##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM75031v1 #!genome-build-accession NCBI_Assembly:GCF_000750315.1 ##sequence-region NZ_CP008943.1 1 4806594 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CP008943.1 RefSeq region 1 4806594 . + . ID=id0;Dbxref=taxon:633;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=ATCC 6904 NZ_CP008943.1 RefSeq gene 4806221 4807423 . - . ID=gene0;Name=DJ40_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00005 NZ_CP008943.1 Protein Homology CDS 4806221 4807423 . - 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_042592823.1;Name=WP_042592823.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_042592823.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1119 2051 . + . ID=gene1;Name=DJ40_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00010;old_locus_tag=DJ40_2 NZ_CP008943.1 Protein Homology CDS 1119 2051 . + 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_002210942.1;Name=WP_002210942.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210942.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2154 3179 . - . ID=gene2;Name=DJ40_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00015;old_locus_tag=DJ40_3 NZ_CP008943.1 Protein Homology CDS 2154 3179 . - 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_002210943.1;Name=WP_002210943.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_002210943.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3706 4284 . - . ID=gene3;Name=DJ40_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00020;old_locus_tag=DJ40_5 NZ_CP008943.1 Protein Homology CDS 3706 4284 . - 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_038399781.1;Name=WP_038399781.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_038399781.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4645 5496 . - . ID=gene4;Name=DJ40_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00025;old_locus_tag=DJ40_6 NZ_CP008943.1 Protein Homology CDS 4645 5496 . - 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_012105035.1;Name=WP_012105035.1;gbkey=CDS;product=hydrolase;protein_id=WP_012105035.1;transl_table=11 NZ_CP008943.1 RefSeq gene 5615 5836 . + . ID=gene5;Name=DJ40_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00030;old_locus_tag=DJ40_7 NZ_CP008943.1 Protein Homology CDS 5615 5836 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_012304028.1;Name=WP_012304028.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304028.1;transl_table=11 NZ_CP008943.1 RefSeq gene 5936 6286 . + . ID=gene6;Name=DJ40_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00035;old_locus_tag=DJ40_8 NZ_CP008943.1 Protein Homology CDS 5936 6286 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 6384 6558 . + . ID=id1;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 6595 7275 . - . ID=gene7;Name=DJ40_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00040;old_locus_tag=DJ40_9 NZ_CP008943.1 Protein Homology CDS 6595 7275 . - 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_011906187.1;Name=WP_011906187.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_011906187.1;transl_table=11 NZ_CP008943.1 RefSeq gene 7354 7761 . - . ID=gene8;Name=DJ40_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00045;old_locus_tag=DJ40_10 NZ_CP008943.1 Protein Homology CDS 7354 7761 . - 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_011192527.1;Name=WP_011192527.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=glyoxalase I;protein_id=WP_011192527.1;transl_table=11 NZ_CP008943.1 RefSeq gene 8034 10982 . + . ID=gene9;Name=DJ40_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00050;old_locus_tag=DJ40_11 NZ_CP008943.1 Protein Homology CDS 8034 10982 . + 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_038399783.1;Name=WP_038399783.1;gbkey=CDS;product=toxin;protein_id=WP_038399783.1;transl_table=11 NZ_CP008943.1 RefSeq gene 11203 12300 . - . ID=gene10;Name=DJ40_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00055;old_locus_tag=DJ40_12 NZ_CP008943.1 Protein Homology CDS 11203 12300 . - 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_038399784.1;Name=WP_038399784.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_038399784.1;transl_table=11 NZ_CP008943.1 RefSeq gene 12388 12987 . - . ID=gene11;Name=DJ40_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00060;old_locus_tag=DJ40_13 NZ_CP008943.1 Protein Homology CDS 12388 12987 . - 0 ID=cds11;Parent=gene11;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NZ_CP008943.1 RefSeq gene 13230 14867 . - . ID=gene12;Name=DJ40_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00065;old_locus_tag=DJ40_14 NZ_CP008943.1 Protein Homology CDS 13230 14867 . - 0 ID=cds12;Parent=gene12;Dbxref=Genbank:WP_038399786.1;Name=WP_038399786.1;gbkey=CDS;product=hydrolase;protein_id=WP_038399786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 15041 15280 . + . ID=gene13;Name=DJ40_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00070;old_locus_tag=DJ40_15 NZ_CP008943.1 Protein Homology CDS 15041 15280 . + 0 ID=cds13;Parent=gene13;Dbxref=Genbank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210953.1;transl_table=11 NZ_CP008943.1 RefSeq gene 15412 16307 . + . ID=gene14;Name=DJ40_RS00075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00075;old_locus_tag=DJ40_16;pseudo=true NZ_CP008943.1 Protein Homology CDS 15412 16307 . + 0 ID=cds14;Parent=gene14;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 17105 17536 . + . ID=gene15;Name=DJ40_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00080;old_locus_tag=DJ40_17 NZ_CP008943.1 Protein Homology CDS 17105 17536 . + 0 ID=cds15;Parent=gene15;Dbxref=Genbank:WP_002210955.1;Name=WP_002210955.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_002210955.1;transl_table=11 NZ_CP008943.1 RefSeq gene 17680 18147 . - . ID=gene16;Name=DJ40_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00085;old_locus_tag=DJ40_18 NZ_CP008943.1 Protein Homology CDS 17680 18147 . - 0 ID=cds16;Parent=gene16;Dbxref=Genbank:WP_012105040.1;Name=WP_012105040.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105040.1;transl_table=11 NZ_CP008943.1 RefSeq gene 18703 19815 . + . ID=gene17;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=DJ40_RS00090;old_locus_tag=DJ40_19 NZ_CP008943.1 Protein Homology CDS 18703 19815 . + 0 ID=cds17;Parent=gene17;Dbxref=Genbank:WP_002218322.1;Name=WP_002218322.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NZ_CP008943.1 RefSeq gene 19873 20187 . + . ID=gene18;Name=DJ40_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00095;old_locus_tag=DJ40_20 NZ_CP008943.1 Protein Homology CDS 19873 20187 . + 0 ID=cds18;Parent=gene18;Dbxref=Genbank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002218323.1;transl_table=11 NZ_CP008943.1 RefSeq gene 20278 20931 . + . ID=gene19;Name=DJ40_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00100;old_locus_tag=DJ40_21 NZ_CP008943.1 Protein Homology CDS 20278 20931 . + 0 ID=cds19;Parent=gene19;Dbxref=Genbank:WP_002210959.1;Name=WP_002210959.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NZ_CP008943.1 RefSeq gene 21113 22387 . + . ID=gene20;Name=DJ40_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00105;old_locus_tag=DJ40_22 NZ_CP008943.1 Protein Homology CDS 21113 22387 . + 0 ID=cds20;Parent=gene20;Dbxref=Genbank:WP_011192524.1;Name=WP_011192524.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_011192524.1;transl_table=11 NZ_CP008943.1 RefSeq gene 22542 23402 . + . ID=gene21;Name=DJ40_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00110;old_locus_tag=DJ40_23 NZ_CP008943.1 Protein Homology CDS 22542 23402 . + 0 ID=cds21;Parent=gene21;Dbxref=Genbank:WP_011192523.1;Name=WP_011192523.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_011192523.1;transl_table=11 NZ_CP008943.1 RefSeq gene 23462 24067 . - . ID=gene22;Name=DJ40_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00115;old_locus_tag=DJ40_24 NZ_CP008943.1 Protein Homology CDS 23462 24067 . - 0 ID=cds22;Parent=gene22;Dbxref=Genbank:WP_038399789.1;Name=WP_038399789.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_038399789.1;transl_table=11 NZ_CP008943.1 RefSeq gene 24324 24587 . - . ID=gene23;Name=DJ40_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00120;old_locus_tag=DJ40_25 NZ_CP008943.1 Protein Homology CDS 24324 24587 . - 0 ID=cds23;Parent=gene23;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11 NZ_CP008943.1 RefSeq gene 24833 25423 . - . ID=gene24;Name=DJ40_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00125;old_locus_tag=DJ40_26 NZ_CP008943.1 Protein Homology CDS 24833 25423 . - 0 ID=cds24;Parent=gene24;Dbxref=Genbank:WP_002210965.1;Name=WP_002210965.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210965.1;transl_table=11 NZ_CP008943.1 RefSeq gene 25679 27184 . - . ID=gene25;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=DJ40_RS00130;old_locus_tag=DJ40_27 NZ_CP008943.1 Protein Homology CDS 25679 27184 . - 0 ID=cds25;Parent=gene25;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11 NZ_CP008943.1 RefSeq gene 27827 29089 . - . ID=gene26;Name=DJ40_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00135;old_locus_tag=DJ40_29 NZ_CP008943.1 Protein Homology CDS 27827 29089 . - 0 ID=cds26;Parent=gene26;Dbxref=Genbank:WP_038399791.1;Name=WP_038399791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399791.1;transl_table=11 NZ_CP008943.1 RefSeq gene 29479 30294 . - . ID=gene27;Name=DJ40_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00140;old_locus_tag=DJ40_30 NZ_CP008943.1 Protein Homology CDS 29479 30294 . - 0 ID=cds27;Parent=gene27;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11 NZ_CP008943.1 RefSeq gene 30294 31286 . - . ID=gene28;Name=DJ40_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00145;old_locus_tag=DJ40_31 NZ_CP008943.1 Protein Homology CDS 30294 31286 . - 0 ID=cds28;Parent=gene28;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11 NZ_CP008943.1 RefSeq gene 31286 32176 . - . ID=gene29;Name=DJ40_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00150;old_locus_tag=DJ40_32 NZ_CP008943.1 Protein Homology CDS 31286 32176 . - 0 ID=cds29;Parent=gene29;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 32163 33128 . - . ID=gene30;Name=DJ40_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00155;old_locus_tag=DJ40_33 NZ_CP008943.1 Protein Homology CDS 32163 33128 . - 0 ID=cds30;Parent=gene30;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11 NZ_CP008943.1 RefSeq gene 33125 34768 . - . ID=gene31;Name=DJ40_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00160;old_locus_tag=DJ40_34 NZ_CP008943.1 Protein Homology CDS 33125 34768 . - 0 ID=cds31;Parent=gene31;Dbxref=Genbank:WP_011192522.1;Name=WP_011192522.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein sapA;protein_id=WP_011192522.1;transl_table=11 NZ_CP008943.1 RefSeq gene 34904 35112 . - . ID=gene32;Name=DJ40_RS00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00165;pseudo=true NZ_CP008943.1 Protein Homology CDS 34904 35112 . - 0 ID=cds32;Parent=gene32;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 35369 36397 . - . ID=gene33;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=DJ40_RS00170;old_locus_tag=DJ40_35 NZ_CP008943.1 Protein Homology CDS 35369 36397 . - 0 ID=cds33;Parent=gene33;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11 NZ_CP008943.1 RefSeq gene 36642 37307 . + . ID=gene34;Name=DJ40_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00175;old_locus_tag=DJ40_36 NZ_CP008943.1 Protein Homology CDS 36642 37307 . + 0 ID=cds34;Parent=gene34;Dbxref=Genbank:WP_011192521.1;Name=WP_011192521.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_011192521.1;transl_table=11 NZ_CP008943.1 RefSeq gene 37469 37696 . + . ID=gene35;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=DJ40_RS00180;old_locus_tag=DJ40_37 NZ_CP008943.1 Protein Homology CDS 37469 37696 . + 0 ID=cds35;Parent=gene35;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11 NZ_CP008943.1 RefSeq gene 37696 38055 . + . ID=gene36;Name=DJ40_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00185;old_locus_tag=DJ40_38 NZ_CP008943.1 Protein Homology CDS 37696 38055 . + 0 ID=cds36;Parent=gene36;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11 NZ_CP008943.1 RefSeq gene 38143 38382 . + . ID=gene37;Name=DJ40_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00190;old_locus_tag=DJ40_39 NZ_CP008943.1 Protein Homology CDS 38143 38382 . + 0 ID=cds37;Parent=gene37;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11 NZ_CP008943.1 RefSeq gene 38363 39760 . + . ID=gene38;Name=DJ40_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00195;old_locus_tag=DJ40_40 NZ_CP008943.1 Protein Homology CDS 38363 39760 . + 0 ID=cds38;Parent=gene38;Dbxref=Genbank:WP_038399793.1;Name=WP_038399793.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399793.1;transl_table=11 NZ_CP008943.1 RefSeq gene 39757 40818 . + . ID=gene39;Name=DJ40_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00200;old_locus_tag=DJ40_41 NZ_CP008943.1 Protein Homology CDS 39757 40818 . + 0 ID=cds39;Parent=gene39;Dbxref=Genbank:WP_012105044.1;Name=WP_012105044.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105044.1;transl_table=11 NZ_CP008943.1 RefSeq gene 40828 41286 . - . ID=gene40;Name=DJ40_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00205;old_locus_tag=DJ40_42 NZ_CP008943.1 Protein Homology CDS 40828 41286 . - 0 ID=cds40;Parent=gene40;Dbxref=Genbank:WP_002210981.1;Name=WP_002210981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210981.1;transl_table=11 NZ_CP008943.1 RefSeq gene 41348 41794 . - . ID=gene41;Name=DJ40_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00210;old_locus_tag=DJ40_43 NZ_CP008943.1 Protein Homology CDS 41348 41794 . - 0 ID=cds41;Parent=gene41;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11 NZ_CP008943.1 RefSeq gene 42131 43708 . + . ID=gene42;Name=DJ40_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00215;old_locus_tag=DJ40_44 NZ_CP008943.1 Protein Homology CDS 42131 43708 . + 0 ID=cds42;Parent=gene42;Dbxref=Genbank:WP_011192519.1;Name=WP_011192519.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192519.1;transl_table=11 NZ_CP008943.1 RefSeq gene 43855 44358 . - . ID=gene43;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=DJ40_RS00220;old_locus_tag=DJ40_45 NZ_CP008943.1 Protein Homology CDS 43855 44358 . - 0 ID=cds43;Parent=gene43;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NZ_CP008943.1 RefSeq gene 44521 45495 . + . ID=gene44;Name=DJ40_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00225;old_locus_tag=DJ40_46 NZ_CP008943.1 Protein Homology CDS 44521 45495 . + 0 ID=cds44;Parent=gene44;Dbxref=Genbank:WP_002210985.1;Name=WP_002210985.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=mandelate racemase;protein_id=WP_002210985.1;transl_table=11 NZ_CP008943.1 RefSeq gene 45537 46244 . - . ID=gene45;Name=DJ40_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00230;old_locus_tag=DJ40_47 NZ_CP008943.1 Protein Homology CDS 45537 46244 . - 0 ID=cds45;Parent=gene45;Dbxref=Genbank:WP_002220315.1;Name=WP_002220315.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_002220315.1;transl_table=11 NZ_CP008943.1 RefSeq gene 46689 48305 . + . ID=gene46;Name=DJ40_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00235;old_locus_tag=DJ40_48 NZ_CP008943.1 Protein Homology CDS 46689 48305 . + 0 ID=cds46;Parent=gene46;Dbxref=Genbank:WP_002210987.1;Name=WP_002210987.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11 NZ_CP008943.1 RefSeq gene 48548 49531 . + . ID=gene47;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=DJ40_RS00240;old_locus_tag=DJ40_49 NZ_CP008943.1 Protein Homology CDS 48548 49531 . + 0 ID=cds47;Parent=gene47;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NZ_CP008943.1 RefSeq gene 49646 49855 . + . ID=gene48;Name=DJ40_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00245 NZ_CP008943.1 Protein Homology CDS 49646 49855 . + 0 ID=cds48;Parent=gene48;Dbxref=Genbank:WP_002223628.1;Name=WP_002223628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223628.1;transl_table=11 NZ_CP008943.1 RefSeq gene 49905 50743 . - . ID=gene49;Name=DJ40_RS00250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00250;pseudo=true NZ_CP008943.1 Protein Homology CDS 49905 50743 . - 0 ID=cds49;Parent=gene49;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 51055 52059 . - . ID=gene50;Name=DJ40_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00255;old_locus_tag=DJ40_52 NZ_CP008943.1 Protein Homology CDS 51055 52059 . - 0 ID=cds50;Parent=gene50;Dbxref=Genbank:WP_012105048.1;Name=WP_012105048.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_012105048.1;transl_table=11 NZ_CP008943.1 RefSeq gene 52330 53271 . - . ID=gene51;Name=DJ40_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00260;old_locus_tag=DJ40_54 NZ_CP008943.1 Protein Homology CDS 52330 53271 . - 0 ID=cds51;Parent=gene51;Dbxref=Genbank:WP_002210992.1;Name=WP_002210992.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_002210992.1;transl_table=11 NZ_CP008943.1 RefSeq gene 53556 57089 . - . ID=gene52;Name=DJ40_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00265;old_locus_tag=DJ40_55 NZ_CP008943.1 Protein Homology CDS 53556 57089 . - 0 ID=cds52;Parent=gene52;Dbxref=Genbank:WP_038399796.1;Name=WP_038399796.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_038399796.1;transl_table=11 NZ_CP008943.1 RefSeq gene 57568 57900 . + . ID=gene53;Name=DJ40_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00270;old_locus_tag=DJ40_56 NZ_CP008943.1 Protein Homology CDS 57568 57900 . + 0 ID=cds53;Parent=gene53;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11 NZ_CP008943.1 RefSeq gene 57960 58619 . - . ID=gene54;Name=DJ40_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00275;old_locus_tag=DJ40_57 NZ_CP008943.1 Protein Homology CDS 57960 58619 . - 0 ID=cds54;Parent=gene54;Dbxref=Genbank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002210995.1;transl_table=11 NZ_CP008943.1 RefSeq gene 58952 59263 . + . ID=gene55;Name=DJ40_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00280;old_locus_tag=DJ40_58 NZ_CP008943.1 Protein Homology CDS 58952 59263 . + 0 ID=cds55;Parent=gene55;Dbxref=Genbank:WP_024062893.1;Name=WP_024062893.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024062893.1;transl_table=11 NZ_CP008943.1 RefSeq gene 59321 59773 . - . ID=gene56;Name=DJ40_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00285;old_locus_tag=DJ40_59 NZ_CP008943.1 Protein Homology CDS 59321 59773 . - 0 ID=cds56;Parent=gene56;Dbxref=Genbank:WP_012105050.1;Name=WP_012105050.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_012105050.1;transl_table=11 NZ_CP008943.1 RefSeq gene 59843 60835 . - . ID=gene57;Name=DJ40_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00290;old_locus_tag=DJ40_60 NZ_CP008943.1 Protein Homology CDS 59843 60835 . - 0 ID=cds57;Parent=gene57;Dbxref=Genbank:WP_012105052.1;Name=WP_012105052.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_012105052.1;transl_table=11 NZ_CP008943.1 RefSeq gene 61101 63815 . + . ID=gene58;Name=DJ40_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00295;old_locus_tag=DJ40_61 NZ_CP008943.1 Protein Homology CDS 61101 63815 . + 0 ID=cds58;Parent=gene58;Dbxref=Genbank:WP_038399798.1;Name=WP_038399798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399798.1;transl_table=11 NZ_CP008943.1 RefSeq gene 63812 64006 . + . ID=gene59;Name=DJ40_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00300;old_locus_tag=DJ40_62 NZ_CP008943.1 Protein Homology CDS 63812 64006 . + 0 ID=cds59;Parent=gene59;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11 NZ_CP008943.1 RefSeq gene 64016 64387 . + . ID=gene60;Name=DJ40_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00305;old_locus_tag=DJ40_63 NZ_CP008943.1 Protein Homology CDS 64016 64387 . + 0 ID=cds60;Parent=gene60;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11 NZ_CP008943.1 RefSeq gene 64660 66051 . - . ID=gene61;Name=DJ40_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00310;old_locus_tag=DJ40_64 NZ_CP008943.1 Protein Homology CDS 64660 66051 . - 0 ID=cds61;Parent=gene61;Dbxref=Genbank:WP_032466441.1;Name=WP_032466441.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_032466441.1;transl_table=11 NZ_CP008943.1 RefSeq gene 66261 67217 . + . ID=gene62;Name=DJ40_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00315;old_locus_tag=DJ40_65 NZ_CP008943.1 Protein Homology CDS 66261 67217 . + 0 ID=cds62;Parent=gene62;Dbxref=Genbank:WP_032466440.1;Name=WP_032466440.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_032466440.1;transl_table=11 NZ_CP008943.1 RefSeq gene 67338 67943 . - . ID=gene63;Name=DJ40_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00320;old_locus_tag=DJ40_66 NZ_CP008943.1 Protein Homology CDS 67338 67943 . - 0 ID=cds63;Parent=gene63;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NZ_CP008943.1 RefSeq gene 68433 72275 . + . ID=gene64;Name=DJ40_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00325;old_locus_tag=DJ40_67 NZ_CP008943.1 Protein Homology CDS 68433 72275 . + 0 ID=cds64;Parent=gene64;Dbxref=Genbank:WP_032466941.1;Name=WP_032466941.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_032466941.1;transl_table=11 NZ_CP008943.1 RefSeq gene 72614 72943 . + . ID=gene65;Name=DJ40_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00330;old_locus_tag=DJ40_68 NZ_CP008943.1 Protein Homology CDS 72614 72943 . + 0 ID=cds65;Parent=gene65;Dbxref=Genbank:WP_038399801.1;Name=WP_038399801.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399801.1;transl_table=11 NZ_CP008943.1 RefSeq gene 72940 73263 . + . ID=gene66;Name=DJ40_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00335;old_locus_tag=DJ40_69 NZ_CP008943.1 Protein Homology CDS 72940 73263 . + 0 ID=cds66;Parent=gene66;Dbxref=Genbank:WP_002211007.1;Name=WP_002211007.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211007.1;transl_table=11 NZ_CP008943.1 RefSeq gene 73319 74155 . - . ID=gene67;Name=DJ40_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00340;old_locus_tag=DJ40_70 NZ_CP008943.1 Protein Homology CDS 73319 74155 . - 0 ID=cds67;Parent=gene67;Dbxref=Genbank:WP_038399803.1;Name=WP_038399803.1;gbkey=CDS;product=serine protease;protein_id=WP_038399803.1;transl_table=11 NZ_CP008943.1 RefSeq gene 74489 74803 . - . ID=gene68;Name=DJ40_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00345;old_locus_tag=DJ40_71 NZ_CP008943.1 Protein Homology CDS 74489 74803 . - 0 ID=cds68;Parent=gene68;Dbxref=Genbank:WP_038399804.1;Name=WP_038399804.1;gbkey=CDS;product=acid-shock protein;protein_id=WP_038399804.1;transl_table=11 NZ_CP008943.1 RefSeq gene 74800 75012 . - . ID=gene69;Name=DJ40_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00350 NZ_CP008943.1 Protein Homology CDS 74800 75012 . - 0 ID=cds69;Parent=gene69;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11 NZ_CP008943.1 RefSeq gene 75457 76011 . + . ID=gene70;Name=DJ40_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00355;old_locus_tag=DJ40_72 NZ_CP008943.1 Protein Homology CDS 75457 76011 . + 0 ID=cds70;Parent=gene70;Dbxref=Genbank:WP_038399805.1;Name=WP_038399805.1;gbkey=CDS;product=cytochrome B561;protein_id=WP_038399805.1;transl_table=11 NZ_CP008943.1 RefSeq gene 76037 76615 . + . ID=gene71;Name=DJ40_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00360;old_locus_tag=DJ40_73 NZ_CP008943.1 Protein Homology CDS 76037 76615 . + 0 ID=cds71;Parent=gene71;Dbxref=Genbank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211011.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 76653 76824 . + . ID=id2;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 77179 77373 . + . ID=gene72;Name=DJ40_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00365 NZ_CP008943.1 Protein Homology CDS 77179 77373 . + 0 ID=cds72;Parent=gene72;Dbxref=Genbank:WP_042592828.1;Name=WP_042592828.1;gbkey=CDS;product=invertase;protein_id=WP_042592828.1;transl_table=11 NZ_CP008943.1 RefSeq gene 77442 80426 . - . ID=gene73;Name=DJ40_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00370;old_locus_tag=DJ40_74 NZ_CP008943.1 Protein Homology CDS 77442 80426 . - 0 ID=cds73;Parent=gene73;Dbxref=Genbank:WP_038399807.1;Name=WP_038399807.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_038399807.1;transl_table=11 NZ_CP008943.1 RefSeq gene 81266 82765 . - . ID=gene74;Name=DJ40_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00375;old_locus_tag=DJ40_75 NZ_CP008943.1 Protein Homology CDS 81266 82765 . - 0 ID=cds74;Parent=gene74;Dbxref=Genbank:WP_012105060.1;Name=WP_012105060.1;gbkey=CDS;product=peptidase M32;protein_id=WP_012105060.1;transl_table=11 NZ_CP008943.1 RefSeq gene 82843 84147 . - . ID=gene75;Name=DJ40_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00380;old_locus_tag=DJ40_76 NZ_CP008943.1 Protein Homology CDS 82843 84147 . - 0 ID=cds75;Parent=gene75;Dbxref=Genbank:WP_002232819.1;Name=WP_002232819.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002232819.1;transl_table=11 NZ_CP008943.1 RefSeq gene 84147 84893 . - . ID=gene76;Name=DJ40_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00385;old_locus_tag=DJ40_77 NZ_CP008943.1 Protein Homology CDS 84147 84893 . - 0 ID=cds76;Parent=gene76;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11 NZ_CP008943.1 RefSeq gene 85190 85606 . + . ID=gene77;Name=DJ40_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00390;old_locus_tag=DJ40_78 NZ_CP008943.1 Protein Homology CDS 85190 85606 . + 0 ID=cds77;Parent=gene77;Dbxref=Genbank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 85630 87021 . - . ID=gene78;Name=DJ40_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00395;old_locus_tag=DJ40_79 NZ_CP008943.1 Protein Homology CDS 85630 87021 . - 0 ID=cds78;Parent=gene78;Dbxref=Genbank:WP_038399809.1;Name=WP_038399809.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_038399809.1;transl_table=11 NZ_CP008943.1 RefSeq gene 87291 88244 . - . ID=gene79;Name=DJ40_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00400;old_locus_tag=DJ40_80 NZ_CP008943.1 Protein Homology CDS 87291 88244 . - 0 ID=cds79;Parent=gene79;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11 NZ_CP008943.1 RefSeq gene 88450 88653 . + . ID=gene80;Name=DJ40_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00405 NZ_CP008943.1 Protein Homology CDS 88450 88653 . + 0 ID=cds80;Parent=gene80;Dbxref=Genbank:WP_011192504.1;Name=WP_011192504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192504.1;transl_table=11 NZ_CP008943.1 RefSeq gene 88774 90300 . + . ID=gene81;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=DJ40_RS00410;old_locus_tag=DJ40_81 NZ_CP008943.1 Protein Homology CDS 88774 90300 . + 0 ID=cds81;Parent=gene81;Dbxref=Genbank:WP_002211019.1;Name=WP_002211019.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_002211019.1;transl_table=11 NZ_CP008943.1 RefSeq gene 90373 91767 . + . ID=gene82;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=DJ40_RS00415;old_locus_tag=DJ40_82 NZ_CP008943.1 Protein Homology CDS 90373 91767 . + 0 ID=cds82;Parent=gene82;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11 NZ_CP008943.1 RefSeq gene 91858 92814 . - . ID=gene83;Name=DJ40_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00420;old_locus_tag=DJ40_83 NZ_CP008943.1 Protein Homology CDS 91858 92814 . - 0 ID=cds83;Parent=gene83;Dbxref=Genbank:WP_038399811.1;Name=WP_038399811.