locus-tag	class	description
DJ40_RS00010	COG0583	DNA-binding transcription factor activity
DJ40_RS00025	COG0791	NLP P60 protein
DJ40_RS00035	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DJ40_RS00045	COG0346	lactoylglutathione lyase activity
DJ40_RS00055	COG1902	pentaerythritol trinitrate reductase activity
DJ40_RS00060	COG1309	transcriptional regulator
DJ40_RS00065	COG2194	sulfuric ester hydrolase activity
DJ40_RS00070	COG3313	Fe-S protein
DJ40_RS00085	COG3133	Outer membrane lipoprotein
DJ40_RS00095	COG3895	Periplasmic Protein
DJ40_RS00115	COG0625	glutathione transferase activity
DJ40_RS00130	COG3104	oligopeptide transport
DJ40_RS00135	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DJ40_RS00135	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DJ40_RS00140	COG4172	Belongs to the ABC transporter superfamily
DJ40_RS00150	COG4171	peptide transport system, permease
DJ40_RS00155	COG4168	peptide transport system, permease
DJ40_RS00160	COG4166	transmembrane transport
DJ40_RS00170	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DJ40_RS00175	COG1842	Phage shock protein A
DJ40_RS00185	COG1983	PspC domain protein
DJ40_RS00195	COG3106	COG3106 Predicted ATPase
DJ40_RS00205	COG5654	RES domain protein
DJ40_RS00210	COG5642	Protein of unknown function (DUF2384)
DJ40_RS00220	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DJ40_RS00225	COG4948	Mandelate Racemase Muconate Lactonizing
DJ40_RS00230	COG2866	Carboxypeptidase
DJ40_RS00235	COG4166	transmembrane transport
DJ40_RS00255	COG0657	acetylesterase activity
DJ40_RS00265	COG0674	pyruvate-flavodoxin oxidoreductase activity
DJ40_RS00265	COG1013	pyruvate-flavodoxin oxidoreductase activity
DJ40_RS00265	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DJ40_RS00265	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJ40_RS00275	COG1285	pathogenesis
DJ40_RS00280	COG3042	response to heat
DJ40_RS00285	COG3187	Heat shock protein
DJ40_RS00290	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DJ40_RS00295	COG2911	Protein conserved in bacteria
DJ40_RS00305	COG3784	Protein of unknown function (DUF1318)
DJ40_RS00310	COG0246	Mannitol dehydrogenase
DJ40_RS00315	COG2390	Transcriptional regulator
DJ40_RS00325	COG1643	Atp-dependent helicase
DJ40_RS00340	COG3591	Belongs to the peptidase S1B family
DJ40_RS00355	COG3038	cytochrome b561
DJ40_RS00375	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DJ40_RS00380	COG2205	protein histidine kinase activity
DJ40_RS00385	COG0745	RESPONSE REGULATOR receiver
DJ40_RS00395	COG0531	amino acid
DJ40_RS00410	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DJ40_RS00415	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DJ40_RS00420	COG0589	response to stress
DJ40_RS00425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DJ40_RS00430	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DJ40_RS00450	COG1011	Hydrolase
DJ40_RS00455	COG0440	acetolactate synthase activity
DJ40_RS00460	COG0028	Belongs to the TPP enzyme family
DJ40_RS00485	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DJ40_RS00495	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJ40_RS00510	COG1129	ABC transporter
DJ40_RS00515	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS00520	COG1879	ABC-type sugar transport system periplasmic component
DJ40_RS00530	COG1609	Transcriptional regulator
DJ40_RS00535	COG1757	Na H antiporter
DJ40_RS00540	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DJ40_RS00565	COG3284	Transcriptional regulator
DJ40_RS00570	COG4221	oxidoreductase activity
DJ40_RS00590	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DJ40_RS00595	COG1940	carbohydrate kinase activity
DJ40_RS00600	COG2814	Major facilitator Superfamily
DJ40_RS00610	COG0114	fumarate hydratase activity
DJ40_RS00620	COG5339	Protein conserved in bacteria
DJ40_RS00630	COG0385	Bile acid
DJ40_RS00635	COG0673	inositol 2-dehydrogenase activity
DJ40_RS00645	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS00650	COG1129	ABC transporter
DJ40_RS00655	COG1879	ABC-type sugar transport system periplasmic component
DJ40_RS00670	COG2274	protein secretion by the type I secretion system
DJ40_RS00705	COG2207	Transcriptional regulator
DJ40_RS00705	COG3708	Transcriptional regulator
DJ40_RS00715	COG4659	FMN binding
DJ40_RS00725	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DJ40_RS00730	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ40_RS00735	COG2271	Major facilitator Superfamily
DJ40_RS00745	COG1966	Carbon starvation protein
DJ40_RS00750	COG2879	small protein
DJ40_RS00755	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DJ40_RS00775	COG0023	Translation Initiation Factor
DJ40_RS00790	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DJ40_RS00795	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
DJ40_RS00800	COG0671	phosphoesterase, PA-phosphatase related
DJ40_RS00810	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DJ40_RS00820	COG0583	DNA-binding transcription factor activity
DJ40_RS00840	COG0616	signal peptide processing
DJ40_RS00845	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS00855	COG1187	pseudouridine synthase activity
DJ40_RS00860	COG0009	L-threonylcarbamoyladenylate synthase
DJ40_RS00885	COG0512	Glutamine amidotransferase of anthranilate synthase
DJ40_RS00895	COG0135	phosphoribosylanthranilate isomerase activity
DJ40_RS00895	COG0134	indole-3-glycerol-phosphate synthase activity
DJ40_RS00915	COG3047	cAMP biosynthetic process
DJ40_RS00945	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DJ40_RS00950	COG2350	Protein conserved in bacteria
DJ40_RS00980	COG4608	Belongs to the ABC transporter superfamily
DJ40_RS00990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJ40_RS00995	COG0601	transmembrane transport
DJ40_RS01005	COG2095	MarC family integral membrane protein
DJ40_RS01010	COG1012	belongs to the aldehyde dehydrogenase family
DJ40_RS01010	COG1454	alcohol dehydrogenase
DJ40_RS01030	COG0745	RESPONSE REGULATOR receiver
DJ40_RS01040	COG0788	formyltetrahydrofolate deformylase activity
DJ40_RS01050	COG0583	DNA-binding transcription factor activity
DJ40_RS01055	COG0708	Exodeoxyribonuclease III
DJ40_RS01060	COG0494	nUDIX hydrolase
DJ40_RS01070	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DJ40_RS01080	COG0778	Nitroreductase
DJ40_RS01085	COG0616	signal peptide processing
DJ40_RS01090	COG0252	asparaginase activity
DJ40_RS01095	COG1335	isochorismatase
DJ40_RS01100	COG3139	Protein of unknown function (DUF1315)
DJ40_RS01120	COG3713	MltA-interacting MipA family protein
DJ40_RS01125	COG2766	serine protein kinase
DJ40_RS01140	COG0583	DNA-binding transcription factor activity
DJ40_RS01150	COG2814	Major facilitator Superfamily
DJ40_RS01160	COG2719	SpoVR family
DJ40_RS01195	COG1104	cysteine desulfurase activity
DJ40_RS01210	COG0179	Fumarylacetoacetate (FAA) hydrolase
DJ40_RS01215	COG2951	lytic endotransglycosylase activity
DJ40_RS01230	COG2894	cell division
DJ40_RS01235	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
DJ40_RS01240	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
DJ40_RS01245	COG0318	PFAM AMP-dependent synthetase and ligase
DJ40_RS01250	COG3065	identical protein binding
DJ40_RS01260	COG1199	ATP-dependent helicase activity
DJ40_RS01265	COG0251	oxidation-reduction process
DJ40_RS01280	COG0800	Aldolase
DJ40_RS01290	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DJ40_RS01295	COG1737	Transcriptional regulator
DJ40_RS01300	COG0469	pyruvate kinase activity
DJ40_RS01305	COG1560	Kdo2-lipid A biosynthetic process
DJ40_RS01310	COG0739	heme binding
DJ40_RS01315	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DJ40_RS01325	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJ40_RS01350	COG0494	nUDIX hydrolase
DJ40_RS01360	COG1801	Protein of unknown function DUF72
DJ40_RS01365	COG3788	relative of glutathione S-transferase, MAPEG superfamily
DJ40_RS01385	COG3102	Protein conserved in bacteria
DJ40_RS01405	COG0728	peptidoglycan biosynthetic process
DJ40_RS01410	COG0673	inositol 2-dehydrogenase activity
DJ40_RS01420	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ40_RS01435	COG3381	protein complex oligomerization
DJ40_RS01450	COG1940	carbohydrate kinase activity
DJ40_RS01455	COG0584	glycerophosphoryl diester phosphodiesterase
DJ40_RS01465	COG1176	ABC-type spermidine putrescine transport system, permease component I
DJ40_RS01470	COG3833	ABC-type maltose transport systems, permease component
DJ40_RS01495	COG0659	secondary active sulfate transmembrane transporter activity
DJ40_RS01515	COG2890	protein-(glutamine-N5) methyltransferase activity
DJ40_RS01545	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DJ40_RS01565	COG0012	GTP binding
DJ40_RS01595	COG5002	protein histidine kinase activity
DJ40_RS01635	COG0500	methyltransferase
DJ40_RS01700	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ40_RS01705	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ40_RS01720	COG0402	S-adenosylhomocysteine deaminase activity
DJ40_RS01775	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ40_RS01780	COG3850	Histidine kinase
DJ40_RS01785	COG0387	Pfam Sodium calcium exchanger
DJ40_RS01790	COG1702	phosphate starvation-inducible protein PhoH
DJ40_RS01805	COG3658	cytochrome
DJ40_RS01810	COG1215	transferase activity, transferring glycosyl groups
DJ40_RS01815	COG0726	polysaccharide deacetylase
DJ40_RS01815	COG1649	PFAM Uncharacterised BCR, COG1649
DJ40_RS01820	COG0457	Tetratricopeptide repeat
DJ40_RS01825	COG0006	proline dipeptidase activity
DJ40_RS01845	COG0577	efflux transmembrane transporter activity
DJ40_RS01845	COG1136	(ABC) transporter
DJ40_RS01855	COG1136	(ABC) transporter
DJ40_RS01855	COG0577	efflux transmembrane transporter activity
DJ40_RS01870	COG0672	)-iron permease
DJ40_RS01880	COG2066	Belongs to the glutaminase family
DJ40_RS01885	COG1349	DNA-binding transcription factor activity
DJ40_RS01895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ40_RS01900	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
DJ40_RS01915	COG2814	Major facilitator Superfamily
DJ40_RS01940	COG2030	dehydratase
DJ40_RS01955	COG2205	protein histidine kinase activity
DJ40_RS01955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS01970	COG3188	usher protein
DJ40_RS01980	COG3121	Chaperone
DJ40_RS01995	COG3842	ATPase activity
DJ40_RS02000	COG0395	ABC-type sugar transport system, permease component
DJ40_RS02005	COG1175	transmembrane transport
DJ40_RS02015	COG0673	inositol 2-dehydrogenase activity
DJ40_RS02025	COG2188	Transcriptional regulator
DJ40_RS02125	COG4974	Belongs to the 'phage' integrase family
DJ40_RS02180	COG5002	protein histidine kinase activity
DJ40_RS02180	COG2176	DNA-directed DNA polymerase activity
DJ40_RS02215	COG4695	Portal protein
DJ40_RS02390	COG3136	membrane protein required for alginate biosynthesis
DJ40_RS02410	COG1113	amino acid transport
DJ40_RS02430	COG2822	iron ion transport
DJ40_RS02435	COG0672	)-iron permease
DJ40_RS02450	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DJ40_RS02450	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DJ40_RS02450	COG0506	proline dehydrogenase activity
DJ40_RS02465	COG1126	abc transporter atp-binding protein
DJ40_RS02470	COG0765	amino acid transport
DJ40_RS02475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS02490	COG1191	sigma factor activity
DJ40_RS02525	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
DJ40_RS02530	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DJ40_RS02545	COG1677	Flagellar hook-basal body complex protein FliE
DJ40_RS02565	COG1157	protein secretion by the type III secretion system
DJ40_RS02580	COG1580	Controls the rotational direction of flagella during chemotaxis
DJ40_RS02605	COG1987	bacterial-type flagellum assembly
DJ40_RS02620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ40_RS02625	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS02630	COG1129	ABC transporter
DJ40_RS02640	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS02645	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS02645	COG3347	Dehydrogenase
DJ40_RS02650	COG2390	Transcriptional regulator
DJ40_RS02660	COG1256	bacterial-type flagellum assembly
