locus-tag	class	description
DJY80_RS00010	COG0592	DNA-directed DNA polymerase activity
DJY80_RS00020	COG0187	DNA topoisomerase II activity
DJY80_RS00025	COG0561	phosphatase activity
DJY80_RS00045	COG2423	ornithine cyclodeaminase activity
DJY80_RS00050	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DJY80_RS00065	COG5645	(Lipo)protein
DJY80_RS00085	COG3977	Valine--pyruvate aminotransferase
DJY80_RS00105	COG0366	Alpha amylase catalytic
DJY80_RS00125	COG2885	chlorophyll binding
DJY80_RS00135	COG2818	Glycosylase
DJY80_RS00160	COG2213	PTS system mannitol-specific
DJY80_RS00160	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJY80_RS00170	COG3722	fumarate hydratase activity
DJY80_RS00195	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DJY80_RS00210	COG0437	4 iron, 4 sulfur cluster binding
DJY80_RS00215	COG2864	formate dehydrogenase
DJY80_RS00230	COG3276	selenocysteine insertion sequence binding
DJY80_RS00335	COG3501	Rhs element vgr protein
DJY80_RS00380	COG3501	Rhs element vgr protein
DJY80_RS00415	COG0673	inositol 2-dehydrogenase activity
DJY80_RS00420	COG1917	Cupin 2, conserved barrel domain protein
DJY80_RS00420	COG2207	Transcriptional regulator
DJY80_RS00425	COG1869	D-ribose catabolic process
DJY80_RS00430	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJY80_RS00435	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DJY80_RS00440	COG0431	NADPH-dependent FMN reductase
DJY80_RS00445	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DJY80_RS00455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJY80_RS00470	COG3077	Addiction module antitoxin, RelB DinJ family
DJY80_RS00475	COG2252	PERMEase
DJY80_RS00480	COG0025	NhaP-type Na H and K H
DJY80_RS00490	COG1560	Kdo2-lipid A biosynthetic process
DJY80_RS00500	COG1129	ABC transporter
DJY80_RS00505	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS00515	COG1069	ribulokinase activity
DJY80_RS00525	COG0625	glutathione transferase activity
DJY80_RS00545	COG1278	Cold shock
DJY80_RS00550	COG1278	Cold shock
DJY80_RS00560	COG3133	Outer membrane lipoprotein
DJY80_RS00565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJY80_RS00575	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DJY80_RS00605	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DJY80_RS00610	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJY80_RS00620	COG4145	pantothenate transmembrane transporter activity
DJY80_RS00625	COG3924	membrane
DJY80_RS00630	COG0439	Biotin carboxylase
DJY80_RS00635	COG0511	ligase activity, forming carbon-carbon bonds
DJY80_RS00650	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DJY80_RS00655	COG0604	alcohol dehydrogenase
DJY80_RS00660	COG2199	diguanylate cyclase activity
DJY80_RS00660	COG2200	EAL domain
DJY80_RS00665	COG1077	Cell shape determining protein MreB Mrl
DJY80_RS00670	COG1792	Involved in formation and maintenance of cell shape
DJY80_RS00675	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DJY80_RS00680	COG0424	maF-like protein
DJY80_RS00685	COG1530	ribonuclease E activity
DJY80_RS00690	COG3164	Protein of unknown function
DJY80_RS00695	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DJY80_RS00700	COG0312	modulator of DNA gyrase
DJY80_RS00770	COG0583	DNA-binding transcription factor activity
DJY80_RS00800	COG2732	(Barnase) inhibitor
DJY80_RS00810	COG0312	modulator of DNA gyrase
DJY80_RS00820	COG3783	Cytochrome b(562)
DJY80_RS00825	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DJY80_RS00830	COG0366	Alpha amylase catalytic
DJY80_RS00835	COG1263	PTS System
DJY80_RS00835	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJY80_RS00840	COG1609	Transcriptional regulator
DJY80_RS00870	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJY80_RS00895	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DJY80_RS00900	COG1137	ATPase activity
DJY80_RS00905	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DJY80_RS00910	COG3117	lipopolysaccharide transmembrane transporter activity
DJY80_RS00915	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DJY80_RS00920	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DJY80_RS00920	COG0517	IMP dehydrogenase activity
DJY80_RS00925	COG0530	calcium, potassium:sodium antiporter activity
DJY80_RS00930	COG1127	ABC transporter
DJY80_RS00935	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DJY80_RS00940	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DJY80_RS00945	COG2854	intermembrane phospholipid transfer
DJY80_RS00950	COG3113	response to antibiotic
DJY80_RS00955	COG5007	Belongs to the BolA IbaG family
DJY80_RS00965	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJY80_RS00975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJY80_RS00980	COG3105	Protein conserved in bacteria
DJY80_RS00985	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DJY80_RS01005	COG0625	glutathione transferase activity
DJY80_RS01010	COG2969	positive regulation of protein catabolic process
DJY80_RS01020	COG0493	'glutamate synthase
DJY80_RS01025	COG0067	glutamate synthase
DJY80_RS01025	COG0070	glutamate synthase
DJY80_RS01025	COG0069	glutamate synthase activity
DJY80_RS01030	COG1242	4 iron, 4 sulfur cluster binding
DJY80_RS01040	COG0784	Response regulator, receiver
DJY80_RS01040	COG5002	protein histidine kinase activity
DJY80_RS01040	COG2198	Histidine kinase
DJY80_RS01050	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DJY80_RS01060	COG2823	Periplasmic or secreted lipoprotein
DJY80_RS01080	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DJY80_RS01090	COG1741	Belongs to the pirin family
DJY80_RS01095	COG0583	DNA-binding transcription factor activity
DJY80_RS01155	COG1879	ABC-type sugar transport system periplasmic component
DJY80_RS01160	COG1129	ABC transporter
DJY80_RS01165	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS01170	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS01180	COG3085	chromosome segregation
DJY80_RS01205	COG3978	acetolactate synthase activity
DJY80_RS01210	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJY80_RS01250	COG0583	DNA-binding transcription factor activity
DJY80_RS01290	COG3121	Chaperone
DJY80_RS01305	COG3121	Chaperone
DJY80_RS01320	COG3328	transposase activity
DJY80_RS01330	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DJY80_RS01355	COG3118	belongs to the thioredoxin family
DJY80_RS01360	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DJY80_RS01365	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DJY80_RS01370	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DJY80_RS01375	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DJY80_RS01380	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DJY80_RS01385	COG1088	dTDP-glucose 4,6-dehydratase activity
DJY80_RS01390	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DJY80_RS01395	COG0456	acetyltransferase
DJY80_RS01400	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DJY80_RS01405	COG2244	polysaccharide biosynthetic process
DJY80_RS01425	COG1113	amino acid transport
DJY80_RS01460	COG3071	HemY protein
DJY80_RS01465	COG2959	enzyme of heme biosynthesis
DJY80_RS01470	COG1587	Uroporphyrinogen-III synthase
DJY80_RS01485	COG3072	Adenylate cyclase
DJY80_RS01505	COG3159	Protein conserved in bacteria
DJY80_RS01510	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DJY80_RS01515	COG1011	Hydrolase
DJY80_RS01520	COG0210	DNA helicase
DJY80_RS01530	COG5441	Belongs to the UPF0261 family
DJY80_RS01535	COG5564	TIM-barrel signal transduction protein
DJY80_RS01550	COG2050	protein possibly involved in aromatic compounds catabolism
DJY80_RS01555	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
DJY80_RS01560	COG0514	ATP-dependent DNA helicase (RecQ)
DJY80_RS01565	COG1280	lysine exporter protein (LysE YggA)
DJY80_RS01570	COG1280	lysine exporter protein (LysE YggA)
DJY80_RS01575	COG2267	carboxylic ester hydrolase activity
DJY80_RS01580	COG0561	phosphatase activity
DJY80_RS01590	COG0584	glycerophosphoryl diester phosphodiesterase
DJY80_RS01605	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DJY80_RS01615	COG0247	lactate metabolic process
DJY80_RS01625	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DJY80_RS01640	COG3714	YhhN family
DJY80_RS01655	COG3776	membrane
DJY80_RS01660	COG0742	ribosomal rna small subunit methyltransferase
DJY80_RS01670	COG0552	protein localization to endoplasmic reticulum
DJY80_RS01670	COG0552	protein localization to endoplasmic reticulum
DJY80_RS01675	COG2884	Cell division ATP-binding protein ftsE
DJY80_RS01680	COG2177	Part of the ABC transporter FtsEX involved in
DJY80_RS01700	COG0683	leucine binding
DJY80_RS01710	COG4177	L-phenylalanine transmembrane transporter activity
DJY80_RS01720	COG0410	ABC transporter
DJY80_RS01780	COG0584	glycerophosphoryl diester phosphodiesterase
DJY80_RS01785	COG0679	Auxin Efflux Carrier
DJY80_RS01790	COG0697	spore germination
DJY80_RS01795	COG0583	DNA-binding transcription factor activity
DJY80_RS01805	COG0412	Dienelactone hydrolase
DJY80_RS01820	COG1966	Carbon starvation protein
DJY80_RS01825	COG0586	Pfam SNARE associated Golgi protein
DJY80_RS01830	COG1322	Protein conserved in bacteria
DJY80_RS01850	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DJY80_RS01860	COG0805	protein transport
DJY80_RS01895	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DJY80_RS01935	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DJY80_RS01940	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
DJY80_RS01975	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DJY80_RS02035	COG0250	Participates in transcription elongation, termination and antitermination
DJY80_RS02095	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DJY80_RS02130	COG1515	deoxyribonuclease V activity
DJY80_RS02150	COG0151	Belongs to the GarS family
DJY80_RS02225	COG3162	membrane
DJY80_RS02235	COG1301	dicarboxylic acid transport
DJY80_RS02345	COG2391	methyltransferase activity
DJY80_RS02350	COG0425	Belongs to the sulfur carrier protein TusA family
DJY80_RS02355	COG0583	DNA-binding transcription factor activity
DJY80_RS02360	COG0814	amino acid
DJY80_RS02365	COG0626	cystathionine gamma-synthase activity
DJY80_RS02375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJY80_RS02380	COG4558	Periplasmic binding protein
DJY80_RS02385	COG3720	iron ion transport
DJY80_RS02390	COG4771	TonB-dependent receptor
DJY80_RS02400	COG0702	epimerase
DJY80_RS02405	COG3721	Heme iron utilization protein
DJY80_RS02430	COG1358	cellular component organization or biogenesis
DJY80_RS02490	COG3121	Chaperone
DJY80_RS02545	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DJY80_RS02555	COG0735	belongs to the Fur family
DJY80_RS02560	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJY80_RS02585	COG1448	Aminotransferase
DJY80_RS02590	COG2315	Protein conserved in bacteria
DJY80_RS02595	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DJY80_RS02600	COG0629	single-stranded DNA binding
DJY80_RS02610	COG1454	alcohol dehydrogenase
DJY80_RS02680	COG1309	transcriptional regulator
DJY80_RS02690	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJY80_RS02690	COG0493	'glutamate synthase
DJY80_RS02695	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJY80_RS02700	COG3383	formate dehydrogenase (NAD+) activity
DJY80_RS02715	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DJY80_RS02765	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
DJY80_RS02775	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DJY80_RS02780	COG1053	succinate dehydrogenase
DJY80_RS02795	COG1511	domain protein
DJY80_RS02795	COG3264	Mechanosensitive ion channel
DJY80_RS02815	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DJY80_RS02835	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DJY80_RS02840	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DJY80_RS02840	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DJY80_RS02845	COG0802	atpase or kinase
DJY80_RS02850	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJY80_RS02870	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DJY80_RS02875	COG0330	HflC and HflK could
DJY80_RS02880	COG0330	HflC and HflK could