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein UspE;protein_id=WP_038399811.1;transl_table=11 NZ_CP008943.1 RefSeq gene 92949 93701 . - . ID=gene84;Name=DJ40_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00425;old_locus_tag=DJ40_84 NZ_CP008943.1 Protein Homology CDS 92949 93701 . - 0 ID=cds84;Parent=gene84;Dbxref=Genbank:WP_011192502.1;Name=WP_011192502.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate/nitrate reduction transcriptional regulator;protein_id=WP_011192502.1;transl_table=11 NZ_CP008943.1 RefSeq gene 93774 94292 . - . ID=gene85;Name=DJ40_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00430;old_locus_tag=DJ40_85 NZ_CP008943.1 Protein Homology CDS 93774 94292 . - 0 ID=cds85;Parent=gene85;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11 NZ_CP008943.1 RefSeq gene 94550 95995 . + . ID=gene86;Name=DJ40_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00435;old_locus_tag=DJ40_86 NZ_CP008943.1 Protein Homology CDS 94550 95995 . + 0 ID=cds86;Parent=gene86;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NZ_CP008943.1 RefSeq gene 96542 97553 . + . ID=gene87;Name=DJ40_RS00440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00440;pseudo=true NZ_CP008943.1 Protein Homology CDS 96542 97553 . + 0 ID=cds87;Parent=gene87;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 97553 98938 . + . ID=gene88;Name=DJ40_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00445 NZ_CP008943.1 Protein Homology CDS 97553 98938 . + 0 ID=cds88;Parent=gene88;Dbxref=Genbank:WP_032466433.1;Name=WP_032466433.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466433.1;transl_table=11 NZ_CP008943.1 RefSeq gene 99084 99758 . + . ID=gene89;Name=DJ40_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00450;old_locus_tag=DJ40_88 NZ_CP008943.1 Protein Homology CDS 99084 99758 . + 0 ID=cds89;Parent=gene89;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11 NZ_CP008943.1 RefSeq gene 99825 100112 . - . ID=gene90;Name=DJ40_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00455;old_locus_tag=DJ40_89 NZ_CP008943.1 Protein Homology CDS 99825 100112 . - 0 ID=cds90;Parent=gene90;Dbxref=Genbank:WP_029793741.1;Name=WP_029793741.1;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;gbkey=CDS;product=acetolactate synthase 1 regulatory subunit;protein_id=WP_029793741.1;transl_table=11 NZ_CP008943.1 RefSeq gene 100174 101841 . - . ID=gene91;Name=DJ40_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00460;old_locus_tag=DJ40_90 NZ_CP008943.1 Protein Homology CDS 100174 101841 . - 0 ID=cds91;Parent=gene91;Dbxref=Genbank:WP_011192500.1;Name=WP_011192500.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_011192500.1;transl_table=11 NZ_CP008943.1 RefSeq gene 102401 103195 . + . ID=gene92;Name=DJ40_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00465;old_locus_tag=DJ40_91 NZ_CP008943.1 Protein Homology CDS 102401 103195 . + 0 ID=cds92;Parent=gene92;Dbxref=Genbank:WP_012304048.1;Name=WP_012304048.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304048.1;transl_table=11 NZ_CP008943.1 RefSeq gene 103364 105904 . - . ID=gene93;Name=DJ40_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00470;old_locus_tag=DJ40_92 NZ_CP008943.1 Protein Homology CDS 103364 105904 . - 0 ID=cds93;Parent=gene93;Dbxref=Genbank:WP_038399814.1;Name=WP_038399814.1;gbkey=CDS;product=virulence factor;protein_id=WP_038399814.1;transl_table=11 NZ_CP008943.1 RefSeq gene 105901 108972 . - . ID=gene94;Name=DJ40_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00475;old_locus_tag=DJ40_93 NZ_CP008943.1 Protein Homology CDS 105901 108972 . - 0 ID=cds94;Parent=gene94;Dbxref=Genbank:WP_012105067.1;Name=WP_012105067.1;gbkey=CDS;product=virulence factor SrfB;protein_id=WP_012105067.1;transl_table=11 NZ_CP008943.1 RefSeq gene 108977 110455 . - . ID=gene95;Name=DJ40_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00480;old_locus_tag=DJ40_94 NZ_CP008943.1 Protein Homology CDS 108977 110455 . - 0 ID=cds95;Parent=gene95;Dbxref=Genbank:WP_038399815.1;Name=WP_038399815.1;gbkey=CDS;product=virulence factor;protein_id=WP_038399815.1;transl_table=11 NZ_CP008943.1 RefSeq gene 110661 112151 . + . ID=gene96;Name=DJ40_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00485;old_locus_tag=DJ40_95 NZ_CP008943.1 Protein Homology CDS 110661 112151 . + 0 ID=cds96;Parent=gene96;Dbxref=Genbank:WP_002223601.1;Name=WP_002223601.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_002223601.1;transl_table=11 NZ_CP008943.1 RefSeq gene 112576 113394 . - . ID=gene97;Name=DJ40_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00490;old_locus_tag=DJ40_96 NZ_CP008943.1 Protein Homology CDS 112576 113394 . - 0 ID=cds97;Parent=gene97;Dbxref=Genbank:WP_002223602.1;Name=WP_002223602.1;gbkey=CDS;product=sulfonate ABC transporter ATP-binding protein;protein_id=WP_002223602.1;transl_table=11 NZ_CP008943.1 RefSeq gene 113404 114225 . - . ID=gene98;Name=DJ40_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00495;old_locus_tag=DJ40_97 NZ_CP008943.1 Protein Homology CDS 113404 114225 . - 0 ID=cds98;Parent=gene98;Dbxref=Genbank:WP_002211034.1;Name=WP_002211034.1;gbkey=CDS;product=sulfonate ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NZ_CP008943.1 RefSeq gene 114229 115260 . - . ID=gene99;Name=DJ40_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00500;old_locus_tag=DJ40_98 NZ_CP008943.1 Protein Homology CDS 114229 115260 . - 0 ID=cds99;Parent=gene99;Dbxref=Genbank:WP_038399817.1;Name=WP_038399817.1;gbkey=CDS;product=myristoyl transferase;protein_id=WP_038399817.1;transl_table=11 NZ_CP008943.1 RefSeq gene 116015 116668 . + . ID=gene100;Name=DJ40_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00505;old_locus_tag=DJ40_99 NZ_CP008943.1 Protein Homology CDS 116015 116668 . + 0 ID=cds100;Parent=gene100;Dbxref=Genbank:WP_012105069.1;Name=WP_012105069.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105069.1;transl_table=11 NZ_CP008943.1 RefSeq gene 116665 118203 . + . ID=gene101;Name=DJ40_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00510;old_locus_tag=DJ40_100 NZ_CP008943.1 Protein Homology CDS 116665 118203 . + 0 ID=cds101;Parent=gene101;Dbxref=Genbank:WP_011192492.1;Name=WP_011192492.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192492.1;transl_table=11 NZ_CP008943.1 RefSeq gene 118248 119291 . + . ID=gene102;Name=DJ40_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00515;old_locus_tag=DJ40_101 NZ_CP008943.1 Protein Homology CDS 118248 119291 . + 0 ID=cds102;Parent=gene102;Dbxref=Genbank:WP_042592909.1;Name=WP_042592909.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_042592909.1;transl_table=11 NZ_CP008943.1 RefSeq gene 119530 120501 . + . ID=gene103;Name=DJ40_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00520;old_locus_tag=DJ40_102 NZ_CP008943.1 Protein Homology CDS 119530 120501 . + 0 ID=cds103;Parent=gene103;Dbxref=Genbank:WP_038399819.1;Name=WP_038399819.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_038399819.1;transl_table=11 NZ_CP008943.1 RefSeq gene 120624 121094 . + . ID=gene104;Name=DJ40_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00525;old_locus_tag=DJ40_103 NZ_CP008943.1 Protein Homology CDS 120624 121094 . + 0 ID=cds104;Parent=gene104;Dbxref=Genbank:WP_011192489.1;Name=WP_011192489.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192489.1;transl_table=11 NZ_CP008943.1 RefSeq gene 121158 122174 . + . ID=gene105;Name=DJ40_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00530;old_locus_tag=DJ40_104 NZ_CP008943.1 Protein Homology CDS 121158 122174 . + 0 ID=cds105;Parent=gene105;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NZ_CP008943.1 RefSeq gene 122319 123773 . + . ID=gene106;Name=DJ40_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00535;old_locus_tag=DJ40_105 NZ_CP008943.1 Protein Homology CDS 122319 123773 . + 0 ID=cds106;Parent=gene106;Dbxref=Genbank:WP_033847898.1;Name=WP_033847898.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_033847898.1;transl_table=11 NZ_CP008943.1 RefSeq gene 123760 124938 . + . ID=gene107;Name=DJ40_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00540;old_locus_tag=DJ40_106 NZ_CP008943.1 Protein Homology CDS 123760 124938 . + 0 ID=cds107;Parent=gene107;Dbxref=Genbank:WP_011192488.1;Name=WP_011192488.1;gbkey=CDS;product=aminotransferase;protein_id=WP_011192488.1;transl_table=11 NZ_CP008943.1 RefSeq gene 125086 125218 . + . ID=gene108;Name=DJ40_RS00545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00545;pseudo=true NZ_CP008943.1 Protein Homology CDS 125086 125218 . + 0 ID=cds108;Parent=gene108;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 125766 126689 . - . ID=gene109;Name=DJ40_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00550;old_locus_tag=DJ40_107 NZ_CP008943.1 Protein Homology CDS 125766 126689 . - 0 ID=cds109;Parent=gene109;Dbxref=Genbank:WP_011192487.1;Name=WP_011192487.1;gbkey=CDS;product=drug/metabolite transporter DMT permease;protein_id=WP_011192487.1;transl_table=11 NZ_CP008943.1 RefSeq gene 127263 128793 . + . ID=gene110;Name=DJ40_RS00555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00555;pseudo=true NZ_CP008943.1 Protein Homology CDS 127263 128793 . + 0 ID=cds110;Parent=gene110;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 129074 130594 . - . ID=gene111;Name=DJ40_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00560;old_locus_tag=DJ40_110 NZ_CP008943.1 Protein Homology CDS 129074 130594 . - 0 ID=cds111;Parent=gene111;Dbxref=Genbank:WP_011192485.1;Name=WP_011192485.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_011192485.1;transl_table=11 NZ_CP008943.1 RefSeq gene 130890 132692 . + . ID=gene112;Name=DJ40_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00565;old_locus_tag=DJ40_111 NZ_CP008943.1 Protein Homology CDS 130890 132692 . + 0 ID=cds112;Parent=gene112;Dbxref=Genbank:WP_038399821.1;Name=WP_038399821.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_038399821.1;transl_table=11 NZ_CP008943.1 RefSeq gene 132806 133555 . + . ID=gene113;Name=DJ40_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00570;old_locus_tag=DJ40_112 NZ_CP008943.1 Protein Homology CDS 132806 133555 . + 0 ID=cds113;Parent=gene113;Dbxref=Genbank:WP_011192483.1;Name=WP_011192483.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;product=malonic semialdehyde reductase;protein_id=WP_011192483.1;transl_table=11 NZ_CP008943.1 RefSeq gene 133785 134156 . + . ID=gene114;Name=DJ40_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00575;old_locus_tag=DJ40_113 NZ_CP008943.1 Protein Homology CDS 133785 134156 . + 0 ID=cds114;Parent=gene114;Dbxref=Genbank:WP_038399823.1;Name=WP_038399823.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399823.1;transl_table=11 NZ_CP008943.1 RefSeq gene 134370 134615 . + . ID=gene115;Name=DJ40_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00580;old_locus_tag=DJ40_114 NZ_CP008943.1 Protein Homology CDS 134370 134615 . + 0 ID=cds115;Parent=gene115;Dbxref=Genbank:WP_011192481.1;Name=WP_011192481.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192481.1;transl_table=11 NZ_CP008943.1 RefSeq gene 134761 136041 . + . ID=gene116;Name=DJ40_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00585;old_locus_tag=DJ40_115 NZ_CP008943.1 Protein Homology CDS 134761 136041 . + 0 ID=cds116;Parent=gene116;Dbxref=Genbank:WP_012413730.1;Name=WP_012413730.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_012413730.1;transl_table=11 NZ_CP008943.1 RefSeq gene 136127 136795 . - . ID=gene117;Name=DJ40_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00590;old_locus_tag=DJ40_116 NZ_CP008943.1 Protein Homology CDS 136127 136795 . - 0 ID=cds117;Parent=gene117;Dbxref=Genbank:WP_002210575.1;Name=WP_002210575.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002210575.1;transl_table=11 NZ_CP008943.1 RefSeq gene 137019 138038 . - . ID=gene118;Name=DJ40_RS00595;end_range=138038,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00595;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 137019 138038 . - 0 ID=cds118;Parent=gene118;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;end_range=138038,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 138596 139894 . + . ID=gene119;Name=DJ40_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00600;old_locus_tag=DJ40_119 NZ_CP008943.1 Protein Homology CDS 138596 139894 . + 0 ID=cds119;Parent=gene119;Dbxref=Genbank:WP_038399825.1;Name=WP_038399825.1;gbkey=CDS;product=membrane protein;protein_id=WP_038399825.1;transl_table=11 NZ_CP008943.1 RefSeq gene 140099 141034 . + . ID=gene120;Name=DJ40_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00605;old_locus_tag=DJ40_120 NZ_CP008943.1 Protein Homology CDS 140099 141034 . + 0 ID=cds120;Parent=gene120;Dbxref=Genbank:WP_002227921.1;Name=WP_002227921.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_002227921.1;transl_table=11 NZ_CP008943.1 RefSeq gene 141114 142511 . - . ID=gene121;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=DJ40_RS00610;old_locus_tag=DJ40_121 NZ_CP008943.1 Protein Homology CDS 141114 142511 . - 0 ID=cds121;Parent=gene121;Dbxref=Genbank:WP_011192475.1;Name=WP_011192475.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=WP_011192475.1;transl_table=11 NZ_CP008943.1 RefSeq gene 142795 143970 . + . ID=gene122;Name=DJ40_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00615;old_locus_tag=DJ40_122 NZ_CP008943.1 Protein Homology CDS 142795 143970 . + 0 ID=cds122;Parent=gene122;Dbxref=Genbank:WP_038399826.1;Name=WP_038399826.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_038399826.1;transl_table=11 NZ_CP008943.1 RefSeq gene 144210 145754 . + . ID=gene123;Name=DJ40_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00620;old_locus_tag=DJ40_123 NZ_CP008943.1 Protein Homology CDS 144210 145754 . + 0 ID=cds123;Parent=gene123;Dbxref=Genbank:WP_038399827.1;Name=WP_038399827.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_038399827.1;transl_table=11 NZ_CP008943.1 RefSeq gene 145803 146393 . - . ID=gene124;Name=DJ40_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00625;old_locus_tag=DJ40_124 NZ_CP008943.1 Protein Homology CDS 145803 146393 . - 0 ID=cds124;Parent=gene124;Dbxref=Genbank:WP_038399829.1;Name=WP_038399829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399829.1;transl_table=11 NZ_CP008943.1 RefSeq gene 146599 147627 . - . ID=gene125;Name=DJ40_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00630;old_locus_tag=DJ40_125 NZ_CP008943.1 Protein Homology CDS 146599 147627 . - 0 ID=cds125;Parent=gene125;Dbxref=Genbank:WP_011192468.1;Name=WP_011192468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192468.1;transl_table=11 NZ_CP008943.1 RefSeq gene 147821 148870 . - . ID=gene126;Name=DJ40_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00635;old_locus_tag=DJ40_126 NZ_CP008943.1 Protein Homology CDS 147821 148870 . - 0 ID=cds126;Parent=gene126;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NZ_CP008943.1 RefSeq gene 148998 149930 . - . ID=gene127;Name=DJ40_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00640;old_locus_tag=DJ40_127 NZ_CP008943.1 Protein Homology CDS 148998 149930 . - 0 ID=cds127;Parent=gene127;Dbxref=Genbank:WP_011192467.1;Name=WP_011192467.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011192467.1;transl_table=11 NZ_CP008943.1 RefSeq gene 150151 151200 . - . ID=gene128;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=DJ40_RS00645;old_locus_tag=DJ40_128 NZ_CP008943.1 Protein Homology CDS 150151 151200 . - 0 ID=cds128;Parent=gene128;Dbxref=Genbank:WP_011192466.1;Name=WP_011192466.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_011192466.1;transl_table=11 NZ_CP008943.1 RefSeq gene 151218 152789 . - . ID=gene129;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=DJ40_RS00650;old_locus_tag=DJ40_129 NZ_CP008943.1 Protein Homology CDS 151218 152789 . - 0 ID=cds129;Parent=gene129;Dbxref=Genbank:WP_012105090.1;Name=WP_012105090.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_012105090.1;transl_table=11 NZ_CP008943.1 RefSeq gene 152887 153870 . - . ID=gene130;Name=DJ40_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00655;old_locus_tag=DJ40_130 NZ_CP008943.1 Protein Homology CDS 152887 153870 . - 0 ID=cds130;Parent=gene130;Dbxref=Genbank:WP_002210589.1;Name=WP_002210589.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NZ_CP008943.1 RefSeq gene 154277 155980 . + . ID=gene131;Name=DJ40_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00660;old_locus_tag=DJ40_131 NZ_CP008943.1 Protein Homology CDS 154277 155980 . + 0 ID=cds131;Parent=gene131;Dbxref=Genbank:WP_011192464.1;Name=WP_011192464.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_011192464.1;transl_table=11 NZ_CP008943.1 RefSeq gene 156064 157566 . + . ID=gene132;Name=DJ40_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00665;old_locus_tag=DJ40_132 NZ_CP008943.1 Protein Homology CDS 156064 157566 . + 0 ID=cds132;Parent=gene132;Dbxref=Genbank:WP_038399831.1;Name=WP_038399831.1;gbkey=CDS;product=arabinose isomerase;protein_id=WP_038399831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 157778 159916 . - . ID=gene133;Name=DJ40_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00670;old_locus_tag=DJ40_133 NZ_CP008943.1 Protein Homology CDS 157778 159916 . - 0 ID=cds133;Parent=gene133;Dbxref=Genbank:WP_012105093.1;Name=WP_012105093.1;gbkey=CDS;product=peptidase C39;protein_id=WP_012105093.1;transl_table=11 NZ_CP008943.1 RefSeq gene 159918 161288 . - . ID=gene134;Name=DJ40_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00675;old_locus_tag=DJ40_134 NZ_CP008943.1 Protein Homology CDS 159918 161288 . - 0 ID=cds134;Parent=gene134;Dbxref=Genbank:WP_011192461.1;Name=WP_011192461.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_011192461.1;transl_table=11 NZ_CP008943.1 RefSeq gene 161313 163460 . - . ID=gene135;Name=DJ40_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00680;old_locus_tag=DJ40_135 NZ_CP008943.1 Protein Homology CDS 161313 163460 . - 0 ID=cds135;Parent=gene135;Dbxref=Genbank:WP_038399833.1;Name=WP_038399833.1;gbkey=CDS;product=peptidase C39;protein_id=WP_038399833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 163935 164378 . + . ID=gene136;Name=DJ40_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00685;old_locus_tag=DJ40_136 NZ_CP008943.1 Protein Homology CDS 163935 164378 . + 0 ID=cds136;Parent=gene136;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11 NZ_CP008943.1 RefSeq gene 164506 165087 . + . ID=gene137;Name=DJ40_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00690;old_locus_tag=DJ40_137 NZ_CP008943.1 Protein Homology CDS 164506 165087 . + 0 ID=cds137;Parent=gene137;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11 NZ_CP008943.1 RefSeq gene 165087 165710 . + . ID=gene138;Name=DJ40_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00695;old_locus_tag=DJ40_138 NZ_CP008943.1 Protein Homology CDS 165087 165710 . + 0 ID=cds138;Parent=gene138;Dbxref=Genbank:WP_038399835.1;Name=WP_038399835.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transporter RnfB;protein_id=WP_038399835.1;transl_table=11 NZ_CP008943.1 RefSeq gene 165703 167682 . + . ID=gene139;Name=DJ40_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00700;old_locus_tag=DJ40_139 NZ_CP008943.1 Protein Homology CDS 165703 167682 . + 0 ID=cds139;Parent=gene139;Dbxref=Genbank:WP_038399836.1;Name=WP_038399836.1;gbkey=CDS;product=electron transporter RnfC;protein_id=WP_038399836.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 167378 167659 . + . ID=id3;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 167787 168680 . - . ID=gene140;Name=DJ40_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00705;old_locus_tag=DJ40_140 NZ_CP008943.1 Protein Homology CDS 167787 168680 . - 0 ID=cds140;Parent=gene140;Dbxref=Genbank:WP_002210598.1;Name=WP_002210598.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210598.1;transl_table=11 NZ_CP008943.1 RefSeq gene 169169 170263 . + . ID=gene141;Name=DJ40_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00710;old_locus_tag=DJ40_141 NZ_CP008943.1 Protein Homology CDS 169169 170263 . + 0 ID=cds141;Parent=gene141;Dbxref=Genbank:WP_038399837.1;Name=WP_038399837.1;gbkey=CDS;product=electron transporter RnfD;protein_id=WP_038399837.1;transl_table=11 NZ_CP008943.1 RefSeq gene 170273 170902 . + . ID=gene142;Name=DJ40_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00715;old_locus_tag=DJ40_142 NZ_CP008943.1 Protein Homology CDS 170273 170902 . + 0 ID=cds142;Parent=gene142;Dbxref=Genbank:WP_002210600.1;Name=WP_002210600.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit G;protein_id=WP_002210600.1;transl_table=11 NZ_CP008943.1 RefSeq gene 170899 171600 . + . ID=gene143;Name=DJ40_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00720;old_locus_tag=DJ40_143 NZ_CP008943.1 Protein Homology CDS 170899 171600 . + 0 ID=cds143;Parent=gene143;Dbxref=Genbank:WP_012304077.1;Name=WP_012304077.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_012304077.1;transl_table=11 NZ_CP008943.1 RefSeq gene 171597 172238 . + . ID=gene144;Name=DJ40_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00725;old_locus_tag=DJ40_144 NZ_CP008943.1 Protein Homology CDS 171597 172238 . + 0 ID=cds144;Parent=gene144;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NZ_CP008943.1 RefSeq gene 172420 173418 . - . ID=gene145;Name=DJ40_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00730;old_locus_tag=DJ40_145 NZ_CP008943.1 Protein Homology CDS 172420 173418 . - 0 ID=cds145;Parent=gene145;Dbxref=Genbank:WP_032466416.1;Name=WP_032466416.1;gbkey=CDS;product=NAD-dependent epimerase;protein_id=WP_032466416.1;transl_table=11 NZ_CP008943.1 RefSeq gene 173470 174780 . - . ID=gene146;Name=DJ40_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00735;old_locus_tag=DJ40_146 NZ_CP008943.1 Protein Homology CDS 173470 174780 . - 0 ID=cds146;Parent=gene146;Dbxref=Genbank:WP_011192453.1;Name=WP_011192453.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011192453.1;transl_table=11 NZ_CP008943.1 RefSeq gene 175429 177363 . + . ID=gene147;Name=DJ40_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00740;old_locus_tag=DJ40_147 NZ_CP008943.1 Protein Homology CDS 175429 177363 . + 0 ID=cds147;Parent=gene147;Dbxref=Genbank:WP_038399839.1;Name=WP_038399839.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_038399839.1;transl_table=11 NZ_CP008943.1 RefSeq gene 177712 179778 . + . ID=gene148;Name=DJ40_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00745;old_locus_tag=DJ40_148 NZ_CP008943.1 Protein Homology CDS 177712 179778 . + 0 ID=cds148;Parent=gene148;Dbxref=Genbank:WP_032466414.1;Name=WP_032466414.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_032466414.1;transl_table=11 NZ_CP008943.1 RefSeq gene 179771 180076 . + . ID=gene149;Name=DJ40_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00750;old_locus_tag=DJ40_149 NZ_CP008943.1 Protein Homology CDS 179771 180076 . + 0 ID=cds149;Parent=gene149;Dbxref=Genbank:WP_042592831.1;Name=WP_042592831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 180193 180858 . - . ID=gene150;Name=DJ40_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00755;old_locus_tag=DJ40_150 NZ_CP008943.1 Protein Homology CDS 180193 180858 . - 0 ID=cds150;Parent=gene150;Dbxref=Genbank:WP_002215192.1;Name=WP_002215192.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11 NZ_CP008943.1 RefSeq gene 181192 181440 . + . ID=gene151;Name=DJ40_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00760;old_locus_tag=DJ40_151 NZ_CP008943.1 Protein Homology CDS 181192 181440 . + 0 ID=cds151;Parent=gene151;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11 NZ_CP008943.1 RefSeq gene 181469 182164 . - . ID=gene152;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=DJ40_RS00765;old_locus_tag=DJ40_152 NZ_CP008943.1 Protein Homology CDS 181469 182164 . - 0 ID=cds152;Parent=gene152;Dbxref=Genbank:WP_002210610.1;Name=WP_002210610.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NZ_CP008943.1 RefSeq gene 182644 182859 . + . ID=gene153;Name=DJ40_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00770;old_locus_tag=DJ40_153 NZ_CP008943.1 Protein Homology CDS 182644 182859 . + 0 ID=cds153;Parent=gene153;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11 NZ_CP008943.1 RefSeq gene 183115 183441 . - . ID=gene154;Name=DJ40_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00775;old_locus_tag=DJ40_154 NZ_CP008943.1 Protein Homology CDS 183115 183441 . - 0 ID=cds154;Parent=gene154;Dbxref=Genbank:WP_032466411.1;Name=WP_032466411.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_032466411.1;transl_table=11 NZ_CP008943.1 RefSeq gene 183441 184178 . - . ID=gene155;Name=DJ40_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00780;old_locus_tag=DJ40_155 NZ_CP008943.1 Protein Homology CDS 183441 184178 . - 0 ID=cds155;Parent=gene155;Dbxref=Genbank:WP_032466410.1;Name=WP_032466410.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_032466410.1;transl_table=11 NZ_CP008943.1 RefSeq gene 184647 184946 . + . ID=gene156;Name=DJ40_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00785;old_locus_tag=DJ40_156 NZ_CP008943.1 Protein Homology CDS 184647 184946 . + 0 ID=cds156;Parent=gene156;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NZ_CP008943.1 RefSeq gene 185068 186237 . - . ID=gene157;Name=DJ40_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00790;old_locus_tag=DJ40_157 NZ_CP008943.1 Protein Homology CDS 185068 186237 . - 0 ID=cds157;Parent=gene157;Dbxref=Genbank:WP_011192449.1;Name=WP_011192449.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192449.1;transl_table=11 NZ_CP008943.1 RefSeq gene 186244 186555 . - . ID=gene158;Name=DJ40_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00795;old_locus_tag=DJ40_158 NZ_CP008943.1 Protein Homology CDS 186244 186555 . - 0 ID=cds158;Parent=gene158;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11 NZ_CP008943.1 RefSeq gene 186736 187497 . - . ID=gene159;Name=DJ40_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00800;old_locus_tag=DJ40_159 NZ_CP008943.1 Protein Homology CDS 186736 187497 . - 0 ID=cds159;Parent=gene159;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NZ_CP008943.1 RefSeq gene 188003 188593 . + . ID=gene160;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=DJ40_RS00805;old_locus_tag=DJ40_160 NZ_CP008943.1 Protein Homology CDS 188003 188593 . + 0 ID=cds160;Parent=gene160;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11 NZ_CP008943.1 RefSeq gene 188757 191429 . - . ID=gene161;Name=DJ40_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00810;old_locus_tag=DJ40_161 NZ_CP008943.1 Protein Homology CDS 188757 191429 . - 0 ID=cds161;Parent=gene161;Dbxref=Genbank:WP_038399842.1;Name=WP_038399842.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_038399842.1;transl_table=11 NZ_CP008943.1 RefSeq gene 191793 192650 . - . ID=gene162;Name=DJ40_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00815;old_locus_tag=DJ40_162 NZ_CP008943.1 Protein Homology CDS 191793 192650 . - 0 ID=cds162;Parent=gene162;Dbxref=Genbank:WP_038399843.1;Name=WP_038399843.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399843.1;transl_table=11 NZ_CP008943.1 RefSeq gene 192986 193960 . - . ID=gene163;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=DJ40_RS00820;old_locus_tag=DJ40_163 NZ_CP008943.1 Protein Homology CDS 192986 193960 . - 0 ID=cds163;Parent=gene163;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11 NZ_CP008943.1 RefSeq gene 194357 196972 . - . ID=gene164;Name=DJ40_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00825;old_locus_tag=DJ40_164 NZ_CP008943.1 Protein Homology CDS 194357 196972 . - 0 ID=cds164;Parent=gene164;Dbxref=Genbank:WP_038399844.1;Name=WP_038399844.