locus-tag class description CH60_RS00060 PF00905 Penicillin binding protein transpeptidase domain CH60_RS00060 PF00912 Transglycosylase CH60_RS00060 PF17092 Penicillin-binding protein OB-like domain CH60_RS00215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH60_RS00215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS00220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH60_RS00220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS00285 PF03631 Virulence factor BrkB CH60_RS00335 PF05193 Peptidase M16 inactive domain CH60_RS00335 PF00675 Insulinase (Peptidase family M16) CH60_RS00340 PF00675 Insulinase (Peptidase family M16) CH60_RS00340 PF05193 Peptidase M16 inactive domain CH60_RS00370 PF06917 Periplasmic pectate lyase CH60_RS00540 PF00196 Bacterial regulatory proteins, luxR family CH60_RS00540 PF17874 MalT-like TPR region CH60_RS00565 PF02446 4-alpha-glucanotransferase CH60_RS00800 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CH60_RS00800 PF00413 Matrixin CH60_RS00800 PF08548 Peptidase M10 serralysin C terminal CH60_RS01015 PF17154 Gammaproteobacterial periplasmic sensor domain CH60_RS01015 PF00990 Diguanylate cyclase, GGDEF domain CH60_RS01015 PF00672 HAMP domain CH60_RS01015 PF00563 EAL domain CH60_RS01025 PF01270 Glycosyl hydrolases family 8 CH60_RS01090 PF07690 Major Facilitator Superfamily CH60_RS01100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS01100 PF07730 Histidine kinase CH60_RS01100 PF05231 MASE1 CH60_RS01140 PF00486 Transcriptional regulatory protein, C terminal CH60_RS01140 PF00072 Response regulator receiver domain CH60_RS01150 PF01116 Fructose-bisphosphate aldolase class-II CH60_RS01160 PF13407 Periplasmic binding protein domain CH60_RS01165 PF02653 Branched-chain amino acid transport system / permease component CH60_RS01170 PF00005 ABC transporter CH60_RS01175 PF00072 Response regulator receiver domain CH60_RS01175 PF13188 PAS domain CH60_RS01175 PF08448 PAS fold CH60_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS01175 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS01185 PF01384 Phosphate transporter family CH60_RS01195 PF10625 Universal stress protein B (UspB) CH60_RS01200 PF00582 Universal stress protein family CH60_RS01205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CH60_RS01205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH60_RS01210 PF08548 Peptidase M10 serralysin C terminal CH60_RS01210 PF00413 Matrixin CH60_RS01210 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CH60_RS01215 PF04445 Putative SAM-dependent methyltransferase CH60_RS01220 PF01432 Peptidase family M3 CH60_RS01225 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CH60_RS01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH60_RS01235 PF13556 PucR C-terminal helix-turn-helix domain CH60_RS01235 PF17853 GGDEF-like domain CH60_RS01235 PF05651 Putative sugar diacid recognition CH60_RS01240 PF02447 GntP family permease CH60_RS01245 PF02595 Glycerate kinase family CH60_RS01270 PF03631 Virulence factor BrkB CH60_RS01275 PF02611 CDP-diacylglycerol pyrophosphatase CH60_RS01280 PF05170 AsmA family CH60_RS01285 PF00563 EAL domain CH60_RS01290 PF01361 Tautomerase enzyme CH60_RS01295 PF00294 pfkB family carbohydrate kinase CH60_RS01300 PF00675 Insulinase (Peptidase family M16) CH60_RS01300 PF05193 Peptidase M16 inactive domain CH60_RS01305 PF00375 Sodium:dicarboxylate symporter family CH60_RS01315 PF06917 Periplasmic pectate lyase CH60_RS01320 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH60_RS01325 PF00563 EAL domain CH60_RS01325 PF17154 Gammaproteobacterial periplasmic sensor domain CH60_RS01325 PF00672 HAMP domain CH60_RS01325 PF00990 Diguanylate cyclase, GGDEF domain CH60_RS01330 PF01270 Glycosyl hydrolases family 8 CH60_RS01335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS01335 PF00005 ABC transporter CH60_RS01340 PF00005 ABC transporter CH60_RS01340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS01345 PF12911 N-terminal TM domain of oligopeptide transport permease C CH60_RS01350 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS01355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS01365 PF17287 POTRA domain CH60_RS01365 PF08479 POTRA domain, ShlB-type CH60_RS01365 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH60_RS01370 PF05594 Haemagluttinin repeat CH60_RS01370 PF04829 Pre-toxin domain with VENN motif CH60_RS01370 PF05860 haemagglutination activity domain CH60_RS01370 PF13332 Hemagglutinin repeat CH60_RS01380 PF07690 Major Facilitator Superfamily CH60_RS01385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS01385 PF07730 Histidine kinase CH60_RS01385 PF05231 MASE1 CH60_RS01390 PF00072 Response regulator receiver domain CH60_RS01390 PF00196 Bacterial regulatory proteins, luxR family CH60_RS01395 PF08019 Phosphoethanolamine transferase EptA/EptB CH60_RS01395 PF00884 Sulfatase CH60_RS01400 PF12146 Serine aminopeptidase, S33 CH60_RS01405 PF00324 Amino acid permease CH60_RS01410 PF01695 IstB-like ATP binding protein CH60_RS01415 PF02796 Helix-turn-helix domain of resolvase CH60_RS01415 PF00665 Integrase core domain CH60_RS01420 PF13333 Integrase core domain CH60_RS01420 PF00665 Integrase core domain CH60_RS01420 PF13276 HTH-like domain CH60_RS01430 PF08220 DeoR-like helix-turn-helix domain CH60_RS01430 PF00455 DeoR C terminal sensor domain CH60_RS01435 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CH60_RS01435 PF01694 Rhomboid family CH60_RS01440 PF00581 Rhodanese-like domain CH60_RS01445 PF00196 Bacterial regulatory proteins, luxR family CH60_RS01445 PF17874 MalT-like TPR region CH60_RS01450 PF00343 Carbohydrate phosphorylase CH60_RS01460 PF02446 4-alpha-glucanotransferase CH60_RS01465 PF01106 NifU-like domain CH60_RS01465 PF01521 Iron-sulphur cluster biosynthesis CH60_RS01470 PF00156 Phosphoribosyl transferase domain CH60_RS01475 PF00561 alpha/beta hydrolase fold CH60_RS01480 PF07338 Protein of unknown function (DUF1471) CH60_RS01485 PF09012 FeoC like transcriptional regulator CH60_RS01490 PF07664 Ferrous iron transport protein B C terminus CH60_RS01490 PF17910 FeoB cytosolic helical domain CH60_RS01490 PF02421 Ferrous iron transport protein B CH60_RS01490 PF07670 Nucleoside recognition CH60_RS01495 PF04023 FeoA domain CH60_RS01505 PF17674 HHH domain CH60_RS01505 PF00575 S1 RNA binding domain CH60_RS01505 PF09371 Tex-like protein N-terminal domain CH60_RS01505 PF16921 Tex protein YqgF-like domain CH60_RS01510 PF01272 Transcription elongation factor, GreA/GreB, C-term CH60_RS01510 PF03449 Transcription elongation factor, N-terminal CH60_RS01515 PF00072 Response regulator receiver domain CH60_RS01515 PF00486 Transcriptional regulatory protein, C terminal CH60_RS01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS01520 PF00672 HAMP domain CH60_RS01520 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS01525 PF01293 Phosphoenolpyruvate carboxykinase CH60_RS01530 PF01430 Hsp33 protein CH60_RS01535 PF01479 S4 domain CH60_RS01540 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS01545 PF07095 Intracellular growth attenuator protein IgaA CH60_RS01555 PF00293 NUDIX domain CH60_RS01560 PF00912 Transglycosylase CH60_RS01560 PF00905 Penicillin binding protein transpeptidase domain CH60_RS01560 PF17092 Penicillin-binding protein OB-like domain CH60_RS01590 PF03958 Bacterial type II/III secretion system short domain CH60_RS01590 PF00263 Bacterial type II and III secretion system protein CH60_RS01595 PF01202 Shikimate kinase CH60_RS01600 PF01761 3-dehydroquinate synthase CH60_RS01605 PF05036 Sporulation related domain CH60_RS01610 PF02086 D12 class N6 adenine-specific DNA methyltransferase CH60_RS01615 PF00834 Ribulose-phosphate 3 epimerase family CH60_RS01620 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS01625 PF00579 tRNA synthetases class I (W and Y) CH60_RS01630 PF14824 Sirohaem biosynthesis protein central CH60_RS01630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH60_RS01630 PF10414 Sirohaem synthase dimerisation region CH60_RS01635 PF01226 Formate/nitrite transporter CH60_RS01640 PF13806 Rieske-like [2Fe-2S] domain CH60_RS01645 PF04324 BFD-like [2Fe-2S] binding domain CH60_RS01645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH60_RS01645 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS01645 PF18267 Rubredoxin NAD+ reductase C-terminal domain CH60_RS01645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH60_RS01650 PF07969 Amidohydrolase family CH60_RS01655 PF07690 Major Facilitator Superfamily CH60_RS01665 PF00356 Bacterial regulatory proteins, lacI family CH60_RS01670 PF11975 Family 4 glycosyl hydrolase C-terminal domain CH60_RS01670 PF02056 Family 4 glycosyl hydrolase CH60_RS01675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH60_RS01680 PF05872 Bacterial protein of unknown function (DUF853) CH60_RS01685 PF00117 Glutamine amidotransferase class-I CH60_RS01690 PF00202 Aminotransferase class-III CH60_RS01695 PF12805 FUSC-like inner membrane protein yccS CH60_RS01700 PF13545 Crp-like helix-turn-helix domain CH60_RS01700 PF00027 Cyclic nucleotide-binding domain CH60_RS01705 PF02566 OsmC-like protein CH60_RS01715 PF00485 Phosphoribulokinase / Uridine kinase family CH60_RS01720 PF06794 Uncharacterised protein family (UPF0270) CH60_RS01725 PF00561 alpha/beta hydrolase fold CH60_RS01730 PF01810 LysE type translocator CH60_RS01735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH60_RS01740 PF00005 ABC transporter CH60_RS01745 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS01750 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CH60_RS01760 PF00535 Glycosyl transferase family 2 CH60_RS01765 PF00005 ABC transporter CH60_RS01765 PF12848 ABC transporter CH60_RS01770 PF02525 Flavodoxin-like fold CH60_RS01775 PF00999 Sodium/hydrogen exchanger family CH60_RS01775 PF02254 TrkA-N domain CH60_RS01780 PF09526 Probable metal-binding protein (DUF2387) CH60_RS01785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH60_RS01790 PF04102 SlyX CH60_RS01795 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH60_RS01795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH60_RS01800 PF08348 YheO-like PAS domain CH60_RS01800 PF13309 HTH domain CH60_RS01805 PF02635 DsrE/DsrF-like family CH60_RS01810 PF02635 DsrE/DsrF-like family CH60_RS01815 PF04077 DsrH like protein CH60_RS01820 PF00164 Ribosomal protein S12/S23 CH60_RS01825 PF00177 Ribosomal protein S7p/S5e CH60_RS01830 PF00009 Elongation factor Tu GTP binding domain CH60_RS01830 PF14492 Elongation Factor G, domain II CH60_RS01830 PF03764 Elongation factor G, domain IV CH60_RS01830 PF03144 Elongation factor Tu domain 2 CH60_RS01830 PF00679 Elongation factor G C-terminus CH60_RS01835 PF03143 Elongation factor Tu C-terminal domain CH60_RS01835 PF00009 Elongation factor Tu GTP binding domain CH60_RS01835 PF03144 Elongation factor Tu domain 2 CH60_RS01840 PF01797 Transposase IS200 like CH60_RS01845 PF04324 BFD-like [2Fe-2S] binding domain CH60_RS01850 PF00210 Ferritin-like domain CH60_RS01855 PF00338 Ribosomal protein S10p/S20e CH60_RS01860 PF00297 Ribosomal protein L3 CH60_RS01865 PF00573 Ribosomal protein L4/L1 family CH60_RS01870 PF00276 Ribosomal protein L23 CH60_RS01875 PF00181 Ribosomal Proteins L2, RNA binding domain CH60_RS01875 PF03947 Ribosomal Proteins L2, C-terminal domain CH60_RS01880 PF00203 Ribosomal protein S19 CH60_RS01885 PF00237 Ribosomal protein L22p/L17e CH60_RS01890 PF07650 KH domain CH60_RS01890 PF00189 Ribosomal protein S3, C-terminal domain CH60_RS01895 PF00252 Ribosomal protein L16p/L10e CH60_RS01900 PF00831 Ribosomal L29 protein CH60_RS01905 PF00366 Ribosomal protein S17 CH60_RS01910 PF00238 Ribosomal protein L14p/L23e CH60_RS01915 PF00467 KOW motif CH60_RS01915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CH60_RS01920 PF00281 Ribosomal protein L5 CH60_RS01920 PF00673 ribosomal L5P family C-terminus CH60_RS01925 PF00253 Ribosomal protein S14p/S29e CH60_RS01930 PF00410 Ribosomal protein S8 CH60_RS01935 PF00347 Ribosomal protein L6 CH60_RS01940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CH60_RS01945 PF00333 Ribosomal protein S5, N-terminal domain CH60_RS01945 PF03719 Ribosomal protein S5, C-terminal domain CH60_RS01950 PF00327 Ribosomal protein L30p/L7e CH60_RS01955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CH60_RS01960 PF00344 SecY translocase CH60_RS01965 PF00444 Ribosomal protein L36 CH60_RS01970 PF00416 Ribosomal protein S13/S18 CH60_RS01975 PF00411 Ribosomal protein S11 CH60_RS01980 PF00163 Ribosomal protein S4/S9 N-terminal domain CH60_RS01980 PF01479 S4 domain CH60_RS01985 PF01000 RNA polymerase Rpb3/RpoA insert domain CH60_RS01985 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CH60_RS01985 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CH60_RS01990 PF01196 Ribosomal protein L17 CH60_RS01995 PF13411 MerR HTH family regulatory protein CH60_RS02000 PF03889 Alternative ribosome-rescue factor A CH60_RS02005 PF01741 Large-conductance mechanosensitive channel, MscL CH60_RS02010 PF02080 TrkA-C domain CH60_RS02010 PF02254 TrkA-N domain CH60_RS02015 PF01029 NusB family CH60_RS02015 PF01189 16S rRNA methyltransferase RsmB/F CH60_RS02020 PF02911 Formyl transferase, C-terminal domain CH60_RS02020 PF00551 Formyl transferase CH60_RS02025 PF01327 Polypeptide deformylase CH60_RS02030 PF17782 DprA winged helix domain CH60_RS02030 PF02481 DNA recombination-mediator protein A CH60_RS02035 PF04361 Protein of unknown function (DUF494) CH60_RS02040 PF01396 Topoisomerase DNA binding C4 zinc finger CH60_RS02045 PF01300 Telomere recombination CH60_RS02050 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CH60_RS02050 PF08501 Shikimate dehydrogenase substrate binding domain CH60_RS02050 PF01488 Shikimate / quinate 5-dehydrogenase CH60_RS02055 PF00132 Bacterial transferase hexapeptide (six repeats) CH60_RS02100 PF01695 IstB-like ATP binding protein CH60_RS02120 PF01281 Ribosomal protein L9, N-terminal domain CH60_RS02120 PF03948 Ribosomal protein L9, C-terminal domain CH60_RS02125 PF01084 Ribosomal protein S18 CH60_RS02130 PF00436 Single-strand binding protein family CH60_RS02135 PF01250 Ribosomal protein S6 CH60_RS02145 PF00326 Prolyl oligopeptidase family CH60_RS02150 PF07338 Protein of unknown function (DUF1471) CH60_RS02155 PF18158 Adaptive response protein AidB N-terminal domain CH60_RS02155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH60_RS02155 PF02770 Acyl-CoA dehydrogenase, middle domain CH60_RS02160 PF00588 SpoU rRNA Methylase family CH60_RS02160 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH60_RS02165 PF00773 RNB domain CH60_RS02165 PF00575 S1 RNA binding domain CH60_RS02165 PF08206 Ribonuclease B OB domain CH60_RS02165 PF08461 Ribonuclease R winged-helix domain CH60_RS02165 PF17876 Cold shock domain CH60_RS02170 PF02082 Transcriptional regulator CH60_RS02175 PF00709 Adenylosuccinate synthetase CH60_RS02180 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CH60_RS02185 PF01145 SPFH domain / Band 7 family CH60_RS02190 PF01145 SPFH domain / Band 7 family CH60_RS02190 PF12221 Bacterial membrane protein N terminal CH60_RS02195 PF13167 GTP-binding GTPase N-terminal CH60_RS02195 PF16360 GTP-binding GTPase Middle Region CH60_RS02195 PF01926 50S ribosome-binding GTPase CH60_RS02200 PF17209 Hfq protein CH60_RS02210 PF08676 MutL C terminal dimerisation domain CH60_RS02210 PF01119 DNA mismatch repair protein, C-terminal domain CH60_RS02215 PF01520 N-acetylmuramoyl-L-alanine amidase CH60_RS02220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CH60_RS02225 PF03853 YjeF-related protein N-terminus CH60_RS02225 PF01256 Carbohydrate kinase CH60_RS02230 PF08331 Domain of unknown function (DUF1730) CH60_RS02250 PF00929 Exonuclease CH60_RS02260 PF03193 RsgA GTPase CH60_RS02265 PF02666 Phosphatidylserine decarboxylase CH60_RS02270 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH60_RS02270 PF12795 Mechanosensitive ion channel porin domain CH60_RS02270 PF00924 Mechanosensitive ion channel CH60_RS02275 PF00152 tRNA synthetases class II (D, K and N) CH60_RS02285 PF02910 Fumarate reductase flavoprotein C-term CH60_RS02285 PF00890 FAD binding domain CH60_RS02290 PF13183 4Fe-4S dicluster domain CH60_RS02290 PF13085 2Fe-2S iron-sulfur cluster binding domain CH60_RS02295 PF02300 Fumarate reductase subunit C CH60_RS02300 PF02313 Fumarate reductase subunit D CH60_RS02305 PF00893 Small Multidrug Resistance protein CH60_RS02310 PF01132 Elongation factor P (EF-P) OB domain CH60_RS02310 PF08207 Elongation factor P (EF-P) KOW-like domain CH60_RS02310 PF09285 Elongation factor P, C-terminal CH60_RS02315 PF04055 Radical SAM superfamily CH60_RS02320 PF13698 Domain of unknown function (DUF4156) CH60_RS02325 PF00118 TCP-1/cpn60 chaperonin family CH60_RS02330 PF00166 Chaperonin 10 Kd subunit CH60_RS02335 PF04186 FxsA cytoplasmic membrane protein CH60_RS02340 PF00206 Lyase CH60_RS02340 PF10415 Fumarase C C-terminus CH60_RS02345 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH60_RS02350 PF03091 CutA1 divalent ion tolerance protein CH60_RS02355 PF02683 Cytochrome C biogenesis protein transmembrane region CH60_RS02355 PF11412 Disulphide bond corrector protein DsbC CH60_RS02360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH60_RS02360 PF01568 Molydopterin dinucleotide binding domain CH60_RS02360 PF00384 Molybdopterin oxidoreductase CH60_RS02365 PF12800 4Fe-4S binding domain CH60_RS02365 PF13247 4Fe-4S dicluster domain CH60_RS02370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH60_RS02370 PF13247 4Fe-4S dicluster domain CH60_RS02370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS02405 PF06379 L-rhamnose-proton symport protein (RhaT) CH60_RS02410 PF12833 Helix-turn-helix domain CH60_RS02410 PF02311 AraC-like ligand binding domain CH60_RS02415 PF12833 Helix-turn-helix domain CH60_RS02415 PF02311 AraC-like ligand binding domain CH60_RS02430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS02430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS02435 PF06134 L-rhamnose isomerase (RhaA) CH60_RS02440 PF00596 Class II Aldolase and Adducin N-terminal domain CH60_RS02445 PF00465 Iron-containing alcohol dehydrogenase CH60_RS02450 PF05336 L-rhamnose mutarotase CH60_RS02455 PF00436 Single-strand binding protein family CH60_RS02460 PF17760 UvrA interaction domain CH60_RS02460 PF17755 UvrA DNA-binding domain CH60_RS02460 PF00005 ABC transporter CH60_RS02465 PF04237 YjbR CH60_RS02470 PF00155 Aminotransferase class I and II CH60_RS02475 PF00842 Alanine racemase, C-terminal domain CH60_RS02475 PF01168 Alanine racemase, N-terminal domain CH60_RS02480 PF00772 DnaB-like helicase N terminal domain CH60_RS02480 PF03796 DnaB-like helicase C terminal domain CH60_RS02485 PF00107 Zinc-binding dehydrogenase CH60_RS02485 PF08240 Alcohol dehydrogenase GroES-like domain CH60_RS02490 PF09583 Phage shock protein G (Phageshock_PspG) CH60_RS02495 PF01207 Dihydrouridine synthase (Dus) CH60_RS02500 PF01475 Ferric uptake regulator family CH60_RS02505 PF01726 LexA DNA binding domain CH60_RS02505 PF00717 Peptidase S24-like CH60_RS02510 PF01219 Prokaryotic diacylglycerol kinase CH60_RS02515 PF01553 Acyltransferase CH60_RS02520 PF01040 UbiA prenyltransferase family CH60_RS02525 PF04345 Chorismate lyase CH60_RS02530 PF12951 Passenger-associated-transport-repeat CH60_RS02535 PF01565 FAD binding domain CH60_RS02535 PF08031 Berberine and berberine like CH60_RS02555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS02560 PF13953 PapC C-terminal domain CH60_RS02560 PF00577 Outer membrane usher protein CH60_RS02560 PF13954 PapC N-terminal domain CH60_RS02570 PF02342 TerD domain CH60_RS02575 PF02342 TerD domain CH60_RS02580 PF03741 Integral membrane protein TerC family CH60_RS02585 PF05099 Tellurite resistance protein TerB CH60_RS02590 PF02342 TerD domain CH60_RS02595 PF02342 TerD domain CH60_RS02615 PF11202 Phosphoribosyl transferase (PRTase) CH60_RS02615 PF15608 PELOTA RNA binding domain CH60_RS02635 PF04055 Radical SAM superfamily CH60_RS02640 PF06228 Haem utilisation ChuX/HutX CH60_RS02645 PF13460 NAD(P)H-binding CH60_RS02650 PF10636 Hemin uptake protein hemP CH60_RS02655 PF07715 TonB-dependent Receptor Plug Domain CH60_RS02655 PF00593 TonB dependent receptor CH60_RS02660 PF05171 Haemin-degrading HemS.ChuX domain CH60_RS02665 PF01497 Periplasmic binding protein CH60_RS02670 PF01032 FecCD transport family CH60_RS02675 PF00005 ABC transporter CH60_RS02680 PF01053 Cys/Met metabolism PLP-dependent enzyme CH60_RS02685 PF03222 Tryptophan/tyrosine permease family CH60_RS02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS02690 PF03466 LysR substrate binding domain CH60_RS02695 PF01206 Sulfurtransferase TusA CH60_RS02700 PF04143 Sulphur transport CH60_RS02705 PF01312 FlhB HrpN YscU SpaS Family CH60_RS02710 PF01311 Bacterial export proteins, family 1 CH60_RS02715 PF01313 Bacterial export proteins, family 3 CH60_RS02720 PF00813 FliP family CH60_RS02725 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH60_RS02740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH60_RS02740 PF18269 T3SS EscN ATPase C-terminal domain CH60_RS02745 PF00771 FHIPEP family CH60_RS02760 PF01514 Secretory protein of YscJ/FliF family CH60_RS02780 PF12833 Helix-turn-helix domain CH60_RS02780 PF14525 AraC-binding-like domain CH60_RS02795 PF03958 Bacterial type II/III secretion system short domain CH60_RS02795 PF00263 Bacterial type II and III secretion system protein CH60_RS02800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH60_RS02800 PF00072 Response regulator receiver domain CH60_RS02800 PF01627 Hpt domain CH60_RS02800 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS02800 PF00672 HAMP domain CH60_RS02805 PF00196 Bacterial regulatory proteins, luxR family CH60_RS02805 PF00072 Response regulator receiver domain CH60_RS02810 PF00375 Sodium:dicarboxylate symporter family CH60_RS02815 PF00501 AMP-binding enzyme CH60_RS02815 PF16177 Acetyl-coenzyme A synthetase N-terminus CH60_RS02815 PF13193 AMP-binding enzyme C-terminal domain CH60_RS02820 PF04341 Protein of unknown function, DUF485 CH60_RS02825 PF00474 Sodium:solute symporter family CH60_RS02835 PF02796 Helix-turn-helix domain of resolvase CH60_RS02835 PF00665 Integrase core domain CH60_RS02845 PF01695 IstB-like ATP binding protein CH60_RS02850 PF01817 Chorismate mutase type II CH60_RS02850 PF00800 Prephenate dehydratase CH60_RS02855 PF01817 Chorismate mutase type II CH60_RS02855 PF02153 Prephenate dehydrogenase CH60_RS02860 PF00793 DAHP synthetase I family CH60_RS02865 PF00072 Response regulator receiver domain CH60_RS02865 PF04397 LytTr DNA-binding domain CH60_RS02875 PF04338 Protein of unknown function, DUF481 CH60_RS02880 PF01245 Ribosomal protein L19 CH60_RS02885 PF01746 tRNA (Guanine-1)-methyltransferase CH60_RS02890 PF01782 RimM N-terminal domain CH60_RS02890 PF05239 PRC-barrel domain CH60_RS02895 PF00886 Ribosomal protein S16 CH60_RS02900 PF00448 SRP54-type protein, GTPase domain CH60_RS02900 PF02881 SRP54-type protein, helical bundle domain CH60_RS02900 PF02978 Signal peptide binding domain CH60_RS02905 PF01578 Cytochrome C assembly protein CH60_RS02910 PF03471 Transporter associated domain CH60_RS02910 PF01595 Cyclin M transmembrane N-terminal domain CH60_RS02910 PF00571 CBS domain CH60_RS02915 PF02664 S-Ribosylhomocysteinase (LuxS) CH60_RS02920 PF04262 Glutamate-cysteine ligase CH60_RS02925 PF09335 SNARE associated Golgi protein CH60_RS02930 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS02955 PF02599 Global regulator protein family CH60_RS02960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH60_RS02960 PF01411 tRNA synthetases class II (A) CH60_RS02960 PF02272 DHHA1 domain CH60_RS02965 PF02631 RecX family CH60_RS02970 PF00154 recA bacterial DNA recombination protein CH60_RS02975 PF02464 Competence-damaged protein CH60_RS02980 PF07690 Major Facilitator Superfamily CH60_RS02995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS02995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS03000 PF02780 Transketolase, C-terminal domain CH60_RS03000 PF02779 Transketolase, pyrimidine binding domain CH60_RS03005 PF00456 Transketolase, thiamine diphosphate binding domain CH60_RS03010 PF02653 Branched-chain amino acid transport system / permease component CH60_RS03015 PF00005 ABC transporter CH60_RS03025 PF13407 Periplasmic binding protein domain CH60_RS03030 PF00141 Peroxidase CH60_RS03035 PF07361 Cytochrome b562 CH60_RS03040 PF01292 Prokaryotic cytochrome b561 CH60_RS03045 PF02613 Nitrate reductase delta subunit CH60_RS03050 PF04976 DMSO reductase anchor subunit (DmsC) CH60_RS03055 PF12800 4Fe-4S binding domain CH60_RS03055 PF13247 4Fe-4S dicluster domain CH60_RS03060 PF00384 Molybdopterin oxidoreductase CH60_RS03060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH60_RS03060 PF01568 Molydopterin dinucleotide binding domain CH60_RS03065 PF00596 Class II Aldolase and Adducin N-terminal domain CH60_RS03070 PF00455 DeoR C terminal sensor domain CH60_RS03070 PF08220 DeoR-like helix-turn-helix domain CH60_RS03080 PF00005 ABC transporter CH60_RS03085 PF02653 Branched-chain amino acid transport system / permease component CH60_RS03090 PF02653 Branched-chain amino acid transport system / permease component CH60_RS03095 PF01261 Xylose isomerase-like TIM barrel CH60_RS03100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS03100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS03105 PF05683 Fumarase C-terminus CH60_RS03105 PF05681 Fumarate hydratase (Fumerase) CH60_RS03115 PF00557 Metallopeptidase family M24 CH60_RS03130 PF00593 TonB dependent receptor CH60_RS03130 PF07715 TonB-dependent Receptor Plug Domain CH60_RS03145 PF03150 Di-haem cytochrome c peroxidase CH60_RS03145 PF00034 Cytochrome c CH60_RS03145 PF14376 Haem-binding domain CH60_RS03150 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS03165 PF01022 Bacterial regulatory protein, arsR family CH60_RS03170 PF02040 Arsenical pump membrane protein CH60_RS03175 PF13936 Helix-turn-helix domain CH60_RS03175 PF04198 Putative sugar-binding domain CH60_RS03180 PF02734 DAK2 domain CH60_RS03185 PF02733 Dak1 domain CH60_RS03195 PF00107 Zinc-binding dehydrogenase CH60_RS03195 PF08240 Alcohol dehydrogenase GroES-like domain CH60_RS03200 PF02502 Ribose/Galactose Isomerase CH60_RS03210 PF05192 MutS domain III CH60_RS03210 PF05188 MutS domain II CH60_RS03210 PF05190 MutS family domain IV CH60_RS03210 PF00488 MutS domain V CH60_RS03210 PF01624 MutS domain I CH60_RS03215 PF04542 Sigma-70 region 2 CH60_RS03215 PF04539 Sigma-70 region 3 CH60_RS03215 PF00140 Sigma-70 factor, region 1.2 CH60_RS03215 PF04545 Sigma-70, region 4 CH60_RS03220 PF01551 Peptidase family M23 CH60_RS03220 PF01476 LysM domain CH60_RS03230 PF01975 Survival protein SurE CH60_RS03235 PF01142 tRNA pseudouridine synthase D (TruD) CH60_RS03240 PF02542 YgbB family CH60_RS03245 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CH60_RS03250 PF04977 Septum formation initiator CH60_RS03255 PF12084 Protein of unknown function (DUF3561) CH60_RS03265 PF00009 Elongation factor Tu GTP binding domain CH60_RS03270 PF01507 Phosphoadenosine phosphosulfate reductase family CH60_RS03275 PF14824 Sirohaem biosynthesis protein central CH60_RS03275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH60_RS03275 PF10414 Sirohaem synthase dimerisation region CH60_RS03300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH60_RS03300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH60_RS03305 PF00175 Oxidoreductase NAD-binding domain CH60_RS03305 PF00258 Flavodoxin CH60_RS03305 PF00667 FAD binding domain CH60_RS03310 PF01242 6-pyruvoyl tetrahydropterin synthase CH60_RS03315 PF04055 Radical SAM superfamily CH60_RS03320 PF00080 Copper/zinc superoxide dismutase (SODC) CH60_RS03325 PF00113 Enolase, C-terminal TIM barrel domain CH60_RS03325 PF03952 Enolase, N-terminal domain CH60_RS03330 PF06418 CTP synthase N-terminus CH60_RS03330 PF00117 Glutamine amidotransferase class-I CH60_RS03335 PF03819 MazG nucleotide pyrophosphohydrolase domain CH60_RS03345 PF13291 ACT domain CH60_RS03345 PF02824 TGS domain CH60_RS03345 PF04607 Region found in RelA / SpoT proteins CH60_RS03350 PF00672 HAMP domain CH60_RS03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS03350 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS03350 PF01627 Hpt domain CH60_RS03350 PF00072 Response regulator receiver domain CH60_RS03350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH60_RS03355 PF00595 PDZ domain CH60_RS03360 PF13286 Phosphohydrolase-associated domain CH60_RS03360 PF01966 HD domain CH60_RS03365 PF01048 Phosphorylase superfamily CH60_RS03370 PF01497 Periplasmic binding protein CH60_RS03375 PF03458 UPF0126 domain CH60_RS03380 PF01521 Iron-sulphur cluster biosynthesis CH60_RS03385 PF00654 Voltage gated chloride channel CH60_RS03390 PF00202 Aminotransferase class-III CH60_RS03395 PF01032 FecCD transport family CH60_RS03400 PF01497 Periplasmic binding protein CH60_RS03410 PF00005 ABC transporter CH60_RS03415 PF14814 Bifunctional transglycosylase second domain CH60_RS03415 PF00905 Penicillin binding protein transpeptidase domain CH60_RS03415 PF00912 Transglycosylase CH60_RS03415 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CH60_RS03420 PF00270 DEAD/DEAH box helicase CH60_RS03420 PF00271 Helicase conserved C-terminal domain CH60_RS03420 PF04408 Helicase associated domain (HA2) CH60_RS03420 PF08482 ATP-dependent helicase C-terminal CH60_RS03425 PF02834 LigT like Phosphoesterase CH60_RS03430 PF03749 Sugar fermentation stimulation protein RE domain CH60_RS03430 PF17746 SfsA N-terminal OB domain CH60_RS03435 PF01258 Prokaryotic dksA/traR C4-type zinc finger CH60_RS03440 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH60_RS03445 PF12626 Polymerase A arginine-rich C-terminus CH60_RS03445 PF12627 Probable RNA and SrmB- binding site of polymerase A CH60_RS03445 PF01743 Poly A polymerase head domain CH60_RS03450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CH60_RS03455 PF02548 Ketopantoate hydroxymethyltransferase CH60_RS03460 PF02569 Pantoate-beta-alanine ligase CH60_RS03465 PF02261 Aspartate decarboxylase CH60_RS03475 PF01061 ABC-2 type transporter CH60_RS03480 PF00005 ABC transporter CH60_RS03485 PF00484 Carbonic anhydrase CH60_RS03490 PF00156 Phosphoribosyl transferase domain CH60_RS03495 PF07731 Multicopper oxidase