DJY80_RS02885	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DJY80_RS02900	COG0557	exoribonuclease II activity
DJY80_RS02905	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJY80_RS02910	COG1960	acyl-CoA dehydrogenase activity
DJY80_RS02915	COG3650	response to hydrogen peroxide
DJY80_RS02935	COG1073	alpha beta
DJY80_RS02945	COG0360	Binds together with S18 to 16S ribosomal RNA
DJY80_RS02955	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DJY80_RS02975	COG3061	Opacity-associated protein A
DJY80_RS02980	COG0545	Peptidyl-prolyl cis-trans isomerase
DJY80_RS02990	COG0737	Belongs to the 5'-nucleotidase family
DJY80_RS03000	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DJY80_RS03010	COG1253	flavin adenine dinucleotide binding
DJY80_RS03020	COG0729	surface antigen
DJY80_RS03025	COG2911	Protein conserved in bacteria
DJY80_RS03030	COG2105	PFAM AIG2 family protein
DJY80_RS03035	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DJY80_RS03040	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
DJY80_RS03045	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DJY80_RS03070	COG3423	Transcriptional regulator
DJY80_RS03080	COG0142	geranyltranstransferase activity
DJY80_RS03095	COG0697	spore germination
DJY80_RS03105	COG0642	Histidine kinase
DJY80_RS03110	COG0745	RESPONSE REGULATOR receiver
DJY80_RS03115	COG2027	D-alanyl-D-alanine carboxypeptidase
DJY80_RS03125	COG1534	Rna-binding protein
DJY80_RS03140	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DJY80_RS03150	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DJY80_RS03170	COG0195	Participates in both transcription termination and antitermination
DJY80_RS03215	COG0513	Belongs to the DEAD box helicase family
DJY80_RS03240	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DJY80_RS03250	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJY80_RS03260	COG0826	peptidase U32
DJY80_RS03265	COG0826	peptidase U32
DJY80_RS03275	COG3154	lipid carrier protein
DJY80_RS03280	COG3153	acetyltransferase
DJY80_RS03300	COG1653	transport
DJY80_RS03305	COG1175	transmembrane transport
DJY80_RS03310	COG0395	ABC-type sugar transport system, permease component
DJY80_RS03315	COG3842	ATPase activity
DJY80_RS03330	COG0702	epimerase
DJY80_RS03335	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DJY80_RS03340	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
DJY80_RS03345	COG3454	Phosphonate metabolism
DJY80_RS03350	COG4778	phosphonate C-P lyase system protein PhnL
DJY80_RS03355	COG4107	phosphonate C-P lyase system protein PhnK
DJY80_RS03360	COG3627	carbon phosphorus lyase activity
DJY80_RS03365	COG3626	phosphonate metabolism
DJY80_RS03370	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
DJY80_RS03375	COG3624	Phosphonate C-P lyase system protein PhnG
DJY80_RS03380	COG2188	Transcriptional regulator
DJY80_RS03395	COG4608	Belongs to the ABC transporter superfamily
DJY80_RS03400	COG0444	Belongs to the ABC transporter superfamily
DJY80_RS03405	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJY80_RS03410	COG0601	transmembrane transport
DJY80_RS03420	COG2731	YhcH YjgK YiaL family protein
DJY80_RS03430	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
DJY80_RS03440	COG0525	valine-tRNA ligase activity
DJY80_RS03445	COG2927	DNA polymerase III (CHI subunit)
DJY80_RS03455	COG0795	lipopolysaccharide-transporting ATPase activity
DJY80_RS03460	COG0795	lipopolysaccharide-transporting ATPase activity
DJY80_RS03470	COG0582	viral genome integration into host DNA
DJY80_RS03525	COG1459	type II secretion system
DJY80_RS03530	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DJY80_RS03535	COG4969	Belongs to the N-Me-Phe pilin family
DJY80_RS03545	COG3023	N-Acetylmuramoyl-L-alanine amidase
DJY80_RS03550	COG3725	Membrane protein required for beta-lactamase induction
DJY80_RS03555	COG1113	amino acid transport
DJY80_RS03565	COG2186	Transcriptional regulator
DJY80_RS03570	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DJY80_RS03575	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJY80_RS03580	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJY80_RS03590	COG1049	propionate catabolic process, 2-methylcitrate cycle
DJY80_RS03600	COG0697	spore germination
DJY80_RS03620	COG2132	Multicopper oxidase
DJY80_RS03625	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DJY80_RS03630	COG0288	reversible hydration of carbon dioxide
DJY80_RS03635	COG1131	(ABC) transporter
DJY80_RS03640	COG0842	Transport permease protein
DJY80_RS03665	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DJY80_RS03670	COG0617	tRNA 3'-terminal CCA addition
DJY80_RS03675	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DJY80_RS03695	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DJY80_RS03700	COG1643	Atp-dependent helicase
DJY80_RS03705	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DJY80_RS03710	COG1120	ATPase activity
DJY80_RS03715	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJY80_RS03720	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJY80_RS03740	COG2860	membrane
DJY80_RS03760	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJY80_RS03765	COG3850	Histidine kinase
DJY80_RS03765	COG2205	protein histidine kinase activity
DJY80_RS03765	COG3437	response regulator, receiver
DJY80_RS03765	COG4999	Histidine kinase
DJY80_RS03775	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DJY80_RS03780	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DJY80_RS03785	COG3956	TIGRFAM MazG family protein
DJY80_RS03805	COG0602	queuosine metabolic process
DJY80_RS03810	COG0720	synthase
DJY80_RS03865	COG0529	Catalyzes the synthesis of activated sulfate
DJY80_RS03905	COG1388	LysM domain
DJY80_RS03905	COG4942	peptidase
DJY80_RS03910	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DJY80_RS03920	COG0698	ribose 5-phosphate isomerase
DJY80_RS03925	COG1063	alcohol dehydrogenase
DJY80_RS03930	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS03935	COG2376	Dihydroxyacetone kinase
DJY80_RS03950	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DJY80_RS03970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJY80_RS03975	COG1858	cytochrome C peroxidase
DJY80_RS03985	COG4771	TonB-dependent receptor
DJY80_RS03995	COG0024	Methionine aminopeptidase
DJY80_RS04005	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DJY80_RS04005	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DJY80_RS04010	COG1070	Carbohydrate kinase
DJY80_RS04015	COG3623	hexulose-6-phosphate isomerase
DJY80_RS04020	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS04025	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS04030	COG1129	ABC transporter
DJY80_RS04040	COG0077	Prephenate dehydratase
DJY80_RS04040	COG1605	Chorismate mutase
DJY80_RS04045	COG1605	Chorismate mutase
DJY80_RS04045	COG0287	Prephenate dehydrogenase
DJY80_RS04050	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DJY80_RS04055	COG3279	Response regulator of the LytR AlgR family
DJY80_RS04065	COG3137	Salt-induced outer membrane protein
DJY80_RS04110	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DJY80_RS04115	COG4137	Cytochrome C assembly protein
DJY80_RS04120	COG4536	flavin adenine dinucleotide binding
DJY80_RS04135	COG2918	glutathione biosynthetic process
DJY80_RS04140	COG1238	metal cluster binding
DJY80_RS04145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJY80_RS04175	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DJY80_RS04220	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DJY80_RS04225	COG3958	Transketolase
DJY80_RS04230	COG3959	Transketolase, thiamine diphosphate binding domain
DJY80_RS04235	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS04240	COG1129	ABC transporter
DJY80_RS04250	COG1879	ABC-type sugar transport system periplasmic component
DJY80_RS04260	COG3783	Cytochrome b(562)
DJY80_RS04265	COG3038	cytochrome b561
DJY80_RS04270	COG3381	protein complex oligomerization
DJY80_RS04275	COG3302	dmso reductase anchor subunit
DJY80_RS04280	COG0437	4 iron, 4 sulfur cluster binding
DJY80_RS04285	COG0243	molybdopterin cofactor binding
DJY80_RS04290	COG0235	Class ii aldolase
DJY80_RS04295	COG1349	DNA-binding transcription factor activity
DJY80_RS04310	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DJY80_RS04315	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DJY80_RS04325	COG0564	pseudouridine synthase activity
DJY80_RS04335	COG0542	response to heat
DJY80_RS04375	COG5544	Lipoprotein
DJY80_RS04380	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJY80_RS04385	COG0045	succinate-CoA ligase (ADP-forming) activity
DJY80_RS04385	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJY80_RS04385	COG1042	CoA-binding domain protein
DJY80_RS04390	COG3148	PFAM DTW domain containing protein
DJY80_RS04395	COG3118	belongs to the thioredoxin family
DJY80_RS04400	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJY80_RS04405	COG2814	Major facilitator Superfamily
DJY80_RS04410	COG1566	PFAM secretion protein HlyD family protein
DJY80_RS04415	COG1846	Transcriptional regulator
DJY80_RS04425	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DJY80_RS04430	COG2814	Major facilitator Superfamily
DJY80_RS04470	COG0765	amino acid transport
DJY80_RS04480	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DJY80_RS04495	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DJY80_RS04520	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
DJY80_RS04530	COG1960	acyl-CoA dehydrogenase activity
DJY80_RS04540	COG0121	glutamine amidotransferase
DJY80_RS04545	COG3034	peptidoglycan biosynthetic process
DJY80_RS04560	COG1805	sodium ion transport
DJY80_RS04565	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
DJY80_RS04585	COG1477	protein flavinylation
DJY80_RS04605	COG2195	Cleaves the N-terminal amino acid of tripeptides
DJY80_RS04610	COG0583	DNA-binding transcription factor activity
DJY80_RS04670	COG2226	methyltransferase
DJY80_RS04700	COG1940	carbohydrate kinase activity
DJY80_RS04705	COG0419	ATPase involved in DNA repair
DJY80_RS04710	COG0420	3'-5' exonuclease activity
DJY80_RS04715	COG0745	RESPONSE REGULATOR receiver
DJY80_RS04720	COG5002	protein histidine kinase activity
DJY80_RS04740	COG0366	Alpha amylase catalytic
DJY80_RS04765	COG0450	alkyl hydroperoxide reductase
DJY80_RS04785	COG1862	Preprotein translocase
DJY80_RS04790	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DJY80_RS04795	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DJY80_RS04825	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DJY80_RS04825	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DJY80_RS04840	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DJY80_RS04845	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DJY80_RS04860	COG0142	geranyltranstransferase activity
DJY80_RS04875	COG0693	protein deglycase activity
DJY80_RS04880	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DJY80_RS04895	COG2814	Major facilitator Superfamily
DJY80_RS04905	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DJY80_RS04910	COG1845	cytochrome c oxidase, subunit III
DJY80_RS04915	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DJY80_RS04920	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DJY80_RS04930	COG2223	nitrite transmembrane transporter activity
DJY80_RS04935	COG3056	Lipoprotein
DJY80_RS04940	COG0271	Belongs to the BolA IbaG family
DJY80_RS04965	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DJY80_RS04970	COG0776	regulation of translation
DJY80_RS04980	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DJY80_RS04985	COG1555	photosystem II stabilization
DJY80_RS04990	COG0824	Thioesterase
DJY80_RS05000	COG4533	DNA binding
DJY80_RS05015	COG1522	sequence-specific DNA binding
DJY80_RS05020	COG1132	(ABC) transporter
DJY80_RS05025	COG1132	(ABC) transporter
DJY80_RS05030	COG0347	Belongs to the P(II) protein family
DJY80_RS05035	COG0004	ammonium transporteR
DJY80_RS05040	COG1946	Acyl-CoA thioesterase
DJY80_RS05045	COG3126	Type III secretion system lipoprotein chaperone (YscW)
DJY80_RS05050	COG3695	enzyme binding
DJY80_RS05075	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DJY80_RS05085	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJY80_RS05090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJY80_RS05095	COG1309	transcriptional regulator