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_038399844.1;transl_table=11 NZ_CP008943.1 RefSeq gene 196999 197298 . - . ID=gene165;Name=DJ40_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00830;old_locus_tag=DJ40_165 NZ_CP008943.1 Protein Homology CDS 196999 197298 . - 0 ID=cds165;Parent=gene165;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NZ_CP008943.1 RefSeq gene 197391 197642 . + . ID=gene166;Name=DJ40_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00835;old_locus_tag=DJ40_166 NZ_CP008943.1 Protein Homology CDS 197391 197642 . + 0 ID=cds166;Parent=gene166;Dbxref=Genbank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210623.1;transl_table=11 NZ_CP008943.1 RefSeq gene 197761 198807 . - . ID=gene167;Name=DJ40_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00840;old_locus_tag=DJ40_167 NZ_CP008943.1 Protein Homology CDS 197761 198807 . - 0 ID=cds167;Parent=gene167;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11 NZ_CP008943.1 RefSeq gene 198979 199740 . + . ID=gene168;Name=DJ40_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00845;old_locus_tag=DJ40_168 NZ_CP008943.1 Protein Homology CDS 198979 199740 . + 0 ID=cds168;Parent=gene168;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11 NZ_CP008943.1 RefSeq gene 199757 200347 . + . ID=gene169;Name=DJ40_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00850;old_locus_tag=DJ40_169 NZ_CP008943.1 Protein Homology CDS 199757 200347 . + 0 ID=cds169;Parent=gene169;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11 NZ_CP008943.1 RefSeq gene 200470 201504 . - . ID=gene170;Name=DJ40_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00855;old_locus_tag=DJ40_170 NZ_CP008943.1 Protein Homology CDS 200470 201504 . - 0 ID=cds170;Parent=gene170;Dbxref=Genbank:WP_011192445.1;Name=WP_011192445.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_011192445.1;transl_table=11 NZ_CP008943.1 RefSeq gene 201817 202437 . - . ID=gene171;Name=DJ40_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00860;old_locus_tag=DJ40_171 NZ_CP008943.1 Protein Homology CDS 201817 202437 . - 0 ID=cds171;Parent=gene171;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11 NZ_CP008943.1 RefSeq gene 202454 203389 . - . ID=gene172;Name=DJ40_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00865;old_locus_tag=DJ40_172 NZ_CP008943.1 Protein Homology CDS 202454 203389 . - 0 ID=cds172;Parent=gene172;Dbxref=Genbank:WP_038399847.1;Name=WP_038399847.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_038399847.1;transl_table=11 NZ_CP008943.1 RefSeq gene 203470 203598 . + . ID=gene173;Name=DJ40_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00870 NZ_CP008943.1 Protein Homology CDS 203470 203598 . + 0 ID=cds173;Parent=gene173;Dbxref=Genbank:WP_038399848.1;Name=WP_038399848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399848.1;transl_table=11 NZ_CP008943.1 RefSeq gene 203627 203689 . + . ID=gene174;Name=DJ40_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00875 NZ_CP008943.1 Protein Homology CDS 203627 203689 . + 0 ID=cds174;Parent=gene174;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 203808 205370 . + . ID=gene175;Name=DJ40_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00880;old_locus_tag=DJ40_173 NZ_CP008943.1 Protein Homology CDS 203808 205370 . + 0 ID=cds175;Parent=gene175;Dbxref=Genbank:WP_002228454.1;Name=WP_002228454.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase subunit I;protein_id=WP_002228454.1;transl_table=11 NZ_CP008943.1 RefSeq gene 205370 205948 . + . ID=gene176;Name=DJ40_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00885;old_locus_tag=DJ40_174 NZ_CP008943.1 Protein Homology CDS 205370 205948 . + 0 ID=cds176;Parent=gene176;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11 NZ_CP008943.1 RefSeq gene 205963 206961 . + . ID=gene177;Name=DJ40_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00890;old_locus_tag=DJ40_175 NZ_CP008943.1 Protein Homology CDS 205963 206961 . + 0 ID=cds177;Parent=gene177;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11 NZ_CP008943.1 RefSeq gene 206965 208392 . + . ID=gene178;Name=DJ40_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00895;old_locus_tag=DJ40_176 NZ_CP008943.1 Protein Homology CDS 206965 208392 . + 0 ID=cds178;Parent=gene178;Dbxref=Genbank:WP_011192443.1;Name=WP_011192443.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=phosphoribosylanthranilate isomerase;protein_id=WP_011192443.1;transl_table=11 NZ_CP008943.1 RefSeq gene 208527 209717 . + . ID=gene179;Name=DJ40_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00900;old_locus_tag=DJ40_177 NZ_CP008943.1 Protein Homology CDS 208527 209717 . + 0 ID=cds179;Parent=gene179;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NZ_CP008943.1 RefSeq gene 209717 210523 . + . ID=gene180;Name=DJ40_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00905;old_locus_tag=DJ40_178 NZ_CP008943.1 Protein Homology CDS 209717 210523 . + 0 ID=cds180;Parent=gene180;Dbxref=Genbank:WP_011192442.1;Name=WP_011192442.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_011192442.1;transl_table=11 NZ_CP008943.1 RefSeq gene 210866 211180 . + . ID=gene181;Name=DJ40_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00910;old_locus_tag=DJ40_179 NZ_CP008943.1 Protein Homology CDS 210866 211180 . + 0 ID=cds181;Parent=gene181;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11 NZ_CP008943.1 RefSeq gene 211327 211974 . - . ID=gene182;Name=DJ40_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00915;old_locus_tag=DJ40_180 NZ_CP008943.1 Protein Homology CDS 211327 211974 . - 0 ID=cds182;Parent=gene182;Dbxref=Genbank:WP_038399850.1;Name=WP_038399850.1;Note=receptor for colicin S4;gbkey=CDS;product=membrane protein;protein_id=WP_038399850.1;transl_table=11 NZ_CP008943.1 RefSeq gene 212071 212286 . - . ID=gene183;Name=DJ40_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00920 NZ_CP008943.1 Protein Homology CDS 212071 212286 . - 0 ID=cds183;Parent=gene183;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NZ_CP008943.1 RefSeq gene 212448 213218 . + . ID=gene184;Name=DJ40_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00925;old_locus_tag=DJ40_181 NZ_CP008943.1 Protein Homology CDS 212448 213218 . + 0 ID=cds184;Parent=gene184;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11 NZ_CP008943.1 RefSeq gene 213339 215078 . - . ID=gene185;Name=DJ40_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00930;old_locus_tag=DJ40_182 NZ_CP008943.1 Protein Homology CDS 213339 215078 . - 0 ID=cds185;Parent=gene185;Dbxref=Genbank:WP_038399852.1;Name=WP_038399852.1;gbkey=CDS;product=sulfate permease;protein_id=WP_038399852.1;transl_table=11 NZ_CP008943.1 RefSeq gene 215309 215851 . + . ID=gene186;Name=DJ40_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00935;old_locus_tag=DJ40_183 NZ_CP008943.1 Protein Homology CDS 215309 215851 . + 0 ID=cds186;Parent=gene186;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11 NZ_CP008943.1 RefSeq gene 215931 216380 . + . ID=gene187;Name=DJ40_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00940;old_locus_tag=DJ40_184 NZ_CP008943.1 Protein Homology CDS 215931 216380 . + 0 ID=cds187;Parent=gene187;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11 NZ_CP008943.1 RefSeq gene 216449 217207 . - . ID=gene188;Name=DJ40_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00945;old_locus_tag=DJ40_185 NZ_CP008943.1 Protein Homology CDS 216449 217207 . - 0 ID=cds188;Parent=gene188;Dbxref=Genbank:WP_038399854.1;Name=WP_038399854.1;gbkey=CDS;product=energy transducer TonB;protein_id=WP_038399854.1;transl_table=11 NZ_CP008943.1 RefSeq gene 217508 217804 . + . ID=gene189;Name=DJ40_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00950;old_locus_tag=DJ40_187 NZ_CP008943.1 Protein Homology CDS 217508 217804 . + 0 ID=cds189;Parent=gene189;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11 NZ_CP008943.1 RefSeq gene 218403 218666 . - . ID=gene190;Name=DJ40_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00955;old_locus_tag=DJ40_189 NZ_CP008943.1 Protein Homology CDS 218403 218666 . - 0 ID=cds190;Parent=gene190;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NZ_CP008943.1 RefSeq gene 218886 219425 . - . ID=gene191;Name=DJ40_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00960;old_locus_tag=DJ40_190 NZ_CP008943.1 Protein Homology CDS 218886 219425 . - 0 ID=cds191;Parent=gene191;Dbxref=Genbank:WP_038399856.1;Name=WP_038399856.1;gbkey=CDS;product=attachment protein;protein_id=WP_038399856.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 220163 220337 . + . ID=id4;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 220472 221932 . + . ID=gene192;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=DJ40_RS00965;old_locus_tag=DJ40_191 NZ_CP008943.1 Protein Homology CDS 220472 221932 . + 0 ID=cds192;Parent=gene192;Dbxref=Genbank:WP_012304089.1;Name=WP_012304089.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_012304089.1;transl_table=11 NZ_CP008943.1 RefSeq gene 222097 222420 . + . ID=gene193;Name=DJ40_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00970;old_locus_tag=DJ40_192 NZ_CP008943.1 Protein Homology CDS 222097 222420 . + 0 ID=cds193;Parent=gene193;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NZ_CP008943.1 RefSeq gene 222719 222933 . - . ID=gene194;Name=DJ40_RS00975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS00975;pseudo=true NZ_CP008943.1 Protein Homology CDS 222719 222933 . - 0 ID=cds194;Parent=gene194;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 223504 224505 . - . ID=gene195;Name=DJ40_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00980;old_locus_tag=DJ40_194 NZ_CP008943.1 Protein Homology CDS 223504 224505 . - 0 ID=cds195;Parent=gene195;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11 NZ_CP008943.1 RefSeq gene 224502 225503 . - . ID=gene196;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=pseudogene;locus_tag=DJ40_RS00985;pseudo=true NZ_CP008943.1 Protein Homology CDS 224502 225503 . - 0 ID=cds196;Parent=gene196;gbkey=CDS;gene=oppD;product=oligopeptide transporter ATP-binding component;pseudo=true;transl_except=(pos:complement(224778..224780)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 225515 226423 . - . ID=gene197;Name=DJ40_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS00990;old_locus_tag=DJ40_197 NZ_CP008943.1 Protein Homology CDS 225515 226423 . - 0 ID=cds197;Parent=gene197;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11 NZ_CP008943.1 RefSeq gene 226439 227359 . - . ID=gene198;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=DJ40_RS00995;old_locus_tag=DJ40_198 NZ_CP008943.1 Protein Homology CDS 226439 227359 . - 0 ID=cds198;Parent=gene198;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11 NZ_CP008943.1 RefSeq gene 227446 229083 . - . ID=gene199;Name=DJ40_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01000;old_locus_tag=DJ40_199 NZ_CP008943.1 Protein Homology CDS 227446 229083 . - 0 ID=cds199;Parent=gene199;Dbxref=Genbank:WP_002218177.1;Name=WP_002218177.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002218177.1;transl_table=11 NZ_CP008943.1 RefSeq gene 229634 230044 . - . ID=gene200;Name=DJ40_RS01005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS01005;old_locus_tag=DJ40_200;partial=true;pseudo=true;start_range=.,229634 NZ_CP008943.1 Protein Homology CDS 229634 230044 . - 0 ID=cds200;Parent=gene200;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,229634;transl_table=11 NZ_CP008943.1 RefSeq gene 230914 233589 . + . ID=gene201;Name=DJ40_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01010;old_locus_tag=DJ40_201 NZ_CP008943.1 Protein Homology CDS 230914 233589 . + 0 ID=cds201;Parent=gene201;Dbxref=Genbank:WP_038399858.1;Name=WP_038399858.1;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_038399858.1;transl_table=11 NZ_CP008943.1 RefSeq gene 234340 234930 . - . ID=gene202;Name=DJ40_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01015;old_locus_tag=DJ40_202 NZ_CP008943.1 Protein Homology CDS 234340 234930 . - 0 ID=cds202;Parent=gene202;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NZ_CP008943.1 RefSeq gene 235680 236087 . + . ID=gene203;Name=DJ40_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01020;old_locus_tag=DJ40_203 NZ_CP008943.1 Protein Homology CDS 235680 236087 . + 0 ID=cds203;Parent=gene203;Dbxref=Genbank:WP_002223593.1;Name=WP_002223593.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002223593.1;transl_table=11 NZ_CP008943.1 RefSeq gene 236522 237867 . - . ID=gene204;Name=DJ40_RS01025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS01025;pseudo=true NZ_CP008943.1 Protein Homology CDS 236522 237867 . - 0 ID=cds204;Parent=gene204;exception=annotated by transcript or proteomic data;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 238174 239190 . - . ID=gene205;Name=DJ40_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01030;old_locus_tag=DJ40_206 NZ_CP008943.1 Protein Homology CDS 238174 239190 . - 0 ID=cds205;Parent=gene205;Dbxref=Genbank:WP_002210665.1;Name=WP_002210665.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210665.1;transl_table=11 NZ_CP008943.1 RefSeq gene 240524 240988 . + . ID=gene206;Name=DJ40_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01035;old_locus_tag=DJ40_207 NZ_CP008943.1 Protein Homology CDS 240524 240988 . + 0 ID=cds206;Parent=gene206;Dbxref=Genbank:WP_038399860.1;Name=WP_038399860.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399860.1;transl_table=11 NZ_CP008943.1 RefSeq gene 241072 241920 . + . ID=gene207;Name=DJ40_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01040;old_locus_tag=DJ40_208 NZ_CP008943.1 Protein Homology CDS 241072 241920 . + 0 ID=cds207;Parent=gene207;Dbxref=Genbank:WP_002230891.1;Name=WP_002230891.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_002230891.1;transl_table=11 NZ_CP008943.1 RefSeq gene 242069 242153 . + . ID=gene208;Name=DJ40_RS01045;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS01045;old_locus_tag=DJ40_209 NZ_CP008943.1 tRNAscan-SE tRNA 242069 242153 . + . ID=rna0;Parent=gene208;anticodon=(pos:242103..242105);gbkey=tRNA;product=tRNA-Tyr NZ_CP008943.1 tRNAscan-SE exon 242069 242153 . + . ID=id5;Parent=rna0;anticodon=(pos:242103..242105);gbkey=tRNA;product=tRNA-Tyr NZ_CP008943.1 RefSeq repeat_region 242135 242253 . + . ID=id6;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 242307 242425 . + . ID=id7;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 242487 243347 . - . ID=gene209;Name=DJ40_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01050;old_locus_tag=DJ40_210 NZ_CP008943.1 Protein Homology CDS 242487 243347 . - 0 ID=cds208;Parent=gene209;Dbxref=Genbank:WP_012304093.1;Name=WP_012304093.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012304093.1;transl_table=11 NZ_CP008943.1 RefSeq gene 244157 244963 . + . ID=gene210;Name=DJ40_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01055;old_locus_tag=DJ40_211 NZ_CP008943.1 Protein Homology CDS 244157 244963 . + 0 ID=cds209;Parent=gene210;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11 NZ_CP008943.1 RefSeq gene 245061 245447 . + . ID=gene211;Name=DJ40_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01060;old_locus_tag=DJ40_212 NZ_CP008943.1 Protein Homology CDS 245061 245447 . + 0 ID=cds210;Parent=gene211;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11 NZ_CP008943.1 RefSeq gene 245460 245750 . - . ID=gene212;Name=DJ40_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01065;old_locus_tag=DJ40_213 NZ_CP008943.1 Protein Homology CDS 245460 245750 . - 0 ID=cds211;Parent=gene212;Dbxref=Genbank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211669.1;transl_table=11 NZ_CP008943.1 RefSeq gene 245747 247672 . - . ID=gene213;Name=DJ40_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01070;old_locus_tag=DJ40_214 NZ_CP008943.1 Protein Homology CDS 245747 247672 . - 0 ID=cds212;Parent=gene213;Dbxref=Genbank:WP_012105118.1;Name=WP_012105118.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_012105118.1;transl_table=11 NZ_CP008943.1 RefSeq gene 247719 248765 . - . ID=gene214;Name=DJ40_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01075;old_locus_tag=DJ40_215 NZ_CP008943.1 Protein Homology CDS 247719 248765 . - 0 ID=cds213;Parent=gene214;Dbxref=Genbank:WP_011192432.1;Name=WP_011192432.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_011192432.1;transl_table=11 NZ_CP008943.1 RefSeq gene 248990 249541 . - . ID=gene215;Name=DJ40_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01080;old_locus_tag=DJ40_216 NZ_CP008943.1 Protein Homology CDS 248990 249541 . - 0 ID=cds214;Parent=gene215;Dbxref=Genbank:WP_038399863.1;Name=WP_038399863.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_038399863.1;transl_table=11 NZ_CP008943.1 RefSeq gene 249704 251554 . + . ID=gene216;Name=DJ40_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01085;old_locus_tag=DJ40_217 NZ_CP008943.1 Protein Homology CDS 249704 251554 . + 0 ID=cds215;Parent=gene216;Dbxref=Genbank:WP_011192431.1;Name=WP_011192431.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_011192431.1;transl_table=11 NZ_CP008943.1 RefSeq gene 251671 252687 . + . ID=gene217;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=DJ40_RS01090;old_locus_tag=DJ40_218 NZ_CP008943.1 Protein Homology CDS 251671 252687 . + 0 ID=cds216;Parent=gene217;Dbxref=Genbank:WP_002211675.1;Name=WP_002211675.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_002211675.1;transl_table=11 NZ_CP008943.1 RefSeq gene 252702 253349 . + . ID=gene218;Name=DJ40_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01095;old_locus_tag=DJ40_219 NZ_CP008943.1 Protein Homology CDS 252702 253349 . + 0 ID=cds217;Parent=gene218;Dbxref=Genbank:WP_038399865.1;Name=WP_038399865.1;gbkey=CDS;product=pyrazinamidase/nicotinamidase;protein_id=WP_038399865.1;transl_table=11 NZ_CP008943.1 RefSeq gene 253483 253755 . - . ID=gene219;Name=DJ40_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01100;old_locus_tag=DJ40_220 NZ_CP008943.1 Protein Homology CDS 253483 253755 . - 0 ID=cds218;Parent=gene219;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11 NZ_CP008943.1 RefSeq gene 253826 254239 . - . ID=gene220;Name=DJ40_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01105;old_locus_tag=DJ40_221 NZ_CP008943.1 Protein Homology CDS 253826 254239 . - 0 ID=cds219;Parent=gene220;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NZ_CP008943.1 RefSeq gene 254587 255582 . + . ID=gene221;Name=DJ40_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01110;old_locus_tag=DJ40_222 NZ_CP008943.1 Protein Homology CDS 254587 255582 . + 0 ID=cds220;Parent=gene221;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NZ_CP008943.1 RefSeq gene 255906 256781 . + . ID=gene222;Name=DJ40_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01115;old_locus_tag=DJ40_223 NZ_CP008943.1 Protein Homology CDS 255906 256781 . + 0 ID=cds221;Parent=gene222;Dbxref=Genbank:WP_002211679.1;Name=WP_002211679.1;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;protein_id=WP_002211679.1;transl_table=11 NZ_CP008943.1 RefSeq gene 256854 257624 . - . ID=gene223;Name=DJ40_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01120;old_locus_tag=DJ40_224 NZ_CP008943.1 Protein Homology CDS 256854 257624 . - 0 ID=cds222;Parent=gene223;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11 NZ_CP008943.1 RefSeq gene 258047 259981 . + . ID=gene224;Name=DJ40_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01125;old_locus_tag=DJ40_225 NZ_CP008943.1 Protein Homology CDS 258047 259981 . + 0 ID=cds223;Parent=gene224;Dbxref=Genbank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_002211681.1;transl_table=11 NZ_CP008943.1 RefSeq gene 260131 261405 . + . ID=gene225;Name=DJ40_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01130;old_locus_tag=DJ40_226 NZ_CP008943.1 Protein Homology CDS 260131 261405 . + 0 ID=cds224;Parent=gene225;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11 NZ_CP008943.1 RefSeq gene 261513 262616 . + . ID=gene226;Name=DJ40_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01135;old_locus_tag=DJ40_227 NZ_CP008943.1 Protein Homology CDS 261513 262616 . + 0 ID=cds225;Parent=gene226;Dbxref=Genbank:WP_038399866.1;Name=WP_038399866.1;gbkey=CDS;product=membrane protein;protein_id=WP_038399866.1;transl_table=11 NZ_CP008943.1 RefSeq gene 262651 263556 . - . ID=gene227;Name=DJ40_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01140;old_locus_tag=DJ40_228 NZ_CP008943.1 Protein Homology CDS 262651 263556 . - 0 ID=cds226;Parent=gene227;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NZ_CP008943.1 RefSeq gene 263754 264623 . + . ID=gene228;Name=DJ40_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01145;old_locus_tag=DJ40_229 NZ_CP008943.1 Protein Homology CDS 263754 264623 . + 0 ID=cds227;Parent=gene228;Dbxref=Genbank:WP_002211685.1;Name=WP_002211685.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002211685.1;transl_table=11 NZ_CP008943.1 RefSeq gene 264888 266081 . + . ID=gene229;Name=DJ40_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01150;old_locus_tag=DJ40_230 NZ_CP008943.1 Protein Homology CDS 264888 266081 . + 0 ID=cds228;Parent=gene229;Dbxref=Genbank:WP_011192426.1;Name=WP_011192426.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_011192426.1;transl_table=11 NZ_CP008943.1 RefSeq gene 266110 267414 . - . ID=gene230;Name=DJ40_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01155;old_locus_tag=DJ40_231 NZ_CP008943.1 Protein Homology CDS 266110 267414 . - 0 ID=cds229;Parent=gene230;Dbxref=Genbank:WP_038399867.1;Name=WP_038399867.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=amino acid dehydrogenase;protein_id=WP_038399867.1;transl_table=11 NZ_CP008943.1 RefSeq gene 267880 269415 . + . ID=gene231;Name=DJ40_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01160;old_locus_tag=DJ40_232 NZ_CP008943.1 Protein Homology CDS 267880 269415 . + 0 ID=cds230;Parent=gene231;Dbxref=Genbank:WP_011192425.1;Name=WP_011192425.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_011192425.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 269467 269593 . + . ID=id8;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 269633 270352 . - . ID=gene232;Name=DJ40_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01165;old_locus_tag=DJ40_233 NZ_CP008943.1 Protein Homology CDS 269633 270352 . - 0 ID=cds231;Parent=gene232;Dbxref=Genbank:WP_038399869.1;Name=WP_038399869.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_038399869.1;transl_table=11 NZ_CP008943.1 RefSeq gene 270596 272170 . + . ID=gene233;Name=DJ40_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01170;old_locus_tag=DJ40_234 NZ_CP008943.1 Protein Homology CDS 270596 272170 . + 0 ID=cds232;Parent=gene233;Dbxref=Genbank:WP_011192424.1;Name=WP_011192424.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_011192424.1;transl_table=11 NZ_CP008943.1 RefSeq gene 272406 272936 . + . ID=gene234;Name=DJ40_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01175;old_locus_tag=DJ40_235 NZ_CP008943.1 Protein Homology CDS 272406 272936 . + 0 ID=cds233;Parent=gene234;Dbxref=Genbank:WP_038399871.1;Name=WP_038399871.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_038399871.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 272980 273697 . + . ID=id9;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 273132 273590 . + . ID=gene235;Name=DJ40_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01180;old_locus_tag=DJ40_236 NZ_CP008943.1 Protein Homology CDS 273132 273590 . + 0 ID=cds234;Parent=gene235;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 274063 274419 . - . ID=gene236;Name=DJ40_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01185;old_locus_tag=DJ40_237 NZ_CP008943.1 Protein Homology CDS 274063 274419 . - 0 ID=cds235;Parent=gene236;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NZ_CP008943.1 RefSeq gene 275511 276251 . + . ID=gene237;Name=DJ40_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01190;old_locus_tag=DJ40_238 NZ_CP008943.1 Protein Homology CDS 275511 276251 . + 0 ID=cds236;Parent=gene237;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NZ_CP008943.1 RefSeq gene 276268 277467 . + . ID=gene238;Name=DJ40_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01195;old_locus_tag=DJ40_239 NZ_CP008943.1 Protein Homology CDS 276268 277467 . + 0 ID=cds237;Parent=gene238;Dbxref=Genbank:WP_038399875.1;Name=WP_038399875.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_038399875.1;transl_table=11 NZ_CP008943.1 RefSeq gene 277471 278643 . + . ID=gene239;Name=DJ40_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01200;old_locus_tag=DJ40_240 NZ_CP008943.1 Protein Homology CDS 277471 278643 . + 0 ID=cds238;Parent=gene239;Dbxref=Genbank:WP_002214492.1;Name=WP_002214492.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NZ_CP008943.1 RefSeq gene 278744 279190 . - . ID=gene240;Name=DJ40_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01205;old_locus_tag=DJ40_241 NZ_CP008943.1 Protein Homology CDS 278744 279190 . - 0 ID=cds239;Parent=gene240;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11 NZ_CP008943.1 RefSeq gene 279293 279949 . - . ID=gene241;Name=DJ40_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01210;old_locus_tag=DJ40_242 NZ_CP008943.1 Protein Homology CDS 279293 279949 . - 0 ID=cds240;Parent=gene241;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11 NZ_CP008943.1 RefSeq gene 280020 281105 . - . ID=gene242;Name=DJ40_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01215;old_locus_tag=DJ40_243 NZ_CP008943.1 Protein Homology CDS 280020 281105 . - 0 ID=cds241;Parent=gene242;Dbxref=Genbank:WP_012304103.1;Name=WP_012304103.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304103.1;transl_table=11 NZ_CP008943.1 RefSeq gene 281246 281518 . - . ID=gene243;Name=DJ40_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01220;old_locus_tag=DJ40_244 NZ_CP008943.1 Protein Homology CDS 281246 281518 . - 0 ID=cds242;Parent=gene243;Dbxref=Genbank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211743.1;transl_table=11 NZ_CP008943.1 RefSeq gene 282223 282908 . + . ID=gene244;Name=minC;gbkey=Gene;gene=minC;gene_biotype=pseudogene;locus_tag=DJ40_RS01225;pseudo=true NZ_CP008943.1 Protein Homology CDS 282223 282908 . + 0 ID=cds243;Parent=gene244;Note=blocks the formation of polar Z-ring septums;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=minC;product=septum formation inhibitor;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 282933 283745 . + . ID=gene245;Name=DJ40_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01230;old_locus_tag=DJ40_247 NZ_CP008943.1 Protein Homology CDS 282933 283745 . + 0 ID=cds244;Parent=gene245;Dbxref=Genbank:WP_038399878.1;Name=WP_038399878.