locus-tag class description FDJ41_gp019 IPR026325 Protein of unknown function DUF932 FDJ41_gp077 IPR029052 Metallo-dependent phosphatase-like FDJ41_gp077 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type FDJ41_gp077 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase FDJ41_gp086 IPR018215 ClpP, Ser active site FDJ41_gp086 IPR033135 ClpP, histidine active site FDJ41_gp086 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA FDJ41_gp086 IPR029045 ClpP/crotonase-like domain superfamily FDJ41_gp086 IPR001907 ATP-dependent Clp protease proteolytic subunit FDJ41_gp094 IPR008964 Invasin/intimin cell-adhesion fragments FDJ41_gp094 IPR013783 Immunoglobulin-like fold FDJ41_gp094 IPR029062 Class I glutamine amidotransferase-like FDJ41_gp094 IPR003343 Bacterial Ig-like, group 2 FDJ41_gp096 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FDJ41_gp096 IPR004821 Cytidyltransferase-like domain FDJ41_gp096 IPR020084 NUDIX hydrolase, conserved site FDJ41_gp096 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain FDJ41_gp096 IPR015797 NUDIX hydrolase-like domain superfamily FDJ41_gp096 IPR000086 NUDIX hydrolase domain FDJ41_gp105 IPR029035 DHS-like NAD/FAD-binding domain superfamily FDJ41_gp105 IPR026590 Sirtuin family, catalytic core domain FDJ41_gp105 IPR027546 Sirtuin, class III FDJ41_gp105 IPR026591 Sirtuin, catalytic core small domain superfamily FDJ41_gp105 IPR003000 Sirtuin family FDJ41_gp108 IPR029060 PIN-like domain superfamily FDJ41_gp108 IPR003714 PhoH-like protein FDJ41_gp108 IPR002716 PIN domain FDJ41_gp108 IPR027417 P-loop containing nucleoside triphosphate hydrolase FDJ41_gp117 IPR020818 GroES chaperonin family FDJ41_gp117 IPR037124 GroES chaperonin superfamily FDJ41_gp117 IPR018369 Chaperonin GroES, conserved site FDJ41_gp117 IPR011032 GroES-like superfamily FDJ41_gp118 IPR036986 RNA-binding S4 domain superfamily FDJ41_gp118 IPR002942 RNA-binding S4 domain FDJ41_gp118 IPR002305 Aminoacyl-tRNA synthetase, class Ic FDJ41_gp118 IPR024088 Tyrosine-tRNA ligase, bacterial-type FDJ41_gp118 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site FDJ41_gp118 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FDJ41_gp118 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 FDJ41_gp118 IPR002307 Tyrosine-tRNA ligase FDJ41_gp130 IPR005144 ATP-cone domain FDJ41_gp130 IPR001150 Glycine radical domain FDJ41_gp130 IPR019777 Formate C-acetyltransferase glycine radical, conserved site FDJ41_gp130 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic FDJ41_gp132 IPR001150 Glycine radical domain FDJ41_gp132 IPR011140 Autonomous glycyl radical cofactor GrcA FDJ41_gp132 IPR019777 Formate C-acetyltransferase glycine radical, conserved site FDJ41_gp135 IPR013785 Aldolase-type TIM barrel FDJ41_gp135 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic FDJ41_gp135 IPR034457 Organic radical-activating enzymes FDJ41_gp135 IPR001989 Radical-activating enzyme, conserved site FDJ41_gp135 IPR007197 Radical SAM FDJ41_gp147 IPR002052 DNA methylase, N-6 adenine-specific, conserved site FDJ41_gp147 IPR001091 Restriction/modification DNA-methylase FDJ41_gp147 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FDJ41_gp147 IPR002941 DNA methylase N-4/N-6 FDJ41_gp153 IPR006162 Phosphopantetheine attachment site FDJ41_gp153 IPR003231 Acyl carrier protein (ACP) FDJ41_gp153 IPR036736 ACP-like superfamily FDJ41_gp153 IPR009081 Phosphopantetheine binding ACP domain FDJ41_gp166 IPR001267 Thymidine kinase FDJ41_gp166 IPR027417 P-loop containing nucleoside triphosphate hydrolase FDJ41_gp166 IPR020633 Thymidine kinase, conserved site FDJ41_gp181 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily FDJ41_gp181 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal FDJ41_gp181 IPR003489 Ribosome hibernation promoting factor/RaiA FDJ41_gp181 IPR036567 