CH60_RS03495 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH60_RS03495 PF07732 Multicopper oxidase CH60_RS03495 PF00394 Multicopper oxidase CH60_RS03500 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CH60_RS03505 PF17284 Spermidine synthase tetramerisation domain CH60_RS03510 PF02675 S-adenosylmethionine decarboxylase CH60_RS03515 PF00892 EamA-like transporter family CH60_RS03520 PF06062 Uncharacterised protein family (UPF0231) CH60_RS03525 PF06434 Aconitate hydratase 2 N-terminus CH60_RS03525 PF00330 Aconitase family (aconitate hydratase) CH60_RS03525 PF11791 Aconitate B N-terminal domain CH60_RS03530 PF01797 Transposase IS200 like CH60_RS03540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH60_RS03540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS03545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH60_RS03545 PF00364 Biotin-requiring enzyme CH60_RS03545 PF02817 e3 binding domain CH60_RS03550 PF00456 Transketolase, thiamine diphosphate binding domain CH60_RS03550 PF17831 Pyruvate dehydrogenase E1 component middle domain CH60_RS03555 PF00392 Bacterial regulatory proteins, gntR family CH60_RS03555 PF07729 FCD domain CH60_RS03560 PF00324 Amino acid permease CH60_RS03565 PF17113 Regulatory signalling modulator protein AmpE CH60_RS03570 PF01510 N-acetylmuramoyl-L-alanine amidase CH60_RS03575 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CH60_RS03575 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CH60_RS03580 PF07963 Prokaryotic N-terminal methylation motif CH60_RS03585 PF00437 Type II/IV secretion system protein CH60_RS03585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CH60_RS03590 PF00482 Type II secretion system (T2SS), protein F CH60_RS03595 PF00478 IMP dehydrogenase / GMP reductase domain CH60_RS03605 PF01121 Dephospho-CoA kinase CH60_RS03610 PF07072 Cell division protein CH60_RS03615 PF03884 DNA gyrase inhibitor YacG CH60_RS03620 PF01797 Transposase IS200 like CH60_RS03630 PF01695 IstB-like ATP binding protein CH60_RS03635 PF01797 Transposase IS200 like CH60_RS03645 PF08525 Opacity-associated protein A N-terminal motif CH60_RS03645 PF04225 Opacity-associated protein A LysM-like domain CH60_RS03650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH60_RS03650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH60_RS03655 PF04405 Domain of Unknown function (DUF542) CH60_RS03655 PF01814 Hemerythrin HHE cation binding domain CH60_RS03660 PF00149 Calcineurin-like phosphoesterase CH60_RS03660 PF02872 5'-nucleotidase, C-terminal domain CH60_RS03665 PF00459 Inositol monophosphatase family CH60_RS03670 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CH60_RS03675 PF06526 Protein of unknown function (DUF1107) CH60_RS03680 PF03471 Transporter associated domain CH60_RS03680 PF01595 Cyclin M transmembrane N-terminal domain CH60_RS03680 PF00571 CBS domain CH60_RS03685 PF01625 Peptide methionine sulfoxide reductase CH60_RS03690 PF17243 POTRA domain TamA domain 1 CH60_RS03690 PF01103 Surface antigen CH60_RS03690 PF07244 Surface antigen variable number repeat CH60_RS03695 PF04357 TamB, inner membrane protein subunit of TAM complex CH60_RS03700 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CH60_RS03705 PF00719 Inorganic pyrophosphatase CH60_RS03710 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CH60_RS03715 PF08245 Mur ligase middle domain CH60_RS03715 PF02875 Mur ligase family, glutamate ligase domain CH60_RS03715 PF01225 Mur ligase family, catalytic domain CH60_RS03730 PF02863 Arginine repressor, C-terminal domain CH60_RS03730 PF01316 Arginine repressor, DNA binding domain CH60_RS03735 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CH60_RS03735 PF00056 lactate/malate dehydrogenase, NAD binding domain CH60_RS03740 PF13693 Winged helix-turn-helix DNA-binding CH60_RS03750 PF00348 Polyprenyl synthetase CH60_RS03755 PF00829 Ribosomal prokaryotic L21 protein CH60_RS03760 PF01016 Ribosomal L27 protein CH60_RS03765 PF00892 EamA-like transporter family CH60_RS03770 PF01926 50S ribosome-binding GTPase CH60_RS03770 PF01018 GTP1/OBG CH60_RS03775 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS03775 PF00672 HAMP domain CH60_RS03780 PF00072 Response regulator receiver domain CH60_RS03780 PF00486 Transcriptional regulatory protein, C terminal CH60_RS03785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CH60_RS03790 PF01272 Transcription elongation factor, GreA/GreB, C-term CH60_RS03790 PF03449 Transcription elongation factor, N-terminal CH60_RS03795 PF01985 CRS1 / YhbY (CRM) domain CH60_RS03800 PF01728 FtsJ-like methyltransferase CH60_RS03805 PF06480 FtsH Extracellular CH60_RS03805 PF17862 AAA+ lid domain CH60_RS03805 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS03805 PF01434 Peptidase family M41 CH60_RS03810 PF00809 Pterin binding enzyme CH60_RS03815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH60_RS03815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH60_RS03815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH60_RS03815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH60_RS03820 PF03840 Preprotein translocase SecG subunit CH60_RS03835 PF17384 RimP C-terminal SH3 domain CH60_RS03835 PF02576 RimP N-terminal domain CH60_RS03840 PF13184 NusA-like KH domain CH60_RS03840 PF00575 S1 RNA binding domain CH60_RS03840 PF08529 NusA N-terminal domain CH60_RS03845 PF08364 Bacterial translation initiation factor IF-2 associated region CH60_RS03845 PF11987 Translation-initiation factor 2 CH60_RS03845 PF04760 Translation initiation factor IF-2, N-terminal region CH60_RS03845 PF03144 Elongation factor Tu domain 2 CH60_RS03845 PF00009 Elongation factor Tu GTP binding domain CH60_RS03850 PF02033 Ribosome-binding factor A CH60_RS03855 PF09157 Pseudouridine synthase II TruB, C-terminal CH60_RS03855 PF16198 tRNA pseudouridylate synthase B C-terminal domain CH60_RS03855 PF01509 TruB family pseudouridylate synthase (N terminal domain) CH60_RS03860 PF00312 Ribosomal protein S15 CH60_RS03870 PF13276 HTH-like domain CH60_RS03870 PF00665 Integrase core domain CH60_RS03870 PF13333 Integrase core domain CH60_RS03875 PF00575 S1 RNA binding domain CH60_RS03875 PF01138 3' exoribonuclease family, domain 1 CH60_RS03875 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CH60_RS03875 PF03725 3' exoribonuclease family, domain 2 CH60_RS03875 PF00013 KH domain CH60_RS03880 PF07719 Tetratricopeptide repeat CH60_RS03880 PF13181 Tetratricopeptide repeat CH60_RS03885 PF12343 Cold shock protein DEAD box A CH60_RS03885 PF00271 Helicase conserved C-terminal domain CH60_RS03885 PF00270 DEAD/DEAH box helicase CH60_RS03885 PF03880 DbpA RNA binding domain CH60_RS03900 PF01381 Helix-turn-helix CH60_RS03905 PF00296 Luciferase-like monooxygenase CH60_RS03910 PF00529 HlyD membrane-fusion protein of T1SS CH60_RS03910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS03915 PF00873 AcrB/AcrD/AcrF family CH60_RS03920 PF02321 Outer membrane efflux protein CH60_RS03920 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH60_RS03925 PF01136 Peptidase family U32 CH60_RS03930 PF01136 Peptidase family U32 CH60_RS03940 PF02036 SCP-2 sterol transfer family CH60_RS03945 PF13508 Acetyltransferase (GNAT) domain CH60_RS03950 PF01541 GIY-YIG catalytic domain CH60_RS03965 PF13416 Bacterial extracellular solute-binding protein CH60_RS03970 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS03995 PF13460 NAD(P)H-binding CH60_RS04000 PF12706 Beta-lactamase superfamily domain CH60_RS04010 PF07969 Amidohydrolase family CH60_RS04015 PF00005 ABC transporter CH60_RS04020 PF00005 ABC transporter CH60_RS04025 PF06007 Phosphonate metabolism protein PhnJ CH60_RS04030 PF05861 Bacterial phosphonate metabolism protein (PhnI) CH60_RS04035 PF05845 Bacterial phosphonate metabolism protein (PhnH) CH60_RS04040 PF06754 Phosphonate metabolism protein PhnG CH60_RS04045 PF07702 UTRA domain CH60_RS04045 PF00392 Bacterial regulatory proteins, gntR family CH60_RS04055 PF03477 ATP cone domain CH60_RS04055 PF13597 Anaerobic ribonucleoside-triphosphate reductase CH60_RS04060 PF00005 ABC transporter CH60_RS04060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS04065 PF00005 ABC transporter CH60_RS04065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS04070 PF12911 N-terminal TM domain of oligopeptide transport permease C CH60_RS04070 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS04085 PF04074 YhcH/YjgK/YiaL CH60_RS04090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH60_RS04090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH60_RS04095 PF06877 Regulator of ribonuclease activity B CH60_RS04100 PF00583 Acetyltransferase (GNAT) family CH60_RS04105 PF10458 Valyl tRNA synthetase tRNA binding arm CH60_RS04105 PF08264 Anticodon-binding domain of tRNA CH60_RS04105 PF00133 tRNA synthetases class I (I, L, M and V) CH60_RS04110 PF04364 DNA polymerase III chi subunit, HolC CH60_RS04115 PF00883 Cytosol aminopeptidase family, catalytic domain CH60_RS04115 PF02789 Cytosol aminopeptidase family, N-terminal domain CH60_RS04120 PF03739 Lipopolysaccharide export system permease LptF/LptG CH60_RS04125 PF03739 Lipopolysaccharide export system permease LptF/LptG CH60_RS04135 PF00589 Phage integrase family CH60_RS04135 PF13356 Arm DNA-binding domain CH60_RS04145 PF01119 DNA mismatch repair protein, C-terminal domain CH60_RS04145 PF08676 MutL C terminal dimerisation domain CH60_RS04150 PF01695 IstB-like ATP binding protein CH60_RS04155 PF02796 Helix-turn-helix domain of resolvase CH60_RS04155 PF00665 Integrase core domain CH60_RS04160 PF01797 Transposase IS200 like CH60_RS04165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CH60_RS04170 PF13525 Outer membrane lipoprotein CH60_RS04175 PF01479 S4 domain CH60_RS04175 PF00849 RNA pseudouridylate synthase CH60_RS04180 PF02578 Multi-copper polyphenol oxidoreductase laccase CH60_RS04185 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS04185 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS04185 PF17871 AAA lid domain CH60_RS04185 PF07724 AAA domain (Cdc48 subfamily) CH60_RS04185 PF02861 Clp amino terminal domain, pathogenicity island component CH60_RS04225 PF10043 Predicted periplasmic lipoprotein (DUF2279) CH60_RS04230 PF13091 PLD-like domain CH60_RS04235 PF13607 Succinyl-CoA ligase like flavodoxin domain CH60_RS04235 PF13380 CoA binding domain CH60_RS04235 PF00583 Acetyltransferase (GNAT) family CH60_RS04240 PF03942 DTW domain CH60_RS04245 PF00085 Thioredoxin CH60_RS04250 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH60_RS04250 PF00588 SpoU rRNA Methylase family CH60_RS04255 PF07690 Major Facilitator Superfamily CH60_RS04260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS04260 PF00529 HlyD membrane-fusion protein of T1SS CH60_RS04265 PF01047 MarR family CH60_RS04270 PF05437 Branched-chain amino acid transport protein (AzlD) CH60_RS04275 PF03591 AzlC protein CH60_RS04280 PF07690 Major Facilitator Superfamily CH60_RS04290 PF01425 Amidase CH60_RS04310 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS04315 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS04320 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS04325 PF00005 ABC transporter CH60_RS04330 PF00266 Aminotransferase class-V CH60_RS04335 PF01695 IstB-like ATP binding protein CH60_RS04350 PF00665 Integrase core domain CH60_RS04350 PF02796 Helix-turn-helix domain of resolvase CH60_RS04380 PF00005 ABC transporter CH60_RS04380 PF08402 TOBE domain CH60_RS04385 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS04400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH60_RS04400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH60_RS04405 PF00480 ROK family CH60_RS04410 PF00392 Bacterial regulatory proteins, gntR family CH60_RS04410 PF07702 UTRA domain CH60_RS04495 PF05638 Type VI secretion system effector, Hcp CH60_RS04540 PF01066 CDP-alcohol phosphatidyltransferase CH60_RS04545 PF01541 GIY-YIG catalytic domain CH60_RS04545 PF02151 UvrB/uvrC motif CH60_RS04545 PF08459 UvrC Helix-hairpin-helix N-terminal CH60_RS04550 PF00196 Bacterial regulatory proteins, luxR family CH60_RS04550 PF00072 Response regulator receiver domain CH60_RS04555 PF10769 Protein of unknown function (DUF2594) CH60_RS04560 PF06942 GlpM protein CH60_RS04570 PF13505 Outer membrane protein beta-barrel domain CH60_RS04580 PF00324 Amino acid permease CH60_RS04585 PF01344 Kelch motif CH60_RS04590 PF03358 NADPH-dependent FMN reductase CH60_RS04595 PF04261 Dyp-type peroxidase family CH60_RS04600 PF13473 Cupredoxin-like domain CH60_RS04600 PF09375 Imelysin CH60_RS04605 PF03239 Iron permease FTR1 family CH60_RS04610 PF00474 Sodium:solute symporter family CH60_RS04620 PF00171 Aldehyde dehydrogenase family CH60_RS04620 PF01619 Proline dehydrogenase CH60_RS04620 PF14850 DNA-binding domain of Proline dehydrogenase CH60_RS04620 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CH60_RS04635 PF00005 ABC transporter CH60_RS04640 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS04645 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS04650 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS04655 PF02899 Phage integrase, N-terminal SAM-like domain CH60_RS04660 PF04542 Sigma-70 region 2 CH60_RS04660 PF04539 Sigma-70 region 3 CH60_RS04660 PF04545 Sigma-70, region 4 CH60_RS04665 PF00700 Bacterial flagellin C-terminal helical region CH60_RS04665 PF08884 Flagellin D3 domain CH60_RS04665 PF00669 Bacterial flagellin N-terminal helical region CH60_RS04670 PF07196 Flagellin hook IN motif CH60_RS04670 PF02465 Flagellar hook-associated protein 2 N-terminus CH60_RS04670 PF07195 Flagellar hook-associated protein 2 C-terminus CH60_RS04675 PF02561 Flagellar protein FliS CH60_RS04680 PF05400 Flagellar protein FliT CH60_RS04690 PF12833 Helix-turn-helix domain CH60_RS04695 PF00211 Adenylate and Guanylate cyclase catalytic domain CH60_RS04695 PF02743 Cache domain CH60_RS04695 PF00672 HAMP domain CH60_RS04700 PF01966 HD domain CH60_RS04705 PF00730 HhH-GPD superfamily base excision DNA repair protein CH60_RS04720 PF02049 Flagellar hook-basal body complex protein FliE CH60_RS04725 PF08345 Flagellar M-ring protein C-terminal CH60_RS04725 PF01514 Secretory protein of YscJ/FliF family CH60_RS04730 PF01706 FliG C-terminal domain CH60_RS04730 PF14842 FliG N-terminal domain CH60_RS04730 PF14841 FliG middle domain CH60_RS04735 PF02108 Flagellar assembly protein FliH CH60_RS04740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH60_RS04740 PF18269 T3SS EscN ATPase C-terminal domain CH60_RS04745 PF02050 Flagellar FliJ protein CH60_RS04750 PF02120 Flagellar hook-length control protein FliK CH60_RS04755 PF03748 Flagellar basal body-associated protein FliL CH60_RS04760 PF02154 Flagellar motor switch protein FliM CH60_RS04760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH60_RS04765 PF16973 Flagellar motor switch protein FliN N-terminal CH60_RS04765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH60_RS04770 PF04347 Flagellar biosynthesis protein, FliO CH60_RS04775 PF00813 FliP family CH60_RS04780 PF01313 Bacterial export proteins, family 3 CH60_RS04785 PF01311 Bacterial export proteins, family 1 CH60_RS04800 PF00294 pfkB family carbohydrate kinase CH60_RS04805 PF02653 Branched-chain amino acid transport system / permease component CH60_RS04810 PF00005 ABC transporter CH60_RS04815 PF13407 Periplasmic binding protein domain CH60_RS04820 PF02653 Branched-chain amino acid transport system / permease component CH60_RS04825 PF00596 Class II Aldolase and Adducin N-terminal domain CH60_RS04830 PF04198 Putative sugar-binding domain CH60_RS04835 PF00669 Bacterial flagellin N-terminal helical region CH60_RS04840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS04840 PF00460 Flagella basal body rod protein CH60_RS04845 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CH60_RS04845 PF10135 Rod binding protein CH60_RS04850 PF02119 Flagellar P-ring protein CH60_RS04855 PF02107 Flagellar L-ring protein CH60_RS04865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS04865 PF00460 Flagella basal body rod protein CH60_RS04870 PF07559 Flagellar basal body protein FlaE CH60_RS04870 PF00460 Flagella basal body rod protein CH60_RS04870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS04875 PF13860 FlgD Ig-like domain CH60_RS04875 PF13861 FlgD Tudor-like domain CH60_RS04875 PF03963 Flagellar hook capping protein - N-terminal region CH60_RS04880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS04880 PF00460 Flagella basal body rod protein CH60_RS04885 PF00460 Flagella basal body rod protein CH60_RS04890 PF13144 Chaperone for flagella basal body P-ring formation CH60_RS04890 PF17656 FlgA N-terminal domain CH60_RS04895 PF04316 Anti-sigma-28 factor, FlgM CH60_RS04900 PF05130 FlgN protein CH60_RS04905 PF02369 Bacterial Ig-like domain (group 1) CH60_RS04905 PF11924 Inverse autotransporter, beta-domain CH60_RS04905 PF07979 Intimin C-type lectin domain CH60_RS04905 PF09134 Invasin, domain 3 CH60_RS04915 PF11924 Inverse autotransporter, beta-domain CH60_RS04915 PF09134 Invasin, domain 3 CH60_RS04915 PF07979 Intimin C-type lectin domain CH60_RS04915 PF02369 Bacterial Ig-like domain (group 1) CH60_RS04920 PF06366 Flagellar protein FlhE CH60_RS04925 PF00771 FHIPEP family CH60_RS04930 PF01312 FlhB HrpN YscU SpaS Family CH60_RS04950 PF10709 Protein of unknown function (DUF2511) CH60_RS04960 PF04234 CopC domain CH60_RS04965 PF00210 Ferritin-like domain CH60_RS04970 PF06440 DNA polymerase III, theta subunit CH60_RS04975 PF00561 alpha/beta hydrolase fold CH60_RS04980 PF00326 Prolyl oligopeptidase family CH60_RS04980 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CH60_RS04985 PF13995 YebF-like protein CH60_RS04990 PF04266 ASCH domain CH60_RS04995 PF07130 YebG protein CH60_RS05000 PF03880 DbpA RNA binding domain CH60_RS05000 PF00270 DEAD/DEAH box helicase CH60_RS05000 PF00271 Helicase conserved C-terminal domain CH60_RS05005 PF02222 ATP-grasp domain CH60_RS05010 PF03701 Uncharacterised protein family (UPF0181) CH60_RS05015 PF00425 chorismate binding enzyme CH60_RS05015 PF04715 Anthranilate synthase component I, N terminal region CH60_RS05020 PF00293 NUDIX domain CH60_RS05025 PF03315 Serine dehydratase beta chain CH60_RS05025 PF03313 Serine dehydratase alpha chain CH60_RS05030 PF01613 Flavin reductase like domain CH60_RS05035 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CH60_RS05035 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CH60_RS05045 PF03328 HpcH/HpaI aldolase/citrate lyase family CH60_RS05050 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH60_RS05055 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CH60_RS05060 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CH60_RS05065 PF00171 Aldehyde dehydrogenase family CH60_RS05070 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH60_RS05075 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH60_RS05080 PF01047 MarR family CH60_RS05085 PF03741 Integral membrane protein TerC family CH60_RS05085 PF03471 Transporter associated domain CH60_RS05090 PF03830 PTS system sorbose subfamily IIB component CH60_RS05090 PF03610 PTS system fructose IIA component CH60_RS05095 PF03609 PTS system sorbose-specific iic component CH60_RS05100 PF03613 PTS system mannose/fructose/sorbose family IID component CH60_RS05105 PF06173 Protein of unknown function (DUF986) CH60_RS05110 PF02659 Putative manganese efflux pump CH60_RS05115 PF00593 TonB dependent receptor CH60_RS05115 PF07715 TonB-dependent Receptor Plug Domain CH60_RS05120 PF02796 Helix-turn-helix domain of resolvase CH60_RS05120 PF00665 Integrase core domain CH60_RS05125 PF01695 IstB-like ATP binding protein CH60_RS05140 PF00782 Dual specificity phosphatase, catalytic domain CH60_RS05145 PF12146 Serine aminopeptidase, S33 CH60_RS05145 PF12147 Putative methyltransferase CH60_RS05150 PF01553 Acyltransferase CH60_RS05160 PF01066 CDP-alcohol phosphatidyltransferase CH60_RS05200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CH60_RS05200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CH60_RS05210 PF01797 Transposase IS200 like CH60_RS05220 PF01406 tRNA synthetases class I (C) catalytic domain CH60_RS05220 PF09190 DALR domain CH60_RS05225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH60_RS05230 PF00149 Calcineurin-like phosphoesterase CH60_RS05235 PF00731 AIR carboxylase CH60_RS05240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CH60_RS05240 PF02222 ATP-grasp domain CH60_RS05250 PF00005 ABC transporter CH60_RS05255 PF13472 GDSL-like Lipase/Acylhydrolase family CH60_RS05260 PF00106 short chain dehydrogenase CH60_RS05265 PF00085 Thioredoxin CH60_RS05270 PF01145 SPFH domain / Band 7 family CH60_RS05270 PF16200 C-terminal region of band_7 CH60_RS05275 PF01957 NfeD-like C-terminal, partner-binding CH60_RS05280 PF13411 MerR HTH family regulatory protein CH60_RS05285 PF00403 Heavy-metal-associated domain CH60_RS05290 PF01963 TraB family CH60_RS05295 PF04073 Aminoacyl-tRNA editing domain CH60_RS05310 PF00149 Calcineurin-like phosphoesterase CH60_RS05310 PF02872 5'-nucleotidase, C-terminal domain CH60_RS05315 PF02872 5'-nucleotidase, C-terminal domain CH60_RS05315 PF00149 Calcineurin-like phosphoesterase CH60_RS05320 PF00149 Calcineurin-like phosphoesterase CH60_RS05320 PF02872 5'-nucleotidase, C-terminal domain CH60_RS05325 PF07690 Major Facilitator Superfamily CH60_RS05330 PF02254 TrkA-N domain CH60_RS05330 PF00999 Sodium/hydrogen exchanger family CH60_RS05335 PF00294 pfkB family carbohydrate kinase CH60_RS05340 PF02706 Chain length determinant protein CH60_RS05345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH60_RS05345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH60_RS05345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH60_RS05345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH60_RS05350 PF00535 Glycosyl transferase family 2 CH60_RS05355 PF00483 Nucleotidyl transferase CH60_RS05355 PF01050 Mannose-6-phosphate isomerase CH60_RS05360 PF01370 NAD dependent epimerase/dehydratase family CH60_RS05370 PF00534 Glycosyl transferases group 1 CH60_RS05370 PF13439 Glycosyltransferase Family 4 CH60_RS05400 PF01370 NAD dependent epimerase/dehydratase family CH60_RS05405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH60_RS05410 PF16363 GDP-mannose 4,6 dehydratase CH60_RS05415 PF00483 Nucleotidyl transferase CH60_RS05420 PF00970 Oxidoreductase FAD-binding domain CH60_RS05420 PF00111 2Fe-2S iron-sulfur cluster binding domain CH60_RS05420 PF00175 Oxidoreductase NAD-binding domain CH60_RS05425 PF00762 Ferrochelatase CH60_RS05430 PF05191 Adenylate kinase, active site lid CH60_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS05435 PF00183 Hsp90 protein CH60_RS05440 PF13662 Toprim domain CH60_RS05440 PF02132 RecR protein CH60_RS05445 PF02575 YbaB/EbfC DNA-binding family CH60_RS05450 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CH60_RS05450 PF12169 DNA polymerase III subunits gamma and tau domain III CH60_RS05450 PF12170 DNA polymerase III tau subunit V interacting with alpha CH60_RS05455 PF00156 Phosphoribosyl transferase domain CH60_RS05470 PF10689 Protein of unknown function (DUF2496) CH60_RS05475 PF00924 Mechanosensitive ion channel CH60_RS05475 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH60_RS05475 PF12795 Mechanosensitive ion channel porin domain CH60_RS05480 PF02635 DsrE/DsrF-like family CH60_RS05485 PF00440 Bacterial regulatory proteins, tetR family CH60_RS05485 PF08361 MAATS-type transcriptional repressor, C-terminal region CH60_RS05490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS05490 PF00529 HlyD membrane-fusion protein of T1SS CH60_RS05495 PF00873 AcrB/AcrD/AcrF family CH60_RS05500 PF01197 Ribosomal protein L31 CH60_RS05505 PF00444 Ribosomal protein L36 CH60_RS05515 PF10757 Biofilm formation regulator YbaJ CH60_RS05520 PF05321 Haemolysin expression modulating protein CH60_RS05525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH60_RS05530 PF09619 Type III secretion system lipoprotein chaperone (YscW) CH60_RS05540 PF00909 Ammonium Transporter Family CH60_RS05545 PF00543 Nitrogen regulatory protein P-II CH60_RS05550 PF00005 ABC transporter CH60_RS05550 PF00664 ABC transporter transmembrane region CH60_RS05555 PF00005 ABC transporter CH60_RS05555 PF00664 ABC transporter transmembrane region CH60_RS05560 PF13404 AsnC-type helix-turn-helix domain CH60_RS05560 PF01037 Lrp/AsnC ligand binding domain CH60_RS05565 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS05575 PF12793 Sugar transport-related sRNA regulator N-term CH60_RS05575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS05580 PF06508 Queuosine biosynthesis protein QueC CH60_RS05595 PF13145 PPIC-type PPIASE domain CH60_RS05600 PF00216 Bacterial DNA-binding protein CH60_RS05605 PF05362 Lon protease (S16) C-terminal proteolytic domain CH60_RS05605 PF02190 ATP-dependent protease La (LON) substrate-binding domain CH60_RS05605 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS05610 PF07724 AAA domain (Cdc48 subfamily) CH60_RS05610 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS05610 PF06689 ClpX C4-type zinc finger CH60_RS05615 PF00574 Clp protease CH60_RS05620 PF05697 Bacterial trigger factor protein (TF) CH60_RS05620 PF05698 Bacterial trigger factor protein (TF) C-terminus CH60_RS05620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH60_RS05630 PF01722 BolA-like protein CH60_RS05635 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH60_RS05635 PF03923 Uncharacterized lipoprotein CH60_RS05640 PF07690 Major Facilitator Superfamily CH60_RS05645 PF03502 Nucleoside-specific channel-forming protein, Tsx CH60_RS05650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CH60_RS05650 PF06481 COX Aromatic Rich Motif CH60_RS05655 PF00115 Cytochrome C and Quinol oxidase polypeptide I CH60_RS05660 PF00510 Cytochrome c oxidase subunit III CH60_RS05665 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CH60_RS05670 PF01040 UbiA prenyltransferase family CH60_RS05675 PF07690 Major Facilitator Superfamily CH60_RS05680 PF04461 Protein of unknown function (DUF520) CH60_RS05685 PF02558 Ketopantoate reductase PanE/ApbA CH60_RS05685 PF08546 Ketopantoate reductase PanE/ApbA C terminal CH60_RS05690 PF01965 DJ-1/PfpI family CH60_RS05695 PF02568 Thiamine biosynthesis protein (ThiI) CH60_RS05695 PF02926 THUMP domain CH60_RS05705 PF02609 Exonuclease VII small subunit CH60_RS05710 PF00348 Polyprenyl synthetase CH60_RS05715 PF02780 Transketolase, C-terminal domain CH60_RS05715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CH60_RS05715 PF02779 Transketolase, pyrimidine binding domain CH60_RS05720 PF01797 Transposase IS200 like CH60_RS05730 PF04608 Phosphatidylglycerophosphatase A CH60_RS05735 PF02769 AIR synthase related protein, C-terminal domain CH60_RS05735 PF00586 AIR synthase related protein, N-terminal domain CH60_RS05740 PF01029 NusB family CH60_RS05745 PF00885 6,7-dimethyl-8-ribityllumazine synthase CH60_RS05750 PF01872 RibD C-terminal domain CH60_RS05750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH60_RS05755 PF03477 ATP cone domain CH60_RS05775 PF02355 Protein export membrane protein CH60_RS05775 PF07549 SecD/SecF GG Motif CH60_RS05780 PF13721 SecD export protein N-terminal TM region CH60_RS05780 PF02355 Protein export membrane protein CH60_RS05780 PF07549 SecD/SecF GG Motif CH60_RS05785 PF02699 Preprotein translocase subunit CH60_RS05790 PF01702 Queuine tRNA-ribosyltransferase CH60_RS05795 PF02547 Queuosine biosynthesis protein CH60_RS05800 PF04336 Acyl carrier protein phosphodiesterase CH60_RS05805 PF00578 AhpC/TSA family CH60_RS05805 PF10417 C-terminal domain of 1-Cys peroxiredoxin CH60_RS05830 PF02903 Alpha amylase, N-terminal ig-like domain CH60_RS05830 PF00128 Alpha amylase, catalytic domain CH60_RS05835 PF00324 Amino acid permease CH60_RS05840 PF05525 Branched-chain amino acid transport protein CH60_RS05845 PF12849 PBP superfamily domain CH60_RS05850 PF00989 PAS fold CH60_RS05850 PF11808 Phosphate regulon sensor protein PhoR CH60_RS05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS05850 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS05855 PF00486 Transcriptional regulatory protein, C terminal CH60_RS05855 PF00072 Response regulator receiver domain CH60_RS05865 PF12320 Type 5 capsule protein repressor C-terminal domain CH60_RS05865 PF00149 Calcineurin-like phosphoesterase CH60_RS05870 PF13476 AAA domain CH60_RS05875 PF00480 ROK family CH60_RS05880 PF04381 Putative exonuclease, RdgC CH60_RS05885 PF06865 Pyrimidine/purine nucleoside phosphorylase CH60_RS05895 PF01202 Shikimate kinase CH60_RS05910 PF08241 Methyltransferase domain CH60_RS05920 PF07317 Flagellar regulator YcgR CH60_RS05920 PF07238 PilZ domain CH60_RS05925 PF00171 Aldehyde dehydrogenase family CH60_RS05930 PF00696 Amino acid kinase family CH60_RS05930 PF01472 PUA domain CH60_RS05935 PF07417 Sigma factor-binding transcriptional regulator Crl CH60_RS05940 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CH60_RS05945 PF00156 Phosphoribosyl transferase domain CH60_RS05970 PF01546 Peptidase family M20/M25/M40 CH60_RS05970 PF07687 Peptidase dimerisation domain CH60_RS05975 PF00817 impB/mucB/samB family CH60_RS05975 PF11798 IMS family HHH motif CH60_RS05975 PF11799 impB/mucB/samB family C-terminal domain CH60_RS05980 PF03009 Glycerophosphoryl diester phosphodiesterase family CH60_RS05990 PF02424 ApbE family CH60_RS05995 PF00175 Oxidoreductase NAD-binding domain CH60_RS05995 PF00111 2Fe-2S iron-sulfur cluster binding domain CH60_RS05995 PF00970 Oxidoreductase FAD-binding domain CH60_RS06000 PF02508 Rnf-Nqr subunit, membrane protein CH60_RS06005 PF02508 Rnf-Nqr subunit, membrane protein CH60_RS06010 PF04205 FMN-binding domain CH60_RS06015 PF03116 NQR2, RnfD, RnfE family CH60_RS06020 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CH60_RS06020 PF11973 NQRA C-terminal domain CH60_RS06025 PF03734 L,D-transpeptidase catalytic domain CH60_RS06030 PF13230 Glutamine amidotransferases class-II CH60_RS06035 PF13580 SIS domain CH60_RS06040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CH60_RS06040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH60_RS06040 PF09317 Domain of unknown function (DUF1974) CH60_RS06050 PF18071 HMW1C N-terminal CH60_RS06050 PF18254 HMW1 domain 2 CH60_RS06055 PF05860 haemagglutination activity domain CH60_RS06060 PF08479 POTRA domain, ShlB-type