DJY80_RS05100	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DJY80_RS05105	COG3264	Mechanosensitive ion channel
DJY80_RS05105	COG1196	nuclear chromosome segregation
DJY80_RS05120	COG2832	Protein of unknown function (DUF454)
DJY80_RS05130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DJY80_RS05160	COG0543	2 iron, 2 sulfur cluster binding
DJY80_RS05160	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJY80_RS05185	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJY80_RS05230	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJY80_RS05250	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DJY80_RS05255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJY80_RS05260	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DJY80_RS05260	COG4651	solute:proton antiporter activity
DJY80_RS05265	COG2223	nitrite transmembrane transporter activity
DJY80_RS05280	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DJY80_RS05285	COG3735	TraB family
DJY80_RS05290	COG2217	Heavy metal translocating P-type atpase
DJY80_RS05295	COG0789	Transcriptional regulator
DJY80_RS05300	COG1585	Membrane protein implicated in regulation of membrane protease activity
DJY80_RS05305	COG0330	HflC and HflK could
DJY80_RS05310	COG3118	belongs to the thioredoxin family
DJY80_RS05315	COG0300	oxidoreductase activity
DJY80_RS05320	COG2755	lipolytic protein G-D-S-L family
DJY80_RS05325	COG4181	ATPase activity
DJY80_RS05330	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DJY80_RS05335	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DJY80_RS05340	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DJY80_RS05355	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DJY80_RS05370	COG2501	S4 domain
DJY80_RS05405	COG0582	viral genome integration into host DNA
DJY80_RS05420	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DJY80_RS05425	COG4589	Belongs to the CDS family
DJY80_RS05435	COG2267	carboxylic ester hydrolase activity
DJY80_RS05440	COG2453	phosphatase
DJY80_RS05440	COG0671	phosphoesterase, PA-phosphatase related
DJY80_RS05475	COG0667	Aldo Keto reductase
DJY80_RS05480	COG0656	L-ascorbic acid biosynthetic process
DJY80_RS05490	COG1472	Belongs to the glycosyl hydrolase 3 family
DJY80_RS05505	COG3328	transposase activity
DJY80_RS05560	COG3423	Transcriptional regulator
DJY80_RS05565	COG4953	penicillin-binding protein 1C
DJY80_RS05575	COG2373	Large extracellular alpha-helical protein
DJY80_RS05595	COG3962	Belongs to the TPP enzyme family
DJY80_RS05610	COG1129	ABC transporter
DJY80_RS05615	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS05620	COG0673	inositol 2-dehydrogenase activity
DJY80_RS05625	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJY80_RS05635	COG3718	enzyme involved in inositol metabolism
DJY80_RS05645	COG5265	(ABC) transporter
DJY80_RS05670	COG2197	response regulator
DJY80_RS05675	COG1278	Cold shock
DJY80_RS05685	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DJY80_RS05690	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DJY80_RS05715	COG1686	Belongs to the peptidase S11 family
DJY80_RS05720	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DJY80_RS05725	COG0772	Belongs to the SEDS family
DJY80_RS05730	COG0768	penicillin binding
DJY80_RS05740	COG0799	negative regulation of ribosome biogenesis
DJY80_RS05750	COG1466	dna polymerase III delta subunit
DJY80_RS05765	COG2888	peptidyl-tyrosine sulfation
DJY80_RS05770	COG1126	abc transporter atp-binding protein
DJY80_RS05775	COG0765	amino acid transport
DJY80_RS05780	COG0765	amino acid transport
DJY80_RS05790	COG0815	Transfers the fatty acyl group on membrane lipoproteins
DJY80_RS05795	COG4535	Mg2 and Co2 transporter CorC
DJY80_RS05805	COG1702	phosphate starvation-inducible protein PhoH
DJY80_RS05810	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DJY80_RS05815	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJY80_RS05855	COG0367	asparagine synthase
DJY80_RS05860	COG0647	UMP catabolic process
DJY80_RS05865	COG1940	carbohydrate kinase activity
DJY80_RS05865	COG1846	Transcriptional regulator
DJY80_RS05870	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DJY80_RS05880	COG1263	PTS System
DJY80_RS05880	COG2190	(PTS) system
DJY80_RS05880	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJY80_RS05910	COG0735	belongs to the Fur family
DJY80_RS05930	COG0596	Alpha beta hydrolase
DJY80_RS05940	COG0582	viral genome integration into host DNA
DJY80_RS05970	COG2113	Glycine betaine
DJY80_RS05975	COG4176	ABC-type proline glycine betaine transport system permease component
DJY80_RS05980	COG4175	Glycine betaine
DJY80_RS05985	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DJY80_RS06025	COG1278	Cold shock
DJY80_RS06030	COG0747	negative chemotaxis
DJY80_RS06040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJY80_RS06045	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
DJY80_RS06050	COG1124	(ABC) transporter
DJY80_RS06055	COG0831	urea catabolic process
DJY80_RS06080	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DJY80_RS06090	COG4413	Urea transporter
DJY80_RS06095	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DJY80_RS06105	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DJY80_RS06115	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DJY80_RS06125	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DJY80_RS06130	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DJY80_RS06135	COG1447	Phosphotransferase system cellobiose-specific component IIA
DJY80_RS06140	COG2169	Transcriptional regulator
DJY80_RS06140	COG1917	Cupin 2, conserved barrel domain protein
DJY80_RS06165	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
DJY80_RS06170	COG0033	Phosphoglucomutase
DJY80_RS06185	COG0745	RESPONSE REGULATOR receiver
DJY80_RS06190	COG2205	protein histidine kinase activity
DJY80_RS06230	COG3272	Protein of unknown function (DUF1722)
DJY80_RS06240	COG5212	phosphodiesterase
DJY80_RS06245	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DJY80_RS06255	COG1984	allophanate hydrolase subunit 2
DJY80_RS06305	COG0513	Belongs to the DEAD box helicase family
DJY80_RS06315	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DJY80_RS06330	COG3026	antisigma factor binding
DJY80_RS06335	COG3086	response to oxidative stress
DJY80_RS06370	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DJY80_RS06385	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJY80_RS06390	COG1737	Transcriptional regulator
DJY80_RS06400	COG0560	Phosphoserine phosphatase
DJY80_RS06450	COG2205	protein histidine kinase activity
DJY80_RS06455	COG3170	Tfp pilus assembly protein FimV
DJY80_RS06460	COG2204	response regulator
DJY80_RS06465	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DJY80_RS06465	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DJY80_RS06470	COG0347	Belongs to the P(II) protein family
DJY80_RS06500	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJY80_RS06500	COG1017	nitric oxide dioxygenase activity
DJY80_RS06520	COG2814	Major facilitator Superfamily
DJY80_RS06525	COG3711	transcriptional antiterminator
DJY80_RS06530	COG3683	transport system, periplasmic component
DJY80_RS06535	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
DJY80_RS06555	COG1104	cysteine desulfurase activity
DJY80_RS06560	COG0822	iron-sulfur transferase activity
DJY80_RS06585	COG0633	Ferredoxin
DJY80_RS06590	COG2975	iron-sulfur cluster assembly
DJY80_RS06615	COG3468	outer membrane autotransporter barrel domain protein
DJY80_RS06620	COG3468	outer membrane autotransporter barrel domain protein
DJY80_RS06665	COG2976	Protein conserved in bacteria
DJY80_RS06670	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DJY80_RS06685	COG1645	bacterial-type flagellum-dependent swarming motility
DJY80_RS06695	COG0517	IMP dehydrogenase activity
DJY80_RS06695	COG0516	GMP reductase activity
DJY80_RS06730	COG3328	transposase activity
DJY80_RS06745	COG0351	phosphomethylpyrimidine kinase
DJY80_RS06770	COG0826	peptidase U32
DJY80_RS06775	COG3422	double-strand break repair
DJY80_RS06780	COG0745	RESPONSE REGULATOR receiver
DJY80_RS06810	COG3842	ATPase activity
DJY80_RS06820	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DJY80_RS06830	COG1176	ABC-type spermidine putrescine transport system, permease component I
DJY80_RS06835	COG1177	transmembrane transport
DJY80_RS06840	COG0443	Heat shock 70 kDa protein
DJY80_RS06845	COG2239	Acts as a magnesium transporter
DJY80_RS06860	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DJY80_RS06870	COG0581	inorganic phosphate transmembrane transporter activity
DJY80_RS06885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJY80_RS06890	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DJY80_RS06915	COG1393	Belongs to the ArsC family
DJY80_RS06920	COG4783	chaperone-mediated protein folding
DJY80_RS06925	COG0628	permease
DJY80_RS06940	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DJY80_RS06945	COG2716	regulation of RNA biosynthetic process
DJY80_RS06955	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DJY80_RS06975	COG2321	neutral zinc metallopeptidase
DJY80_RS07000	COG1876	peptidase activity
DJY80_RS07010	COG1393	Belongs to the ArsC family
DJY80_RS07025	COG1175	transmembrane transport
DJY80_RS07040	COG3119	arylsulfatase activity
DJY80_RS07045	COG0641	radical SAM
DJY80_RS07050	COG1988	membrane-bound metal-dependent
DJY80_RS07060	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJY80_RS07070	COG2197	response regulator
DJY80_RS07075	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJY80_RS07075	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJY80_RS07080	COG3062	negative regulation of establishment of protein localization
DJY80_RS07090	COG3043	anaerobic respiration
DJY80_RS07095	COG3005	denitrification pathway
DJY80_RS07155	COG3111	PFAM Bacterial OB fold (BOF) protein
DJY80_RS07165	COG2837	iron assimilation
DJY80_RS07170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DJY80_RS07180	COG4886	Leucine-rich repeat (LRR) protein
DJY80_RS07190	COG2731	YhcH YjgK YiaL family protein
DJY80_RS07200	COG1737	Transcriptional regulator
DJY80_RS07210	COG4150	thiosulfate binding
DJY80_RS07215	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DJY80_RS07220	COG4208	sulfate ABC transporter
DJY80_RS07225	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DJY80_RS07240	COG0745	RESPONSE REGULATOR receiver
DJY80_RS07245	COG3850	Histidine kinase
DJY80_RS07245	COG5002	protein histidine kinase activity
DJY80_RS07255	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DJY80_RS07275	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DJY80_RS07290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJY80_RS07295	COG0745	RESPONSE REGULATOR receiver
DJY80_RS07300	COG2205	protein histidine kinase activity
DJY80_RS07330	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJY80_RS07340	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
DJY80_RS07355	COG3530	Putative quorum-sensing-regulated virulence factor
DJY80_RS07420	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJY80_RS07435	COG0667	Aldo Keto reductase
DJY80_RS07460	COG0436	Aminotransferase
DJY80_RS07470	COG3038	cytochrome b561
DJY80_RS07500	COG3381	protein complex oligomerization
DJY80_RS07505	COG3302	dmso reductase anchor subunit
DJY80_RS07510	COG0437	4 iron, 4 sulfur cluster binding
DJY80_RS07515	COG0243	molybdopterin cofactor binding
DJY80_RS07610	COG3121	Chaperone
DJY80_RS07615	COG3188	usher protein
DJY80_RS07625	COG3328	transposase activity
DJY80_RS07630	COG3188	usher protein
DJY80_RS07720	COG2824	Alkylphosphonate utilization operon protein PhnA
DJY80_RS07730	COG1704	LemA family
DJY80_RS07750	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJY80_RS07755	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJY80_RS07760	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJY80_RS07770	COG1138	Cytochrome C-type biogenesis protein
DJY80_RS07775	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DJY80_RS07780	COG3088	subunit of a heme lyase
DJY80_RS07780	COG4235	cytochrome complex assembly
