NC_005813.1 Protein Homology CDS 47155 48123 . - 0 ID=cds4150;Parent=gene4250;Dbxref=Genbank:WP_002213006.1;Name=WP_002213006.1;gbkey=CDS;product=cysteine protease;protein_id=WP_002213006.1;transl_table=11 NC_005813.1 RefSeq gene 48623 49171 . + . ID=gene4251;Name=YP_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21315;old_locus_tag=pCD68%2CYP_pCD68 NC_005813.1 Protein Homology CDS 48623 49171 . + 0 ID=cds4151;Parent=gene4251;Dbxref=Genbank:WP_002213007.1;Name=WP_002213007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213007.1;transl_table=11 NC_005813.1 RefSeq repeat_region 49329 49474 . + . ID=id871;gbkey=repeat_region NC_005813.1 RefSeq gene 49781 50398 . + . ID=gene4252;Name=YP_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21320;old_locus_tag=pCD70 NC_005813.1 Protein Homology CDS 49781 50398 . + 0 ID=cds4152;Parent=gene4252;Dbxref=Genbank:WP_002353315.1;Name=WP_002353315.1;gbkey=CDS;product=conjugal transfer protein TraT;protein_id=WP_002353315.1;transl_table=11 NC_005813.1 RefSeq repeat_region 50433 51667 . + . ID=id872;gbkey=repeat_region NC_005813.1 RefSeq gene 50505 50822 . + . ID=gene4253;Name=YP_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21325;old_locus_tag=pCD71%2CYP_pCD71 NC_005813.1 Protein Homology CDS 50505 50822 . + 0 ID=cds4153;Parent=gene4253;Dbxref=Genbank:WP_002213008.1;Name=WP_002213008.1;gbkey=CDS;product=transposase;protein_id=WP_002213008.1;transl_table=11 NC_005813.1 RefSeq gene 50846 51304 . + . ID=gene4254;Name=YP_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21330;old_locus_tag=pCD72%2CYP_pCD72 NC_005813.1 Protein Homology CDS 50846 51304 . + 0 ID=cds4154;Parent=gene4254;Dbxref=Genbank:WP_002229768.1;Name=WP_002229768.1;gbkey=CDS;product=transposase;protein_id=WP_002229768.1;transl_table=11 NC_005813.1 RefSeq gene 51416 51610 . + . ID=gene4255;Name=YP_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21335;old_locus_tag=pCD73 NC_005813.1 Protein Homology CDS 51416 51610 . + 0 ID=cds4155;Parent=gene4255;Dbxref=Genbank:WP_002229766.1;Name=WP_002229766.1;gbkey=CDS;product=transposase;protein_id=WP_002229766.1;transl_table=11 NC_005813.1 RefSeq gene 52410 53576 . + . ID=gene4256;Name=YP_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21340;old_locus_tag=pCD74%2CYP_pCD74 NC_005813.1 Protein Homology CDS 52410 53576 . + 0 ID=cds4156;Parent=gene4256;Dbxref=Genbank:WP_002220902.1;Name=WP_002220902.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002220902.1;transl_table=11 NC_005813.1 RefSeq gene 53573 54538 . + . ID=gene4257;Name=YP_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21345;old_locus_tag=pCD75%2CYP_pCD75 NC_005813.1 Protein Homology CDS 53573 54538 . + 0 ID=cds4157;Parent=gene4257;Dbxref=Genbank:WP_002213354.1;Name=WP_002213354.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002213354.1;transl_table=11 NC_005813.1 RefSeq repeat_region 54666 54899 . + . ID=id873;gbkey=repeat_region NC_005813.1 RefSeq gene 54706 54954 . + . ID=gene4258;Name=YP_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21350;old_locus_tag=pCD76%2CYP_pCD76 NC_005813.1 Protein Homology CDS 54706 54954 . + 0 ID=cds4158;Parent=gene4258;Dbxref=Genbank:WP_017204796.1;Name=WP_017204796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_017204796.1;transl_table=11 NC_005813.1 RefSeq gene 55800 56042 . + . ID=gene4259;Name=YP_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21355;old_locus_tag=pCD78%2CYP_pCD78 NC_005813.1 Protein Homology CDS 55800 56042 . + 0 ID=cds4159;Parent=gene4259;Dbxref=Genbank:WP_002224342.1;Name=WP_002224342.1;gbkey=CDS;product=antitoxin ParD;protein_id=WP_002224342.1;transl_table=11 NC_005813.1 RefSeq gene 56035 56334 . + . ID=gene4260;Name=YP_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21360;old_locus_tag=pCD79%2CYP_pCD79 NC_005813.1 Protein Homology CDS 56035 56334 . + 0 ID=cds4160;Parent=gene4260;Dbxref=Genbank:WP_002213360.1;Name=WP_002213360.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002213360.1;transl_table=11 NC_005813.1 RefSeq gene 56474 57058 . - . ID=gene4261;Name=YP_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21365;old_locus_tag=pCD81%2CYP_pCD81 NC_005813.1 Protein Homology CDS 56474 57058 . - 0 ID=cds4161;Parent=gene4261;Dbxref=Genbank:WP_002353311.1;Name=WP_002353311.1;gbkey=CDS;product=virulence protein YopE;protein_id=WP_002353311.1;transl_table=11 NC_005813.1 RefSeq gene 57327 57719 . + . ID=gene4262;Name=YP_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21370;old_locus_tag=pCD82%2CYP_pCD82 NC_005813.1 Protein Homology CDS 57327 57719 . + 0 ID=cds4162;Parent=gene4262;Dbxref=Genbank:WP_002213403.1;Name=WP_002213403.1;gbkey=CDS;product=YopE regulator;protein_id=WP_002213403.1;transl_table=11 NC_005813.1 RefSeq region 57753 58427 . - . ID=id874;Note=partial element%3B similar to part of IS1222 of Enterobacter agglomerans 339 (pEA9) (X78052).;gbkey=mobile_element NC_005813.1 RefSeq gene 57782 58279 . - . ID=gene4263;Name=YP_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21375;old_locus_tag=pCD83%2CYP_pCD83 NC_005813.1 Protein Homology CDS 57782 58279 . - 0 ID=cds4163;Parent=gene4263;Dbxref=Genbank:WP_002428538.1;Name=WP_002428538.1;gbkey=CDS;product=transposase;protein_id=WP_002428538.1;transl_table=11 NC_005813.1 RefSeq region 58432 60098 . + . ID=id875;Note=partial element%3B similar to part of Pseudomonas aeruginosa PAO25 (pR68.45) (X14793%2C 2131 nt).;gbkey=mobile_element NC_005813.1 RefSeq gene 58529 59701 . + . ID=gene4264;Name=YP_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21385;old_locus_tag=pCD85%2CYP_pCD85 NC_005813.1 Protein Homology CDS 58529 59701 . + 0 ID=cds4164;Parent=gene4264;Dbxref=Genbank:WP_002220893.1;Name=WP_002220893.1;gbkey=CDS;product=integrase;protein_id=WP_002220893.1;transl_table=11 NC_005813.1 RefSeq gene 59701 60099 . + . ID=gene4265;Name=YP_RS21390;end_range=60099,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS21390;old_locus_tag=pCD86;partial=true;pseudo=true NC_005813.1 Protein Homology CDS 59701 60099 . + 0 ID=cds4165;Parent=gene4265;end_range=60099,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=AAA family ATPase;pseudo=true;transl_table=11 NC_005813.1 RefSeq gene 60476 60901 . + . ID=gene4266;Name=YP_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21395;old_locus_tag=pCD87%2CYP_pCD87 NC_005813.1 Protein Homology CDS 60476 60901 . + 0 ID=cds4166;Parent=gene4266;Dbxref=Genbank:WP_002213267.1;Name=WP_002213267.1;gbkey=CDS;product=yopH targeting protein;protein_id=WP_002213267.1;transl_table=11 NC_005813.1 RefSeq repeat_region 61017 61628 . + . ID=id876;gbkey=repeat_region NC_005813.1 RefSeq gene 61049 61876 . - . ID=gene4267;Name=YP_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21400;old_locus_tag=pCD88%2CYP_pCD88 NC_005813.1 Protein Homology CDS 61049 61876 . - 0 ID=cds4167;Parent=gene4267;Dbxref=Genbank:WP_032465673.1;Name=WP_032465673.1;gbkey=CDS;product=transposase;protein_id=WP_032465673.1;transl_table=11 NC_005813.1 RefSeq gene 61882 62148 . - . ID=gene4268;Name=YP_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21405;old_locus_tag=pCD89%2CYP_pCD89 NC_005813.1 Protein Homology CDS 61882 62148 . - 0 ID=cds4168;Parent=gene4268;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_005813.1 RefSeq gene 62248 62577 . - . ID=gene4269;Name=YP_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21410;old_locus_tag=pCD90%2CYP_pCD90 NC_005813.1 Protein Homology CDS 62248 62577 . - 0 ID=cds4169;Parent=gene4269;Dbxref=Genbank:WP_002229829.1;Name=WP_002229829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229829.1;transl_table=11 NC_005813.1 RefSeq gene 62716 63180 . - . ID=gene4270;Name=YP_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21415;old_locus_tag=pCD91%2CYP_pCD91 NC_005813.1 Protein Homology CDS 62716 63180 . - 0 ID=cds4170;Parent=gene4270;Dbxref=Genbank:WP_002224338.1;Name=WP_002224338.