CH60_RS06060 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH60_RS06065 PF07687 Peptidase dimerisation domain CH60_RS06065 PF01546 Peptidase family M20/M25/M40 CH60_RS06070 PF00266 Aminotransferase class-V CH60_RS06075 PF02796 Helix-turn-helix domain of resolvase CH60_RS06075 PF00665 Integrase core domain CH60_RS06080 PF01695 IstB-like ATP binding protein CH60_RS06085 PF13356 Arm DNA-binding domain CH60_RS06085 PF00589 Phage integrase family CH60_RS06090 PF01527 Transposase CH60_RS06095 PF13356 Arm DNA-binding domain CH60_RS06095 PF00589 Phage integrase family CH60_RS06105 PF12697 Alpha/beta hydrolase family CH60_RS06115 PF01402 Ribbon-helix-helix protein, copG family CH60_RS06120 PF00258 Flavodoxin CH60_RS06125 PF01475 Ferric uptake regulator family CH60_RS06135 PF03573 outer membrane porin, OprD family CH60_RS06140 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH60_RS06140 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CH60_RS06145 PF00367 phosphotransferase system, EIIB CH60_RS06145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH60_RS06145 PF02378 Phosphotransferase system, EIIC CH60_RS06150 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CH60_RS06155 PF01979 Amidohydrolase family CH60_RS06160 PF00480 ROK family CH60_RS06160 PF01047 MarR family CH60_RS06165 PF13344 Haloacid dehalogenase-like hydrolase CH60_RS06170 PF13537 Glutamine amidotransferase domain CH60_RS06170 PF00733 Asparagine synthase CH60_RS06210 PF01494 FAD binding domain CH60_RS06215 PF04055 Radical SAM superfamily CH60_RS06215 PF01938 TRAM domain CH60_RS06215 PF00919 Uncharacterized protein family UPF0004 CH60_RS06220 PF02562 PhoH-like protein CH60_RS06225 PF02130 Uncharacterized protein family UPF0054 CH60_RS06230 PF00571 CBS domain CH60_RS06230 PF03471 Transporter associated domain CH60_RS06235 PF00795 Carbon-nitrogen hydrolase CH60_RS06240 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS06245 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS06255 PF00005 ABC transporter CH60_RS06260 PF07295 Zinc-ribbon containing domain CH60_RS06265 PF00133 tRNA synthetases class I (I, L, M and V) CH60_RS06265 PF08264 Anticodon-binding domain of tRNA CH60_RS06265 PF13603 Leucyl-tRNA synthetase, Domain 2 CH60_RS06270 PF04390 Lipopolysaccharide-assembly CH60_RS06275 PF06144 DNA polymerase III, delta subunit CH60_RS06275 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CH60_RS06280 PF01467 Cytidylyltransferase-like CH60_RS06290 PF02590 Predicted SPOUT methyltransferase CH60_RS06295 PF00905 Penicillin binding protein transpeptidase domain CH60_RS06295 PF03717 Penicillin-binding Protein dimerisation domain CH60_RS06300 PF01098 Cell cycle protein CH60_RS06305 PF03330 Lytic transglycolase CH60_RS06305 PF05036 Sporulation related domain CH60_RS06310 PF00768 D-alanyl-D-alanine carboxypeptidase CH60_RS06310 PF07943 Penicillin-binding protein 5, C-terminal domain CH60_RS06315 PF04359 Protein of unknown function (DUF493) CH60_RS06320 PF03099 Biotin/lipoate A/B protein ligase family CH60_RS06325 PF04055 Radical SAM superfamily CH60_RS06325 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CH60_RS06330 PF02416 mttA/Hcf106 family CH60_RS06340 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH60_RS06345 PF00313 'Cold-shock' DNA-binding domain CH60_RS06350 PF00313 'Cold-shock' DNA-binding domain CH60_RS06355 PF00196 Bacterial regulatory proteins, luxR family CH60_RS06380 PF00664 ABC transporter transmembrane region CH60_RS06380 PF00005 ABC transporter CH60_RS06390 PF04962 KduI/IolB family CH60_RS06395 PF01261 Xylose isomerase-like TIM barrel CH60_RS06400 PF00294 pfkB family carbohydrate kinase CH60_RS06405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH60_RS06405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH60_RS06410 PF02653 Branched-chain amino acid transport system / permease component CH60_RS06415 PF00005 ABC transporter CH60_RS06420 PF13407 Periplasmic binding protein domain CH60_RS06430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH60_RS06430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH60_RS06430 PF00205 Thiamine pyrophosphate enzyme, central domain CH60_RS06435 PF00171 Aldehyde dehydrogenase family CH60_RS06450 PF00207 Alpha-2-macroglobulin family CH60_RS06450 PF07703 Alpha-2-macroglobulin bait region domain CH60_RS06450 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CH60_RS06450 PF01835 MG2 domain CH60_RS06450 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CH60_RS06450 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CH60_RS06450 PF17962 Bacterial macroglobulin domain 6 CH60_RS06455 PF00905 Penicillin binding protein transpeptidase domain CH60_RS06455 PF00912 Transglycosylase CH60_RS06455 PF06832 Penicillin-Binding Protein C-terminus Family CH60_RS06460 PF13693 Winged helix-turn-helix DNA-binding CH60_RS06485 PF05638 Type VI secretion system effector, Hcp CH60_RS06500 PF03212 Pertactin CH60_RS06500 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS06500 PF03797 Autotransporter beta-domain CH60_RS06500 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH60_RS06510 PF08007 Cupin superfamily protein CH60_RS06530 PF01915 Glycosyl hydrolase family 3 C-terminal domain CH60_RS06530 PF00933 Glycosyl hydrolase family 3 N terminal domain CH60_RS06530 PF14310 Fibronectin type III-like domain CH60_RS06550 PF00248 Aldo/keto reductase family CH60_RS06555 PF00248 Aldo/keto reductase family CH60_RS06560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS06560 PF03466 LysR substrate binding domain CH60_RS06565 PF00665 Integrase core domain CH60_RS06565 PF02796 Helix-turn-helix domain of resolvase CH60_RS06570 PF01695 IstB-like ATP binding protein CH60_RS06575 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS06575 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS06580 PF01797 Transposase IS200 like CH60_RS06590 PF04957 Ribosome modulation factor CH60_RS06600 PF03886 ABC-type transport auxiliary lipoprotein component CH60_RS06605 PF02470 MlaD protein CH60_RS06610 PF04403 Paraquat-inducible protein A CH60_RS06615 PF16326 ABC transporter C-terminal domain CH60_RS06615 PF00005 ABC transporter CH60_RS06615 PF12848 ABC transporter CH60_RS06620 PF10672 S-adenosylmethionine-dependent methyltransferase CH60_RS06620 PF02926 THUMP domain CH60_RS06620 PF01170 Putative RNA methylase family UPF0020 CH60_RS06625 PF00111 2Fe-2S iron-sulfur cluster binding domain CH60_RS06625 PF03476 MOSC N-terminal beta barrel domain CH60_RS06625 PF03473 MOSC domain CH60_RS06630 PF07126 Cell-division protein ZapC CH60_RS06635 PF01180 Dihydroorotate dehydrogenase CH60_RS06640 PF01433 Peptidase family M1 domain CH60_RS06640 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CH60_RS06640 PF11940 Domain of unknown function (DUF3458) Ig-like fold CH60_RS06645 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CH60_RS06645 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CH60_RS06650 PF00152 tRNA synthetases class II (D, K and N) CH60_RS06650 PF01336 OB-fold nucleic acid binding domain CH60_RS06655 PF00267 Gram-negative porin CH60_RS06660 PF00155 Aminotransferase class I and II CH60_RS06665 PF00753 Metallo-beta-lactamase superfamily CH60_RS06670 PF05951 Bacterial protein of unknown function (DUF882) CH60_RS06675 PF03734 L,D-transpeptidase catalytic domain CH60_RS06675 PF01471 Putative peptidoglycan binding domain CH60_RS06690 PF04310 MukB N-terminal CH60_RS06690 PF16330 MukB hinge domain CH60_RS06695 PF04288 MukE-like family CH60_RS06700 PF17193 MukF C-terminal domain CH60_RS06700 PF03882 MukF winged-helix domain CH60_RS06700 PF17192 MukF middle domain CH60_RS06705 PF13847 Methyltransferase domain CH60_RS06715 PF01636 Phosphotransferase enzyme family CH60_RS06720 PF02348 Cytidylyltransferase CH60_RS06725 PF03966 Trm112p-like protein CH60_RS06730 PF00313 'Cold-shock' DNA-binding domain CH60_RS06740 PF07063 Domain of unknown function (DUF1338) CH60_RS06745 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CH60_RS06750 PF00664 ABC transporter transmembrane region CH60_RS06750 PF00005 ABC transporter CH60_RS06755 PF00753 Metallo-beta-lactamase superfamily CH60_RS06755 PF03772 Competence protein CH60_RS06760 PF00216 Bacterial DNA-binding protein CH60_RS06765 PF00575 S1 RNA binding domain CH60_RS06770 PF02224 Cytidylate kinase CH60_RS06775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH60_RS06780 PF00266 Aminotransferase class-V CH60_RS06790 PF05662 Coiled stalk of trimeric autotransporter adhesin CH60_RS06790 PF05658 Head domain of trimeric autotransporter adhesin CH60_RS06790 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS06790 PF05662 Coiled stalk of trimeric autotransporter adhesin CH60_RS06790 PF05658 Head domain of trimeric autotransporter adhesin CH60_RS06790 PF03895 YadA-like membrane anchor domain CH60_RS06790 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS06790 PF03895 YadA-like membrane anchor domain CH60_RS06795 PF17763 Glutaminase/Asparaginase C-terminal domain CH60_RS06795 PF00710 Asparaginase, N-terminal CH60_RS06800 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CH60_RS06800 PF18381 YcaO cyclodehydratase C-terminal domain CH60_RS06805 PF01226 Formate/nitrite transporter CH60_RS06810 PF01228 Glycine radical CH60_RS06810 PF02901 Pyruvate formate lyase-like CH60_RS06820 PF04055 Radical SAM superfamily CH60_RS06825 PF07690 Major Facilitator Superfamily CH60_RS06830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH60_RS06830 PF02403 Seryl-tRNA synthetase N-terminal domain CH60_RS06835 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS06835 PF16193 AAA C-terminal domain CH60_RS06835 PF12002 MgsA AAA+ ATPase C terminal CH60_RS06840 PF03548 Outer membrane lipoprotein carrier protein LolA CH60_RS06845 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CH60_RS06845 PF01580 FtsK/SpoIIIE family CH60_RS06845 PF09397 Ftsk gamma domain CH60_RS06845 PF17854 FtsK alpha domain CH60_RS06850 PF01037 Lrp/AsnC ligand binding domain CH60_RS06855 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS06865 PF00664 ABC transporter transmembrane region CH60_RS06865 PF00005 ABC transporter CH60_RS06870 PF00005 ABC transporter CH60_RS06870 PF00664 ABC transporter transmembrane region CH60_RS06875 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CH60_RS06880 PF01176 Translation initiation factor 1A / IF-1 CH60_RS06890 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS06890 PF02861 Clp amino terminal domain, pathogenicity island component CH60_RS06890 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS06890 PF17871 AAA lid domain CH60_RS06890 PF07724 AAA domain (Cdc48 subfamily) CH60_RS06895 PF02617 ATP-dependent Clp protease adaptor protein ClpS CH60_RS06900 PF00313 'Cold-shock' DNA-binding domain CH60_RS06905 PF00005 ABC transporter CH60_RS06905 PF02687 FtsX-like permease family CH60_RS06905 PF12704 MacB-like periplasmic core domain CH60_RS06910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS06915 PF04393 Protein of unknown function (DUF535) CH60_RS06920 PF11398 Protein of unknown function (DUF2813) CH60_RS06925 PF03956 Lysine exporter LysO CH60_RS06930 PF03063 Prismane/CO dehydrogenase family CH60_RS06935 PF00111 2Fe-2S iron-sulfur cluster binding domain CH60_RS06935 PF00175 Oxidoreductase NAD-binding domain CH60_RS06935 PF00970 Oxidoreductase FAD-binding domain CH60_RS06940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH60_RS06940 PF00205 Thiamine pyrophosphate enzyme, central domain CH60_RS06940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH60_RS06945 PF01212 Beta-eliminating lyase CH60_RS06950 PF13460 NAD(P)H-binding CH60_RS06950 PF11066 Protein of unknown function (DUF2867) CH60_RS06955 PF01370 NAD dependent epimerase/dehydratase family CH60_RS06960 PF12883 Protein of unknown function (DUF3828) CH60_RS06965 PF01817 Chorismate mutase type II CH60_RS06970 PF00005 ABC transporter CH60_RS06975 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS06980 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS06985 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS06995 PF00892 EamA-like transporter family CH60_RS07000 PF10100 Staphylopine dehydrogenase CH60_RS07005 PF03059 Nicotianamine synthase protein CH60_RS07010 PF00005 ABC transporter CH60_RS07040 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS07045 PF05958 tRNA (Uracil-5-)-methyltransferase CH60_RS07050 PF10767 Protein of unknown function (DUF2593) CH60_RS07055 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS07060 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS07065 PF08402 TOBE domain CH60_RS07065 PF00005 ABC transporter CH60_RS07070 PF13416 Bacterial extracellular solute-binding protein CH60_RS07075 PF10722 Putative bacterial sensory transduction regulator CH60_RS07085 PF07214 Protein of unknown function (DUF1418) CH60_RS07090 PF00462 Glutaredoxin CH60_RS07095 PF02080 TrkA-C domain CH60_RS07095 PF06826 Predicted Permease Membrane Region CH60_RS07105 PF01569 PAP2 superfamily CH60_RS07110 PF01791 DeoC/LacD family aldolase CH60_RS07115 PF08220 DeoR-like helix-turn-helix domain CH60_RS07115 PF00455 DeoR C terminal sensor domain CH60_RS07130 PF07943 Penicillin-binding protein 5, C-terminal domain CH60_RS07130 PF00768 D-alanyl-D-alanine carboxypeptidase CH60_RS07135 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS07140 PF09383 NIL domain CH60_RS07140 PF00005 ABC transporter CH60_RS07145 PF03180 NLPA lipoprotein CH60_RS07160 PF13417 Glutathione S-transferase, N-terminal domain CH60_RS07160 PF00043 Glutathione S-transferase, C-terminal domain CH60_RS07165 PF07715 TonB-dependent Receptor Plug Domain CH60_RS07165 PF00593 TonB dependent receptor CH60_RS07170 PF00005 ABC transporter CH60_RS07175 PF01032 FecCD transport family CH60_RS07185 PF00324 Amino acid permease CH60_RS07190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS07190 PF03466 LysR substrate binding domain CH60_RS07195 PF03601 Conserved hypothetical protein 698 CH60_RS07210 PF01695 IstB-like ATP binding protein CH60_RS07215 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CH60_RS07215 PF09092 Lyase, N terminal CH60_RS07215 PF09093 Lyase, catalytic CH60_RS07215 PF02278 Polysaccharide lyase family 8, super-sandwich domain CH60_RS07240 PF00484 Carbonic anhydrase CH60_RS07255 PF03958 Bacterial type II/III secretion system short domain CH60_RS07255 PF00263 Bacterial type II and III secretion system protein CH60_RS07260 PF00437 Type II/IV secretion system protein CH60_RS07265 PF00482 Type II secretion system (T2SS), protein F CH60_RS07270 PF08334 Type II secretion system (T2SS), protein G CH60_RS07270 PF07963 Prokaryotic N-terminal methylation motif CH60_RS07285 PF07963 Prokaryotic N-terminal methylation motif CH60_RS07285 PF11612 Type II secretion system (T2SS), protein J CH60_RS07305 PF01478 Type IV leader peptidase family CH60_RS07305 PF06750 Bacterial Peptidase A24 N-terminal domain CH60_RS07325 PF02203 Tar ligand binding domain homologue CH60_RS07325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH60_RS07325 PF00672 HAMP domain CH60_RS07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS07340 PF03466 LysR substrate binding domain CH60_RS07345 PF07690 Major Facilitator Superfamily CH60_RS07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS07350 PF03466 LysR substrate binding domain CH60_RS07355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CH60_RS07355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH60_RS07360 PF00356 Bacterial regulatory proteins, lacI family CH60_RS07365 PF00384 Molybdopterin oxidoreductase CH60_RS07365 PF01568 Molydopterin dinucleotide binding domain CH60_RS07370 PF01553 Acyltransferase CH60_RS07370 PF00501 AMP-binding enzyme CH60_RS07370 PF13193 AMP-binding enzyme C-terminal domain CH60_RS07375 PF07690 Major Facilitator Superfamily CH60_RS07390 PF00248 Aldo/keto reductase family CH60_RS07395 PF02976 DNA mismatch repair enzyme MutH CH60_RS07410 PF00293 NUDIX domain CH60_RS07415 PF01590 GAF domain CH60_RS07415 PF05524 PEP-utilising enzyme, N-terminal CH60_RS07415 PF00391 PEP-utilising enzyme, mobile domain CH60_RS07415 PF02896 PEP-utilising enzyme, TIM barrel domain CH60_RS07420 PF01790 Prolipoprotein diacylglyceryl transferase CH60_RS07425 PF00303 Thymidylate synthase CH60_RS07455 PF17946 RecC C-terminal domain CH60_RS07460 PF00675 Insulinase (Peptidase family M16) CH60_RS07460 PF05193 Peptidase M16 inactive domain CH60_RS07460 PF16187 Middle or third domain of peptidase_M16 CH60_RS07465 PF00580 UvrD/REP helicase N-terminal domain CH60_RS07465 PF13361 UvrD-like helicase C-terminal domain CH60_RS07465 PF12705 PD-(D/E)XK nuclease superfamily CH60_RS07470 PF13538 UvrD-like helicase C-terminal domain CH60_RS07475 PF00583 Acetyltransferase (GNAT) family CH60_RS07475 PF00696 Amino acid kinase family CH60_RS07480 PF11741 AMIN domain CH60_RS07480 PF01520 N-acetylmuramoyl-L-alanine amidase CH60_RS07495 PF06725 3D domain CH60_RS07495 PF03562 MltA specific insert domain CH60_RS07500 PF00899 ThiF family CH60_RS07505 PF02657 Fe-S metabolism associated domain CH60_RS07510 PF00266 Aminotransferase class-V CH60_RS07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS07515 PF03466 LysR substrate binding domain CH60_RS07520 PF04241 Protein of unknown function (DUF423) CH60_RS07525 PF18125 RlmM ferredoxin-like domain CH60_RS07525 PF01728 FtsJ-like methyltransferase CH60_RS07530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH60_RS07530 PF01367 5'-3' exonuclease, C-terminal SAM fold CH60_RS07535 PF11892 Domain of unknown function (DUF3412) CH60_RS07535 PF03641 Possible lysine decarboxylase CH60_RS07535 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CH60_RS07540 PF14489 QueF-like protein CH60_RS07540 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CH60_RS07545 PF07348 Syd protein (SUKH-2) CH60_RS07550 PF01797 Transposase IS200 like CH60_RS07555 PF04287 tRNA pseudouridine synthase C CH60_RS07560 PF00849 RNA pseudouridylate synthase CH60_RS07565 PF00258 Flavodoxin CH60_RS07570 PF11944 Protein of unknown function (DUF3461) CH60_RS07575 PF00132 Bacterial transferase hexapeptide (six repeats) CH60_RS07575 PF14602 Hexapeptide repeat of succinyl-transferase CH60_RS07575 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CH60_RS07580 PF01842 ACT domain CH60_RS07580 PF08335 GlnD PII-uridylyltransferase CH60_RS07580 PF01966 HD domain CH60_RS07580 PF01909 Nucleotidyltransferase domain CH60_RS07585 PF00557 Metallopeptidase family M24 CH60_RS07590 PF00318 Ribosomal protein S2 CH60_RS07595 PF00889 Elongation factor TS CH60_RS07600 PF00696 Amino acid kinase family CH60_RS07605 PF01765 Ribosome recycling factor CH60_RS07610 PF13288 DXP reductoisomerase C-terminal domain CH60_RS07610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CH60_RS07610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CH60_RS07615 PF01255 Putative undecaprenyl diphosphate synthase CH60_RS07625 PF02163 Peptidase family M50 CH60_RS07625 PF17820 PDZ domain CH60_RS07630 PF07244 Surface antigen variable number repeat CH60_RS07630 PF01103 Surface antigen CH60_RS07635 PF03938 Outer membrane protein (OmpH-like) CH60_RS07640 PF00132 Bacterial transferase hexapeptide (six repeats) CH60_RS07640 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CH60_RS07645 PF07977 FabA-like domain CH60_RS07650 PF00132 Bacterial transferase hexapeptide (six repeats) CH60_RS07650 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CH60_RS07655 PF02684 Lipid-A-disaccharide synthetase CH60_RS07660 PF01351 Ribonuclease HII CH60_RS07665 PF07733 Bacterial DNA polymerase III alpha NTPase domain CH60_RS07665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CH60_RS07665 PF14579 Helix-hairpin-helix motif CH60_RS07665 PF01336 OB-fold nucleic acid binding domain CH60_RS07665 PF02811 PHP domain CH60_RS07670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CH60_RS07675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH60_RS07680 PF11734 TilS substrate C-terminal domain CH60_RS07680 PF01171 PP-loop family CH60_RS07680 PF09179 TilS substrate binding domain CH60_RS07685 PF00034 Cytochrome c CH60_RS07690 PF07073 Modulator of Rho-dependent transcription termination (ROF) CH60_RS07695 PF06786 Uncharacterised protein family (UPF0253) CH60_RS07700 PF07152 YaeQ protein CH60_RS07705 PF00472 RF-1 domain CH60_RS07710 PF04170 NlpE N-terminal domain CH60_RS07710 PF17185 NlpE C-terminal OB domain CH60_RS07715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH60_RS07715 PF04073 Aminoacyl-tRNA editing domain CH60_RS07715 PF03129 Anticodon binding domain CH60_RS07720 PF18389 TrmO C-terminal domain CH60_RS07720 PF01980 tRNA-methyltransferase O CH60_RS07725 PF16358 RcsF lipoprotein CH60_RS07730 PF03180 NLPA lipoprotein CH60_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS07740 PF09383 NIL domain CH60_RS07740 PF00005 ABC transporter CH60_RS07785 PF00248 Aldo/keto reductase family CH60_RS07795 PF03372 Endonuclease/Exonuclease/phosphatase family CH60_RS07800 PF01464 Transglycosylase SLT domain CH60_RS07800 PF01476 LysM domain CH60_RS07805 PF16123 Hydroxyacylglutathione hydrolase C-terminus CH60_RS07805 PF00753 Metallo-beta-lactamase superfamily CH60_RS07810 PF08241 Methyltransferase domain CH60_RS07815 PF00075 RNase H CH60_RS07820 PF00929 Exonuclease CH60_RS07830 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CH60_RS07845 PF01695 IstB-like ATP binding protein CH60_RS07850 PF01695 IstB-like ATP binding protein CH60_RS07870 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH60_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS07880 PF00571 CBS domain CH60_RS07880 PF00005 ABC transporter CH60_RS07885 PF00268 Ribonucleotide reductase, small chain CH60_RS07890 PF02867 Ribonucleotide reductase, barrel domain CH60_RS07890 PF00317 Ribonucleotide reductase, all-alpha domain CH60_RS07890 PF08343 Ribonucleotide reductase N-terminal CH60_RS07895 PF07972 NrdI Flavodoxin like CH60_RS07905 PF06392 Acid shock protein repeat CH60_RS07910 PF09400 Protein of unknown function (DUF2002) CH60_RS07915 PF00872 Transposase, Mutator family CH60_RS07920 PF00577 Outer membrane usher protein CH60_RS07920 PF13954 PapC N-terminal domain CH60_RS07920 PF13953 PapC C-terminal domain CH60_RS07930 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH60_RS07935 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH60_RS07950 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH60_RS07960 PF00665 Integrase core domain CH60_RS07960 PF02796 Helix-turn-helix domain of resolvase CH60_RS07965 PF01695 IstB-like ATP binding protein CH60_RS07975 PF06761 Intracellular multiplication and human macrophage-killing CH60_RS07975 PF14331 ImcF-related N-terminal domain CH60_RS07975 PF06744 Type VI secretion protein IcmF C-terminal CH60_RS07980 PF04717 Type VI secretion system, phage-baseplate injector CH60_RS07980 PF06715 Gp5 C-terminal repeat (3 copies) CH60_RS07995 PF07024 ImpE protein CH60_RS08020 PF08543 Phosphomethylpyrimidine kinase CH60_RS08035 PF00781 Diacylglycerol kinase catalytic domain CH60_RS08040 PF01136 Peptidase family U32 CH60_RS08040 PF16325 Peptidase family U32 C-terminal domain CH60_RS08045 PF07411 Domain of unknown function (DUF1508) CH60_RS08050 PF00486 Transcriptional regulatory protein, C terminal CH60_RS08050 PF00072 Response regulator receiver domain CH60_RS08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS08055 PF00672 HAMP domain CH60_RS08055 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS08060 PF07690 Major Facilitator Superfamily CH60_RS08065 PF00873 AcrB/AcrD/AcrF family CH60_RS08070 PF00873 AcrB/AcrD/AcrF family CH60_RS08075 PF13533 Biotin-lipoyl like CH60_RS08080 PF00005 ABC transporter CH60_RS08080 PF08402 TOBE domain CH60_RS08085 PF00155 Aminotransferase class I and II CH60_RS08085 PF00392 Bacterial regulatory proteins, gntR family CH60_RS08090 PF00202 Aminotransferase class-III CH60_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08110 PF00012 Hsp70 protein CH60_RS08115 PF00571 CBS domain CH60_RS08115 PF01769 Divalent cation transporter CH60_RS08115 PF03448 MgtE intracellular N domain CH60_RS08125 PF02541 Ppx/GppA phosphatase family CH60_RS08130 PF02503 Polyphosphate kinase middle domain CH60_RS08130 PF13090 Polyphosphate kinase C-terminal domain 2 CH60_RS08130 PF17941 Polyphosphate kinase C-terminal domain 1 CH60_RS08130 PF13089 Polyphosphate kinase N-terminal domain CH60_RS08135 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08140 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08145 PF00005 ABC transporter CH60_RS08160 PF13302 Acetyltransferase (GNAT) domain CH60_RS08165 PF00551 Formyl transferase CH60_RS08170 PF00586 AIR synthase related protein, N-terminal domain CH60_RS08170 PF02769 AIR synthase related protein, C-terminal domain CH60_RS08180 PF01797 Transposase IS200 like CH60_RS08185 PF00308 Bacterial dnaA protein CH60_RS08190 PF03960 ArsC family CH60_RS08195 PF07720 Tetratricopeptide repeat CH60_RS08195 PF01435 Peptidase family M48 CH60_RS08200 PF01594 AI-2E family transporter CH60_RS08220 PF00578 AhpC/TSA family CH60_RS08225 PF01842 ACT domain CH60_RS08230 PF00701 Dihydrodipicolinate synthetase family CH60_RS08235 PF06804 NlpB/DapX lipoprotein CH60_RS08245 PF01797 Transposase IS200 like CH60_RS08250 PF01259 SAICAR synthetase CH60_RS08255 PF04228 Putative neutral zinc metallopeptidase CH60_RS08260 PF04284 Protein of unknown function (DUF441) CH60_RS08265 PF17176 tRNA-binding domain CH60_RS08265 PF08351 Domain of unknown function (DUF1726) CH60_RS08265 PF05127 Helicase CH60_RS08265 PF13718 GNAT acetyltransferase 2 CH60_RS08270 PF13980 Uncharacterised protein family (UPF0370) CH60_RS08275 PF02557 D-alanyl-D-alanine carboxypeptidase CH60_RS08280 PF07687 Peptidase dimerisation domain CH60_RS08280 PF01546 Peptidase family M20/M25/M40 CH60_RS08285 PF03960 ArsC family CH60_RS08300 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08305 PF08402 TOBE domain CH60_RS08305 PF00005 ABC transporter CH60_RS08310 PF00884 Sulfatase CH60_RS08315 PF13186 Iron-sulfur cluster-binding domain CH60_RS08315 PF04055 Radical SAM superfamily CH60_RS08320 PF04307 LexA-binding, inner membrane-associated putative hydrolase CH60_RS08330 PF00873 AcrB/AcrD/AcrF family CH60_RS08340 PF00072 Response regulator receiver domain CH60_RS08340 PF00196 Bacterial regulatory proteins, luxR family CH60_RS08345 PF13187 4Fe-4S dicluster domain CH60_RS08345 PF12800 4Fe-4S binding domain CH60_RS08345 PF00037 4Fe-4S binding domain CH60_RS08350 PF03927 NapD protein CH60_RS08355 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH60_RS08355 PF00384 Molybdopterin oxidoreductase CH60_RS08355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH60_RS08355 PF01568 Molydopterin dinucleotide binding domain CH60_RS08360 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CH60_RS08365 PF03264 NapC/NirT cytochrome c family, N-terminal region CH60_RS08370 PF00293 NUDIX domain CH60_RS08375 PF03949 Malic enzyme, NAD binding domain CH60_RS08375 PF01515 Phosphate acetyl/butaryl transferase CH60_RS08375 PF00390 Malic enzyme, N-terminal domain CH60_RS08380 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CH60_RS08385 PF01218 Coproporphyrinogen III oxidase CH60_RS08390 PF00583 Acetyltransferase (GNAT) family CH60_RS08405 PF03212 Pertactin CH60_RS08405 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS08405 PF03797 Autotransporter beta-domain CH60_RS08405 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH60_RS08410 PF04076 Bacterial OB fold (BOF) protein CH60_RS08415 PF06572 Protein of unknown function (DUF1131) CH60_RS08420 PF04261 Dyp-type peroxidase family CH60_RS08425 PF00701 Dihydrodipicolinate synthetase family CH60_RS08430 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CH60_RS08435 PF12468 Type III secretion system leucine rich repeat protein CH60_RS08440 PF00480 ROK family CH60_RS08445 PF04074 YhcH/YjgK/YiaL CH60_RS08455 PF01418 Helix-turn-helix domain, rpiR family CH60_RS08455 PF01380 SIS domain CH60_RS08460 PF07690 Major Facilitator Superfamily CH60_RS08470 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08480 PF00005 ABC transporter CH60_RS08485 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS08495 PF00486 Transcriptional regulatory protein, C terminal CH60_RS08495 PF00072 Response regulator receiver domain CH60_RS08500 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS08500 PF00672 HAMP domain CH60_RS08510 PF00155 Aminotransferase class I and II CH60_RS08520 PF00557 Metallopeptidase family M24 CH60_RS08530 PF00474 Sodium:solute symporter family CH60_RS08535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH60_RS08535 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS08540 PF00005 ABC transporter CH60_RS08540 PF12704 MacB-like periplasmic core domain CH60_RS08540 PF02687 FtsX-like permease family CH60_RS08545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS08550 PF00072 Response regulator receiver domain CH60_RS08550 PF00486 Transcriptional regulatory protein, C terminal CH60_RS08555 PF00672 HAMP domain CH60_RS08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS08555 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS08555 PF16527 Two-component sensor protein CpxA, periplasmic domain CH60_RS08570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH60_RS08575 PF05524 PEP-utilising enzyme, N-terminal CH60_RS08575 PF02896 PEP-utilising enzyme, TIM barrel domain CH60_RS08575 PF00391 PEP-utilising enzyme, mobile domain CH60_RS08580 PF00381 PTS HPr component phosphorylation site CH60_RS08585 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS08595 PF04354 ZipA, C-terminal FtsZ-binding domain CH60_RS08600 PF00533 BRCA1 C Terminus (BRCT) domain CH60_RS08600 PF12826 Helix-hairpin-helix motif CH60_RS08600 PF01653 NAD-dependent DNA ligase adenylation domain CH60_RS08600 PF03120 NAD-dependent DNA ligase OB-fold domain CH60_RS08600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CH60_RS08605 PF12843 Putative quorum-sensing-regulated virulence factor CH60_RS08625 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH60_RS08650 PF01773 Na+ dependent nucleoside transporter N-terminus CH60_RS08650 PF07662 Na+ dependent nucleoside transporter C-terminus CH60_RS08650 PF07670 Nucleoside recognition CH60_RS08655 PF01566 Natural resistance-associated macrophage