DJY80_RS07785	COG3088	subunit of a heme lyase
DJY80_RS07785	COG4235	cytochrome complex assembly
DJY80_RS07800	COG3691	Protein conserved in bacteria
DJY80_RS07815	COG2062	phosphohistidine phosphatase, SixA
DJY80_RS07825	COG2890	protein-(glutamine-N5) methyltransferase activity
DJY80_RS07840	COG0730	response to heat
DJY80_RS07845	COG3101	peptidyl-lysine hydroxylation
DJY80_RS07860	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJY80_RS07865	COG1794	racemase activity, acting on amino acids and derivatives
DJY80_RS07880	COG0697	spore germination
DJY80_RS07895	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DJY80_RS07905	COG0586	Pfam SNARE associated Golgi protein
DJY80_RS07915	COG0285	dihydrofolate synthase activity
DJY80_RS07920	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
DJY80_RS07925	COG1286	toxin biosynthetic process
DJY80_RS07930	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DJY80_RS07940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJY80_RS07945	COG4215	(ABC) transporter
DJY80_RS07950	COG4160	amino acid transport
DJY80_RS07955	COG4598	ABC transporter
DJY80_RS07960	COG1090	epimerase
DJY80_RS07975	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DJY80_RS07980	COG3037	sugar-specific permease SgaT UlaA
DJY80_RS07985	COG3328	transposase activity
DJY80_RS08005	COG1609	Transcriptional regulator
DJY80_RS08010	COG0280	phosphate acetyltransferase
DJY80_RS08010	COG0857	belongs to the CobB CobQ family
DJY80_RS08030	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJY80_RS08035	COG0490	domain, Protein
DJY80_RS08035	COG0471	metal ion transport
DJY80_RS08050	COG0436	Aminotransferase
DJY80_RS08055	COG0583	DNA-binding transcription factor activity
DJY80_RS08065	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJY80_RS08085	COG1034	ATP synthesis coupled electron transport
DJY80_RS08100	COG0839	Belongs to the complex I subunit 6 family
DJY80_RS08110	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DJY80_RS08115	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJY80_RS08135	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS08140	COG3265	gluconokinase activity
DJY80_RS08155	COG1649	PFAM Uncharacterised BCR, COG1649
DJY80_RS08160	COG1609	Transcriptional regulator
DJY80_RS08165	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DJY80_RS08180	COG0129	dihydroxy-acid dehydratase activity
DJY80_RS08195	COG4575	ribosome binding
DJY80_RS08205	COG1169	isochorismate synthase
DJY80_RS08220	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DJY80_RS08235	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DJY80_RS08280	COG1126	abc transporter atp-binding protein
DJY80_RS08285	COG0765	amino acid transport
DJY80_RS08290	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJY80_RS08320	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DJY80_RS08340	COG1063	alcohol dehydrogenase
DJY80_RS08345	COG1879	ABC-type sugar transport system periplasmic component
DJY80_RS08350	COG1129	ABC transporter
DJY80_RS08355	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS08360	COG1609	Transcriptional regulator
DJY80_RS08365	COG0583	DNA-binding transcription factor activity
DJY80_RS08370	COG0473	3-isopropylmalate dehydrogenase activity
DJY80_RS08380	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DJY80_RS08390	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJY80_RS08395	COG2831	hemolysin activation secretion protein
DJY80_RS08420	COG3210	domain, Protein
DJY80_RS08440	COG3210	domain, Protein
DJY80_RS08445	COG3210	domain, Protein
DJY80_RS08455	COG3842	ATPase activity
DJY80_RS08465	COG1609	Transcriptional regulator
DJY80_RS08480	COG0395	ABC-type sugar transport system, permease component
DJY80_RS08485	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
DJY80_RS08505	COG0668	transmembrane transport
DJY80_RS08510	COG1518	maintenance of DNA repeat elements
DJY80_RS08515	COG1203	CRISPR-associated helicase, Cas3
DJY80_RS08540	COG0667	Aldo Keto reductase
DJY80_RS08560	COG0583	DNA-binding transcription factor activity
DJY80_RS08565	COG2771	luxR family
DJY80_RS08570	COG3916	Acyl-homoserine-lactone synthase
DJY80_RS08590	COG0628	permease
DJY80_RS08610	COG3328	transposase activity
DJY80_RS08625	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DJY80_RS08650	COG3328	transposase activity
DJY80_RS08655	COG1530	ribonuclease E activity
DJY80_RS08660	COG0564	pseudouridine synthase activity
DJY80_RS08665	COG0424	maF-like protein
DJY80_RS08670	COG1399	metal-binding, possibly nucleic acid-binding protein
DJY80_RS08675	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DJY80_RS08705	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJY80_RS08715	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJY80_RS08720	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DJY80_RS08730	COG0470	DNA polymerase III
DJY80_RS08735	COG0084	hydrolase, TatD family'
DJY80_RS08740	COG1263	PTS System
DJY80_RS08740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJY80_RS08750	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DJY80_RS08755	COG0537	adenosine 5'-monophosphoramidase activity
DJY80_RS08760	COG5633	Lipoprotein
DJY80_RS08775	COG1472	Belongs to the glycosyl hydrolase 3 family
DJY80_RS08785	COG1252	NADH dehydrogenase
DJY80_RS08805	COG3328	transposase activity
DJY80_RS08815	COG3134	Outer membrane lipoprotein
DJY80_RS08820	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DJY80_RS08825	COG4591	ABC-type transport system involved in lipoprotein release permease component
DJY80_RS08835	COG4591	ABC-type transport system involved in lipoprotein release permease component
DJY80_RS08840	COG1940	carbohydrate kinase activity
DJY80_RS08865	COG2850	peptidyl-arginine hydroxylation
DJY80_RS08875	COG0745	RESPONSE REGULATOR receiver
DJY80_RS08885	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DJY80_RS08905	COG1187	pseudouridine synthase activity
DJY80_RS08910	COG0538	isocitrate dehydrogenase activity
DJY80_RS08925	COG0840	transmembrane signaling receptor activity
DJY80_RS08930	COG0702	epimerase
DJY80_RS08935	COG1733	regulation of RNA biosynthetic process
DJY80_RS08955	COG1522	sequence-specific DNA binding
DJY80_RS08970	COG3321	synthase
DJY80_RS08970	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS08970	COG0604	alcohol dehydrogenase
DJY80_RS09005	COG1285	pathogenesis
DJY80_RS09030	COG1360	Flagellar Motor Protein
DJY80_RS09035	COG2198	Histidine kinase
DJY80_RS09035	COG0643	Histidine kinase
DJY80_RS09040	COG0835	chemotaxis
DJY80_RS09045	COG2271	Major facilitator Superfamily
DJY80_RS09050	COG0251	oxidation-reduction process
DJY80_RS09060	COG2964	Protein conserved in bacteria
DJY80_RS09080	COG0840	transmembrane signaling receptor activity
DJY80_RS09085	COG0840	transmembrane signaling receptor activity
DJY80_RS09090	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DJY80_RS09100	COG0745	RESPONSE REGULATOR receiver
DJY80_RS09105	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
DJY80_RS09115	COG3023	N-Acetylmuramoyl-L-alanine amidase
DJY80_RS09125	COG5295	Hep Hag repeat protein
DJY80_RS09135	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DJY80_RS09190	COG3121	Chaperone
DJY80_RS09210	COG3008	intermembrane lipid transfer
DJY80_RS09215	COG2995	paraquat-inducible protein a
DJY80_RS09220	COG1956	GAF domain-containing protein
DJY80_RS09230	COG0793	Belongs to the peptidase S41A family
DJY80_RS09245	COG3539	Fimbrial protein
DJY80_RS09250	COG3121	Chaperone
DJY80_RS09265	COG3121	Chaperone
DJY80_RS09270	COG2814	Major facilitator Superfamily
DJY80_RS09275	COG0823	Involved in the tonB-independent uptake of proteins
DJY80_RS09285	COG3023	N-Acetylmuramoyl-L-alanine amidase
DJY80_RS09290	COG1823	symporter activity
DJY80_RS09295	COG1988	membrane-bound metal-dependent
DJY80_RS09300	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DJY80_RS09305	COG1653	transport
DJY80_RS09310	COG3842	ATPase activity
DJY80_RS09315	COG0395	ABC-type sugar transport system, permease component
DJY80_RS09320	COG1175	transmembrane transport
DJY80_RS09330	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS09340	COG1917	Cupin 2, conserved barrel domain protein
DJY80_RS09345	COG3328	transposase activity
DJY80_RS09350	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJY80_RS09360	COG3001	Fructosamine kinase
DJY80_RS09370	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJY80_RS09375	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJY80_RS09380	COG1121	(ABC) transporter
DJY80_RS09385	COG0803	Belongs to the bacterial solute-binding protein 9 family
DJY80_RS09410	COG4249	Peptidase C14 caspase catalytic subunit p20
DJY80_RS09445	COG0072	phenylalanine-tRNA ligase activity
DJY80_RS09445	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DJY80_RS09450	COG0776	regulation of translation
DJY80_RS09465	COG0386	Belongs to the glutathione peroxidase family
DJY80_RS09515	COG0791	NLP P60 protein
DJY80_RS09540	COG0574	Belongs to the PEP-utilizing enzyme family
DJY80_RS09540	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DJY80_RS09550	COG0628	permease
DJY80_RS09555	COG0247	lactate metabolic process
DJY80_RS09555	COG0277	FAD linked oxidase domain protein
DJY80_RS09560	COG2050	protein possibly involved in aromatic compounds catabolism
DJY80_RS09570	COG0316	Belongs to the HesB IscA family
DJY80_RS09575	COG0719	Fe-S assembly protein
DJY80_RS09580	COG0396	ATPase activity
DJY80_RS09585	COG0719	Fe-S assembly protein
DJY80_RS09600	COG1388	LysM domain
DJY80_RS09600	COG1376	ErfK ybiS ycfS ynhG family protein
DJY80_RS09650	COG0307	riboflavin synthase, alpha
DJY80_RS09655	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DJY80_RS09660	COG2814	Major facilitator Superfamily
DJY80_RS09665	COG0583	DNA-binding transcription factor activity
DJY80_RS09685	COG0791	NLP P60 protein
DJY80_RS09695	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DJY80_RS09705	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DJY80_RS09710	COG0346	lactoylglutathione lyase activity
DJY80_RS09720	COG1309	transcriptional regulator
DJY80_RS09725	COG2194	sulfuric ester hydrolase activity
DJY80_RS09740	COG3133	Outer membrane lipoprotein
DJY80_RS09750	COG3895	Periplasmic Protein
DJY80_RS09770	COG0625	glutathione transferase activity
DJY80_RS09785	COG3104	oligopeptide transport
DJY80_RS09790	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DJY80_RS09790	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DJY80_RS09795	COG4172	Belongs to the ABC transporter superfamily
DJY80_RS09805	COG4171	peptide transport system, permease
DJY80_RS09810	COG4168	peptide transport system, permease
DJY80_RS09815	COG4166	transmembrane transport
DJY80_RS09830	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DJY80_RS09835	COG1842	Phage shock protein A
DJY80_RS09845	COG1983	PspC domain protein
DJY80_RS09855	COG3106	COG3106 Predicted ATPase
DJY80_RS09865	COG5654	RES domain protein
DJY80_RS09870	COG5642	Protein of unknown function (DUF2384)
DJY80_RS09900	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DJY80_RS09905	COG4948	Mandelate Racemase Muconate Lactonizing
DJY80_RS09910	COG2866	Carboxypeptidase
DJY80_RS09915	COG4166	transmembrane transport
DJY80_RS09935	COG0657	acetylesterase activity
DJY80_RS09945	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJY80_RS09945	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DJY80_RS09945	COG1013	pyruvate-flavodoxin oxidoreductase activity
DJY80_RS09945	COG0674	pyruvate-flavodoxin oxidoreductase activity
DJY80_RS09955	COG1285	pathogenesis
DJY80_RS09960	COG3042	response to heat
DJY80_RS09965	COG3187	Heat shock protein
DJY80_RS09970	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DJY80_RS09975	COG2911	Protein conserved in bacteria
DJY80_RS09985	COG3784	Protein of unknown function (DUF1318)
DJY80_RS09990	COG0246	Mannitol dehydrogenase
DJY80_RS09995	COG2390	Transcriptional regulator
DJY80_RS10005	COG1643	Atp-dependent helicase
DJY80_RS10020	COG3591	Belongs to the peptidase S1B family
DJY80_RS10070	COG1454	alcohol dehydrogenase
DJY80_RS10070	COG1012	belongs to the aldehyde dehydrogenase family
DJY80_RS10080	COG2095	MarC family integral membrane protein