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224338.1;transl_table=11 NC_005813.1 RefSeq gene 63199 63750 . - . ID=gene4271;Name=YP_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21420;old_locus_tag=pCD92%2CYP_pCD92 NC_005813.1 Protein Homology CDS 63199 63750 . - 0 ID=cds4171;Parent=gene4271;Dbxref=Genbank:WP_002213258.1;Name=WP_002213258.1;gbkey=CDS;product=recombinase;protein_id=WP_002213258.1;transl_table=11 NC_005813.1 RefSeq gene 63914 66229 . + . ID=gene4272;Name=YP_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21425;old_locus_tag=pCD93%2CYP_pCD93 NC_005813.1 Protein Homology CDS 63914 66229 . + 0 ID=cds4172;Parent=gene4272;Dbxref=Genbank:WP_002213256.1;Name=WP_002213256.1;gbkey=CDS;product=transposase;protein_id=WP_002213256.1;transl_table=11 NC_005813.1 RefSeq gene 66226 66606 . - . ID=gene4273;Name=YP_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21430;old_locus_tag=pCD94 NC_005813.1 Protein Homology CDS 66226 66606 . - 0 ID=cds4173;Parent=gene4273;Dbxref=Genbank:WP_002213254.1;Name=WP_002213254.1;gbkey=CDS;product=transposase;protein_id=WP_002213254.1;transl_table=11 NC_005813.1 RefSeq repeat_region 66384 66529 . + . ID=id877;gbkey=repeat_region NC_005813.1 RefSeq gene 67212 67463 . + . ID=gene4274;Name=YP_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21435 NC_005813.1 Protein Homology CDS 67212 67463 . + 0 ID=cds4174;Parent=gene4274;Dbxref=Genbank:WP_002356450.1;Name=WP_002356450.1;gbkey=CDS;product=adhesin;protein_id=WP_002356450.1;transl_table=11 NC_005813.1 RefSeq gene 67940 68515 . + . ID=gene4275;Name=YP_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21440 NC_005813.1 Protein Homology CDS 67940 68515 . + 0 ID=cds4175;Parent=gene4275;Dbxref=Genbank:WP_002353282.1;Name=WP_002353282.1;gbkey=CDS;product=adhesin;protein_id=WP_002353282.1;transl_table=11 NC_005813.1 RefSeq gene 68638 68844 . + . ID=gene4276;Name=YP_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21445 NC_005813.1 Protein Homology CDS 68638 68844 . + 0 ID=cds4176;Parent=gene4276;Dbxref=Genbank:WP_011557428.1;Name=WP_011557428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011557428.1;transl_table=11 NC_005813.1 RefSeq repeat_region 68742 69136 . + . ID=id878;gbkey=repeat_region NC_005813.1 RefSeq gene 68841 69110 . - . ID=gene4277;Name=YP_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21450;old_locus_tag=pCD96 NC_005813.1 Protein Homology CDS 68841 69110 . - 0 ID=cds4177;Parent=gene4277;Dbxref=Genbank:WP_042469136.1;Name=WP_042469136.1;gbkey=CDS;product=transposase;protein_id=WP_042469136.1;transl_table=11 NC_005813.1 RefSeq gene 69179 69637 . + . ID=gene4278;Name=YP_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21455;old_locus_tag=pCD97%2CYP_pCD97 NC_005813.1 Protein Homology CDS 69179 69637 . + 0 ID=cds4178;Parent=gene4278;Dbxref=Genbank:WP_002213246.1;Name=WP_002213246.1;gbkey=CDS;product=DNA helicase TraI;protein_id=WP_002213246.1;transl_table=11 NC_005813.1 RefSeq repeat_region 69736 70159 . + . ID=id879;gbkey=repeat_region NC_005813.1 RefSeq gene 69809 70126 . + . ID=gene4279;Name=YP_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21460;old_locus_tag=pCD98%2CYP_pCD98 NC_005813.1 Protein Homology CDS 69809 70126 . + 0 ID=cds4179;Parent=gene4279;Dbxref=Genbank:WP_002213244.1;Name=WP_002213244.1;gbkey=CDS;product=transposase;protein_id=WP_002213244.1;transl_table=11 ##sequence-region NC_005814.1 1 21742 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=229193 NC_005814.1 RefSeq region 1 21742 . + . ID=id880;Dbxref=taxon:229193;Is_circular=true;Name=pCRY;biovar=Microtus;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pCRY;strain=91001;sub-species=microtus NC_005814.1 RefSeq gene 739 1200 . - . ID=gene4280;Name=YP_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21465 NC_005814.1 Protein Homology CDS 739 1200 . - 0 ID=cds4180;Parent=gene4280;Dbxref=Genbank:WP_038928942.1;Name=WP_038928942.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038928942.1;transl_table=11 NC_005814.1 RefSeq gene 1901 2257 . - . ID=gene4281;Name=YP_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21470;old_locus_tag=pCRY03%2CYP_pCRY03 NC_005814.1 Protein Homology CDS 1901 2257 . - 0 ID=cds4181;Parent=gene4281;Dbxref=Genbank:WP_011172003.1;Name=WP_011172003.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011172003.1;transl_table=11 NC_005814.1 RefSeq gene 2508 2963 . + . ID=gene4282;Name=YP_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21475;old_locus_tag=pCRY04%2CYP_pCRY04 NC_005814.1 Protein Homology CDS 2508 2963 . + 0 ID=cds4182;Parent=gene4282;Dbxref=Genbank:WP_011172004.1;Name=WP_011172004.1;gbkey=CDS;product=transcriptional antiterminator NusG;protein_id=WP_011172004.1;transl_table=11 NC_005814.1 RefSeq gene 3035 3250 . + . ID=gene4283;Name=YP_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21480;old_locus_tag=pCRY05 NC_005814.1 Protein Homology CDS 3035 3250 . + 0 ID=cds4183;Parent=gene4283;Dbxref=Genbank:WP_004178170.1;Name=WP_004178170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_004178170.1;transl_table=11 NC_005814.1 RefSeq gene 3255 3473 . + . ID=gene4284;Name=YP_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21485;old_locus_tag=pCRY06%2CYP_pCRY06 NC_005814.1 Protein Homology CDS 3255 3473 . + 0 ID=cds4184;Parent=gene4284;Dbxref=Genbank:WP_011172006.1;Name=WP_011172006.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_011172006.1;transl_table=11 NC_005814.1 RefSeq gene 3591 4301 . + . ID=gene4285;Name=YP_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21490;old_locus_tag=pCRY07%2CYP_pCRY07 NC_005814.1 Protein Homology CDS 3591 4301 . + 0 ID=cds4185;Parent=gene4285;Dbxref=Genbank:WP_011172007.1;Name=WP_011172007.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011172007.1;transl_table=11 NC_005814.1 RefSeq gene 4298 4603 . + . ID=gene4286;Name=YP_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21495;old_locus_tag=pCRY08%2CYP_pCRY08 NC_005814.1 Protein Homology CDS 4298 4603 . + 0 ID=cds4186;Parent=gene4286;Dbxref=Genbank:WP_011172008.1;Name=WP_011172008.1;gbkey=CDS;product=type IV secretory pathway VirB2 component;protein_id=WP_011172008.1;transl_table=11 NC_005814.1 RefSeq gene 4616 7354 . + . ID=gene4287;Name=YP_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21500;old_locus_tag=pCRY09%2CYP_pCRY09 NC_005814.1 Protein Homology CDS 4616 7354 . + 0 ID=cds4187;Parent=gene4287;Dbxref=Genbank:WP_016603709.1;Name=WP_016603709.1;gbkey=CDS;product=ATPase;protein_id=WP_016603709.1;transl_table=11 NC_005814.1 RefSeq gene 7372 8076 . + . ID=gene4288;Name=YP_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21505;old_locus_tag=pCRY10%2CYP_pCRY10 NC_005814.1 Protein Homology CDS 7372 8076 . + 0 ID=cds4188;Parent=gene4288;Dbxref=Genbank:WP_011172010.1;Name=WP_011172010.1;gbkey=CDS;product=type IV secretion system VirB5 component;protein_id=WP_011172010.1;transl_table=11 NC_005814.1 RefSeq gene 8090 8317 . + . ID=gene4289;Name=YP_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21510;old_locus_tag=pCRY11%2CYP_pCRY11 NC_005814.1 Protein Homology CDS 8090 8317 . + 0 ID=cds4189;Parent=gene4289;Dbxref=Genbank:WP_011172011.1;Name=WP_011172011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011172011.1;transl_table=11 NC_005814.1 RefSeq gene 8328 9401 . + . ID=gene4290;Name=YP_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21515;old_locus_tag=pCRY12%2CYP_pCRY12 NC_005814.1 Protein Homology CDS 8328 9401 . + 0 ID=cds4190;Parent=gene4290;Dbxref=Genbank:WP_011172012.1;Name=WP_011172012.1;gbkey=CDS;product=type IV secretory pathway VirB6 component;protein_id=WP_011172012.1;transl_table=11 NC_005814.1 RefSeq gene 9622 10305 . + . ID=gene4291;Name=YP_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21525;old_locus_tag=pCRY13%2CYP_pCRY13 NC_005814.1 Protein Homology CDS 9622 10305 . + 0 ID=cds4191;Parent=gene4291;Dbxref=Genbank:WP_004178111.1;Name=WP_004178111.1;gbkey=CDS;product=membrane protein;protein_id=WP_004178111.1;transl_table=11 NC_005814.1 RefSeq gene 10305 11210 . + . ID=gene4292;Name=YP_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21530;old_locus_tag=pCRY14%2CYP_pCRY14 NC_005814.1 Protein Homology CDS 10305 11210 . + 0 ID=cds4192;Parent=gene4292;Dbxref=Genbank:WP_038928781.1;Name=WP_038928781.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038928781.1;transl_table=11 NC_005814.1 RefSeq gene 11254 12504 . + . ID=gene4293;Name=YP_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21535;old_locus_tag=pCRY15%2CYP_pCRY15 NC_005814.1 Protein Homology CDS 11254 12504 . + 0 ID=cds4193;Parent=gene4293;Dbxref=Genbank:WP_011172014.1;Name=WP_011172014.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_011172014.1;transl_table=11 NC_005814.1 RefSeq gene 12494 13519 . + . ID=gene4294;Name=YP_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21540;old_locus_tag=pCRY16%2CYP_pCRY16 NC_005814.1 Protein Homology CDS 12494 13519 . + 0 ID=cds4194;Parent=gene4294;Dbxref=Genbank:WP_000125558.1;Name=WP_000125558.1;gbkey=CDS;product=ATPase;protein_id=WP_000125558.1;transl_table=11 NC_005814.1 RefSeq gene 13516 13914 . + . ID=gene4295;Name=YP_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21545;old_locus_tag=pCRY17%2CYP_pCRY17 NC_005814.1 Protein Homology CDS 13516 13914 . + 0 ID=cds4195;Parent=gene4295;Dbxref=Genbank:WP_000592251.1;Name=WP_000592251.