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_038399878.1;transl_table=11 NZ_CP008943.1 RefSeq gene 283749 284018 . + . ID=gene246;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=DJ40_RS01235;old_locus_tag=DJ40_248 NZ_CP008943.1 Protein Homology CDS 283749 284018 . + 0 ID=cds245;Parent=gene246;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11 NZ_CP008943.1 RefSeq gene 284255 285376 . - . ID=gene247;Name=DJ40_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01240;old_locus_tag=DJ40_249 NZ_CP008943.1 Protein Homology CDS 284255 285376 . - 0 ID=cds246;Parent=gene247;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NZ_CP008943.1 RefSeq gene 285536 287224 . - . ID=gene248;Name=DJ40_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01245;old_locus_tag=DJ40_250 NZ_CP008943.1 Protein Homology CDS 285536 287224 . - 0 ID=cds247;Parent=gene248;Dbxref=Genbank:WP_002220632.1;Name=WP_002220632.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002220632.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 287715 287831 . + . ID=id10;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 287867 288472 . - . ID=gene249;Name=DJ40_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01250;old_locus_tag=DJ40_251 NZ_CP008943.1 Protein Homology CDS 287867 288472 . - 0 ID=cds248;Parent=gene249;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11 NZ_CP008943.1 RefSeq gene 288609 289307 . - . ID=gene250;Name=DJ40_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01255;old_locus_tag=DJ40_252 NZ_CP008943.1 Protein Homology CDS 288609 289307 . - 0 ID=cds249;Parent=gene250;Dbxref=Genbank:WP_002211184.1;Name=WP_002211184.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_002211184.1;transl_table=11 NZ_CP008943.1 RefSeq gene 289379 291283 . - . ID=gene251;Name=DJ40_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01260;old_locus_tag=DJ40_253 NZ_CP008943.1 Protein Homology CDS 289379 291283 . - 0 ID=cds250;Parent=gene251;Dbxref=Genbank:WP_011192419.1;Name=WP_011192419.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_011192419.1;transl_table=11 NZ_CP008943.1 RefSeq gene 291414 291758 . + . ID=gene252;Name=DJ40_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01265;old_locus_tag=DJ40_254 NZ_CP008943.1 Protein Homology CDS 291414 291758 . + 0 ID=cds251;Parent=gene252;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 291890 292219 . - . ID=gene253;Name=DJ40_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01270;old_locus_tag=DJ40_255 NZ_CP008943.1 Protein Homology CDS 291890 292219 . - 0 ID=cds252;Parent=gene253;Dbxref=Genbank:WP_002211187.1;Name=WP_002211187.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_002211187.1;transl_table=11 NZ_CP008943.1 RefSeq gene 292206 292649 . - . ID=gene254;Name=DJ40_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01275;old_locus_tag=DJ40_256 NZ_CP008943.1 Protein Homology CDS 292206 292649 . - 0 ID=cds253;Parent=gene254;Dbxref=Genbank:WP_012105125.1;Name=WP_012105125.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_012105125.1;transl_table=11 NZ_CP008943.1 RefSeq gene 293364 294005 . - . ID=gene255;Name=DJ40_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01280;old_locus_tag=DJ40_257 NZ_CP008943.1 Protein Homology CDS 293364 294005 . - 0 ID=cds254;Parent=gene255;Dbxref=Genbank:WP_002211190.1;Name=WP_002211190.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_002211190.1;transl_table=11 NZ_CP008943.1 RefSeq gene 294012 294203 . - . ID=gene256;Name=DJ40_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01285;old_locus_tag=DJ40_258 NZ_CP008943.1 Protein Homology CDS 294012 294203 . - 0 ID=cds255;Parent=gene256;Dbxref=Genbank:WP_002216963.1;Name=WP_002216963.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 294247 295731 . - . ID=gene257;Name=DJ40_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01290;old_locus_tag=DJ40_259 NZ_CP008943.1 Protein Homology CDS 294247 295731 . - 0 ID=cds256;Parent=gene257;Dbxref=Genbank:WP_011906215.1;Name=WP_011906215.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_011906215.1;transl_table=11 NZ_CP008943.1 RefSeq gene 296084 296953 . + . ID=gene258;Name=DJ40_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01295;old_locus_tag=DJ40_260 NZ_CP008943.1 Protein Homology CDS 296084 296953 . + 0 ID=cds257;Parent=gene258;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NZ_CP008943.1 RefSeq gene 297283 298725 . + . ID=gene259;Name=DJ40_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01300;old_locus_tag=DJ40_261 NZ_CP008943.1 Protein Homology CDS 297283 298725 . + 0 ID=cds258;Parent=gene259;Dbxref=Genbank:WP_002211193.1;Name=WP_002211193.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 298774 298946 . + . ID=id11;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 299065 300027 . - . ID=gene260;Name=DJ40_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01305;old_locus_tag=DJ40_262 NZ_CP008943.1 Protein Homology CDS 299065 300027 . - 0 ID=cds259;Parent=gene260;Dbxref=Genbank:WP_002211194.1;Name=WP_002211194.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_002211194.1;transl_table=11 NZ_CP008943.1 RefSeq gene 300294 301610 . - . ID=gene261;Name=DJ40_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01310;old_locus_tag=DJ40_263 NZ_CP008943.1 Protein Homology CDS 300294 301610 . - 0 ID=cds260;Parent=gene261;Dbxref=Genbank:WP_002228437.1;Name=WP_002228437.1;gbkey=CDS;product=peptidase;protein_id=WP_002228437.1;transl_table=11 NZ_CP008943.1 RefSeq gene 301631 302587 . - . ID=gene262;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=DJ40_RS01315;old_locus_tag=DJ40_264 NZ_CP008943.1 Protein Homology CDS 301631 302587 . - 0 ID=cds261;Parent=gene262;Dbxref=Genbank:WP_002227944.1;Name=WP_002227944.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_002227944.1;transl_table=11 NZ_CP008943.1 RefSeq gene 302663 303421 . + . ID=gene263;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=DJ40_RS01320;old_locus_tag=DJ40_265 NZ_CP008943.1 Protein Homology CDS 302663 303421 . + 0 ID=cds262;Parent=gene263;Dbxref=Genbank:WP_002228434.1;Name=WP_002228434.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_002228434.1;transl_table=11 NZ_CP008943.1 RefSeq gene 303418 304203 . + . ID=gene264;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=DJ40_RS01325;old_locus_tag=DJ40_266 NZ_CP008943.1 Protein Homology CDS 303418 304203 . + 0 ID=cds263;Parent=gene264;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11 NZ_CP008943.1 RefSeq gene 304258 305262 . - . ID=gene265;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=DJ40_RS01330;old_locus_tag=DJ40_267 NZ_CP008943.1 Protein Homology CDS 304258 305262 . - 0 ID=cds264;Parent=gene265;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NZ_CP008943.1 RefSeq gene 305424 306038 . - . ID=gene266;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=DJ40_RS01335;old_locus_tag=DJ40_268 NZ_CP008943.1 Protein Homology CDS 305424 306038 . - 0 ID=cds265;Parent=gene266;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11 NZ_CP008943.1 RefSeq gene 306345 306866 . - . ID=gene267;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=DJ40_RS01340;old_locus_tag=DJ40_269 NZ_CP008943.1 Protein Homology CDS 306345 306866 . - 0 ID=cds266;Parent=gene267;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 307075 307818 . - . ID=gene268;Name=DJ40_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01345;old_locus_tag=DJ40_270 NZ_CP008943.1 Protein Homology CDS 307075 307818 . - 0 ID=cds267;Parent=gene268;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NZ_CP008943.1 RefSeq gene 307876 308319 . - . ID=gene269;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=DJ40_RS01350;old_locus_tag=DJ40_271 NZ_CP008943.1 Protein Homology CDS 307876 308319 . - 0 ID=cds268;Parent=gene269;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11 NZ_CP008943.1 RefSeq gene 308319 310115 . - . ID=gene270;Name=DJ40_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01355;old_locus_tag=DJ40_272 NZ_CP008943.1 Protein Homology CDS 308319 310115 . - 0 ID=cds269;Parent=gene270;Dbxref=Genbank:WP_002211204.1;Name=WP_002211204.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NZ_CP008943.1 RefSeq gene 310802 311617 . + . ID=gene271;Name=DJ40_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01360;old_locus_tag=DJ40_273 NZ_CP008943.1 Protein Homology CDS 310802 311617 . + 0 ID=cds270;Parent=gene271;Dbxref=Genbank:WP_012105129.1;Name=WP_012105129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105129.1;transl_table=11 NZ_CP008943.1 RefSeq gene 311797 312192 . + . ID=gene272;Name=DJ40_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01365;old_locus_tag=DJ40_274 NZ_CP008943.1 Protein Homology CDS 311797 312192 . + 0 ID=cds271;Parent=gene272;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11 NZ_CP008943.1 RefSeq gene 312382 313185 . + . ID=gene273;Name=DJ40_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01370;old_locus_tag=DJ40_275 NZ_CP008943.1 Protein Homology CDS 312382 313185 . + 0 ID=cds272;Parent=gene273;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11 NZ_CP008943.1 RefSeq gene 313182 314153 . + . ID=gene274;Name=DJ40_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01375;old_locus_tag=DJ40_276 NZ_CP008943.1 Protein Homology CDS 313182 314153 . + 0 ID=cds273;Parent=gene274;Dbxref=Genbank:WP_012304109.1;Name=WP_012304109.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_012304109.1;transl_table=11 NZ_CP008943.1 RefSeq gene 314346 315110 . - . ID=gene275;Name=DJ40_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01380;old_locus_tag=DJ40_277 NZ_CP008943.1 Protein Homology CDS 314346 315110 . - 0 ID=cds274;Parent=gene275;Dbxref=Genbank:WP_011192410.1;Name=WP_011192410.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_011192410.1;transl_table=11 NZ_CP008943.1 RefSeq gene 315342 315917 . - . ID=gene276;Name=DJ40_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01385;old_locus_tag=DJ40_278 NZ_CP008943.1 Protein Homology CDS 315342 315917 . - 0 ID=cds275;Parent=gene276;Dbxref=Genbank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211210.1;transl_table=11 NZ_CP008943.1 RefSeq gene 316455 318185 . + . ID=gene277;Name=DJ40_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01390;old_locus_tag=DJ40_279 NZ_CP008943.1 Protein Homology CDS 316455 318185 . + 0 ID=cds276;Parent=gene277;Dbxref=Genbank:WP_011192408.1;Name=WP_011192408.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_011192408.1;transl_table=11 NZ_CP008943.1 RefSeq gene 318252 323167 . - . ID=gene278;Name=DJ40_RS01395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS01395;pseudo=true NZ_CP008943.1 Protein Homology CDS 318252 323167 . - 0 ID=cds277;Parent=gene278;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemolysin;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 323197 324858 . - . ID=gene279;Name=DJ40_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01400;old_locus_tag=DJ40_282 NZ_CP008943.1 Protein Homology CDS 323197 324858 . - 0 ID=cds278;Parent=gene279;Dbxref=Genbank:WP_038399882.1;Name=WP_038399882.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_038399882.1;transl_table=11 NZ_CP008943.1 RefSeq gene 325290 326825 . - . ID=gene280;Name=DJ40_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01405;old_locus_tag=DJ40_283 NZ_CP008943.1 Protein Homology CDS 325290 326825 . - 0 ID=cds279;Parent=gene280;Dbxref=Genbank:WP_011192405.1;Name=WP_011192405.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192405.1;transl_table=11 NZ_CP008943.1 RefSeq gene 327046 327975 . - . ID=gene281;Name=DJ40_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01410 NZ_CP008943.1 Protein Homology CDS 327046 327975 . - 0 ID=cds280;Parent=gene281;Dbxref=Genbank:WP_038399884.1;Name=WP_038399884.1;gbkey=CDS;product=virulence factor MviM;protein_id=WP_038399884.1;transl_table=11 NZ_CP008943.1 RefSeq gene 327968 328669 . - . ID=gene282;Name=DJ40_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01415 NZ_CP008943.1 Protein Homology CDS 327968 328669 . - 0 ID=cds281;Parent=gene282;Dbxref=Genbank:WP_011192403.1;Name=WP_011192403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192403.1;transl_table=11 NZ_CP008943.1 RefSeq gene 328677 329261 . - . ID=gene283;Name=DJ40_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01420;old_locus_tag=DJ40_286 NZ_CP008943.1 Protein Homology CDS 328677 329261 . - 0 ID=cds282;Parent=gene283;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NZ_CP008943.1 RefSeq gene 329555 330759 . + . ID=gene284;Name=DJ40_RS01425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS01425;old_locus_tag=DJ40_287;pseudo=true NZ_CP008943.1 Protein Homology CDS 329555 330759 . + 0 ID=cds283;Parent=gene284;Note=Confers resistance to norfloxacin and enoxacin;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug resistance protein MdtH;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 331161 331724 . + . ID=gene285;Name=DJ40_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01430;old_locus_tag=DJ40_288 NZ_CP008943.1 Protein Homology CDS 331161 331724 . + 0 ID=cds284;Parent=gene285;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 331798 332124 . + . ID=id12;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 332178 332738 . - . ID=gene286;Name=DJ40_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01435;old_locus_tag=DJ40_289 NZ_CP008943.1 Protein Homology CDS 332178 332738 . - 0 ID=cds285;Parent=gene286;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NZ_CP008943.1 RefSeq gene 332775 333512 . - . ID=gene287;Name=DJ40_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01440;old_locus_tag=DJ40_290 NZ_CP008943.1 Protein Homology CDS 332775 333512 . - 0 ID=cds286;Parent=gene287;Dbxref=Genbank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NZ_CP008943.1 RefSeq gene 333801 333890 . + . ID=gene288;Name=DJ40_RS01445;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS01445;old_locus_tag=DJ40_291 NZ_CP008943.1 tRNAscan-SE tRNA 333801 333890 . + . ID=rna1;Parent=gene288;anticodon=(pos:333835..333837);gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 tRNAscan-SE exon 333801 333890 . + . ID=id13;Parent=rna1;anticodon=(pos:333835..333837);gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 RefSeq gene 334147 335259 . - . ID=gene289;Name=DJ40_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01450;old_locus_tag=DJ40_292 NZ_CP008943.1 Protein Homology CDS 334147 335259 . - 0 ID=cds287;Parent=gene289;Dbxref=Genbank:WP_002211222.1;Name=WP_002211222.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NZ_CP008943.1 RefSeq gene 335273 336103 . - . ID=gene290;Name=DJ40_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01455;old_locus_tag=DJ40_293 NZ_CP008943.1 Protein Homology CDS 335273 336103 . - 0 ID=cds288;Parent=gene290;Dbxref=Genbank:WP_038399886.1;Name=WP_038399886.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_038399886.1;transl_table=11 NZ_CP008943.1 RefSeq gene 336317 337384 . + . ID=gene291;Name=DJ40_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01460;old_locus_tag=DJ40_294 NZ_CP008943.1 Protein Homology CDS 336317 337384 . + 0 ID=cds289;Parent=gene291;Dbxref=Genbank:WP_015683639.1;Name=WP_015683639.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_015683639.1;transl_table=11 NZ_CP008943.1 RefSeq gene 337381 338247 . + . ID=gene292;Name=DJ40_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01465;old_locus_tag=DJ40_295 NZ_CP008943.1 Protein Homology CDS 337381 338247 . + 0 ID=cds290;Parent=gene292;Dbxref=Genbank:WP_012304116.1;Name=WP_012304116.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_012304116.1;transl_table=11 NZ_CP008943.1 RefSeq gene 338244 339080 . + . ID=gene293;Name=DJ40_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01470;old_locus_tag=DJ40_296 NZ_CP008943.1 Protein Homology CDS 338244 339080 . + 0 ID=cds291;Parent=gene293;Dbxref=Genbank:WP_002211227.1;Name=WP_002211227.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NZ_CP008943.1 RefSeq gene 339100 340183 . + . ID=gene294;Name=DJ40_RS01475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS01475;pseudo=true NZ_CP008943.1 Protein Homology CDS 339100 340183 . + 0 ID=cds292;Parent=gene294;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 340484 341359 . + . ID=gene295;Name=DJ40_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01480;old_locus_tag=DJ40_299 NZ_CP008943.1 Protein Homology CDS 340484 341359 . + 0 ID=cds293;Parent=gene295;Dbxref=Genbank:WP_038399887.1;Name=WP_038399887.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_038399887.1;transl_table=11 NZ_CP008943.1 RefSeq gene 341501 341590 . + . ID=gene296;Name=DJ40_RS01485;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS01485;old_locus_tag=DJ40_300 NZ_CP008943.1 tRNAscan-SE tRNA 341501 341590 . + . ID=rna2;Parent=gene296;anticodon=(pos:341535..341537);gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 tRNAscan-SE exon 341501 341590 . + . ID=id14;Parent=rna2;anticodon=(pos:341535..341537);gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 RefSeq gene 341910 342206 . + . ID=gene297;Name=DJ40_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01490 NZ_CP008943.1 Protein Homology CDS 341910 342206 . + 0 ID=cds294;Parent=gene297;Dbxref=Genbank:WP_038399889.1;Name=WP_038399889.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399889.1;transl_table=11 NZ_CP008943.1 RefSeq gene 342445 344142 . + . ID=gene298;Name=DJ40_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01495;old_locus_tag=DJ40_301 NZ_CP008943.1 Protein Homology CDS 342445 344142 . + 0 ID=cds295;Parent=gene298;Dbxref=Genbank:WP_002224472.1;Name=WP_002224472.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_002224472.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 344183 344356 . + . ID=id15;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 344692 345546 . - . ID=gene299;Name=DJ40_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01500;old_locus_tag=DJ40_302 NZ_CP008943.1 Protein Homology CDS 344692 345546 . - 0 ID=cds296;Parent=gene299;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11 NZ_CP008943.1 RefSeq gene 345642 346451 . - . ID=gene300;Name=DJ40_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01505;old_locus_tag=DJ40_303 NZ_CP008943.1 Protein Homology CDS 345642 346451 . - 0 ID=cds297;Parent=gene300;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11 NZ_CP008943.1 RefSeq gene 346448 346849 . - . ID=gene301;Name=DJ40_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01510;old_locus_tag=DJ40_304 NZ_CP008943.1 Protein Homology CDS 346448 346849 . - 0 ID=cds298;Parent=gene301;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11 NZ_CP008943.1 RefSeq gene 346913 347743 . - . ID=gene302;Name=DJ40_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01515;old_locus_tag=DJ40_305 NZ_CP008943.1 Protein Homology CDS 346913 347743 . - 0 ID=cds299;Parent=gene302;Dbxref=Genbank:WP_011192399.1;Name=WP_011192399.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_011192399.1;transl_table=11 NZ_CP008943.1 RefSeq gene 347743 348825 . - . ID=gene303;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=DJ40_RS01520;old_locus_tag=DJ40_306 NZ_CP008943.1 Protein Homology CDS 347743 348825 . - 0 ID=cds300;Parent=gene303;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NZ_CP008943.1 RefSeq gene 348858 350120 . - . ID=gene304;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=DJ40_RS01525;old_locus_tag=DJ40_307 NZ_CP008943.1 Protein Homology CDS 348858 350120 . - 0 ID=cds301;Parent=gene304;Dbxref=Genbank:WP_002211237.1;Name=WP_002211237.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NZ_CP008943.1 RefSeq gene 350426 351049 . + . ID=gene305;Name=DJ40_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01530;old_locus_tag=DJ40_308 NZ_CP008943.1 Protein Homology CDS 350426 351049 . + 0 ID=cds302;Parent=gene305;Dbxref=Genbank:WP_038399890.1;Name=WP_038399890.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_038399890.1;transl_table=11 NZ_CP008943.1 RefSeq gene 351051 351950 . + . ID=gene306;Name=DJ40_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01535;old_locus_tag=DJ40_309 NZ_CP008943.1 Protein Homology CDS 351051 351950 . + 0 ID=cds303;Parent=gene306;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NZ_CP008943.1 RefSeq gene 352131 352241 . + . ID=gene307;Name=DJ40_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01540 NZ_CP008943.1 Protein Homology CDS 352131 352241 . + 0 ID=cds304;Parent=gene307;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11 NZ_CP008943.1 RefSeq gene 352291 353238 . + . ID=gene308;Name=DJ40_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01545;old_locus_tag=DJ40_310 NZ_CP008943.1 Protein Homology CDS 352291 353238 . + 0 ID=cds305;Parent=gene308;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11 NZ_CP008943.1 RefSeq gene 353336 353449 . + . ID=gene309;Name=DJ40_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01550 NZ_CP008943.1 Protein Homology CDS 353336 353449 . + 0 ID=cds306;Parent=gene309;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11 NZ_CP008943.1 RefSeq gene 353440 353712 . - . ID=gene310;Name=DJ40_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01555;old_locus_tag=DJ40_311 NZ_CP008943.1 Protein Homology CDS 353440 353712 . - 0 ID=cds307;Parent=gene310;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11 NZ_CP008943.1 RefSeq gene 354074 354664 . + . ID=gene311;Name=DJ40_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01560;old_locus_tag=DJ40_312 NZ_CP008943.1 Protein Homology CDS 354074 354664 . + 0 ID=cds308;Parent=gene311;Dbxref=Genbank:WP_012105144.1;Name=WP_012105144.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_012105144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 354829 355920 . + . ID=gene312;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=DJ40_RS01565;old_locus_tag=DJ40_313 NZ_CP008943.1 Protein Homology CDS 354829 355920 . + 0 ID=cds309;Parent=gene312;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11 NZ_CP008943.1 RefSeq gene 356027 356869 . + . ID=gene313;Name=DJ40_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01570;old_locus_tag=DJ40_314 NZ_CP008943.1 Protein Homology CDS 356027 356869 . + 0 ID=cds310;Parent=gene313;Dbxref=Genbank:WP_038399892.1;Name=WP_038399892.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399892.1;transl_table=11 NZ_CP008943.1 RefSeq gene 357076 357771 . - . ID=gene314;Name=DJ40_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01575;old_locus_tag=DJ40_315 NZ_CP008943.1 Protein Homology CDS 357076 357771 . - 0 ID=cds311;Parent=gene314;Dbxref=Genbank:WP_011192395.1;Name=WP_011192395.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192395.1;transl_table=11 NZ_CP008943.1 RefSeq gene 357786 358451 . - . ID=gene315;Name=DJ40_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01580;old_locus_tag=DJ40_316 NZ_CP008943.1 Protein Homology CDS 357786 358451 . - 0 ID=cds312;Parent=gene315;Dbxref=Genbank:WP_002211251.1;Name=WP_002211251.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11 NZ_CP008943.1 RefSeq gene 358642 359733 . - . ID=gene316;Name=DJ40_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01585;old_locus_tag=DJ40_317 NZ_CP008943.1 Protein Homology CDS 358642 359733 . - 0 ID=cds313;Parent=gene316;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11 NZ_CP008943.1 RefSeq gene 359998 360690 . + . ID=gene317;Name=DJ40_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01590;old_locus_tag=DJ40_318 NZ_CP008943.1 Protein Homology CDS 359998 360690 . + 0 ID=cds314;Parent=gene317;Dbxref=Genbank:WP_002211253.1;Name=WP_002211253.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211253.1;transl_table=11 NZ_CP008943.1 RefSeq gene 360702 362087 . + . ID=gene318;Name=DJ40_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01595;old_locus_tag=DJ40_319 NZ_CP008943.1 Protein Homology CDS 360702 362087 . + 0 ID=cds315;Parent=gene318;Dbxref=Genbank:WP_002211254.1;Name=WP_002211254.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11 NZ_CP008943.1 RefSeq gene 362364 362786 . + . ID=gene319;Name=DJ40_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01600;old_locus_tag=DJ40_320 NZ_CP008943.1 Protein Homology CDS 362364 362786 . + 0 ID=cds316;Parent=gene319;Dbxref=Genbank:WP_002211255.1;Name=WP_002211255.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002211255.1;transl_table=11 NZ_CP008943.1 RefSeq gene 362841 363311 . + . ID=gene320;Name=DJ40_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01605;old_locus_tag=DJ40_321 NZ_CP008943.1 Protein Homology CDS 362841 363311 . + 0 ID=cds317;Parent=gene320;Dbxref=Genbank:WP_012304126.1;Name=WP_012304126.1;gbkey=CDS;product=cupin;protein_id=WP_012304126.1;transl_table=11 NZ_CP008943.1 RefSeq gene 363524 364597 . + . ID=gene321;Name=DJ40_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01610;old_locus_tag=DJ40_322 NZ_CP008943.1 Protein Homology CDS 363524 364597 . + 0 ID=cds318;Parent=gene321;Dbxref=Genbank:WP_002211257.1;Name=WP_002211257.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11 NZ_CP008943.1 RefSeq gene 365373 366278 . + . ID=gene322;Name=DJ40_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01615;old_locus_tag=DJ40_323 NZ_CP008943.1 Protein Homology CDS 365373 366278 . + 0 ID=cds319;Parent=gene322;Dbxref=Genbank:WP_002211258.1;Name=WP_002211258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211258.1;transl_table=11 NZ_CP008943.1 RefSeq gene 366284 367216 . + . ID=gene323;Name=DJ40_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01620;old_locus_tag=DJ40_324 NZ_CP008943.1 Protein Homology CDS 366284 367216 . + 0 ID=cds320;Parent=gene323;Dbxref=Genbank:WP_032466381.1;Name=WP_032466381.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466381.1;transl_table=11 NZ_CP008943.1 RefSeq gene 367203 368153 . + . ID=gene324;Name=DJ40_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01625;old_locus_tag=DJ40_325 NZ_CP008943.1 Protein Homology CDS 367203 368153 . + 0 ID=cds321;Parent=gene324;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NZ_CP008943.1 RefSeq gene 368494 369174 . + . ID=gene325;Name=DJ40_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01630;old_locus_tag=DJ40_327 NZ_CP008943.1 Protein Homology CDS 368494 369174 . + 0 ID=cds322;Parent=gene325;Dbxref=Genbank:WP_032466380.1;Name=WP_032466380.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_032466380.1;transl_table=11 NZ_CP008943.1 RefSeq gene 369279 369938 . + . ID=gene326;Name=DJ40_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01635;old_locus_tag=DJ40_328 NZ_CP008943.1 Protein Homology CDS 369279 369938 . + 0 ID=cds323;Parent=gene326;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11 NZ_CP008943.1 RefSeq gene 370073 370711 . - . ID=gene327;Name=DJ40_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01640;old_locus_tag=DJ40_329 NZ_CP008943.1 Protein Homology CDS 370073 370711 . - 0 ID=cds324;Parent=gene327;Dbxref=Genbank:WP_002211263.1;Name=WP_002211263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211263.1;transl_table=11 NZ_CP008943.1 RefSeq gene 370767 370955 . + . ID=gene328;Name=DJ40_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01645 NZ_CP008943.1 Protein Homology CDS 370767 370955 . + 0 ID=cds325;Parent=gene328;Dbxref=Genbank:WP_032466379.1;Name=WP_032466379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466379.1;transl_table=11 NZ_CP008943.1 RefSeq gene 370958 373069 . - . ID=gene329;Name=DJ40_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01650;old_locus_tag=DJ40_330 NZ_CP008943.1 Protein Homology CDS 370958 373069 . - 0 ID=cds326;Parent=gene329;Dbxref=Genbank:WP_038399894.1;Name=WP_038399894.1;gbkey=CDS;product=membrane protein;protein_id=WP_038399894.1;transl_table=11 NZ_CP008943.1 RefSeq gene 373646 375808 . + . ID=gene330;Name=DJ40_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01655 NZ_CP008943.1 Protein Homology CDS 373646 375808 . + 0 ID=cds327;Parent=gene330;Dbxref=Genbank:WP_038399895.1;Name=WP_038399895.1;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=WP_038399895.1;transl_table=11 NZ_CP008943.1 RefSeq gene 375932 377590 . + . ID=gene331;Name=DJ40_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01660;old_locus_tag=DJ40_333 NZ_CP008943.1 Protein Homology CDS 375932 377590 . + 0 ID=cds328;Parent=gene331;Dbxref=Genbank:WP_038401542.1;Name=WP_038401542.