protein CH60_RS08665 PF00248 Aldo/keto reductase family CH60_RS08670 PF03466 LysR substrate binding domain CH60_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS08680 PF02685 Glucokinase CH60_RS08685 PF07350 Protein of unknown function (DUF1479) CH60_RS08690 PF00155 Aminotransferase class I and II CH60_RS08695 PF01292 Prokaryotic cytochrome b561 CH60_RS08705 PF03783 Curli production assembly/transport component CsgG CH60_RS08715 PF05643 Putative bacterial lipoprotein (DUF799) CH60_RS08725 PF02613 Nitrate reductase delta subunit CH60_RS08730 PF04976 DMSO reductase anchor subunit (DmsC) CH60_RS08735 PF13247 4Fe-4S dicluster domain CH60_RS08735 PF12800 4Fe-4S binding domain CH60_RS08740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH60_RS08740 PF01568 Molydopterin dinucleotide binding domain CH60_RS08740 PF00384 Molybdopterin oxidoreductase CH60_RS08750 PF05638 Type VI secretion system effector, Hcp CH60_RS08760 PF00005 ABC transporter CH60_RS08765 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08775 PF13406 Transglycosylase SLT domain CH60_RS08820 PF05947 Type VI secretion system, TssF CH60_RS08825 PF07724 AAA domain (Cdc48 subfamily) CH60_RS08825 PF17871 AAA lid domain CH60_RS08825 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS08825 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS08830 PF16970 Type-1 fimbrial protein, A CH60_RS08835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS08835 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS08840 PF00577 Outer membrane usher protein CH60_RS08840 PF13954 PapC N-terminal domain CH60_RS08840 PF13953 PapC C-terminal domain CH60_RS08845 PF00872 Transposase, Mutator family CH60_RS08850 PF06711 Protein of unknown function (DUF1198) CH60_RS08860 PF00313 'Cold-shock' DNA-binding domain CH60_RS08865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08875 PF12911 N-terminal TM domain of oligopeptide transport permease C CH60_RS08875 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS08880 PF00005 ABC transporter CH60_RS08885 PF00005 ABC transporter CH60_RS08890 PF00547 Urease, gamma subunit CH60_RS08895 PF00699 Urease beta subunit CH60_RS08900 PF01979 Amidohydrolase family CH60_RS08900 PF00449 Urease alpha-subunit, N-terminal domain CH60_RS08905 PF05194 UreE urease accessory protein, C-terminal domain CH60_RS08905 PF02814 UreE urease accessory protein, N-terminal domain CH60_RS08910 PF01730 UreF CH60_RS08915 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH60_RS08920 PF01774 UreD urease accessory protein CH60_RS08925 PF03253 Urea transporter CH60_RS08930 PF03824 High-affinity nickel-transport protein CH60_RS08935 PF06411 HdeA/HdeB family CH60_RS08945 PF07885 Ion channel CH60_RS08945 PF02254 TrkA-N domain CH60_RS08950 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH60_RS08955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH60_RS08965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH60_RS08970 PF02378 Phosphotransferase system, EIIC CH60_RS08975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CH60_RS08980 PF07883 Cupin domain CH60_RS08980 PF12833 Helix-turn-helix domain CH60_RS08985 PF04794 YdjC-like protein CH60_RS09000 PF03925 SeqA protein C-terminal domain CH60_RS09000 PF17206 SeqA protein N-terminal domain CH60_RS09005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH60_RS09005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH60_RS09005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH60_RS09005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH60_RS09025 PF00486 Transcriptional regulatory protein, C terminal CH60_RS09025 PF00072 Response regulator receiver domain CH60_RS09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS09030 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS09030 PF02702 Osmosensitive K+ channel His kinase sensor domain CH60_RS09030 PF13493 Domain of unknown function (DUF4118) CH60_RS09030 PF13492 GAF domain CH60_RS09035 PF02669 K+-transporting ATPase, c chain CH60_RS09045 PF03814 Potassium-transporting ATPase A subunit CH60_RS09060 PF10725 Protein of unknown function (DUF2517) CH60_RS09065 PF08349 Protein of unknown function (DUF1722) CH60_RS09070 PF03441 FAD binding domain of DNA photolyase CH60_RS09070 PF00875 DNA photolyase CH60_RS09075 PF02112 cAMP phosphodiesterases class-II CH60_RS09080 PF01784 NIF3 (NGG1p interacting factor 3) CH60_RS09090 PF02626 Carboxyltransferase domain, subdomain A and B CH60_RS09095 PF03746 LamB/YcsF family CH60_RS09110 PF01470 Pyroglutamyl peptidase CH60_RS09115 PF03167 Uracil DNA glycosylase superfamily CH60_RS09120 PF01228 Glycine radical CH60_RS09135 PF12796 Ankyrin repeats (3 copies) CH60_RS09145 PF05175 Methyltransferase small domain CH60_RS09150 PF02910 Fumarate reductase flavoprotein C-term CH60_RS09150 PF00890 FAD binding domain CH60_RS09155 PF08281 Sigma-70, region 4 CH60_RS09155 PF04542 Sigma-70 region 2 CH60_RS09160 PF03872 Anti sigma-E protein RseA, N-terminal domain CH60_RS09160 PF03873 Anti sigma-E protein RseA, C-terminal domain CH60_RS09165 PF17188 MucB/RseB C-terminal domain CH60_RS09165 PF03888 MucB/RseB N-terminal domain CH60_RS09180 PF06421 GTP-binding protein LepA C-terminus CH60_RS09180 PF03144 Elongation factor Tu domain 2 CH60_RS09180 PF00679 Elongation factor G C-terminus CH60_RS09180 PF00009 Elongation factor Tu GTP binding domain CH60_RS09185 PF10502 Signal peptidase, peptidase S26 CH60_RS09190 PF00035 Double-stranded RNA binding motif CH60_RS09190 PF14622 Ribonuclease-III-like CH60_RS09195 PF01926 50S ribosome-binding GTPase CH60_RS09195 PF07650 KH domain CH60_RS09200 PF02565 Recombination protein O C terminal CH60_RS09200 PF11967 Recombination protein O N terminal CH60_RS09205 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CH60_RS09210 PF01648 4'-phosphopantetheinyl transferase superfamily CH60_RS09225 PF12838 4Fe-4S dicluster domain CH60_RS09230 PF01380 SIS domain CH60_RS09230 PF01418 Helix-turn-helix domain, rpiR family CH60_RS09250 PF01695 IstB-like ATP binding protein CH60_RS09255 PF01380 SIS domain CH60_RS09255 PF01418 Helix-turn-helix domain, rpiR family CH60_RS09260 PF01380 SIS domain CH60_RS09270 PF14437 MafB19-like deaminase CH60_RS09275 PF01464 Transglycosylase SLT domain CH60_RS09275 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS09280 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CH60_RS09280 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CH60_RS09280 PF02769 AIR synthase related protein, C-terminal domain CH60_RS09305 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS09310 PF13942 YfhG lipoprotein CH60_RS09315 PF00158 Sigma-54 interaction domain CH60_RS09315 PF00072 Response regulator receiver domain CH60_RS09320 PF02540 NAD synthase CH60_RS09320 PF00795 Carbon-nitrogen hydrolase CH60_RS09325 PF00543 Nitrogen regulatory protein P-II CH60_RS09330 PF14503 YhfZ C-terminal domain CH60_RS09330 PF14502 Helix-turn-helix domain CH60_RS09335 PF14503 YhfZ C-terminal domain CH60_RS09335 PF14502 Helix-turn-helix domain CH60_RS09340 PF00175 Oxidoreductase NAD-binding domain CH60_RS09340 PF00042 Globin CH60_RS09340 PF00970 Oxidoreductase FAD-binding domain CH60_RS09345 PF00464 Serine hydroxymethyltransferase CH60_RS09355 PF13505 Outer membrane protein beta-barrel domain CH60_RS09360 PF12832 MFS_1 like family CH60_RS09365 PF00874 PRD domain CH60_RS09370 PF06226 Protein of unknown function (DUF1007) CH60_RS09375 PF03824 High-affinity nickel-transport protein CH60_RS09380 PF00459 Inositol monophosphatase family CH60_RS09385 PF00588 SpoU rRNA Methylase family CH60_RS09390 PF02082 Transcriptional regulator CH60_RS09395 PF00266 Aminotransferase class-V CH60_RS09400 PF01592 NifU-like N terminal domain CH60_RS09405 PF01521 Iron-sulphur cluster biosynthesis CH60_RS09410 PF07743 HSCB C-terminal oligomerisation domain CH60_RS09410 PF00226 DnaJ domain CH60_RS09415 PF00012 Hsp70 protein CH60_RS09420 PF00111 2Fe-2S iron-sulfur cluster binding domain CH60_RS09425 PF04384 Iron-sulphur cluster assembly CH60_RS09430 PF00883 Cytosol aminopeptidase family, catalytic domain CH60_RS09430 PF12404 Peptidase CH60_RS09435 PF07179 SseB protein N-terminal domain CH60_RS09435 PF14581 SseB protein C-terminal domain CH60_RS09445 PF03797 Autotransporter beta-domain CH60_RS09445 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH60_RS09445 PF03212 Pertactin CH60_RS09450 PF03212 Pertactin CH60_RS09450 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH60_RS09450 PF03797 Autotransporter beta-domain CH60_RS09465 PF00334 Nucleoside diphosphate kinase CH60_RS09470 PF04055 Radical SAM superfamily CH60_RS09480 PF13464 Domain of unknown function (DUF4115) CH60_RS09485 PF04551 GcpE protein CH60_RS09490 PF03129 Anticodon binding domain CH60_RS09490 PF13393 Histidyl-tRNA synthetase CH60_RS09495 PF09976 Tetratricopeptide repeat-like domain CH60_RS09500 PF13360 PQQ-like domain CH60_RS09505 PF01926 50S ribosome-binding GTPase CH60_RS09505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CH60_RS09515 PF07191 zinc-ribbons CH60_RS09520 PF13742 OB-fold nucleic acid binding domain CH60_RS09520 PF02601 Exonuclease VII, large subunit CH60_RS09525 PF00571 CBS domain CH60_RS09525 PF00478 IMP dehydrogenase / GMP reductase domain CH60_RS09535 PF00117 Glutamine amidotransferase class-I CH60_RS09535 PF00958 GMP synthase C terminal domain CH60_RS09535 PF02540 NAD synthase CH60_RS09545 PF01797 Transposase IS200 like CH60_RS09550 PF05638 Type VI secretion system effector, Hcp CH60_RS09580 PF00872 Transposase, Mutator family CH60_RS09585 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS09590 PF14002 YniB-like protein CH60_RS09595 PF03881 Fructosamine kinase CH60_RS09605 PF00950 ABC 3 transport family CH60_RS09610 PF00950 ABC 3 transport family CH60_RS09615 PF00005 ABC transporter CH60_RS09620 PF01297 Zinc-uptake complex component A periplasmic CH60_RS09625 PF01464 Transglycosylase SLT domain CH60_RS09630 PF01914 MarC family integral membrane protein CH60_RS09645 PF13619 KTSC domain CH60_RS09650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH60_RS09650 PF03129 Anticodon binding domain CH60_RS09650 PF02824 TGS domain CH60_RS09650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH60_RS09655 PF00707 Translation initiation factor IF-3, C-terminal domain CH60_RS09655 PF05198 Translation initiation factor IF-3, N-terminal domain CH60_RS09660 PF01632 Ribosomal protein L35 CH60_RS09665 PF00453 Ribosomal protein L20 CH60_RS09670 PF01409 tRNA synthetases class II core domain (F) CH60_RS09670 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CH60_RS09675 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CH60_RS09675 PF03484 tRNA synthetase B5 domain CH60_RS09675 PF03483 B3/4 domain CH60_RS09675 PF01588 Putative tRNA binding domain CH60_RS09675 PF03147 Ferredoxin-fold anticodon binding domain CH60_RS09680 PF00216 Bacterial DNA-binding protein CH60_RS09690 PF01032 FecCD transport family CH60_RS09695 PF00255 Glutathione peroxidase CH60_RS09700 PF00005 ABC transporter CH60_RS09705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH60_RS09710 PF00535 Glycosyl transferase family 2 CH60_RS09715 PF00551 Formyl transferase CH60_RS09715 PF02911 Formyl transferase, C-terminal domain CH60_RS09715 PF01370 NAD dependent epimerase/dehydratase family CH60_RS09720 PF01522 Polysaccharide deacetylase CH60_RS09725 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CH60_RS09730 PF00892 EamA-like transporter family CH60_RS09740 PF00877 NlpC/P60 family CH60_RS09745 PF03099 Biotin/lipoate A/B protein ligase family CH60_RS09745 PF10437 Bacterial lipoate protein ligase C-terminus CH60_RS09755 PF00793 DAHP synthetase I family CH60_RS09760 PF03618 Kinase/pyrophosphorylase CH60_RS09765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CH60_RS09765 PF00391 PEP-utilising enzyme, mobile domain CH60_RS09765 PF02896 PEP-utilising enzyme, TIM barrel domain CH60_RS09770 PF01594 AI-2E family transporter CH60_RS09775 PF13183 4Fe-4S dicluster domain CH60_RS09775 PF02913 FAD linked oxidases, C-terminal domain CH60_RS09775 PF01565 FAD binding domain CH60_RS09780 PF03061 Thioesterase superfamily CH60_RS09790 PF01521 Iron-sulphur cluster biosynthesis CH60_RS09795 PF01458 Uncharacterized protein family (UPF0051) CH60_RS09800 PF00005 ABC transporter CH60_RS09805 PF01458 Uncharacterized protein family (UPF0051) CH60_RS09810 PF00266 Aminotransferase class-V CH60_RS09815 PF02657 Fe-S metabolism associated domain CH60_RS09820 PF03734 L,D-transpeptidase catalytic domain CH60_RS09820 PF01476 LysM domain CH60_RS09820 PF17969 L,D-transpeptidase C-terminal domain CH60_RS09825 PF01695 IstB-like ATP binding protein CH60_RS09835 PF02796 Helix-turn-helix domain of resolvase CH60_RS09835 PF00665 Integrase core domain CH60_RS09850 PF04728 Lipoprotein leucine-zipper CH60_RS09855 PF00224 Pyruvate kinase, barrel domain CH60_RS09855 PF02887 Pyruvate kinase, alpha/beta domain CH60_RS09870 PF01554 MatE CH60_RS09875 PF00677 Lumazine binding domain CH60_RS09885 PF07690 Major Facilitator Superfamily CH60_RS09890 PF03466 LysR substrate binding domain CH60_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS09895 PF00356 Bacterial regulatory proteins, lacI family CH60_RS09900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH60_RS09900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH60_RS09905 PF00877 NlpC/P60 family CH60_RS09915 PF00462 Glutaredoxin CH60_RS09920 PF00929 Exonuclease CH60_RS09925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH60_RS09930 PF14431 YwqJ-like deaminase CH60_RS09930 PF18807 Tripartite Tc toxins repeat CH60_RS09935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH60_RS09940 PF00440 Bacterial regulatory proteins, tetR family CH60_RS09940 PF16925 Tetracyclin repressor-like, C-terminal domain CH60_RS09945 PF00884 Sulfatase CH60_RS09945 PF08019 Phosphoethanolamine transferase EptA/EptB CH60_RS09950 PF06945 Protein of unknown function (DUF1289) CH60_RS09955 PF00248 Aldo/keto reductase family CH60_RS09965 PF05433 Glycine zipper 2TM domain CH60_RS09970 PF03702 Anhydro-N-acetylmuramic acid kinase CH60_RS09975 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CH60_RS09980 PF01243 Pyridoxamine 5'-phosphate oxidase CH60_RS09980 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CH60_RS09985 PF01479 S4 domain CH60_RS09985 PF00579 tRNA synthetases class I (W and Y) CH60_RS09990 PF08543 Phosphomethylpyrimidine kinase CH60_RS09995 PF00043 Glutathione S-transferase, C-terminal domain CH60_RS09995 PF02798 Glutathione S-transferase, N-terminal domain CH60_RS10000 PF11656 YjbD family (DUF3811) CH60_RS10005 PF04893 Yip1 domain CH60_RS10010 PF00854 POT family CH60_RS10020 PF00005 ABC transporter CH60_RS10025 PF00005 ABC transporter CH60_RS10025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS10030 PF12911 N-terminal TM domain of oligopeptide transport permease C CH60_RS10030 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS10035 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS10040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS10060 PF18024 Helix-turn-helix domain CH60_RS10060 PF00158 Sigma-54 interaction domain CH60_RS10065 PF09722 Protein of unknown function (DUF2384) CH60_RS10070 PF08808 RES domain CH60_RS10075 PF05128 Domain of unknown function (DUF697) CH60_RS10080 PF04317 YcjX-like family, DUF463 CH60_RS10090 PF04024 PspC domain CH60_RS10095 PF06667 Phage shock protein B CH60_RS10100 PF04012 PspA/IM30 family CH60_RS10105 PF00158 Sigma-54 interaction domain CH60_RS10105 PF02954 Bacterial regulatory protein, Fis family CH60_RS10110 PF01797 Transposase IS200 like CH60_RS10115 PF08534 Redoxin CH60_RS10120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH60_RS10120 PF13378 Enolase C-terminal domain-like CH60_RS10125 PF00246 Zinc carboxypeptidase CH60_RS10130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS10135 PF01544 CorA-like Mg2+ transporter protein CH60_RS10150 PF07859 alpha/beta hydrolase fold CH60_RS10155 PF01171 PP-loop family CH60_RS10160 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CH60_RS10160 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CH60_RS10160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH60_RS10160 PF10371 Domain of unknown function CH60_RS10160 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CH60_RS10165 PF00893 Small Multidrug Resistance protein CH60_RS10170 PF02308 MgtC family CH60_RS10175 PF03891 Domain of unknown function (DUF333) CH60_RS10180 PF03724 META domain CH60_RS10185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH60_RS10185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH60_RS10190 PF11739 Dicarboxylate transport CH60_RS10195 PF13617 YnbE-like lipoprotein CH60_RS10200 PF07027 Protein of unknown function (DUF1318) CH60_RS10205 PF01232 Mannitol dehydrogenase Rossmann domain CH60_RS10205 PF08125 Mannitol dehydrogenase C-terminal domain CH60_RS10210 PF00325 Bacterial regulatory proteins, crp family CH60_RS10210 PF04198 Putative sugar-binding domain CH60_RS10215 PF02525 Flavodoxin-like fold CH60_RS10220 PF04408 Helicase associated domain (HA2) CH60_RS10220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CH60_RS10220 PF00271 Helicase conserved C-terminal domain CH60_RS10220 PF11898 Domain of unknown function (DUF3418) CH60_RS10220 PF00270 DEAD/DEAH box helicase CH60_RS10235 PF00089 Trypsin CH60_RS10250 PF01292 Prokaryotic cytochrome b561 CH60_RS10255 PF04264 YceI-like domain CH60_RS10270 PF14431 YwqJ-like deaminase CH60_RS10270 PF18807 Tripartite Tc toxins repeat CH60_RS10280 PF01797 Transposase IS200 like CH60_RS10285 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CH60_RS10290 PF00672 HAMP domain CH60_RS10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS10290 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS10295 PF00486 Transcriptional regulatory protein, C terminal CH60_RS10295 PF00072 Response regulator receiver domain CH60_RS10305 PF13520 Amino acid permease CH60_RS10310 PF07338 Protein of unknown function (DUF1471) CH60_RS10320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CH60_RS10320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CH60_RS10320 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CH60_RS10325 PF02233 NAD(P) transhydrogenase beta subunit CH60_RS10330 PF00582 Universal stress protein family CH60_RS10335 PF13545 Crp-like helix-turn-helix domain CH60_RS10335 PF00027 Cyclic nucleotide-binding domain CH60_RS10340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH60_RS10340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH60_RS10345 PF00245 Alkaline phosphatase CH60_RS10360 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS10365 PF01842 ACT domain CH60_RS10370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH60_RS10370 PF00205 Thiamine pyrophosphate enzyme, central domain CH60_RS10370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH60_RS10395 PF01048 Phosphorylase superfamily CH60_RS10395 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CH60_RS10400 PF00005 ABC transporter CH60_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS10410 PF09084 NMT1/THI5 like CH60_RS10415 PF13407 Periplasmic binding protein domain CH60_RS10425 PF00356 Bacterial regulatory proteins, lacI family CH60_RS10435 PF00654 Voltage gated chloride channel CH60_RS10445 PF00480 ROK family CH60_RS10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS10450 PF03466 LysR substrate binding domain CH60_RS10460 PF05472 DNA replication terminus site-binding protein (Ter protein) CH60_RS10465 PF00206 Lyase CH60_RS10465 PF10415 Fumarase C C-terminus CH60_RS10470 PF01238 Phosphomannose isomerase type I CH60_RS10475 PF06097 Bacterial protein of unknown function (DUF945) CH60_RS10485 PF13593 SBF-like CPA transporter family (DUF4137) CH60_RS10490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH60_RS10490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH60_RS10500 PF02653 Branched-chain amino acid transport system / permease component CH60_RS10505 PF00005 ABC transporter CH60_RS10510 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH60_RS10515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS10520 PF02610 L-arabinose isomerase CH60_RS10520 PF11762 L-arabinose isomerase C-terminal domain CH60_RS10525 PF00664 ABC transporter transmembrane region CH60_RS10525 PF00005 ABC transporter CH60_RS10525 PF03412 Peptidase C39 family CH60_RS10535 PF13533 Biotin-lipoyl like CH60_RS10540 PF00664 ABC transporter transmembrane region CH60_RS10540 PF00005 ABC transporter CH60_RS10545 PF00005 ABC transporter CH60_RS10545 PF03412 Peptidase C39 family CH60_RS10545 PF00664 ABC transporter transmembrane region CH60_RS10550 PF10754 Protein of unknown function (DUF2569) CH60_RS10555 PF02508 Rnf-Nqr subunit, membrane protein CH60_RS10560 PF04060 Putative Fe-S cluster CH60_RS10565 PF13375 RnfC Barrel sandwich hybrid domain CH60_RS10565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH60_RS10565 PF10531 SLBB domain CH60_RS10565 PF13237 4Fe-4S dicluster domain CH60_RS10570 PF12833 Helix-turn-helix domain CH60_RS10570 PF06445 GyrI-like small molecule binding domain CH60_RS10575 PF03116 NQR2, RnfD, RnfE family CH60_RS10580 PF04205 FMN-binding domain CH60_RS10585 PF02508 Rnf-Nqr subunit, membrane protein CH60_RS10590 PF00730 HhH-GPD superfamily base excision DNA repair protein CH60_RS10590 PF00633 Helix-hairpin-helix motif CH60_RS10590 PF10576 Iron-sulfur binding domain of endonuclease III CH60_RS10595 PF01370 NAD dependent epimerase/dehydratase family CH60_RS10600 PF07690 Major Facilitator Superfamily CH60_RS10605 PF17876 Cold shock domain CH60_RS10605 PF00575 S1 RNA binding domain CH60_RS10605 PF00773 RNB domain CH60_RS10605 PF08206 Ribonuclease B OB domain CH60_RS10610 PF13722 5TM C-terminal transporter carbon starvation CstA CH60_RS10610 PF02554 Carbon starvation protein CstA CH60_RS10615 PF04328 Selenoprotein, putative CH60_RS10620 PF00923 Transaldolase/Fructose-6-phosphate aldolase CH60_RS10630 PF00596 Class II Aldolase and Adducin N-terminal domain CH60_RS10635 PF05433 Glycine zipper 2TM domain CH60_RS10640 PF01253 Translation initiation factor SUI1 CH60_RS10645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CH60_RS10655 PF18073 Rubredoxin metal binding domain CH60_RS10660 PF06305 Lipopolysaccharide assembly protein A domain CH60_RS10665 PF01569 PAP2 superfamily CH60_RS10670 PF00925 GTP cyclohydrolase II CH60_RS10675 PF00330 Aconitase family (aconitate hydratase) CH60_RS10675 PF00694 Aconitase C-terminal domain CH60_RS10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS10685 PF03466 LysR substrate binding domain CH60_RS10690 PF01396 Topoisomerase DNA binding C4 zinc finger CH60_RS10690 PF01751 Toprim domain CH60_RS10690 PF08272 Topoisomerase I zinc-ribbon-like CH60_RS10690 PF01131 DNA topoisomerase CH60_RS10700 PF10692 Protein of unknown function (DUF2498) CH60_RS10705 PF08496 Peptidase family S49 N-terminal CH60_RS10705 PF01343 Peptidase family S49 CH60_RS10710 PF00106 short chain dehydrogenase CH60_RS10715 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CH60_RS10720 PF01479 S4 domain CH60_RS10720 PF00849 RNA pseudouridylate synthase CH60_RS10725 PF01300 Telomere recombination CH60_RS10730 PF02811 PHP domain CH60_RS10745 PF00425 chorismate binding enzyme CH60_RS10745 PF04715 Anthranilate synthase component I, N terminal region CH60_RS10750 PF00117 Glutamine amidotransferase class-I CH60_RS10755 PF02885 Glycosyl transferase family, helical bundle domain CH60_RS10755 PF00591 Glycosyl transferase family, a/b domain CH60_RS10760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CH60_RS10760 PF00218 Indole-3-glycerol phosphate synthase CH60_RS10765 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS10770 PF00290 Tryptophan synthase alpha chain CH60_RS10780 PF03922 OmpW family CH60_RS10805 PF04279 Intracellular septation protein A CH60_RS10810 PF03061 Thioesterase superfamily CH60_RS10820 PF03544 Gram-negative bacterial TonB protein C-terminal CH60_RS10825 PF03795 YCII-related domain CH60_RS10840 PF13505 Outer membrane protein beta-barrel domain CH60_RS10845 PF13091 PLD-like domain CH60_RS10845 PF13396 Phospholipase_D-nuclease N-terminal CH60_RS10850 PF04269 Protein of unknown function, DUF440 CH60_RS10865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS10865 PF00005 ABC transporter CH60_RS10870 PF00005 ABC transporter CH60_RS10870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS10875 PF12911 N-terminal TM domain of oligopeptide transport permease C CH60_RS10875 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS10880 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS10885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS10890 PF01914 MarC family integral membrane protein CH60_RS10895 PF00465 Iron-containing alcohol dehydrogenase CH60_RS10895 PF00171 Aldehyde dehydrogenase family CH60_RS10900 PF00265 Thymidine kinase CH60_RS10905 PF00816 H-NS histone family CH60_RS10910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH60_RS10910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH60_RS10910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH60_RS10915 PF00072 Response regulator receiver domain CH60_RS10920 PF02810 SEC-C motif CH60_RS10925 PF01842 ACT domain CH60_RS10925 PF00551 Formyl transferase CH60_RS10935 PF03466 LysR substrate binding domain CH60_RS10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS10940 PF03372 Endonuclease/Exonuclease/phosphatase family CH60_RS10945 PF00293 NUDIX domain CH60_RS10950 PF07383 Protein of unknown function (DUF1496) CH60_RS10955 PF01751 Toprim domain CH60_RS10955 PF01131 DNA topoisomerase CH60_RS10960 PF02769 AIR synthase related protein, C-terminal domain CH60_RS10960 PF00586 AIR synthase related protein, N-terminal domain CH60_RS10965 PF00881 Nitroreductase family CH60_RS10970 PF01343 Peptidase family S49 CH60_RS10975 PF00710 Asparaginase, N-terminal CH60_RS10975 PF17763 Glutaminase/Asparaginase C-terminal domain CH60_RS10980 PF00857 Isochorismatase family CH60_RS10985 PF07023 Protein of unknown function (DUF1315) CH60_RS10990 PF01641 SelR domain CH60_RS10995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH60_RS10995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH60_RS11000 PF01263 Aldose 1-epimerase CH60_RS11005 PF06629 MltA-interacting protein MipA CH60_RS11010 PF08298 PrkA AAA domain CH60_RS11010 PF06798 PrkA serine protein kinase C-terminal domain CH60_RS11015 PF04285 Protein of unknown function (DUF444) CH60_RS11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS11025 PF03466 LysR substrate binding domain CH60_RS11030 PF02678 Pirin CH60_RS11030 PF05726 Pirin C-terminal cupin domain CH60_RS11035 PF07690 Major Facilitator Superfamily CH60_RS11040 PF01266 FAD dependent oxidoreductase CH60_RS11045 PF04293 SpoVR like protein CH60_RS11050 PF07840 FadR C-terminal domain CH60_RS11050 PF00392 Bacterial regulatory proteins, gntR family CH60_RS11055 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CH60_RS11060 PF02600 Disulfide bond formation protein DsbB CH60_RS11075 PF00266 Aminotransferase class-V CH60_RS11110 PF06530 Phage antitermination protein Q CH60_RS11120 PF05772 NinB protein CH60_RS11140 PF02796 Helix-turn-helix domain of resolvase CH60_RS11140 PF00665 Integrase core domain CH60_RS11145 PF00589 Phage integrase family CH60_RS11145 PF12167 Arm DNA-binding domain CH60_RS11150 PF03692 Putative zinc- or iron-chelating domain CH60_RS11155 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH60_RS11160 PF13406 Transglycosylase SLT domain CH60_RS11165 PF05166 YcgL domain CH60_RS11170 PF03775 Septum formation inhibitor MinC, C-terminal domain CH60_RS11170 PF05209 Septum formation inhibitor MinC, N-terminal domain CH60_RS11175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CH60_RS11180 PF03776 Septum formation topological specificity factor MinE CH60_RS11185 PF01612 3'-5' exonuclease CH60_RS11185 PF00570 HRDC domain CH60_RS11190 PF13193 AMP-binding enzyme C-terminal domain CH60_RS11190 PF00501 AMP-binding enzyme CH60_RS11195 PF03843 Outer membrane lipoprotein Slp family CH60_RS11200 PF00814 Glycoprotease family CH60_RS11205 PF13307 Helicase C-terminal domain CH60_RS11205 PF04851 Type III restriction enzyme, res subunit CH60_RS11210 PF01042 Endoribonuclease L-PSP CH60_RS11215 PF00893 Small Multidrug Resistance protein CH60_RS11220 PF00893 Small Multidrug Resistance protein CH60_RS11225 PF01081 KDPG and KHG aldolase CH60_RS11235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CH60_RS11235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CH60_RS11240 PF01418 Helix-turn-helix domain, rpiR family CH60_RS11240 PF01380 SIS domain CH60_RS11245 PF00224 Pyruvate kinase, barrel domain CH60_RS11245 PF02887 Pyruvate kinase, alpha/beta domain CH60_RS11250 PF03279 Bacterial lipid A biosynthesis acyltransferase CH60_RS11255 PF01476 LysM domain CH60_RS11255 PF08525 Opacity-associated protein A N-terminal motif CH60_RS11255 PF01551 Peptidase family M23 CH60_RS11260 PF01297 Zinc-uptake complex component A periplasmic CH60_RS11265 PF00005 ABC transporter CH60_RS11270 PF00950 ABC 3 transport family CH60_RS11275 PF17864 RuvB AAA lid domain CH60_RS11275 PF05496 Holliday junction DNA helicase RuvB P-loop domain CH60_RS11275 PF05491 RuvB C-terminal winged helix domain CH60_RS11280 PF01330 RuvA N terminal domain CH60_RS11280 PF07499 RuvA, C-terminal domain CH60_RS11285 PF02075 Crossover junction endodeoxyribonuclease RuvC CH60_RS11290 PF01709 Transcriptional regulator CH60_RS11295 PF00293 NUDIX domain CH60_RS11300 PF02938 GAD domain CH60_RS11300 PF00152 tRNA synthetases class II (D, K and N) CH60_RS11300 PF01336 OB-fold nucleic acid binding domain CH60_RS11310 PF01904 Protein of unknown function DUF72 CH60_RS11315 PF01124 MAPEG family CH60_RS11320 PF13649 Methyltransferase domain CH60_RS11325 PF08003 Protein of unknown function (DUF1698) CH60_RS11330 PF03932 CutC family CH60_RS11335 PF06185 YecM protein CH60_RS11340 PF05746 DALR anticodon binding domain CH60_RS11340 PF03485 Arginyl tRNA synthetase N terminal domain CH60_RS11340 PF00750 tRNA synthetases class I (R) CH60_RS11350 PF08479 POTRA domain, ShlB-type CH60_RS11350 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH60_RS11350 PF17287 POTRA domain CH60_RS11355 PF03023 Lipid II flippase MurJ CH60_RS11360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH60_RS11365 