Ribosome hibernation promotion factor-like FDJ41_gp181 IPR034694 Ribosome hibernation promoting factor, long/plastid FDJ41_gp183 IPR003607 HD/PDEase domain FDJ41_gp183 IPR006674 HD domain FDJ41_gp183 IPR002646 Poly A polymerase, head domain FDJ41_gp183 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain FDJ41_gp183 IPR012006 tRNA nucleotidyltransferase, proteobacteria FDJ41_gp185 IPR011902 Glutaredoxin, GrxA FDJ41_gp185 IPR014025 Glutaredoxin subgroup FDJ41_gp185 IPR036249 Thioredoxin-like superfamily FDJ41_gp185 IPR002109 Glutaredoxin FDJ41_gp215 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily FDJ41_gp215 IPR000398 Thymidylate synthase FDJ41_gp215 IPR020940 Thymidylate synthase, active site FDJ41_gp215 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain FDJ41_gp225 IPR000086 NUDIX hydrolase domain FDJ41_gp225 IPR022927 RNA pyrophosphohydrolase RppH FDJ41_gp225 IPR020084 NUDIX hydrolase, conserved site FDJ41_gp225 IPR015797 NUDIX hydrolase-like domain superfamily FDJ41_gp225 IPR020476 NUDIX hydrolase FDJ41_gp228 IPR004176 Clp, N-terminal FDJ41_gp228 IPR003959 ATPase, AAA-type, core FDJ41_gp228 IPR003593 AAA+ ATPase domain FDJ41_gp228 IPR019489 Clp ATPase, C-terminal FDJ41_gp228 IPR036628 Clp, N-terminal domain superfamily FDJ41_gp228 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA FDJ41_gp228 IPR001270 ClpA/B family FDJ41_gp228 IPR018368 ClpA/B, conserved site 1 FDJ41_gp228 IPR027417 P-loop containing nucleoside triphosphate hydrolase FDJ41_gp228 IPR041546 ClpA/ClpB, AAA lid domain FDJ41_gp228 IPR028299 ClpA/B, conserved site 2 FDJ41_gp241 IPR002941 DNA methylase N-4/N-6 FDJ41_gp241 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FDJ41_gp241 IPR002052 DNA methylase, N-6 adenine-specific, conserved site FDJ41_gp241 IPR001091 Restriction/modification DNA-methylase FDJ41_gp261 IPR037124 GroES chaperonin superfamily FDJ41_gp261 IPR018369 Chaperonin GroES, conserved site FDJ41_gp261 IPR011032 GroES-like superfamily FDJ41_gp261 IPR020818 GroES chaperonin family FDJ41_gp265 IPR002421 5'-3' exonuclease, N-terminal FDJ41_gp265 IPR036279 5'-3' exonuclease, C-terminal domain superfamily FDJ41_gp265 IPR019760 DNA-directed DNA polymerase, family A, conserved site FDJ41_gp265 IPR001098 DNA-directed DNA polymerase, family A, palm domain FDJ41_gp265 IPR020045 DNA polymerase I-like, H3TH domain FDJ41_gp265 IPR018320 DNA polymerase 1 FDJ41_gp265 IPR002298 DNA polymerase A FDJ41_gp265 IPR008918 Helix-hairpin-helix motif, class 2 FDJ41_gp265 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal FDJ41_gp265 IPR036397 Ribonuclease H superfamily FDJ41_gp265 IPR029060 PIN-like domain superfamily FDJ41_gp296 IPR039718 Ribonucleoside-diphosphate reductase large subunit FDJ41_gp296 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal FDJ41_gp296 IPR013509 Ribonucleotide reductase large subunit, N-terminal FDJ41_gp296 IPR000788 Ribonucleotide reductase large subunit, C-terminal FDJ41_gp296 IPR013346 Ribonucleotide reductase, class I , alpha subunit FDJ41_gp296 IPR005144 ATP-cone domain FDJ41_gp298 IPR009078 Ferritin-like superfamily FDJ41_gp298 IPR012348 Ribonucleotide reductase-like FDJ41_gp298 IPR033909 Ribonucleotide reductase small subunit FDJ41_gp298 IPR030475 Ribonucleotide reductase small subunit, acitve site FDJ41_gp298 IPR000358 Ribonucleotide reductase small subunit family FDJ41_gp300 IPR009078 Ferritin-like superfamily FDJ41_gp300 IPR033909 Ribonucleotide reductase small subunit FDJ41_gp300 IPR000358 Ribonucleotide reductase small subunit family FDJ41_gp300 IPR012348 Ribonucleotide reductase-like FDJ41_gp300 IPR030475 Ribonucleotide reductase small subunit, acitve site FDJ41_gp308 IPR012259 Dihydrofolate reductase FDJ41_gp308 IPR024072 Dihydrofolate reductase-like domain superfamily FDJ41_gp308 IPR017925 Dihydrofolate