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401542.1;transl_table=11 NZ_CP008943.1 RefSeq gene 377760 378224 . + . ID=gene332;Name=DJ40_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01665;old_locus_tag=DJ40_334 NZ_CP008943.1 Protein Homology CDS 377760 378224 . + 0 ID=cds329;Parent=gene332;Dbxref=Genbank:WP_032466377.1;Name=WP_032466377.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466377.1;transl_table=11 NZ_CP008943.1 RefSeq gene 378385 379572 . - . ID=gene333;Name=DJ40_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01670;old_locus_tag=DJ40_335 NZ_CP008943.1 Protein Homology CDS 378385 379572 . - 0 ID=cds330;Parent=gene333;Dbxref=Genbank:WP_038399896.1;Name=WP_038399896.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_038399896.1;transl_table=11 NZ_CP008943.1 RefSeq gene 379569 380153 . - . ID=gene334;Name=DJ40_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01675;old_locus_tag=DJ40_336 NZ_CP008943.1 Protein Homology CDS 379569 380153 . - 0 ID=cds331;Parent=gene334;Dbxref=Genbank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11 NZ_CP008943.1 RefSeq gene 380150 381304 . - . ID=gene335;Name=DJ40_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01680;old_locus_tag=DJ40_337 NZ_CP008943.1 Protein Homology CDS 380150 381304 . - 0 ID=cds332;Parent=gene335;Dbxref=Genbank:WP_038399897.1;Name=WP_038399897.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_038399897.1;transl_table=11 NZ_CP008943.1 RefSeq gene 381304 382266 . - . ID=gene336;Name=DJ40_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01685;old_locus_tag=DJ40_338 NZ_CP008943.1 Protein Homology CDS 381304 382266 . - 0 ID=cds333;Parent=gene336;Dbxref=Genbank:WP_012413710.1;Name=WP_012413710.1;gbkey=CDS;product=NAD(P)H steroid dehydrogenase;protein_id=WP_012413710.1;transl_table=11 NZ_CP008943.1 RefSeq gene 382400 383686 . - . ID=gene337;Name=DJ40_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01690;old_locus_tag=DJ40_339 NZ_CP008943.1 Protein Homology CDS 382400 383686 . - 0 ID=cds334;Parent=gene337;Dbxref=Genbank:WP_038399898.1;Name=WP_038399898.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_038399898.1;transl_table=11 NZ_CP008943.1 RefSeq gene 383683 384489 . - . ID=gene338;Name=DJ40_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01695;old_locus_tag=DJ40_340 NZ_CP008943.1 Protein Homology CDS 383683 384489 . - 0 ID=cds335;Parent=gene338;Dbxref=Genbank:WP_011192381.1;Name=WP_011192381.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_011192381.1;transl_table=11 NZ_CP008943.1 RefSeq gene 384482 385498 . - . ID=gene339;Name=DJ40_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01700;old_locus_tag=DJ40_341 NZ_CP008943.1 Protein Homology CDS 384482 385498 . - 0 ID=cds336;Parent=gene339;Dbxref=Genbank:WP_011192380.1;Name=WP_011192380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192380.1;transl_table=11 NZ_CP008943.1 RefSeq gene 385512 386519 . - . ID=gene340;Name=DJ40_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01705;old_locus_tag=DJ40_342 NZ_CP008943.1 Protein Homology CDS 385512 386519 . - 0 ID=cds337;Parent=gene340;Dbxref=Genbank:WP_038399900.1;Name=WP_038399900.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_038399900.1;transl_table=11 NZ_CP008943.1 RefSeq gene 387514 389133 . + . ID=gene341;Name=DJ40_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01710;old_locus_tag=DJ40_343 NZ_CP008943.1 Protein Homology CDS 387514 389133 . + 0 ID=cds338;Parent=gene341;Dbxref=Genbank:WP_038399901.1;Name=WP_038399901.1;gbkey=CDS;product=chorismate-binding protein;protein_id=WP_038399901.1;transl_table=11 NZ_CP008943.1 RefSeq gene 389311 389883 . - . ID=gene342;Name=DJ40_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01715;old_locus_tag=DJ40_344 NZ_CP008943.1 Protein Homology CDS 389311 389883 . - 0 ID=cds339;Parent=gene342;Dbxref=Genbank:WP_012105167.1;Name=WP_012105167.1;gbkey=CDS;product=cold inducible protein Ves;protein_id=WP_012105167.1;transl_table=11 NZ_CP008943.1 RefSeq gene 389883 391253 . - . ID=gene343;Name=DJ40_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01720;old_locus_tag=DJ40_345 NZ_CP008943.1 Protein Homology CDS 389883 391253 . - 0 ID=cds340;Parent=gene343;Dbxref=Genbank:WP_038399902.1;Name=WP_038399902.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_038399902.1;transl_table=11 NZ_CP008943.1 RefSeq gene 391401 392168 . + . ID=gene344;Name=DJ40_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01725;old_locus_tag=DJ40_346 NZ_CP008943.1 Protein Homology CDS 391401 392168 . + 0 ID=cds341;Parent=gene344;Dbxref=Genbank:WP_038399903.1;Name=WP_038399903.1;gbkey=CDS;product=histidine utilization repressor;protein_id=WP_038399903.1;transl_table=11 NZ_CP008943.1 RefSeq gene 392372 393592 . + . ID=gene345;Name=DJ40_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01730;old_locus_tag=DJ40_347 NZ_CP008943.1 Protein Homology CDS 392372 393592 . + 0 ID=cds342;Parent=gene345;Dbxref=Genbank:WP_011192374.1;Name=WP_011192374.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_011192374.1;transl_table=11 NZ_CP008943.1 RefSeq gene 393589 394395 . + . ID=gene346;Name=DJ40_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01735;old_locus_tag=DJ40_348 NZ_CP008943.1 Protein Homology CDS 393589 394395 . + 0 ID=cds343;Parent=gene346;Dbxref=Genbank:WP_011192373.1;Name=WP_011192373.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_011192373.1;transl_table=11 NZ_CP008943.1 RefSeq gene 394990 396072 . - . ID=gene347;Name=DJ40_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01740;old_locus_tag=DJ40_349 NZ_CP008943.1 Protein Homology CDS 394990 396072 . - 0 ID=cds344;Parent=gene347;Dbxref=Genbank:WP_002230843.1;Name=WP_002230843.1;gbkey=CDS;product=porin;protein_id=WP_002230843.1;transl_table=11 NZ_CP008943.1 RefSeq gene 396791 397783 . - . ID=gene348;Name=DJ40_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01745;old_locus_tag=DJ40_350 NZ_CP008943.1 Protein Homology CDS 396791 397783 . - 0 ID=cds345;Parent=gene348;Dbxref=Genbank:WP_002212028.1;Name=WP_002212028.1;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=WP_002212028.1;transl_table=11 NZ_CP008943.1 RefSeq gene 397844 399187 . - . ID=gene349;Name=DJ40_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01750;old_locus_tag=DJ40_351 NZ_CP008943.1 Protein Homology CDS 397844 399187 . - 0 ID=cds346;Parent=gene349;Dbxref=Genbank:WP_002212029.1;Name=WP_002212029.1;gbkey=CDS;product=N-succinylarginine dihydrolase;protein_id=WP_002212029.1;transl_table=11 NZ_CP008943.1 RefSeq gene 399211 400728 . - . ID=gene350;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=DJ40_RS01755;old_locus_tag=DJ40_352 NZ_CP008943.1 Protein Homology CDS 399211 400728 . - 0 ID=cds347;Parent=gene350;Dbxref=Genbank:WP_002212030.1;Name=WP_002212030.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;product=N-succinylglutamate 5-semialdehyde dehydrogenase;protein_id=WP_002212030.1;transl_table=11 NZ_CP008943.1 RefSeq gene 400725 401777 . - . ID=gene351;Name=DJ40_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01760;old_locus_tag=DJ40_353 NZ_CP008943.1 Protein Homology CDS 400725 401777 . - 0 ID=cds348;Parent=gene351;Dbxref=Genbank:WP_002212031.1;Name=WP_002212031.1;gbkey=CDS;product=arginine N-succinyltransferase;protein_id=WP_002212031.1;transl_table=11 NZ_CP008943.1 RefSeq gene 401807 403051 . - . ID=gene352;Name=DJ40_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01765;old_locus_tag=DJ40_354 NZ_CP008943.1 Protein Homology CDS 401807 403051 . - 0 ID=cds349;Parent=gene352;Dbxref=Genbank:WP_002216140.1;Name=WP_002216140.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;gbkey=CDS;product=succinylornithine aminotransferase;protein_id=WP_002216140.1;transl_table=11 NZ_CP008943.1 RefSeq gene 403249 403392 . - . ID=gene353;Name=DJ40_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01770 NZ_CP008943.1 Protein Homology CDS 403249 403392 . - 0 ID=cds350;Parent=gene353;Dbxref=Genbank:WP_002353347.1;Name=WP_002353347.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353347.1;transl_table=11 NZ_CP008943.1 RefSeq gene 403736 405157 . - . ID=gene354;Name=DJ40_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01775;old_locus_tag=DJ40_357 NZ_CP008943.1 Protein Homology CDS 403736 405157 . - 0 ID=cds351;Parent=gene354;Dbxref=Genbank:WP_002212033.1;Name=WP_002212033.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212033.1;transl_table=11 NZ_CP008943.1 RefSeq gene 405467 407248 . + . ID=gene355;Name=DJ40_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01780;old_locus_tag=DJ40_358 NZ_CP008943.1 Protein Homology CDS 405467 407248 . + 0 ID=cds352;Parent=gene355;Dbxref=Genbank:WP_038399904.1;Name=WP_038399904.1;gbkey=CDS;product=nitrate/nitrite two-component system sensor histidine kinase;protein_id=WP_038399904.1;transl_table=11 NZ_CP008943.1 RefSeq gene 407854 408897 . + . ID=gene356;Name=DJ40_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01785;old_locus_tag=DJ40_359 NZ_CP008943.1 Protein Homology CDS 407854 408897 . + 0 ID=cds353;Parent=gene356;Dbxref=Genbank:WP_049862771.1;Name=WP_049862771.1;gbkey=CDS;product=calcium:proton antiporter;protein_id=WP_049862771.1;transl_table=11 NZ_CP008943.1 RefSeq gene 409000 409788 . - . ID=gene357;Name=DJ40_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01790;old_locus_tag=DJ40_360 NZ_CP008943.1 Protein Homology CDS 409000 409788 . - 0 ID=cds354;Parent=gene357;Dbxref=Genbank:WP_002212037.1;Name=WP_002212037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212037.1;transl_table=11 NZ_CP008943.1 RefSeq gene 409848 410126 . - . ID=gene358;Name=DJ40_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01795;old_locus_tag=DJ40_361 NZ_CP008943.1 Protein Homology CDS 409848 410126 . - 0 ID=cds355;Parent=gene358;Dbxref=Genbank:WP_012304141.1;Name=WP_012304141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304141.1;transl_table=11 NZ_CP008943.1 RefSeq gene 410565 411275 . - . ID=gene359;Name=DJ40_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01800;old_locus_tag=DJ40_362 NZ_CP008943.1 Protein Homology CDS 410565 411275 . - 0 ID=cds356;Parent=gene359;Dbxref=Genbank:WP_002367661.1;Name=WP_002367661.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002367661.1;transl_table=11 NZ_CP008943.1 RefSeq gene 411816 412283 . - . ID=gene360;Name=hmsS;gbkey=Gene;gene=hmsS;gene_biotype=protein_coding;locus_tag=DJ40_RS01805;old_locus_tag=DJ40_363 NZ_CP008943.1 Protein Homology CDS 411816 412283 . - 0 ID=cds357;Parent=gene360;Dbxref=Genbank:WP_002212041.1;Name=WP_002212041.1;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsS;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_002212041.1;transl_table=11 NZ_CP008943.1 RefSeq gene 412280 413614 . - . ID=gene361;Name=DJ40_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01810;old_locus_tag=DJ40_364 NZ_CP008943.1 Protein Homology CDS 412280 413614 . - 0 ID=cds358;Parent=gene361;Dbxref=Genbank:WP_038399905.1;Name=WP_038399905.1;Note=predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein;gbkey=CDS;product=N-glycosyltransferase;protein_id=WP_038399905.1;transl_table=11 NZ_CP008943.1 RefSeq gene 413604 415625 . - . ID=gene362;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=DJ40_RS01815;old_locus_tag=DJ40_365 NZ_CP008943.1 Protein Homology CDS 413604 415625 . - 0 ID=cds359;Parent=gene362;Dbxref=Genbank:WP_002212043.1;Name=WP_002212043.1;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export;gbkey=CDS;gene=pgaB;product=biofilm PGA synthesis lipoprotein PgaB;protein_id=WP_002212043.1;transl_table=11 NZ_CP008943.1 RefSeq gene 415638 418106 . - . ID=gene363;Name=hmsH;gbkey=Gene;gene=hmsH;gene_biotype=protein_coding;locus_tag=DJ40_RS01820;old_locus_tag=DJ40_366 NZ_CP008943.1 Protein Homology CDS 415638 418106 . - 0 ID=cds360;Parent=gene363;Dbxref=Genbank:WP_038399906.1;Name=WP_038399906.1;Note=in Yersinia this protein is important for biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsH;product=biofilm formation protein HmsH;protein_id=WP_038399906.1;transl_table=11 NZ_CP008943.1 RefSeq gene 418775 419992 . - . ID=gene364;Name=DJ40_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01825;old_locus_tag=DJ40_367 NZ_CP008943.1 Protein Homology CDS 418775 419992 . - 0 ID=cds361;Parent=gene364;Dbxref=Genbank:WP_011192365.1;Name=WP_011192365.1;gbkey=CDS;product=peptidase M24;protein_id=WP_011192365.1;transl_table=11 NZ_CP008943.1 RefSeq gene 420133 421020 . - . ID=gene365;Name=DJ40_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01830;old_locus_tag=DJ40_368 NZ_CP008943.1 Protein Homology CDS 420133 421020 . - 0 ID=cds362;Parent=gene365;Dbxref=Genbank:WP_002212046.1;Name=WP_002212046.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;product=tellurite resistance methyltransferase TehB;protein_id=WP_002212046.1;transl_table=11 NZ_CP008943.1 RefSeq gene 421193 421504 . - . ID=gene366;Name=DJ40_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01835;old_locus_tag=DJ40_369 NZ_CP008943.1 Protein Homology CDS 421193 421504 . - 0 ID=cds363;Parent=gene366;Dbxref=Genbank:WP_002227951.1;Name=WP_002227951.1;gbkey=CDS;product=cytochrome;protein_id=WP_002227951.1;transl_table=11 NZ_CP008943.1 RefSeq gene 421504 422001 . - . ID=gene367;Name=DJ40_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01840;old_locus_tag=DJ40_370 NZ_CP008943.1 Protein Homology CDS 421504 422001 . - 0 ID=cds364;Parent=gene367;Dbxref=Genbank:WP_002212048.1;Name=WP_002212048.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002212048.1;transl_table=11 NZ_CP008943.1 RefSeq gene 421991 422704 . - . ID=gene368;Name=DJ40_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01845;old_locus_tag=DJ40_371 NZ_CP008943.1 Protein Homology CDS 421991 422704 . - 0 ID=cds365;Parent=gene368;Dbxref=Genbank:WP_011192364.1;Name=WP_011192364.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_011192364.1;transl_table=11 NZ_CP008943.1 RefSeq gene 422708 423856 . - . ID=gene369;Name=DJ40_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01850;old_locus_tag=DJ40_372 NZ_CP008943.1 Protein Homology CDS 422708 423856 . - 0 ID=cds366;Parent=gene369;Dbxref=Genbank:WP_042592836.1;Name=WP_042592836.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_042592836.1;transl_table=11 NZ_CP008943.1 RefSeq gene 423879 425171 . - . ID=gene370;Name=DJ40_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01855;old_locus_tag=DJ40_373 NZ_CP008943.1 Protein Homology CDS 423879 425171 . - 0 ID=cds367;Parent=gene370;Dbxref=Genbank:WP_002212051.1;Name=WP_002212051.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212051.1;transl_table=11 NZ_CP008943.1 RefSeq gene 425174 426583 . - . ID=gene371;Name=DJ40_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01860;old_locus_tag=DJ40_374 NZ_CP008943.1 Protein Homology CDS 425174 426583 . - 0 ID=cds368;Parent=gene371;Dbxref=Genbank:WP_002212052.1;Name=WP_002212052.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212052.1;transl_table=11 NZ_CP008943.1 RefSeq gene 426884 427411 . - . ID=gene372;Name=DJ40_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01865;old_locus_tag=DJ40_375 NZ_CP008943.1 Protein Homology CDS 426884 427411 . - 0 ID=cds369;Parent=gene372;Dbxref=Genbank:WP_002212053.1;Name=WP_002212053.1;gbkey=CDS;product=iron transporter;protein_id=WP_002212053.1;transl_table=11 NZ_CP008943.1 RefSeq gene 427615 429534 . - . ID=gene373;Name=DJ40_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01870;old_locus_tag=DJ40_376 NZ_CP008943.1 Protein Homology CDS 427615 429534 . - 0 ID=cds370;Parent=gene373;Dbxref=Genbank:WP_011192362.1;Name=WP_011192362.1;gbkey=CDS;product=iron permease;protein_id=WP_011192362.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 429960 430127 . + . ID=id16;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 430134 431774 . - . ID=gene374;Name=DJ40_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01875;old_locus_tag=DJ40_377 NZ_CP008943.1 Protein Homology CDS 430134 431774 . - 0 ID=cds371;Parent=gene374;Dbxref=Genbank:WP_038399908.1;Name=WP_038399908.1;gbkey=CDS;product=MFS transporter;protein_id=WP_038399908.1;transl_table=11 NZ_CP008943.1 RefSeq gene 431885 432892 . - . ID=gene375;Name=DJ40_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01880;old_locus_tag=DJ40_378 NZ_CP008943.1 Protein Homology CDS 431885 432892 . - 0 ID=cds372;Parent=gene375;Dbxref=Genbank:WP_038399909.1;Name=WP_038399909.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_038399909.1;transl_table=11 NZ_CP008943.1 RefSeq gene 434103 434873 . + . ID=gene376;Name=DJ40_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01885;old_locus_tag=DJ40_379 NZ_CP008943.1 Protein Homology CDS 434103 434873 . + 0 ID=cds373;Parent=gene376;Dbxref=Genbank:WP_038399911.1;Name=WP_038399911.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_038399911.1;transl_table=11 NZ_CP008943.1 RefSeq gene 435638 437167 . + . ID=gene377;Name=DJ40_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01890;old_locus_tag=DJ40_380 NZ_CP008943.1 Protein Homology CDS 435638 437167 . + 0 ID=cds374;Parent=gene377;Dbxref=Genbank:WP_002212059.1;Name=WP_002212059.1;Note=involved in the transporte of L-asparagine;gbkey=CDS;product=L-asparagine permease;protein_id=WP_002212059.1;transl_table=11 NZ_CP008943.1 RefSeq gene 437363 438523 . - . ID=gene378;Name=DJ40_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01895;old_locus_tag=DJ40_381 NZ_CP008943.1 Protein Homology CDS 437363 438523 . - 0 ID=cds375;Parent=gene378;Dbxref=Genbank:WP_002212060.1;Name=WP_002212060.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002212060.1;transl_table=11 NZ_CP008943.1 RefSeq gene 438875 439474 . + . ID=gene379;Name=DJ40_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01900;old_locus_tag=DJ40_382 NZ_CP008943.1 Protein Homology CDS 438875 439474 . + 0 ID=cds376;Parent=gene379;Dbxref=Genbank:WP_002212061.1;Name=WP_002212061.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002212061.1;transl_table=11 NZ_CP008943.1 RefSeq gene 439779 440759 . - . ID=gene380;Name=DJ40_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01905;old_locus_tag=DJ40_383 NZ_CP008943.1 Protein Homology CDS 439779 440759 . - 0 ID=cds377;Parent=gene380;Dbxref=Genbank:WP_038399913.1;Name=WP_038399913.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_038399913.1;transl_table=11 NZ_CP008943.1 RefSeq gene 440871 441740 . + . ID=gene381;Name=DJ40_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01910;old_locus_tag=DJ40_384 NZ_CP008943.1 Protein Homology CDS 440871 441740 . + 0 ID=cds378;Parent=gene381;Dbxref=Genbank:WP_011192361.1;Name=WP_011192361.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_011192361.1;transl_table=11 NZ_CP008943.1 RefSeq gene 441806 443035 . + . ID=gene382;Name=DJ40_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01915;old_locus_tag=DJ40_385 NZ_CP008943.1 Protein Homology CDS 441806 443035 . + 0 ID=cds379;Parent=gene382;Dbxref=Genbank:WP_002212064.1;Name=WP_002212064.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002212064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 443255 443815 . + . ID=gene383;Name=DJ40_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01920;old_locus_tag=DJ40_386 NZ_CP008943.1 Protein Homology CDS 443255 443815 . + 0 ID=cds380;Parent=gene383;Dbxref=Genbank:WP_011192360.1;Name=WP_011192360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192360.1;transl_table=11 NZ_CP008943.1 RefSeq gene 443840 444313 . + . ID=gene384;Name=DJ40_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01925;old_locus_tag=DJ40_387 NZ_CP008943.1 Protein Homology CDS 443840 444313 . + 0 ID=cds381;Parent=gene384;Dbxref=Genbank:WP_011192359.1;Name=WP_011192359.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192359.1;transl_table=11 NZ_CP008943.1 RefSeq gene 444388 445266 . - . ID=gene385;Name=DJ40_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01930;old_locus_tag=DJ40_388 NZ_CP008943.1 Protein Homology CDS 444388 445266 . - 0 ID=cds382;Parent=gene385;Dbxref=Genbank:WP_002212067.1;Name=WP_002212067.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212067.1;transl_table=11 NZ_CP008943.1 RefSeq gene 445361 446203 . + . ID=gene386;Name=DJ40_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01935;old_locus_tag=DJ40_389 NZ_CP008943.1 Protein Homology CDS 445361 446203 . + 0 ID=cds383;Parent=gene386;Dbxref=Genbank:WP_002212068.1;Name=WP_002212068.1;gbkey=CDS;product=citrate lyase subunit beta;protein_id=WP_002212068.1;transl_table=11 NZ_CP008943.1 RefSeq gene 446268 446795 . + . ID=gene387;Name=DJ40_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01940;old_locus_tag=DJ40_390 NZ_CP008943.1 Protein Homology CDS 446268 446795 . + 0 ID=cds384;Parent=gene387;Dbxref=Genbank:WP_002212069.1;Name=WP_002212069.1;gbkey=CDS;product=molybdenum cofactor biosynthesis protein MoeC;protein_id=WP_002212069.1;transl_table=11 NZ_CP008943.1 RefSeq gene 446818 448139 . + . ID=gene388;Name=DJ40_RS01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS01945;old_locus_tag=DJ40_391;pseudo=true NZ_CP008943.1 Protein Homology CDS 446818 448139 . + 0 ID=cds385;Parent=gene388;exception=annotated by transcript or proteomic data;gbkey=CDS;product=4-hydroxybutyrate CoA-transferase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 448965 449597 . + . ID=gene389;Name=DJ40_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01950;old_locus_tag=DJ40_393 NZ_CP008943.1 Protein Homology CDS 448965 449597 . + 0 ID=cds386;Parent=gene389;Dbxref=Genbank:WP_002212073.1;Name=WP_002212073.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002212073.1;transl_table=11 NZ_CP008943.1 RefSeq gene 449713 453564 . + . ID=gene390;Name=DJ40_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01955;old_locus_tag=DJ40_394 NZ_CP008943.1 Protein Homology CDS 449713 453564 . + 0 ID=cds387;Parent=gene390;Dbxref=Genbank:WP_032466357.1;Name=WP_032466357.1;gbkey=CDS;product=histidine kinase;protein_id=WP_032466357.1;transl_table=11 NZ_CP008943.1 RefSeq gene 453946 454476 . + . ID=gene391;Name=DJ40_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01960;old_locus_tag=DJ40_395 NZ_CP008943.1 Protein Homology CDS 453946 454476 . + 0 ID=cds388;Parent=gene391;Dbxref=Genbank:WP_002213971.1;Name=WP_002213971.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002213971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 454569 455300 . + . ID=gene392;Name=DJ40_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01965;old_locus_tag=DJ40_396 NZ_CP008943.1 Protein Homology CDS 454569 455300 . + 0 ID=cds389;Parent=gene392;Dbxref=Genbank:WP_011192355.1;Name=WP_011192355.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_011192355.1;transl_table=11 NZ_CP008943.1 RefSeq gene 455376 457940 . + . ID=gene393;Name=DJ40_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01970;old_locus_tag=DJ40_397 NZ_CP008943.1 Protein Homology CDS 455376 457940 . + 0 ID=cds390;Parent=gene393;Dbxref=Genbank:WP_032466356.1;Name=WP_032466356.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_032466356.1;transl_table=11 NZ_CP008943.1 RefSeq gene 457956 459305 . + . ID=gene394;Name=DJ40_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01975;old_locus_tag=DJ40_398 NZ_CP008943.1 Protein Homology CDS 457956 459305 . + 0 ID=cds391;Parent=gene394;Dbxref=Genbank:WP_002213964.1;Name=WP_002213964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213964.1;transl_table=11 NZ_CP008943.1 RefSeq gene 459302 460042 . + . ID=gene395;Name=DJ40_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01980;old_locus_tag=DJ40_399 NZ_CP008943.1 Protein Homology CDS 459302 460042 . + 0 ID=cds392;Parent=gene395;Dbxref=Genbank:WP_032466354.1;Name=WP_032466354.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_032466354.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 460322 460431 . + . ID=id17;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 460352 460427 . + . ID=gene396;Name=DJ40_RS01985;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS01985;old_locus_tag=DJ40_400 NZ_CP008943.1 tRNAscan-SE tRNA 460352 460427 . + . ID=rna3;Parent=gene396;anticodon=(pos:460385..460387);gbkey=tRNA;product=tRNA-Asn NZ_CP008943.1 tRNAscan-SE exon 460352 460427 . + . ID=id18;Parent=rna3;anticodon=(pos:460385..460387);gbkey=tRNA;product=tRNA-Asn NZ_CP008943.1 RefSeq gene 460487 460722 . + . ID=gene397;Name=DJ40_RS01990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS01990;pseudo=true NZ_CP008943.1 Protein Homology CDS 460487 460722 . + 0 ID=cds393;Parent=gene397;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 460732 461874 . - . ID=gene398;Name=DJ40_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS01995;old_locus_tag=DJ40_401 NZ_CP008943.1 Protein Homology CDS 460732 461874 . - 0 ID=cds394;Parent=gene398;Dbxref=Genbank:WP_032466352.1;Name=WP_032466352.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032466352.1;transl_table=11 NZ_CP008943.1 RefSeq gene 461899 462726 . - . ID=gene399;Name=DJ40_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02000;old_locus_tag=DJ40_402 NZ_CP008943.1 Protein Homology CDS 461899 462726 . - 0 ID=cds395;Parent=gene399;Dbxref=Genbank:WP_002213186.1;Name=WP_002213186.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 462719 463579 . - . ID=gene400;Name=DJ40_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02005;old_locus_tag=DJ40_403 NZ_CP008943.1 Protein Homology CDS 462719 463579 . - 0 ID=cds396;Parent=gene400;Dbxref=Genbank:WP_002213188.1;Name=WP_002213188.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NZ_CP008943.1 RefSeq gene 463646 464914 . - . ID=gene401;Name=DJ40_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02010;old_locus_tag=DJ40_404 NZ_CP008943.1 Protein Homology CDS 463646 464914 . - 0 ID=cds397;Parent=gene401;Dbxref=Genbank:WP_038399914.1;Name=WP_038399914.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_038399914.1;transl_table=11 NZ_CP008943.1 RefSeq gene 464944 465957 . - . ID=gene402;Name=DJ40_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02015;old_locus_tag=DJ40_405 NZ_CP008943.1 Protein Homology CDS 464944 465957 . - 0 ID=cds398;Parent=gene402;Dbxref=Genbank:WP_011192351.1;Name=WP_011192351.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_011192351.1;transl_table=11 NZ_CP008943.1 RefSeq gene 466365 466645 . + . ID=gene403;Name=DJ40_RS02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS02020;pseudo=true NZ_CP008943.1 Protein Homology CDS 466365 466645 . + 0 ID=cds399;Parent=gene403;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 466615 467412 . - . ID=gene404;Name=DJ40_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02025;old_locus_tag=DJ40_407 NZ_CP008943.1 Protein Homology CDS 466615 467412 . - 0 ID=cds400;Parent=gene404;Dbxref=Genbank:WP_002213201.1;Name=WP_002213201.