DJ40_RS02700	COG1558	bacterial-type flagellum-dependent cell motility
DJ40_RS02705	COG1815	bacterial-type flagellum-dependent cell motility
DJ40_RS02715	COG2747	anti-sigma28 factor FlgM
DJ40_RS02720	COG3418	PFAM FlgN family protein
DJ40_RS02740	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJ40_RS02745	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJ40_RS02775	COG2372	response to copper ion
DJ40_RS02780	COG1528	Iron-storage protein
DJ40_RS02795	COG1770	oligopeptidase
DJ40_RS02810	COG3141	response to X-ray
DJ40_RS02815	COG0513	Belongs to the DEAD box helicase family
DJ40_RS02840	COG1760	l-serine dehydratase
DJ40_RS02845	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DJ40_RS02850	COG2368	4-hydroxyphenylacetate
DJ40_RS02865	COG3971	2-oxopent-4-enoate hydratase activity
DJ40_RS02875	COG3384	dioxygenase
DJ40_RS02880	COG1012	belongs to the aldehyde dehydrogenase family
DJ40_RS02895	COG1846	Transcriptional regulator
DJ40_RS02900	COG1253	flavin adenine dinucleotide binding
DJ40_RS02905	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ40_RS02905	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ40_RS02910	COG3715	PTS system
DJ40_RS02915	COG3716	PTS system mannose fructose sorbose family IID component
DJ40_RS02935	COG3447	MASE1 domain protein
DJ40_RS02935	COG5001	Diguanylate cyclase
DJ40_RS02935	COG5002	protein histidine kinase activity
DJ40_RS02945	COG2226	methyltransferase
DJ40_RS02950	COG1496	oxidoreductase activity
DJ40_RS02975	COG1113	amino acid transport
DJ40_RS03010	COG2207	Transcriptional regulator
DJ40_RS03020	COG1132	(ABC) transporter
DJ40_RS03050	COG2223	nitrite transmembrane transporter activity
DJ40_RS03070	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DJ40_RS03095	COG3122	Protein conserved in bacteria
DJ40_RS03115	COG0534	Mate efflux family protein
DJ40_RS03130	COG4948	Mandelate Racemase Muconate Lactonizing
DJ40_RS03140	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS03145	COG3011	Protein conserved in bacteria
DJ40_RS03150	COG2271	Major facilitator Superfamily
DJ40_RS03155	COG1388	LysM domain
DJ40_RS03155	COG1470	cell adhesion involved in biofilm formation
DJ40_RS03170	COG2925	Exonuclease
DJ40_RS03175	COG0531	amino acid
DJ40_RS03185	COG0371	Dehydrogenase
DJ40_RS03190	COG1129	ABC transporter
DJ40_RS03195	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS03210	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ40_RS03220	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DJ40_RS03250	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DJ40_RS03250	COG0140	phosphoribosyl-ATP diphosphatase activity
DJ40_RS03260	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DJ40_RS03265	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DJ40_RS03280	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ40_RS03285	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ40_RS03290	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ40_RS03295	COG1120	ATPase activity
DJ40_RS03310	COG3486	L-lysine 6-monooxygenase (NADPH) activity
DJ40_RS03315	COG0076	glutamate decarboxylase activity
DJ40_RS03320	COG4114	ferric iron reductase
DJ40_RS03325	COG1253	flavin adenine dinucleotide binding
DJ40_RS03330	COG2982	Protein involved in outer membrane biogenesis
DJ40_RS03345	COG0489	protein tyrosine kinase activity
DJ40_RS03370	COG2814	Major facilitator Superfamily
DJ40_RS03380	COG1346	cytolysis
DJ40_RS03395	COG2949	membrane
DJ40_RS03400	COG4211	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS03415	COG2311	Membrane
DJ40_RS03425	COG0477	Major facilitator Superfamily
DJ40_RS03430	COG0583	DNA-binding transcription factor activity
DJ40_RS03460	COG1136	(ABC) transporter
DJ40_RS03470	COG0303	'Molybdopterin
DJ40_RS03485	COG0488	(ABC) transporter
DJ40_RS03635	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DJ40_RS03640	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DJ40_RS03650	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS03655	COG1024	Enoyl-CoA hydratase
DJ40_RS03665	COG3425	synthase
DJ40_RS03670	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS03675	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJ40_RS03680	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DJ40_RS03690	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS03725	COG2920	part of a sulfur-relay system
DJ40_RS03745	COG1832	CoA-binding protein
DJ40_RS03760	COG0210	DNA helicase
DJ40_RS03765	COG3304	Inner membrane component domain
DJ40_RS03770	COG1289	transmembrane transporter activity
DJ40_RS03775	COG3070	regulator of competence-specific genes
DJ40_RS03795	COG1067	ATP-dependent peptidase activity
DJ40_RS03810	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJ40_RS03815	COG3130	regulation of translation
DJ40_RS03825	COG3009	Protein conserved in bacteria
DJ40_RS03830	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DJ40_RS03830	COG3008	intermembrane lipid transfer
DJ40_RS03835	COG2995	paraquat-inducible protein a
DJ40_RS03840	COG0488	(ABC) transporter
DJ40_RS03850	COG3217	Mosc domain protein beta barrel domain protein
DJ40_RS03850	COG0633	Ferredoxin
DJ40_RS03865	COG0308	aminopeptidase N
DJ40_RS03890	COG1448	Aminotransferase
DJ40_RS03895	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ40_RS03900	COG3108	Peptidase M15
DJ40_RS03905	COG2989	Protein conserved in bacteria
DJ40_RS03925	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DJ40_RS03935	COG3173	Aminoglycoside phosphotransferase
DJ40_RS03950	COG1278	Cold shock
DJ40_RS03975	COG2333	competence protein COMEC
DJ40_RS03975	COG0658	competence protein
DJ40_RS03990	COG0539	negative regulation of cytoplasmic translation
DJ40_RS04020	COG0252	asparaginase activity
DJ40_RS04025	COG1944	ATP diphosphatase activity
DJ40_RS04030	COG2116	formate transmembrane transporter activity
DJ40_RS04035	COG1882	Formate acetyltransferase
DJ40_RS04045	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DJ40_RS04060	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DJ40_RS04070	COG3107	peptidoglycan biosynthetic process
DJ40_RS04070	COG1674	ftsk spoiiie
DJ40_RS04080	COG0492	ferredoxin-NADP+ reductase activity
DJ40_RS04095	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DJ40_RS04105	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DJ40_RS04110	COG0542	response to heat
DJ40_RS04120	COG1278	Cold shock
DJ40_RS04130	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJ40_RS04135	COG2990	Protein conserved in bacteria
DJ40_RS04140	COG3593	DNA synthesis involved in DNA repair
DJ40_RS04145	COG2431	L-lysine efflux transmembrane transporter activity
DJ40_RS04155	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJ40_RS04160	COG0028	Belongs to the TPP enzyme family
DJ40_RS04165	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DJ40_RS04170	COG0702	epimerase
DJ40_RS04175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ40_RS04185	COG1605	Chorismate mutase
DJ40_RS04190	COG1126	abc transporter atp-binding protein
DJ40_RS04195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS04200	COG4215	(ABC) transporter
DJ40_RS04205	COG4160	amino acid transport
DJ40_RS04225	COG1120	ATPase activity
DJ40_RS04230	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ40_RS04250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS04265	COG1177	transmembrane transport
DJ40_RS04270	COG1176	ABC-type spermidine putrescine transport system, permease component I
DJ40_RS04275	COG3842	ATPase activity
DJ40_RS04280	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DJ40_RS04315	COG0671	phosphoesterase, PA-phosphatase related
DJ40_RS04325	COG1349	DNA-binding transcription factor activity
DJ40_RS04330	COG0814	amino acid
DJ40_RS04340	COG1686	Belongs to the peptidase S11 family
DJ40_RS04345	COG2011	ABC-type metal ion transport system permease component
DJ40_RS04370	COG0625	glutathione transferase activity
DJ40_RS04375	COG4771	TonB-dependent receptor
DJ40_RS04385	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ40_RS04395	COG0833	amino acid
DJ40_RS04400	COG0583	DNA-binding transcription factor activity
DJ40_RS04405	COG2855	membrane
DJ40_RS04415	COG3188	usher protein
DJ40_RS04420	COG3121	Chaperone
DJ40_RS04435	COG3710	Transcriptional regulator
DJ40_RS04440	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJ40_RS04440	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJ40_RS04440	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DJ40_RS04445	COG1105	Belongs to the carbohydrate kinase PfkB family
DJ40_RS04455	COG0494	nUDIX hydrolase
DJ40_RS04465	COG1129	ABC transporter
DJ40_RS04500	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS04525	COG0246	Mannitol dehydrogenase
DJ40_RS04530	COG2186	Transcriptional regulator
DJ40_RS04540	COG0523	cobalamin synthesis protein
DJ40_RS04545	COG0671	phosphoesterase, PA-phosphatase related
DJ40_RS04550	COG0791	NLP P60 protein
DJ40_RS04555	COG2200	EAL domain
DJ40_RS04560	COG4166	transmembrane transport
DJ40_RS04565	COG4174	ABC transporter (Permease)
DJ40_RS04570	COG4239	(ABC) transporter, permease
DJ40_RS04575	COG4172	Belongs to the ABC transporter superfamily
DJ40_RS04585	COG2814	Major facilitator Superfamily
DJ40_RS04590	COG1187	pseudouridine synthase activity
DJ40_RS04595	COG1061	Type III restriction enzyme res subunit
DJ40_RS04615	COG3082	Protein of unknown function (DUF1414)
DJ40_RS04620	COG3083	sulfuric ester hydrolase activity
DJ40_RS04665	COG2723	6-phospho-beta-galactosidase activity
DJ40_RS04670	COG1737	Transcriptional regulator
DJ40_RS04690	COG3299	homolog of phage Mu protein gp47
DJ40_RS04735	COG4386	tail sheath protein
DJ40_RS04755	COG3622	Belongs to the hyi family
DJ40_RS04760	COG1349	DNA-binding transcription factor activity
DJ40_RS04765	COG0235	Class ii aldolase
DJ40_RS04770	COG3395	kinase activity
DJ40_RS04815	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DJ40_RS04850	COG2223	nitrite transmembrane transporter activity
DJ40_RS04855	COG2198	Histidine kinase
DJ40_RS04855	COG0642	Histidine kinase
DJ40_RS04865	COG2205	protein histidine kinase activity
DJ40_RS04865	COG0784	Response regulator, receiver
DJ40_RS04895	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJ40_RS04910	COG0814	amino acid
DJ40_RS04935	COG0697	spore germination
DJ40_RS04945	COG1982	Orn Lys Arg decarboxylase major
DJ40_RS04950	COG0531	amino acid
DJ40_RS04955	COG1174	glycine betaine transport
DJ40_RS04960	COG1125	glycine betaine transport
DJ40_RS04965	COG1174	glycine betaine transport
DJ40_RS04970	COG1732	Glycine betaine
DJ40_RS04975	COG2897	thiosulfate sulfurtransferase activity
DJ40_RS04995	COG1122	ATPase activity
DJ40_RS05015	COG4807	Protein conserved in bacteria
DJ40_RS05030	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DJ40_RS05040	COG2261	transglycosylase associated protein
DJ40_RS05060	COG0277	FAD linked oxidase domain protein
DJ40_RS05065	COG1686	Belongs to the peptidase S11 family
DJ40_RS05075	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJ40_RS05090	COG0513	Belongs to the DEAD box helicase family
DJ40_RS05095	COG1309	transcriptional regulator
DJ40_RS05105	COG1131	(ABC) transporter
DJ40_RS05110	COG0842	Transport permease protein
DJ40_RS05115	COG0842	Transport permease protein
DJ40_RS05135	COG1902	pentaerythritol trinitrate reductase activity
DJ40_RS05155	COG2211	Major facilitator Superfamily
DJ40_RS05160	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DJ40_RS05170	COG0583	DNA-binding transcription factor activity
DJ40_RS05175	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DJ40_RS05195	COG0670	Belongs to the BI1 family
DJ40_RS05200	COG0314	molybdopterin synthase activity
DJ40_RS05205	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DJ40_RS05215	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DJ40_RS05225	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DJ40_RS05230	COG4628	conserved protein (DUF2132)
DJ40_RS05240	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DJ40_RS05250	COG2226	methyltransferase
DJ40_RS05275	COG0561	phosphatase activity
DJ40_RS05285	COG4149	molybdate abc transporter
DJ40_RS05290	COG0725	ABC transporter, periplasmic molybdate-binding protein