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000592251.1;transl_table=11 NC_005814.1 RefSeq gene 13950 14255 . + . ID=gene4296;Name=YP_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21550;old_locus_tag=pCRY18%2CYP_pCRY18 NC_005814.1 Protein Homology CDS 13950 14255 . + 0 ID=cds4196;Parent=gene4296;Dbxref=Genbank:WP_011172015.1;Name=WP_011172015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011172015.1;transl_table=11 NC_005814.1 RefSeq gene 14289 14594 . + . ID=gene4297;Name=YP_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21555;old_locus_tag=pCRY19%2CYP_pCRY19 NC_005814.1 Protein Homology CDS 14289 14594 . + 0 ID=cds4197;Parent=gene4297;Dbxref=Genbank:WP_011172016.1;Name=WP_011172016.1;gbkey=CDS;product=dopa decarboxylase remnant;protein_id=WP_011172016.1;transl_table=11 NC_005814.1 RefSeq gene 14615 15002 . + . ID=gene4298;Name=YP_RS21560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS21560;old_locus_tag=pCRY20;pseudo=true NC_005814.1 Protein Homology CDS 14615 15002 . + 0 ID=cds4198;Parent=gene4298;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:14906..14908%2Caa:Other);transl_table=11 NC_005814.1 RefSeq gene 15374 17110 . + . ID=gene4299;Name=YP_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21565;old_locus_tag=pCRY22%2CYP_pCRY22 NC_005814.1 Protein Homology CDS 15374 17110 . + 0 ID=cds4199;Parent=gene4299;Dbxref=Genbank:WP_041175934.1;Name=WP_041175934.1;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_041175934.1;transl_table=11 NC_005814.1 RefSeq gene 17119 17874 . + . ID=gene4300;Name=YP_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21570;old_locus_tag=pCRY23%2CYP_pCRY23 NC_005814.1 Protein Homology CDS 17119 17874 . + 0 ID=cds4200;Parent=gene4300;Dbxref=Genbank:WP_016603568.1;Name=WP_016603568.1;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein MobC;protein_id=WP_016603568.1;transl_table=11 NC_005814.1 RefSeq gene 17911 18384 . + . ID=gene4301;Name=YP_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21575;old_locus_tag=pCRY24%2CYP_pCRY24 NC_005814.1 Protein Homology CDS 17911 18384 . + 0 ID=cds4201;Parent=gene4301;Dbxref=Genbank:WP_011172021.1;Name=WP_011172021.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_011172021.1;transl_table=11 NC_005814.1 RefSeq gene 18445 18786 . + . ID=gene4302;Name=YP_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21580;old_locus_tag=pCRY25%2CYP_pCRY25 NC_005814.1 Protein Homology CDS 18445 18786 . + 0 ID=cds4202;Parent=gene4302;Dbxref=Genbank:WP_011172022.1;Name=WP_011172022.1;gbkey=CDS;product=membrane protein;protein_id=WP_011172022.1;transl_table=11 NC_005814.1 RefSeq gene 18824 19057 . - . ID=gene4303;Name=YP_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21585;old_locus_tag=pCRY26%2CYP_pCRY26 NC_005814.1 Protein Homology CDS 18824 19057 . - 0 ID=cds4203;Parent=gene4303;Dbxref=Genbank:WP_004178129.1;Name=WP_004178129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_004178129.1;transl_table=11 NC_005814.1 RefSeq gene 19098 19745 . - . ID=gene4304;Name=YP_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21590;old_locus_tag=pCRY27%2CYP_pCRY27 NC_005814.1 Protein Homology CDS 19098 19745 . - 0 ID=cds4204;Parent=gene4304;Dbxref=Genbank:WP_004178130.1;Name=WP_004178130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_004178130.1;transl_table=11 NC_005814.1 RefSeq gene 19866 20648 . - . ID=gene4305;Name=YP_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21595;old_locus_tag=pCRY28%2CYP_pCRY28 NC_005814.1 Protein Homology CDS 19866 20648 . - 0 ID=cds4205;Parent=gene4305;Dbxref=Genbank:WP_016603533.1;Name=WP_016603533.1;gbkey=CDS;product=zinc metalloprotease;protein_id=WP_016603533.1;transl_table=11 NC_005814.1 RefSeq gene 21026 21307 . - . ID=gene4306;Name=YP_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21600;old_locus_tag=pCRY29%2CYP_pCRY29 NC_005814.1 Protein Homology CDS 21026 21307 . - 0 ID=cds4206;Parent=gene4306;Dbxref=Genbank:WP_000780222.1;Name=WP_000780222.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_000780222.1;transl_table=11 NC_005814.1 RefSeq gene 21288 21617 . - . ID=gene4307;Name=YP_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21605 NC_005814.1 Protein Homology CDS 21288 21617 . - 0 ID=cds4207;Parent=gene4307;Dbxref=Genbank:WP_000493286.1;Name=WP_000493286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000493286.1;transl_table=11 ##sequence-region NC_005815.1 1 106642 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=229193 NC_005815.1 RefSeq region 1 106642 . + . ID=id881;Dbxref=taxon:229193;Is_circular=true;Name=pMT1;biovar=Microtus;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pMT1;strain=91001;sub-species=microtus NC_005815.1 RefSeq gene 106035 106643 . + . ID=gene4308;Name=YP_RS21610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS21610;old_locus_tag=pMT128;partial=true;pseudo=true NC_005815.1 Protein Homology CDS 106035 106643 . + 0 ID=cds4208;Parent=gene4308;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NC_005815.1 RefSeq repeat_region 1 1954 . + . ID=id882;gbkey=repeat_region NC_005815.1 RefSeq region 1 1954 . + . ID=id883;gbkey=mobile_element NC_005815.1 RefSeq gene 87 1109 . + . ID=gene4309;Name=YP_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21615;old_locus_tag=pMT001%2CYP_pMT001 NC_005815.1 Protein Homology CDS 87 1109 . + 0 ID=cds4209;Parent=gene4309;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005815.1 RefSeq gene 1109 1888 . + . ID=gene4310;Name=YP_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21620;old_locus_tag=pMT002%2CYP_pMT002 NC_005815.1 Protein Homology CDS 1109 1888 . + 0 ID=cds4210;Parent=gene4310;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005815.1 RefSeq gene 2018 2626 . - . ID=gene4311;Name=YP_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21625;old_locus_tag=pMT003%2CYP_pMT003 NC_005815.1 Protein Homology CDS 2018 2626 . - 0 ID=cds4211;Parent=gene4311;Dbxref=Genbank:WP_002211769.1;Name=WP_002211769.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211769.1;transl_table=11 NC_005815.1 RefSeq gene 2719 2931 . - . ID=gene4312;Name=YP_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21630;old_locus_tag=pMT004%2CYP_pMT004 NC_005815.1 Protein Homology CDS 2719 2931 . - 0 ID=cds4212;Parent=gene4312;Dbxref=Genbank:WP_002217458.1;Name=WP_002217458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217458.1;transl_table=11 NC_005815.1 RefSeq gene 2928 5816 . - . ID=gene4313;Name=YP_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21635;old_locus_tag=pMT005%2CYP_pMT005 NC_005815.1 Protein Homology CDS 2928 5816 . - 0 ID=cds4213;Parent=gene4313;Dbxref=Genbank:WP_002211770.1;Name=WP_002211770.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211770.1;transl_table=11 NC_005815.1 RefSeq gene 5897 6529 . - . ID=gene4314;Name=YP_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21640;old_locus_tag=pMT006%2CYP_pMT006 NC_005815.1 Protein Homology CDS 5897 6529 . - 0 ID=cds4214;Parent=gene4314;Dbxref=Genbank:WP_002214116.1;Name=WP_002214116.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214116.1;transl_table=11 NC_005815.1 RefSeq gene 6532 11163 . - . ID=gene4315;Name=YP_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21645;old_locus_tag=pMT007%2CYP_pMT007 NC_005815.1 Protein Homology CDS 6532 11163 . - 0 ID=cds4215;Parent=gene4315;Dbxref=Genbank:WP_002214118.1;Name=WP_002214118.1;gbkey=CDS;product=host specificity protein J;protein_id=WP_002214118.1;transl_table=11 NC_005815.1 RefSeq gene 11185 11772 . - . ID=gene4316;Name=YP_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21650;old_locus_tag=pMT008%2CYP_pMT008 NC_005815.1 Protein Homology CDS 11185 11772 . - 0 ID=cds4216;Parent=gene4316;Dbxref=Genbank:WP_002211773.1;Name=WP_002211773.