DJY80_RS10090	COG0601	transmembrane transport
DJY80_RS10095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJY80_RS10100	COG0444	Belongs to the ABC transporter superfamily
DJY80_RS10105	COG4608	Belongs to the ABC transporter superfamily
DJY80_RS10145	COG2350	Protein conserved in bacteria
DJY80_RS10150	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DJY80_RS10155	COG3328	transposase activity
DJY80_RS10195	COG3047	cAMP biosynthetic process
DJY80_RS10215	COG0135	phosphoribosylanthranilate isomerase activity
DJY80_RS10215	COG0134	indole-3-glycerol-phosphate synthase activity
DJY80_RS10225	COG0512	Glutamine amidotransferase of anthranilate synthase
DJY80_RS10250	COG0009	L-threonylcarbamoyladenylate synthase
DJY80_RS10255	COG1187	pseudouridine synthase activity
DJY80_RS10265	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS10270	COG0616	signal peptide processing
DJY80_RS10290	COG0583	DNA-binding transcription factor activity
DJY80_RS10300	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DJY80_RS10310	COG0671	phosphoesterase, PA-phosphatase related
DJY80_RS10315	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
DJY80_RS10320	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DJY80_RS10335	COG0023	Translation Initiation Factor
DJY80_RS10355	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DJY80_RS10360	COG2879	small protein
DJY80_RS10365	COG1966	Carbon starvation protein
DJY80_RS10375	COG2271	Major facilitator Superfamily
DJY80_RS10380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJY80_RS10385	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DJY80_RS10395	COG4659	FMN binding
DJY80_RS10400	COG4658	electron transport chain
DJY80_RS10405	COG2207	Transcriptional regulator
DJY80_RS10405	COG3708	Transcriptional regulator
DJY80_RS10440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJY80_RS10445	COG2274	protein secretion by the type I secretion system
DJY80_RS10460	COG1879	ABC-type sugar transport system periplasmic component
DJY80_RS10465	COG1129	ABC transporter
DJY80_RS10470	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS10480	COG0673	inositol 2-dehydrogenase activity
DJY80_RS10485	COG0385	Bile acid
DJY80_RS10495	COG5339	Protein conserved in bacteria
DJY80_RS10505	COG0114	fumarate hydratase activity
DJY80_RS10515	COG2814	Major facilitator Superfamily
DJY80_RS10520	COG0583	DNA-binding transcription factor activity
DJY80_RS10525	COG1940	carbohydrate kinase activity
DJY80_RS10530	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DJY80_RS10535	COG0038	chloride channel
DJY80_RS10545	COG1609	Transcriptional regulator
DJY80_RS10565	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJY80_RS10575	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DJY80_RS10605	COG0028	Belongs to the TPP enzyme family
DJY80_RS10610	COG0440	acetolactate synthase activity
DJY80_RS10615	COG1011	Hydrolase
DJY80_RS10630	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DJY80_RS10635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DJY80_RS10640	COG0589	response to stress
DJY80_RS10645	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DJY80_RS10650	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DJY80_RS10665	COG0531	amino acid
DJY80_RS10675	COG0745	RESPONSE REGULATOR receiver
DJY80_RS10680	COG2205	protein histidine kinase activity
DJY80_RS10685	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DJY80_RS10720	COG0745	RESPONSE REGULATOR receiver
DJY80_RS10730	COG0788	formyltetrahydrofolate deformylase activity
DJY80_RS10735	COG3328	transposase activity
DJY80_RS10755	COG0583	DNA-binding transcription factor activity
DJY80_RS10760	COG0708	Exodeoxyribonuclease III
DJY80_RS10765	COG0494	nUDIX hydrolase
DJY80_RS10775	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DJY80_RS10780	COG0709	Synthesizes selenophosphate from selenide and ATP
DJY80_RS10785	COG0778	Nitroreductase
DJY80_RS10790	COG0616	signal peptide processing
DJY80_RS10795	COG0252	asparaginase activity
DJY80_RS10800	COG1335	isochorismatase
DJY80_RS10805	COG3139	Protein of unknown function (DUF1315)
DJY80_RS10825	COG3713	MltA-interacting MipA family protein
DJY80_RS10835	COG2766	serine protein kinase
DJY80_RS10850	COG0583	DNA-binding transcription factor activity
DJY80_RS10860	COG2814	Major facilitator Superfamily
DJY80_RS10870	COG2719	SpoVR family
DJY80_RS10905	COG1104	cysteine desulfurase activity
DJY80_RS10915	COG3328	transposase activity
DJY80_RS11080	COG3328	transposase activity
DJY80_RS11175	COG0582	viral genome integration into host DNA
DJY80_RS11185	COG0179	Fumarylacetoacetate (FAA) hydrolase
DJY80_RS11190	COG2951	lytic endotransglycosylase activity
DJY80_RS11205	COG2894	cell division
DJY80_RS11210	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
DJY80_RS11215	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
DJY80_RS11220	COG0318	PFAM AMP-dependent synthetase and ligase
DJY80_RS11230	COG3065	identical protein binding
DJY80_RS11240	COG1199	ATP-dependent helicase activity
DJY80_RS11245	COG0251	oxidation-reduction process
DJY80_RS11260	COG0800	Aldolase
DJY80_RS11270	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DJY80_RS11275	COG1737	Transcriptional regulator
DJY80_RS11280	COG0469	pyruvate kinase activity
DJY80_RS11290	COG1560	Kdo2-lipid A biosynthetic process
DJY80_RS11295	COG0739	heme binding
DJY80_RS11300	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DJY80_RS11310	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJY80_RS11340	COG0494	nUDIX hydrolase
DJY80_RS11350	COG1801	Protein of unknown function DUF72
DJY80_RS11355	COG3788	relative of glutathione S-transferase, MAPEG superfamily
DJY80_RS11375	COG3102	Protein conserved in bacteria
DJY80_RS11395	COG0728	peptidoglycan biosynthetic process
DJY80_RS11405	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJY80_RS11420	COG3381	protein complex oligomerization
DJY80_RS11435	COG1940	carbohydrate kinase activity
DJY80_RS11440	COG0584	glycerophosphoryl diester phosphodiesterase
DJY80_RS11460	COG1176	ABC-type spermidine putrescine transport system, permease component I
DJY80_RS11465	COG3833	ABC-type maltose transport systems, permease component
DJY80_RS11490	COG0659	secondary active sulfate transmembrane transporter activity
DJY80_RS11510	COG2890	protein-(glutamine-N5) methyltransferase activity
DJY80_RS11535	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DJY80_RS11550	COG0012	GTP binding
DJY80_RS11605	COG5002	protein histidine kinase activity
DJY80_RS11645	COG0500	methyltransferase
DJY80_RS11670	COG3328	transposase activity
DJY80_RS11715	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJY80_RS11735	COG0402	S-adenosylhomocysteine deaminase activity
DJY80_RS11780	COG3188	usher protein
DJY80_RS11790	COG3121	Chaperone
DJY80_RS11800	COG0582	viral genome integration into host DNA
DJY80_RS11805	COG1169	isochorismate synthase
DJY80_RS11810	COG2814	Major facilitator Superfamily
DJY80_RS11815	COG1132	(ABC) transporter
DJY80_RS11830	COG2226	methyltransferase
DJY80_RS11830	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DJY80_RS11830	COG3433	isochorismatase activity
DJY80_RS11850	COG1021	2,3-dihydroxybenzoate-AMP ligase
DJY80_RS11855	COG4771	TonB-dependent receptor
DJY80_RS11930	COG3842	ATPase activity
DJY80_RS11935	COG0395	ABC-type sugar transport system, permease component
DJY80_RS11940	COG1175	transmembrane transport
DJY80_RS11950	COG0673	inositol 2-dehydrogenase activity
DJY80_RS11960	COG2188	Transcriptional regulator
DJY80_RS12105	COG2197	response regulator
DJY80_RS12115	COG3136	membrane protein required for alginate biosynthesis
DJY80_RS12140	COG1113	amino acid transport
DJY80_RS12160	COG2822	iron ion transport
DJY80_RS12165	COG0672	)-iron permease
DJY80_RS12180	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DJY80_RS12180	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DJY80_RS12180	COG0506	proline dehydrogenase activity
DJY80_RS12195	COG1126	abc transporter atp-binding protein
DJY80_RS12200	COG0765	amino acid transport
DJY80_RS12205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJY80_RS12220	COG1191	sigma factor activity
DJY80_RS12255	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
DJY80_RS12260	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
DJY80_RS12265	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DJY80_RS12285	COG1677	Flagellar hook-basal body complex protein FliE
DJY80_RS12305	COG1157	protein secretion by the type III secretion system
DJY80_RS12320	COG1580	Controls the rotational direction of flagella during chemotaxis
DJY80_RS12345	COG1987	bacterial-type flagellum assembly
DJY80_RS12365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJY80_RS12370	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS12375	COG1129	ABC transporter
DJY80_RS12385	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS12390	COG3347	Dehydrogenase
DJY80_RS12390	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS12395	COG2390	Transcriptional regulator
DJY80_RS12405	COG1256	bacterial-type flagellum assembly
DJY80_RS12445	COG1558	bacterial-type flagellum-dependent cell motility
DJY80_RS12450	COG1815	bacterial-type flagellum-dependent cell motility
DJY80_RS12460	COG2747	anti-sigma28 factor FlgM
DJY80_RS12465	COG3418	PFAM FlgN family protein
DJY80_RS12490	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJY80_RS12495	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJY80_RS12525	COG2372	response to copper ion
DJY80_RS12530	COG1528	Iron-storage protein
DJY80_RS12545	COG1770	oligopeptidase
DJY80_RS12560	COG3141	response to X-ray
DJY80_RS12565	COG0513	Belongs to the DEAD box helicase family
DJY80_RS12590	COG1760	l-serine dehydratase
DJY80_RS12595	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DJY80_RS12600	COG2368	4-hydroxyphenylacetate
DJY80_RS12615	COG3971	2-oxopent-4-enoate hydratase activity
DJY80_RS12625	COG3384	dioxygenase
DJY80_RS12630	COG1012	belongs to the aldehyde dehydrogenase family
DJY80_RS12645	COG1846	Transcriptional regulator
DJY80_RS12655	COG1253	flavin adenine dinucleotide binding
DJY80_RS12660	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJY80_RS12660	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJY80_RS12665	COG3715	PTS system
DJY80_RS12670	COG3716	PTS system mannose fructose sorbose family IID component
DJY80_RS12725	COG1132	(ABC) transporter
DJY80_RS12740	COG2207	Transcriptional regulator
DJY80_RS12780	COG1113	amino acid transport
DJY80_RS12805	COG1496	oxidoreductase activity
DJY80_RS12810	COG2226	methyltransferase
DJY80_RS12855	COG3328	transposase activity
DJY80_RS12860	COG2223	nitrite transmembrane transporter activity
DJY80_RS12885	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DJY80_RS12910	COG3122	Protein conserved in bacteria
DJY80_RS12930	COG0534	Mate efflux family protein
DJY80_RS12950	COG4948	Mandelate Racemase Muconate Lactonizing
DJY80_RS12960	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS12965	COG3011	Protein conserved in bacteria
DJY80_RS12970	COG2271	Major facilitator Superfamily
DJY80_RS12975	COG1470	cell adhesion involved in biofilm formation
DJY80_RS12975	COG1388	LysM domain
DJY80_RS12980	COG3328	transposase activity
DJY80_RS12995	COG2925	Exonuclease
DJY80_RS13005	COG0531	amino acid
DJY80_RS13015	COG0371	Dehydrogenase
DJY80_RS13020	COG1129	ABC transporter
DJY80_RS13025	COG1129	ABC transporter
DJY80_RS13030	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS13035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJY80_RS13050	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DJY80_RS13060	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DJY80_RS13060	COG0131	Imidazoleglycerol-phosphate dehydratase
DJY80_RS13080	COG0140	phosphoribosyl-ATP diphosphatase activity
DJY80_RS13080	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DJY80_RS13090	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DJY80_RS13095	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DJY80_RS13110	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJY80_RS13115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJY80_RS13120	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJY80_RS13125	COG1120	ATPase activity