DJ40_RS05300	COG2005	Transcriptional regulator
DJ40_RS05300	COG3585	molybdate ion transport
DJ40_RS05305	COG1119	ATPase activity
DJ40_RS05320	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DJ40_RS05325	COG1085	galactose-1-phosphate uridylyltransferase
DJ40_RS05335	COG2017	converts alpha-aldose to the beta-anomer
DJ40_RS05350	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DJ40_RS05355	COG1230	cation diffusion facilitator family transporter
DJ40_RS05385	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DJ40_RS05390	COG2885	chlorophyll binding
DJ40_RS05400	COG3064	Membrane
DJ40_RS05400	COG3064	Membrane
DJ40_RS05405	COG0848	biopolymer transport protein
DJ40_RS05410	COG0811	peptide transport
DJ40_RS05415	COG0824	Thioesterase
DJ40_RS05420	COG3790	cyd operon protein YbgE
DJ40_RS05425	COG4890	Cyd operon protein YbgT
DJ40_RS05430	COG1294	oxidase, subunit
DJ40_RS05435	COG1271	oxidase subunit
DJ40_RS05440	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DJ40_RS05450	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJ40_RS05455	COG0567	Dehydrogenase, E1 component
DJ40_RS05465	COG1053	succinate dehydrogenase
DJ40_RS05470	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DJ40_RS05475	COG2009	succinate dehydrogenase
DJ40_RS05490	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DJ40_RS05495	COG0497	DNA recombination
DJ40_RS05500	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DJ40_RS05510	COG2867	negative regulation of translational initiation
DJ40_RS05520	COG0582	viral genome integration into host DNA
DJ40_RS05580	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DJ40_RS05585	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DJ40_RS05625	COG0582	viral genome integration into host DNA
DJ40_RS05630	COG2963	transposase activity
DJ40_RS05635	COG0582	viral genome integration into host DNA
DJ40_RS05645	COG0596	Alpha beta hydrolase
DJ40_RS05665	COG0735	belongs to the Fur family
DJ40_RS05690	COG2190	(PTS) system
DJ40_RS05690	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ40_RS05690	COG1263	PTS System
DJ40_RS05700	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DJ40_RS05705	COG1940	carbohydrate kinase activity
DJ40_RS05705	COG1846	Transcriptional regulator
DJ40_RS05710	COG0647	UMP catabolic process
DJ40_RS05715	COG0367	asparagine synthase
DJ40_RS05755	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJ40_RS05765	COG1702	phosphate starvation-inducible protein PhoH
DJ40_RS05775	COG4535	Mg2 and Co2 transporter CorC
DJ40_RS05780	COG0815	Transfers the fatty acyl group on membrane lipoproteins
DJ40_RS05790	COG0765	amino acid transport
DJ40_RS05795	COG0765	amino acid transport
DJ40_RS05800	COG1126	abc transporter atp-binding protein
DJ40_RS05805	COG2888	peptidyl-tyrosine sulfation
DJ40_RS05820	COG1466	dna polymerase III delta subunit
DJ40_RS05830	COG0799	negative regulation of ribosome biogenesis
DJ40_RS05840	COG0768	penicillin binding
DJ40_RS05845	COG0772	Belongs to the SEDS family
DJ40_RS05850	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DJ40_RS05855	COG1686	Belongs to the peptidase S11 family
DJ40_RS05875	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DJ40_RS05895	COG1278	Cold shock
DJ40_RS05900	COG2197	response regulator
DJ40_RS05925	COG5265	(ABC) transporter
DJ40_RS05935	COG3718	enzyme involved in inositol metabolism
DJ40_RS05945	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ40_RS05950	COG0673	inositol 2-dehydrogenase activity
DJ40_RS05955	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS05960	COG1129	ABC transporter
DJ40_RS05970	COG0673	inositol 2-dehydrogenase activity
DJ40_RS05975	COG3962	Belongs to the TPP enzyme family
DJ40_RS05990	COG2373	Large extracellular alpha-helical protein
DJ40_RS05995	COG4953	penicillin-binding protein 1C
DJ40_RS06000	COG3423	Transcriptional regulator
DJ40_RS06040	COG2850	peptidyl-arginine hydroxylation
DJ40_RS06045	COG1187	pseudouridine synthase activity
DJ40_RS06060	COG1472	Belongs to the glycosyl hydrolase 3 family
DJ40_RS06080	COG0656	L-ascorbic acid biosynthetic process
DJ40_RS06085	COG0667	Aldo Keto reductase
DJ40_RS06105	COG2453	phosphatase
DJ40_RS06105	COG0671	phosphoesterase, PA-phosphatase related
DJ40_RS06110	COG2267	carboxylic ester hydrolase activity
DJ40_RS06120	COG4589	Belongs to the CDS family
DJ40_RS06125	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DJ40_RS06180	COG2003	Belongs to the UPF0758 family
DJ40_RS06215	COG3596	GTP binding
DJ40_RS06245	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DJ40_RS06270	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DJ40_RS06275	COG1061	Type III restriction enzyme res subunit
DJ40_RS06280	COG1002	Type II restriction enzyme, methylase subunits
DJ40_RS06285	COG0582	viral genome integration into host DNA
DJ40_RS06300	COG2501	S4 domain
DJ40_RS06310	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DJ40_RS06320	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DJ40_RS06325	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DJ40_RS06330	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DJ40_RS06335	COG4181	ATPase activity
DJ40_RS06340	COG2755	lipolytic protein G-D-S-L family
DJ40_RS06345	COG0300	oxidoreductase activity
DJ40_RS06350	COG3118	belongs to the thioredoxin family
DJ40_RS06355	COG0330	HflC and HflK could
DJ40_RS06360	COG1585	Membrane protein implicated in regulation of membrane protease activity
DJ40_RS06365	COG0789	Transcriptional regulator
DJ40_RS06370	COG2217	Heavy metal translocating P-type atpase
DJ40_RS06375	COG3735	TraB family
DJ40_RS06380	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DJ40_RS06400	COG5301	cellulose 1,4-beta-cellobiosidase activity
DJ40_RS06455	COG4386	tail sheath protein
DJ40_RS06585	COG0582	viral genome integration into host DNA
DJ40_RS06630	COG3179	chitinase
DJ40_RS06655	COG1403	HNH endonuclease
DJ40_RS06665	COG0582	viral genome integration into host DNA
DJ40_RS06675	COG2223	nitrite transmembrane transporter activity
DJ40_RS06680	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DJ40_RS06680	COG4651	solute:proton antiporter activity
DJ40_RS06685	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ40_RS06690	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DJ40_RS06695	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DJ40_RS06720	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ40_RS06720	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DJ40_RS06735	COG0438	transferase activity, transferring glycosyl groups
DJ40_RS06745	COG2244	polysaccharide biosynthetic process
DJ40_RS06755	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ40_RS06775	COG0543	2 iron, 2 sulfur cluster binding
DJ40_RS06775	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJ40_RS06805	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DJ40_RS06830	COG3264	Mechanosensitive ion channel
DJ40_RS06830	COG1196	nuclear chromosome segregation
DJ40_RS06835	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DJ40_RS06840	COG1309	transcriptional regulator
DJ40_RS06845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJ40_RS06850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJ40_RS06860	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DJ40_RS06880	COG3695	enzyme binding
DJ40_RS06885	COG3126	Type III secretion system lipoprotein chaperone (YscW)
DJ40_RS06890	COG1946	Acyl-CoA thioesterase
DJ40_RS06895	COG0004	ammonium transporteR
DJ40_RS06900	COG0347	Belongs to the P(II) protein family
DJ40_RS06905	COG1132	(ABC) transporter
DJ40_RS06910	COG1132	(ABC) transporter
DJ40_RS06915	COG1522	sequence-specific DNA binding
DJ40_RS06930	COG4533	DNA binding
DJ40_RS06940	COG0824	Thioesterase
DJ40_RS06945	COG1555	photosystem II stabilization
DJ40_RS06950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DJ40_RS06955	COG0776	regulation of translation
DJ40_RS06960	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DJ40_RS06985	COG0271	Belongs to the BolA IbaG family
DJ40_RS06990	COG3056	Lipoprotein
DJ40_RS06995	COG2223	nitrite transmembrane transporter activity
DJ40_RS07005	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DJ40_RS07010	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DJ40_RS07015	COG1845	cytochrome c oxidase, subunit III
DJ40_RS07020	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DJ40_RS07030	COG2814	Major facilitator Superfamily
DJ40_RS07040	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DJ40_RS07045	COG0693	protein deglycase activity
DJ40_RS07065	COG0142	geranyltranstransferase activity
DJ40_RS07075	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DJ40_RS07080	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DJ40_RS07095	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DJ40_RS07095	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DJ40_RS07120	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DJ40_RS07125	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DJ40_RS07130	COG1862	Preprotein translocase
DJ40_RS07150	COG0450	alkyl hydroperoxide reductase
DJ40_RS07170	COG0366	Alpha amylase catalytic
DJ40_RS07190	COG5002	protein histidine kinase activity
DJ40_RS07195	COG0745	RESPONSE REGULATOR receiver
DJ40_RS07205	COG0420	3'-5' exonuclease activity
DJ40_RS07210	COG0419	ATPase involved in DNA repair
DJ40_RS07215	COG1940	carbohydrate kinase activity
DJ40_RS07250	COG2226	methyltransferase
DJ40_RS07315	COG2195	Cleaves the N-terminal amino acid of tripeptides
DJ40_RS07335	COG1477	protein flavinylation
DJ40_RS07355	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
DJ40_RS07360	COG1805	sodium ion transport
DJ40_RS07370	COG3034	peptidoglycan biosynthetic process
DJ40_RS07375	COG0121	glutamine amidotransferase
DJ40_RS07385	COG1960	acyl-CoA dehydrogenase activity
DJ40_RS07395	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
DJ40_RS07470	COG0582	viral genome integration into host DNA
DJ40_RS07475	COG0436	Aminotransferase
DJ40_RS07490	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DJ40_RS07500	COG0765	amino acid transport
DJ40_RS07540	COG2814	Major facilitator Superfamily
DJ40_RS07545	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DJ40_RS07555	COG1846	Transcriptional regulator
DJ40_RS07560	COG1566	PFAM secretion protein HlyD family protein
DJ40_RS07565	COG2814	Major facilitator Superfamily
DJ40_RS07570	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJ40_RS07575	COG3118	belongs to the thioredoxin family
DJ40_RS07580	COG3148	PFAM DTW domain containing protein
DJ40_RS07585	COG0045	succinate-CoA ligase (ADP-forming) activity
DJ40_RS07585	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ40_RS07585	COG1042	CoA-binding domain protein
DJ40_RS07590	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJ40_RS07595	COG5544	Lipoprotein
DJ40_RS07625	COG0542	response to heat
DJ40_RS07635	COG0564	pseudouridine synthase activity
DJ40_RS07640	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DJ40_RS07645	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DJ40_RS07650	COG0077	Prephenate dehydratase
DJ40_RS07650	COG1605	Chorismate mutase
DJ40_RS07655	COG0287	Prephenate dehydrogenase
DJ40_RS07655	COG1605	Chorismate mutase
DJ40_RS07660	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DJ40_RS07665	COG3279	Response regulator of the LytR AlgR family
DJ40_RS07670	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DJ40_RS07675	COG3137	Salt-induced outer membrane protein
DJ40_RS07700	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DJ40_RS07705	COG4137	Cytochrome C assembly protein
DJ40_RS07710	COG4536	flavin adenine dinucleotide binding
DJ40_RS07725	COG1238	metal cluster binding
DJ40_RS07730	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJ40_RS07755	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DJ40_RS07795	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DJ40_RS07800	COG3958	Transketolase
DJ40_RS07805	COG3959	Transketolase, thiamine diphosphate binding domain
DJ40_RS07810	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS07815	COG1129	ABC transporter
DJ40_RS07825	COG1879	ABC-type sugar transport system periplasmic component