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211773.1;transl_table=11 NC_005815.1 RefSeq gene 11760 12557 . - . ID=gene4317;Name=YP_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21655;old_locus_tag=pMT009%2CYP_pMT009 NC_005815.1 Protein Homology CDS 11760 12557 . - 0 ID=cds4217;Parent=gene4317;Dbxref=Genbank:WP_002211774.1;Name=WP_002211774.1;gbkey=CDS;product=tail protein;protein_id=WP_002211774.1;transl_table=11 NC_005815.1 RefSeq gene 12550 13248 . - . ID=gene4318;Name=YP_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21660;old_locus_tag=pMT010%2CYP_pMT010 NC_005815.1 Protein Homology CDS 12550 13248 . - 0 ID=cds4218;Parent=gene4318;Dbxref=Genbank:WP_011901831.1;Name=WP_011901831.1;gbkey=CDS;product=tail protein;protein_id=WP_011901831.1;transl_table=11 NC_005815.1 RefSeq gene 13338 13673 . - . ID=gene4319;Name=YP_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21665;old_locus_tag=pMT011%2CYP_pMT011 NC_005815.1 Protein Homology CDS 13338 13673 . - 0 ID=cds4219;Parent=gene4319;Dbxref=Genbank:WP_000440566.1;Name=WP_000440566.1;gbkey=CDS;product=tail protein;protein_id=WP_000440566.1;transl_table=11 NC_005815.1 RefSeq gene 13715 17956 . - . ID=gene4320;Name=YP_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21670;old_locus_tag=pMT012%2CYP_pMT012 NC_005815.1 Protein Homology CDS 13715 17956 . - 0 ID=cds4220;Parent=gene4320;Dbxref=Genbank:WP_011172025.1;Name=WP_011172025.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_011172025.1;transl_table=11 NC_005815.1 RefSeq gene 17964 18197 . - . ID=gene4321;Name=YP_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21675;old_locus_tag=pMT013%2CYP_pMT013 NC_005815.1 Protein Homology CDS 17964 18197 . - 0 ID=cds4221;Parent=gene4321;Dbxref=Genbank:WP_002211777.1;Name=WP_002211777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211777.1;transl_table=11 NC_005815.1 RefSeq gene 18314 18631 . - . ID=gene4322;Name=YP_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21685;old_locus_tag=pMT014%2CYP_pMT014 NC_005815.1 Protein Homology CDS 18314 18631 . - 0 ID=cds4222;Parent=gene4322;Dbxref=Genbank:WP_000163862.1;Name=WP_000163862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000163862.1;transl_table=11 NC_005815.1 RefSeq gene 18691 19437 . - . ID=gene4323;Name=YP_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21690;old_locus_tag=pMT015%2CYP_pMT015 NC_005815.1 Protein Homology CDS 18691 19437 . - 0 ID=cds4223;Parent=gene4323;Dbxref=Genbank:WP_002211778.1;Name=WP_002211778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211778.1;transl_table=11 NC_005815.1 RefSeq gene 19512 19895 . - . ID=gene4324;Name=YP_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21695;old_locus_tag=pMT016%2CYP_pMT016 NC_005815.1 Protein Homology CDS 19512 19895 . - 0 ID=cds4224;Parent=gene4324;Dbxref=Genbank:WP_002211779.1;Name=WP_002211779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211779.1;transl_table=11 NC_005815.1 RefSeq gene 19897 20370 . - . ID=gene4325;Name=YP_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21700;old_locus_tag=pMT017%2CYP_pMT017 NC_005815.1 Protein Homology CDS 19897 20370 . - 0 ID=cds4225;Parent=gene4325;Dbxref=Genbank:WP_002211780.1;Name=WP_002211780.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211780.1;transl_table=11 NC_005815.1 RefSeq gene 20361 20705 . - . ID=gene4326;Name=YP_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21705;old_locus_tag=pMT018 NC_005815.1 Protein Homology CDS 20361 20705 . - 0 ID=cds4226;Parent=gene4326;Dbxref=Genbank:WP_001027662.1;Name=WP_001027662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001027662.1;transl_table=11 NC_005815.1 RefSeq gene 20803 21636 . - . ID=gene4327;Name=YP_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21710;old_locus_tag=pMT019%2CYP_pMT019 NC_005815.1 Protein Homology CDS 20803 21636 . - 0 ID=cds4227;Parent=gene4327;Dbxref=Genbank:WP_002211781.1;Name=WP_002211781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211781.1;transl_table=11 NC_005815.1 RefSeq gene 21636 22070 . - . ID=gene4328;Name=YP_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21715;old_locus_tag=pMT020%2CYP_pMT020 NC_005815.1 Protein Homology CDS 21636 22070 . - 0 ID=cds4228;Parent=gene4328;Dbxref=Genbank:WP_002211782.1;Name=WP_002211782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211782.1;transl_table=11 NC_005815.1 RefSeq gene 22114 22776 . - . ID=gene4329;Name=YP_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21720;old_locus_tag=pMT021%2CYP_pMT021 NC_005815.1 Protein Homology CDS 22114 22776 . - 0 ID=cds4229;Parent=gene4329;Dbxref=Genbank:WP_002211783.1;Name=WP_002211783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211783.1;transl_table=11 NC_005815.1 RefSeq gene 22851 23726 . - . ID=gene4330;Name=YP_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21725;old_locus_tag=pMT022%2CYP_pMT022 NC_005815.1 Protein Homology CDS 22851 23726 . - 0 ID=cds4230;Parent=gene4330;Dbxref=Genbank:WP_002211784.1;Name=WP_002211784.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_002211784.1;transl_table=11 NC_005815.1 RefSeq gene 23753 24649 . - . ID=gene4331;Name=YP_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21730;old_locus_tag=pMT023%2CYP_pMT023 NC_005815.1 Protein Homology CDS 23753 24649 . - 0 ID=cds4231;Parent=gene4331;Dbxref=Genbank:WP_002231160.1;Name=WP_002231160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231160.1;transl_table=11 NC_005815.1 RefSeq gene 24672 26246 . - . ID=gene4332;Name=YP_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21735;old_locus_tag=pMT024%2CYP_pMT024 NC_005815.1 Protein Homology CDS 24672 26246 . - 0 ID=cds4232;Parent=gene4332;Dbxref=Genbank:WP_025476523.1;Name=WP_025476523.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025476523.1;transl_table=11 NC_005815.1 RefSeq gene 26280 27536 . - . ID=gene4333;Name=YP_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21740;old_locus_tag=pMT025%2CYP_pMT025 NC_005815.1 Protein Homology CDS 26280 27536 . - 0 ID=cds4233;Parent=gene4333;Dbxref=Genbank:WP_002211787.1;Name=WP_002211787.1;gbkey=CDS;product=terminase;protein_id=WP_002211787.1;transl_table=11 NC_005815.1 RefSeq gene 27539 28180 . - . ID=gene4334;Name=YP_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21745;old_locus_tag=pMT026%2CYP_pMT026 NC_005815.1 Protein Homology CDS 27539 28180 . - 0 ID=cds4234;Parent=gene4334;Dbxref=Genbank:WP_011172027.1;Name=WP_011172027.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_011172027.1;transl_table=11 NC_005815.1 RefSeq gene 28376 28642 . - . ID=gene4335;Name=YP_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21750;old_locus_tag=pMT027%2CYP_pMT027 NC_005815.1 Protein Homology CDS 28376 28642 . - 0 ID=cds4235;Parent=gene4335;Dbxref=Genbank:WP_000176291.1;Name=WP_000176291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000176291.1;transl_table=11 NC_005815.1 RefSeq gene 28652 29542 . - . ID=gene4336;Name=YP_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21755;old_locus_tag=pMT028%2CYP_pMT028 NC_005815.1 Protein Homology CDS 28652 29542 . - 0 ID=cds4236;Parent=gene4336;Dbxref=Genbank:WP_002211789.1;Name=WP_002211789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211789.1;transl_table=11 NC_005815.1 RefSeq gene 29548 29802 . - . ID=gene4337;Name=YP_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21760;old_locus_tag=pMT029%2CYP_pMT029 NC_005815.1 Protein Homology CDS 29548 29802 . - 0 ID=cds4237;Parent=gene4337;Dbxref=Genbank:WP_002211790.1;Name=WP_002211790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211790.1;transl_table=11 NC_005815.1 RefSeq gene 29795 30433 . - . ID=gene4338;Name=YP_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21765;old_locus_tag=pMT030%2CYP_pMT030 NC_005815.1 Protein Homology CDS 29795 30433 . - 0 ID=cds4238;Parent=gene4338;Dbxref=Genbank:WP_002211791.1;Name=WP_002211791.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211791.1;transl_table=11 NC_005815.1 RefSeq gene 30430 31098 . - . ID=gene4339;Name=YP_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21770;old_locus_tag=pMT031%2CYP_pMT031 NC_005815.1 Protein Homology CDS 30430 31098 . - 0 ID=cds4239;Parent=gene4339;Dbxref=Genbank:WP_002211792.1;Name=WP_002211792.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002211792.1;transl_table=11 NC_005815.1 RefSeq gene 31098 31796 . - . ID=gene4340;Name=YP_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21775;old_locus_tag=pMT032%2CYP_pMT032 NC_005815.1 Protein Homology CDS 31098 31796 . - 0 ID=cds4240;Parent=gene4340;Dbxref=Genbank:WP_002228791.1;Name=WP_002228791.