reductase conserved site FDJ41_gp308 IPR001796 Dihydrofolate reductase domain FDJ41_gp309 IPR022892 Ribonuclease HI FDJ41_gp309 IPR036397 Ribonuclease H superfamily FDJ41_gp309 IPR002156 Ribonuclease H domain FDJ41_gp309 IPR012337 Ribonuclease H-like superfamily FDJ41_gp310 IPR006344 RecBCD enzyme subunit RecD FDJ41_gp310 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain FDJ41_gp310 IPR027785 UvrD-like helicase C-terminal domain FDJ41_gp310 IPR014001 Helicase superfamily 1/2, ATP-binding domain FDJ41_gp310 IPR027417 P-loop containing nucleoside triphosphate hydrolase FDJ41_gp310 IPR003593 AAA+ ATPase domain FDJ41_gp315 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like FDJ41_gp315 IPR022935 ATP-dependent Clp protease adaptor protein ClpS FDJ41_gp315 IPR003769 Adaptor protein ClpS, core FDJ41_gp320 IPR011557 DNA gyrase, subunit B FDJ41_gp320 IPR003594 Histidine kinase/HSP90-like ATPase FDJ41_gp320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FDJ41_gp320 IPR020568 Ribosomal protein S5 domain 2-type fold FDJ41_gp320 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 FDJ41_gp320 IPR001241 DNA topoisomerase, type IIA FDJ41_gp320 IPR013760 DNA topoisomerase, type IIA-like domain superfamily FDJ41_gp320 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal FDJ41_gp320 IPR002288 DNA gyrase B subunit, C-terminal FDJ41_gp320 IPR018522 DNA topoisomerase, type IIA, conserved site FDJ41_gp320 IPR006171 TOPRIM domain FDJ41_gp320 IPR034160 DNA gyrase subunit B, TOPRIM domain FDJ41_gp320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FDJ41_gp321 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta FDJ41_gp321 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily FDJ41_gp321 IPR013760 DNA topoisomerase, type IIA-like domain superfamily FDJ41_gp321 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat FDJ41_gp321 IPR005743 DNA gyrase, subunit A FDJ41_gp321 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal FDJ41_gp321 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal FDJ41_gp336 IPR008863 Toxic anion resistance FDJ41_gp360 IPR004821 Cytidyltransferase-like domain FDJ41_gp360 IPR010982 Lambda repressor-like, DNA-binding domain superfamily FDJ41_gp360 IPR016429 NAD biosynthesis/regulator protein NadR FDJ41_gp360 IPR038727 NadR/Ttd14, AAA domain FDJ41_gp360 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain FDJ41_gp360 IPR027417 P-loop containing nucleoside triphosphate hydrolase FDJ41_gp360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FDJ41_gp360 IPR001387 Cro/C1-type helix-turn-helix domain FDJ41_gp360 IPR006417 Nicotinamide-nucleotide adenylyltransferase FDJ41_gp361 IPR006419 Nicotinamide mononucleotide transporter PnuC FDJ41_gp402 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria FDJ41_gp402 IPR020458 Zinc finger, DksA/TraR C4-type conserved site FDJ41_gp402 IPR000962 Zinc finger, DksA/TraR C4-type FDJ41_gp405 IPR014284 RNA polymerase sigma-70 like domain FDJ41_gp405 IPR000943 RNA polymerase sigma-70 FDJ41_gp405 IPR007627 RNA polymerase sigma-70 region 2 FDJ41_gp405 IPR007624 RNA polymerase sigma-70 region 3 FDJ41_gp405 IPR007630 RNA polymerase sigma-70 region 4 FDJ41_gp405 IPR013325 RNA polymerase sigma factor, region 2 FDJ41_gp405 IPR013324 RNA polymerase sigma factor, region 3/4-like FDJ41_gp405 IPR012760 RNA polymerase sigma factor RpoD, C-terminal FDJ41_gp405 IPR028630 RNA polymerase sigma factor RpoD FDJ41_gp405 IPR036388 Winged helix-like DNA-binding domain superfamily FDJ41_gp462 IPR008640 Head domain of trimeric autotransporter adhesin FDJ41_gp462 IPR008635 Coiled stalk of trimeric autotransporter adhesin FDJ41_gp462 IPR008126 Outer membrane adhesion, Yersinia FDJ41_gp462 IPR005594 YadA-like, C-terminal FDJ41_gp462 IPR011049 Serralysin-like metalloprotease, C-terminal