DJ40_RS07835	COG3783	Cytochrome b(562)
DJ40_RS07840	COG3038	cytochrome b561
DJ40_RS07845	COG3381	protein complex oligomerization
DJ40_RS07850	COG3302	dmso reductase anchor subunit
DJ40_RS07855	COG0437	4 iron, 4 sulfur cluster binding
DJ40_RS07860	COG0243	molybdopterin cofactor binding
DJ40_RS07865	COG0235	Class ii aldolase
DJ40_RS07870	COG1349	DNA-binding transcription factor activity
DJ40_RS07880	COG1129	ABC transporter
DJ40_RS07885	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS07890	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS07895	COG3623	hexulose-6-phosphate isomerase
DJ40_RS07900	COG1070	Carbohydrate kinase
DJ40_RS07905	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DJ40_RS07905	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DJ40_RS07915	COG0024	Methionine aminopeptidase
DJ40_RS07930	COG4771	TonB-dependent receptor
DJ40_RS07940	COG1858	cytochrome C peroxidase
DJ40_RS07945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS07965	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DJ40_RS07980	COG2376	Dihydroxyacetone kinase
DJ40_RS07985	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS07990	COG1063	alcohol dehydrogenase
DJ40_RS07995	COG0698	ribose 5-phosphate isomerase
DJ40_RS08010	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DJ40_RS08015	COG4942	peptidase
DJ40_RS08015	COG1388	LysM domain
DJ40_RS08055	COG0529	Catalyzes the synthesis of activated sulfate
DJ40_RS08110	COG0720	synthase
DJ40_RS08115	COG0602	queuosine metabolic process
DJ40_RS08135	COG3956	TIGRFAM MazG family protein
DJ40_RS08145	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DJ40_RS08150	COG2205	protein histidine kinase activity
DJ40_RS08150	COG3850	Histidine kinase
DJ40_RS08150	COG3437	response regulator, receiver
DJ40_RS08150	COG4999	Histidine kinase
DJ40_RS08155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJ40_RS08175	COG2860	membrane
DJ40_RS08195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ40_RS08200	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ40_RS08210	COG1120	ATPase activity
DJ40_RS08215	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DJ40_RS08220	COG1643	Atp-dependent helicase
DJ40_RS08225	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DJ40_RS08245	COG0617	tRNA 3'-terminal CCA addition
DJ40_RS08250	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DJ40_RS08270	COG0726	polysaccharide deacetylase
DJ40_RS08275	COG0842	Transport permease protein
DJ40_RS08280	COG1131	(ABC) transporter
DJ40_RS08285	COG0288	reversible hydration of carbon dioxide
DJ40_RS08290	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DJ40_RS08295	COG2132	Multicopper oxidase
DJ40_RS08315	COG0697	spore germination
DJ40_RS08325	COG1049	propionate catabolic process, 2-methylcitrate cycle
DJ40_RS08330	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJ40_RS08335	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJ40_RS08340	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DJ40_RS08345	COG2186	Transcriptional regulator
DJ40_RS08350	COG1113	amino acid transport
DJ40_RS08355	COG3725	Membrane protein required for beta-lactamase induction
DJ40_RS08360	COG3023	N-Acetylmuramoyl-L-alanine amidase
DJ40_RS08370	COG4969	Belongs to the N-Me-Phe pilin family
DJ40_RS08375	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DJ40_RS08380	COG1459	type II secretion system
DJ40_RS08410	COG0494	nUDIX hydrolase
DJ40_RS08435	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DJ40_RS08440	COG0849	cell division
DJ40_RS08445	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DJ40_RS08465	COG0772	Belongs to the SEDS family
DJ40_RS08480	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DJ40_RS08485	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DJ40_RS08490	COG0768	penicillin binding
DJ40_RS08495	COG3116	cell division
DJ40_RS08515	COG1609	Transcriptional regulator
DJ40_RS08530	COG0028	Belongs to the TPP enzyme family
DJ40_RS08540	COG1022	Amp-dependent synthetase and ligase
DJ40_RS08565	COG0473	3-isopropylmalate dehydrogenase activity
DJ40_RS08580	COG2814	Major facilitator Superfamily
DJ40_RS08600	COG4143	(ABC) transporter
DJ40_RS08605	COG1178	ABC-type Fe3 transport system permease component
DJ40_RS08610	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
DJ40_RS08615	COG0586	Pfam SNARE associated Golgi protein
DJ40_RS08620	COG0417	DNA replication proofreading
DJ40_RS08640	COG3047	cAMP biosynthetic process
DJ40_RS08640	COG2885	chlorophyll binding
DJ40_RS08725	COG0564	pseudouridine synthase activity
DJ40_RS08775	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DJ40_RS08785	COG2966	Psort location CytoplasmicMembrane, score
DJ40_RS08795	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DJ40_RS08820	COG1047	Peptidyl-prolyl cis-trans
DJ40_RS08835	COG0196	riboflavin kinase activity
DJ40_RS08850	COG0583	DNA-binding transcription factor activity
DJ40_RS08870	COG1584	GPR1 FUN34 yaaH family protein
DJ40_RS08895	COG0521	Mo-molybdopterin cofactor biosynthetic process
DJ40_RS08925	COG0745	RESPONSE REGULATOR receiver
DJ40_RS08930	COG3045	CreA protein
DJ40_RS08935	COG2207	Transcriptional regulator
DJ40_RS08935	COG3708	Transcriptional regulator
DJ40_RS08950	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
DJ40_RS08955	COG0741	lytic transglycosylase activity
DJ40_RS08970	COG2199	diguanylate cyclase activity
DJ40_RS08975	COG2885	chlorophyll binding
DJ40_RS08980	COG0488	(ABC) transporter
DJ40_RS09000	COG0560	Phosphoserine phosphatase
DJ40_RS09005	COG3726	membrane protein affecting hemolysin expression
DJ40_RS09030	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ40_RS09035	COG0084	hydrolase, TatD family'
DJ40_RS09040	COG4667	esterase of the alpha-beta hydrolase superfamily
DJ40_RS09050	COG2823	Periplasmic or secreted lipoprotein
DJ40_RS09060	COG0456	acetyltransferase
DJ40_RS09065	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
DJ40_RS09120	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJ40_RS09125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJ40_RS09145	COG0859	PFAM glycosyl transferase family 9
DJ40_RS09155	COG2390	Transcriptional regulator
DJ40_RS09200	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ40_RS09200	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ40_RS09200	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DJ40_RS09205	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJ40_RS09210	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJ40_RS09215	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJ40_RS09220	COG2207	Transcriptional regulator
DJ40_RS09230	COG4269	membrane
DJ40_RS09250	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
DJ40_RS09290	COG3157	Type VI secretion system effector, Hcp
DJ40_RS09350	COG0582	viral genome integration into host DNA
DJ40_RS09360	COG0795	lipopolysaccharide-transporting ATPase activity
DJ40_RS09365	COG0795	lipopolysaccharide-transporting ATPase activity
DJ40_RS09375	COG2927	DNA polymerase III (CHI subunit)
DJ40_RS09390	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
DJ40_RS09400	COG2731	YhcH YjgK YiaL family protein
DJ40_RS09410	COG0601	transmembrane transport
DJ40_RS09415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJ40_RS09420	COG0444	Belongs to the ABC transporter superfamily
DJ40_RS09425	COG4608	Belongs to the ABC transporter superfamily
DJ40_RS09440	COG2188	Transcriptional regulator
DJ40_RS09445	COG3624	Phosphonate C-P lyase system protein PhnG
DJ40_RS09450	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
DJ40_RS09455	COG3626	phosphonate metabolism
DJ40_RS09460	COG3627	carbon phosphorus lyase activity
DJ40_RS09465	COG4107	phosphonate C-P lyase system protein PhnK
DJ40_RS09470	COG4778	phosphonate C-P lyase system protein PhnL
DJ40_RS09475	COG3454	Phosphonate metabolism
DJ40_RS09480	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
DJ40_RS09485	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DJ40_RS09490	COG0702	epimerase
DJ40_RS09505	COG3842	ATPase activity
DJ40_RS09510	COG0395	ABC-type sugar transport system, permease component
DJ40_RS09515	COG1175	transmembrane transport
DJ40_RS09545	COG3153	acetyltransferase
DJ40_RS09550	COG3154	lipid carrier protein
DJ40_RS09560	COG0826	peptidase U32
DJ40_RS09565	COG0826	peptidase U32
DJ40_RS09575	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJ40_RS09585	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DJ40_RS09605	COG0513	Belongs to the DEAD box helicase family
DJ40_RS09640	COG0195	Participates in both transcription termination and antitermination
DJ40_RS09660	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DJ40_RS09670	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DJ40_RS09685	COG1534	Rna-binding protein
DJ40_RS09695	COG2027	D-alanyl-D-alanine carboxypeptidase
DJ40_RS09700	COG0745	RESPONSE REGULATOR receiver
DJ40_RS09705	COG0642	Histidine kinase
DJ40_RS09745	COG3157	Type VI secretion system effector, Hcp
DJ40_RS09795	COG0697	spore germination
DJ40_RS09810	COG0142	geranyltranstransferase activity
DJ40_RS09820	COG3423	Transcriptional regulator
DJ40_RS09845	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DJ40_RS09855	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DJ40_RS09860	COG2105	PFAM AIG2 family protein
DJ40_RS09865	COG2911	Protein conserved in bacteria
DJ40_RS09870	COG0729	surface antigen
DJ40_RS09880	COG1253	flavin adenine dinucleotide binding
DJ40_RS09890	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DJ40_RS09900	COG0737	Belongs to the 5'-nucleotidase family
DJ40_RS09910	COG0545	Peptidyl-prolyl cis-trans isomerase
DJ40_RS09915	COG3061	Opacity-associated protein A
DJ40_RS09930	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DJ40_RS09940	COG0360	Binds together with S18 to 16S ribosomal RNA
DJ40_RS09950	COG1073	alpha beta
DJ40_RS09955	COG3650	response to hydrogen peroxide
DJ40_RS09960	COG1960	acyl-CoA dehydrogenase activity
DJ40_RS09965	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJ40_RS09970	COG0557	exoribonuclease II activity
DJ40_RS09985	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DJ40_RS09990	COG0330	HflC and HflK could
DJ40_RS09995	COG0330	HflC and HflK could
DJ40_RS10000	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DJ40_RS10020	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJ40_RS10025	COG0802	atpase or kinase
DJ40_RS10030	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DJ40_RS10030	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DJ40_RS10035	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DJ40_RS10060	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DJ40_RS10080	COG3264	Mechanosensitive ion channel
DJ40_RS10080	COG1511	domain protein
DJ40_RS10095	COG1053	succinate dehydrogenase
DJ40_RS10100	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DJ40_RS10110	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
DJ40_RS10155	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DJ40_RS10170	COG3383	formate dehydrogenase (NAD+) activity
DJ40_RS10175	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJ40_RS10180	COG0493	'glutamate synthase
DJ40_RS10180	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJ40_RS10185	COG1309	transcriptional regulator
DJ40_RS10255	COG1454	alcohol dehydrogenase
DJ40_RS10265	COG0629	single-stranded DNA binding
DJ40_RS10270	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DJ40_RS10275	COG2315	Protein conserved in bacteria
DJ40_RS10280	COG1448	Aminotransferase
DJ40_RS10305	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJ40_RS10310	COG0735	belongs to the Fur family
DJ40_RS10320	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DJ40_RS10365	COG3121	Chaperone
DJ40_RS10425	COG1358	cellular component organization or biogenesis
DJ40_RS10450	COG3721	Heme iron utilization protein
DJ40_RS10455	COG0702	epimerase
DJ40_RS10465	COG4771	TonB-dependent receptor
DJ40_RS10470	COG3720	iron ion transport
DJ40_RS10475	COG4558	Periplasmic binding protein
DJ40_RS10480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ40_RS10490	COG0626	cystathionine gamma-synthase activity