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002228791.1;transl_table=11 NC_005815.1 RefSeq gene 31861 33420 . + . ID=gene4341;Name=YP_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21780;old_locus_tag=pMT033%2CYP_pMT033 NC_005815.1 Protein Homology CDS 31861 33420 . + 0 ID=cds4241;Parent=gene4341;Dbxref=Genbank:WP_002211794.1;Name=WP_002211794.1;gbkey=CDS;product=helicase;protein_id=WP_002211794.1;transl_table=11 NC_005815.1 RefSeq gene 33423 33701 . + . ID=gene4342;Name=YP_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21785;old_locus_tag=pMT034%2CYP_pMT034 NC_005815.1 Protein Homology CDS 33423 33701 . + 0 ID=cds4242;Parent=gene4342;Dbxref=Genbank:WP_002214131.1;Name=WP_002214131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214131.1;transl_table=11 NC_005815.1 RefSeq gene 33761 34183 . + . ID=gene4343;Name=YP_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21790;old_locus_tag=pMT035%2CYP_pMT035 NC_005815.1 Protein Homology CDS 33761 34183 . + 0 ID=cds4243;Parent=gene4343;Dbxref=Genbank:WP_002211796.1;Name=WP_002211796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211796.1;transl_table=11 NC_005815.1 RefSeq gene 34188 34715 . + . ID=gene4344;Name=YP_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21795;old_locus_tag=pMT036%2CYP_pMT036 NC_005815.1 Protein Homology CDS 34188 34715 . + 0 ID=cds4244;Parent=gene4344;Dbxref=Genbank:WP_002214134.1;Name=WP_002214134.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214134.1;transl_table=11 NC_005815.1 RefSeq gene 35039 35689 . + . ID=gene4345;Name=YP_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21800;old_locus_tag=pMT037%2CYP_pMT037 NC_005815.1 Protein Homology CDS 35039 35689 . + 0 ID=cds4245;Parent=gene4345;Dbxref=Genbank:WP_002211799.1;Name=WP_002211799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211799.1;transl_table=11 NC_005815.1 RefSeq gene 35774 36001 . + . ID=gene4346;Name=YP_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21805;old_locus_tag=pMT038%2CYP_pMT038 NC_005815.1 Protein Homology CDS 35774 36001 . + 0 ID=cds4246;Parent=gene4346;Dbxref=Genbank:WP_002214137.1;Name=WP_002214137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214137.1;transl_table=11 NC_005815.1 RefSeq gene 36302 36660 . + . ID=gene4347;Name=YP_RS21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS21810;old_locus_tag=pMT039%2CYP_pMT039;pseudo=true NC_005815.1 Protein Homology CDS 36302 36660 . + 0 ID=cds4247;Parent=gene4347;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_005815.1 RefSeq gene 36639 37121 . - . ID=gene4348;Name=YP_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21815;old_locus_tag=pMT040%2CYP_pMT040 NC_005815.1 Protein Homology CDS 36639 37121 . - 0 ID=cds4248;Parent=gene4348;Dbxref=Genbank:WP_002211801.1;Name=WP_002211801.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211801.1;transl_table=11 NC_005815.1 RefSeq gene 37134 37310 . - . ID=gene4349;Name=YP_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21820;old_locus_tag=pMT041 NC_005815.1 Protein Homology CDS 37134 37310 . - 0 ID=cds4249;Parent=gene4349;Dbxref=Genbank:WP_002233073.1;Name=WP_002233073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233073.1;transl_table=11 NC_005815.1 RefSeq gene 37327 37608 . - . ID=gene4350;Name=YP_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21825;old_locus_tag=pMT042 NC_005815.1 Protein Homology CDS 37327 37608 . - 0 ID=cds4250;Parent=gene4350;Dbxref=Genbank:WP_002211802.1;Name=WP_002211802.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211802.1;transl_table=11 NC_005815.1 RefSeq region 37700 38411 . - . ID=id884;gbkey=mobile_element NC_005815.1 RefSeq gene 37808 38266 . - . ID=gene4351;Name=YP_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21830;old_locus_tag=pMT043%2CYP_pMT043 NC_005815.1 Protein Homology CDS 37808 38266 . - 0 ID=cds4251;Parent=gene4351;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_005815.1 RefSeq gene 38276 38399 . - . ID=gene4352;Name=YP_RS22305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YP_RS22305 NC_005815.1 cmsearch ncRNA 38276 38399 . - . ID=rna94;Parent=gene4352;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_005815.1 cmsearch exon 38276 38399 . - . ID=id885;Parent=rna94;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_005815.1 RefSeq gene 38505 39259 . - . ID=gene4353;Name=YP_RS21835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YP_RS21835;pseudo=true NC_005815.1 Protein Homology CDS 38505 39259 . - 0 ID=cds4252;Parent=gene4353;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_005815.1 RefSeq gene 39458 40600 . - . ID=gene4354;Name=YP_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21840;old_locus_tag=pMT046%2CYP_pMT046 NC_005815.1 Protein Homology CDS 39458 40600 . - 0 ID=cds4253;Parent=gene4354;Dbxref=Genbank:WP_002231164.1;Name=WP_002231164.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002231164.1;transl_table=11 NC_005815.1 RefSeq gene 40708 43023 . - . ID=gene4355;Name=YP_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21845;old_locus_tag=pMT047%2CYP_pMT047 NC_005815.1 Protein Homology CDS 40708 43023 . - 0 ID=cds4254;Parent=gene4355;Dbxref=Genbank:WP_011172033.1;Name=WP_011172033.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_011172033.1;transl_table=11 NC_005815.1 RefSeq gene 43101 43670 . - . ID=gene4356;Name=YP_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21850;old_locus_tag=pMT048%2CYP_pMT048 NC_005815.1 Protein Homology CDS 43101 43670 . - 0 ID=cds4255;Parent=gene4356;Dbxref=Genbank:WP_002214145.1;Name=WP_002214145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214145.1;transl_table=11 NC_005815.1 RefSeq gene 43683 44429 . - . ID=gene4357;Name=YP_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21855;old_locus_tag=pMT049%2CYP_pMT049 NC_005815.1 Protein Homology CDS 43683 44429 . - 0 ID=cds4256;Parent=gene4357;Dbxref=Genbank:WP_002213303.1;Name=WP_002213303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213303.1;transl_table=11 NC_005815.1 RefSeq gene 44419 46335 . - . ID=gene4358;Name=YP_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21860;old_locus_tag=pMT050%2CYP_pMT050 NC_005815.1 Protein Homology CDS 44419 46335 . - 0 ID=cds4257;Parent=gene4358;Dbxref=Genbank:WP_002214148.1;Name=WP_002214148.1;gbkey=CDS;product=exonuclease;protein_id=WP_002214148.1;transl_table=11 NC_005815.1 RefSeq gene 46344 46568 . - . ID=gene4359;Name=YP_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21865;old_locus_tag=pMT051%2CYP_pMT051 NC_005815.1 Protein Homology CDS 46344 46568 . - 0 ID=cds4258;Parent=gene4359;Dbxref=Genbank:WP_002228794.1;Name=WP_002228794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228794.1;transl_table=11 NC_005815.1 RefSeq gene 46565 47650 . - . ID=gene4360;Name=YP_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21870;old_locus_tag=pMT052%2CYP_pMT052 NC_005815.1 Protein Homology CDS 46565 47650 . - 0 ID=cds4259;Parent=gene4360;Dbxref=Genbank:WP_002213300.1;Name=WP_002213300.1;gbkey=CDS;product=exonuclease;protein_id=WP_002213300.1;transl_table=11 NC_005815.1 RefSeq gene 47799 47987 . + . ID=gene4361;Name=YP_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21875 NC_005815.1 Protein Homology CDS 47799 47987 . + 0 ID=cds4260;Parent=gene4361;Dbxref=Genbank:WP_002214154.1;Name=WP_002214154.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214154.1;transl_table=11 NC_005815.1 RefSeq gene 48066 49088 . + . ID=gene4362;Name=YP_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21880;old_locus_tag=pMT054%2CYP_pMT054 NC_005815.1 Protein Homology CDS 48066 49088 . + 0 ID=cds4261;Parent=gene4362;Dbxref=Genbank:WP_002213298.1;Name=WP_002213298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213298.1;transl_table=11 NC_005815.1 RefSeq gene 49226 49372 . - . ID=gene4363;Name=YP_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21885;old_locus_tag=pMT055%2CYP_pMT055 NC_005815.1 Protein Homology CDS 49226 49372 . - 0 ID=cds4262;Parent=gene4363;Dbxref=Genbank:WP_002214158.1;Name=WP_002214158.