PF13302 Acetyltransferase (GNAT) domain CH60_RS11370 PF07690 Major Facilitator Superfamily CH60_RS11375 PF07273 Protein of unknown function (DUF1439) CH60_RS11380 PF02613 Nitrate reductase delta subunit CH60_RS11385 PF02811 PHP domain CH60_RS11395 PF01325 Iron dependent repressor, N-terminal DNA binding domain CH60_RS11395 PF00480 ROK family CH60_RS11400 PF03009 Glycerophosphoryl diester phosphodiesterase family CH60_RS11405 PF00005 ABC transporter CH60_RS11405 PF08402 TOBE domain CH60_RS11415 PF08402 TOBE domain CH60_RS11415 PF00005 ABC transporter CH60_RS11420 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS11425 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS11435 PF03009 Glycerophosphoryl diester phosphodiesterase family CH60_RS11450 PF00916 Sulfate permease family CH60_RS11450 PF01740 STAS domain CH60_RS11455 PF00793 DAHP synthetase I family CH60_RS11460 PF13369 Transglutaminase-like superfamily CH60_RS11465 PF04247 Invasion gene expression up-regulator, SirB CH60_RS11470 PF13847 Methyltransferase domain CH60_RS11470 PF17827 PrmC N-terminal domain CH60_RS11475 PF03462 PCRF domain CH60_RS11475 PF00472 RF-1 domain CH60_RS11480 PF01488 Shikimate / quinate 5-dehydrogenase CH60_RS11480 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CH60_RS11480 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CH60_RS11485 PF03550 Outer membrane lipoprotein LolB CH60_RS11490 PF00288 GHMP kinases N terminal domain CH60_RS11490 PF08544 GHMP kinases C terminal CH60_RS11500 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CH60_RS11500 PF14572 Phosphoribosyl synthetase-associated domain CH60_RS11510 PF10762 Protein of unknown function (DUF2583) CH60_RS11515 PF01195 Peptidyl-tRNA hydrolase CH60_RS11520 PF06071 Protein of unknown function (DUF933) CH60_RS11520 PF01926 50S ribosome-binding GTPase CH60_RS11565 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CH60_RS11570 PF00072 Response regulator receiver domain CH60_RS11570 PF00486 Transcriptional regulatory protein, C terminal CH60_RS11575 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS11575 PF00672 HAMP domain CH60_RS11615 PF08242 Methyltransferase domain CH60_RS11640 PF00872 Transposase, Mutator family CH60_RS11680 PF01370 NAD dependent epimerase/dehydratase family CH60_RS11685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH60_RS11685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH60_RS11690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH60_RS11690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH60_RS11700 PF05962 HutD CH60_RS11705 PF01979 Amidohydrolase family CH60_RS11710 PF07702 UTRA domain CH60_RS11710 PF00392 Bacterial regulatory proteins, gntR family CH60_RS11720 PF01695 IstB-like ATP binding protein CH60_RS11745 PF00842 Alanine racemase, C-terminal domain CH60_RS11745 PF01168 Alanine racemase, N-terminal domain CH60_RS11750 PF00872 Transposase, Mutator family CH60_RS11760 PF05662 Coiled stalk of trimeric autotransporter adhesin CH60_RS11760 PF05658 Head domain of trimeric autotransporter adhesin CH60_RS11760 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS11760 PF03895 YadA-like membrane anchor domain CH60_RS11765 PF05658 Head domain of trimeric autotransporter adhesin CH60_RS11765 PF05662 Coiled stalk of trimeric autotransporter adhesin CH60_RS11765 PF03895 YadA-like membrane anchor domain CH60_RS11765 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS11770 PF01510 N-acetylmuramoyl-L-alanine amidase CH60_RS11780 PF04344 Chemotaxis phosphatase, CheZ CH60_RS11785 PF00072 Response regulator receiver domain CH60_RS11790 PF00072 Response regulator receiver domain CH60_RS11790 PF01339 CheB methylesterase CH60_RS11795 PF03705 CheR methyltransferase, all-alpha domain CH60_RS11795 PF01739 CheR methyltransferase, SAM binding domain CH60_RS11800 PF00672 HAMP domain CH60_RS11800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH60_RS11800 PF02203 Tar ligand binding domain homologue CH60_RS11805 PF02203 Tar ligand binding domain homologue CH60_RS11805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH60_RS11805 PF00672 HAMP domain CH60_RS11820 PF12951 Passenger-associated-transport-repeat CH60_RS11825 PF08348 YheO-like PAS domain CH60_RS11825 PF13309 HTH domain CH60_RS11835 PF01042 Endoribonuclease L-PSP CH60_RS11840 PF07690 Major Facilitator Superfamily CH60_RS11845 PF01584 CheW-like domain CH60_RS11850 PF01584 CheW-like domain CH60_RS11850 PF02895 Signal transducing histidine kinase, homodimeric domain CH60_RS11850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS11850 PF01627 Hpt domain CH60_RS11850 PF09078 CheY binding CH60_RS11855 PF00691 OmpA family CH60_RS11855 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH60_RS11860 PF01618 MotA/TolQ/ExbB proton channel family CH60_RS11865 PF05280 Flagellar transcriptional activator (FlhC) CH60_RS11875 PF00689 Cation transporting ATPase, C-terminus CH60_RS11875 PF00690 Cation transporter/ATPase, N-terminus CH60_RS11880 PF02308 MgtC family CH60_RS11895 PF10781 Dextransucrase DSRB CH60_RS11900 PF00313 'Cold-shock' DNA-binding domain CH60_RS11905 PF02837 Glycosyl hydrolases family 2, sugar binding domain CH60_RS11905 PF02929 Beta galactosidase small chain CH60_RS11905 PF16353 Domain of unknown function(DUF4981) CH60_RS11905 PF00703 Glycosyl hydrolases family 2 CH60_RS11905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CH60_RS11910 PF00550 Phosphopantetheine attachment site CH60_RS11910 PF00698 Acyl transferase domain CH60_RS11910 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS11910 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS11910 PF16197 Ketoacyl-synthetase C-terminal extension CH60_RS11910 PF08659 KR domain CH60_RS11910 PF00107 Zinc-binding dehydrogenase CH60_RS11910 PF14765 Polyketide synthase dehydratase CH60_RS11910 PF08240 Alcohol dehydrogenase GroES-like domain CH60_RS11915 PF10777 Inner membrane protein YlaC CH60_RS11920 PF01037 Lrp/AsnC ligand binding domain CH60_RS11920 PF13404 AsnC-type helix-turn-helix domain CH60_RS11930 PF14001 YdfZ protein CH60_RS11935 PF00328 Histidine phosphatase superfamily (branch 2) CH60_RS11945 PF01638 HxlR-like helix-turn-helix CH60_RS11950 PF05368 NmrA-like family CH60_RS11955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH60_RS11955 PF08447 PAS fold CH60_RS11965 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH60_RS11965 PF00356 Bacterial regulatory proteins, lacI family CH60_RS11970 PF00180 Isocitrate/isopropylmalate dehydrogenase CH60_RS11975 PF00849 RNA pseudouridylate synthase CH60_RS11980 PF00293 NUDIX domain CH60_RS11990 PF04356 Protein of unknown function (DUF489) CH60_RS11995 PF00206 Lyase CH60_RS11995 PF08328 Adenylosuccinate lyase C-terminal CH60_RS12005 PF00486 Transcriptional regulatory protein, C terminal CH60_RS12005 PF00072 Response regulator receiver domain CH60_RS12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS12010 PF08918 PhoQ Sensor CH60_RS12015 PF08007 Cupin superfamily protein CH60_RS12020 PF07687 Peptidase dimerisation domain CH60_RS12020 PF01546 Peptidase family M20/M25/M40 CH60_RS12025 PF02146 Sir2 family CH60_RS12030 PF00480 ROK family CH60_RS12035 PF12704 MacB-like periplasmic core domain CH60_RS12035 PF02687 FtsX-like permease family CH60_RS12040 PF00005 ABC transporter CH60_RS12045 PF02687 FtsX-like permease family CH60_RS12045 PF12704 MacB-like periplasmic core domain CH60_RS12050 PF00270 DEAD/DEAH box helicase CH60_RS12050 PF02559 CarD-like/TRCF domain CH60_RS12050 PF03461 TRCF domain CH60_RS12050 PF00271 Helicase conserved C-terminal domain CH60_RS12050 PF17757 UvrB interaction domain CH60_RS12055 PF05433 Glycine zipper 2TM domain CH60_RS12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS12080 PF05728 Uncharacterised protein family (UPF0227) CH60_RS12085 PF00933 Glycosyl hydrolase family 3 N terminal domain CH60_RS12090 PF01636 Phosphotransferase enzyme family CH60_RS12095 PF13036 Peptidoglycan-synthase activator LpoB CH60_RS12095 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH60_RS12100 PF07233 Protein of unknown function (DUF1425) CH60_RS12105 PF01230 HIT domain CH60_RS12110 PF08501 Shikimate dehydrogenase substrate binding domain CH60_RS12120 PF02378 Phosphotransferase system, EIIC CH60_RS12120 PF00367 phosphotransferase system, EIIB CH60_RS12125 PF01026 TatD related DNase CH60_RS12130 PF09115 DNA polymerase III, delta subunit, C terminal CH60_RS12135 PF02223 Thymidylate kinase CH60_RS12140 PF02618 YceG-like family CH60_RS12145 PF01063 Amino-transferase class IV CH60_RS12150 PF01797 Transposase IS200 like CH60_RS12155 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS12155 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS12160 PF00550 Phosphopantetheine attachment site CH60_RS12170 PF00698 Acyl transferase domain CH60_RS12175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH60_RS12175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH60_RS12180 PF02504 Fatty acid synthesis protein CH60_RS12185 PF01783 Ribosomal L32p protein family CH60_RS12190 PF02620 Large ribosomal RNA subunit accumulation protein YceD CH60_RS12195 PF02545 Maf-like protein CH60_RS12200 PF00849 RNA pseudouridylate synthase CH60_RS12200 PF01479 S4 domain CH60_RS12205 PF00575 S1 RNA binding domain CH60_RS12205 PF10150 Ribonuclease E/G family CH60_RS12205 PF12111 Polyribonucleotide phosphorylase C terminal CH60_RS12210 PF03992 Antibiotic biosynthesis monooxygenase CH60_RS12215 PF01979 Amidohydrolase family CH60_RS12220 PF06183 DinI-like family CH60_RS12230 PF13991 BssS protein family CH60_RS12235 PF00872 Transposase, Mutator family CH60_RS12240 PF01266 FAD dependent oxidoreductase CH60_RS12245 PF00196 Bacterial regulatory proteins, luxR family CH60_RS12250 PF01594 AI-2E family transporter CH60_RS12255 PF00581 Rhodanese-like domain CH60_RS12255 PF12368 Rhodanase C-terminal CH60_RS12255 PF17773 UPF0176 acylphosphatase like domain CH60_RS12280 PF00765 Autoinducer synthase CH60_RS12285 PF00196 Bacterial regulatory proteins, luxR family CH60_RS12285 PF03472 Autoinducer binding domain CH60_RS12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS12290 PF03466 LysR substrate binding domain CH60_RS12300 PF00083 Sugar (and other) transporter CH60_RS12310 PF00248 Aldo/keto reductase family CH60_RS12315 PF09618 CRISPR-associated protein (Cas_Csy4) CH60_RS12320 PF09615 CRISPR-associated protein (Cas_Csy3) CH60_RS12325 PF09614 CRISPR-associated protein (Cas_Csy2) CH60_RS12330 PF09611 CRISPR-associated protein (Cas_Csy1) CH60_RS12340 PF01867 CRISPR associated protein Cas1 CH60_RS12350 PF00924 Mechanosensitive ion channel CH60_RS12370 PF04041 beta-1,4-mannooligosaccharide phosphorylase CH60_RS12375 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS12380 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS12390 PF00356 Bacterial regulatory proteins, lacI family CH60_RS12395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH60_RS12395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH60_RS12395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH60_RS12395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH60_RS12400 PF01797 Transposase IS200 like CH60_RS12405 PF00005 ABC transporter CH60_RS12405 PF17912 MalK OB fold domain CH60_RS12415 PF15526 Novel toxin 21 CH60_RS12415 PF05860 haemagglutination activity domain CH60_RS12415 PF05594 Haemagluttinin repeat CH60_RS12415 PF13332 Hemagglutinin repeat CH60_RS12415 PF04829 Pre-toxin domain with VENN motif CH60_RS12435 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS12435 PF05860 haemagglutination activity domain CH60_RS12435 PF04829 Pre-toxin domain with VENN motif CH60_RS12435 PF13332 Hemagglutinin repeat CH60_RS12440 PF08479 POTRA domain, ShlB-type CH60_RS12440 PF17287 POTRA domain CH60_RS12440 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH60_RS12445 PF00111 2Fe-2S iron-sulfur cluster binding domain CH60_RS12445 PF00175 Oxidoreductase NAD-binding domain CH60_RS12445 PF00970 Oxidoreductase FAD-binding domain CH60_RS12450 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CH60_RS12450 PF00355 Rieske [2Fe-2S] domain CH60_RS12455 PF02028 BCCT, betaine/carnitine/choline family transporter CH60_RS12465 PF00180 Isocitrate/isopropylmalate dehydrogenase CH60_RS12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS12470 PF03466 LysR substrate binding domain CH60_RS12475 PF00356 Bacterial regulatory proteins, lacI family CH60_RS12480 PF02653 Branched-chain amino acid transport system / permease component CH60_RS12485 PF00005 ABC transporter CH60_RS12490 PF13407 Periplasmic binding protein domain CH60_RS12495 PF08240 Alcohol dehydrogenase GroES-like domain CH60_RS12495 PF00107 Zinc-binding dehydrogenase CH60_RS12515 PF13505 Outer membrane protein beta-barrel domain CH60_RS12520 PF00892 EamA-like transporter family CH60_RS12530 PF13649 Methyltransferase domain CH60_RS12535 PF00210 Ferritin-like domain CH60_RS12545 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS12550 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS12555 PF00005 ABC transporter CH60_RS12560 PF13426 PAS domain CH60_RS12560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH60_RS12560 PF08447 PAS fold CH60_RS12565 PF05971 RNA methyltransferase CH60_RS12570 PF07338 Protein of unknown function (DUF1471) CH60_RS12575 PF02885 Glycosyl transferase family, helical bundle domain CH60_RS12580 PF00501 AMP-binding enzyme CH60_RS12580 PF13193 AMP-binding enzyme C-terminal domain CH60_RS12585 PF13378 Enolase C-terminal domain-like CH60_RS12590 PF00378 Enoyl-CoA hydratase/isomerase CH60_RS12595 PF12697 Alpha/beta hydrolase family CH60_RS12600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH60_RS12600 PF16582 Middle domain of thiamine pyrophosphate CH60_RS12600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH60_RS12605 PF00425 chorismate binding enzyme CH60_RS12615 PF05957 Bacterial protein of unknown function (DUF883) CH60_RS12630 PF00920 Dehydratase family CH60_RS12640 PF07690 Major Facilitator Superfamily CH60_RS12645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH60_RS12645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH60_RS12655 PF00356 Bacterial regulatory proteins, lacI family CH60_RS12660 PF02638 Glycosyl hydrolase-like 10 CH60_RS12665 PF00106 short chain dehydrogenase CH60_RS12670 PF01202 Shikimate kinase CH60_RS12675 PF04074 YhcH/YjgK/YiaL CH60_RS12685 PF00361 Proton-conducting membrane transporter CH60_RS12690 PF00361 Proton-conducting membrane transporter CH60_RS12695 PF00361 Proton-conducting membrane transporter CH60_RS12695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CH60_RS12700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CH60_RS12705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CH60_RS12710 PF12838 4Fe-4S dicluster domain CH60_RS12715 PF00146 NADH dehydrogenase CH60_RS12720 PF00384 Molybdopterin oxidoreductase CH60_RS12720 PF01568 Molydopterin dinucleotide binding domain CH60_RS12720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH60_RS12720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH60_RS12725 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH60_RS12725 PF10531 SLBB domain CH60_RS12725 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH60_RS12735 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CH60_RS12735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CH60_RS12740 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CH60_RS12745 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CH60_RS12750 PF03466 LysR substrate binding domain CH60_RS12750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS12760 PF00155 Aminotransferase class I and II CH60_RS12775 PF02080 TrkA-C domain CH60_RS12775 PF03600 Citrate transporter CH60_RS12780 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS12785 PF03887 YfbU domain CH60_RS12790 PF04217 Protein of unknown function, DUF412 CH60_RS12800 PF00871 Acetokinase family CH60_RS12805 PF01515 Phosphate acetyl/butaryl transferase CH60_RS12805 PF07085 DRTGG domain CH60_RS12810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH60_RS12810 PF00356 Bacterial regulatory proteins, lacI family CH60_RS12815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH60_RS12825 PF00872 Transposase, Mutator family CH60_RS12830 PF03611 PTS system sugar-specific permease component CH60_RS12845 PF00293 NUDIX domain CH60_RS12850 PF12850 Calcineurin-like phosphoesterase superfamily domain CH60_RS12860 PF01370 NAD dependent epimerase/dehydratase family CH60_RS12860 PF08338 Domain of unknown function (DUF1731) CH60_RS12865 PF00005 ABC transporter CH60_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS12875 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS12880 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS12885 PF02441 Flavoprotein CH60_RS12890 PF00156 Phosphoribosyl transferase domain CH60_RS12895 PF02674 Colicin V production protein CH60_RS12900 PF05036 Sporulation related domain CH60_RS12905 PF02875 Mur ligase family, glutamate ligase domain CH60_RS12905 PF08245 Mur ligase middle domain CH60_RS12910 PF01039 Carboxyl transferase domain CH60_RS12910 PF17848 Acetyl-coA carboxylase zinc finger domain CH60_RS12915 PF09335 SNARE associated Golgi protein CH60_RS12920 PF01416 tRNA pseudouridine synthase CH60_RS12925 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH60_RS12925 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH60_RS12930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH60_RS12930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH60_RS12930 PF11890 Domain of unknown function (DUF3410) CH60_RS12945 PF00892 EamA-like transporter family CH60_RS12955 PF00419 Fimbrial protein CH60_RS12960 PF01177 Asp/Glu/Hydantoin racemase CH60_RS12965 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS12965 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS12970 PF01266 FAD dependent oxidoreductase CH60_RS12970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CH60_RS12975 PF08891 YfcL protein CH60_RS12980 PF04315 Elongation factor P hydroxylase CH60_RS12985 PF01925 Sulfite exporter TauE/SafE CH60_RS12990 PF03411 Penicillin-insensitive murein endopeptidase CH60_RS12995 PF01264 Chorismate synthase CH60_RS13000 PF05175 Methyltransferase small domain CH60_RS13005 PF01713 Smr domain CH60_RS13010 PF00300 Histidine phosphatase superfamily (branch 1) CH60_RS13015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH60_RS13015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH60_RS13015 PF00378 Enoyl-CoA hydratase/isomerase CH60_RS13020 PF02803 Thiolase, C-terminal domain CH60_RS13020 PF00108 Thiolase, N-terminal domain CH60_RS13025 PF04175 Protein of unknown function (DUF406) CH60_RS13030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CH60_RS13035 PF04333 MlaA lipoprotein CH60_RS13040 PF03918 Cytochrome C biogenesis protein CH60_RS13045 PF03918 Cytochrome C biogenesis protein CH60_RS13050 PF08534 Redoxin CH60_RS13055 PF01578 Cytochrome C assembly protein CH60_RS13055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CH60_RS13060 PF03100 CcmE CH60_RS13065 PF04995 Heme exporter protein D (CcmD) CH60_RS13070 PF01578 Cytochrome C assembly protein CH60_RS13075 PF03379 CcmB protein CH60_RS13080 PF00005 ABC transporter CH60_RS13095 PF04011 LemA family CH60_RS13105 PF03831 PhnA domain CH60_RS13105 PF08274 PhnA Zinc-Ribbon CH60_RS13115 PF00872 Transposase, Mutator family CH60_RS13120 PF07883 Cupin domain CH60_RS13125 PF04962 KduI/IolB family CH60_RS13135 PF06917 Periplasmic pectate lyase CH60_RS13140 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS13150 PF03459 TOBE domain CH60_RS13150 PF00005 ABC transporter CH60_RS13150 PF17912 MalK OB fold domain CH60_RS13155 PF01547 Bacterial extracellular solute-binding protein CH60_RS13160 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH60_RS13165 PF04307 LexA-binding, inner membrane-associated putative hydrolase CH60_RS13170 PF00375 Sodium:dicarboxylate symporter family CH60_RS13175 PF01510 N-acetylmuramoyl-L-alanine amidase CH60_RS13180 PF09339 IclR helix-turn-helix domain CH60_RS13180 PF01614 Bacterial transcriptional regulator CH60_RS13185 PF14583 Oligogalacturonate lyase CH60_RS13190 PF07690 Major Facilitator Superfamily CH60_RS13195 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS13195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS13205 PF13953 PapC C-terminal domain CH60_RS13205 PF00577 Outer membrane usher protein CH60_RS13205 PF13954 PapC N-terminal domain CH60_RS13210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS13210 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS13215 PF00419 Fimbrial protein CH60_RS13220 PF01435 Peptidase family M48 CH60_RS13225 PF11818 C-terminal domain of tail specific protease (DUF3340) CH60_RS13225 PF00595 PDZ domain CH60_RS13225 PF03572 Peptidase family S41 CH60_RS13225 PF17804 Tail specific protease N-terminal domain CH60_RS13230 PF17516 ProQ C-terminal domain CH60_RS13230 PF04352 ProQ/FINO family CH60_RS13235 PF13185 GAF domain CH60_RS13240 PF04403 Paraquat-inducible protein A CH60_RS13245 PF02470 MlaD protein CH60_RS13265 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS13265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS13280 PF07351 Protein of unknown function (DUF1480) CH60_RS13300 PF07702 UTRA domain CH60_RS13300 PF00392 Bacterial regulatory proteins, gntR family CH60_RS13305 PF01979 Amidohydrolase family CH60_RS13315 PF00267 Gram-negative porin CH60_RS13320 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CH60_RS13325 PF04996 Succinylarginine dihydrolase CH60_RS13330 PF00171 Aldehyde dehydrogenase family CH60_RS13335 PF04958 Arginine N-succinyltransferase beta subunit CH60_RS13340 PF00202 Aminotransferase class-III CH60_RS13350 PF00392 Bacterial regulatory proteins, gntR family CH60_RS13350 PF00155 Aminotransferase class I and II CH60_RS13355 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CH60_RS13355 PF07730 Histidine kinase CH60_RS13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS13355 PF00672 HAMP domain CH60_RS13360 PF01699 Sodium/calcium exchanger protein CH60_RS13365 PF02562 PhoH-like protein CH60_RS13380 PF13994 PgaD-like protein CH60_RS13385 PF00535 Glycosyl transferase family 2 CH60_RS13390 PF01522 Polysaccharide deacetylase CH60_RS13390 PF14883 Hypothetical glycosyl hydrolase family 13 CH60_RS13400 PF00557 Metallopeptidase family M24 CH60_RS13405 PF09313 Domain of unknown function (DUF1971) CH60_RS13405 PF03848 Tellurite resistance protein TehB CH60_RS13415 PF00578 AhpC/TSA family CH60_RS13420 PF00005 ABC transporter CH60_RS13420 PF02687 FtsX-like permease family CH60_RS13420 PF12704 MacB-like periplasmic core domain CH60_RS13430 PF12704 MacB-like periplasmic core domain CH60_RS13430 PF00005 ABC transporter CH60_RS13430 PF02687 FtsX-like permease family CH60_RS13440 PF10634 Fe2+ transport protein CH60_RS13445 PF03239 Iron permease FTR1 family CH60_RS13455 PF04960 Glutaminase CH60_RS13460 PF08220 DeoR-like helix-turn-helix domain CH60_RS13460 PF00455 DeoR C terminal sensor domain CH60_RS13465 PF00324 Amino acid permease CH60_RS13470 PF00155 Aminotransferase class I and II CH60_RS13475 PF02508 Rnf-Nqr subunit, membrane protein CH60_RS13485 PF04909 Amidohydrolase CH60_RS13490 PF07690 Major Facilitator Superfamily CH60_RS13505 PF03466 LysR substrate binding domain CH60_RS13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS13510 PF03328 HpcH/HpaI aldolase/citrate lyase family CH60_RS13515 PF01575 MaoC like domain CH60_RS13520 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CH60_RS13520 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CH60_RS13525 PF00196 Bacterial regulatory proteins, luxR family CH60_RS13525 PF00072 Response regulator receiver domain CH60_RS13540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS13540 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS13545 PF00577 Outer membrane usher protein CH60_RS13545 PF13953 PapC C-terminal domain CH60_RS13545 PF13954 PapC N-terminal domain CH60_RS13555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS13555 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS13565 PF00589 Phage integrase family CH60_RS13565 PF13356 Arm DNA-binding domain CH60_RS13570 PF00425 chorismate binding enzyme CH60_RS13575 PF07690 Major Facilitator Superfamily CH60_RS13580 PF00664 ABC transporter transmembrane region CH60_RS13580 PF00005 ABC transporter CH60_RS13585 PF04954 Siderophore-interacting protein CH60_RS13585 PF08021 Siderophore-interacting FAD-binding domain CH60_RS13585 PF00005 ABC transporter CH60_RS13585 PF00664 ABC transporter transmembrane region CH60_RS13595 PF00550 Phosphopantetheine attachment site CH60_RS13595 PF00668 Condensation domain CH60_RS13595 PF00501 AMP-binding enzyme CH60_RS13595 PF08242 Methyltransferase domain CH60_RS13600 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS13600 PF00550 Phosphopantetheine attachment site CH60_RS13600 PF00698 Acyl transferase domain CH60_RS13600 PF00668 Condensation domain CH60_RS13600 PF16197 Ketoacyl-synthetase C-terminal extension CH60_RS13600 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS13610 PF00975 Thioesterase domain CH60_RS13615 PF00501 AMP-binding enzyme CH60_RS13615 PF13193 AMP-binding enzyme C-terminal domain CH60_RS13620 PF07715 TonB-dependent Receptor Plug Domain CH60_RS13620 PF00593 TonB dependent receptor CH60_RS13660 PF01695 IstB-like ATP binding protein CH60_RS13665 PF01695 IstB-like ATP binding protein CH60_RS13680 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS13680 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS13690 PF07977 FabA-like domain CH60_RS13695 PF05362 Lon protease (S16) C-terminal proteolytic domain CH60_RS13695 PF13654 AAA domain CH60_RS13700 PF06303 MatP N-terminal domain CH60_RS13700 PF17414 MatP C-terminal ribbon-helix-helix domain CH60_RS13705 PF01797 Transposase IS200 like CH60_RS13710 PF04245 37-kD nucleoid-associated bacterial protein CH60_RS13715 PF07208 Protein of unknown function (DUF1414) CH60_RS13720 PF11893 Domain of unknown function (DUF3413) CH60_RS13720 PF00884 Sulfatase CH60_RS13735 PF05638 Type VI secretion system effector, Hcp CH60_RS13760 PF01548 Transposase CH60_RS13760 PF02371 Transposase IS116/IS110/IS902 family CH60_RS13765 PF00271 Helicase conserved C-terminal domain CH60_RS13765 PF00270 DEAD/DEAH box helicase CH60_RS13785 PF01207 Dihydrouridine synthase (Dus) CH60_RS13795 PF00768 D-alanyl-D-alanine carboxypeptidase CH60_RS13800 PF09330 D-lactate dehydrogenase, membrane binding CH60_RS13800 PF01565 FAD binding domain CH60_RS13805 PF01928 CYTH domain CH60_RS13810 PF01844 HNH endonuclease CH60_RS13820 PF04226 Transglycosylase associated protein CH60_RS13825 PF00005 ABC transporter CH60_RS13835 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS13840 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS13845 PF07308 Protein of unknown function (DUF1456) CH60_RS13850 PF00158 Sigma-54 interaction domain CH60_RS13850 PF13188 PAS domain CH60_RS13850 PF02954 Bacterial regulatory protein, Fis family CH60_RS13855 PF02653 Branched-chain amino acid transport system / permease component CH60_RS13860 PF02653 Branched-chain amino acid transport system / permease component CH60_RS13865 PF00005 ABC transporter CH60_RS13870 PF00005 ABC transporter CH60_RS13885 PF00581 Rhodanese-like domain CH60_RS13890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH60_RS13895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH60_RS13900 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS13905 PF00005 ABC transporter CH60_RS13910 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS13915 PF13520 Amino acid permease CH60_RS13920 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH60_RS13920 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH60_RS13920 PF01276 Orn/Lys/Arg decarboxylase, major domain CH60_RS13930 PF00892 EamA-like transporter family CH60_RS13935 PF00267 Gram-negative porin CH60_RS13940 PF13307 Helicase C-terminal domain CH60_RS13940 PF06733 DEAD_2 CH60_RS13945 PF00199 Catalase CH60_RS13945 PF06628 Catalase-related immune-responsive CH60_RS13950 PF07437 YfaZ precursor CH60_RS13955 PF03222 Tryptophan/tyrosine permease family CH60_RS13960 PF00994 Probable molybdopterin binding domain CH60_RS13965 PF03974 Ecotin CH60_RS13970 PF00111 2Fe-2S iron-sulfur cluster binding domain CH60_RS13975 PF00268 Ribonucleotide reductase, small chain CH60_RS13980 PF03477 ATP cone domain CH60_RS13980 PF02867 Ribonucleotide reductase, barrel domain CH60_RS13980 PF00317 Ribonucleotide reductase, all-alpha domain CH60_RS13990 PF03989 DNA gyrase C-terminal domain, beta-propeller CH60_RS13990 PF00521 DNA gyrase/topoisomerase IV, subunit A CH60_RS14000 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS14000 PF09456 RcsC Alpha-Beta-Loop (ABL) CH60_RS14000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS14000 PF00072 Response regulator receiver domain CH60_RS14005 PF00072 Response regulator receiver domain CH60_RS14005 PF00196 Bacterial regulatory proteins, luxR family CH60_RS14010 PF01627 Hpt domain CH60_RS14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS14010 PF16359 RcsD-ABL domain CH60_RS14015 PF16359 RcsD-ABL domain CH60_RS14015 PF01627 Hpt domain CH60_RS14015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS14020 PF07690 Major Facilitator Superfamily CH60_RS14030 PF00267 Gram-negative porin CH60_RS14045 PF00144 Beta-lactamase CH60_RS14060 PF12706 Beta-lactamase superfamily domain CH60_RS14065 PF00672 HAMP domain CH60_RS14065 PF02743 Cache domain CH60_RS14065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH60_RS14070 PF01278 Omptin family CH60_RS14075 PF06183 DinI-like family CH60_RS14080 PF01381 Helix-turn-helix CH60_RS14080 PF00717 Peptidase S24-like CH60_RS14085 PF06530 Phage antitermination protein Q CH60_RS14090 PF07005 Sugar-binding N-terminal domain CH60_RS14090 PF17042 Nucleotide-binding C-terminal domain CH60_RS14100 PF00455 DeoR C terminal sensor domain CH60_RS14100 PF08220 DeoR-like helix-turn-helix domain CH60_RS14105 PF01261 Xylose isomerase-like TIM barrel CH60_RS14125 PF17482 Phage tail sheath C-terminal domain CH60_RS14125 PF04984 Phage tail sheath protein subtilisin-like domain CH60_RS14165 PF04865 Baseplate J-like protein CH60_RS14180 PF07484 Phage Tail Collar Domain