DJ40_RS10495	COG0814	amino acid
DJ40_RS10500	COG0583	DNA-binding transcription factor activity
DJ40_RS10505	COG0425	Belongs to the sulfur carrier protein TusA family
DJ40_RS10510	COG2391	methyltransferase activity
DJ40_RS10620	COG1301	dicarboxylic acid transport
DJ40_RS10630	COG3162	membrane
DJ40_RS10645	COG2801	Transposase and inactivated derivatives
DJ40_RS10690	COG0151	Belongs to the GarS family
DJ40_RS10750	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DJ40_RS10805	COG0250	Participates in transcription elongation, termination and antitermination
DJ40_RS10890	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
DJ40_RS10895	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DJ40_RS10900	COG1739	Uncharacterized protein family UPF0029
DJ40_RS10945	COG0805	protein transport
DJ40_RS10955	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DJ40_RS10975	COG1322	Protein conserved in bacteria
DJ40_RS10980	COG0586	Pfam SNARE associated Golgi protein
DJ40_RS10985	COG1966	Carbon starvation protein
DJ40_RS11000	COG0412	Dienelactone hydrolase
DJ40_RS11010	COG0583	DNA-binding transcription factor activity
DJ40_RS11015	COG0697	spore germination
DJ40_RS11020	COG0679	Auxin Efflux Carrier
DJ40_RS11025	COG0584	glycerophosphoryl diester phosphodiesterase
DJ40_RS11085	COG0410	ABC transporter
DJ40_RS11095	COG4177	L-phenylalanine transmembrane transporter activity
DJ40_RS11105	COG0683	leucine binding
DJ40_RS11120	COG2177	Part of the ABC transporter FtsEX involved in
DJ40_RS11125	COG2884	Cell division ATP-binding protein ftsE
DJ40_RS11130	COG0552	protein localization to endoplasmic reticulum
DJ40_RS11130	COG0552	protein localization to endoplasmic reticulum
DJ40_RS11140	COG0742	ribosomal rna small subunit methyltransferase
DJ40_RS11145	COG3776	membrane
DJ40_RS11160	COG3714	YhhN family
DJ40_RS11175	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DJ40_RS11185	COG0247	lactate metabolic process
DJ40_RS11195	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DJ40_RS11205	COG0584	glycerophosphoryl diester phosphodiesterase
DJ40_RS11215	COG0561	phosphatase activity
DJ40_RS11220	COG2267	carboxylic ester hydrolase activity
DJ40_RS11225	COG1280	lysine exporter protein (LysE YggA)
DJ40_RS11230	COG1280	lysine exporter protein (LysE YggA)
DJ40_RS11235	COG0514	ATP-dependent DNA helicase (RecQ)
DJ40_RS11240	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
DJ40_RS11245	COG2050	protein possibly involved in aromatic compounds catabolism
DJ40_RS11260	COG5564	TIM-barrel signal transduction protein
DJ40_RS11265	COG5441	Belongs to the UPF0261 family
DJ40_RS11275	COG0210	DNA helicase
DJ40_RS11280	COG1011	Hydrolase
DJ40_RS11285	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DJ40_RS11290	COG3159	Protein conserved in bacteria
DJ40_RS11315	COG3072	Adenylate cyclase
DJ40_RS11325	COG1587	Uroporphyrinogen-III synthase
DJ40_RS11330	COG2959	enzyme of heme biosynthesis
DJ40_RS11335	COG3071	HemY protein
DJ40_RS11360	COG1113	amino acid transport
DJ40_RS11380	COG2244	polysaccharide biosynthetic process
DJ40_RS11385	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DJ40_RS11390	COG0456	acetyltransferase
DJ40_RS11395	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DJ40_RS11400	COG1088	dTDP-glucose 4,6-dehydratase activity
DJ40_RS11405	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DJ40_RS11410	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DJ40_RS11415	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DJ40_RS11420	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DJ40_RS11425	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DJ40_RS11430	COG3118	belongs to the thioredoxin family
DJ40_RS11455	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DJ40_RS11475	COG3121	Chaperone
DJ40_RS11490	COG3121	Chaperone
DJ40_RS11525	COG0583	DNA-binding transcription factor activity
DJ40_RS11570	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJ40_RS11575	COG3978	acetolactate synthase activity
DJ40_RS11590	COG3085	chromosome segregation
DJ40_RS11600	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS11605	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS11610	COG1129	ABC transporter
DJ40_RS11615	COG1879	ABC-type sugar transport system periplasmic component
DJ40_RS11700	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DJ40_RS11700	COG0678	peroxiredoxin activity
DJ40_RS11705	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJ40_RS11775	COG0460	homoserine dehydrogenase
DJ40_RS11775	COG0527	aspartate kinase activity
DJ40_RS11780	COG0626	cystathionine gamma-synthase activity
DJ40_RS11785	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
DJ40_RS11795	COG4682	membrane
DJ40_RS11805	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DJ40_RS11815	COG1609	Transcriptional regulator
DJ40_RS11820	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DJ40_RS11835	COG1575	Belongs to the MenA family. Type 1 subfamily
DJ40_RS11880	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DJ40_RS11885	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DJ40_RS11890	COG1494	fructose-1,6-bisphosphatase
DJ40_RS11900	COG3152	Membrane
DJ40_RS11915	COG0583	DNA-binding transcription factor activity
DJ40_RS11920	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DJ40_RS11925	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DJ40_RS11930	COG0471	metal ion transport
DJ40_RS11940	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DJ40_RS11960	COG3678	ATP-independent chaperone mediated protein folding
DJ40_RS11965	COG0745	RESPONSE REGULATOR receiver
DJ40_RS11970	COG2205	protein histidine kinase activity
DJ40_RS11975	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DJ40_RS11975	COG2169	Transcriptional regulator
DJ40_RS11980	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DJ40_RS11985	COG1045	serine acetyltransferase
DJ40_RS12005	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DJ40_RS12010	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJ40_RS12020	COG4942	peptidase
DJ40_RS12025	COG2861	carbohydrate metabolic process
DJ40_RS12035	COG0156	8-amino-7-oxononanoate synthase activity
DJ40_RS12045	COG0859	PFAM glycosyl transferase family 9
DJ40_RS12050	COG0859	PFAM glycosyl transferase family 9
DJ40_RS12055	COG1519	Transferase
DJ40_RS12090	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DJ40_RS12115	COG1561	YicC-like family, N-terminal region
DJ40_RS12120	COG2860	membrane
DJ40_RS12135	COG1758	RNA polymerase activity
DJ40_RS12140	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DJ40_RS12145	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJ40_RS12150	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DJ40_RS12155	COG0786	glutamate:sodium symporter activity
DJ40_RS12160	COG2233	PERMEase
DJ40_RS12165	COG2982	Protein involved in outer membrane biogenesis
DJ40_RS12170	COG0456	acetyltransferase
DJ40_RS12185	COG1011	Hydrolase
DJ40_RS12200	COG0174	glutamine synthetase
DJ40_RS12205	COG3852	Histidine kinase
DJ40_RS12215	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DJ40_RS12235	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJ40_RS12235	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJ40_RS12240	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DJ40_RS12245	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DJ40_RS12250	COG3084	Protein conserved in bacteria
DJ40_RS12260	COG1763	Mo-molybdopterin cofactor biosynthetic process
DJ40_RS12265	COG3328	transposase activity
DJ40_RS12290	COG2186	Transcriptional regulator
DJ40_RS12295	COG0477	Major facilitator Superfamily
DJ40_RS12305	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ40_RS12335	COG1522	sequence-specific DNA binding
DJ40_RS12340	COG0716	FMN binding
DJ40_RS12355	COG3312	ion transport
DJ40_RS12410	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DJ40_RS12415	COG0573	inorganic phosphate transmembrane transporter activity
DJ40_RS12420	COG0581	inorganic phosphate transmembrane transporter activity
DJ40_RS12430	COG0704	Plays a role in the regulation of phosphate uptake
DJ40_RS12440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS12445	COG0765	amino acid transport
DJ40_RS12450	COG0765	amino acid transport
DJ40_RS12455	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJ40_RS12460	COG2252	PERMEase
DJ40_RS12485	COG0706	membrane insertase activity
DJ40_RS12495	COG0230	Belongs to the bacterial ribosomal protein bL34 family
DJ40_RS12505	COG0592	DNA-directed DNA polymerase activity
DJ40_RS12520	COG0187	DNA topoisomerase II activity
DJ40_RS12525	COG0561	phosphatase activity
DJ40_RS12535	COG2423	ornithine cyclodeaminase activity
DJ40_RS12540	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DJ40_RS12545	COG0823	Involved in the tonB-independent uptake of proteins
DJ40_RS12550	COG0823	Involved in the tonB-independent uptake of proteins
DJ40_RS12555	COG5645	(Lipo)protein
DJ40_RS12575	COG3977	Valine--pyruvate aminotransferase
DJ40_RS12595	COG0366	Alpha amylase catalytic
DJ40_RS12610	COG2885	chlorophyll binding
DJ40_RS12620	COG2818	Glycosylase
DJ40_RS12640	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ40_RS12640	COG2213	PTS system mannitol-specific
DJ40_RS12650	COG3722	fumarate hydratase activity
DJ40_RS12675	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DJ40_RS12685	COG0243	molybdopterin cofactor binding
DJ40_RS12685	COG3383	formate dehydrogenase (NAD+) activity
DJ40_RS12690	COG0243	molybdopterin cofactor binding
DJ40_RS12690	COG3383	formate dehydrogenase (NAD+) activity
DJ40_RS12695	COG0437	4 iron, 4 sulfur cluster binding
DJ40_RS12700	COG2864	formate dehydrogenase
DJ40_RS12715	COG3276	selenocysteine insertion sequence binding
DJ40_RS12750	COG3274	enterobacterial common antigen metabolic process
DJ40_RS12760	COG3188	usher protein
DJ40_RS12765	COG3121	Chaperone
DJ40_RS12775	COG1070	Carbohydrate kinase
DJ40_RS12785	COG4213	ABC transporter substrate-binding protein
DJ40_RS12795	COG4214	carbohydrate transport
DJ40_RS12800	COG2207	Transcriptional regulator
DJ40_RS12800	COG1609	Transcriptional regulator
DJ40_RS12805	COG0582	viral genome integration into host DNA
DJ40_RS12850	COG4604	ABC transporter, ATP-binding protein
DJ40_RS12855	COG4605	iron ion homeostasis
DJ40_RS12865	COG4607	ABC-type enterochelin transport system periplasmic component
DJ40_RS12895	COG2986	histidine ammonia-lyase
DJ40_RS12910	COG2194	sulfuric ester hydrolase activity
DJ40_RS12915	COG2197	response regulator
DJ40_RS12920	COG3851	Histidine kinase
DJ40_RS12925	COG2271	Major facilitator Superfamily
DJ40_RS12940	COG2831	hemolysin activation secretion protein
DJ40_RS12950	COG0747	negative chemotaxis
DJ40_RS12955	COG0601	transmembrane transport
DJ40_RS12960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJ40_RS12965	COG0444	Belongs to the ABC transporter superfamily
DJ40_RS12970	COG4608	Belongs to the ABC transporter superfamily
DJ40_RS12975	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DJ40_RS12980	COG2199	diguanylate cyclase activity
DJ40_RS12980	COG2200	EAL domain
DJ40_RS12985	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DJ40_RS13005	COG0612	Peptidase, M16
DJ40_RS13010	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ40_RS13015	COG1942	4-Oxalocrotonate Tautomerase
DJ40_RS13020	COG2200	EAL domain
DJ40_RS13025	COG2982	Protein involved in outer membrane biogenesis
DJ40_RS13030	COG2134	cdp-diacylglycerol pyrophosphatase
DJ40_RS13035	COG1295	ribonuclease BN
DJ40_RS13060	COG1929	Belongs to the glycerate kinase type-1 family
DJ40_RS13065	COG2610	gluconate transmembrane transporter activity
DJ40_RS13070	COG3835	regulator
DJ40_RS13075	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJ40_RS13080	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DJ40_RS13085	COG0339	signal peptide processing
DJ40_RS13105	COG0589	response to stress
DJ40_RS13115	COG0306	phosphate transporter
DJ40_RS13120	COG2081	HI0933 family
DJ40_RS13135	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS13150	COG0191	fructose-bisphosphate aldolase activity
DJ40_RS13170	COG1741	Belongs to the pirin family