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214158.1;transl_table=11 NC_005815.1 RefSeq gene 49448 49672 . - . ID=gene4364;Name=YP_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21890 NC_005815.1 Protein Homology CDS 49448 49672 . - 0 ID=cds4263;Parent=gene4364;Dbxref=Genbank:WP_002389821.1;Name=WP_002389821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002389821.1;transl_table=11 NC_005815.1 RefSeq gene 50857 51921 . + . ID=gene4365;Name=YP_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21895;old_locus_tag=pMT057%2CYP_pMT057 NC_005815.1 Protein Homology CDS 50857 51921 . + 0 ID=cds4264;Parent=gene4365;Dbxref=Genbank:WP_002214164.1;Name=WP_002214164.1;gbkey=CDS;product=replication protein RepA;protein_id=WP_002214164.1;transl_table=11 NC_005815.1 RefSeq gene 52490 52702 . - . ID=gene4366;Name=YP_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21900;old_locus_tag=pMT058%2CYP_pMT058 NC_005815.1 Protein Homology CDS 52490 52702 . - 0 ID=cds4265;Parent=gene4366;Dbxref=Genbank:WP_002222711.1;Name=WP_002222711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222711.1;transl_table=11 NC_005815.1 RefSeq gene 52702 53037 . - . ID=gene4367;Name=YP_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21905;old_locus_tag=pMT059%2CYP_pMT059 NC_005815.1 Protein Homology CDS 52702 53037 . - 0 ID=cds4266;Parent=gene4367;Dbxref=Genbank:WP_002227818.1;Name=WP_002227818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227818.1;transl_table=11 NC_005815.1 RefSeq gene 53034 53213 . - . ID=gene4368;Name=YP_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21910;old_locus_tag=pMT060%2CYP_pMT060 NC_005815.1 Protein Homology CDS 53034 53213 . - 0 ID=cds4267;Parent=gene4368;Dbxref=Genbank:WP_002228796.1;Name=WP_002228796.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228796.1;transl_table=11 NC_005815.1 RefSeq gene 53254 53529 . - . ID=gene4369;Name=YP_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21915;old_locus_tag=pMT061%2CYP_pMT061 NC_005815.1 Protein Homology CDS 53254 53529 . - 0 ID=cds4268;Parent=gene4369;Dbxref=Genbank:WP_002228797.1;Name=WP_002228797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228797.1;transl_table=11 NC_005815.1 RefSeq gene 53597 54007 . - . ID=gene4370;Name=YP_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21920;old_locus_tag=pMT062%2CYP_pMT062 NC_005815.1 Protein Homology CDS 53597 54007 . - 0 ID=cds4269;Parent=gene4370;Dbxref=Genbank:WP_002222869.1;Name=WP_002222869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222869.1;transl_table=11 NC_005815.1 RefSeq gene 53991 54362 . - . ID=gene4371;Name=YP_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21925;old_locus_tag=pMT063%2CYP_pMT063 NC_005815.1 Protein Homology CDS 53991 54362 . - 0 ID=cds4270;Parent=gene4371;Dbxref=Genbank:WP_002222868.1;Name=WP_002222868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222868.1;transl_table=11 NC_005815.1 RefSeq gene 54516 55346 . - . ID=gene4372;Name=YP_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21930;old_locus_tag=pMT064%2CYP_pMT064 NC_005815.1 Protein Homology CDS 54516 55346 . - 0 ID=cds4271;Parent=gene4372;Dbxref=Genbank:WP_002222866.1;Name=WP_002222866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222866.1;transl_table=11 NC_005815.1 RefSeq gene 55350 55550 . - . ID=gene4373;Name=YP_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21935;old_locus_tag=pMT065%2CYP_pMT065 NC_005815.1 Protein Homology CDS 55350 55550 . - 0 ID=cds4272;Parent=gene4373;Dbxref=Genbank:WP_002213439.1;Name=WP_002213439.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213439.1;transl_table=11 NC_005815.1 RefSeq gene 55641 56717 . - . ID=gene4374;Name=YP_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21940;old_locus_tag=pMT066%2CYP_pMT066 NC_005815.1 Protein Homology CDS 55641 56717 . - 0 ID=cds4273;Parent=gene4374;Dbxref=Genbank:WP_002213437.1;Name=WP_002213437.1;gbkey=CDS;product=recombinase;protein_id=WP_002213437.1;transl_table=11 NC_005815.1 RefSeq gene 56720 56986 . - . ID=gene4375;Name=YP_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21945;old_locus_tag=pMT067%2CYP_pMT067 NC_005815.1 Protein Homology CDS 56720 56986 . - 0 ID=cds4274;Parent=gene4375;Dbxref=Genbank:WP_000920226.1;Name=WP_000920226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000920226.1;transl_table=11 NC_005815.1 RefSeq gene 56986 57930 . - . ID=gene4376;Name=YP_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21950;old_locus_tag=pMT068%2CYP_pMT068 NC_005815.1 Protein Homology CDS 56986 57930 . - 0 ID=cds4275;Parent=gene4376;Dbxref=Genbank:WP_002225551.1;Name=WP_002225551.1;gbkey=CDS;product=exonuclease;protein_id=WP_002225551.1;transl_table=11 NC_005815.1 RefSeq gene 57991 59019 . - . ID=gene4377;Name=YP_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21955;old_locus_tag=pMT069%2CYP_pMT069 NC_005815.1 Protein Homology CDS 57991 59019 . - 0 ID=cds4276;Parent=gene4377;Dbxref=Genbank:WP_002213132.1;Name=WP_002213132.1;gbkey=CDS;product=regulator;protein_id=WP_002213132.1;transl_table=11 NC_005815.1 RefSeq gene 59139 59570 . - . ID=gene4378;Name=YP_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21960;old_locus_tag=pMT070%2CYP_pMT070 NC_005815.1 Protein Homology CDS 59139 59570 . - 0 ID=cds4277;Parent=gene4378;Dbxref=Genbank:WP_002213135.1;Name=WP_002213135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213135.1;transl_table=11 NC_005815.1 RefSeq gene 59791 60042 . + . ID=gene4379;Name=YP_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21965 NC_005815.1 Protein Homology CDS 59791 60042 . + 0 ID=cds4278;Parent=gene4379;Dbxref=Genbank:WP_002215095.1;Name=WP_002215095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215095.1;transl_table=11 NC_005815.1 RefSeq gene 60115 60678 . + . ID=gene4380;Name=YP_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21970;old_locus_tag=pMT071%2CYP_pMT071 NC_005815.1 Protein Homology CDS 60115 60678 . + 0 ID=cds4279;Parent=gene4380;Dbxref=Genbank:WP_002213141.1;Name=WP_002213141.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002213141.1;transl_table=11 NC_005815.1 RefSeq gene 60708 61151 . - . ID=gene4381;Name=YP_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21975;old_locus_tag=pMT072%2CYP_pMT072 NC_005815.1 Protein Homology CDS 60708 61151 . - 0 ID=cds4280;Parent=gene4381;Dbxref=Genbank:WP_002213143.1;Name=WP_002213143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213143.1;transl_table=11 NC_005815.1 RefSeq gene 61148 61642 . - . ID=gene4382;Name=YP_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21980 NC_005815.1 Protein Homology CDS 61148 61642 . - 0 ID=cds4281;Parent=gene4382;Dbxref=Genbank:WP_042593456.1;Name=WP_042593456.1;gbkey=CDS;product=DNA polymerase III;protein_id=WP_042593456.1;transl_table=11 NC_005815.1 RefSeq repeat_region 61976 63929 . + . ID=id886;gbkey=repeat_region NC_005815.1 RefSeq region 61976 63929 . + . ID=id887;gbkey=mobile_element NC_005815.1 RefSeq gene 62062 63084 . + . ID=gene4383;Name=YP_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21985;old_locus_tag=pMT074%2CYP_pMT074 NC_005815.1 Protein Homology CDS 62062 63084 . + 0 ID=cds4282;Parent=gene4383;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005815.1 RefSeq gene 63084 63863 . + . ID=gene4384;Name=YP_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21990;old_locus_tag=pMT075%2CYP_pMT075 NC_005815.1 Protein Homology CDS 63084 63863 . + 0 ID=cds4283;Parent=gene4384;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005815.1 RefSeq gene 63914 66631 . - . ID=gene4385;Name=YP_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS21995 NC_005815.1 Protein Homology CDS 63914 66631 . - 0 ID=cds4284;Parent=gene4385;Dbxref=Genbank:WP_002231173.1;Name=WP_002231173.1;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=WP_002231173.1;transl_table=11 NC_005815.1 RefSeq gene 66812 68047 . - . ID=gene4386;Name=YP_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22000;old_locus_tag=pMT076%2CYP_pMT076 NC_005815.1 Protein Homology CDS 66812 68047 . - 0 ID=cds4285;Parent=gene4386;Dbxref=Genbank:WP_002211767.1;Name=WP_002211767.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211767.1;transl_table=11 NC_005815.1 RefSeq gene 68144 70510 . - . ID=gene4387;Name=YP_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22005;old_locus_tag=pMT077%2CYP_pMT077 NC_005815.1 Protein Homology CDS 68144 70510 . - 0 ID=cds4286;Parent=gene4387;Dbxref=Genbank:WP_002211766.1;Name=WP_002211766.