DJY80_RS13140	COG3486	L-lysine 6-monooxygenase (NADPH) activity
DJY80_RS13145	COG0076	glutamate decarboxylase activity
DJY80_RS13150	COG4114	ferric iron reductase
DJY80_RS13155	COG1253	flavin adenine dinucleotide binding
DJY80_RS13160	COG2982	Protein involved in outer membrane biogenesis
DJY80_RS13175	COG0489	protein tyrosine kinase activity
DJY80_RS13205	COG2814	Major facilitator Superfamily
DJY80_RS13215	COG1346	cytolysis
DJY80_RS13230	COG2949	membrane
DJY80_RS13235	COG4211	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS13250	COG2311	Membrane
DJY80_RS13260	COG0477	Major facilitator Superfamily
DJY80_RS13265	COG0583	DNA-binding transcription factor activity
DJY80_RS13295	COG1136	(ABC) transporter
DJY80_RS13305	COG0303	'Molybdopterin
DJY80_RS13315	COG3328	transposase activity
DJY80_RS13325	COG0488	(ABC) transporter
DJY80_RS13455	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DJY80_RS13460	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DJY80_RS13470	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS13475	COG1024	Enoyl-CoA hydratase
DJY80_RS13485	COG3425	synthase
DJY80_RS13490	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS13495	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJY80_RS13500	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DJY80_RS13510	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS13535	COG2920	part of a sulfur-relay system
DJY80_RS13555	COG1832	CoA-binding protein
DJY80_RS13570	COG0210	DNA helicase
DJY80_RS13575	COG3304	Inner membrane component domain
DJY80_RS13580	COG1289	transmembrane transporter activity
DJY80_RS13585	COG3070	regulator of competence-specific genes
DJY80_RS13610	COG1067	ATP-dependent peptidase activity
DJY80_RS13650	COG3130	regulation of translation
DJY80_RS13660	COG3009	Protein conserved in bacteria
DJY80_RS13665	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DJY80_RS13665	COG3008	intermembrane lipid transfer
DJY80_RS13670	COG2995	paraquat-inducible protein a
DJY80_RS13675	COG0488	(ABC) transporter
DJY80_RS13685	COG0633	Ferredoxin
DJY80_RS13685	COG3217	Mosc domain protein beta barrel domain protein
DJY80_RS13700	COG0308	aminopeptidase N
DJY80_RS13720	COG1448	Aminotransferase
DJY80_RS13730	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJY80_RS13735	COG3108	Peptidase M15
DJY80_RS13740	COG2989	Protein conserved in bacteria
DJY80_RS13765	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DJY80_RS13780	COG3173	Aminoglycoside phosphotransferase
DJY80_RS13800	COG1278	Cold shock
DJY80_RS13810	COG5383	Protein conserved in bacteria
DJY80_RS13825	COG0658	competence protein
DJY80_RS13825	COG2333	competence protein COMEC
DJY80_RS13840	COG0539	negative regulation of cytoplasmic translation
DJY80_RS13865	COG5295	Hep Hag repeat protein
DJY80_RS13865	COG5295	Hep Hag repeat protein
DJY80_RS13870	COG0252	asparaginase activity
DJY80_RS13875	COG1944	ATP diphosphatase activity
DJY80_RS13880	COG2116	formate transmembrane transporter activity
DJY80_RS13885	COG1882	Formate acetyltransferase
DJY80_RS13895	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DJY80_RS13925	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DJY80_RS13935	COG3107	peptidoglycan biosynthetic process
DJY80_RS13935	COG1674	ftsk spoiiie
DJY80_RS13945	COG0492	ferredoxin-NADP+ reductase activity
DJY80_RS13955	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DJY80_RS13965	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DJY80_RS13980	COG0542	response to heat
DJY80_RS13995	COG1278	Cold shock
DJY80_RS14005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJY80_RS14010	COG2990	Protein conserved in bacteria
DJY80_RS14015	COG3593	DNA synthesis involved in DNA repair
DJY80_RS14020	COG2431	L-lysine efflux transmembrane transporter activity
DJY80_RS14030	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJY80_RS14035	COG0028	Belongs to the TPP enzyme family
DJY80_RS14045	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DJY80_RS14050	COG0702	epimerase
DJY80_RS14055	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJY80_RS14065	COG1605	Chorismate mutase
DJY80_RS14070	COG1126	abc transporter atp-binding protein
DJY80_RS14075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJY80_RS14080	COG4215	(ABC) transporter
DJY80_RS14085	COG4160	amino acid transport
DJY80_RS14105	COG1120	ATPase activity
DJY80_RS14110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJY80_RS14115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJY80_RS14140	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJY80_RS14155	COG1177	transmembrane transport
DJY80_RS14160	COG1176	ABC-type spermidine putrescine transport system, permease component I
DJY80_RS14165	COG3842	ATPase activity
DJY80_RS14170	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DJY80_RS14205	COG0671	phosphoesterase, PA-phosphatase related
DJY80_RS14215	COG1349	DNA-binding transcription factor activity
DJY80_RS14220	COG0814	amino acid
DJY80_RS14225	COG1686	Belongs to the peptidase S11 family
DJY80_RS14230	COG2011	ABC-type metal ion transport system permease component
DJY80_RS14255	COG0625	glutathione transferase activity
DJY80_RS14265	COG4771	TonB-dependent receptor
DJY80_RS14275	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJY80_RS14285	COG0833	amino acid
DJY80_RS14290	COG0583	DNA-binding transcription factor activity
DJY80_RS14295	COG2855	membrane
DJY80_RS14305	COG3188	usher protein
DJY80_RS14310	COG3121	Chaperone
DJY80_RS14325	COG3710	Transcriptional regulator
DJY80_RS14330	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJY80_RS14330	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DJY80_RS14330	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJY80_RS14335	COG1105	Belongs to the carbohydrate kinase PfkB family
DJY80_RS14345	COG0494	nUDIX hydrolase
DJY80_RS14355	COG1129	ABC transporter
DJY80_RS14390	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS14415	COG0246	Mannitol dehydrogenase
DJY80_RS14420	COG2186	Transcriptional regulator
DJY80_RS14430	COG0523	cobalamin synthesis protein
DJY80_RS14435	COG0671	phosphoesterase, PA-phosphatase related
DJY80_RS14440	COG0791	NLP P60 protein
DJY80_RS14445	COG2200	EAL domain
DJY80_RS14450	COG4166	transmembrane transport
DJY80_RS14455	COG4174	ABC transporter (Permease)
DJY80_RS14460	COG4239	(ABC) transporter, permease
DJY80_RS14465	COG4172	Belongs to the ABC transporter superfamily
DJY80_RS14475	COG2814	Major facilitator Superfamily
DJY80_RS14480	COG1187	pseudouridine synthase activity
DJY80_RS14485	COG1061	Type III restriction enzyme res subunit
DJY80_RS14510	COG3082	Protein of unknown function (DUF1414)
DJY80_RS14515	COG3083	sulfuric ester hydrolase activity
DJY80_RS14535	COG3157	Type VI secretion system effector, Hcp
DJY80_RS14565	COG2723	6-phospho-beta-galactosidase activity
DJY80_RS14570	COG1737	Transcriptional regulator
DJY80_RS14590	COG3299	homolog of phage Mu protein gp47
DJY80_RS14630	COG4386	tail sheath protein
DJY80_RS14650	COG3622	Belongs to the hyi family
DJY80_RS14655	COG1349	DNA-binding transcription factor activity
DJY80_RS14660	COG0235	Class ii aldolase
DJY80_RS14665	COG3395	kinase activity
DJY80_RS14710	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DJY80_RS14740	COG2223	nitrite transmembrane transporter activity
DJY80_RS14745	COG0642	Histidine kinase
DJY80_RS14745	COG2198	Histidine kinase
DJY80_RS14750	COG0642	Histidine kinase
DJY80_RS14750	COG2198	Histidine kinase
DJY80_RS14760	COG0784	Response regulator, receiver
DJY80_RS14760	COG2205	protein histidine kinase activity
DJY80_RS14785	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJY80_RS14800	COG0814	amino acid
DJY80_RS14830	COG0697	spore germination
DJY80_RS14840	COG1982	Orn Lys Arg decarboxylase major
DJY80_RS14845	COG0531	amino acid
DJY80_RS14850	COG1174	glycine betaine transport
DJY80_RS14855	COG1125	glycine betaine transport
DJY80_RS14860	COG1174	glycine betaine transport
DJY80_RS14870	COG2897	thiosulfate sulfurtransferase activity
DJY80_RS14890	COG1122	ATPase activity
DJY80_RS14910	COG4807	Protein conserved in bacteria
DJY80_RS14925	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DJY80_RS14935	COG2261	transglycosylase associated protein
DJY80_RS14955	COG0277	FAD linked oxidase domain protein
DJY80_RS14960	COG1686	Belongs to the peptidase S11 family
DJY80_RS14970	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJY80_RS15035	COG0513	Belongs to the DEAD box helicase family
DJY80_RS15040	COG1309	transcriptional regulator
DJY80_RS15050	COG1131	(ABC) transporter
DJY80_RS15055	COG0842	Transport permease protein
DJY80_RS15060	COG0842	Transport permease protein
DJY80_RS15080	COG1902	pentaerythritol trinitrate reductase activity
DJY80_RS15115	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DJY80_RS15125	COG0583	DNA-binding transcription factor activity
DJY80_RS15130	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DJY80_RS15155	COG0670	Belongs to the BI1 family
DJY80_RS15160	COG0314	molybdopterin synthase activity
DJY80_RS15165	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DJY80_RS15175	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DJY80_RS15180	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DJY80_RS15185	COG4628	conserved protein (DUF2132)
DJY80_RS15195	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DJY80_RS15205	COG2226	methyltransferase
DJY80_RS15230	COG0561	phosphatase activity
DJY80_RS15240	COG4149	molybdate abc transporter
DJY80_RS15245	COG0725	ABC transporter, periplasmic molybdate-binding protein
DJY80_RS15255	COG2005	Transcriptional regulator
DJY80_RS15255	COG3585	molybdate ion transport
DJY80_RS15265	COG1119	ATPase activity
DJY80_RS15275	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DJY80_RS15280	COG1085	galactose-1-phosphate uridylyltransferase
DJY80_RS15295	COG2017	converts alpha-aldose to the beta-anomer
DJY80_RS15310	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DJY80_RS15315	COG1230	cation diffusion facilitator family transporter
DJY80_RS15345	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DJY80_RS15350	COG2885	chlorophyll binding
DJY80_RS15360	COG3064	Membrane
DJY80_RS15360	COG3064	Membrane
DJY80_RS15365	COG0848	biopolymer transport protein
DJY80_RS15370	COG0811	peptide transport
DJY80_RS15375	COG0824	Thioesterase
DJY80_RS15380	COG3790	cyd operon protein YbgE
DJY80_RS15385	COG4890	Cyd operon protein YbgT
DJY80_RS15390	COG1294	oxidase, subunit
DJY80_RS15395	COG1271	oxidase subunit
DJY80_RS15400	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DJY80_RS15410	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJY80_RS15415	COG0567	Dehydrogenase, E1 component
DJY80_RS15425	COG1053	succinate dehydrogenase
DJY80_RS15430	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DJY80_RS15435	COG2009	succinate dehydrogenase
DJY80_RS15450	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DJY80_RS15455	COG0497	DNA recombination
DJY80_RS15460	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DJY80_RS15470	COG2867	negative regulation of translational initiation
DJY80_RS15495	COG0582	viral genome integration into host DNA
DJY80_RS15555	COG3657	addiction module killer protein
DJY80_RS15580	COG1953	Uracil, thiamine, allantoin
DJY80_RS15600	COG2226	methyltransferase
DJY80_RS15605	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJY80_RS15610	COG0741	lytic transglycosylase activity
DJY80_RS15610	COG1388	LysM domain
DJY80_RS15625	COG0656	L-ascorbic acid biosynthetic process
DJY80_RS15660	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DJY80_RS15670	COG2011	ABC-type metal ion transport system permease component
DJY80_RS15675	COG1464	Belongs to the NlpA lipoprotein family
DJY80_RS15685	COG1720	tRNA m6t6A37 methyltransferase activity
DJY80_RS15695	COG3015	lipoprotein NlpE involved in copper resistance
DJY80_RS15705	COG4681	YaeQ
DJY80_RS15715	COG4568	rho-dependent transcription termination
DJY80_RS15725	COG0037	tRNA processing
DJY80_RS15730	COG0346	lactoylglutathione lyase activity
DJY80_RS15740	COG0587	DNA-directed DNA polymerase activity
DJY80_RS15765	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DJY80_RS15780	COG0750	zinc metalloprotease