DJ40_RS13175	COG1609	Transcriptional regulator
DJ40_RS13180	COG2610	gluconate transmembrane transporter activity
DJ40_RS13185	COG3265	gluconokinase activity
DJ40_RS13220	COG2095	MarC family integral membrane protein
DJ40_RS13225	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DJ40_RS13235	COG3275	phosphorelay sensor kinase activity
DJ40_RS13260	COG0058	SHG alpha-glucan phosphorylase activity
DJ40_RS13265	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DJ40_RS13285	COG1349	DNA-binding transcription factor activity
DJ40_RS13305	COG0058	SHG alpha-glucan phosphorylase activity
DJ40_RS13310	COG1640	4-alpha-glucanotransferase
DJ40_RS13345	COG1918	ferrous iron import across plasma membrane
DJ40_RS13355	COG2183	response to ionizing radiation
DJ40_RS13360	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DJ40_RS13385	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DJ40_RS13390	COG1011	Hydrolase
DJ40_RS13405	COG0494	nUDIX hydrolase
DJ40_RS13410	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DJ40_RS13435	COG4796	Type ii and iii secretion system protein
DJ40_RS13460	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DJ40_RS13465	COG0546	phosphoglycolate phosphatase activity
DJ40_RS13470	COG0180	Tryptophanyl-tRNA synthetase
DJ40_RS13490	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DJ40_RS13495	COG0402	S-adenosylhomocysteine deaminase activity
DJ40_RS13515	COG1486	melibiose metabolic process
DJ40_RS13520	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DJ40_RS13525	COG0433	COG0433 Predicted ATPase
DJ40_RS13540	COG1289	transmembrane transporter activity
DJ40_RS13550	COG1765	OsmC-like protein
DJ40_RS13560	COG3954	Phosphoribulokinase
DJ40_RS13570	COG0429	hydrolase of the alpha beta-hydrolase fold
DJ40_RS13580	COG4521	taurine ABC transporter
DJ40_RS13590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJ40_RS13595	COG2175	clavaminate synthase activity
DJ40_RS13605	COG1216	Glycosyl transferase, family 2
DJ40_RS13610	COG0488	(ABC) transporter
DJ40_RS13625	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DJ40_RS13630	COG1047	Peptidyl-prolyl cis-trans
DJ40_RS13640	COG0545	Peptidyl-prolyl cis-trans isomerase
DJ40_RS13645	COG2964	Protein conserved in bacteria
DJ40_RS13665	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DJ40_RS13670	COG0049	tRNA binding
DJ40_RS13695	COG0051	transcription antitermination factor activity, RNA binding
DJ40_RS13710	COG0089	rRNA binding
DJ40_RS13720	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DJ40_RS13730	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DJ40_RS13735	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DJ40_RS13745	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DJ40_RS13750	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DJ40_RS13790	COG1841	ribosomal large subunit assembly
DJ40_RS13800	COG0201	protein transport
DJ40_RS13805	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DJ40_RS13820	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DJ40_RS13835	COG0789	Transcriptional regulator
DJ40_RS13840	COG3036	rescue of stalled ribosome
DJ40_RS13880	COG0551	DNA topoisomerase type I activity
DJ40_RS13895	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DJ40_RS13935	COG3328	transposase activity
DJ40_RS13950	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DJ40_RS13955	COG2224	Isocitrate lyase
DJ40_RS13965	COG1414	Transcriptional regulator
DJ40_RS13980	COG0527	aspartate kinase activity
DJ40_RS13995	COG3833	ABC-type maltose transport systems, permease component
DJ40_RS14000	COG1175	transmembrane transport
DJ40_RS14115	COG3501	Rhs element vgr protein
DJ40_RS14155	COG3501	Rhs element vgr protein
DJ40_RS14195	COG3209	COG3209 Rhs family protein
DJ40_RS14215	COG0673	inositol 2-dehydrogenase activity
DJ40_RS14220	COG2207	Transcriptional regulator
DJ40_RS14225	COG1869	D-ribose catabolic process
DJ40_RS14230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ40_RS14235	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DJ40_RS14240	COG0431	NADPH-dependent FMN reductase
DJ40_RS14245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DJ40_RS14255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJ40_RS14265	COG3077	Addiction module antitoxin, RelB DinJ family
DJ40_RS14270	COG2252	PERMEase
DJ40_RS14275	COG0025	NhaP-type Na H and K H
DJ40_RS14285	COG1560	Kdo2-lipid A biosynthetic process
DJ40_RS14295	COG1129	ABC transporter
DJ40_RS14300	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS14310	COG1069	ribulokinase activity
DJ40_RS14320	COG0625	glutathione transferase activity
DJ40_RS14340	COG1278	Cold shock
DJ40_RS14345	COG1278	Cold shock
DJ40_RS14350	COG1278	Cold shock
DJ40_RS14365	COG3133	Outer membrane lipoprotein
DJ40_RS14370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ40_RS14380	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DJ40_RS14400	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DJ40_RS14405	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJ40_RS14415	COG4145	pantothenate transmembrane transporter activity
DJ40_RS14420	COG3924	membrane
DJ40_RS14425	COG0439	Biotin carboxylase
DJ40_RS14430	COG0511	ligase activity, forming carbon-carbon bonds
DJ40_RS14445	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DJ40_RS14450	COG0604	alcohol dehydrogenase
DJ40_RS14455	COG2200	EAL domain
DJ40_RS14455	COG2199	diguanylate cyclase activity
DJ40_RS14460	COG1077	Cell shape determining protein MreB Mrl
DJ40_RS14465	COG1792	Involved in formation and maintenance of cell shape
DJ40_RS14470	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DJ40_RS14475	COG0424	maF-like protein
DJ40_RS14480	COG1530	ribonuclease E activity
DJ40_RS14490	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DJ40_RS14495	COG0312	modulator of DNA gyrase
DJ40_RS14545	COG0583	DNA-binding transcription factor activity
DJ40_RS14565	COG1012	belongs to the aldehyde dehydrogenase family
DJ40_RS14580	COG2732	(Barnase) inhibitor
DJ40_RS14590	COG0312	modulator of DNA gyrase
DJ40_RS14600	COG3783	Cytochrome b(562)
DJ40_RS14605	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DJ40_RS14610	COG0366	Alpha amylase catalytic
DJ40_RS14615	COG1263	PTS System
DJ40_RS14615	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ40_RS14620	COG1609	Transcriptional regulator
DJ40_RS14645	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ40_RS14665	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DJ40_RS14670	COG1137	ATPase activity
DJ40_RS14675	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DJ40_RS14680	COG3117	lipopolysaccharide transmembrane transporter activity
DJ40_RS14685	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DJ40_RS14690	COG0517	IMP dehydrogenase activity
DJ40_RS14690	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DJ40_RS14695	COG0530	calcium, potassium:sodium antiporter activity
DJ40_RS14700	COG1127	ABC transporter
DJ40_RS14705	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DJ40_RS14710	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DJ40_RS14715	COG2854	intermembrane phospholipid transfer
DJ40_RS14720	COG3113	response to antibiotic
DJ40_RS14725	COG5007	Belongs to the BolA IbaG family
DJ40_RS14735	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJ40_RS14740	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJ40_RS14745	COG3105	Protein conserved in bacteria
DJ40_RS14750	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DJ40_RS14770	COG0625	glutathione transferase activity
DJ40_RS14775	COG2969	positive regulation of protein catabolic process
DJ40_RS14785	COG0493	'glutamate synthase
DJ40_RS14790	COG0067	glutamate synthase
DJ40_RS14790	COG0069	glutamate synthase activity
DJ40_RS14790	COG0070	glutamate synthase
DJ40_RS14795	COG1242	4 iron, 4 sulfur cluster binding
DJ40_RS14805	COG5002	protein histidine kinase activity
DJ40_RS14805	COG2198	Histidine kinase
DJ40_RS14805	COG0784	Response regulator, receiver
DJ40_RS14815	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DJ40_RS14825	COG2823	Periplasmic or secreted lipoprotein
DJ40_RS14845	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DJ40_RS14850	COG1741	Belongs to the pirin family
DJ40_RS14855	COG0583	DNA-binding transcription factor activity
DJ40_RS14860	COG0435	Glutathione S-transferase
DJ40_RS14865	COG2259	Doxx family
DJ40_RS14875	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
DJ40_RS14880	COG4575	ribosome binding
DJ40_RS14900	COG0586	Pfam SNARE associated Golgi protein
DJ40_RS14915	COG2271	Major facilitator Superfamily
DJ40_RS14935	COG2721	sulfolactate sulfo-lyase activity
DJ40_RS14950	COG0673	inositol 2-dehydrogenase activity
DJ40_RS14955	COG1451	nucleotide metabolic process
DJ40_RS14970	COG0446	pyridine nucleotide-disulphide oxidoreductase
DJ40_RS14970	COG1902	pentaerythritol trinitrate reductase activity
DJ40_RS14975	COG3247	response to pH
DJ40_RS14995	COG4245	von Willebrand factor, type A
DJ40_RS15010	COG4245	von Willebrand factor, type A
DJ40_RS15015	COG2831	hemolysin activation secretion protein
DJ40_RS15070	COG3210	domain, Protein
DJ40_RS15075	COG3210	domain, Protein
DJ40_RS15095	COG3842	ATPase activity
DJ40_RS15100	COG3459	Glycosyltransferase 36 associated
DJ40_RS15105	COG1609	Transcriptional regulator
DJ40_RS15110	COG2182	Extracellular solute-binding protein
DJ40_RS15120	COG0395	ABC-type sugar transport system, permease component
DJ40_RS15140	COG1289	transmembrane transporter activity
DJ40_RS15165	COG0436	Aminotransferase
DJ40_RS15185	COG0251	oxidation-reduction process
DJ40_RS15270	COG0358	DNA primase activity
DJ40_RS15275	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DJ40_RS15290	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DJ40_RS15305	COG4991	sh3 domain protein
DJ40_RS15310	COG3025	triphosphatase activity
DJ40_RS15325	COG0531	amino acid
DJ40_RS15345	COG3384	dioxygenase
DJ40_RS15350	COG0754	glutathionylspermidine amidase activity
DJ40_RS15365	COG1538	Outer membrane efflux protein
DJ40_RS15370	COG0494	nUDIX hydrolase
DJ40_RS15375	COG3151	Protein conserved in bacteria
DJ40_RS15380	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DJ40_RS15385	COG3150	esterase
DJ40_RS15395	COG0583	DNA-binding transcription factor activity
DJ40_RS15400	COG2249	NAD(P)H dehydrogenase (quinone) activity
DJ40_RS15405	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DJ40_RS15415	COG2132	Multicopper oxidase
DJ40_RS15435	COG0656	L-ascorbic acid biosynthetic process
DJ40_RS15445	COG1979	alcohol dehydrogenase
DJ40_RS15450	COG2207	Transcriptional regulator
DJ40_RS15455	COG0586	Pfam SNARE associated Golgi protein
DJ40_RS15460	COG0626	cystathionine gamma-synthase activity
DJ40_RS15465	COG0811	peptide transport
DJ40_RS15470	COG0848	biopolymer transport protein
DJ40_RS15520	COG4964	Belongs to the GSP D family
DJ40_RS15555	COG3397	chitin binding
DJ40_RS15560	COG3469	chitinase activity
DJ40_RS15585	COG4592	Periplasmic binding protein
DJ40_RS15605	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJ40_RS15610	COG1684	flagellar biosynthetic protein fliR
DJ40_RS15615	COG1987	bacterial-type flagellum assembly
DJ40_RS15640	COG1677	Flagellar hook-basal body complex protein FliE
DJ40_RS15680	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
DJ40_RS15685	COG1815	bacterial-type flagellum-dependent cell motility
DJ40_RS15690	COG1558	bacterial-type flagellum-dependent cell motility
DJ40_RS15695	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DJ40_RS15700	COG1749	Flagellar hook protein flgE
DJ40_RS15705	COG4787	bacterial-type flagellum-dependent cell motility
DJ40_RS15710	COG4786	Flagellar basal body rod
DJ40_RS15730	COG1256	bacterial-type flagellum assembly
DJ40_RS15770	COG1191	sigma factor activity
DJ40_RS15775	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DJ40_RS15805	COG3133	Outer membrane lipoprotein
DJ40_RS15815	COG5001	Diguanylate cyclase
DJ40_RS15850	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DJ40_RS15855	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DJ40_RS15960	COG2195	Cleaves the N-terminal amino acid of tripeptides
DJ40_RS15965	COG4771	TonB-dependent receptor