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211766.1;transl_table=11 NC_005815.1 RefSeq gene 70620 70832 . - . ID=gene4388;Name=YP_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22010;old_locus_tag=pMT078%2CYP_pMT078 NC_005815.1 Protein Homology CDS 70620 70832 . - 0 ID=cds4287;Parent=gene4388;Dbxref=Genbank:WP_002228800.1;Name=WP_002228800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228800.1;transl_table=11 NC_005815.1 RefSeq gene 71095 71481 . + . ID=gene4389;Name=YP_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22015;old_locus_tag=pMT080%2CYP_pMT080 NC_005815.1 Protein Homology CDS 71095 71481 . + 0 ID=cds4288;Parent=gene4389;Dbxref=Genbank:WP_002228802.1;Name=WP_002228802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228802.1;transl_table=11 NC_005815.1 RefSeq gene 71476 72579 . - . ID=gene4390;Name=YP_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22020;old_locus_tag=pMT081%2CYP_pMT081 NC_005815.1 Protein Homology CDS 71476 72579 . - 0 ID=cds4289;Parent=gene4390;Dbxref=Genbank:WP_002353208.1;Name=WP_002353208.1;gbkey=CDS;product=integrase;protein_id=WP_002353208.1;transl_table=11 NC_005815.1 RefSeq gene 73340 73852 . - . ID=gene4391;Name=YP_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22025;old_locus_tag=pMT082%2CYP_pMT082 NC_005815.1 Protein Homology CDS 73340 73852 . - 0 ID=cds4290;Parent=gene4391;Dbxref=Genbank:WP_002216410.1;Name=WP_002216410.1;gbkey=CDS;product=F1 capsule antigen;protein_id=WP_002216410.1;transl_table=11 NC_005815.1 RefSeq gene 73933 76434 . - . ID=gene4392;Name=YP_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22030;old_locus_tag=pMT083%2CYP_pMT083 NC_005815.1 Protein Homology CDS 73933 76434 . - 0 ID=cds4291;Parent=gene4392;Dbxref=Genbank:WP_002211763.1;Name=WP_002211763.1;gbkey=CDS;product=F1 capsule-anchoring protein;protein_id=WP_002211763.1;transl_table=11 NC_005815.1 RefSeq gene 76459 77235 . - . ID=gene4393;Name=YP_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22035;old_locus_tag=pMT084%2CYP_pMT084 NC_005815.1 Protein Homology CDS 76459 77235 . - 0 ID=cds4292;Parent=gene4393;Dbxref=Genbank:WP_002211762.1;Name=WP_002211762.1;gbkey=CDS;product=chaperone protein caf1M;protein_id=WP_002211762.1;transl_table=11 NC_005815.1 RefSeq gene 77563 78468 . + . ID=gene4394;Name=YP_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22040;old_locus_tag=pMT085%2CYP_pMT085 NC_005815.1 Protein Homology CDS 77563 78468 . + 0 ID=cds4293;Parent=gene4394;Dbxref=Genbank:WP_002211761.1;Name=WP_002211761.1;gbkey=CDS;product=F1 operon positive regulatory protein;protein_id=WP_002211761.1;transl_table=11 NC_005815.1 RefSeq gene 78983 79288 . - . ID=gene4395;Name=YP_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22045;old_locus_tag=pMT086%2CYP_pMT086 NC_005815.1 Protein Homology CDS 78983 79288 . - 0 ID=cds4294;Parent=gene4395;Dbxref=Genbank:WP_002224363.1;Name=WP_002224363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224363.1;transl_table=11 NC_005815.1 RefSeq gene 79434 79649 . - . ID=gene4396;Name=YP_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22050;old_locus_tag=pMT088%2CYP_pMT088 NC_005815.1 Protein Homology CDS 79434 79649 . - 0 ID=cds4295;Parent=gene4396;Dbxref=Genbank:WP_002224361.1;Name=WP_002224361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224361.1;transl_table=11 NC_005815.1 RefSeq gene 79809 81131 . - . ID=gene4397;Name=YP_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22055;old_locus_tag=pMT090%2CYP_pMT090 NC_005815.1 Protein Homology CDS 79809 81131 . - 0 ID=cds4296;Parent=gene4397;Dbxref=Genbank:WP_002231172.1;Name=WP_002231172.1;gbkey=CDS;product=DNA ligase;protein_id=WP_002231172.1;transl_table=11 NC_005815.1 RefSeq gene 81166 81423 . - . ID=gene4398;Name=YP_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22060 NC_005815.1 Protein Homology CDS 81166 81423 . - 0 ID=cds4297;Parent=gene4398;Dbxref=Genbank:WP_016256030.1;Name=WP_016256030.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256030.1;transl_table=11 NC_005815.1 RefSeq gene 81724 81921 . - . ID=gene4399;Name=YP_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22065;old_locus_tag=pMT094%2CYP_pMT094 NC_005815.1 Protein Homology CDS 81724 81921 . - 0 ID=cds4298;Parent=gene4399;Dbxref=Genbank:WP_025471067.1;Name=WP_025471067.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025471067.1;transl_table=11 NC_005815.1 RefSeq repeat_region 81916 83869 . + . ID=id888;gbkey=repeat_region NC_005815.1 RefSeq region 81916 83869 . - . ID=id889;gbkey=mobile_element NC_005815.1 RefSeq gene 81982 82761 . - . ID=gene4400;Name=YP_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22070;old_locus_tag=pMT095%2CYP_pMT095 NC_005815.1 Protein Homology CDS 81982 82761 . - 0 ID=cds4299;Parent=gene4400;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005815.1 RefSeq gene 82761 83783 . - . ID=gene4401;Name=YP_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22075;old_locus_tag=pMT096%2CYP_pMT096 NC_005815.1 Protein Homology CDS 82761 83783 . - 0 ID=cds4300;Parent=gene4401;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005815.1 RefSeq gene 83907 85916 . - . ID=gene4402;Name=YP_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22080;old_locus_tag=pMT097%2CYP_pMT097 NC_005815.1 Protein Homology CDS 83907 85916 . - 0 ID=cds4301;Parent=gene4402;Dbxref=Genbank:WP_002211744.1;Name=WP_002211744.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211744.1;transl_table=11 NC_005815.1 RefSeq gene 85989 86219 . - . ID=gene4403;Name=YP_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22085;old_locus_tag=pMT098%2CYP_pMT098 NC_005815.1 Protein Homology CDS 85989 86219 . - 0 ID=cds4302;Parent=gene4403;Dbxref=Genbank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211745.1;transl_table=11 NC_005815.1 RefSeq gene 87008 87514 . - . ID=gene4404;Name=YP_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22090;old_locus_tag=pMT100%2CYP_pMT100 NC_005815.1 Protein Homology CDS 87008 87514 . - 0 ID=cds4303;Parent=gene4404;Dbxref=Genbank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_002211746.1;transl_table=11 NC_005815.1 RefSeq gene 87913 88692 . - . ID=gene4405;Name=YP_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22095;old_locus_tag=pMT102%2CYP_pMT102 NC_005815.1 Protein Homology CDS 87913 88692 . - 0 ID=cds4304;Parent=gene4405;Dbxref=Genbank:WP_002211747.1;Name=WP_002211747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211747.1;transl_table=11 NC_005815.1 RefSeq gene 88746 89165 . - . ID=gene4406;Name=YP_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22100;old_locus_tag=pMT103%2CYP_pMT103 NC_005815.1 Protein Homology CDS 88746 89165 . - 0 ID=cds4305;Parent=gene4406;Dbxref=Genbank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215082.1;transl_table=11 NC_005815.1 RefSeq gene 89176 89397 . - . ID=gene4407;Name=YP_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22105;old_locus_tag=pMT104%2CYP_pMT104 NC_005815.1 Protein Homology CDS 89176 89397 . - 0 ID=cds4306;Parent=gene4407;Dbxref=Genbank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211748.1;transl_table=11 NC_005815.1 RefSeq gene 89397 90074 . - . ID=gene4408;Name=YP_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22110;old_locus_tag=pMT105%2CYP_pMT105 NC_005815.1 Protein Homology CDS 89397 90074 . - 0 ID=cds4307;Parent=gene4408;Dbxref=Genbank:WP_002211749.1;Name=WP_002211749.1;gbkey=CDS;product=methylase;protein_id=WP_002211749.1;transl_table=11 NC_005815.1 RefSeq gene 90575 90775 . + . ID=gene4409;Name=YP_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22115;old_locus_tag=pMT108 NC_005815.1 Protein Homology CDS 90575 90775 . + 0 ID=cds4308;Parent=gene4409;Dbxref=Genbank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11 NC_005815.1 RefSeq gene 90937 92334 . - . ID=gene4410;Name=YP_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22120;old_locus_tag=pMT109%2CYP_pMT109 NC_005815.1 Protein Homology CDS 90937 92334 . - 0 ID=cds4309;Parent=gene4410;Dbxref=Genbank:WP_002228775.1;Name=WP_002228775.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228775.1;transl_table=11 NC_005815.1 RefSeq gene 92713 93684 . - . ID=gene4411;Name=YP_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22125;old_locus_tag=pMT112%2CYP_pMT112 NC_005815.1 Protein Homology CDS 92713 93684 . - 0 ID=cds4310;Parent=gene4411;Dbxref=Genbank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002215070.1;transl_table=11 NC_005815.1 RefSeq gene 93681 94886 . - . ID=gene4412;Name=YP_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22130;old_locus_tag=pMT113%2CYP_pMT113 NC_005815.1 Protein Homology CDS 93681 94886 . - 0 ID=cds4311;Parent=gene4412;Dbxref=Genbank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002211752.1;transl_table=11 NC_005815.1 RefSeq gene 95188 95415 . + . ID=gene4413;Name=YP_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22135;old_locus_tag=pMT114%2CYP_pMT114 NC_005815.1 Protein Homology CDS 95188 95415 . + 0 ID=cds4312;Parent=gene4413;Dbxref=Genbank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;product=prevent-host-death protein;protein_id=WP_002211753.1;transl_table=11 NC_005815.1 RefSeq gene 95415 95741 . + . ID=gene4414;Name=YP_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22140;old_locus_tag=pMT115%2CYP_pMT115 NC_005815.1 Protein Homology CDS 95415 95741 . + 0 ID=cds4313;Parent=gene4414;Dbxref=Genbank:WP_002215068.1;Name=WP_002215068.