CH60_RS14185 PF01418 Helix-turn-helix domain, rpiR family CH60_RS14185 PF01380 SIS domain CH60_RS14190 PF00232 Glycosyl hydrolase family 1 CH60_RS14195 PF00872 Transposase, Mutator family CH60_RS14220 PF13592 Winged helix-turn helix CH60_RS14220 PF13358 DDE superfamily endonuclease CH60_RS14225 PF00271 Helicase conserved C-terminal domain CH60_RS14225 PF00270 DEAD/DEAH box helicase CH60_RS14230 PF09209 Tetracyclin repressor-like, C-terminal domain CH60_RS14230 PF00440 Bacterial regulatory proteins, tetR family CH60_RS14235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS14240 PF00005 ABC transporter CH60_RS14265 PF03466 LysR substrate binding domain CH60_RS14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS14270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH60_RS14275 PF00158 Sigma-54 interaction domain CH60_RS14275 PF00072 Response regulator receiver domain CH60_RS14275 PF02954 Bacterial regulatory protein, Fis family CH60_RS14280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS14280 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS14285 PF13801 Heavy-metal resistance CH60_RS14290 PF03825 Nucleoside H+ symporter CH60_RS14300 PF03825 Nucleoside H+ symporter CH60_RS14305 PF01048 Phosphorylase superfamily CH60_RS14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS14315 PF03466 LysR substrate binding domain CH60_RS14320 PF02028 BCCT, betaine/carnitine/choline family transporter CH60_RS14325 PF13977 BetI-type transcriptional repressor, C-terminal CH60_RS14325 PF00440 Bacterial regulatory proteins, tetR family CH60_RS14330 PF00171 Aldehyde dehydrogenase family CH60_RS14335 PF05199 GMC oxidoreductase CH60_RS14335 PF00732 GMC oxidoreductase CH60_RS14340 PF01797 Transposase IS200 like CH60_RS14350 PF01027 Inhibitor of apoptosis-promoting Bax1 CH60_RS14355 PF02391 MoaE protein CH60_RS14360 PF02597 ThiS family CH60_RS14365 PF01967 MoaC family CH60_RS14370 PF04055 Radical SAM superfamily CH60_RS14370 PF06463 Molybdenum Cofactor Synthesis C CH60_RS14380 PF01933 Uncharacterised protein family UPF0052 CH60_RS14400 PF00665 Integrase core domain CH60_RS14400 PF02796 Helix-turn-helix domain of resolvase CH60_RS14405 PF01933 Uncharacterised protein family UPF0052 CH60_RS14410 PF09905 DNA-binding protein VF530 CH60_RS14415 PF00271 Helicase conserved C-terminal domain CH60_RS14415 PF17757 UvrB interaction domain CH60_RS14415 PF12344 Ultra-violet resistance protein B CH60_RS14415 PF02151 UvrB/uvrC motif CH60_RS14415 PF04851 Type III restriction enzyme, res subunit CH60_RS14420 PF09383 NIL domain CH60_RS14420 PF00005 ABC transporter CH60_RS14430 PF08241 Methyltransferase domain CH60_RS14435 PF00155 Aminotransferase class I and II CH60_RS14440 PF04055 Radical SAM superfamily CH60_RS14440 PF06968 Biotin and Thiamin Synthesis associated domain CH60_RS14445 PF00202 Aminotransferase class-III CH60_RS14450 PF10282 Lactonase, 7-bladed beta-propeller CH60_RS14460 PF00005 ABC transporter CH60_RS14460 PF03459 TOBE domain CH60_RS14465 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS14475 PF10766 Multidrug efflux pump-associated protein AcrZ CH60_RS14480 PF03459 TOBE domain CH60_RS14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS14485 PF00005 ABC transporter CH60_RS14500 PF16363 GDP-mannose 4,6 dehydratase CH60_RS14505 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CH60_RS14505 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CH60_RS14510 PF00288 GHMP kinases N terminal domain CH60_RS14510 PF10509 Galactokinase galactose-binding signature CH60_RS14510 PF08544 GHMP kinases C terminal CH60_RS14520 PF01263 Aldose 1-epimerase CH60_RS14530 PF00300 Histidine phosphatase superfamily (branch 1) CH60_RS14535 PF00793 DAHP synthetase I family CH60_RS14540 PF01545 Cation efflux family CH60_RS14545 PF04973 Nicotinamide mononucleotide transporter CH60_RS14550 PF02445 Quinolinate synthetase A protein CH60_RS14570 PF13174 Tetratricopeptide repeat CH60_RS14570 PF16331 TolA binding protein trimerisation CH60_RS14575 PF00691 OmpA family CH60_RS14580 PF04052 TolB amino-terminal domain CH60_RS14580 PF07676 WD40-like Beta Propeller Repeat CH60_RS14585 PF06519 TolA C-terminal CH60_RS14585 PF06519 TolA C-terminal CH60_RS14590 PF02472 Biopolymer transport protein ExbD/TolR CH60_RS14595 PF01618 MotA/TolQ/ExbB proton channel family CH60_RS14600 PF03061 Thioesterase superfamily CH60_RS14605 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CH60_RS14610 PF08173 Membrane bound YbgT-like protein CH60_RS14615 PF02322 Cytochrome bd terminal oxidase subunit II CH60_RS14620 PF01654 Cytochrome bd terminal oxidase subunit I CH60_RS14625 PF01797 Transposase IS200 like CH60_RS14630 PF00549 CoA-ligase CH60_RS14630 PF02629 CoA binding domain CH60_RS14635 PF00549 CoA-ligase CH60_RS14635 PF08442 ATP-grasp domain CH60_RS14640 PF02817 e3 binding domain CH60_RS14640 PF00364 Biotin-requiring enzyme CH60_RS14640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH60_RS14645 PF02779 Transketolase, pyrimidine binding domain CH60_RS14645 PF16870 2-oxoglutarate dehydrogenase C-terminal CH60_RS14645 PF00676 Dehydrogenase E1 component CH60_RS14645 PF16078 2-oxoglutarate dehydrogenase N-terminus CH60_RS14650 PF13085 2Fe-2S iron-sulfur cluster binding domain CH60_RS14655 PF00890 FAD binding domain CH60_RS14655 PF02910 Fumarate reductase flavoprotein C-term CH60_RS14660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH60_RS14665 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH60_RS14670 PF00285 Citrate synthase, C-terminal domain CH60_RS14675 PF01025 GrpE CH60_RS14680 PF01513 ATP-NAD kinase CH60_RS14685 PF02463 RecF/RecN/SMC N terminal domain CH60_RS14690 PF04355 SmpA / OmlA family CH60_RS14695 PF03658 RnfH family Ubiquitin CH60_RS14700 PF03364 Polyketide cyclase / dehydrase and lipid transport CH60_RS14705 PF01668 SmpB protein CH60_RS14720 PF00589 Phage integrase family CH60_RS14720 PF13356 Arm DNA-binding domain CH60_RS14780 PF05973 Phage derived protein Gp49-like (DUF891) CH60_RS14790 PF02796 Helix-turn-helix domain of resolvase CH60_RS14790 PF00665 Integrase core domain CH60_RS14795 PF01695 IstB-like ATP binding protein CH60_RS14800 PF13426 PAS domain CH60_RS14800 PF08448 PAS fold CH60_RS14800 PF08447 PAS fold CH60_RS14800 PF05231 MASE1 CH60_RS14800 PF00990 Diguanylate cyclase, GGDEF domain CH60_RS14800 PF00563 EAL domain CH60_RS14810 PF13847 Methyltransferase domain CH60_RS14815 PF02578 Multi-copper polyphenol oxidoreductase laccase CH60_RS14820 PF00313 'Cold-shock' DNA-binding domain CH60_RS14825 PF10736 Protein of unknown function (DUF2627) CH60_RS14835 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CH60_RS14840 PF00324 Amino acid permease CH60_RS14855 PF13974 YebO-like protein CH60_RS14860 PF13996 YobH-like protein CH60_RS14865 PF10964 Protein of unknown function (DUF2766) CH60_RS14875 PF12833 Helix-turn-helix domain CH60_RS14885 PF00005 ABC transporter CH60_RS14885 PF00664 ABC transporter transmembrane region CH60_RS14900 PF06167 Glucose-regulated metallo-peptidase M90 CH60_RS14910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH60_RS14910 PF00356 Bacterial regulatory proteins, lacI family CH60_RS14915 PF01306 LacY proton/sugar symporter CH60_RS14920 PF16875 Glycosyl hydrolase family 36 N-terminal domain CH60_RS14920 PF16874 Glycosyl hydrolase family 36 C-terminal domain CH60_RS14930 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CH60_RS14930 PF01648 4'-phosphopantetheinyl transferase superfamily CH60_RS14935 PF03480 Bacterial extracellular solute-binding protein, family 7 CH60_RS14945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CH60_RS14950 PF00196 Bacterial regulatory proteins, luxR family CH60_RS14950 PF00072 Response regulator receiver domain CH60_RS14960 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CH60_RS14970 PF01522 Polysaccharide deacetylase CH60_RS14980 PF01554 MatE CH60_RS14985 PF00764 Arginosuccinate synthase CH60_RS14990 PF01070 FMN-dependent dehydrogenase CH60_RS14995 PF13378 Enolase C-terminal domain-like CH60_RS14995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH60_RS15000 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH60_RS15010 PF04134 Protein of unknown function, DUF393 CH60_RS15015 PF07690 Major Facilitator Superfamily CH60_RS15020 PF11924 Inverse autotransporter, beta-domain CH60_RS15020 PF02369 Bacterial Ig-like domain (group 1) CH60_RS15020 PF09134 Invasin, domain 3 CH60_RS15025 PF04363 Protein of unknown function (DUF496) CH60_RS15035 PF08411 Exonuclease C-terminal CH60_RS15035 PF00929 Exonuclease CH60_RS15040 PF13520 Amino acid permease CH60_RS15050 PF00465 Iron-containing alcohol dehydrogenase CH60_RS15055 PF00005 ABC transporter CH60_RS15060 PF00005 ABC transporter CH60_RS15075 PF01370 NAD dependent epimerase/dehydratase family CH60_RS15080 PF01634 ATP phosphoribosyltransferase CH60_RS15080 PF08029 HisG, C-terminal domain CH60_RS15085 PF00815 Histidinol dehydrogenase CH60_RS15090 PF00155 Aminotransferase class I and II CH60_RS15095 PF00475 Imidazoleglycerol-phosphate dehydratase CH60_RS15100 PF00117 Glutamine amidotransferase class-I CH60_RS15105 PF00977 Histidine biosynthesis protein CH60_RS15110 PF00977 Histidine biosynthesis protein CH60_RS15115 PF01502 Phosphoribosyl-AMP cyclohydrolase CH60_RS15115 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CH60_RS15120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH60_RS15120 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CH60_RS15125 PF00483 Nucleotidyl transferase CH60_RS15130 PF00483 Nucleotidyl transferase CH60_RS15135 PF04183 IucA / IucC family CH60_RS15135 PF06276 Ferric iron reductase FhuF-like transporter CH60_RS15140 PF00593 TonB dependent receptor CH60_RS15140 PF07715 TonB-dependent Receptor Plug Domain CH60_RS15140 PF07660 Secretin and TonB N terminus short domain CH60_RS15145 PF01497 Periplasmic binding protein CH60_RS15150 PF01032 FecCD transport family CH60_RS15155 PF01032 FecCD transport family CH60_RS15160 PF00005 ABC transporter CH60_RS15165 PF04183 IucA / IucC family CH60_RS15165 PF06276 Ferric iron reductase FhuF-like transporter CH60_RS15175 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CH60_RS15180 PF00282 Pyridoxal-dependent decarboxylase conserved domain CH60_RS15185 PF06276 Ferric iron reductase FhuF-like transporter CH60_RS15185 PF11575 FhuF 2Fe-2S C-terminal domain CH60_RS15190 PF03741 Integral membrane protein TerC family CH60_RS15190 PF00571 CBS domain CH60_RS15190 PF03471 Transporter associated domain CH60_RS15195 PF05170 AsmA family CH60_RS15200 PF00692 dUTPase CH60_RS15205 PF00485 Phosphoribulokinase / Uridine kinase family CH60_RS15210 PF10609 NUBPL iron-transfer P-loop NTPase CH60_RS15215 PF01588 Putative tRNA binding domain CH60_RS15215 PF09334 tRNA synthetases class I (M) CH60_RS15220 PF01797 Transposase IS200 like CH60_RS15245 PF07690 Major Facilitator Superfamily CH60_RS15250 PF03788 LrgA family CH60_RS15255 PF04172 LrgB-like family CH60_RS15260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH60_RS15260 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CH60_RS15265 PF00390 Malic enzyme, N-terminal domain CH60_RS15265 PF03949 Malic enzyme, NAD binding domain CH60_RS15270 PF02698 DUF218 domain CH60_RS15275 PF02653 Branched-chain amino acid transport system / permease component CH60_RS15280 PF00005 ABC transporter CH60_RS15285 PF13407 Periplasmic binding protein domain CH60_RS15290 PF04235 Protein of unknown function (DUF418) CH60_RS15295 PF01227 GTP cyclohydrolase I CH60_RS15300 PF06779 Uncharacterised MFS-type transporter YbfB CH60_RS15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS15305 PF03466 LysR substrate binding domain CH60_RS15310 PF08240 Alcohol dehydrogenase GroES-like domain CH60_RS15310 PF00107 Zinc-binding dehydrogenase CH60_RS15315 PF00756 Putative esterase CH60_RS15330 PF13533 Biotin-lipoyl like CH60_RS15335 PF00005 ABC transporter CH60_RS15345 PF03454 MoeA C-terminal region (domain IV) CH60_RS15345 PF03453 MoeA N-terminal region (domain I and II) CH60_RS15345 PF00994 Probable molybdopterin binding domain CH60_RS15350 PF00899 ThiF family CH60_RS15355 PF00872 Transposase, Mutator family CH60_RS15365 PF00005 ABC transporter CH60_RS15365 PF12848 ABC transporter CH60_RS15425 PF13358 DDE superfamily endonuclease CH60_RS15425 PF13592 Winged helix-turn helix CH60_RS15455 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CH60_RS15455 PF04717 Type VI secretion system, phage-baseplate injector CH60_RS15455 PF13296 Putative type VI secretion system Rhs element Vgr CH60_RS15460 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS15460 PF17871 AAA lid domain CH60_RS15460 PF07724 AAA domain (Cdc48 subfamily) CH60_RS15460 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS15485 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH60_RS15500 PF00698 Acyl transferase domain CH60_RS15505 PF00550 Phosphopantetheine attachment site CH60_RS15520 PF00378 Enoyl-CoA hydratase/isomerase CH60_RS15530 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CH60_RS15530 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CH60_RS15540 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS15540 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS15545 PF07977 FabA-like domain CH60_RS15560 PF08031 Berberine and berberine like CH60_RS15560 PF01565 FAD binding domain CH60_RS15580 PF13610 DDE domain CH60_RS15590 PF04358 DsrC like protein CH60_RS15595 PF00708 Acylphosphatase CH60_RS15600 PF17785 PUA-like domain CH60_RS15600 PF10672 S-adenosylmethionine-dependent methyltransferase CH60_RS15605 PF08755 Hemimethylated DNA-binding protein YccV like CH60_RS15610 PF13380 CoA binding domain CH60_RS15615 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CH60_RS15620 PF02142 MGS-like domain CH60_RS15625 PF00580 UvrD/REP helicase N-terminal domain CH60_RS15625 PF12462 DNA helicase IV / RNA helicase N terminal CH60_RS15625 PF13361 UvrD-like helicase C-terminal domain CH60_RS15630 PF03733 Inner membrane component domain CH60_RS15635 PF12805 FUSC-like inner membrane protein yccS CH60_RS15640 PF04993 TfoX N-terminal domain CH60_RS15640 PF04994 TfoX C-terminal domain CH60_RS15645 PF03846 Cell division inhibitor SulA CH60_RS15650 PF01389 OmpA-like transmembrane domain CH60_RS15650 PF00691 OmpA family CH60_RS15660 PF01797 Transposase IS200 like CH60_RS15665 PF01386 Ribosomal L25p family CH60_RS15670 PF04851 Type III restriction enzyme, res subunit CH60_RS15670 PF00271 Helicase conserved C-terminal domain CH60_RS15675 PF00849 RNA pseudouridylate synthase CH60_RS15675 PF01479 S4 domain CH60_RS15680 PF07690 Major Facilitator Superfamily CH60_RS15685 PF13989 YejG-like protein CH60_RS15690 PF00005 ABC transporter CH60_RS15690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH60_RS15695 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS15695 PF12911 N-terminal TM domain of oligopeptide transport permease C CH60_RS15700 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS15705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS15710 PF12792 CSS motif domain associated with EAL CH60_RS15710 PF00563 EAL domain CH60_RS15715 PF00877 NlpC/P60 family CH60_RS15720 PF01569 PAP2 superfamily CH60_RS15725 PF07683 Cobalamin synthesis protein cobW C-terminal domain CH60_RS15725 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH60_RS15735 PF07729 FCD domain CH60_RS15735 PF00392 Bacterial regulatory proteins, gntR family CH60_RS15740 PF01232 Mannitol dehydrogenase Rossmann domain CH60_RS15740 PF08125 Mannitol dehydrogenase C-terminal domain CH60_RS15745 PF03786 D-mannonate dehydratase (UxuA) CH60_RS15750 PF08207 Elongation factor P (EF-P) KOW-like domain CH60_RS15750 PF01132 Elongation factor P (EF-P) OB domain CH60_RS15750 PF09285 Elongation factor P, C-terminal CH60_RS15755 PF03222 Tryptophan/tyrosine permease family CH60_RS15760 PF03692 Putative zinc- or iron-chelating domain CH60_RS15770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH60_RS15770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH60_RS15770 PF01842 ACT domain CH60_RS15780 PF00171 Aldehyde dehydrogenase family CH60_RS15785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS15785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS15790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH60_RS15800 PF00005 ABC transporter CH60_RS15805 PF02653 Branched-chain amino acid transport system / permease component CH60_RS15810 PF00293 NUDIX domain CH60_RS15815 PF00381 PTS HPr component phosphorylation site CH60_RS15815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH60_RS15820 PF00294 pfkB family carbohydrate kinase CH60_RS15825 PF02378 Phosphotransferase system, EIIC CH60_RS15825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH60_RS15830 PF00486 Transcriptional regulatory protein, C terminal CH60_RS15835 PF17550 Family of unknown function CH60_RS15845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS15845 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS15850 PF13953 PapC C-terminal domain CH60_RS15850 PF00577 Outer membrane usher protein CH60_RS15850 PF13954 PapC N-terminal domain CH60_RS15855 PF01261 Xylose isomerase-like TIM barrel CH60_RS15860 PF01695 IstB-like ATP binding protein CH60_RS15865 PF00665 Integrase core domain CH60_RS15865 PF02796 Helix-turn-helix domain of resolvase CH60_RS15870 PF13409 Glutathione S-transferase, N-terminal domain CH60_RS15875 PF07681 DoxX CH60_RS15885 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CH60_RS15890 PF05957 Bacterial protein of unknown function (DUF883) CH60_RS15905 PF13721 SecD export protein N-terminal TM region CH60_RS15910 PF09335 SNARE associated Golgi protein CH60_RS15920 PF00392 Bacterial regulatory proteins, gntR family CH60_RS15920 PF07729 FCD domain CH60_RS15925 PF07690 Major Facilitator Superfamily CH60_RS15935 PF02614 Glucuronate isomerase CH60_RS15940 PF08125 Mannitol dehydrogenase C-terminal domain CH60_RS15940 PF01232 Mannitol dehydrogenase Rossmann domain CH60_RS15945 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CH60_RS15945 PF08666 SAF domain CH60_RS15950 PF10688 Bacterial inner membrane protein CH60_RS15955 PF01797 Transposase IS200 like CH60_RS15960 PF00375 Sodium:dicarboxylate symporter family CH60_RS15965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH60_RS15970 PF01863 Protein of unknown function DUF45 CH60_RS15980 PF05175 Methyltransferase small domain CH60_RS15985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS15985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH60_RS15990 PF03729 Short repeat of unknown function (DUF308) CH60_RS16010 PF00092 von Willebrand factor type A domain CH60_RS16020 PF02342 TerD domain CH60_RS16025 PF00092 von Willebrand factor type A domain CH60_RS16030 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH60_RS16030 PF17287 POTRA domain CH60_RS16030 PF08479 POTRA domain, ShlB-type CH60_RS16035 PF05860 haemagglutination activity domain CH60_RS16035 PF13332 Hemagglutinin repeat CH60_RS16035 PF04829 Pre-toxin domain with VENN motif CH60_RS16035 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS16045 PF04829 Pre-toxin domain with VENN motif CH60_RS16045 PF13332 Hemagglutinin repeat CH60_RS16050 PF13332 Hemagglutinin repeat CH60_RS16050 PF04829 Pre-toxin domain with VENN motif CH60_RS16060 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS16060 PF05860 haemagglutination activity domain CH60_RS16060 PF13332 Hemagglutinin repeat CH60_RS16060 PF04829 Pre-toxin domain with VENN motif CH60_RS16065 PF05860 haemagglutination activity domain CH60_RS16065 PF13332 Hemagglutinin repeat CH60_RS16065 PF04829 Pre-toxin domain with VENN motif CH60_RS16065 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS16085 PF17912 MalK OB fold domain CH60_RS16085 PF03459 TOBE domain CH60_RS16085 PF00005 ABC transporter CH60_RS16090 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CH60_RS16095 PF00356 Bacterial regulatory proteins, lacI family CH60_RS16100 PF01547 Bacterial extracellular solute-binding protein CH60_RS16105 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS16110 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS16120 PF01915 Glycosyl hydrolase family 3 C-terminal domain CH60_RS16120 PF00933 Glycosyl hydrolase family 3 N terminal domain CH60_RS16120 PF14310 Fibronectin type III-like domain CH60_RS16130 PF04632 Fusaric acid resistance protein family CH60_RS16135 PF00529 HlyD membrane-fusion protein of T1SS CH60_RS16135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS16155 PF00155 Aminotransferase class I and II CH60_RS16175 PF01042 Endoribonuclease L-PSP CH60_RS16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS16195 PF03466 LysR substrate binding domain CH60_RS16245 PF00872 Transposase, Mutator family CH60_RS16265 PF04546 Sigma-70, non-essential region CH60_RS16265 PF04545 Sigma-70, region 4 CH60_RS16265 PF04539 Sigma-70 region 3 CH60_RS16265 PF04542 Sigma-70 region 2 CH60_RS16265 PF00140 Sigma-70 factor, region 1.2 CH60_RS16265 PF03979 Sigma-70 factor, region 1.1 CH60_RS16270 PF01807 CHC2 zinc finger CH60_RS16270 PF10410 DnaB-helicase binding domain of primase CH60_RS16270 PF08275 DNA primase catalytic core, N-terminal domain CH60_RS16270 PF08278 DNA primase DnaG DnaB-binding CH60_RS16275 PF01165 Ribosomal protein S21 CH60_RS16280 PF00814 Glycoprotease family CH60_RS16285 PF02660 Glycerol-3-phosphate acyltransferase CH60_RS16290 PF02152 Dihydroneopterin aldolase CH60_RS16295 PF02673 Bacitracin resistance protein BacA CH60_RS16300 PF01966 HD domain CH60_RS16300 PF01743 Poly A polymerase head domain CH60_RS16300 PF12627 Probable RNA and SrmB- binding site of polymerase A CH60_RS16305 PF08239 Bacterial SH3 domain CH60_RS16310 PF01928 CYTH domain CH60_RS16315 PF08335 GlnD PII-uridylyltransferase CH60_RS16315 PF03710 Glutamate-ammonia ligase adenylyltransferase CH60_RS16320 PF00294 pfkB family carbohydrate kinase CH60_RS16320 PF01467 Cytidylyltransferase-like CH60_RS16325 PF13520 Amino acid permease CH60_RS16330 PF04380 Membrane fusogenic activity CH60_RS16340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CH60_RS16345 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CH60_RS16350 PF03738 Glutathionylspermidine synthase preATP-grasp CH60_RS16355 PF06693 Protein of unknown function (DUF1190) CH60_RS16365 PF02321 Outer membrane efflux protein CH60_RS16370 PF00293 NUDIX domain CH60_RS16375 PF06853 Protein of unknown function (DUF1249) CH60_RS16380 PF00149 Calcineurin-like phosphoesterase CH60_RS16385 PF05728 Uncharacterised protein family (UPF0227) CH60_RS16390 PF00204 DNA gyrase B CH60_RS16390 PF00986 DNA gyrase B subunit, carboxyl terminus CH60_RS16390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS16390 PF01751 Toprim domain CH60_RS16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS16395 PF03466 LysR substrate binding domain CH60_RS16400 PF02525 Flavodoxin-like fold CH60_RS16405 PF03989 DNA gyrase C-terminal domain, beta-propeller CH60_RS16405 PF00521 DNA gyrase/topoisomerase IV, subunit A CH60_RS16410 PF01553 Acyltransferase CH60_RS16415 PF07732 Multicopper oxidase CH60_RS16415 PF07731 Multicopper oxidase CH60_RS16425 PF00248 Aldo/keto reductase family CH60_RS16435 PF00465 Iron-containing alcohol dehydrogenase CH60_RS16440 PF06719 AraC-type transcriptional regulator N-terminus CH60_RS16440 PF12833 Helix-turn-helix domain CH60_RS16445 PF09335 SNARE associated Golgi protein CH60_RS16450 PF01053 Cys/Met metabolism PLP-dependent enzyme CH60_RS16455 PF01618 MotA/TolQ/ExbB proton channel family CH60_RS16460 PF02472 Biopolymer transport protein ExbD/TolR CH60_RS16495 PF00437 Type II/IV secretion system protein CH60_RS16510 PF00263 Bacterial type II and III secretion system protein CH60_RS16510 PF13629 Pilus formation protein N terminal region CH60_RS16510 PF04972 BON domain CH60_RS16515 PF13629 Pilus formation protein N terminal region CH60_RS16515 PF00263 Bacterial type II and III secretion system protein CH60_RS16515 PF04972 BON domain CH60_RS16535 PF13954 PapC N-terminal domain CH60_RS16535 PF13953 PapC C-terminal domain CH60_RS16535 PF00577 Outer membrane usher protein CH60_RS16540 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS16540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS16545 PF00419 Fimbrial protein CH60_RS16545 PF09222 Fimbrial adhesin F17-AG, lectin domain CH60_RS16550 PF01497 Periplasmic binding protein CH60_RS16570 PF01312 FlhB HrpN YscU SpaS Family CH60_RS16575 PF01311 Bacterial export proteins, family 1 CH60_RS16580 PF01313 Bacterial export proteins, family 3 CH60_RS16585 PF00813 FliP family CH60_RS16590 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH60_RS16600 PF02954 Bacterial regulatory protein, Fis family CH60_RS16600 PF00072 Response regulator receiver domain CH60_RS16600 PF00158 Sigma-54 interaction domain CH60_RS16605 PF02049 Flagellar hook-basal body complex protein FliE CH60_RS16610 PF01514 Secretory protein of YscJ/FliF family CH60_RS16610 PF08345 Flagellar M-ring protein C-terminal CH60_RS16625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH60_RS16625 PF18269 T3SS EscN ATPase C-terminal domain CH60_RS16645 PF13144 Chaperone for flagella basal body P-ring formation CH60_RS16650 PF00460 Flagella basal body rod protein CH60_RS16655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS16655 PF00460 Flagella basal body rod protein CH60_RS16660 PF03963 Flagellar hook capping protein - N-terminal region CH60_RS16660 PF13860 FlgD Ig-like domain CH60_RS16660 PF13861 FlgD Tudor-like domain CH60_RS16665 PF00460 Flagella basal body rod protein CH60_RS16665 PF07559 Flagellar basal body protein FlaE CH60_RS16665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS16670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS16670 PF00460 Flagella basal body rod protein CH60_RS16675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS16675 PF00460 Flagella basal body rod protein CH60_RS16680 PF02107 Flagellar L-ring protein CH60_RS16685 PF02119 Flagellar P-ring protein CH60_RS16695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH60_RS16695 PF00460 Flagella basal body rod protein CH60_RS16715 PF00486 Transcriptional regulatory protein, C terminal CH60_RS16715 PF18500 CadC C-terminal domain 1 CH60_RS16720 PF00669 Bacterial flagellin N-terminal helical region CH60_RS16720 PF00700 Bacterial flagellin C-terminal helical region CH60_RS16725 PF00700 Bacterial flagellin C-terminal helical region CH60_RS16725 PF00669 Bacterial flagellin N-terminal helical region CH60_RS16730 PF00669 Bacterial flagellin N-terminal helical region CH60_RS16730 PF00700 Bacterial flagellin C-terminal helical region CH60_RS16735 PF00669 Bacterial flagellin N-terminal helical region CH60_RS16735 PF00700 Bacterial flagellin C-terminal helical region CH60_RS16745 PF02465 Flagellar hook-associated protein 2 N-terminus CH60_RS16745 PF07195 Flagellar hook-associated protein 2 C-terminus CH60_RS16745 PF07196 Flagellin hook IN motif CH60_RS16770 PF04542 Sigma-70 region 2 CH60_RS16770 PF04545 Sigma-70, region 4 CH60_RS16775 PF01618 MotA/TolQ/ExbB proton channel family CH60_RS16780 PF00691 OmpA family CH60_RS16780 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH60_RS16825 PF13276 HTH-like domain CH60_RS16825 PF00665 Integrase core domain CH60_RS16825 PF13333 Integrase core domain CH60_RS16830 PF05947 Type VI secretion system, TssF CH60_RS16840 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH60_RS16850 PF05638 Type VI secretion system effector, Hcp CH60_RS16860 PF07148 Maltose operon periplasmic protein precursor (MalM) CH60_RS16865 PF02264 LamB porin CH60_RS16870 PF00005 ABC transporter CH60_RS16870 PF17912 MalK OB fold domain CH60_RS16880 PF01547 Bacterial extracellular solute-binding protein CH60_RS16885 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS16885 PF14785 Maltose transport system permease protein MalF P2 domain CH60_RS16890 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS16895 PF06146 Phosphate-starvation-inducible E CH60_RS16900 PF00342 Phosphoglucose isomerase CH60_RS16905 PF01842 ACT domain CH60_RS16905 PF00696 Amino acid kinase family CH60_RS16910 PF08479 POTRA domain, ShlB-type CH60_RS16910 PF17287 POTRA domain CH60_RS16910 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH60_RS16915 PF13332 Hemagglutinin repeat CH60_RS16915 PF05860 haemagglutination activity domain CH60_RS16920 PF02965 Vitamin B12 dependent methionine synthase, activation domain CH60_RS16920 PF02574 Homocysteine S-methyltransferase CH60_RS16920 PF02310 B12 binding domain CH60_RS16920 PF02607 B12 binding domain CH60_RS16920 PF00809 Pterin binding enzyme CH60_RS16925 PF01614 Bacterial transcriptional regulator CH60_RS16925 PF09339 IclR helix-turn-helix domain CH60_RS16930 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CH60_RS16935 PF00463 Isocitrate lyase family CH60_RS16940 PF01274 Malate synthase CH60_RS16945 PF04204 Homoserine O-succinyltransferase CH60_RS16955 PF00872 Transposase, Mutator family CH60_RS16995 PF01808 AICARFT/IMPCHase bienzyme CH60_RS16995 PF02142 MGS-like domain CH60_RS17000 PF02844 Phosphoribosylglycinamide synthetase, N domain CH60_RS17000 PF02843 Phosphoribosylglycinamide synthetase, C domain CH60_RS17000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CH60_RS17005 PF07356 Protein of unknown function (DUF1481) CH60_RS17010 PF00216 Bacterial DNA-binding protein CH60_RS17015 PF04222 Protein of unknown function (DUF416) CH60_RS17020 PF04493 Endonuclease V CH60_RS17025 PF01208 Uroporphyrinogen decarboxylase (URO-D) CH60_RS17035 PF09297 NADH pyrophosphatase zinc ribbon domain CH60_RS17035 PF00293 NUDIX domain CH60_RS17040 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CH60_RS17050 PF01964 Radical SAM ThiC family CH60_RS17050 PF13667 ThiC-associated domain CH60_RS17055 PF02581 Thiamine monophosphate synthase CH60_RS17060 PF00899 ThiF family CH60_RS17070 PF05690 Thiazole biosynthesis protein ThiG CH60_RS17075 PF06968 Biotin and Thiamin Synthesis associated domain CH60_RS17075 PF04055 Radical SAM superfamily CH60_RS17085 PF00623 RNA polymerase Rpb1, domain 2 CH60_RS17085 PF04983 RNA polymerase Rpb1, domain 3 CH60_RS17085 PF05000 RNA polymerase Rpb1, domain 4 CH60_RS17085 PF04998 RNA polymerase Rpb1, domain 5 CH60_RS17085 PF04997 RNA polymerase Rpb1, domain 1 CH60_RS17090 PF04563 RNA polymerase beta subunit CH60_RS17090 PF04561 