DJ40_RS15975	COG2226	methyltransferase
DJ40_RS15975	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DJ40_RS15975	COG3433	isochorismatase activity
DJ40_RS15985	COG3433	isochorismatase activity
DJ40_RS15985	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DJ40_RS15985	COG2226	methyltransferase
DJ40_RS16010	COG2375	cellular response to nickel ion
DJ40_RS16010	COG1132	(ABC) transporter
DJ40_RS16015	COG1132	(ABC) transporter
DJ40_RS16030	COG2610	gluconate transmembrane transporter activity
DJ40_RS16045	COG3501	Rhs element vgr protein
DJ40_RS16055	COG3209	COG3209 Rhs family protein
DJ40_RS16085	COG0471	metal ion transport
DJ40_RS16090	COG1609	Transcriptional regulator
DJ40_RS16100	COG2211	Major facilitator Superfamily
DJ40_RS16145	COG2771	luxR family
DJ40_RS16150	COG3916	Acyl-homoserine-lactone synthase
DJ40_RS16345	COG4974	Belongs to the 'phage' integrase family
DJ40_RS16350	COG0582	viral genome integration into host DNA
DJ40_RS16455	COG2979	Protein of unknown function (DUF533)
DJ40_RS16600	COG0582	viral genome integration into host DNA
DJ40_RS16610	COG1982	Orn Lys Arg decarboxylase major
DJ40_RS16615	COG1879	ABC-type sugar transport system periplasmic component
DJ40_RS16620	COG1129	ABC transporter
DJ40_RS16625	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS16650	COG1194	a g-specific adenine glycosylase
DJ40_RS16660	COG3171	Protein conserved in bacteria
DJ40_RS16675	COG3064	Membrane
DJ40_RS16675	COG1073	alpha beta
DJ40_RS16675	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
DJ40_RS16680	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DJ40_RS16695	COG0762	integral membrane protein
DJ40_RS16700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DJ40_RS16705	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DJ40_RS16710	COG2805	Type II/IV secretion system protein
DJ40_RS16720	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DJ40_RS16735	COG0189	ligase activity
DJ40_RS16740	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DJ40_RS16750	COG2356	endonuclease I
DJ40_RS16765	COG1166	arginine decarboxylase activity
DJ40_RS16775	COG0501	Belongs to the peptidase M48B family
DJ40_RS16780	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DJ40_RS16795	COG0191	fructose-bisphosphate aldolase activity
DJ40_RS16825	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DJ40_RS16830	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DJ40_RS16845	COG0006	proline dipeptidase activity
DJ40_RS16850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJ40_RS16855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJ40_RS16885	COG5295	Hep Hag repeat protein
DJ40_RS16895	COG1272	protein, Hemolysin III
DJ40_RS16920	COG0745	RESPONSE REGULATOR receiver
DJ40_RS16925	COG2205	protein histidine kinase activity
DJ40_RS16930	COG4452	Inner membrane protein CreD
DJ40_RS16935	COG0716	FMN binding
DJ40_RS16940	COG4974	Belongs to the 'phage' integrase family
DJ40_RS16945	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DJ40_RS16950	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DJ40_RS16970	COG0582	viral genome integration into host DNA
DJ40_RS17000	COG2944	sequence-specific DNA binding
DJ40_RS17095	COG1695	Transcriptional regulator
DJ40_RS17100	COG0791	NLP P60 protein
DJ40_RS17110	COG1879	ABC-type sugar transport system periplasmic component
DJ40_RS17115	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS17120	COG1129	ABC transporter
DJ40_RS17130	COG2182	Extracellular solute-binding protein
DJ40_RS17135	COG1175	transmembrane transport
DJ40_RS17140	COG3833	ABC-type maltose transport systems, permease component
DJ40_RS17145	COG3867	Arabinogalactan endo-beta-1,4-galactanase
DJ40_RS17150	COG1874	Beta-galactosidase
DJ40_RS17155	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ40_RS17155	COG1263	PTS System
DJ40_RS17185	COG2271	Major facilitator Superfamily
DJ40_RS17215	COG3119	arylsulfatase activity
DJ40_RS17220	COG0641	radical SAM
DJ40_RS17230	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS17240	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ40_RS17245	COG3716	PTS system mannose fructose sorbose family IID component
DJ40_RS17250	COG3715	PTS system
DJ40_RS17255	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ40_RS17260	COG2222	sugar isomerase
DJ40_RS17270	COG1349	DNA-binding transcription factor activity
DJ40_RS17275	COG3119	arylsulfatase activity
DJ40_RS17305	COG0288	reversible hydration of carbon dioxide
DJ40_RS17325	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DJ40_RS17390	COG0840	transmembrane signaling receptor activity
DJ40_RS17405	COG0583	DNA-binding transcription factor activity
DJ40_RS17410	COG2814	Major facilitator Superfamily
DJ40_RS17415	COG0583	DNA-binding transcription factor activity
DJ40_RS17425	COG1609	Transcriptional regulator
DJ40_RS17455	COG0667	Aldo Keto reductase
DJ40_RS17520	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DJ40_RS17530	COG1074	ATP-dependent DNA helicase activity
DJ40_RS17535	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DJ40_RS17545	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJ40_RS17565	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DJ40_RS17570	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DJ40_RS17575	COG2166	iron-sulfur cluster assembly
DJ40_RS17580	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DJ40_RS17585	COG0583	DNA-binding transcription factor activity
DJ40_RS17590	COG2363	Small membrane protein
DJ40_RS17605	COG1611	Belongs to the LOG family
DJ40_RS17625	COG3098	single-species biofilm formation
DJ40_RS17630	COG0564	pseudouridine synthase activity
DJ40_RS17690	COG0575	Belongs to the CDS family
DJ40_RS17695	COG0750	zinc metalloprotease
DJ40_RS17710	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DJ40_RS17735	COG0587	DNA-directed DNA polymerase activity
DJ40_RS17745	COG0346	lactoylglutathione lyase activity
DJ40_RS17760	COG4568	rho-dependent transcription termination
DJ40_RS17770	COG4681	YaeQ
DJ40_RS17780	COG3015	lipoprotein NlpE involved in copper resistance
DJ40_RS17790	COG1720	tRNA m6t6A37 methyltransferase activity
DJ40_RS17800	COG1464	Belongs to the NlpA lipoprotein family
DJ40_RS17805	COG2011	ABC-type metal ion transport system permease component
DJ40_RS17815	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DJ40_RS17855	COG0656	L-ascorbic acid biosynthetic process
DJ40_RS17870	COG1388	LysM domain
DJ40_RS17870	COG0741	lytic transglycosylase activity
DJ40_RS17875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ40_RS17880	COG2226	methyltransferase
DJ40_RS17900	COG1953	Uracil, thiamine, allantoin
DJ40_RS17910	COG2113	Glycine betaine
DJ40_RS17915	COG4176	ABC-type proline glycine betaine transport system permease component
DJ40_RS17920	COG4175	Glycine betaine
DJ40_RS17925	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DJ40_RS17965	COG1278	Cold shock
DJ40_RS17970	COG0747	negative chemotaxis
DJ40_RS17980	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJ40_RS17985	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
DJ40_RS17990	COG1124	(ABC) transporter
DJ40_RS17995	COG0831	urea catabolic process
DJ40_RS18020	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DJ40_RS18030	COG4413	Urea transporter
DJ40_RS18035	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DJ40_RS18050	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DJ40_RS18070	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DJ40_RS18075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DJ40_RS18080	COG1447	Phosphotransferase system cellobiose-specific component IIA
DJ40_RS18085	COG1917	Cupin 2, conserved barrel domain protein
DJ40_RS18085	COG2169	Transcriptional regulator
DJ40_RS18110	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
DJ40_RS18115	COG0033	Phosphoglucomutase
DJ40_RS18135	COG0745	RESPONSE REGULATOR receiver
DJ40_RS18140	COG2205	protein histidine kinase activity
DJ40_RS18180	COG3272	Protein of unknown function (DUF1722)
DJ40_RS18190	COG5212	phosphodiesterase
DJ40_RS18195	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DJ40_RS18200	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DJ40_RS18205	COG1984	allophanate hydrolase subunit 2
DJ40_RS18255	COG0513	Belongs to the DEAD box helicase family
DJ40_RS18265	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DJ40_RS18280	COG3026	antisigma factor binding
DJ40_RS18285	COG3086	response to oxidative stress
DJ40_RS18330	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJ40_RS18425	COG3772	lysozyme
DJ40_RS18525	COG1196	nuclear chromosome segregation
DJ40_RS18525	COG0739	heme binding
DJ40_RS18525	COG0741	lytic transglycosylase activity
DJ40_RS18605	COG1737	Transcriptional regulator
DJ40_RS18615	COG0560	Phosphoserine phosphatase
DJ40_RS18655	COG2205	protein histidine kinase activity
DJ40_RS18660	COG3170	Tfp pilus assembly protein FimV
DJ40_RS18665	COG2204	response regulator
DJ40_RS18670	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DJ40_RS18670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DJ40_RS18675	COG0347	Belongs to the P(II) protein family
DJ40_RS18680	COG2188	Transcriptional regulator
DJ40_RS18685	COG1017	nitric oxide dioxygenase activity
DJ40_RS18685	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJ40_RS18705	COG2814	Major facilitator Superfamily
DJ40_RS18710	COG3711	transcriptional antiterminator
DJ40_RS18715	COG3683	transport system, periplasmic component
DJ40_RS18720	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
DJ40_RS18740	COG1104	cysteine desulfurase activity
DJ40_RS18745	COG0822	iron-sulfur transferase activity
DJ40_RS18765	COG0633	Ferredoxin
DJ40_RS18770	COG2975	iron-sulfur cluster assembly
DJ40_RS18785	COG3468	outer membrane autotransporter barrel domain protein
DJ40_RS18790	COG3468	outer membrane autotransporter barrel domain protein
DJ40_RS18835	COG2976	Protein conserved in bacteria
DJ40_RS18840	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DJ40_RS18855	COG1645	bacterial-type flagellum-dependent swarming motility
DJ40_RS18865	COG0516	GMP reductase activity
DJ40_RS18865	COG0517	IMP dehydrogenase activity
DJ40_RS18915	COG0351	phosphomethylpyrimidine kinase
DJ40_RS18935	COG0826	peptidase U32
DJ40_RS18940	COG3422	double-strand break repair
DJ40_RS18945	COG0745	RESPONSE REGULATOR receiver
DJ40_RS18950	COG2205	protein histidine kinase activity
DJ40_RS18975	COG3842	ATPase activity
DJ40_RS18985	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DJ40_RS18995	COG1176	ABC-type spermidine putrescine transport system, permease component I
DJ40_RS19000	COG1177	transmembrane transport
DJ40_RS19005	COG0443	Heat shock 70 kDa protein
DJ40_RS19010	COG2239	Acts as a magnesium transporter
DJ40_RS19025	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DJ40_RS19035	COG0581	inorganic phosphate transmembrane transporter activity
DJ40_RS19050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ40_RS19055	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DJ40_RS19070	COG2233	PERMEase
DJ40_RS19080	COG1393	Belongs to the ArsC family
DJ40_RS19085	COG4783	chaperone-mediated protein folding
DJ40_RS19090	COG0628	permease
DJ40_RS19110	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DJ40_RS19115	COG2716	regulation of RNA biosynthetic process
DJ40_RS19125	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DJ40_RS19135	COG2321	neutral zinc metallopeptidase
DJ40_RS19155	COG1876	peptidase activity
DJ40_RS19165	COG1393	Belongs to the ArsC family
DJ40_RS19180	COG1175	transmembrane transport
DJ40_RS19185	COG3842	ATPase activity
DJ40_RS19190	COG3119	arylsulfatase activity
DJ40_RS19195	COG0641	radical SAM
DJ40_RS19200	COG1988	membrane-bound metal-dependent
DJ40_RS19210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJ40_RS19220	COG2197	response regulator
DJ40_RS19225	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJ40_RS19225	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DJ40_RS19230	COG3062	negative regulation of establishment of protein localization
DJ40_RS19240	COG3043	anaerobic respiration
DJ40_RS19245	COG3005	denitrification pathway
DJ40_RS19290	COG3111	PFAM Bacterial OB fold (BOF) protein