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002215068.1;transl_table=11 NC_005815.1 RefSeq gene 95941 96561 . + . ID=gene4415;Name=YP_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22145;old_locus_tag=pMT116%2CYP_pMT116 NC_005815.1 Protein Homology CDS 95941 96561 . + 0 ID=cds4314;Parent=gene4415;Dbxref=Genbank:WP_002211754.1;Name=WP_002211754.1;gbkey=CDS;product=serine recombinase;protein_id=WP_002211754.1;transl_table=11 NC_005815.1 RefSeq gene 96627 97568 . + . ID=gene4416;Name=YP_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22150;old_locus_tag=pMT117%2CYP_pMT117 NC_005815.1 Protein Homology CDS 96627 97568 . + 0 ID=cds4315;Parent=gene4416;Dbxref=Genbank:WP_002215065.1;Name=WP_002215065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215065.1;transl_table=11 NC_005815.1 RefSeq gene 97591 97866 . - . ID=gene4417;Name=YP_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22155;old_locus_tag=pMT118%2CYP_pMT118 NC_005815.1 Protein Homology CDS 97591 97866 . - 0 ID=cds4316;Parent=gene4417;Dbxref=Genbank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11 NC_005815.1 RefSeq gene 98488 100251 . + . ID=gene4418;Name=YP_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22160;old_locus_tag=pMT119%2CYP_pMT119 NC_005815.1 Protein Homology CDS 98488 100251 . + 0 ID=cds4317;Parent=gene4418;Dbxref=Genbank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211758.1;transl_table=11 NC_005815.1 RefSeq gene 100496 100951 . - . ID=gene4419;Name=YP_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22165;old_locus_tag=pMT120%2CYP_pMT120 NC_005815.1 Protein Homology CDS 100496 100951 . - 0 ID=cds4318;Parent=gene4419;Dbxref=Genbank:WP_002353217.1;Name=WP_002353217.1;gbkey=CDS;product=reverse transcriptase;protein_id=WP_002353217.1;transl_table=11 NC_005815.1 RefSeq gene 101037 101345 . + . ID=gene4420;Name=YP_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22170;old_locus_tag=pMT121%2CYP_pMT121 NC_005815.1 Protein Homology CDS 101037 101345 . + 0 ID=cds4319;Parent=gene4420;Dbxref=Genbank:WP_002228773.1;Name=WP_002228773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228773.1;transl_table=11 NC_005815.1 RefSeq gene 101260 101631 . + . ID=gene4421;Name=YP_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22175;old_locus_tag=pMT122%2CYP_pMT122 NC_005815.1 Protein Homology CDS 101260 101631 . + 0 ID=cds4320;Parent=gene4421;Dbxref=Genbank:WP_002228772.1;Name=WP_002228772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228772.1;transl_table=11 NC_005815.1 RefSeq gene 101811 102128 . + . ID=gene4422;Name=YP_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22180;old_locus_tag=pMT124%2CYP_pMT124 NC_005815.1 Protein Homology CDS 101811 102128 . + 0 ID=cds4321;Parent=gene4422;Dbxref=Genbank:WP_002216421.1;Name=WP_002216421.1;gbkey=CDS;product=transposase;protein_id=WP_002216421.1;transl_table=11 NC_005815.1 RefSeq gene 102327 103349 . - . ID=gene4423;Name=YP_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22185;old_locus_tag=pMT125%2CYP_pMT125 NC_005815.1 Protein Homology CDS 102327 103349 . - 0 ID=cds4322;Parent=gene4423;Dbxref=Genbank:WP_002211760.1;Name=WP_002211760.1;gbkey=CDS;product=transposase;protein_id=WP_002211760.1;transl_table=11 NC_005815.1 RefSeq gene 103509 103688 . - . ID=gene4424;Name=YP_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22190 NC_005815.1 Protein Homology CDS 103509 103688 . - 0 ID=cds4323;Parent=gene4424;Dbxref=Genbank:WP_002216419.1;Name=WP_002216419.1;gbkey=CDS;product=DNA helicase;protein_id=WP_002216419.1;transl_table=11 NC_005815.1 RefSeq region 103783 105097 . - . ID=id890;Note=contains transposase%2C IS111A/IS1328/IS1533 (Interpro|IPR002525)%3B contains transposase IS116/IS110/IS902 (Interpro|IPR003346%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: transposase (GO:0004803)%2C Biological Process: DNA transposition (GO:0006313));gbkey=mobile_element NC_005815.1 RefSeq gene 103818 105026 . - . ID=gene4425;Name=YP_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22195;old_locus_tag=pMT126%2CYP_pMT126 NC_005815.1 Protein Homology CDS 103818 105026 . - 0 ID=cds4324;Parent=gene4425;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_005815.1 RefSeq gene 105060 105782 . - . ID=gene4426;Name=YP_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22200;old_locus_tag=pMT127%2CYP_pMT127 NC_005815.1 Protein Homology CDS 105060 105782 . - 0 ID=cds4325;Parent=gene4426;Dbxref=Genbank:WP_002224263.1;Name=WP_002224263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224263.1;transl_table=11 ##sequence-region NC_005816.1 1 9609 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=229193 NC_005816.1 RefSeq region 1 9609 . + . ID=id891;Dbxref=taxon:229193;Is_circular=true;Name=pPCP1;biovar=Microtus;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pPCP1;strain=91001;sub-species=microtus NC_005816.1 RefSeq region 1 1954 . + . ID=id892;gbkey=mobile_element NC_005816.1 RefSeq gene 87 1109 . + . ID=gene4427;Name=YP_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22210;old_locus_tag=pPCP01%2CYP_pPCP01 NC_005816.1 Protein Homology CDS 87 1109 . + 0 ID=cds4326;Parent=gene4427;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_005816.1 RefSeq gene 1109 1888 . + . ID=gene4428;Name=YP_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22215;old_locus_tag=pPCP02%2CYP_pPCP02 NC_005816.1 Protein Homology CDS 1109 1888 . + 0 ID=cds4327;Parent=gene4428;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_005816.1 RefSeq gene 2925 3119 . + . ID=gene4429;Name=YP_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22220;old_locus_tag=pPCP03%2CYP_pPCP03 NC_005816.1 Protein Homology CDS 2925 3119 . + 0 ID=cds4328;Parent=gene4429;Dbxref=Genbank:WP_002213433.1;Name=WP_002213433.1;gbkey=CDS;product=rop protein;protein_id=WP_002213433.1;transl_table=11 NC_005816.1 RefSeq gene 4355 4780 . + . ID=gene4430;Name=YP_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22225;old_locus_tag=pPCP05%2CYP_pPCP05 NC_005816.1 Protein Homology CDS 4355 4780 . + 0 ID=cds4329;Parent=gene4430;Dbxref=Genbank:WP_002218512.1;Name=WP_002218512.1;gbkey=CDS;product=pesticin immunity protein;protein_id=WP_002218512.1;transl_table=11 NC_005816.1 RefSeq gene 4815 5888 . - . ID=gene4431;Name=YP_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22230;old_locus_tag=pPCP06%2CYP_pPCP06 NC_005816.1 Protein Homology CDS 4815 5888 . - 0 ID=cds4330;Parent=gene4431;Dbxref=Genbank:WP_002218509.1;Name=WP_002218509.1;gbkey=CDS;product=peptidase;protein_id=WP_002218509.1;transl_table=11 NC_005816.1 RefSeq gene 6116 6421 . + . ID=gene4432;Name=YP_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22235;old_locus_tag=pPCP07 NC_005816.1 Protein Homology CDS 6116 6421 . + 0 ID=cds4331;Parent=gene4432;Dbxref=Genbank:WP_002221218.1;Name=WP_002221218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221218.1;transl_table=11 NC_005816.1 RefSeq gene 6664 7602 . + . ID=gene4433;Name=YP_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22240;old_locus_tag=pPCP08%2CYP_pPCP08 NC_005816.1 Protein Homology CDS 6664 7602 . + 0 ID=cds4332;Parent=gene4433;Dbxref=Genbank:WP_002231174.1;Name=WP_002231174.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_002231174.1;transl_table=11 NC_005816.1 RefSeq gene 7789 8088 . - . ID=gene4434;Name=YP_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22245;old_locus_tag=pPCP09%2CYP_pPCP09 NC_005816.1 Protein Homology CDS 7789 8088 . - 0 ID=cds4333;Parent=gene4434;Dbxref=Genbank:WP_002213446.1;Name=WP_002213446.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213446.1;transl_table=11 NC_005816.1 RefSeq gene 8088 8429 . - . ID=gene4435;Name=YP_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22250;old_locus_tag=pPCP10 NC_005816.1 Protein Homology CDS 8088 8429 . - 0 ID=cds4334;Parent=gene4435;Dbxref=Genbank:WP_002225538.1;Name=WP_002225538.1;gbkey=CDS;product=toxin RelE;protein_id=WP_002225538.1;transl_table=11 NC_005816.1 RefSeq gene 9132 9347 . - . ID=gene4436;Name=YP_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YP_RS22255 NC_005816.1 Protein Homology CDS 9132 9347 . - 0 ID=cds4335;Parent=gene4436;Dbxref=Genbank:WP_002213461.1;Name=WP_002213461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213461.1;transl_table=11 ###