DJY80_RS15785	COG0575	Belongs to the CDS family
DJY80_RS15850	COG0564	pseudouridine synthase activity
DJY80_RS15855	COG3098	single-species biofilm formation
DJY80_RS15875	COG1611	Belongs to the LOG family
DJY80_RS15895	COG2363	Small membrane protein
DJY80_RS15900	COG0583	DNA-binding transcription factor activity
DJY80_RS15910	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DJY80_RS15915	COG2166	iron-sulfur cluster assembly
DJY80_RS15920	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DJY80_RS15925	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DJY80_RS15940	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJY80_RS15950	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DJY80_RS15955	COG1074	ATP-dependent DNA helicase activity
DJY80_RS15980	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DJY80_RS16045	COG0667	Aldo Keto reductase
DJY80_RS16075	COG1609	Transcriptional regulator
DJY80_RS16085	COG0583	DNA-binding transcription factor activity
DJY80_RS16090	COG2814	Major facilitator Superfamily
DJY80_RS16095	COG0583	DNA-binding transcription factor activity
DJY80_RS16110	COG0840	transmembrane signaling receptor activity
DJY80_RS16155	COG2165	general secretion pathway protein
DJY80_RS16180	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DJY80_RS16205	COG0288	reversible hydration of carbon dioxide
DJY80_RS16250	COG3119	arylsulfatase activity
DJY80_RS16255	COG1349	DNA-binding transcription factor activity
DJY80_RS16265	COG2222	sugar isomerase
DJY80_RS16270	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJY80_RS16275	COG3715	PTS system
DJY80_RS16280	COG3716	PTS system mannose fructose sorbose family IID component
DJY80_RS16285	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJY80_RS16295	COG1028	Short-chain dehydrogenase reductase Sdr
DJY80_RS16305	COG0641	radical SAM
DJY80_RS16310	COG3119	arylsulfatase activity
DJY80_RS16340	COG2271	Major facilitator Superfamily
DJY80_RS16360	COG1263	PTS System
DJY80_RS16360	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJY80_RS16365	COG1874	Beta-galactosidase
DJY80_RS16370	COG3867	Arabinogalactan endo-beta-1,4-galactanase
DJY80_RS16375	COG3833	ABC-type maltose transport systems, permease component
DJY80_RS16380	COG1175	transmembrane transport
DJY80_RS16385	COG2182	Extracellular solute-binding protein
DJY80_RS16395	COG1129	ABC transporter
DJY80_RS16400	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS16405	COG1879	ABC-type sugar transport system periplasmic component
DJY80_RS16415	COG0791	NLP P60 protein
DJY80_RS16420	COG1695	Transcriptional regulator
DJY80_RS16510	COG2944	sequence-specific DNA binding
DJY80_RS16535	COG0582	viral genome integration into host DNA
DJY80_RS16555	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DJY80_RS16560	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DJY80_RS16565	COG4974	Belongs to the 'phage' integrase family
DJY80_RS16570	COG0716	FMN binding
DJY80_RS16575	COG4452	Inner membrane protein CreD
DJY80_RS16580	COG2205	protein histidine kinase activity
DJY80_RS16585	COG0745	RESPONSE REGULATOR receiver
DJY80_RS16610	COG1272	protein, Hemolysin III
DJY80_RS16655	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJY80_RS16660	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJY80_RS16665	COG0006	proline dipeptidase activity
DJY80_RS16685	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DJY80_RS16690	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DJY80_RS16725	COG0191	fructose-bisphosphate aldolase activity
DJY80_RS16760	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DJY80_RS16765	COG0501	Belongs to the peptidase M48B family
DJY80_RS16780	COG1166	arginine decarboxylase activity
DJY80_RS16795	COG2356	endonuclease I
DJY80_RS16800	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DJY80_RS16805	COG0189	ligase activity
DJY80_RS16820	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DJY80_RS16830	COG2805	Type II/IV secretion system protein
DJY80_RS16835	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DJY80_RS16840	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DJY80_RS16850	COG0762	integral membrane protein
DJY80_RS16860	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DJY80_RS16865	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DJY80_RS16870	COG3064	Membrane
DJY80_RS16870	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
DJY80_RS16870	COG1073	alpha beta
DJY80_RS16885	COG3171	Protein conserved in bacteria
DJY80_RS16895	COG1194	a g-specific adenine glycosylase
DJY80_RS16915	COG4774	siderophore transport
DJY80_RS16920	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS16925	COG1129	ABC transporter
DJY80_RS16930	COG1879	ABC-type sugar transport system periplasmic component
DJY80_RS16935	COG1982	Orn Lys Arg decarboxylase major
DJY80_RS17065	COG3916	Acyl-homoserine-lactone synthase
DJY80_RS17070	COG2771	luxR family
DJY80_RS17120	COG2211	Major facilitator Superfamily
DJY80_RS17140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJY80_RS17195	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
DJY80_RS17200	COG2195	Cleaves the N-terminal amino acid of tripeptides
DJY80_RS17205	COG4771	TonB-dependent receptor
DJY80_RS17225	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DJY80_RS17225	COG2226	methyltransferase
DJY80_RS17225	COG3433	isochorismatase activity
DJY80_RS17260	COG1132	(ABC) transporter
DJY80_RS17260	COG2375	cellular response to nickel ion
DJY80_RS17265	COG1132	(ABC) transporter
DJY80_RS17280	COG2610	gluconate transmembrane transporter activity
DJY80_RS17295	COG3501	Rhs element vgr protein
DJY80_RS17325	COG0471	metal ion transport
DJY80_RS17350	COG3710	Transcriptional regulator
DJY80_RS17370	COG1256	bacterial-type flagellum assembly
DJY80_RS17380	COG1706	bacterial-type flagellum-dependent cell motility
DJY80_RS17390	COG4786	Flagellar basal body rod
DJY80_RS17395	COG4787	bacterial-type flagellum-dependent cell motility
DJY80_RS17400	COG1749	Flagellar hook protein flgE
DJY80_RS17405	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DJY80_RS17410	COG1558	bacterial-type flagellum-dependent cell motility
DJY80_RS17415	COG1815	bacterial-type flagellum-dependent cell motility
DJY80_RS17420	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
DJY80_RS17460	COG1677	Flagellar hook-basal body complex protein FliE
DJY80_RS17485	COG1987	bacterial-type flagellum assembly
DJY80_RS17490	COG1684	flagellar biosynthetic protein fliR
DJY80_RS17495	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJY80_RS17515	COG4592	Periplasmic binding protein
DJY80_RS17550	COG4964	Belongs to the GSP D family
DJY80_RS17555	COG4964	Belongs to the GSP D family
DJY80_RS17610	COG0848	biopolymer transport protein
DJY80_RS17615	COG0811	peptide transport
DJY80_RS17620	COG0626	cystathionine gamma-synthase activity
DJY80_RS17625	COG0586	Pfam SNARE associated Golgi protein
DJY80_RS17630	COG2207	Transcriptional regulator
DJY80_RS17635	COG1979	alcohol dehydrogenase
DJY80_RS17645	COG0656	L-ascorbic acid biosynthetic process
DJY80_RS17660	COG2132	Multicopper oxidase
DJY80_RS17675	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DJY80_RS17690	COG0583	DNA-binding transcription factor activity
DJY80_RS17700	COG3150	esterase
DJY80_RS17705	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DJY80_RS17710	COG3151	Protein conserved in bacteria
DJY80_RS17715	COG0494	nUDIX hydrolase
DJY80_RS17720	COG1538	Outer membrane efflux protein
DJY80_RS17735	COG0754	glutathionylspermidine amidase activity
DJY80_RS17740	COG3384	dioxygenase
DJY80_RS17760	COG0531	amino acid
DJY80_RS17775	COG3025	triphosphatase activity
DJY80_RS17780	COG4991	sh3 domain protein
DJY80_RS17795	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DJY80_RS17815	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DJY80_RS17820	COG0358	DNA primase activity
DJY80_RS17905	COG0251	oxidation-reduction process
DJY80_RS17950	COG1289	transmembrane transporter activity
DJY80_RS17970	COG0395	ABC-type sugar transport system, permease component
DJY80_RS17980	COG2182	Extracellular solute-binding protein
DJY80_RS17985	COG1609	Transcriptional regulator
DJY80_RS17990	COG3459	Glycosyltransferase 36 associated
DJY80_RS17995	COG3842	ATPase activity
DJY80_RS18015	COG3210	domain, Protein
DJY80_RS18020	COG3210	domain, Protein
DJY80_RS18045	COG3210	domain, Protein
DJY80_RS18050	COG2831	hemolysin activation secretion protein
DJY80_RS18055	COG4245	von Willebrand factor, type A
DJY80_RS18070	COG4245	von Willebrand factor, type A
DJY80_RS18090	COG3247	response to pH
DJY80_RS18095	COG1902	pentaerythritol trinitrate reductase activity
DJY80_RS18095	COG0446	pyridine nucleotide-disulphide oxidoreductase
DJY80_RS18110	COG1451	nucleotide metabolic process
DJY80_RS18115	COG0673	inositol 2-dehydrogenase activity
DJY80_RS18135	COG2721	sulfolactate sulfo-lyase activity
DJY80_RS18150	COG2271	Major facilitator Superfamily
DJY80_RS18165	COG0586	Pfam SNARE associated Golgi protein
DJY80_RS18185	COG4575	ribosome binding
DJY80_RS18190	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
DJY80_RS18200	COG2259	Doxx family
DJY80_RS18220	COG0494	nUDIX hydrolase
DJY80_RS18250	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DJY80_RS18255	COG0849	cell division
DJY80_RS18260	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DJY80_RS18280	COG0772	Belongs to the SEDS family
DJY80_RS18295	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DJY80_RS18300	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DJY80_RS18305	COG0768	penicillin binding
DJY80_RS18310	COG3116	cell division
DJY80_RS18335	COG1609	Transcriptional regulator
DJY80_RS18355	COG0028	Belongs to the TPP enzyme family
DJY80_RS18365	COG1022	Amp-dependent synthetase and ligase
DJY80_RS18395	COG0473	3-isopropylmalate dehydrogenase activity
DJY80_RS18410	COG2814	Major facilitator Superfamily
DJY80_RS18425	COG4143	(ABC) transporter
DJY80_RS18430	COG1178	ABC-type Fe3 transport system permease component
DJY80_RS18435	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
DJY80_RS18440	COG0586	Pfam SNARE associated Golgi protein
DJY80_RS18445	COG0417	DNA replication proofreading
DJY80_RS18465	COG3047	cAMP biosynthetic process
DJY80_RS18465	COG2885	chlorophyll binding
DJY80_RS18550	COG0564	pseudouridine synthase activity
DJY80_RS18555	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DJY80_RS18605	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DJY80_RS18615	COG2966	Psort location CytoplasmicMembrane, score
DJY80_RS18620	COG1280	lysine exporter protein (LysE YggA)
DJY80_RS18625	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DJY80_RS18650	COG1047	Peptidyl-prolyl cis-trans
DJY80_RS18665	COG0196	riboflavin kinase activity
DJY80_RS18685	COG0583	DNA-binding transcription factor activity
DJY80_RS18705	COG1584	GPR1 FUN34 yaaH family protein
DJY80_RS18720	COG0521	Mo-molybdopterin cofactor biosynthetic process
DJY80_RS18760	COG0745	RESPONSE REGULATOR receiver
DJY80_RS18765	COG3045	CreA protein
DJY80_RS18775	COG2207	Transcriptional regulator
DJY80_RS18775	COG3708	Transcriptional regulator
DJY80_RS18790	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
DJY80_RS18795	COG0741	lytic transglycosylase activity
DJY80_RS18810	COG2199	diguanylate cyclase activity
DJY80_RS18815	COG2885	chlorophyll binding
DJY80_RS18840	COG0560	Phosphoserine phosphatase
DJY80_RS18845	COG3726	membrane protein affecting hemolysin expression
DJY80_RS18870	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJY80_RS18875	COG0084	hydrolase, TatD family'
DJY80_RS18880	COG4667	esterase of the alpha-beta hydrolase superfamily
DJY80_RS18890	COG2823	Periplasmic or secreted lipoprotein
DJY80_RS18900	COG0456	acetyltransferase
DJY80_RS18905	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
DJY80_RS18950	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJY80_RS18955	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJY80_RS18970	COG0859	PFAM glycosyl transferase family 9
DJY80_RS18975	COG1070	Carbohydrate kinase