DJ40_RS19300	COG2837	iron assimilation
DJ40_RS19305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DJ40_RS19315	COG4886	Leucine-rich repeat (LRR) protein
DJ40_RS19325	COG2731	YhcH YjgK YiaL family protein
DJ40_RS19335	COG1737	Transcriptional regulator
DJ40_RS19345	COG4150	thiosulfate binding
DJ40_RS19350	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DJ40_RS19355	COG4208	sulfate ABC transporter
DJ40_RS19370	COG0745	RESPONSE REGULATOR receiver
DJ40_RS19375	COG3850	Histidine kinase
DJ40_RS19375	COG5002	protein histidine kinase activity
DJ40_RS19385	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DJ40_RS19400	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DJ40_RS19415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DJ40_RS19420	COG0745	RESPONSE REGULATOR receiver
DJ40_RS19425	COG2205	protein histidine kinase activity
DJ40_RS19440	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ40_RS19450	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
DJ40_RS19465	COG3530	Putative quorum-sensing-regulated virulence factor
DJ40_RS19515	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ40_RS19530	COG0667	Aldo Keto reductase
DJ40_RS19555	COG0436	Aminotransferase
DJ40_RS19560	COG3038	cytochrome b561
DJ40_RS19590	COG3381	protein complex oligomerization
DJ40_RS19595	COG3302	dmso reductase anchor subunit
DJ40_RS19600	COG0437	4 iron, 4 sulfur cluster binding
DJ40_RS19605	COG0243	molybdopterin cofactor binding
DJ40_RS19640	COG2951	lytic endotransglycosylase activity
DJ40_RS19700	COG3121	Chaperone
DJ40_RS19705	COG3188	usher protein
DJ40_RS19785	COG2824	Alkylphosphonate utilization operon protein PhnA
DJ40_RS19795	COG1704	LemA family
DJ40_RS19815	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJ40_RS19820	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJ40_RS19825	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJ40_RS19835	COG1138	Cytochrome C-type biogenesis protein
DJ40_RS19840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DJ40_RS19845	COG4235	cytochrome complex assembly
DJ40_RS19845	COG3088	subunit of a heme lyase
DJ40_RS19850	COG3088	subunit of a heme lyase
DJ40_RS19850	COG4235	cytochrome complex assembly
DJ40_RS19865	COG3691	Protein conserved in bacteria
DJ40_RS19880	COG2062	phosphohistidine phosphatase, SixA
DJ40_RS19890	COG2890	protein-(glutamine-N5) methyltransferase activity
DJ40_RS19905	COG0730	response to heat
DJ40_RS19910	COG3101	peptidyl-lysine hydroxylation
DJ40_RS19925	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJ40_RS19930	COG1794	racemase activity, acting on amino acids and derivatives
DJ40_RS19945	COG0697	spore germination
DJ40_RS19965	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DJ40_RS19975	COG0586	Pfam SNARE associated Golgi protein
DJ40_RS19985	COG0285	dihydrofolate synthase activity
DJ40_RS19990	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
DJ40_RS19995	COG1286	toxin biosynthetic process
DJ40_RS20000	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DJ40_RS20010	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS20015	COG4215	(ABC) transporter
DJ40_RS20020	COG4160	amino acid transport
DJ40_RS20025	COG4598	ABC transporter
DJ40_RS20030	COG1090	epimerase
DJ40_RS20040	COG0622	Phosphoesterase
DJ40_RS20045	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DJ40_RS20050	COG3037	sugar-specific permease SgaT UlaA
DJ40_RS20065	COG1609	Transcriptional regulator
DJ40_RS20070	COG0280	phosphate acetyltransferase
DJ40_RS20070	COG0857	belongs to the CobB CobQ family
DJ40_RS20095	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJ40_RS20100	COG0471	metal ion transport
DJ40_RS20100	COG0490	domain, Protein
DJ40_RS20115	COG0436	Aminotransferase
DJ40_RS20125	COG0583	DNA-binding transcription factor activity
DJ40_RS20135	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJ40_RS20155	COG1034	ATP synthesis coupled electron transport
DJ40_RS20170	COG0839	Belongs to the complex I subunit 6 family
DJ40_RS20180	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DJ40_RS20185	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJ40_RS20200	COG2731	YhcH YjgK YiaL family protein
DJ40_RS20205	COG3265	gluconokinase activity
DJ40_RS20210	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS20215	COG1649	PFAM Uncharacterised BCR, COG1649
DJ40_RS20220	COG1609	Transcriptional regulator
DJ40_RS20230	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DJ40_RS20245	COG0129	dihydroxy-acid dehydratase activity
DJ40_RS20260	COG4575	ribosome binding
DJ40_RS20270	COG1169	isochorismate synthase
DJ40_RS20285	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DJ40_RS20300	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DJ40_RS20320	COG1126	abc transporter atp-binding protein
DJ40_RS20325	COG0765	amino acid transport
DJ40_RS20330	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ40_RS20360	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DJ40_RS20380	COG1063	alcohol dehydrogenase
DJ40_RS20385	COG1879	ABC-type sugar transport system periplasmic component
DJ40_RS20390	COG1129	ABC transporter
DJ40_RS20395	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ40_RS20400	COG1609	Transcriptional regulator
DJ40_RS20405	COG0583	DNA-binding transcription factor activity
DJ40_RS20410	COG0473	3-isopropylmalate dehydrogenase activity
DJ40_RS20415	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DJ40_RS20420	COG4638	Rieske (2fe-2S)
DJ40_RS20425	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJ40_RS20430	COG2831	hemolysin activation secretion protein
DJ40_RS20460	COG3210	domain, Protein
DJ40_RS20470	COG3842	ATPase activity
DJ40_RS20480	COG1609	Transcriptional regulator
DJ40_RS20495	COG0395	ABC-type sugar transport system, permease component
DJ40_RS20500	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
DJ40_RS20520	COG0668	transmembrane transport
DJ40_RS20525	COG1518	maintenance of DNA repeat elements
DJ40_RS20530	COG1203	CRISPR-associated helicase, Cas3
DJ40_RS20555	COG0667	Aldo Keto reductase
DJ40_RS20565	COG0477	Major facilitator Superfamily
DJ40_RS20575	COG0583	DNA-binding transcription factor activity
DJ40_RS20580	COG2771	luxR family
DJ40_RS20585	COG3916	Acyl-homoserine-lactone synthase
DJ40_RS20610	COG2943	transferase activity, transferring hexosyl groups
DJ40_RS20615	COG5645	(Lipo)protein
DJ40_RS20625	COG1560	Kdo2-lipid A biosynthetic process
DJ40_RS20650	COG0628	permease
DJ40_RS20685	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DJ40_RS20690	COG1530	ribonuclease E activity
DJ40_RS20695	COG0564	pseudouridine synthase activity
DJ40_RS20700	COG0424	maF-like protein
DJ40_RS20705	COG1399	metal-binding, possibly nucleic acid-binding protein
DJ40_RS20710	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DJ40_RS20740	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJ40_RS20745	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJ40_RS20750	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DJ40_RS20760	COG0470	DNA polymerase III
DJ40_RS20765	COG0084	hydrolase, TatD family'
DJ40_RS20770	COG1263	PTS System
DJ40_RS20770	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ40_RS20775	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DJ40_RS20780	COG0537	adenosine 5'-monophosphoramidase activity
DJ40_RS20785	COG5633	Lipoprotein
DJ40_RS20810	COG1252	NADH dehydrogenase
DJ40_RS20825	COG3134	Outer membrane lipoprotein
DJ40_RS20830	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DJ40_RS20835	COG4591	ABC-type transport system involved in lipoprotein release permease component
DJ40_RS20845	COG4591	ABC-type transport system involved in lipoprotein release permease component
DJ40_RS20865	COG2850	peptidyl-arginine hydroxylation
DJ40_RS20875	COG0745	RESPONSE REGULATOR receiver
DJ40_RS20885	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DJ40_RS20905	COG1187	pseudouridine synthase activity
DJ40_RS20910	COG0538	isocitrate dehydrogenase activity
DJ40_RS20915	COG0582	viral genome integration into host DNA
DJ40_RS20975	COG2815	serine threonine protein kinase
DJ40_RS20975	COG0515	serine threonine protein kinase
DJ40_RS21020	COG1724	mRNA binding
DJ40_RS21025	COG1598	PFAM Uncharacterised protein family UPF0150
DJ40_RS21075	COG0840	transmembrane signaling receptor activity
DJ40_RS21080	COG0702	epimerase
DJ40_RS21085	COG1733	regulation of RNA biosynthetic process
DJ40_RS21110	COG1522	sequence-specific DNA binding
DJ40_RS21120	COG3321	synthase
DJ40_RS21120	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS21120	COG0604	alcohol dehydrogenase
DJ40_RS21140	COG0840	transmembrane signaling receptor activity
DJ40_RS21150	COG1285	pathogenesis
DJ40_RS21175	COG1360	Flagellar Motor Protein
DJ40_RS21180	COG0643	Histidine kinase
DJ40_RS21180	COG2198	Histidine kinase
DJ40_RS21185	COG0835	chemotaxis
DJ40_RS21200	COG0840	transmembrane signaling receptor activity
DJ40_RS21205	COG0840	transmembrane signaling receptor activity
DJ40_RS21210	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DJ40_RS21220	COG0745	RESPONSE REGULATOR receiver
DJ40_RS21225	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
DJ40_RS21235	COG3023	N-Acetylmuramoyl-L-alanine amidase
DJ40_RS21240	COG5295	Hep Hag repeat protein
DJ40_RS21245	COG5295	Hep Hag repeat protein
DJ40_RS21260	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DJ40_RS21305	COG3121	Chaperone
DJ40_RS21325	COG3008	intermembrane lipid transfer
DJ40_RS21330	COG2995	paraquat-inducible protein a
DJ40_RS21335	COG1956	GAF domain-containing protein
DJ40_RS21345	COG0793	Belongs to the peptidase S41A family
DJ40_RS21365	COG3539	Fimbrial protein
DJ40_RS21370	COG3121	Chaperone
DJ40_RS21385	COG3121	Chaperone
DJ40_RS21390	COG2814	Major facilitator Superfamily
DJ40_RS21395	COG0823	Involved in the tonB-independent uptake of proteins
DJ40_RS21405	COG3023	N-Acetylmuramoyl-L-alanine amidase
DJ40_RS21410	COG1823	symporter activity
DJ40_RS21415	COG1988	membrane-bound metal-dependent
DJ40_RS21420	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DJ40_RS21425	COG1653	transport
DJ40_RS21430	COG3842	ATPase activity
DJ40_RS21435	COG0395	ABC-type sugar transport system, permease component
DJ40_RS21440	COG1175	transmembrane transport
DJ40_RS21450	COG1028	Short-chain dehydrogenase reductase Sdr
DJ40_RS21460	COG1917	Cupin 2, conserved barrel domain protein
DJ40_RS21465	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJ40_RS21475	COG3001	Fructosamine kinase
DJ40_RS21485	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJ40_RS21490	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJ40_RS21495	COG1121	(ABC) transporter
DJ40_RS21500	COG0803	Belongs to the bacterial solute-binding protein 9 family
DJ40_RS21565	COG5280	Phage tail tape measure protein TP901
DJ40_RS21565	COG3953	SLT domain
DJ40_RS21595	COG4249	Peptidase C14 caspase catalytic subunit p20
DJ40_RS21630	COG0776	regulation of translation
DJ40_RS21645	COG0386	Belongs to the glutathione peroxidase family
DJ40_RS21690	COG0791	NLP P60 protein
DJ40_RS21715	COG0574	Belongs to the PEP-utilizing enzyme family
DJ40_RS21715	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DJ40_RS21720	COG0628	permease
DJ40_RS21725	COG0247	lactate metabolic process
DJ40_RS21725	COG0277	FAD linked oxidase domain protein
DJ40_RS21730	COG2050	protein possibly involved in aromatic compounds catabolism
DJ40_RS21740	COG0316	Belongs to the HesB IscA family
DJ40_RS21745	COG0719	Fe-S assembly protein
DJ40_RS21750	COG0396	ATPase activity
DJ40_RS21755	COG0719	Fe-S assembly protein
DJ40_RS21770	COG1388	LysM domain
DJ40_RS21770	COG1376	ErfK ybiS ycfS ynhG family protein
DJ40_RS21805	COG0307	riboflavin synthase, alpha
DJ40_RS21835	COG3157	Type VI secretion system effector, Hcp
DJ40_RS21865	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ40_RS21905	COG2373	Large extracellular alpha-helical protein
DJ40_RS21905	COG1388	LysM domain
DJ40_RS21905	COG4932	domain protein
DJ40_RS21905	COG2373	Large extracellular alpha-helical protein
DJ40_RS21905	COG1388	LysM domain
DJ40_RS21905	COG4932	domain protein
DJ40_RS21935	COG5301	cellulose 1,4-beta-cellobiosidase activity