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 467599 467730 . - . ID=gene405;Name=DJ40_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02030 NZ_CP008943.1 Protein Homology CDS 467599 467730 . - 0 ID=cds401;Parent=gene405;Dbxref=Genbank:WP_038399916.1;Name=WP_038399916.1;gbkey=CDS;product=transposase;protein_id=WP_038399916.1;transl_table=11 NZ_CP008943.1 RefSeq gene 468380 468814 . + . ID=gene406;Name=DJ40_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02040;old_locus_tag=DJ40_411 NZ_CP008943.1 Protein Homology CDS 468380 468814 . + 0 ID=cds402;Parent=gene406;Dbxref=Genbank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NZ_CP008943.1 RefSeq gene 468826 469395 . + . ID=gene407;Name=DJ40_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02045;old_locus_tag=DJ40_412 NZ_CP008943.1 Protein Homology CDS 468826 469395 . + 0 ID=cds403;Parent=gene407;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NZ_CP008943.1 RefSeq gene 469813 471011 . - . ID=gene408;Name=DJ40_RS02050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS02050;pseudo=true NZ_CP008943.1 Protein Homology CDS 469813 471011 . - 0 ID=cds404;Parent=gene408;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 470009 470156 . + . ID=id19;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 470851 471083 . + . ID=id20;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 471059 472135 . - . ID=gene409;Name=DJ40_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02055;old_locus_tag=DJ40_416 NZ_CP008943.1 Protein Homology CDS 471059 472135 . - 0 ID=cds405;Parent=gene409;Dbxref=Genbank:WP_024063241.1;Name=WP_024063241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063241.1;transl_table=11 NZ_CP008943.1 RefSeq gene 472201 472491 . - . ID=gene410;Name=DJ40_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02060;old_locus_tag=DJ40_417 NZ_CP008943.1 Protein Homology CDS 472201 472491 . - 0 ID=cds406;Parent=gene410;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11 NZ_CP008943.1 RefSeq gene 472472 472744 . - . ID=gene411;Name=DJ40_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02065;old_locus_tag=DJ40_418 NZ_CP008943.1 Protein Homology CDS 472472 472744 . - 0 ID=cds407;Parent=gene411;Dbxref=Genbank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;product=toxin;protein_id=WP_002213210.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 472815 473094 . + . ID=id21;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 472880 473134 . + . ID=gene412;Name=DJ40_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02070;old_locus_tag=DJ40_419 NZ_CP008943.1 Protein Homology CDS 472880 473134 . + 0 ID=cds408;Parent=gene412;Dbxref=Genbank:WP_038399917.1;Name=WP_038399917.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_038399917.1;transl_table=11 NZ_CP008943.1 RefSeq gene 473131 473430 . + . ID=gene413;Name=DJ40_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02075;old_locus_tag=DJ40_420 NZ_CP008943.1 Protein Homology CDS 473131 473430 . + 0 ID=cds409;Parent=gene413;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 473141 473373 . + . ID=id22;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 473415 477970 . + . ID=id23;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 473447 473683 . + . ID=gene414;Name=DJ40_RS02080;end_range=473683,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS02080;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 473447 473683 . + 0 ID=cds410;Parent=gene414;end_range=473683,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 473785 474264 . + . ID=gene415;Name=DJ40_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02085;old_locus_tag=DJ40_422 NZ_CP008943.1 Protein Homology CDS 473785 474264 . + 0 ID=cds411;Parent=gene415;Dbxref=Genbank:WP_012304197.1;Name=WP_012304197.1;gbkey=CDS;product=phage tail protein;protein_id=WP_012304197.1;transl_table=11 NZ_CP008943.1 RefSeq gene 474398 475573 . + . ID=gene416;Name=DJ40_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02090;old_locus_tag=DJ40_423 NZ_CP008943.1 Protein Homology CDS 474398 475573 . + 0 ID=cds412;Parent=gene416;Dbxref=Genbank:WP_012304198.1;Name=WP_012304198.1;gbkey=CDS;product=tail sheath protein;protein_id=WP_012304198.1;transl_table=11 NZ_CP008943.1 RefSeq gene 475585 476100 . + . ID=gene417;Name=DJ40_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02095;old_locus_tag=DJ40_424 NZ_CP008943.1 Protein Homology CDS 475585 476100 . + 0 ID=cds413;Parent=gene417;Dbxref=Genbank:WP_038399918.1;Name=WP_038399918.1;gbkey=CDS;product=major tail tube protein;protein_id=WP_038399918.1;transl_table=11 NZ_CP008943.1 RefSeq gene 476190 476501 . + . ID=gene418;Name=DJ40_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02100;old_locus_tag=DJ40_425 NZ_CP008943.1 Protein Homology CDS 476190 476501 . + 0 ID=cds414;Parent=gene418;Dbxref=Genbank:WP_049862804.1;Name=WP_049862804.1;gbkey=CDS;product=phage tail protein;protein_id=WP_049862804.1;transl_table=11 NZ_CP008943.1 RefSeq gene 476628 479521 . + . ID=gene419;Name=DJ40_RS02105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS02105;pseudo=true NZ_CP008943.1 Protein Homology CDS 476628 479521 . + 0 ID=cds415;Parent=gene419;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 478281 481434 . + . ID=id24;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 479533 479997 . + . ID=gene420;Name=DJ40_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02110;old_locus_tag=DJ40_428 NZ_CP008943.1 Protein Homology CDS 479533 479997 . + 0 ID=cds416;Parent=gene420;Dbxref=Genbank:WP_012304165.1;Name=WP_012304165.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_012304165.1;transl_table=11 NZ_CP008943.1 RefSeq gene 479994 481088 . + . ID=gene421;Name=DJ40_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02115;old_locus_tag=DJ40_429 NZ_CP008943.1 Protein Homology CDS 479994 481088 . + 0 ID=cds417;Parent=gene421;Dbxref=Genbank:WP_038399920.1;Name=WP_038399920.1;gbkey=CDS;product=late control protein D;protein_id=WP_038399920.1;transl_table=11 NZ_CP008943.1 RefSeq gene 481243 481500 . - . ID=gene422;Name=DJ40_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02120 NZ_CP008943.1 GeneMarkS+ CDS 481243 481500 . - 0 ID=cds418;Parent=gene422;Dbxref=Genbank:WP_038399921.1;Name=WP_038399921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399921.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 481499 481621 . + . ID=id25;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 481729 482736 . - . ID=gene423;Name=DJ40_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02125;old_locus_tag=DJ40_431 NZ_CP008943.1 Protein Homology CDS 481729 482736 . - 0 ID=cds419;Parent=gene423;Dbxref=Genbank:WP_012304167.1;Name=WP_012304167.1;gbkey=CDS;product=integrase;protein_id=WP_012304167.1;transl_table=11 NZ_CP008943.1 RefSeq gene 482736 483116 . - . ID=gene424;Name=DJ40_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02130;old_locus_tag=DJ40_432 NZ_CP008943.1 Protein Homology CDS 482736 483116 . - 0 ID=cds420;Parent=gene424;Dbxref=Genbank:WP_038399923.1;Name=WP_038399923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399923.1;transl_table=11 NZ_CP008943.1 RefSeq gene 483422 483964 . - . ID=gene425;Name=DJ40_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02135;old_locus_tag=DJ40_433 NZ_CP008943.1 Protein Homology CDS 483422 483964 . - 0 ID=cds421;Parent=gene425;Dbxref=Genbank:WP_032466344.1;Name=WP_032466344.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466344.1;transl_table=11 NZ_CP008943.1 RefSeq gene 483999 484367 . - . ID=gene426;Name=DJ40_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02140;old_locus_tag=DJ40_434 NZ_CP008943.1 Protein Homology CDS 483999 484367 . - 0 ID=cds422;Parent=gene426;Dbxref=Genbank:WP_032466343.1;Name=WP_032466343.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_032466343.1;transl_table=11 NZ_CP008943.1 RefSeq gene 484428 484619 . + . ID=gene427;Name=DJ40_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02145;old_locus_tag=DJ40_435 NZ_CP008943.1 Protein Homology CDS 484428 484619 . + 0 ID=cds423;Parent=gene427;Dbxref=Genbank:WP_012304171.1;Name=WP_012304171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304171.1;transl_table=11 NZ_CP008943.1 RefSeq gene 484632 484835 . + . ID=gene428;Name=DJ40_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02150;old_locus_tag=DJ40_436 NZ_CP008943.1 Protein Homology CDS 484632 484835 . + 0 ID=cds424;Parent=gene428;Dbxref=Genbank:WP_012304172.1;Name=WP_012304172.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_012304172.1;transl_table=11 NZ_CP008943.1 RefSeq gene 484847 485053 . + . ID=gene429;Name=DJ40_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02155;old_locus_tag=DJ40_437 NZ_CP008943.1 Protein Homology CDS 484847 485053 . + 0 ID=cds425;Parent=gene429;Dbxref=Genbank:WP_012304173.1;Name=WP_012304173.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 485050 485364 . + . ID=gene430;Name=DJ40_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02160;old_locus_tag=DJ40_438 NZ_CP008943.1 Protein Homology CDS 485050 485364 . + 0 ID=cds426;Parent=gene430;Dbxref=Genbank:WP_012304174.1;Name=WP_012304174.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304174.1;transl_table=11 NZ_CP008943.1 RefSeq gene 485506 485766 . + . ID=gene431;Name=DJ40_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02165;old_locus_tag=DJ40_440 NZ_CP008943.1 Protein Homology CDS 485506 485766 . + 0 ID=cds427;Parent=gene431;Dbxref=Genbank:WP_038399925.1;Name=WP_038399925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399925.1;transl_table=11 NZ_CP008943.1 RefSeq gene 485797 486102 . + . ID=gene432;Name=DJ40_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02170;old_locus_tag=DJ40_441 NZ_CP008943.1 Protein Homology CDS 485797 486102 . + 0 ID=cds428;Parent=gene432;Dbxref=Genbank:WP_038399926.1;Name=WP_038399926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399926.1;transl_table=11 NZ_CP008943.1 RefSeq gene 486185 486952 . + . ID=gene433;Name=DJ40_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02175;old_locus_tag=DJ40_442 NZ_CP008943.1 Protein Homology CDS 486185 486952 . + 0 ID=cds429;Parent=gene433;Dbxref=Genbank:WP_038399927.1;Name=WP_038399927.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399927.1;transl_table=11 NZ_CP008943.1 RefSeq gene 487078 487662 . + . ID=gene434;Name=DJ40_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02180;old_locus_tag=DJ40_443 NZ_CP008943.1 Protein Homology CDS 487078 487662 . + 0 ID=cds430;Parent=gene434;Dbxref=Genbank:WP_049862805.1;Name=WP_049862805.1;gbkey=CDS;product=3'-5' exonuclease;protein_id=WP_049862805.1;transl_table=11 NZ_CP008943.1 RefSeq gene 487668 488561 . + . ID=gene435;Name=DJ40_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02185;old_locus_tag=DJ40_444 NZ_CP008943.1 Protein Homology CDS 487668 488561 . + 0 ID=cds431;Parent=gene435;Dbxref=Genbank:WP_038401547.1;Name=WP_038401547.1;gbkey=CDS;product=adenine methylase;protein_id=WP_038401547.1;transl_table=11 NZ_CP008943.1 RefSeq gene 488558 489595 . + . ID=gene436;Name=DJ40_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02190;old_locus_tag=DJ40_445 NZ_CP008943.1 Protein Homology CDS 488558 489595 . + 0 ID=cds432;Parent=gene436;Dbxref=Genbank:WP_049862773.1;Name=WP_049862773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862773.1;transl_table=11 NZ_CP008943.1 RefSeq gene 489592 492147 . + . ID=gene437;Name=DJ40_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02195;old_locus_tag=DJ40_446 NZ_CP008943.1 Protein Homology CDS 489592 492147 . + 0 ID=cds433;Parent=gene437;Dbxref=Genbank:WP_038399930.1;Name=WP_038399930.1;gbkey=CDS;product=replication protein;protein_id=WP_038399930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 492128 492358 . + . ID=gene438;Name=DJ40_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02200;old_locus_tag=DJ40_447 NZ_CP008943.1 Protein Homology CDS 492128 492358 . + 0 ID=cds434;Parent=gene438;Dbxref=Genbank:WP_012413686.1;Name=WP_012413686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413686.1;transl_table=11 NZ_CP008943.1 RefSeq gene 492355 492699 . + . ID=gene439;Name=DJ40_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02205;old_locus_tag=DJ40_448 NZ_CP008943.1 Protein Homology CDS 492355 492699 . + 0 ID=cds435;Parent=gene439;Dbxref=Genbank:WP_012413685.1;Name=WP_012413685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413685.1;transl_table=11 NZ_CP008943.1 RefSeq gene 493398 493652 . - . ID=gene440;Name=DJ40_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02210;old_locus_tag=DJ40_449 NZ_CP008943.1 GeneMarkS+ CDS 493398 493652 . - 0 ID=cds436;Parent=gene440;Dbxref=Genbank:WP_038399932.1;Name=WP_038399932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399932.1;transl_table=11 NZ_CP008943.1 RefSeq gene 493801 494838 . - . ID=gene441;Name=DJ40_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02215;old_locus_tag=DJ40_450 NZ_CP008943.1 Protein Homology CDS 493801 494838 . - 0 ID=cds437;Parent=gene441;Dbxref=Genbank:WP_024063353.1;Name=WP_024063353.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063353.1;transl_table=11 NZ_CP008943.1 RefSeq gene 494838 496601 . - . ID=gene442;Name=DJ40_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02220;old_locus_tag=DJ40_451 NZ_CP008943.1 Protein Homology CDS 494838 496601 . - 0 ID=cds438;Parent=gene442;Dbxref=Genbank:WP_038399933.1;Name=WP_038399933.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_038399933.1;transl_table=11 NZ_CP008943.1 RefSeq gene 496793 497608 . + . ID=gene443;Name=DJ40_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02225;old_locus_tag=DJ40_452 NZ_CP008943.1 Protein Homology CDS 496793 497608 . + 0 ID=cds439;Parent=gene443;Dbxref=Genbank:WP_038399934.1;Name=WP_038399934.1;gbkey=CDS;product=precorrin-8W decarboxylase;protein_id=WP_038399934.1;transl_table=11 NZ_CP008943.1 RefSeq gene 497645 498700 . + . ID=gene444;Name=DJ40_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02230;old_locus_tag=DJ40_453 NZ_CP008943.1 Protein Homology CDS 497645 498700 . + 0 ID=cds440;Parent=gene444;Dbxref=Genbank:WP_032466330.1;Name=WP_032466330.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_032466330.1;transl_table=11 NZ_CP008943.1 RefSeq gene 498707 499360 . + . ID=gene445;Name=DJ40_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02235;old_locus_tag=DJ40_454 NZ_CP008943.1 Protein Homology CDS 498707 499360 . + 0 ID=cds441;Parent=gene445;Dbxref=Genbank:WP_038399936.1;Name=WP_038399936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399936.1;transl_table=11 NZ_CP008943.1 RefSeq gene 499594 500085 . + . ID=gene446;Name=DJ40_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02240;old_locus_tag=DJ40_455 NZ_CP008943.1 Protein Homology CDS 499594 500085 . + 0 ID=cds442;Parent=gene446;Dbxref=Genbank:WP_011192313.1;Name=WP_011192313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192313.1;transl_table=11 NZ_CP008943.1 RefSeq gene 500085 500288 . + . ID=gene447;Name=DJ40_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02245;old_locus_tag=DJ40_456 NZ_CP008943.1 Protein Homology CDS 500085 500288 . + 0 ID=cds443;Parent=gene447;Dbxref=Genbank:WP_011192312.1;Name=WP_011192312.1;gbkey=CDS;product=tail protein X;protein_id=WP_011192312.1;transl_table=11 NZ_CP008943.1 RefSeq gene 500525 500704 . + . ID=gene448;Name=DJ40_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02255 NZ_CP008943.1 Protein Homology CDS 500525 500704 . + 0 ID=cds444;Parent=gene448;Dbxref=Genbank:WP_032466665.1;Name=WP_032466665.1;gbkey=CDS;product=holin;protein_id=WP_032466665.1;transl_table=11 NZ_CP008943.1 RefSeq gene 500691 501086 . + . ID=gene449;Name=DJ40_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02260;old_locus_tag=DJ40_458 NZ_CP008943.1 Protein Homology CDS 500691 501086 . + 0 ID=cds445;Parent=gene449;Dbxref=Genbank:WP_011192310.1;Name=WP_011192310.1;gbkey=CDS;product=peptidase M15;protein_id=WP_011192310.1;transl_table=11 NZ_CP008943.1 RefSeq gene 501091 501516 . + . ID=gene450;Name=DJ40_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02265;old_locus_tag=DJ40_459 NZ_CP008943.1 Protein Homology CDS 501091 501516 . + 0 ID=cds446;Parent=gene450;Dbxref=Genbank:WP_032466327.1;Name=WP_032466327.1;gbkey=CDS;product=lysozyme;protein_id=WP_032466327.1;transl_table=11 NZ_CP008943.1 RefSeq gene 501615 502082 . + . ID=gene451;Name=DJ40_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02270;old_locus_tag=DJ40_460 NZ_CP008943.1 Protein Homology CDS 501615 502082 . + 0 ID=cds447;Parent=gene451;Dbxref=Genbank:WP_011192308.1;Name=WP_011192308.1;gbkey=CDS;product=tail protein;protein_id=WP_011192308.1;transl_table=11 NZ_CP008943.1 RefSeq gene 502079 502525 . + . ID=gene452;Name=DJ40_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02275;old_locus_tag=DJ40_461 NZ_CP008943.1 Protein Homology CDS 502079 502525 . + 0 ID=cds448;Parent=gene452;Dbxref=Genbank:WP_011192307.1;Name=WP_011192307.1;gbkey=CDS;product=virion morphogenesis protein;protein_id=WP_011192307.1;transl_table=11 NZ_CP008943.1 RefSeq gene 502544 502795 . - . ID=gene453;Name=DJ40_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02280;old_locus_tag=DJ40_462 NZ_CP008943.1 Protein Homology CDS 502544 502795 . - 0 ID=cds449;Parent=gene453;Dbxref=Genbank:WP_032466326.1;Name=WP_032466326.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466326.1;transl_table=11 NZ_CP008943.1 RefSeq gene 502857 503558 . + . ID=gene454;Name=DJ40_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02285;old_locus_tag=DJ40_463 NZ_CP008943.1 Protein Homology CDS 502857 503558 . + 0 ID=cds450;Parent=gene454;Dbxref=Genbank:WP_012304193.1;Name=WP_012304193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304193.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 503824 504103 . + . ID=id26;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 503889 504524 . + . ID=gene455;Name=DJ40_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02290;old_locus_tag=DJ40_465 NZ_CP008943.1 Protein Homology CDS 503889 504524 . + 0 ID=cds451;Parent=gene455;Dbxref=Genbank:WP_038399937.1;Name=WP_038399937.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_038399937.1;transl_table=11 NZ_CP008943.1 RefSeq gene 504521 504874 . + . ID=gene456;Name=DJ40_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02295;old_locus_tag=DJ40_466 NZ_CP008943.1 Protein Homology CDS 504521 504874 . + 0 ID=cds452;Parent=gene456;Dbxref=Genbank:WP_011192304.1;Name=WP_011192304.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_011192304.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 504531 504763 . + . ID=id27;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 504877 505785 . + . ID=gene457;Name=DJ40_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02300;old_locus_tag=DJ40_467 NZ_CP008943.1 Protein Homology CDS 504877 505785 . + 0 ID=cds453;Parent=gene457;Dbxref=Genbank:WP_011192303.1;Name=WP_011192303.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_011192303.1;transl_table=11 NZ_CP008943.1 RefSeq gene 505778 506386 . + . ID=gene458;Name=DJ40_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02305;old_locus_tag=DJ40_468 NZ_CP008943.1 Protein Homology CDS 505778 506386 . + 0 ID=cds454;Parent=gene458;Dbxref=Genbank:WP_011192302.1;Name=WP_011192302.1;gbkey=CDS;product=tail protein;protein_id=WP_011192302.1;transl_table=11 NZ_CP008943.1 RefSeq gene 506383 507822 . + . ID=gene459;Name=DJ40_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02310;old_locus_tag=DJ40_469 NZ_CP008943.1 Protein Homology CDS 506383 507822 . + 0 ID=cds455;Parent=gene459;Dbxref=Genbank:WP_032466321.1;Name=WP_032466321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466321.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 507464 512019 . + . ID=id28;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 507834 508313 . + . ID=gene460;Name=DJ40_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02315;old_locus_tag=DJ40_470 NZ_CP008943.1 Protein Homology CDS 507834 508313 . + 0 ID=cds456;Parent=gene460;Dbxref=Genbank:WP_038399939.1;Name=WP_038399939.1;gbkey=CDS;product=phage tail protein;protein_id=WP_038399939.1;transl_table=11 NZ_CP008943.1 RefSeq gene 508447 509622 . + . ID=gene461;Name=DJ40_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02320;old_locus_tag=DJ40_471 NZ_CP008943.1 Protein Homology CDS 508447 509622 . + 0 ID=cds457;Parent=gene461;Dbxref=Genbank:WP_038399940.1;Name=WP_038399940.1;gbkey=CDS;product=tail sheath protein;protein_id=WP_038399940.1;transl_table=11 NZ_CP008943.1 RefSeq gene 509634 510149 . + . ID=gene462;Name=DJ40_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02325;old_locus_tag=DJ40_472 NZ_CP008943.1 Protein Homology CDS 509634 510149 . + 0 ID=cds458;Parent=gene462;Dbxref=Genbank:WP_012105203.1;Name=WP_012105203.1;gbkey=CDS;product=major tail tube protein;protein_id=WP_012105203.1;transl_table=11 NZ_CP008943.1 RefSeq gene 510296 510550 . + . ID=gene463;Name=DJ40_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02330;old_locus_tag=DJ40_473 NZ_CP008943.1 Protein Homology CDS 510296 510550 . + 0 ID=cds459;Parent=gene463;Dbxref=Genbank:WP_042593125.1;Name=WP_042593125.1;gbkey=CDS;product=phage tail protein;protein_id=WP_042593125.1;transl_table=11 NZ_CP008943.1 RefSeq gene 510677 513592 . + . ID=gene464;Name=DJ40_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02335;old_locus_tag=DJ40_474 NZ_CP008943.1 Protein Homology CDS 510677 513592 . + 0 ID=cds460;Parent=gene464;Dbxref=Genbank:WP_038399942.1;Name=WP_038399942.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_038399942.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 512330 513091 . + . ID=id29;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 513106 515505 . + . ID=id30;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 513604 514068 . + . ID=gene465;Name=DJ40_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02340;old_locus_tag=DJ40_475 NZ_CP008943.1 Protein Homology CDS 513604 514068 . + 0 ID=cds461;Parent=gene465;Dbxref=Genbank:WP_038399943.1;Name=WP_038399943.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_038399943.1;transl_table=11 NZ_CP008943.1 RefSeq gene 514065 515159 . + . ID=gene466;Name=DJ40_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02345;old_locus_tag=DJ40_476 NZ_CP008943.1 Protein Homology CDS 514065 515159 . + 0 ID=cds462;Parent=gene466;Dbxref=Genbank:WP_038399944.1;Name=WP_038399944.1;gbkey=CDS;product=late control protein D;protein_id=WP_038399944.1;transl_table=11 NZ_CP008943.1 RefSeq gene 515234 515449 . + . ID=gene467;Name=DJ40_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02350;old_locus_tag=DJ40_477 NZ_CP008943.1 Protein Homology CDS 515234 515449 . + 0 ID=cds463;Parent=gene467;Dbxref=Genbank:WP_012105206.1;Name=WP_012105206.1;gbkey=CDS;product=phage transcriptional activator%2C Ogr/Delta;protein_id=WP_012105206.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 515603 515725 . + . ID=id31;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 515672 515757 . - . ID=gene468;Name=DJ40_RS02355;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS02355;old_locus_tag=DJ40_478 NZ_CP008943.1 tRNAscan-SE tRNA 515672 515757 . - . ID=rna4;Parent=gene468;anticodon=(pos:complement(515721..515723));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 515672 515757 . - . ID=id32;Parent=rna4;anticodon=(pos:complement(515721..515723));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 515768 515841 . - . ID=gene469;Name=DJ40_RS02360;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS02360;old_locus_tag=DJ40_479 NZ_CP008943.1 tRNAscan-SE tRNA 515768 515841 . - . ID=rna5;Parent=gene469;anticodon=(pos:complement(515807..515809));gbkey=tRNA;product=tRNA-Cys NZ_CP008943.1 tRNAscan-SE exon 515768 515841 . - . ID=id33;Parent=rna5;anticodon=(pos:complement(515807..515809));gbkey=tRNA;product=tRNA-Cys NZ_CP008943.1 RefSeq gene 515894 515969 . - . ID=gene470;Name=DJ40_RS02365;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS02365;old_locus_tag=DJ40_480 NZ_CP008943.1 tRNAscan-SE tRNA 515894 515969 . - . ID=rna6;Parent=gene470;anticodon=(pos:complement(515934..515936));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 tRNAscan-SE exon 515894 515969 . - . ID=id34;Parent=rna6;anticodon=(pos:complement(515934..515936));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 RefSeq gene 516114 516662 . - . ID=gene471;Name=DJ40_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02370;old_locus_tag=DJ40_481 NZ_CP008943.1 Protein Homology CDS 516114 516662 . - 0 ID=cds464;Parent=gene471;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NZ_CP008943.1 RefSeq gene 516721 518553 . - . ID=gene472;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=DJ40_RS02375;old_locus_tag=DJ40_482 NZ_CP008943.1 Protein Homology CDS 516721 518553 . - 0 ID=cds465;Parent=gene472;Dbxref=Genbank:WP_002220477.1;Name=WP_002220477.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_002220477.1;transl_table=11 NZ_CP008943.1 RefSeq gene 518546 519201 . - . ID=gene473;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=pseudogene;gene_synonym=uvrY;locus_tag=DJ40_RS02380;pseudo=true NZ_CP008943.1 Protein Homology CDS 518546 519201 . - 0 ID=cds466;Parent=gene473;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=sirA;product=response regulator;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 519863 520087 . + . ID=gene474;Name=DJ40_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02385;old_locus_tag=DJ40_485 NZ_CP008943.1 Protein Homology CDS 519863 520087 . + 0 ID=cds467;Parent=gene474;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11 NZ_CP008943.1 RefSeq gene 520215 520556 . + . ID=gene475;Name=DJ40_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02390;old_locus_tag=DJ40_486 NZ_CP008943.1 Protein Homology CDS 520215 520556 . + 0 ID=cds468;Parent=gene475;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11 NZ_CP008943.1 RefSeq gene 520584 520838 . - . ID=gene476;Name=DJ40_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02395;old_locus_tag=DJ40_487 NZ_CP008943.1 Protein Homology CDS 520584 520838 . - 0 ID=cds469;Parent=gene476;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 521178 521729 . - . ID=gene477;Name=DJ40_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02400;old_locus_tag=DJ40_488 NZ_CP008943.1 Protein Homology CDS 521178 521729 . - 0 ID=cds470;Parent=gene477;Dbxref=Genbank:WP_038399945.1;Name=WP_038399945.1;gbkey=CDS;product=attachment protein;protein_id=WP_038399945.1;transl_table=11 NZ_CP008943.1 RefSeq gene 522416 522491 . - . ID=gene478;Name=DJ40_RS02405;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS02405;old_locus_tag=DJ40_489 NZ_CP008943.1 tRNAscan-SE tRNA 522416 522491 . - . ID=rna7;Parent=gene478;anticodon=(pos:complement(522456..522458));gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 tRNAscan-SE exon 522416 522491 . - . ID=id35;Parent=rna7;anticodon=(pos:complement(522456..522458));gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 RefSeq gene 522844 524268 . + . ID=gene479;Name=DJ40_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02410;old_locus_tag=DJ40_490 NZ_CP008943.1 Protein Homology CDS 522844 524268 . + 0 ID=cds471;Parent=gene479;Dbxref=Genbank:WP_011192195.1;Name=WP_011192195.