RNA polymerase Rpb2, domain 2 CH60_RS17090 PF00562 RNA polymerase Rpb2, domain 6 CH60_RS17090 PF04560 RNA polymerase Rpb2, domain 7 CH60_RS17090 PF04565 RNA polymerase Rpb2, domain 3 CH60_RS17090 PF10385 RNA polymerase beta subunit external 1 domain CH60_RS17095 PF00542 Ribosomal protein L7/L12 C-terminal domain CH60_RS17095 PF16320 Ribosomal protein L7/L12 dimerisation domain CH60_RS17100 PF00466 Ribosomal protein L10 CH60_RS17105 PF00687 Ribosomal protein L1p/L10e family CH60_RS17110 PF00298 Ribosomal protein L11, RNA binding domain CH60_RS17110 PF03946 Ribosomal protein L11, N-terminal domain CH60_RS17115 PF00467 KOW motif CH60_RS17115 PF02357 Transcription termination factor nusG CH60_RS17120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CH60_RS17125 PF03144 Elongation factor Tu domain 2 CH60_RS17125 PF03143 Elongation factor Tu C-terminal domain CH60_RS17125 PF00009 Elongation factor Tu GTP binding domain CH60_RS17150 PF01695 IstB-like ATP binding protein CH60_RS17155 PF00665 Integrase core domain CH60_RS17155 PF02796 Helix-turn-helix domain of resolvase CH60_RS17165 PF01797 Transposase IS200 like CH60_RS17170 PF00884 Sulfatase CH60_RS17175 PF08220 DeoR-like helix-turn-helix domain CH60_RS17175 PF00455 DeoR C terminal sensor domain CH60_RS17180 PF08013 Tagatose 6 phosphate kinase CH60_RS17185 PF01380 SIS domain CH60_RS17190 PF03830 PTS system sorbose subfamily IIB component CH60_RS17195 PF03609 PTS system sorbose-specific iic component CH60_RS17200 PF03613 PTS system mannose/fructose/sorbose family IID component CH60_RS17205 PF03610 PTS system fructose IIA component CH60_RS17210 PF01979 Amidohydrolase family CH60_RS17220 PF07470 Glycosyl Hydrolase Family 88 CH60_RS17225 PF04055 Radical SAM superfamily CH60_RS17225 PF13186 Iron-sulfur cluster-binding domain CH60_RS17230 PF00884 Sulfatase CH60_RS17240 PF01116 Fructose-bisphosphate aldolase class-II CH60_RS17255 PF00356 Bacterial regulatory proteins, lacI family CH60_RS17260 PF07690 Major Facilitator Superfamily CH60_RS17265 PF16338 Domain of unknown function (DUF4968) CH60_RS17265 PF17137 Domain of unknown function (DUF5110) CH60_RS17265 PF13802 Galactose mutarotase-like CH60_RS17265 PF01055 Glycosyl hydrolases family 31 CH60_RS17270 PF00356 Bacterial regulatory proteins, lacI family CH60_RS17275 PF02264 LamB porin CH60_RS17280 PF02378 Phosphotransferase system, EIIC CH60_RS17280 PF00367 phosphotransferase system, EIIB CH60_RS17285 PF02449 Beta-galactosidase CH60_RS17285 PF08533 Beta-galactosidase C-terminal domain CH60_RS17285 PF08532 Beta-galactosidase trimerisation domain CH60_RS17290 PF07745 Glycosyl hydrolase family 53 CH60_RS17295 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS17300 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS17305 PF13416 Bacterial extracellular solute-binding protein CH60_RS17310 PF00005 ABC transporter CH60_RS17310 PF17912 MalK OB fold domain CH60_RS17315 PF00005 ABC transporter CH60_RS17320 PF02653 Branched-chain amino acid transport system / permease component CH60_RS17325 PF13407 Periplasmic binding protein domain CH60_RS17335 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CH60_RS17340 PF03551 Transcriptional regulator PadR-like family CH60_RS17435 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CH60_RS17440 PF15723 Motility quorum-sensing regulator, toxin of MqsA CH60_RS17465 PF00589 Phage integrase family CH60_RS17465 PF13356 Arm DNA-binding domain CH60_RS17465 PF14659 Phage integrase, N-terminal SAM-like domain CH60_RS17475 PF00152 tRNA synthetases class II (D, K and N) CH60_RS17475 PF01336 OB-fold nucleic acid binding domain CH60_RS17480 PF00472 RF-1 domain CH60_RS17480 PF03462 PCRF domain CH60_RS17485 PF02272 DHHA1 domain CH60_RS17485 PF17768 RecJ OB domain CH60_RS17485 PF01368 DHH family CH60_RS17490 PF10411 Disulfide bond isomerase protein N-terminus CH60_RS17490 PF13098 Thioredoxin-like domain CH60_RS17495 PF00589 Phage integrase family CH60_RS17495 PF02899 Phage integrase, N-terminal SAM-like domain CH60_RS17500 PF00258 Flavodoxin CH60_RS17505 PF06123 Inner membrane protein CreD CH60_RS17510 PF00672 HAMP domain CH60_RS17510 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS17515 PF00486 Transcriptional regulatory protein, C terminal CH60_RS17515 PF00072 Response regulator receiver domain CH60_RS17520 PF07254 Membrane-bound toxin component of toxin-antitoxin system CH60_RS17525 PF03937 Flavinator of succinate dehydrogenase CH60_RS17530 PF01571 Aminomethyltransferase folate-binding domain CH60_RS17540 PF03006 Haemolysin-III related CH60_RS17550 PF03895 YadA-like membrane anchor domain CH60_RS17550 PF05662 Coiled stalk of trimeric autotransporter adhesin CH60_RS17550 PF05658 Head domain of trimeric autotransporter adhesin CH60_RS17550 PF13018 Extended Signal Peptide of Type V secretion system CH60_RS17565 PF02347 Glycine cleavage system P-protein CH60_RS17570 PF01597 Glycine cleavage H-protein CH60_RS17575 PF01571 Aminomethyltransferase folate-binding domain CH60_RS17575 PF08669 Glycine cleavage T-protein C-terminal barrel domain CH60_RS17580 PF01494 FAD binding domain CH60_RS17585 PF01494 FAD binding domain CH60_RS17590 PF00557 Metallopeptidase family M24 CH60_RS17590 PF05195 Aminopeptidase P, N-terminal domain CH60_RS17595 PF03695 Uncharacterised protein family (UPF0149) CH60_RS17600 PF05164 Cell division protein ZapA CH60_RS17605 PF01812 5-formyltetrahydrofolate cyclo-ligase family CH60_RS17610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH60_RS17610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH60_RS17610 PF01842 ACT domain CH60_RS17615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH60_RS17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS17620 PF03466 LysR substrate binding domain CH60_RS17625 PF04402 Protein of unknown function (DUF541) CH60_RS17630 PF01810 LysE type translocator CH60_RS17635 PF00924 Mechanosensitive ion channel CH60_RS17635 PF05552 Conserved TM helix CH60_RS17645 PF01116 Fructose-bisphosphate aldolase class-II CH60_RS17650 PF00162 Phosphoglycerate kinase CH60_RS17655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH60_RS17655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH60_RS17660 PF01797 Transposase IS200 like CH60_RS17665 PF02780 Transketolase, C-terminal domain CH60_RS17665 PF00456 Transketolase, thiamine diphosphate binding domain CH60_RS17665 PF02779 Transketolase, pyrimidine binding domain CH60_RS17670 PF01435 Peptidase family M48 CH60_RS17680 PF17810 Arginine decarboxylase helical bundle domain CH60_RS17680 PF17944 Arginine decarboxylase C-terminal helical extension CH60_RS17680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH60_RS17685 PF00438 S-adenosylmethionine synthetase, N-terminal domain CH60_RS17685 PF02773 S-adenosylmethionine synthetase, C-terminal domain CH60_RS17685 PF02772 S-adenosylmethionine synthetase, central domain CH60_RS17690 PF17283 SprT-like zinc ribbon domain CH60_RS17690 PF10263 SprT-like family CH60_RS17695 PF04231 Endonuclease I CH60_RS17700 PF04452 RNA methyltransferase CH60_RS17705 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CH60_RS17705 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CH60_RS17710 PF02622 Uncharacterized ACR, COG1678 CH60_RS17715 PF03652 Holliday junction resolvase CH60_RS17720 PF00795 Carbon-nitrogen hydrolase CH60_RS17725 PF04371 Porphyromonas-type peptidyl-arginine deiminase CH60_RS17730 PF00437 Type II/IV secretion system protein CH60_RS17735 PF01168 Alanine racemase, N-terminal domain CH60_RS17740 PF03807 NADP oxidoreductase coenzyme F420-dependent CH60_RS17740 PF14748 Pyrroline-5-carboxylate reductase dimerisation CH60_RS17745 PF02325 YGGT family CH60_RS17750 PF02594 Uncharacterised ACR, YggU family COG1872 CH60_RS17755 PF01725 Ham1 family CH60_RS17760 PF04055 Radical SAM superfamily CH60_RS17760 PF06969 HemN C-terminal domain CH60_RS17770 PF11647 Membrane Localization Domain CH60_RS17770 PF11713 Peptidase C80 family CH60_RS17770 PF12146 Serine aminopeptidase, S33 CH60_RS17770 PF16671 Actin cross-linking domain CH60_RS17770 PF07634 RtxA repeat CH60_RS17775 PF11101 Protein of unknown function (DUF2884) CH60_RS17780 PF11101 Protein of unknown function (DUF2884) CH60_RS17785 PF04960 Glutaminase CH60_RS17790 PF04320 Protein with unknown function (DUF469) CH60_RS17795 PF02390 Putative methyltransferase CH60_RS17800 PF14815 NUDIX domain CH60_RS17800 PF00730 HhH-GPD superfamily base excision DNA repair protein CH60_RS17800 PF00633 Helix-hairpin-helix motif CH60_RS17800 PF10576 Iron-sulfur binding domain of endonuclease III CH60_RS17805 PF04362 Bacterial Fe(2+) trafficking CH60_RS17810 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CH60_RS17810 PF01464 Transglycosylase SLT domain CH60_RS17820 PF07715 TonB-dependent Receptor Plug Domain CH60_RS17825 PF02653 Branched-chain amino acid transport system / permease component CH60_RS17830 PF00005 ABC transporter CH60_RS17835 PF13407 Periplasmic binding protein domain CH60_RS17840 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH60_RS17840 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH60_RS17840 PF01276 Orn/Lys/Arg decarboxylase, major domain CH60_RS17850 PF00589 Phage integrase family CH60_RS17850 PF02899 Phage integrase, N-terminal SAM-like domain CH60_RS17860 PF03400 IS1 transposase CH60_RS17865 PF03811 InsA N-terminal domain CH60_RS17865 PF12759 InsA C-terminal domain CH60_RS17890 PF03811 InsA N-terminal domain CH60_RS17890 PF12759 InsA C-terminal domain CH60_RS17910 PF04717 Type VI secretion system, phage-baseplate injector CH60_RS17910 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CH60_RS17910 PF13296 Putative type VI secretion system Rhs element Vgr CH60_RS17915 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS17915 PF17871 AAA lid domain CH60_RS17915 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS17915 PF07724 AAA domain (Cdc48 subfamily) CH60_RS17940 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH60_RS17960 PF12759 InsA C-terminal domain CH60_RS17960 PF03811 InsA N-terminal domain CH60_RS17970 PF02517 CPBP intramembrane metalloprotease CH60_RS17975 PF00765 Autoinducer synthase CH60_RS17980 PF03472 Autoinducer binding domain CH60_RS17980 PF00196 Bacterial regulatory proteins, luxR family CH60_RS18000 PF06276 Ferric iron reductase FhuF-like transporter CH60_RS18000 PF04183 IucA / IucC family CH60_RS18005 PF04183 IucA / IucC family CH60_RS18005 PF06276 Ferric iron reductase FhuF-like transporter CH60_RS18015 PF06276 Ferric iron reductase FhuF-like transporter CH60_RS18015 PF04183 IucA / IucC family CH60_RS18020 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CH60_RS18025 PF00593 TonB dependent receptor CH60_RS18025 PF07715 TonB-dependent Receptor Plug Domain CH60_RS18040 PF00356 Bacterial regulatory proteins, lacI family CH60_RS18045 PF00939 Sodium:sulfate symporter transmembrane region CH60_RS18060 PF03527 RHS protein CH60_RS18060 PF05593 RHS Repeat CH60_RS18070 PF04717 Type VI secretion system, phage-baseplate injector CH60_RS18075 PF12951 Passenger-associated-transport-repeat CH60_RS18080 PF12951 Passenger-associated-transport-repeat CH60_RS18090 PF02447 GntP family permease CH60_RS18105 PF00664 ABC transporter transmembrane region CH60_RS18105 PF00005 ABC transporter CH60_RS18110 PF04954 Siderophore-interacting protein CH60_RS18110 PF08021 Siderophore-interacting FAD-binding domain CH60_RS18110 PF00005 ABC transporter CH60_RS18110 PF00664 ABC transporter transmembrane region CH60_RS18120 PF00975 Thioesterase domain CH60_RS18135 PF00550 Phosphopantetheine attachment site CH60_RS18135 PF08242 Methyltransferase domain CH60_RS18135 PF00668 Condensation domain CH60_RS18135 PF00501 AMP-binding enzyme CH60_RS18140 PF00501 AMP-binding enzyme CH60_RS18140 PF13193 AMP-binding enzyme C-terminal domain CH60_RS18140 PF00668 Condensation domain CH60_RS18145 PF00501 AMP-binding enzyme CH60_RS18145 PF00668 Condensation domain CH60_RS18145 PF08242 Methyltransferase domain CH60_RS18145 PF00550 Phosphopantetheine attachment site CH60_RS18150 PF00501 AMP-binding enzyme CH60_RS18150 PF13193 AMP-binding enzyme C-terminal domain CH60_RS18150 PF00668 Condensation domain CH60_RS18150 PF00202 Aminotransferase class-III CH60_RS18150 PF00109 Beta-ketoacyl synthase, N-terminal domain CH60_RS18150 PF02801 Beta-ketoacyl synthase, C-terminal domain CH60_RS18150 PF00550 Phosphopantetheine attachment site CH60_RS18150 PF16197 Ketoacyl-synthetase C-terminal extension CH60_RS18155 PF07715 TonB-dependent Receptor Plug Domain CH60_RS18155 PF00593 TonB dependent receptor CH60_RS18175 PF01695 IstB-like ATP binding protein CH60_RS18180 PF07687 Peptidase dimerisation domain CH60_RS18180 PF01546 Peptidase family M20/M25/M40 CH60_RS18185 PF03806 AbgT putative transporter family CH60_RS18190 PF14496 C-terminal novel E3 ligase, LRR-interacting CH60_RS18190 PF12468 Type III secretion system leucine rich repeat protein CH60_RS18195 PF14496 C-terminal novel E3 ligase, LRR-interacting CH60_RS18195 PF12468 Type III secretion system leucine rich repeat protein CH60_RS18195 PF14496 C-terminal novel E3 ligase, LRR-interacting CH60_RS18195 PF12468 Type III secretion system leucine rich repeat protein CH60_RS18200 PF14496 C-terminal novel E3 ligase, LRR-interacting CH60_RS18200 PF12468 Type III secretion system leucine rich repeat protein CH60_RS18205 PF03797 Autotransporter beta-domain CH60_RS18215 PF07906 ShET2 enterotoxin, N-terminal region CH60_RS18220 PF00873 AcrB/AcrD/AcrF family CH60_RS18225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS18225 PF00529 HlyD membrane-fusion protein of T1SS CH60_RS18230 PF00990 Diguanylate cyclase, GGDEF domain CH60_RS18230 PF00563 EAL domain CH60_RS18230 PF08448 PAS fold CH60_RS18230 PF08447 PAS fold CH60_RS18235 PF13276 HTH-like domain CH60_RS18235 PF00665 Integrase core domain CH60_RS18235 PF13333 Integrase core domain CH60_RS18245 PF05947 Type VI secretion system, TssF CH60_RS18265 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH60_RS18275 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS18275 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS18275 PF17871 AAA lid domain CH60_RS18275 PF07724 AAA domain (Cdc48 subfamily) CH60_RS18310 PF04717 Type VI secretion system, phage-baseplate injector CH60_RS18325 PF03527 RHS protein CH60_RS18325 PF05593 RHS Repeat CH60_RS18355 PF04717 Type VI secretion system, phage-baseplate injector CH60_RS18365 PF03527 RHS protein CH60_RS18365 PF05593 RHS Repeat CH60_RS18380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH60_RS18380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH60_RS18385 PF12833 Helix-turn-helix domain CH60_RS18385 PF02311 AraC-like ligand binding domain CH60_RS18390 PF05025 RbsD / FucU transport protein family CH60_RS18395 PF00294 pfkB family carbohydrate kinase CH60_RS18400 PF01791 DeoC/LacD family aldolase CH60_RS18405 PF03358 NADPH-dependent FMN reductase CH60_RS18415 PF00296 Luciferase-like monooxygenase CH60_RS18420 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS18425 PF00005 ABC transporter CH60_RS18430 PF04221 RelB antitoxin CH60_RS18435 PF00860 Permease family CH60_RS18440 PF00999 Sodium/hydrogen exchanger family CH60_RS18450 PF03279 Bacterial lipid A biosynthesis acyltransferase CH60_RS18460 PF00005 ABC transporter CH60_RS18465 PF02653 Branched-chain amino acid transport system / permease component CH60_RS18475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS18475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS18480 PF01380 SIS domain CH60_RS18480 PF00571 CBS domain CH60_RS18485 PF02798 Glutathione S-transferase, N-terminal domain CH60_RS18510 PF00313 'Cold-shock' DNA-binding domain CH60_RS18515 PF00313 'Cold-shock' DNA-binding domain CH60_RS18525 PF05433 Glycine zipper 2TM domain CH60_RS18530 PF00753 Metallo-beta-lactamase superfamily CH60_RS18535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CH60_RS18535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH60_RS18540 PF02627 Carboxymuconolactone decarboxylase family CH60_RS18545 PF07690 Major Facilitator Superfamily CH60_RS18560 PF02954 Bacterial regulatory protein, Fis family CH60_RS18565 PF01207 Dihydrouridine synthase (Dus) CH60_RS18575 PF00474 Sodium:solute symporter family CH60_RS18580 PF06196 Protein of unknown function (DUF997) CH60_RS18585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH60_RS18585 PF00289 Biotin carboxylase, N-terminal domain CH60_RS18585 PF02785 Biotin carboxylase C-terminal domain CH60_RS18590 PF00364 Biotin-requiring enzyme CH60_RS18595 PF01220 Dehydroquinase class II CH60_RS18600 PF01794 Ferric reductase like transmembrane component CH60_RS18605 PF00174 Oxidoreductase molybdopterin binding domain CH60_RS18610 PF00107 Zinc-binding dehydrogenase CH60_RS18610 PF08240 Alcohol dehydrogenase GroES-like domain CH60_RS18615 PF00563 EAL domain CH60_RS18615 PF17157 Gammaproteobacterial periplasmic sensor domain CH60_RS18615 PF00990 Diguanylate cyclase, GGDEF domain CH60_RS18625 PF04085 rod shape-determining protein MreC CH60_RS18630 PF04093 rod shape-determining protein MreD CH60_RS18635 PF02545 Maf-like protein CH60_RS18640 PF00575 S1 RNA binding domain CH60_RS18640 PF10150 Ribonuclease E/G family CH60_RS18645 PF13502 AsmA-like C-terminal region CH60_RS18645 PF13116 Protein of unknown function CH60_RS18650 PF00795 Carbon-nitrogen hydrolase CH60_RS18655 PF01523 Putative modulator of DNA gyrase CH60_RS18660 PF14431 YwqJ-like deaminase CH60_RS18660 PF18807 Tripartite Tc toxins repeat CH60_RS18665 PF05785 Rho-activating domain of cytotoxic necrotizing factor CH60_RS18665 PF18807 Tripartite Tc toxins repeat CH60_RS18690 PF12256 Insecticide toxin TcdB middle/N-terminal region CH60_RS18690 PF12255 Insecticide toxin TcdB middle/C-terminal region CH60_RS18690 PF03534 Salmonella virulence plasmid 65kDa B protein CH60_RS18695 PF18413 Neuraminidase-like domain CH60_RS18695 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain CH60_RS18705 PF03466 LysR substrate binding domain CH60_RS18705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS18710 PF03466 LysR substrate binding domain CH60_RS18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS18715 PF07869 Protein of unknown function (DUF1656) CH60_RS18720 PF13533 Biotin-lipoyl like CH60_RS18725 PF04632 Fusaric acid resistance protein family CH60_RS18730 PF00171 Aldehyde dehydrogenase family CH60_RS18735 PF00171 Aldehyde dehydrogenase family CH60_RS18745 PF01337 Barstar (barnase inhibitor) CH60_RS18750 PF04751 Protein of unknown function (DUF615) CH60_RS18755 PF01523 Putative modulator of DNA gyrase CH60_RS18765 PF07361 Cytochrome b562 CH60_RS18770 PF01272 Transcription elongation factor, GreA/GreB, C-term CH60_RS18770 PF14760 Rnk N-terminus CH60_RS18775 PF00128 Alpha amylase, catalytic domain CH60_RS18775 PF11941 Domain of unknown function (DUF3459) CH60_RS18780 PF00367 phosphotransferase system, EIIB CH60_RS18780 PF02378 Phosphotransferase system, EIIC CH60_RS18785 PF00356 Bacterial regulatory proteins, lacI family CH60_RS18795 PF01042 Endoribonuclease L-PSP CH60_RS18800 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CH60_RS18800 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CH60_RS18805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH60_RS18805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH60_RS18810 PF00381 PTS HPr component phosphorylation site CH60_RS18815 PF03668 P-loop ATPase protein family CH60_RS18820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH60_RS18830 PF04552 Sigma-54, DNA binding domain CH60_RS18830 PF04963 Sigma-54 factor, core binding domain CH60_RS18830 PF00309 Sigma-54 factor, Activator interacting domain (AID) CH60_RS18835 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH60_RS18835 PF00005 ABC transporter CH60_RS18840 PF03968 OstA-like protein CH60_RS18845 PF06835 Lipopolysaccharide-assembly, LptC-related CH60_RS18855 PF01380 SIS domain CH60_RS18855 PF00571 CBS domain CH60_RS18860 PF01699 Sodium/calcium exchanger protein CH60_RS18865 PF00005 ABC transporter CH60_RS18870 PF02405 Permease MlaE CH60_RS18875 PF02470 MlaD protein CH60_RS18880 PF05494 MlaC protein CH60_RS18885 PF13466 STAS domain CH60_RS18890 PF01722 BolA-like protein CH60_RS18895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH60_RS18900 PF13180 PDZ domain CH60_RS18905 PF01797 Transposase IS200 like CH60_RS18910 PF08502 LeuA allosteric (dimerisation) domain CH60_RS18910 PF00682 HMGL-like CH60_RS18915 PF00180 Isocitrate/isopropylmalate dehydrogenase CH60_RS18920 PF00330 Aconitase family (aconitate hydratase) CH60_RS18925 PF00694 Aconitase C-terminal domain CH60_RS18935 PF00665 Integrase core domain CH60_RS18935 PF02796 Helix-turn-helix domain of resolvase CH60_RS18940 PF00694 Aconitase C-terminal domain CH60_RS18945 PF07690 Major Facilitator Superfamily CH60_RS18955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH60_RS18955 PF12793 Sugar transport-related sRNA regulator N-term CH60_RS18970 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS18975 PF00005 ABC transporter CH60_RS18980 PF09335 SNARE associated Golgi protein CH60_RS18985 PF03104 DNA polymerase family B, exonuclease domain CH60_RS18985 PF00136 DNA polymerase family B CH60_RS18990 PF18337 RapA N-terminal Tudor like domain CH60_RS18990 PF00271 Helicase conserved C-terminal domain CH60_RS18990 PF18339 RapA N-terminal Tudor like domain 1 CH60_RS18990 PF00176 SNF2 family N-terminal domain CH60_RS18990 PF12137 RNA polymerase recycling family C-terminal CH60_RS19000 PF06761 Intracellular multiplication and human macrophage-killing CH60_RS19000 PF14331 ImcF-related N-terminal domain CH60_RS19000 PF06744 Type VI secretion protein IcmF C-terminal CH60_RS19005 PF05736 OprF membrane domain CH60_RS19005 PF00691 OmpA family CH60_RS19010 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH60_RS19045 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS19045 PF17871 AAA lid domain CH60_RS19045 PF07724 AAA domain (Cdc48 subfamily) CH60_RS19045 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS19055 PF05947 Type VI secretion system, TssF CH60_RS19070 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH60_RS19075 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH60_RS19090 PF00849 RNA pseudouridylate synthase CH60_RS19095 PF00226 DnaJ domain CH60_RS19095 PF05099 Tellurite resistance protein TerB CH60_RS19100 PF03968 OstA-like protein CH60_RS19100 PF04453 LPS transport system D CH60_RS19105 PF09312 SurA N-terminal domain CH60_RS19105 PF00639 PPIC-type PPIASE domain CH60_RS19110 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CH60_RS19115 PF00398 Ribosomal RNA adenine dimethylase CH60_RS19120 PF04379 ApaG domain CH60_RS19125 PF00149 Calcineurin-like phosphoesterase CH60_RS19145 PF00186 Dihydrofolate reductase CH60_RS19150 PF12821 Threonine/Serine exporter, ThrE CH60_RS19155 PF06738 Putative threonine/serine exporter CH60_RS19160 PF01810 LysE type translocator CH60_RS19165 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH60_RS19165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH60_RS19165 PF02142 MGS-like domain CH60_RS19170 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CH60_RS19170 PF00117 Glutamine amidotransferase class-I CH60_RS19175 PF05173 Dihydrodipicolinate reductase, C-terminus CH60_RS19175 PF01113 Dihydrodipicolinate reductase, N-terminus CH60_RS19180 PF01797 Transposase IS200 like CH60_RS19195 PF02401 LytB protein CH60_RS19200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH60_RS19205 PF01252 Signal peptidase (SPase) II CH60_RS19210 PF08264 Anticodon-binding domain of tRNA CH60_RS19210 PF06827 Zinc finger found in FPG and IleRS CH60_RS19210 PF00133 tRNA synthetases class I (I, L, M and V) CH60_RS19215 PF01687 Riboflavin kinase CH60_RS19215 PF06574 FAD synthetase CH60_RS19225 PF01649 Ribosomal protein S20 CH60_RS19230 PF03466 LysR substrate binding domain CH60_RS19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS19235 PF06965 Na+/H+ antiporter 1 CH60_RS19240 PF01556 DnaJ C terminal domain CH60_RS19240 PF00684 DnaJ central domain CH60_RS19240 PF00226 DnaJ domain CH60_RS19245 PF00012 Hsp70 protein CH60_RS19250 PF01184 GPR1/FUN34/yaaH family CH60_RS19260 PF07690 Major Facilitator Superfamily CH60_RS19265 PF00994 Probable molybdopterin binding domain CH60_RS19275 PF03883 Peroxide stress protein YaaA CH60_RS19280 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS19280 PF14821 Threonine synthase N terminus CH60_RS19285 PF00288 GHMP kinases N terminal domain CH60_RS19285 PF08544 GHMP kinases C terminal CH60_RS19295 PF00486 Transcriptional regulatory protein, C terminal CH60_RS19295 PF00072 Response regulator receiver domain CH60_RS19300 PF05981 CreA protein CH60_RS19305 PF06445 GyrI-like small molecule binding domain CH60_RS19305 PF12833 Helix-turn-helix domain CH60_RS19310 PF00300 Histidine phosphatase superfamily (branch 1) CH60_RS19315 PF01931 Protein of unknown function DUF84 CH60_RS19320 PF01371 Trp repressor protein CH60_RS19325 PF01464 Transglycosylase SLT domain CH60_RS19325 PF14718 Soluble lytic murein transglycosylase L domain CH60_RS19330 PF00690 Cation transporter/ATPase, N-terminus CH60_RS19330 PF00689 Cation transporting ATPase, C-terminus CH60_RS19340 PF00990 Diguanylate cyclase, GGDEF domain CH60_RS19340 PF17152 Periplasmic sensor domain CH60_RS19345 PF00691 OmpA family CH60_RS19350 PF12848 ABC transporter CH60_RS19350 PF00005 ABC transporter CH60_RS19355 PF02661 Fic/DOC family CH60_RS19360 PF13521 AAA domain CH60_RS19360 PF01381 Helix-turn-helix CH60_RS19365 PF18073 Rubredoxin metal binding domain CH60_RS19370 PF18429 Domain of unknown function (DUF5609) CH60_RS19375 PF10144 Bacterial virulence factor haemolysin CH60_RS19380 PF01048 Phosphorylase superfamily CH60_RS19385 PF01676 Metalloenzyme superfamily CH60_RS19390 PF02885 Glycosyl transferase family, helical bundle domain CH60_RS19390 PF00591 Glycosyl transferase family, a/b domain CH60_RS19390 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CH60_RS19395 PF01791 DeoC/LacD family aldolase CH60_RS19400 PF01773 Na+ dependent nucleoside transporter N-terminus CH60_RS19400 PF07670 Nucleoside recognition CH60_RS19400 PF07662 Na+ dependent nucleoside transporter C-terminus CH60_RS19405 PF01026 TatD related DNase CH60_RS19410 PF01734 Patatin-like phospholipase CH60_RS19415 PF07043 Protein of unknown function (DUF1328) CH60_RS19420 PF04972 BON domain CH60_RS19425 PF16658 Class II release factor RF3, C-terminal domain CH60_RS19425 PF03144 Elongation factor Tu domain 2 CH60_RS19425 PF00009 Elongation factor Tu GTP binding domain CH60_RS19430 PF00583 Acetyltransferase (GNAT) family CH60_RS19435 PF03603 DNA polymerase III psi subunit CH60_RS19440 PF08468 Methyltransferase small domain N-terminal CH60_RS19440 PF05175 Methyltransferase small domain CH60_RS19450 PF07256 Protein of unknown function (DUF1435) CH60_RS19455 PF00990 Diguanylate cyclase, GGDEF domain CH60_RS19460 PF01095 Pectinesterase CH60_RS19480 PF00873 AcrB/AcrD/AcrF family CH60_RS19485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS19505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH60_RS19510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS19510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS19515 PF04198 Putative sugar-binding domain CH60_RS19515 PF00325 Bacterial regulatory proteins, crp family CH60_RS19525 PF00005 ABC transporter CH60_RS19530 PF02653 Branched-chain amino acid transport system / permease component CH60_RS19535 PF02653 Branched-chain amino acid transport system / permease component CH60_RS19540 PF13407 Periplasmic binding protein domain CH60_RS19545 PF01791 DeoC/LacD family aldolase CH60_RS19550 PF03992 Antibiotic biosynthesis monooxygenase CH60_RS19555 PF10696 Protein of unknown function (DUF2501) CH60_RS19560 PF00391 PEP-utilising enzyme, mobile domain CH60_RS19560 PF00381 PTS HPr component phosphorylation site CH60_RS19560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH60_RS19560 PF02896 PEP-utilising enzyme, TIM barrel domain CH60_RS19560 PF05524 PEP-utilising enzyme, N-terminal CH60_RS19570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH60_RS19575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH60_RS19580 PF12833 Helix-turn-helix domain CH60_RS19590 PF05987 Bacterial protein of unknown function (DUF898) CH60_RS19635 PF01555 DNA methylase CH60_RS19640 PF01527 Transposase CH60_RS19655 PF07728 AAA domain (dynein-related subfamily) CH60_RS19655 PF12102 Domain of unknown function (DUF3578) CH60_RS19665 PF01695 IstB-like ATP binding protein CH60_RS19675 PF00293 NUDIX domain CH60_RS19680 PF07516 SecA Wing and Scaffold domain CH60_RS19680 PF01043 SecA preprotein cross-linking domain CH60_RS19680 PF07517 SecA DEAD-like domain CH60_RS19680 PF02810 SEC-C motif CH60_RS19685 PF06558 Secretion monitor precursor protein (SecM) CH60_RS19695 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CH60_RS19700 PF12327 FtsZ family, C-terminal domain CH60_RS19700 PF00091 Tubulin/FtsZ family, GTPase domain CH60_RS19705 PF02491 SHS2 domain inserted in FTSA CH60_RS19710 PF08478 POTRA domain, FtsQ-type CH60_RS19710 PF03799 Cell division protein FtsQ CH60_RS19715 PF07478 D-ala D-ala ligase C-terminus CH60_RS19715 PF01820 D-ala D-ala ligase N-terminus CH60_RS19720 PF02875 Mur ligase family, glutamate ligase domain CH60_RS19720 PF08245 Mur ligase middle domain CH60_RS19720 PF01225 Mur ligase family, catalytic domain CH60_RS19725 PF03033 Glycosyltransferase family 28 N-terminal domain CH60_RS19725 PF04101 Glycosyltransferase family 28 C-terminal domain CH60_RS19730 PF01098 Cell cycle protein CH60_RS19735 PF02875 Mur ligase family, glutamate ligase domain CH60_RS19735 PF08245 Mur ligase middle domain CH60_RS19740 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CH60_RS19740 PF00953 Glycosyl transferase family 4 CH60_RS19745 PF08245 Mur ligase middle domain CH60_RS19745 PF01225 Mur ligase family, catalytic domain CH60_RS19745 PF02875 Mur ligase family, glutamate ligase domain CH60_RS19750 PF01225 Mur ligase family, catalytic domain CH60_RS19750 PF02875 Mur ligase family, glutamate ligase domain CH60_RS19750 PF08245 Mur ligase middle domain CH60_RS19755 PF03717 Penicillin-binding Protein dimerisation domain CH60_RS19755 PF00905 Penicillin binding protein transpeptidase domain CH60_RS19760 PF04999 Cell