DJY80_RS19025	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJY80_RS19025	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DJY80_RS19025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJY80_RS19030	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJY80_RS19035	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJY80_RS19040	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJY80_RS19045	COG2207	Transcriptional regulator
DJY80_RS19055	COG4269	membrane
DJY80_RS19115	COG1401	restriction endodeoxyribonuclease activity
DJY80_RS19140	COG1011	Hydrolase
DJY80_RS19150	COG0174	glutamine synthetase
DJY80_RS19155	COG3852	Histidine kinase
DJY80_RS19165	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DJY80_RS19200	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJY80_RS19200	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJY80_RS19205	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DJY80_RS19210	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DJY80_RS19215	COG3084	Protein conserved in bacteria
DJY80_RS19225	COG1763	Mo-molybdopterin cofactor biosynthetic process
DJY80_RS19230	COG3328	transposase activity
DJY80_RS19300	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DJY80_RS19300	COG0678	peroxiredoxin activity
DJY80_RS19305	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJY80_RS19330	COG1629	transport
DJY80_RS19345	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DJY80_RS19400	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DJY80_RS19405	COG0058	SHG alpha-glucan phosphorylase activity
DJY80_RS19430	COG3275	phosphorelay sensor kinase activity
DJY80_RS19460	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DJY80_RS19465	COG2095	MarC family integral membrane protein
DJY80_RS19485	COG3265	gluconokinase activity
DJY80_RS19490	COG2610	gluconate transmembrane transporter activity
DJY80_RS19495	COG1609	Transcriptional regulator
DJY80_RS19500	COG1741	Belongs to the pirin family
DJY80_RS19525	COG0191	fructose-bisphosphate aldolase activity
DJY80_RS19540	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJY80_RS19555	COG2081	HI0933 family
DJY80_RS19560	COG0306	phosphate transporter
DJY80_RS19575	COG0589	response to stress
DJY80_RS19595	COG0339	signal peptide processing
DJY80_RS19600	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DJY80_RS19605	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJY80_RS19610	COG3835	regulator
DJY80_RS19620	COG2610	gluconate transmembrane transporter activity
DJY80_RS19625	COG1929	Belongs to the glycerate kinase type-1 family
DJY80_RS19650	COG1295	ribonuclease BN
DJY80_RS19655	COG2134	cdp-diacylglycerol pyrophosphatase
DJY80_RS19660	COG2982	Protein involved in outer membrane biogenesis
DJY80_RS19665	COG2200	EAL domain
DJY80_RS19670	COG1942	4-Oxalocrotonate Tautomerase
DJY80_RS19675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJY80_RS19680	COG0612	Peptidase, M16
DJY80_RS19700	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DJY80_RS19705	COG2200	EAL domain
DJY80_RS19705	COG2199	diguanylate cyclase activity
DJY80_RS19710	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DJY80_RS19715	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DJY80_RS19720	COG4608	Belongs to the ABC transporter superfamily
DJY80_RS19725	COG0444	Belongs to the ABC transporter superfamily
DJY80_RS19730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJY80_RS19735	COG0601	transmembrane transport
DJY80_RS19740	COG0747	negative chemotaxis
DJY80_RS19750	COG2831	hemolysin activation secretion protein
DJY80_RS19765	COG2271	Major facilitator Superfamily
DJY80_RS19785	COG0456	acetyltransferase
DJY80_RS19790	COG2982	Protein involved in outer membrane biogenesis
DJY80_RS19795	COG2233	PERMEase
DJY80_RS19800	COG0786	glutamate:sodium symporter activity
DJY80_RS19810	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DJY80_RS19815	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJY80_RS19820	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DJY80_RS19840	COG2860	membrane
DJY80_RS19845	COG1561	YicC-like family, N-terminal region
DJY80_RS19870	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DJY80_RS19910	COG1519	Transferase
DJY80_RS19915	COG0859	PFAM glycosyl transferase family 9
DJY80_RS19920	COG0859	PFAM glycosyl transferase family 9
DJY80_RS19930	COG0156	8-amino-7-oxononanoate synthase activity
DJY80_RS19945	COG4942	peptidase
DJY80_RS19955	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJY80_RS19960	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DJY80_RS19980	COG1045	serine acetyltransferase
DJY80_RS19985	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DJY80_RS19990	COG2169	Transcriptional regulator
DJY80_RS19990	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DJY80_RS19995	COG2205	protein histidine kinase activity
DJY80_RS20000	COG0745	RESPONSE REGULATOR receiver
DJY80_RS20005	COG3678	ATP-independent chaperone mediated protein folding
DJY80_RS20035	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DJY80_RS20045	COG0471	metal ion transport
DJY80_RS20050	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DJY80_RS20065	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DJY80_RS20070	COG0583	DNA-binding transcription factor activity
DJY80_RS20085	COG3152	Membrane
DJY80_RS20095	COG1494	fructose-1,6-bisphosphatase
DJY80_RS20100	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DJY80_RS20105	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DJY80_RS20165	COG1575	Belongs to the MenA family. Type 1 subfamily
DJY80_RS20180	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DJY80_RS20195	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DJY80_RS20205	COG4682	membrane
DJY80_RS20220	COG0527	aspartate kinase activity
DJY80_RS20220	COG0460	homoserine dehydrogenase
DJY80_RS20240	COG1349	DNA-binding transcription factor activity
DJY80_RS20260	COG0058	SHG alpha-glucan phosphorylase activity
DJY80_RS20265	COG0058	SHG alpha-glucan phosphorylase activity
DJY80_RS20270	COG1640	4-alpha-glucanotransferase
DJY80_RS20305	COG1918	ferrous iron import across plasma membrane
DJY80_RS20310	COG2183	response to ionizing radiation
DJY80_RS20315	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DJY80_RS20340	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DJY80_RS20345	COG1011	Hydrolase
DJY80_RS20355	COG0494	nUDIX hydrolase
DJY80_RS20360	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DJY80_RS20390	COG4796	Type ii and iii secretion system protein
DJY80_RS20415	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DJY80_RS20420	COG0546	phosphoglycolate phosphatase activity
DJY80_RS20425	COG0180	Tryptophanyl-tRNA synthetase
DJY80_RS20445	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DJY80_RS20450	COG0402	S-adenosylhomocysteine deaminase activity
DJY80_RS20485	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DJY80_RS20500	COG0551	DNA topoisomerase type I activity
DJY80_RS20510	COG0758	DNA mediated transformation
DJY80_RS20540	COG3036	rescue of stalled ribosome
DJY80_RS20545	COG0789	Transcriptional regulator
DJY80_RS20560	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DJY80_RS20575	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DJY80_RS20580	COG0201	protein transport
DJY80_RS20590	COG1841	ribosomal large subunit assembly
DJY80_RS20630	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DJY80_RS20635	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DJY80_RS20645	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DJY80_RS20650	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DJY80_RS20660	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DJY80_RS20670	COG0089	rRNA binding
DJY80_RS20685	COG0051	transcription antitermination factor activity, RNA binding
DJY80_RS20720	COG0049	tRNA binding
DJY80_RS20725	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DJY80_RS20745	COG2964	Protein conserved in bacteria
DJY80_RS20750	COG0545	Peptidyl-prolyl cis-trans isomerase
DJY80_RS20765	COG1047	Peptidyl-prolyl cis-trans
DJY80_RS20770	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DJY80_RS20790	COG1216	Glycosyl transferase, family 2
DJY80_RS20800	COG2175	clavaminate synthase activity
DJY80_RS20805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJY80_RS20815	COG4521	taurine ABC transporter
DJY80_RS20825	COG0429	hydrolase of the alpha beta-hydrolase fold
DJY80_RS20835	COG3954	Phosphoribulokinase
DJY80_RS20845	COG1765	OsmC-like protein
DJY80_RS20855	COG1289	transmembrane transporter activity
DJY80_RS20870	COG0433	COG0433 Predicted ATPase
DJY80_RS20875	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DJY80_RS20900	COG2197	response regulator
DJY80_RS20905	COG2194	sulfuric ester hydrolase activity
DJY80_RS20920	COG2986	histidine ammonia-lyase
DJY80_RS20950	COG4607	ABC-type enterochelin transport system periplasmic component
DJY80_RS20960	COG4605	iron ion homeostasis
DJY80_RS20965	COG4604	ABC transporter, ATP-binding protein
DJY80_RS21015	COG0582	viral genome integration into host DNA
DJY80_RS21025	COG1609	Transcriptional regulator
DJY80_RS21025	COG2207	Transcriptional regulator
DJY80_RS21030	COG4214	carbohydrate transport
DJY80_RS21040	COG4213	ABC transporter substrate-binding protein
DJY80_RS21050	COG1070	Carbohydrate kinase
DJY80_RS21060	COG3121	Chaperone
DJY80_RS21075	COG3274	enterobacterial common antigen metabolic process
DJY80_RS21160	COG1175	transmembrane transport
DJY80_RS21165	COG3833	ABC-type maltose transport systems, permease component
DJY80_RS21180	COG0527	aspartate kinase activity
DJY80_RS21210	COG2224	Isocitrate lyase
DJY80_RS21215	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DJY80_RS21265	COG2186	Transcriptional regulator
DJY80_RS21270	COG0477	Major facilitator Superfamily
DJY80_RS21285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJY80_RS21315	COG1522	sequence-specific DNA binding
DJY80_RS21320	COG0716	FMN binding
DJY80_RS21340	COG3312	ion transport
DJY80_RS21400	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DJY80_RS21405	COG0573	inorganic phosphate transmembrane transporter activity
DJY80_RS21410	COG0581	inorganic phosphate transmembrane transporter activity
DJY80_RS21420	COG0704	Plays a role in the regulation of phosphate uptake
DJY80_RS21430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJY80_RS21435	COG0765	amino acid transport
DJY80_RS21440	COG0765	amino acid transport
DJY80_RS21445	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJY80_RS21455	COG2252	PERMEase
DJY80_RS21485	COG0706	membrane insertase activity
DJY80_RS21500	COG0230	Belongs to the bacterial ribosomal protein bL34 family
DJY80_RS21570	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DJY80_RS21580	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJY80_RS21700	COG1475	DNA binding
DJY80_RS21800	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJY80_RS21810	COG3344	reverse transcriptase
DJY80_RS21835	COG3328	transposase activity
DJY80_RS21875	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DJY80_RS21885	COG5301	cellulose 1,4-beta-cellobiosidase activity
DJY80_RS21885	COG5301	cellulose 1,4-beta-cellobiosidase activity
DJY80_RS21920	COG3941	tape measure
DJY80_RS22015	COG1475	DNA binding
DJY80_RS22020	COG1475	DNA binding
DJY80_RS22025	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DJY80_RS22115	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DJY80_RS22165	COG0515	serine threonine protein kinase
DJY80_RS22225	COG5599	Phosphatase
DJY80_RS22230	COG1317	bacterial-type flagellum organization
DJY80_RS22240	COG4669	(LipO)protein
DJY80_RS22275	COG1450	Type ii and iii secretion system protein
DJY80_RS22290	COG2207	Transcriptional regulator
DJY80_RS22300	COG4792	protein secretion
DJY80_RS22305	COG4791	protein targeting
DJY80_RS22310	COG4794	Type iii secretion
DJY80_RS22315	COG4790	Type iii secretion
DJY80_RS22365	COG4789	Type iii secretion
DJY80_RS22385	COG0457	Tetratricopeptide repeat
DJY80_RS22415	COG4886	Leucine-rich repeat (LRR) protein
DJY80_RS22425	COG3328	transposase activity
DJY80_RS22450	COG3177	Filamentation induced by cAMP protein fic
DJY80_RS22505	COG3609	addiction module antidote protein, CC2985 family
DJY80_RS22670	COG4683	PFAM Phage derived protein Gp49-like (DUF891)