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_011192195.1;transl_table=11 NZ_CP008943.1 RefSeq gene 524394 525572 . - . ID=gene480;Name=DJ40_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02415;old_locus_tag=DJ40_491 NZ_CP008943.1 Protein Homology CDS 524394 525572 . - 0 ID=cds472;Parent=gene480;Dbxref=Genbank:WP_038399947.1;Name=WP_038399947.1;gbkey=CDS;product=N-acetylneuraminic acid mutarotase;protein_id=WP_038399947.1;transl_table=11 NZ_CP008943.1 RefSeq gene 525966 526565 . + . ID=gene481;Name=DJ40_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02420;old_locus_tag=DJ40_492 NZ_CP008943.1 Protein Homology CDS 525966 526565 . + 0 ID=cds473;Parent=gene481;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11 NZ_CP008943.1 RefSeq gene 526651 527955 . - . ID=gene482;Name=DJ40_RS02425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS02425;pseudo=true NZ_CP008943.1 Protein Homology CDS 526651 527955 . - 0 ID=cds474;Parent=gene482;gbkey=CDS;product=peroxidase;pseudo=true;transl_except=(pos:complement(527158..527160)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 527966 529096 . - . ID=gene483;Name=DJ40_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02430;old_locus_tag=DJ40_495 NZ_CP008943.1 Protein Homology CDS 527966 529096 . - 0 ID=cds475;Parent=gene483;Dbxref=Genbank:WP_012413669.1;Name=WP_012413669.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_012413669.1;transl_table=11 NZ_CP008943.1 RefSeq gene 529126 529974 . - . ID=gene484;Name=DJ40_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02435;old_locus_tag=DJ40_496 NZ_CP008943.1 Protein Homology CDS 529126 529974 . - 0 ID=cds476;Parent=gene484;Dbxref=Genbank:WP_038399948.1;Name=WP_038399948.1;gbkey=CDS;product=iron permease;protein_id=WP_038399948.1;transl_table=11 NZ_CP008943.1 RefSeq gene 530325 531809 . - . ID=gene485;Name=DJ40_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02440;old_locus_tag=DJ40_497 NZ_CP008943.1 Protein Homology CDS 530325 531809 . - 0 ID=cds477;Parent=gene485;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11 NZ_CP008943.1 RefSeq gene 531839 532036 . - . ID=gene486;Name=DJ40_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02445;old_locus_tag=DJ40_498 NZ_CP008943.1 Protein Homology CDS 531839 532036 . - 0 ID=cds478;Parent=gene486;Dbxref=Genbank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211163.1;transl_table=11 NZ_CP008943.1 RefSeq gene 532381 536352 . + . ID=gene487;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=DJ40_RS02450;old_locus_tag=DJ40_499 NZ_CP008943.1 Protein Homology CDS 532381 536352 . + 0 ID=cds479;Parent=gene487;Dbxref=Genbank:WP_038399949.1;Name=WP_038399949.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=transcriptional regulator;protein_id=WP_038399949.1;transl_table=11 NZ_CP008943.1 RefSeq gene 536890 537183 . + . ID=gene488;Name=DJ40_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02455;old_locus_tag=DJ40_500 NZ_CP008943.1 Protein Homology CDS 536890 537183 . + 0 ID=cds480;Parent=gene488;Dbxref=Genbank:WP_012413668.1;Name=WP_012413668.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413668.1;transl_table=11 NZ_CP008943.1 RefSeq gene 537183 537554 . + . ID=gene489;Name=DJ40_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02460;old_locus_tag=DJ40_501 NZ_CP008943.1 Protein Homology CDS 537183 537554 . + 0 ID=cds481;Parent=gene489;Dbxref=Genbank:WP_002223875.1;Name=WP_002223875.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002223875.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 537690 537858 . + . ID=id36;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 537846 538607 . - . ID=gene490;Name=DJ40_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02465;old_locus_tag=DJ40_502 NZ_CP008943.1 Protein Homology CDS 537846 538607 . - 0 ID=cds482;Parent=gene490;Dbxref=Genbank:WP_002211159.1;Name=WP_002211159.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211159.1;transl_table=11 NZ_CP008943.1 RefSeq gene 538610 539272 . - . ID=gene491;Name=DJ40_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02470;old_locus_tag=DJ40_503 NZ_CP008943.1 Protein Homology CDS 538610 539272 . - 0 ID=cds483;Parent=gene491;Dbxref=Genbank:WP_011192190.1;Name=WP_011192190.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_011192190.1;transl_table=11 NZ_CP008943.1 RefSeq gene 539272 540072 . - . ID=gene492;Name=DJ40_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02475;old_locus_tag=DJ40_504 NZ_CP008943.1 Protein Homology CDS 539272 540072 . - 0 ID=cds484;Parent=gene492;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11 NZ_CP008943.1 RefSeq gene 540196 541188 . - . ID=gene493;Name=DJ40_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02480;old_locus_tag=DJ40_505 NZ_CP008943.1 Protein Homology CDS 540196 541188 . - 0 ID=cds485;Parent=gene493;Dbxref=Genbank:WP_011192189.1;Name=WP_011192189.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_011192189.1;transl_table=11 NZ_CP008943.1 RefSeq gene 541477 541986 . - . ID=gene494;Name=DJ40_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02485;old_locus_tag=DJ40_506 NZ_CP008943.1 Protein Homology CDS 541477 541986 . - 0 ID=cds486;Parent=gene494;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11 NZ_CP008943.1 RefSeq gene 542220 542942 . - . ID=gene495;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=DJ40_RS02490;old_locus_tag=DJ40_507 NZ_CP008943.1 Protein Homology CDS 542220 542942 . - 0 ID=cds487;Parent=gene495;Dbxref=Genbank:WP_011192188.1;Name=WP_011192188.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_011192188.1;transl_table=11 NZ_CP008943.1 RefSeq gene 543289 544398 . - . ID=gene496;Name=DJ40_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02495;old_locus_tag=DJ40_508 NZ_CP008943.1 Protein Homology CDS 543289 544398 . - 0 ID=cds488;Parent=gene496;Dbxref=Genbank:WP_002211152.1;Name=WP_002211152.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002211152.1;transl_table=11 NZ_CP008943.1 RefSeq gene 544695 546095 . + . ID=gene497;Name=DJ40_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02500;old_locus_tag=DJ40_509 NZ_CP008943.1 Protein Homology CDS 544695 546095 . + 0 ID=cds489;Parent=gene497;Dbxref=Genbank:WP_011192187.1;Name=WP_011192187.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_011192187.1;transl_table=11 NZ_CP008943.1 RefSeq gene 546106 546504 . + . ID=gene498;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=DJ40_RS02505;old_locus_tag=DJ40_510 NZ_CP008943.1 Protein Homology CDS 546106 546504 . + 0 ID=cds490;Parent=gene498;Dbxref=Genbank:WP_011192186.1;Name=WP_011192186.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_011192186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 546515 546877 . + . ID=gene499;Name=DJ40_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02510;old_locus_tag=DJ40_511 NZ_CP008943.1 Protein Homology CDS 546515 546877 . + 0 ID=cds491;Parent=gene499;Dbxref=Genbank:WP_011192185.1;Name=WP_011192185.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_011192185.1;transl_table=11 NZ_CP008943.1 RefSeq gene 546932 547171 . + . ID=gene500;Name=DJ40_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02515 NZ_CP008943.1 Protein Homology CDS 546932 547171 . + 0 ID=cds492;Parent=gene500;Dbxref=Genbank:WP_002215994.1;Name=WP_002215994.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215994.1;transl_table=11 NZ_CP008943.1 RefSeq gene 547178 548053 . + . ID=gene501;Name=DJ40_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02520;old_locus_tag=DJ40_512 NZ_CP008943.1 Protein Homology CDS 547178 548053 . + 0 ID=cds493;Parent=gene501;Dbxref=Genbank:WP_002211147.1;Name=WP_002211147.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NZ_CP008943.1 RefSeq gene 548407 551361 . + . ID=gene502;Name=DJ40_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02525;old_locus_tag=DJ40_513 NZ_CP008943.1 Protein Homology CDS 548407 551361 . + 0 ID=cds494;Parent=gene502;Dbxref=Genbank:WP_032466276.1;Name=WP_032466276.1;gbkey=CDS;product=metal-dependent phosphohydrolase;protein_id=WP_032466276.1;transl_table=11 NZ_CP008943.1 RefSeq gene 551522 552133 . + . ID=gene503;Name=DJ40_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02530;old_locus_tag=DJ40_514 NZ_CP008943.1 Protein Homology CDS 551522 552133 . + 0 ID=cds495;Parent=gene503;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11 NZ_CP008943.1 RefSeq gene 552319 552796 . - . ID=gene504;Name=DJ40_RS02535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS02535;pseudo=true NZ_CP008943.1 Protein Homology CDS 552319 552796 . - 0 ID=cds496;Parent=gene504;exception=annotated by transcript or proteomic data;gbkey=CDS;product=death-on-curing protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 552807 552986 . - . ID=gene505;Name=DJ40_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02540;old_locus_tag=DJ40_516 NZ_CP008943.1 Protein Homology CDS 552807 552986 . - 0 ID=cds497;Parent=gene505;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NZ_CP008943.1 RefSeq gene 553422 553733 . - . ID=gene506;Name=DJ40_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02545;old_locus_tag=DJ40_517 NZ_CP008943.1 Protein Homology CDS 553422 553733 . - 0 ID=cds498;Parent=gene506;Dbxref=Genbank:WP_002211144.1;Name=WP_002211144.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 554086 555798 . + . ID=gene507;Name=DJ40_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02550;old_locus_tag=DJ40_518 NZ_CP008943.1 Protein Homology CDS 554086 555798 . + 0 ID=cds499;Parent=gene507;Dbxref=Genbank:WP_002211143.1;Name=WP_002211143.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_002211143.1;transl_table=11 NZ_CP008943.1 RefSeq gene 555795 556787 . + . ID=gene508;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=DJ40_RS02555;old_locus_tag=DJ40_519 NZ_CP008943.1 Protein Homology CDS 555795 556787 . + 0 ID=cds500;Parent=gene508;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NZ_CP008943.1 RefSeq gene 556780 557496 . + . ID=gene509;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=DJ40_RS02560;old_locus_tag=DJ40_520 NZ_CP008943.1 Protein Homology CDS 556780 557496 . + 0 ID=cds501;Parent=gene509;Dbxref=Genbank:WP_038399951.1;Name=WP_038399951.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_038399951.1;transl_table=11 NZ_CP008943.1 RefSeq gene 557496 558896 . + . ID=gene510;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=DJ40_RS02565;old_locus_tag=DJ40_521 NZ_CP008943.1 Protein Homology CDS 557496 558896 . + 0 ID=cds502;Parent=gene510;Dbxref=Genbank:WP_038399952.1;Name=WP_038399952.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_038399952.1;transl_table=11 NZ_CP008943.1 RefSeq gene 558972 559418 . + . ID=gene511;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=DJ40_RS02570;old_locus_tag=DJ40_522 NZ_CP008943.1 Protein Homology CDS 558972 559418 . + 0 ID=cds503;Parent=gene511;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11 NZ_CP008943.1 RefSeq gene 559415 560767 . + . ID=gene512;Name=DJ40_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02575;old_locus_tag=DJ40_523 NZ_CP008943.1 Protein Homology CDS 559415 560767 . + 0 ID=cds504;Parent=gene512;Dbxref=Genbank:WP_038399953.1;Name=WP_038399953.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_038399953.1;transl_table=11 NZ_CP008943.1 RefSeq gene 561034 561504 . + . ID=gene513;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=DJ40_RS02580;old_locus_tag=DJ40_524 NZ_CP008943.1 Protein Homology CDS 561034 561504 . + 0 ID=cds505;Parent=gene513;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11 NZ_CP008943.1 RefSeq gene 561510 562511 . + . ID=gene514;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=DJ40_RS02585;old_locus_tag=DJ40_525 NZ_CP008943.1 Protein Homology CDS 561510 562511 . + 0 ID=cds506;Parent=gene514;Dbxref=Genbank:WP_011192177.1;Name=WP_011192177.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_011192177.1;transl_table=11 NZ_CP008943.1 RefSeq gene 562508 562924 . + . ID=gene515;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=DJ40_RS02590;old_locus_tag=DJ40_526 NZ_CP008943.1 Protein Homology CDS 562508 562924 . + 0 ID=cds507;Parent=gene515;Dbxref=Genbank:WP_011192176.1;Name=WP_011192176.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_011192176.1;transl_table=11 NZ_CP008943.1 RefSeq gene 562951 563505 . + . ID=gene516;Name=DJ40_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02595;old_locus_tag=DJ40_527 NZ_CP008943.1 Protein Homology CDS 562951 563505 . + 0 ID=cds508;Parent=gene516;Dbxref=Genbank:WP_038401551.1;Name=WP_038401551.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_038401551.1;transl_table=11 NZ_CP008943.1 RefSeq gene 563586 564326 . + . ID=gene517;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=DJ40_RS02600;old_locus_tag=DJ40_528 NZ_CP008943.1 Protein Homology CDS 563586 564326 . + 0 ID=cds509;Parent=gene517;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11 NZ_CP008943.1 RefSeq gene 564432 564701 . + . ID=gene518;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=DJ40_RS02605;old_locus_tag=DJ40_529 NZ_CP008943.1 Protein Homology CDS 564432 564701 . + 0 ID=cds510;Parent=gene518;Dbxref=Genbank:WP_002211131.1;Name=WP_002211131.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NZ_CP008943.1 RefSeq gene 564704 565486 . + . ID=gene519;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=DJ40_RS02610;old_locus_tag=DJ40_530 NZ_CP008943.1 Protein Homology CDS 564704 565486 . + 0 ID=cds511;Parent=gene519;Dbxref=Genbank:WP_011192174.1;Name=WP_011192174.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_011192174.1;transl_table=11 NZ_CP008943.1 RefSeq gene 565959 566558 . + . ID=gene520;Name=DJ40_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02615;old_locus_tag=DJ40_532 NZ_CP008943.1 Protein Homology CDS 565959 566558 . + 0 ID=cds512;Parent=gene520;Dbxref=Genbank:WP_011192173.1;Name=WP_011192173.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 566624 567583 . - . ID=gene521;Name=DJ40_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02620;old_locus_tag=DJ40_533 NZ_CP008943.1 Protein Homology CDS 566624 567583 . - 0 ID=cds513;Parent=gene521;Dbxref=Genbank:WP_012304218.1;Name=WP_012304218.1;gbkey=CDS;product=ribokinase-like domain-containing protein;protein_id=WP_012304218.1;transl_table=11 NZ_CP008943.1 RefSeq gene 567632 568654 . - . ID=gene522;Name=DJ40_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02625;old_locus_tag=DJ40_534 NZ_CP008943.1 Protein Homology CDS 567632 568654 . - 0 ID=cds514;Parent=gene522;Dbxref=Genbank:WP_011192171.1;Name=WP_011192171.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011192171.1;transl_table=11 NZ_CP008943.1 RefSeq gene 568657 570234 . - . ID=gene523;Name=DJ40_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02630;old_locus_tag=DJ40_535 NZ_CP008943.1 Protein Homology CDS 568657 570234 . - 0 ID=cds515;Parent=gene523;Dbxref=Genbank:WP_038399955.1;Name=WP_038399955.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038399955.1;transl_table=11 NZ_CP008943.1 RefSeq gene 570300 571295 . - . ID=gene524;Name=DJ40_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02635;old_locus_tag=DJ40_536 NZ_CP008943.1 Protein Homology CDS 570300 571295 . - 0 ID=cds516;Parent=gene524;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11 NZ_CP008943.1 RefSeq gene 571338 572417 . - . ID=gene525;Name=DJ40_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02640;old_locus_tag=DJ40_537 NZ_CP008943.1 Protein Homology CDS 571338 572417 . - 0 ID=cds517;Parent=gene525;Dbxref=Genbank:WP_012304219.1;Name=WP_012304219.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012304219.1;transl_table=11 NZ_CP008943.1 RefSeq gene 572547 574613 . - . ID=gene526;Name=DJ40_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02645;old_locus_tag=DJ40_538 NZ_CP008943.1 Protein Homology CDS 572547 574613 . - 0 ID=cds518;Parent=gene526;Dbxref=Genbank:WP_002211122.1;Name=WP_002211122.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002211122.1;transl_table=11 NZ_CP008943.1 RefSeq gene 574831 575832 . + . ID=gene527;Name=DJ40_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02650;old_locus_tag=DJ40_539 NZ_CP008943.1 Protein Homology CDS 574831 575832 . + 0 ID=cds519;Parent=gene527;Dbxref=Genbank:WP_002211121.1;Name=WP_002211121.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NZ_CP008943.1 RefSeq gene 575861 576841 . - . ID=gene528;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=DJ40_RS02655;old_locus_tag=DJ40_540 NZ_CP008943.1 Protein Homology CDS 575861 576841 . - 0 ID=cds520;Parent=gene528;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NZ_CP008943.1 RefSeq gene 576980 578644 . - . ID=gene529;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=DJ40_RS02660;old_locus_tag=DJ40_541 NZ_CP008943.1 Protein Homology CDS 576980 578644 . - 0 ID=cds521;Parent=gene529;Dbxref=Genbank:WP_002211119.1;Name=WP_002211119.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211119.1;transl_table=11 NZ_CP008943.1 RefSeq gene 578942 579886 . - . ID=gene530;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=DJ40_RS02665;old_locus_tag=DJ40_542 NZ_CP008943.1 Protein Homology CDS 578942 579886 . - 0 ID=cds522;Parent=gene530;Dbxref=Genbank:WP_002211118.1;Name=WP_002211118.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_002211118.1;transl_table=11 NZ_CP008943.1 RefSeq gene 579886 580995 . - . ID=gene531;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=DJ40_RS02670;old_locus_tag=DJ40_543 NZ_CP008943.1 Protein Homology CDS 579886 580995 . - 0 ID=cds523;Parent=gene531;Dbxref=Genbank:WP_038399957.1;Name=WP_038399957.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_038399957.1;transl_table=11 NZ_CP008943.1 RefSeq gene 581010 581741 . - . ID=gene532;Name=DJ40_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02675;old_locus_tag=DJ40_544 NZ_CP008943.1 Protein Homology CDS 581010 581741 . - 0 ID=cds524;Parent=gene532;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11 NZ_CP008943.1 RefSeq gene 581843 582625 . - . ID=gene533;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=DJ40_RS02680;old_locus_tag=DJ40_545 NZ_CP008943.1 Protein Homology CDS 581843 582625 . - 0 ID=cds525;Parent=gene533;Dbxref=Genbank:WP_011192166.1;Name=WP_011192166.1;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_011192166.1;transl_table=11 NZ_CP008943.1 RefSeq gene 582651 583406 . - . ID=gene534;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=DJ40_RS02685;old_locus_tag=DJ40_546 NZ_CP008943.1 Protein Homology CDS 582651 583406 . - 0 ID=cds526;Parent=gene534;Dbxref=Genbank:WP_011192165.1;Name=WP_011192165.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_011192165.1;transl_table=11 NZ_CP008943.1 RefSeq gene 583428 584714 . - . ID=gene535;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=DJ40_RS02690;old_locus_tag=DJ40_547 NZ_CP008943.1 Protein Homology CDS 583428 584714 . - 0 ID=cds527;Parent=gene535;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NZ_CP008943.1 RefSeq gene 584916 585602 . - . ID=gene536;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=DJ40_RS02695;old_locus_tag=DJ40_548 NZ_CP008943.1 Protein Homology CDS 584916 585602 . - 0 ID=cds528;Parent=gene536;Dbxref=Genbank:WP_011192164.1;Name=WP_011192164.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_011192164.1;transl_table=11 NZ_CP008943.1 RefSeq gene 585617 586021 . - . ID=gene537;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=DJ40_RS02700;old_locus_tag=DJ40_549 NZ_CP008943.1 Protein Homology CDS 585617 586021 . - 0 ID=cds529;Parent=gene537;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NZ_CP008943.1 RefSeq gene 586027 586440 . - . ID=gene538;Name=DJ40_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02705;old_locus_tag=DJ40_550 NZ_CP008943.1 Protein Homology CDS 586027 586440 . - 0 ID=cds530;Parent=gene538;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11 NZ_CP008943.1 RefSeq gene 586679 587392 . + . ID=gene539;Name=DJ40_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02710;old_locus_tag=DJ40_551 NZ_CP008943.1 Protein Homology CDS 586679 587392 . + 0 ID=cds531;Parent=gene539;Dbxref=Genbank:WP_038401552.1;Name=WP_038401552.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_038401552.1;transl_table=11 NZ_CP008943.1 RefSeq gene 587543 587845 . + . ID=gene540;Name=DJ40_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02715;old_locus_tag=DJ40_552 NZ_CP008943.1 Protein Homology CDS 587543 587845 . + 0 ID=cds532;Parent=gene540;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11 NZ_CP008943.1 RefSeq gene 587864 588304 . + . ID=gene541;Name=DJ40_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02720;old_locus_tag=DJ40_553 NZ_CP008943.1 Protein Homology CDS 587864 588304 . + 0 ID=cds533;Parent=gene541;Dbxref=Genbank:WP_012105285.1;Name=WP_012105285.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagella synthesis chaperone protein FlgN;protein_id=WP_012105285.1;transl_table=11 NZ_CP008943.1 RefSeq gene 588477 590567 . - . ID=gene542;Name=DJ40_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02725 NZ_CP008943.1 Protein Homology CDS 588477 590567 . - 0 ID=cds534;Parent=gene542;Dbxref=Genbank:WP_042592838.1;Name=WP_042592838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592838.1;transl_table=11 NZ_CP008943.1 RefSeq gene 590511 591302 . - . ID=gene543;Name=DJ40_RS02730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS02730;partial=true;pseudo=true;start_range=.,590511 NZ_CP008943.1 Protein Homology CDS 590511 591302 . - 0 ID=cds535;Parent=gene543;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,590511;transl_table=11 NZ_CP008943.1 RefSeq gene 592043 592465 . - . ID=gene544;Name=DJ40_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02735;old_locus_tag=DJ40_555 NZ_CP008943.1 Protein Homology CDS 592043 592465 . - 0 ID=cds536;Parent=gene544;Dbxref=Genbank:WP_011192161.1;Name=WP_011192161.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_011192161.1;transl_table=11 NZ_CP008943.1 RefSeq gene 592465 594543 . - . ID=gene545;Name=DJ40_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02740;old_locus_tag=DJ40_556 NZ_CP008943.1 Protein Homology CDS 592465 594543 . - 0 ID=cds537;Parent=gene545;Dbxref=Genbank:WP_012413652.1;Name=WP_012413652.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_012413652.1;transl_table=11 NZ_CP008943.1 RefSeq gene 594543 595703 . - . ID=gene546;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=DJ40_RS02745;old_locus_tag=DJ40_557 NZ_CP008943.1 Protein Homology CDS 594543 595703 . - 0 ID=cds538;Parent=gene546;Dbxref=Genbank:WP_002211099.1;Name=WP_002211099.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11 NZ_CP008943.1 RefSeq gene 596111 596569 . + . ID=gene547;Name=DJ40_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02750;old_locus_tag=DJ40_558 NZ_CP008943.1 Protein Homology CDS 596111 596569 . + 0 ID=cds539;Parent=gene547;Dbxref=Genbank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211098.1;transl_table=11 NZ_CP008943.1 RefSeq gene 596563 596889 . + . ID=gene548;Name=DJ40_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02755;old_locus_tag=DJ40_559 NZ_CP008943.1 Protein Homology CDS 596563 596889 . + 0 ID=cds540;Parent=gene548;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11 NZ_CP008943.1 RefSeq gene 596902 597132 . - . ID=gene549;Name=DJ40_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02760 NZ_CP008943.1 Protein Homology CDS 596902 597132 . - 0 ID=cds541;Parent=gene549;Dbxref=Genbank:WP_002218131.1;Name=WP_002218131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218131.1;transl_table=11 NZ_CP008943.1 RefSeq gene 597412 597753 . - . ID=gene550;Name=DJ40_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02765;old_locus_tag=DJ40_560 NZ_CP008943.1 Protein Homology CDS 597412 597753 . - 0 ID=cds542;Parent=gene550;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11 NZ_CP008943.1 RefSeq gene 597850 598734 . - . ID=gene551;Name=DJ40_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02770;old_locus_tag=DJ40_561 NZ_CP008943.1 Protein Homology CDS 597850 598734 . - 0 ID=cds543;Parent=gene551;Dbxref=Genbank:WP_038399959.1;Name=WP_038399959.1;gbkey=CDS;product=copper resistance protein CopD;protein_id=WP_038399959.1;transl_table=11 NZ_CP008943.1 RefSeq gene 598737 599123 . - . ID=gene552;Name=DJ40_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02775;old_locus_tag=DJ40_562 NZ_CP008943.1 Protein Homology CDS 598737 599123 . - 0 ID=cds544;Parent=gene552;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11 NZ_CP008943.1 RefSeq gene 599518 600027 . - . ID=gene553;Name=DJ40_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02780;old_locus_tag=DJ40_563 NZ_CP008943.1 Protein Homology CDS 599518 600027 . - 0 ID=cds545;Parent=gene553;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 600428 600658 . + . ID=gene554;Name=DJ40_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02785;old_locus_tag=DJ40_564 NZ_CP008943.1 Protein Homology CDS 600428 600658 . + 0 ID=cds546;Parent=gene554;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NZ_CP008943.1 RefSeq gene 600718 601668 . - . ID=gene555;Name=DJ40_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02790;old_locus_tag=DJ40_565 NZ_CP008943.1 Protein Homology CDS 600718 601668 . - 0 ID=cds547;Parent=gene555;Dbxref=Genbank:WP_011192157.1;Name=WP_011192157.1;gbkey=CDS;product=proline iminopeptidase;protein_id=WP_011192157.1;transl_table=11 NZ_CP008943.1 RefSeq gene 602387 604438 . - . ID=gene556;Name=DJ40_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02795;old_locus_tag=DJ40_567 NZ_CP008943.1 Protein Homology CDS 602387 604438 . - 0 ID=cds548;Parent=gene556;Dbxref=Genbank:WP_002211088.1;Name=WP_002211088.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=oligopeptidase B;protein_id=WP_002211088.1;transl_table=11 NZ_CP008943.1 RefSeq gene 604748 605173 . - . ID=gene557;Name=DJ40_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02800;old_locus_tag=DJ40_568 NZ_CP008943.1 Protein Homology CDS 604748 605173 . - 0 ID=cds549;Parent=gene557;Dbxref=Genbank:WP_012304226.1;Name=WP_012304226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304226.1;transl_table=11 NZ_CP008943.1 RefSeq gene 605265 605573 . - . ID=gene558;Name=DJ40_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02805;old_locus_tag=DJ40_569 NZ_CP008943.1 Protein Homology CDS 605265 605573 . - 0 ID=cds550;Parent=gene558;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11 NZ_CP008943.1 RefSeq gene 605613 605933 . - . ID=gene559;Name=DJ40_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02810;old_locus_tag=DJ40_570 NZ_CP008943.1 Protein Homology CDS 605613 605933 . - 0 ID=cds551;Parent=gene559;Dbxref=Genbank:WP_012105291.1;Name=WP_012105291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105291.1;transl_table=11 NZ_CP008943.1 RefSeq gene 606027 607409 . - . ID=gene560;Name=DJ40_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02815;old_locus_tag=DJ40_571 NZ_CP008943.1 Protein Homology CDS 606027 607409 . - 0 ID=cds552;Parent=gene560;Dbxref=Genbank:WP_011192156.1;Name=WP_011192156.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_011192156.1;transl_table=11 NZ_CP008943.1 RefSeq gene 607722 608903 . + . ID=gene561;Name=DJ40_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02820;old_locus_tag=DJ40_572 NZ_CP008943.1 Protein Homology CDS 607722 608903 . + 0 ID=cds553;Parent=gene561;Dbxref=Genbank:WP_011192155.1;Name=WP_011192155.