division protein FtsL CH60_RS19765 PF01795 MraW methylase family CH60_RS19770 PF02381 MraZ protein, putative antitoxin-like CH60_RS19775 PF06610 L-alanine exporter CH60_RS19780 PF00356 Bacterial regulatory proteins, lacI family CH60_RS19780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH60_RS19795 PF10369 Small subunit of acetolactate synthase CH60_RS19800 PF00205 Thiamine pyrophosphate enzyme, central domain CH60_RS19800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH60_RS19800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH60_RS19810 PF00501 AMP-binding enzyme CH60_RS19820 PF03466 LysR substrate binding domain CH60_RS19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS19835 PF01797 Transposase IS200 like CH60_RS19840 PF00595 PDZ domain CH60_RS19840 PF13180 PDZ domain CH60_RS19845 PF06295 Protein of unknown function (DUF1043) CH60_RS19850 PF03969 AFG1-like ATPase CH60_RS19855 PF00572 Ribosomal protein L13 CH60_RS19860 PF00380 Ribosomal protein S9/S16 CH60_RS19870 PF02798 Glutathione S-transferase, N-terminal domain CH60_RS19870 PF00043 Glutathione S-transferase, C-terminal domain CH60_RS19875 PF04386 Stringent starvation protein B CH60_RS19885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH60_RS19885 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS19890 PF01493 GXGXG motif CH60_RS19890 PF00310 Glutamine amidotransferases class-II CH60_RS19890 PF04898 Glutamate synthase central domain CH60_RS19890 PF01645 Conserved region in glutamate synthase CH60_RS19895 PF16199 Radical_SAM C-terminal domain CH60_RS19895 PF04055 Radical SAM superfamily CH60_RS19905 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS19905 PF18415 Histidine kinase receptor ArcB trans-membrane domain CH60_RS19905 PF00989 PAS fold CH60_RS19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS19905 PF01627 Hpt domain CH60_RS19905 PF00072 Response regulator receiver domain CH60_RS19920 PF00912 Transglycosylase CH60_RS19925 PF04972 BON domain CH60_RS19930 PF13580 SIS domain CH60_RS19935 PF02021 Uncharacterised protein family UPF0102 CH60_RS19940 PF04348 LppC putative lipoprotein CH60_RS19945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH60_RS19950 PF17954 Quercetinase C-terminal cupin domain CH60_RS19950 PF02678 Pirin CH60_RS19955 PF03466 LysR substrate binding domain CH60_RS19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS19960 PF13409 Glutathione S-transferase, N-terminal domain CH60_RS19965 PF01695 IstB-like ATP binding protein CH60_RS19975 PF00665 Integrase core domain CH60_RS19975 PF02796 Helix-turn-helix domain of resolvase CH60_RS19980 PF01026 TatD related DNase CH60_RS19985 PF00902 Sec-independent protein translocase protein (TatC) CH60_RS19995 PF02416 mttA/Hcf106 family CH60_RS20000 PF03109 ABC1 family CH60_RS20005 PF02036 SCP-2 sterol transfer family CH60_RS20010 PF01209 ubiE/COQ5 methyltransferase family CH60_RS20015 PF02646 RmuC family CH60_RS20020 PF09335 SNARE associated Golgi protein CH60_RS20025 PF02554 Carbon starvation protein CstA CH60_RS20025 PF13722 5TM C-terminal transporter carbon starvation CstA CH60_RS20035 PF01048 Phosphorylase superfamily CH60_RS20040 PF01738 Dienelactone hydrolase family CH60_RS20045 PF01717 Cobalamin-independent synthase, Catalytic domain CH60_RS20045 PF08267 Cobalamin-independent synthase, N-terminal domain CH60_RS20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS20050 PF03466 LysR substrate binding domain CH60_RS20055 PF00892 EamA-like transporter family CH60_RS20060 PF03547 Membrane transport protein CH60_RS20065 PF03009 Glycerophosphoryl diester phosphodiesterase family CH60_RS20070 PF17912 MalK OB fold domain CH60_RS20070 PF00005 ABC transporter CH60_RS20075 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS20080 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS20085 PF13416 Bacterial extracellular solute-binding protein CH60_RS20125 PF00005 ABC transporter CH60_RS20130 PF00005 ABC transporter CH60_RS20130 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH60_RS20135 PF02653 Branched-chain amino acid transport system / permease component CH60_RS20135 PF11862 Domain of unknown function (DUF3382) CH60_RS20140 PF02653 Branched-chain amino acid transport system / permease component CH60_RS20145 PF13458 Periplasmic binding protein CH60_RS20150 PF12568 Acetyltransferase (GNAT) domain, PanZ CH60_RS20155 PF01797 Transposase IS200 like CH60_RS20165 PF04542 Sigma-70 region 2 CH60_RS20165 PF04545 Sigma-70, region 4 CH60_RS20165 PF00140 Sigma-70 factor, region 1.2 CH60_RS20170 PF02687 FtsX-like permease family CH60_RS20170 PF18075 FtsX extracellular domain CH60_RS20175 PF00005 ABC transporter CH60_RS20180 PF02881 SRP54-type protein, helical bundle domain CH60_RS20180 PF00448 SRP54-type protein, GTPase domain CH60_RS20180 PF02881 SRP54-type protein, helical bundle domain CH60_RS20180 PF00448 SRP54-type protein, GTPase domain CH60_RS20195 PF06611 Protein of unknown function (DUF1145) CH60_RS20210 PF07947 YhhN family CH60_RS20215 PF00403 Heavy-metal-associated domain CH60_RS20220 PF01206 Sulfurtransferase TusA CH60_RS20225 PF02592 Putative vitamin uptake transporter CH60_RS20230 PF08786 DcrB CH60_RS20235 PF13183 4Fe-4S dicluster domain CH60_RS20235 PF02754 Cysteine-rich domain CH60_RS20240 PF00890 FAD binding domain CH60_RS20245 PF01266 FAD dependent oxidoreductase CH60_RS20245 PF04324 BFD-like [2Fe-2S] binding domain CH60_RS20255 PF03009 Glycerophosphoryl diester phosphodiesterase family CH60_RS20270 PF12146 Serine aminopeptidase, S33 CH60_RS20275 PF01810 LysE type translocator CH60_RS20280 PF01810 LysE type translocator CH60_RS20285 PF16124 RecQ zinc-binding CH60_RS20285 PF09382 RQC domain CH60_RS20285 PF00270 DEAD/DEAH box helicase CH60_RS20285 PF00570 HRDC domain CH60_RS20285 PF00271 Helicase conserved C-terminal domain CH60_RS20290 PF02253 Phospholipase A1 CH60_RS20295 PF03061 Thioesterase superfamily CH60_RS20300 PF00892 EamA-like transporter family CH60_RS20305 PF01544 CorA-like Mg2+ transporter protein CH60_RS20310 PF09370 Phosphoenolpyruvate hydrolase-like CH60_RS20325 PF00580 UvrD/REP helicase N-terminal domain CH60_RS20325 PF13361 UvrD-like helicase C-terminal domain CH60_RS20330 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS20335 PF02899 Phage integrase, N-terminal SAM-like domain CH60_RS20335 PF00589 Phage integrase family CH60_RS20340 PF04340 Protein of unknown function, DUF484 CH60_RS20345 PF01678 Diaminopimelate epimerase CH60_RS20350 PF13627 Prokaryotic lipoprotein-attachment site CH60_RS20355 PF01491 Frataxin-like domain CH60_RS20360 PF12633 Adenylate cyclase NT domain CH60_RS20360 PF01295 Adenylate cyclase, class-I CH60_RS20365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CH60_RS20365 PF03900 Porphobilinogen deaminase, C-terminal domain CH60_RS20370 PF02602 Uroporphyrinogen-III synthase HemD CH60_RS20375 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CH60_RS20380 PF07219 HemY protein N-terminus CH60_RS20380 PF07719 Tetratricopeptide repeat CH60_RS20410 PF00324 Amino acid permease CH60_RS20415 PF03808 Glycosyl transferase WecB/TagA/CpsF family CH60_RS20420 PF06899 WzyE protein, O-antigen assembly polymerase CH60_RS20425 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CH60_RS20430 PF01943 Polysaccharide biosynthesis protein CH60_RS20435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH60_RS20445 PF00483 Nucleotidyl transferase CH60_RS20450 PF16363 GDP-mannose 4,6 dehydratase CH60_RS20455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH60_RS20455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH60_RS20455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH60_RS20460 PF02350 UDP-N-acetylglucosamine 2-epimerase CH60_RS20465 PF02706 Chain length determinant protein CH60_RS20470 PF00953 Glycosyl transferase family 4 CH60_RS20475 PF07497 Rho termination factor, RNA-binding domain CH60_RS20475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH60_RS20475 PF07498 Rho termination factor, N-terminal domain CH60_RS20480 PF00085 Thioredoxin CH60_RS20485 PF00270 DEAD/DEAH box helicase CH60_RS20485 PF00271 Helicase conserved C-terminal domain CH60_RS20490 PF02541 Ppx/GppA phosphatase family CH60_RS20495 PF13361 UvrD-like helicase C-terminal domain CH60_RS20495 PF00580 UvrD/REP helicase N-terminal domain CH60_RS20525 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS20525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS20530 PF13954 PapC N-terminal domain CH60_RS20530 PF13953 PapC C-terminal domain CH60_RS20530 PF00577 Outer membrane usher protein CH60_RS20540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS20540 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS20550 PF01320 Colicin immunity protein / pyocin immunity protein CH60_RS20575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CH60_RS20575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CH60_RS20580 PF03466 LysR substrate binding domain CH60_RS20580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS20610 PF00585 C-terminal regulatory domain of Threonine dehydratase CH60_RS20610 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS20615 PF00920 Dehydratase family CH60_RS20620 PF01063 Amino-transferase class IV CH60_RS20630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH60_RS20630 PF00205 Thiamine pyrophosphate enzyme, central domain CH60_RS20630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH60_RS20635 PF01078 Magnesium chelatase, subunit ChlI CH60_RS20635 PF13335 Magnesium chelatase, subunit ChlI C-terminal CH60_RS20640 PF04219 Protein of unknown function, DUF CH60_RS20645 PF03466 LysR substrate binding domain CH60_RS20645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS20650 PF02653 Branched-chain amino acid transport system / permease component CH60_RS20655 PF02653 Branched-chain amino acid transport system / permease component CH60_RS20660 PF00005 ABC transporter CH60_RS20665 PF13407 Periplasmic binding protein domain CH60_RS20705 PF01177 Asp/Glu/Hydantoin racemase CH60_RS20710 PF07715 TonB-dependent Receptor Plug Domain CH60_RS20710 PF00593 TonB dependent receptor CH60_RS20720 PF05958 tRNA (Uracil-5-)-methyltransferase CH60_RS20725 PF07226 Protein of unknown function (DUF1422) CH60_RS20730 PF00440 Bacterial regulatory proteins, tetR family CH60_RS20735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS20735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH60_RS20740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS20740 PF03466 LysR substrate binding domain CH60_RS20745 PF00462 Glutaredoxin CH60_RS20745 PF08534 Redoxin CH60_RS20750 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH60_RS20750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH60_RS20755 PF03544 Gram-negative bacterial TonB protein C-terminal CH60_RS20760 PF00529 HlyD membrane-fusion protein of T1SS CH60_RS20765 PF00005 ABC transporter CH60_RS20765 PF00664 ABC transporter transmembrane region CH60_RS20775 PF00593 TonB dependent receptor CH60_RS20775 PF07715 TonB-dependent Receptor Plug Domain CH60_RS20785 PF00206 Lyase CH60_RS20785 PF14698 Argininosuccinate lyase C-terminal CH60_RS20790 PF00696 Amino acid kinase family CH60_RS20795 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH60_RS20795 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH60_RS20800 PF07687 Peptidase dimerisation domain CH60_RS20800 PF01546 Peptidase family M20/M25/M40 CH60_RS20805 PF00311 Phosphoenolpyruvate carboxylase CH60_RS20820 PF07690 Major Facilitator Superfamily CH60_RS20845 PF13700 Domain of unknown function (DUF4158) CH60_RS20845 PF01526 Tn3 transposase DDE domain CH60_RS20850 PF09107 Elongation factor SelB, winged helix CH60_RS20850 PF00009 Elongation factor Tu GTP binding domain CH60_RS20850 PF03144 Elongation factor Tu domain 2 CH60_RS20850 PF09106 Elongation factor SelB, winged helix CH60_RS20855 PF00009 Elongation factor Tu GTP binding domain CH60_RS20855 PF03144 Elongation factor Tu domain 2 CH60_RS20855 PF09106 Elongation factor SelB, winged helix CH60_RS20855 PF09107 Elongation factor SelB, winged helix CH60_RS20860 PF12390 Selenocysteine synthase N terminal CH60_RS20860 PF03841 L-seryl-tRNA selenium transferase CH60_RS20865 PF04216 Protein involved in formate dehydrogenase formation CH60_RS20870 PF01292 Prokaryotic cytochrome b561 CH60_RS20875 PF13247 4Fe-4S dicluster domain CH60_RS20875 PF09163 Formate dehydrogenase N, transmembrane CH60_RS20880 PF01568 Molydopterin dinucleotide binding domain CH60_RS20880 PF00384 Molybdopterin oxidoreductase CH60_RS20880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH60_RS20885 PF01568 Molydopterin dinucleotide binding domain CH60_RS20885 PF00384 Molybdopterin oxidoreductase CH60_RS20885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH60_RS20890 PF02634 FdhD/NarQ family CH60_RS20895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH60_RS20895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH60_RS20900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH60_RS20900 PF02203 Tar ligand binding domain homologue CH60_RS20900 PF00672 HAMP domain CH60_RS20915 PF10928 Protein of unknown function (DUF2810) CH60_RS20920 PF05068 Mannitol repressor CH60_RS20925 PF01232 Mannitol dehydrogenase Rossmann domain CH60_RS20925 PF08125 Mannitol dehydrogenase C-terminal domain CH60_RS20930 PF02378 Phosphotransferase system, EIIC CH60_RS20930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH60_RS20930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH60_RS20935 PF11254 Protein of unknown function (DUF3053) CH60_RS20940 PF02092 Glycyl-tRNA synthetase beta subunit CH60_RS20940 PF05746 DALR anticodon binding domain CH60_RS20945 PF02091 Glycyl-tRNA synthetase alpha subunit CH60_RS20950 PF03352 Methyladenine glycosylase CH60_RS20960 PF00691 OmpA family CH60_RS20960 PF13488 Glycine zipper CH60_RS20970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH60_RS20970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH60_RS20975 PF00128 Alpha amylase, catalytic domain CH60_RS20985 PF00155 Aminotransferase class I and II CH60_RS20990 PF02080 TrkA-C domain CH60_RS20990 PF06826 Predicted Permease Membrane Region CH60_RS20995 PF00011 Hsp20/alpha crystallin family CH60_RS21000 PF00011 Hsp20/alpha crystallin family CH60_RS21005 PF07119 Protein of unknown function (DUF1375) CH60_RS21010 PF12566 Protein of unknown function (DUF3748) CH60_RS21010 PF07676 WD40-like Beta Propeller Repeat CH60_RS21015 PF12566 Protein of unknown function (DUF3748) CH60_RS21015 PF07676 WD40-like Beta Propeller Repeat CH60_RS21020 PF13291 ACT domain CH60_RS21020 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS21025 PF02423 Ornithine cyclodeaminase/mu-crystallin family CH60_RS21035 PF00665 Integrase core domain CH60_RS21035 PF13333 Integrase core domain CH60_RS21035 PF13276 HTH-like domain CH60_RS21045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS21045 PF01751 Toprim domain CH60_RS21045 PF18053 DNA gyrase B subunit insert domain CH60_RS21045 PF00986 DNA gyrase B subunit, carboxyl terminus CH60_RS21045 PF00204 DNA gyrase B CH60_RS21050 PF02463 RecF/RecN/SMC N terminal domain CH60_RS21060 PF00712 DNA polymerase III beta subunit, N-terminal domain CH60_RS21060 PF02767 DNA polymerase III beta subunit, central domain CH60_RS21060 PF02768 DNA polymerase III beta subunit, C-terminal domain CH60_RS21065 PF08299 Bacterial dnaA protein helix-turn-helix CH60_RS21065 PF00308 Bacterial dnaA protein CH60_RS21065 PF11638 DnaA N-terminal domain CH60_RS21070 PF00468 Ribosomal protein L34 CH60_RS21075 PF00825 Ribonuclease P CH60_RS21080 PF14849 YidC periplasmic domain CH60_RS21080 PF02096 60Kd inner membrane protein CH60_RS21085 PF01926 50S ribosome-binding GTPase CH60_RS21085 PF10396 GTP-binding protein TrmE N-terminus CH60_RS21085 PF12631 MnmE helical domain CH60_RS21090 PF12241 Trans-2-enoyl-CoA reductase catalytic region CH60_RS21090 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CH60_RS21090 PF07055 Enoyl reductase FAD binding domain CH60_RS21105 PF00860 Permease family CH60_RS21110 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS21115 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS21120 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS21125 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH60_RS21135 PF01895 PhoU domain CH60_RS21140 PF00005 ABC transporter CH60_RS21145 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS21150 PF00528 Binding-protein-dependent transport system inner membrane component CH60_RS21155 PF12849 PBP superfamily domain CH60_RS21160 PF01380 SIS domain CH60_RS21165 PF00132 Bacterial transferase hexapeptide (six repeats) CH60_RS21165 PF12804 MobA-like NTP transferase domain CH60_RS21170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CH60_RS21170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CH60_RS21175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH60_RS21175 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH60_RS21180 PF00231 ATP synthase CH60_RS21185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH60_RS21185 PF00306 ATP synthase alpha/beta chain, C terminal domain CH60_RS21185 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH60_RS21190 PF00213 ATP synthase delta (OSCP) subunit CH60_RS21195 PF00430 ATP synthase B/B' CF(0) CH60_RS21200 PF00137 ATP synthase subunit C CH60_RS21205 PF00119 ATP synthase A chain CH60_RS21210 PF03899 ATP synthase I chain CH60_RS21215 PF02527 rRNA small subunit methyltransferase G CH60_RS21220 PF13932 GidA associated domain CH60_RS21220 PF01134 Glucose inhibited division protein A CH60_RS21225 PF00258 Flavodoxin CH60_RS21230 PF01037 Lrp/AsnC ligand binding domain CH60_RS21235 PF03590 Aspartate-ammonia ligase CH60_RS21240 PF05762 VWA domain containing CoxE-like protein CH60_RS21245 PF07728 AAA domain (dynein-related subfamily) CH60_RS21245 PF17868 AAA lid domain CH60_RS21245 PF12592 Protein of unknown function (DUF3763) CH60_RS21250 PF02705 K+ potassium transporter CH60_RS21255 PF05025 RbsD / FucU transport protein family CH60_RS21260 PF00294 pfkB family carbohydrate kinase CH60_RS21270 PF07690 Major Facilitator Superfamily CH60_RS21275 PF07729 FCD domain CH60_RS21275 PF00392 Bacterial regulatory proteins, gntR family CH60_RS21305 PF00872 Transposase, Mutator family CH60_RS21310 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CH60_RS21315 PF12804 MobA-like NTP transferase domain CH60_RS21320 PF06288 Protein of unknown function (DUF1040) CH60_RS21325 PF01636 Phosphotransferase enzyme family CH60_RS21330 PF01323 DSBA-like thioredoxin domain CH60_RS21335 PF01367 5'-3' exonuclease, C-terminal SAM fold CH60_RS21335 PF01612 3'-5' exonuclease CH60_RS21335 PF00476 DNA polymerase family A CH60_RS21335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH60_RS21340 PF01926 50S ribosome-binding GTPase CH60_RS21345 PF04220 Der GTPase activator (YihI) CH60_RS21350 PF04055 Radical SAM superfamily CH60_RS21350 PF06969 HemN C-terminal domain CH60_RS21355 PF02954 Bacterial regulatory protein, Fis family CH60_RS21355 PF00158 Sigma-54 interaction domain CH60_RS21355 PF00072 Response regulator receiver domain CH60_RS21360 PF00989 PAS fold CH60_RS21360 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS21360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS21365 PF00120 Glutamine synthetase, catalytic domain CH60_RS21365 PF03951 Glutamine synthetase, beta-Grasp domain CH60_RS21375 PF00679 Elongation factor G C-terminus CH60_RS21375 PF00009 Elongation factor Tu GTP binding domain CH60_RS21375 PF03144 Elongation factor Tu domain 2 CH60_RS21380 PF13419 Haloacid dehalogenase-like hydrolase CH60_RS21385 PF03631 Virulence factor BrkB CH60_RS21390 PF02580 D-Tyr-tRNA(Tyr) deacylase CH60_RS21395 PF01695 IstB-like ATP binding protein CH60_RS21400 PF02796 Helix-turn-helix domain of resolvase CH60_RS21400 PF00665 Integrase core domain CH60_RS21405 PF00583 Acetyltransferase (GNAT) family CH60_RS21405 PF09500 Putative thioesterase (yiiD_Cterm) CH60_RS21410 PF05170 AsmA family CH60_RS21415 PF00860 Permease family CH60_RS21420 PF03616 Sodium/glutamate symporter CH60_RS21425 PF17191 RecG wedge domain CH60_RS21425 PF00270 DEAD/DEAH box helicase CH60_RS21425 PF00271 Helicase conserved C-terminal domain CH60_RS21430 PF00588 SpoU rRNA Methylase family CH60_RS21430 PF12105 SpoU, rRNA methylase, C-terminal CH60_RS21435 PF02824 TGS domain CH60_RS21435 PF04607 Region found in RelA / SpoT proteins CH60_RS21435 PF13291 ACT domain CH60_RS21440 PF01192 RNA polymerase Rpb6 CH60_RS21445 PF00625 Guanylate kinase CH60_RS21450 PF01653 NAD-dependent DNA ligase adenylation domain CH60_RS21450 PF03120 NAD-dependent DNA ligase OB-fold domain CH60_RS21455 PF03458 UPF0126 domain CH60_RS21460 PF08340 Domain of unknown function (DUF1732) CH60_RS21460 PF03755 YicC-like family, N-terminal region CH60_RS21465 PF01138 3' exoribonuclease family, domain 1 CH60_RS21465 PF03725 3' exoribonuclease family, domain 2 CH60_RS21470 PF00156 Phosphoribosyl transferase domain CH60_RS21475 PF00440 Bacterial regulatory proteins, tetR family CH60_RS21480 PF00692 dUTPase CH60_RS21485 PF04127 DNA / pantothenate metabolism flavoprotein CH60_RS21485 PF02441 Flavoprotein CH60_RS21490 PF04002 RadC-like JAB domain CH60_RS21495 PF00830 Ribosomal L28 family CH60_RS21500 PF00471 Ribosomal protein L33 CH60_RS21505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CH60_RS21505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CH60_RS21505 PF06827 Zinc finger found in FPG and IleRS CH60_RS21510 PF01467 Cytidylyltransferase-like CH60_RS21515 PF00535 Glycosyl transferase family 2 CH60_RS21520 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CH60_RS21525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH60_RS21530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH60_RS21535 PF01370 NAD dependent epimerase/dehydratase family CH60_RS21540 PF00155 Aminotransferase class I and II CH60_RS21545 PF08240 Alcohol dehydrogenase GroES-like domain CH60_RS21545 PF00107 Zinc-binding dehydrogenase CH60_RS21555 PF01551 Peptidase family M23 CH60_RS21560 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CH60_RS21560 PF01676 Metalloenzyme superfamily CH60_RS21565 PF00581 Rhodanese-like domain CH60_RS21570 PF00462 Glutaredoxin CH60_RS21575 PF02556 Preprotein translocase subunit SecB CH60_RS21580 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CH60_RS21580 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CH60_RS21590 PF00132 Bacterial transferase hexapeptide (six repeats) CH60_RS21590 PF06426 Serine acetyltransferase, N-terminal CH60_RS21595 PF00588 SpoU rRNA Methylase family CH60_RS21600 PF12833 Helix-turn-helix domain CH60_RS21600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH60_RS21600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH60_RS21600 PF02805 Metal binding domain of Ada CH60_RS21605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH60_RS21605 PF16527 Two-component sensor protein CpxA, periplasmic domain CH60_RS21605 PF00672 HAMP domain CH60_RS21605 PF00512 His Kinase A (phospho-acceptor) domain CH60_RS21610 PF00486 Transcriptional regulatory protein, C terminal CH60_RS21610 PF00072 Response regulator receiver domain CH60_RS21615 PF07813 LTXXQ motif family protein CH60_RS21620 PF04754 Putative transposase, YhgA-like CH60_RS21625 PF16916 Dimerisation domain of Zinc Transporter CH60_RS21625 PF01545 Cation efflux family CH60_RS21630 PF00365 Phosphofructokinase CH60_RS21645 PF00939 Sodium:sulfate symporter transmembrane region CH60_RS21650 PF03737 Aldolase/RraA CH60_RS21655 PF02585 GlcNAc-PI de-N-acetylase CH60_RS21660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH60_RS21660 PF03466 LysR substrate binding domain CH60_RS21665 PF00121 Triosephosphate isomerase CH60_RS21670 PF07305 Protein of unknown function (DUF1454) CH60_RS21675 PF05656 Protein of unknown function (DUF805) CH60_RS21680 PF00175 Oxidoreductase NAD-binding domain CH60_RS21680 PF00970 Oxidoreductase FAD-binding domain CH60_RS21685 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CH60_RS21690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS21690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS21695 PF00230 Major intrinsic protein CH60_RS21705 PF06005 Cell division protein ZapB CH60_RS21715 PF00664 ABC transporter transmembrane region CH60_RS21715 PF00005 ABC transporter CH60_RS21715 PF03412 Peptidase C39 family CH60_RS21720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH60_RS21720 PF00529 HlyD membrane-fusion protein of T1SS CH60_RS21740 PF03737 Aldolase/RraA CH60_RS21745 PF01040 UbiA prenyltransferase family CH60_RS21750 PF00004 ATPase family associated with various cellular activities (AAA) CH60_RS21750 PF07724 AAA domain (Cdc48 subfamily) CH60_RS21750 PF10431 C-terminal, D2-small domain, of ClpB protein CH60_RS21755 PF00227 Proteasome subunit CH60_RS21760 PF05036 Sporulation related domain CH60_RS21765 PF00356 Bacterial regulatory proteins, lacI family CH60_RS21775 PF17764 3′ DNA-binding domain (3′BD) CH60_RS21775 PF00270 DEAD/DEAH box helicase CH60_RS21775 PF18074 Primosomal protein N C-terminal domain CH60_RS21775 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CH60_RS21775 PF00271 Helicase conserved C-terminal domain CH60_RS21780 PF01197 Ribosomal protein L31 CH60_RS21785 PF05360 yiaA/B two helix domain CH60_RS21795 PF01340 Met Apo-repressor, MetJ CH60_RS21800 PF01053 Cys/Met metabolism PLP-dependent enzyme CH60_RS21805 PF03447 Homoserine dehydrogenase, NAD binding domain CH60_RS21805 PF00742 Homoserine dehydrogenase CH60_RS21805 PF00696 Amino acid kinase family CH60_RS21810 PF02219 Methylenetetrahydrofolate reductase CH60_RS21815 PF13333 Integrase core domain CH60_RS21815 PF00665 Integrase core domain CH60_RS21815 PF13276 HTH-like domain CH60_RS21820 PF13276 HTH-like domain CH60_RS21820 PF00665 Integrase core domain CH60_RS21820 PF13333 Integrase core domain CH60_RS21835 PF01757 Acyltransferase family CH60_RS21840 PF00419 Fimbrial protein CH60_RS21855 PF02753 Pili assembly chaperone PapD, C-terminal domain CH60_RS21855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH60_RS21865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH60_RS21865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH60_RS21875 PF13407 Periplasmic binding protein domain CH60_RS21880 PF00005 ABC transporter CH60_RS21885 PF02653 Branched-chain amino acid transport system / permease component CH60_RS21890 PF12833 Helix-turn-helix domain CH60_RS21895 PF00589 Phage integrase family CH60_RS21895 PF13356 Arm DNA-binding domain CH60_RS21895 PF14659 Phage integrase, N-terminal SAM-like domain CH60_RS21905 PF04606 Ogr/Delta-like zinc finger CH60_RS21910 PF13737 Transposase DDE domain CH60_RS21915 PF13737 Transposase DDE domain CH60_RS21935 PF00005 ABC transporter CH60_RS21940 PF01032 FecCD transport family CH60_RS21945 PF01032 FecCD transport family CH60_RS21950 PF01497 Periplasmic binding protein CH60_RS21965 PF00156 Phosphoribosyl transferase domain CH60_RS21970 PF00291 Pyridoxal-phosphate dependent enzyme CH60_RS21975 PF17391 Urocanase N-terminal domain CH60_RS21975 PF17392 Urocanase C-terminal domain CH60_RS21975 PF01175 Urocanase Rossmann-like domain CH60_RS21980 PF00221 Aromatic amino acid lyase CH60_RS21985 PF00665 Integrase core domain CH60_RS21985 PF02796 Helix-turn-helix domain of resolvase CH60_RS21990 PF01695 IstB-like ATP binding protein CH60_RS21995 PF01026 TatD related DNase CH60_RS22000 PF00490 Delta-aminolevulinic acid dehydratase CH60_RS22005 PF02357 Transcription termination factor nusG CH60_RS22010 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CH60_RS22015 PF00175 Oxidoreductase NAD-binding domain CH60_RS22015 PF00970 Oxidoreductase FAD-binding domain CH60_RS22020 PF02803 Thiolase, C-terminal domain CH60_RS22020 PF00108 Thiolase, N-terminal domain CH60_RS22025 PF00378 Enoyl-CoA hydratase/isomerase CH60_RS22025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH60_RS22025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH60_RS22030 PF00557 Metallopeptidase family M24 CH60_RS22035 PF09186 Domain of unknown function (DUF1949) CH60_RS22035 PF01205 Uncharacterized protein family UPF0029 CH60_RS22040 PF02386 Cation transport protein CH60_RS22045 PF12724 Flavodoxin domain CH60_RS22075 PF01565 FAD binding domain CH60_RS22075 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CH60_RS22080 PF02237 Biotin protein ligase C terminal domain CH60_RS22080 PF03099 Biotin/lipoate A/B protein ligase family CH60_RS22080 PF08279 HTH domain CH60_RS22085 PF00485 Phosphoribulokinase / Uridine kinase family CH60_RS22090 PF13673 Acetyltransferase (GNAT) domain CH60_RS22095 PF02796 Helix-turn-helix domain of resolvase CH60_RS22095 PF00665 Integrase core domain CH60_RS22100 PF01695 IstB-like ATP binding protein CH60_RS22105 PF00665 Integrase core domain CH60_RS22105 PF13333 Integrase core domain CH60_RS22105 PF13276 HTH-like domain CH60_RS22125 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CH60_RS22125 PF01266 FAD dependent oxidoreductase CH60_RS22130 PF00343 Carbohydrate phosphorylase CH60_RS22135 PF08323 Starch synthase catalytic domain CH60_RS22135 PF00534 Glycosyl transferases group 1 CH60_RS22140 PF00483 Nucleotidyl transferase CH60_RS22145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH60_RS22145 PF18390 Glycogen debranching enzyme C-terminal domain CH60_RS22145 PF00128 Alpha amylase, catalytic domain CH60_RS22150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH60_RS22150 PF02806 Alpha amylase, C-terminal all-beta domain CH60_RS22150 PF00128 Alpha amylase, catalytic domain CH60_RS22155 PF07694 5TMR of 5TMR-LYT CH60_RS22155 PF06580 Histidine kinase CH60_RS22160 PF09134 Invasin, domain 3 CH60_RS22160 PF07979 Intimin C-type lectin domain CH60_RS22160 PF11924 Inverse autotransporter, beta-domain CH60_RS22160 PF02369 Bacterial Ig-like domain (group 1) CH60_RS22185 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH60_RS22185 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH60_RS22190 PF01914 MarC family integral membrane protein CH60_RS22210 PF01202 Shikimate kinase CH60_RS22215 PF02447 GntP family permease CH60_RS22220 PF00356 Bacterial regulatory proteins, lacI family CH60_RS22220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH60_RS22245 PF13276 HTH-like domain CH60_RS22245 PF13683 Integrase core domain