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_011192155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 609029 609286 . - . ID=gene562;Name=DJ40_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02825;old_locus_tag=DJ40_573 NZ_CP008943.1 Protein Homology CDS 609029 609286 . - 0 ID=cds554;Parent=gene562;Dbxref=Genbank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211082.1;transl_table=11 NZ_CP008943.1 RefSeq gene 609451 610827 . + . ID=gene563;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=DJ40_RS02830;old_locus_tag=DJ40_574 NZ_CP008943.1 Protein Homology CDS 609451 610827 . + 0 ID=cds555;Parent=gene563;Dbxref=Genbank:WP_002211081.1;Name=WP_002211081.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase component I;protein_id=WP_002211081.1;transl_table=11 NZ_CP008943.1 RefSeq gene 610824 611423 . + . ID=gene564;Name=DJ40_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02835;old_locus_tag=DJ40_575 NZ_CP008943.1 Protein Homology CDS 610824 611423 . + 0 ID=cds556;Parent=gene564;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11 NZ_CP008943.1 RefSeq gene 612151 613515 . + . ID=gene565;Name=DJ40_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02840;old_locus_tag=DJ40_576 NZ_CP008943.1 Protein Homology CDS 612151 613515 . + 0 ID=cds557;Parent=gene565;Dbxref=Genbank:WP_011192152.1;Name=WP_011192152.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_011192152.1;transl_table=11 NZ_CP008943.1 RefSeq gene 613795 614292 . - . ID=gene566;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=DJ40_RS02845;old_locus_tag=DJ40_577 NZ_CP008943.1 Protein Homology CDS 613795 614292 . - 0 ID=cds558;Parent=gene566;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11 NZ_CP008943.1 RefSeq gene 614313 615875 . - . ID=gene567;Name=DJ40_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02850;old_locus_tag=DJ40_578 NZ_CP008943.1 Protein Homology CDS 614313 615875 . - 0 ID=cds559;Parent=gene567;Dbxref=Genbank:WP_012105296.1;Name=WP_012105296.1;gbkey=CDS;product=Pyoverdin chromophore biosynthetic protein pvcC;protein_id=WP_012105296.1;transl_table=11 NZ_CP008943.1 RefSeq gene 615943 617310 . - . ID=gene568;Name=DJ40_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02855;old_locus_tag=DJ40_579 NZ_CP008943.1 Protein Homology CDS 615943 617310 . - 0 ID=cds560;Parent=gene568;Dbxref=Genbank:WP_038399961.1;Name=WP_038399961.1;gbkey=CDS;product=4-hydroxyphenylacetate permease;protein_id=WP_038399961.1;transl_table=11 NZ_CP008943.1 RefSeq gene 617336 618142 . - . ID=gene569;Name=DJ40_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02860;old_locus_tag=DJ40_580 NZ_CP008943.1 Protein Homology CDS 617336 618142 . - 0 ID=cds561;Parent=gene569;Dbxref=Genbank:WP_002231102.1;Name=WP_002231102.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002231102.1;transl_table=11 NZ_CP008943.1 RefSeq gene 618153 618956 . - . ID=gene570;Name=DJ40_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02865;old_locus_tag=DJ40_581 NZ_CP008943.1 Protein Homology CDS 618153 618956 . - 0 ID=cds562;Parent=gene570;Dbxref=Genbank:WP_011192151.1;Name=WP_011192151.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_011192151.1;transl_table=11 NZ_CP008943.1 RefSeq gene 618950 619348 . - . ID=gene571;Name=DJ40_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02870;old_locus_tag=DJ40_582 NZ_CP008943.1 Protein Homology CDS 618950 619348 . - 0 ID=cds563;Parent=gene571;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11 NZ_CP008943.1 RefSeq gene 619373 620230 . - . ID=gene572;Name=DJ40_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02875;old_locus_tag=DJ40_583 NZ_CP008943.1 Protein Homology CDS 619373 620230 . - 0 ID=cds564;Parent=gene572;Dbxref=Genbank:WP_032466268.1;Name=WP_032466268.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_032466268.1;transl_table=11 NZ_CP008943.1 RefSeq gene 620349 621815 . - . ID=gene573;Name=DJ40_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02880;old_locus_tag=DJ40_584 NZ_CP008943.1 Protein Homology CDS 620349 621815 . - 0 ID=cds565;Parent=gene573;Dbxref=Genbank:WP_038399963.1;Name=WP_038399963.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_038399963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 621812 622576 . - . ID=gene574;Name=DJ40_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02885;old_locus_tag=DJ40_585 NZ_CP008943.1 Protein Homology CDS 621812 622576 . - 0 ID=cds566;Parent=gene574;Dbxref=Genbank:WP_002214882.1;Name=WP_002214882.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214882.1;transl_table=11 NZ_CP008943.1 RefSeq gene 622573 623205 . - . ID=gene575;Name=DJ40_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02890;old_locus_tag=DJ40_586 NZ_CP008943.1 Protein Homology CDS 622573 623205 . - 0 ID=cds567;Parent=gene575;Dbxref=Genbank:WP_011192147.1;Name=WP_011192147.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_011192147.1;transl_table=11 NZ_CP008943.1 RefSeq gene 623593 624060 . + . ID=gene576;Name=DJ40_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02895;old_locus_tag=DJ40_587 NZ_CP008943.1 Protein Homology CDS 623593 624060 . + 0 ID=cds568;Parent=gene576;Dbxref=Genbank:WP_032466264.1;Name=WP_032466264.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_032466264.1;transl_table=11 NZ_CP008943.1 RefSeq gene 624161 625705 . - . ID=gene577;Name=DJ40_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02900;old_locus_tag=DJ40_588 NZ_CP008943.1 Protein Homology CDS 624161 625705 . - 0 ID=cds569;Parent=gene577;Dbxref=Genbank:WP_002231099.1;Name=WP_002231099.1;gbkey=CDS;product=membrane protein;protein_id=WP_002231099.1;transl_table=11 NZ_CP008943.1 RefSeq gene 626416 627390 . + . ID=gene578;Name=DJ40_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02905;old_locus_tag=DJ40_589 NZ_CP008943.1 Protein Homology CDS 626416 627390 . + 0 ID=cds570;Parent=gene578;Dbxref=Genbank:WP_002211069.1;Name=WP_002211069.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NZ_CP008943.1 RefSeq gene 627482 628279 . + . ID=gene579;Name=DJ40_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02910;old_locus_tag=DJ40_590 NZ_CP008943.1 Protein Homology CDS 627482 628279 . + 0 ID=cds571;Parent=gene579;Dbxref=Genbank:WP_002211068.1;Name=WP_002211068.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NZ_CP008943.1 RefSeq gene 628295 629173 . + . ID=gene580;Name=DJ40_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02915;old_locus_tag=DJ40_591 NZ_CP008943.1 Protein Homology CDS 628295 629173 . + 0 ID=cds572;Parent=gene580;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NZ_CP008943.1 RefSeq gene 629373 629834 . + . ID=gene581;Name=DJ40_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02920;old_locus_tag=DJ40_592 NZ_CP008943.1 Protein Homology CDS 629373 629834 . + 0 ID=cds573;Parent=gene581;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11 NZ_CP008943.1 RefSeq gene 630263 630832 . + . ID=gene582;Name=DJ40_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02925;old_locus_tag=DJ40_593 NZ_CP008943.1 Protein Homology CDS 630263 630832 . + 0 ID=cds574;Parent=gene582;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11 NZ_CP008943.1 RefSeq gene 631009 633222 . - . ID=gene583;Name=DJ40_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02930;old_locus_tag=DJ40_594 NZ_CP008943.1 Protein Homology CDS 631009 633222 . - 0 ID=cds575;Parent=gene583;Dbxref=Genbank:WP_002211064.1;Name=WP_002211064.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 633644 635725 . + . ID=gene584;Name=DJ40_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02935;old_locus_tag=DJ40_595 NZ_CP008943.1 Protein Homology CDS 633644 635725 . + 0 ID=cds576;Parent=gene584;Dbxref=Genbank:WP_002211063.1;Name=WP_002211063.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211063.1;transl_table=11 NZ_CP008943.1 RefSeq gene 635947 636225 . + . ID=gene585;Name=DJ40_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02940;old_locus_tag=DJ40_596 NZ_CP008943.1 Protein Homology CDS 635947 636225 . + 0 ID=cds577;Parent=gene585;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NZ_CP008943.1 RefSeq gene 636447 637286 . - . ID=gene586;Name=DJ40_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02945;old_locus_tag=DJ40_597 NZ_CP008943.1 Protein Homology CDS 636447 637286 . - 0 ID=cds578;Parent=gene586;Dbxref=Genbank:WP_011192144.1;Name=WP_011192144.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_011192144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 637666 638421 . + . ID=gene587;Name=DJ40_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02950;old_locus_tag=DJ40_598 NZ_CP008943.1 Protein Homology CDS 637666 638421 . + 0 ID=cds579;Parent=gene587;Dbxref=Genbank:WP_012413644.1;Name=WP_012413644.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_012413644.1;transl_table=11 NZ_CP008943.1 cmsearch region 638469 638897 . - . ID=id37;Note=cspA;gbkey=misc_feature NZ_CP008943.1 RefSeq gene 638512 638721 . - . ID=gene588;Name=DJ40_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02955;old_locus_tag=DJ40_599 NZ_CP008943.1 Protein Homology CDS 638512 638721 . - 0 ID=cds580;Parent=gene588;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11 NZ_CP008943.1 RefSeq gene 638764 638880 . - . ID=gene589;Name=DJ40_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02960 NZ_CP008943.1 Protein Homology CDS 638764 638880 . - 0 ID=cds581;Parent=gene589;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11 NZ_CP008943.1 RefSeq gene 639646 639867 . - . ID=gene590;Name=DJ40_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02965 NZ_CP008943.1 Protein Homology CDS 639646 639867 . - 0 ID=cds582;Parent=gene590;Dbxref=Genbank:WP_032466263.1;Name=WP_032466263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466263.1;transl_table=11 NZ_CP008943.1 RefSeq gene 639882 640490 . + . ID=gene591;Name=DJ40_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02970;old_locus_tag=DJ40_601 NZ_CP008943.1 Protein Homology CDS 639882 640490 . + 0 ID=cds583;Parent=gene591;Dbxref=Genbank:WP_032466262.1;Name=WP_032466262.1;gbkey=CDS;product=phospholipid--lipid A palmitoyltransferase;protein_id=WP_032466262.1;transl_table=11 NZ_CP008943.1 RefSeq gene 640786 642159 . - . ID=gene592;Name=DJ40_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02975;old_locus_tag=DJ40_602 NZ_CP008943.1 Protein Homology CDS 640786 642159 . - 0 ID=cds584;Parent=gene592;Dbxref=Genbank:WP_002211055.1;Name=WP_002211055.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002211055.1;transl_table=11 NZ_CP008943.1 RefSeq gene 642396 642641 . - . ID=gene593;Name=DJ40_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02980;old_locus_tag=DJ40_603 NZ_CP008943.1 Protein Homology CDS 642396 642641 . - 0 ID=cds585;Parent=gene593;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11 NZ_CP008943.1 RefSeq gene 642750 643049 . - . ID=gene594;Name=DJ40_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02985;old_locus_tag=DJ40_604 NZ_CP008943.1 Protein Homology CDS 642750 643049 . - 0 ID=cds586;Parent=gene594;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11 NZ_CP008943.1 RefSeq gene 643312 643587 . - . ID=gene595;Name=DJ40_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02990;old_locus_tag=DJ40_605 NZ_CP008943.1 Protein Homology CDS 643312 643587 . - 0 ID=cds587;Parent=gene595;Dbxref=Genbank:WP_038399966.1;Name=WP_038399966.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 644170 644403 . + . ID=gene596;Name=DJ40_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS02995;old_locus_tag=DJ40_606 NZ_CP008943.1 Protein Homology CDS 644170 644403 . + 0 ID=cds588;Parent=gene596;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11 NZ_CP008943.1 RefSeq gene 644494 644733 . - . ID=gene597;Name=DJ40_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03000;old_locus_tag=DJ40_607 NZ_CP008943.1 Protein Homology CDS 644494 644733 . - 0 ID=cds589;Parent=gene597;Dbxref=Genbank:WP_011192141.1;Name=WP_011192141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192141.1;transl_table=11 NZ_CP008943.1 RefSeq gene 644944 645057 . - . ID=gene598;Name=DJ40_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03005;old_locus_tag=DJ40_608 NZ_CP008943.1 Protein Homology CDS 644944 645057 . - 0 ID=cds590;Parent=gene598;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11 NZ_CP008943.1 RefSeq gene 645288 645674 . + . ID=gene599;Name=DJ40_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03010;old_locus_tag=DJ40_609 NZ_CP008943.1 Protein Homology CDS 645288 645674 . + 0 ID=cds591;Parent=gene599;Dbxref=Genbank:WP_002224436.1;Name=WP_002224436.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002224436.1;transl_table=11 NZ_CP008943.1 RefSeq gene 645756 645920 . - . ID=gene600;Name=DJ40_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03015;old_locus_tag=DJ40_610 NZ_CP008943.1 Protein Homology CDS 645756 645920 . - 0 ID=cds592;Parent=gene600;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11 NZ_CP008943.1 RefSeq gene 646576 648294 . + . ID=gene601;Name=DJ40_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03020;old_locus_tag=DJ40_611 NZ_CP008943.1 Protein Homology CDS 646576 648294 . + 0 ID=cds593;Parent=gene601;Dbxref=Genbank:WP_002211045.1;Name=WP_002211045.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11 NZ_CP008943.1 RefSeq gene 648397 649248 . + . ID=gene602;Name=DJ40_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03025;old_locus_tag=DJ40_612 NZ_CP008943.1 Protein Homology CDS 648397 649248 . + 0 ID=cds594;Parent=gene602;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11 NZ_CP008943.1 RefSeq gene 649485 649769 . + . ID=gene603;Name=DJ40_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03030;old_locus_tag=DJ40_613 NZ_CP008943.1 Protein Homology CDS 649485 649769 . + 0 ID=cds595;Parent=gene603;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11 NZ_CP008943.1 RefSeq gene 650159 650971 . + . ID=gene604;Name=DJ40_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03035;old_locus_tag=DJ40_614 NZ_CP008943.1 Protein Homology CDS 650159 650971 . + 0 ID=cds596;Parent=gene604;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11 NZ_CP008943.1 RefSeq gene 651149 651224 . + . ID=gene605;Name=DJ40_RS03040;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS03040;old_locus_tag=DJ40_615 NZ_CP008943.1 tRNAscan-SE tRNA 651149 651224 . + . ID=rna8;Parent=gene605;anticodon=(pos:651182..651184);gbkey=tRNA;product=tRNA-Asn NZ_CP008943.1 tRNAscan-SE exon 651149 651224 . + . ID=id38;Parent=rna8;anticodon=(pos:651182..651184);gbkey=tRNA;product=tRNA-Asn NZ_CP008943.1 RefSeq gene 651387 652403 . - . ID=gene606;Name=DJ40_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03045;old_locus_tag=DJ40_616 NZ_CP008943.1 Protein Homology CDS 651387 652403 . - 0 ID=cds597;Parent=gene606;Dbxref=Genbank:WP_002230719.1;Name=WP_002230719.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230719.1;transl_table=11 NZ_CP008943.1 RefSeq gene 652758 654065 . + . ID=gene607;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=DJ40_RS03050;old_locus_tag=DJ40_617 NZ_CP008943.1 Protein Homology CDS 652758 654065 . + 0 ID=cds598;Parent=gene607;Dbxref=Genbank:WP_002230721.1;Name=WP_002230721.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_002230721.1;transl_table=11 NZ_CP008943.1 RefSeq gene 654143 656269 . + . ID=gene608;Name=DJ40_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03055;old_locus_tag=DJ40_618 NZ_CP008943.1 Protein Homology CDS 654143 656269 . + 0 ID=cds599;Parent=gene608;Dbxref=Genbank:WP_032466260.1;Name=WP_032466260.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_032466260.1;transl_table=11 NZ_CP008943.1 RefSeq gene 656286 656449 . + . ID=gene609;Name=DJ40_RS03060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03060;old_locus_tag=DJ40_619;pseudo=true NZ_CP008943.1 Protein Homology CDS 656286 656449 . + 0 ID=cds600;Parent=gene609;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 656675 657415 . - . ID=gene610;Name=DJ40_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03065;old_locus_tag=DJ40_621 NZ_CP008943.1 Protein Homology CDS 656675 657415 . - 0 ID=cds601;Parent=gene610;Dbxref=Genbank:WP_002213120.1;Name=WP_002213120.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_002213120.1;transl_table=11 NZ_CP008943.1 RefSeq gene 657938 658930 . + . ID=gene611;Name=DJ40_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03070;old_locus_tag=DJ40_622 NZ_CP008943.1 Protein Homology CDS 657938 658930 . + 0 ID=cds602;Parent=gene611;Dbxref=Genbank:WP_011192138.1;Name=WP_011192138.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_011192138.1;transl_table=11 NZ_CP008943.1 RefSeq gene 659054 659560 . + . ID=gene612;Name=DJ40_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03075;old_locus_tag=DJ40_623 NZ_CP008943.1 Protein Homology CDS 659054 659560 . + 0 ID=cds603;Parent=gene612;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11 NZ_CP008943.1 RefSeq gene 659580 660872 . + . ID=gene613;Name=DJ40_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03080;old_locus_tag=DJ40_624 NZ_CP008943.1 Protein Homology CDS 659580 660872 . + 0 ID=cds604;Parent=gene613;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11 NZ_CP008943.1 RefSeq gene 661130 661759 . + . ID=gene614;Name=DJ40_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03085;old_locus_tag=DJ40_625 NZ_CP008943.1 Protein Homology CDS 661130 661759 . + 0 ID=cds605;Parent=gene614;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 662175 662284 . + . ID=id39;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 662205 662280 . + . ID=gene615;Name=DJ40_RS03090;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS03090;old_locus_tag=DJ40_626 NZ_CP008943.1 tRNAscan-SE tRNA 662205 662280 . + . ID=rna9;Parent=gene615;anticodon=(pos:662238..662240);gbkey=tRNA;product=tRNA-Asn NZ_CP008943.1 tRNAscan-SE exon 662205 662280 . + . ID=id40;Parent=rna9;anticodon=(pos:662238..662240);gbkey=tRNA;product=tRNA-Asn NZ_CP008943.1 RefSeq gene 662627 663166 . - . ID=gene616;Name=DJ40_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03095;old_locus_tag=DJ40_627 NZ_CP008943.1 Protein Homology CDS 662627 663166 . - 0 ID=cds606;Parent=gene616;Dbxref=Genbank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211926.1;transl_table=11 NZ_CP008943.1 RefSeq gene 663256 663951 . - . ID=gene617;Name=DJ40_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03100;old_locus_tag=DJ40_628 NZ_CP008943.1 Protein Homology CDS 663256 663951 . - 0 ID=cds607;Parent=gene617;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NZ_CP008943.1 RefSeq gene 664528 665409 . + . ID=gene618;Name=DJ40_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03105;old_locus_tag=DJ40_629 NZ_CP008943.1 Protein Homology CDS 664528 665409 . + 0 ID=cds608;Parent=gene618;Dbxref=Genbank:WP_012105305.1;Name=WP_012105305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105305.1;transl_table=11 NZ_CP008943.1 RefSeq gene 665445 666785 . + . ID=gene619;Name=DJ40_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03110;old_locus_tag=DJ40_630 NZ_CP008943.1 Protein Homology CDS 665445 666785 . + 0 ID=cds609;Parent=gene619;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11 NZ_CP008943.1 RefSeq gene 666813 668210 . - . ID=gene620;Name=DJ40_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03115;old_locus_tag=DJ40_631 NZ_CP008943.1 Protein Homology CDS 666813 668210 . - 0 ID=cds610;Parent=gene620;Dbxref=Genbank:WP_002354070.1;Name=WP_002354070.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_002354070.1;transl_table=11 NZ_CP008943.1 RefSeq gene 668537 669904 . + . ID=gene621;Name=DJ40_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03120;old_locus_tag=DJ40_632 NZ_CP008943.1 Protein Homology CDS 668537 669904 . + 0 ID=cds611;Parent=gene621;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NZ_CP008943.1 RefSeq gene 670108 671253 . - . ID=gene622;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=DJ40_RS03125;old_locus_tag=DJ40_633 NZ_CP008943.1 Protein Homology CDS 670108 671253 . - 0 ID=cds612;Parent=gene622;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11 NZ_CP008943.1 RefSeq gene 671550 672827 . - . ID=gene623;Name=DJ40_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03130;old_locus_tag=DJ40_635 NZ_CP008943.1 Protein Homology CDS 671550 672827 . - 0 ID=cds613;Parent=gene623;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NZ_CP008943.1 RefSeq gene 672859 673701 . - . ID=gene624;Name=DJ40_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03135;old_locus_tag=DJ40_636 NZ_CP008943.1 Protein Homology CDS 672859 673701 . - 0 ID=cds614;Parent=gene624;Dbxref=Genbank:WP_011192131.1;Name=WP_011192131.1;gbkey=CDS;product=ureidoglycolate lyase;protein_id=WP_011192131.1;transl_table=11 NZ_CP008943.1 RefSeq gene 673749 674489 . - . ID=gene625;Name=DJ40_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03140;old_locus_tag=DJ40_637 NZ_CP008943.1 Protein Homology CDS 673749 674489 . - 0 ID=cds615;Parent=gene625;Dbxref=Genbank:WP_038399968.1;Name=WP_038399968.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_038399968.1;transl_table=11 NZ_CP008943.1 RefSeq gene 674936 675358 . + . ID=gene626;Name=DJ40_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03145;old_locus_tag=DJ40_638 NZ_CP008943.1 Protein Homology CDS 674936 675358 . + 0 ID=cds616;Parent=gene626;Dbxref=Genbank:WP_012105308.1;Name=WP_012105308.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_012105308.1;transl_table=11 NZ_CP008943.1 RefSeq gene 675367 676671 . - . ID=gene627;Name=DJ40_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03150;old_locus_tag=DJ40_639 NZ_CP008943.1 Protein Homology CDS 675367 676671 . - 0 ID=cds617;Parent=gene627;Dbxref=Genbank:WP_038399970.1;Name=WP_038399970.1;gbkey=CDS;product=MFS transporter;protein_id=WP_038399970.1;transl_table=11 NZ_CP008943.1 RefSeq gene 677864 680938 . + . ID=gene628;Name=DJ40_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03155;old_locus_tag=DJ40_640 NZ_CP008943.1 Protein Homology CDS 677864 680938 . + 0 ID=cds618;Parent=gene628;Dbxref=Genbank:WP_038401557.1;Name=WP_038401557.1;gbkey=CDS;product=adhesin;protein_id=WP_038401557.1;transl_table=11 NZ_CP008943.1 RefSeq gene 681082 681399 . - . ID=gene629;Name=DJ40_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03160;old_locus_tag=DJ40_641 NZ_CP008943.1 Protein Homology CDS 681082 681399 . - 0 ID=cds619;Parent=gene629;Dbxref=Genbank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217522.1;transl_table=11 NZ_CP008943.1 RefSeq gene 681833 682942 . - . ID=gene630;Name=DJ40_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03165;old_locus_tag=DJ40_642 NZ_CP008943.1 Protein Homology CDS 681833 682942 . - 0 ID=cds620;Parent=gene630;Dbxref=Genbank:WP_012304241.1;Name=WP_012304241.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_012304241.1;transl_table=11 NZ_CP008943.1 RefSeq gene 683235 684665 . + . ID=gene631;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=DJ40_RS03170;old_locus_tag=DJ40_643 NZ_CP008943.1 Protein Homology CDS 683235 684665 . + 0 ID=cds621;Parent=gene631;Dbxref=Genbank:WP_038399971.1;Name=WP_038399971.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_038399971.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 684700 686168 . + . ID=id41;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 686663 688054 . - . ID=gene632;Name=DJ40_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03175;old_locus_tag=DJ40_644 NZ_CP008943.1 Protein Homology CDS 686663 688054 . - 0 ID=cds622;Parent=gene632;Dbxref=Genbank:WP_011192126.1;Name=WP_011192126.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_011192126.1;transl_table=11 NZ_CP008943.1 RefSeq gene 688044 688259 . - . ID=gene633;Name=DJ40_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03180;old_locus_tag=DJ40_645 NZ_CP008943.1 Protein Homology CDS 688044 688259 . - 0 ID=cds623;Parent=gene633;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NZ_CP008943.1 RefSeq gene 688513 689604 . - . ID=gene634;Name=DJ40_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03185;old_locus_tag=DJ40_646 NZ_CP008943.1 Protein Homology CDS 688513 689604 . - 0 ID=cds624;Parent=gene634;Dbxref=Genbank:WP_038399972.1;Name=WP_038399972.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_038399972.1;transl_table=11 NZ_CP008943.1 RefSeq gene 689890 691431 . + . ID=gene635;Name=DJ40_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03190;old_locus_tag=DJ40_647 NZ_CP008943.1 Protein Homology CDS 689890 691431 . + 0 ID=cds625;Parent=gene635;Dbxref=Genbank:WP_038399973.1;Name=WP_038399973.1;gbkey=CDS;product=ABC transporter;protein_id=WP_038399973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 691428 692423 . + . ID=gene636;Name=DJ40_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03195;old_locus_tag=DJ40_648 NZ_CP008943.1 Protein Homology CDS 691428 692423 . + 0 ID=cds626;Parent=gene636;Dbxref=Genbank:WP_011192124.1;Name=WP_011192124.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011192124.1;transl_table=11 NZ_CP008943.1 RefSeq gene 692579 693115 . + . ID=gene637;Name=DJ40_RS21820;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS21820;old_locus_tag=DJ40_649 NZ_CP008943.1 RefSeq repeat_region 692601 692771 . + . ID=id42;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 692681 693115 . + . ID=gene638;Name=DJ40_RS03205;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS03205 NZ_CP008943.1 RefSeq gene 693270 694097 . - . ID=gene639;Name=DJ40_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03210;old_locus_tag=DJ40_650 NZ_CP008943.1 Protein Homology CDS 693270 694097 . - 0 ID=cds627;Parent=gene639;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11 NZ_CP008943.1 RefSeq gene 694819 695718 . + . ID=gene640;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=DJ40_RS03215;old_locus_tag=DJ40_651 NZ_CP008943.1 Protein Homology CDS 694819 695718 . + 0 ID=cds628;Parent=gene640;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NZ_CP008943.1 RefSeq gene 695722 697053 . + . ID=gene641;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=DJ40_RS03220;old_locus_tag=DJ40_652 NZ_CP008943.1 Protein Homology CDS 695722 697053 . + 0 ID=cds629;Parent=gene641;Dbxref=Genbank:WP_002211895.1;Name=WP_002211895.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NZ_CP008943.1 RefSeq gene 697056 698204 . + . ID=gene642;Name=DJ40_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03225;old_locus_tag=DJ40_653 NZ_CP008943.1 Protein Homology CDS 697056 698204 . + 0 ID=cds630;Parent=gene642;Dbxref=Genbank:WP_038399974.1;Name=WP_038399974.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_038399974.1;transl_table=11 NZ_CP008943.1 RefSeq gene 698201 699268 . + . ID=gene643;Name=DJ40_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03230;old_locus_tag=DJ40_654 NZ_CP008943.1 Protein Homology CDS 698201 699268 . + 0 ID=cds631;Parent=gene643;Dbxref=Genbank:WP_012105319.1;Name=WP_012105319.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=imidazoleglycerol-phosphate dehydratase;protein_id=WP_012105319.1;transl_table=11 NZ_CP008943.1 RefSeq gene 699268 699858 . + . ID=gene644;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=DJ40_RS03235;old_locus_tag=DJ40_655 NZ_CP008943.1 Protein Homology CDS 699268 699858 . + 0 ID=cds632;Parent=gene644;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NZ_CP008943.1 RefSeq gene 699864 700601 . + . ID=gene645;Name=DJ40_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03240;old_locus_tag=DJ40_656 NZ_CP008943.1 Protein Homology CDS 699864 700601 . + 0 ID=cds633;Parent=gene645;Dbxref=Genbank:WP_002211891.1;Name=WP_002211891.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NZ_CP008943.1 RefSeq gene 700583 701359 . + . ID=gene646;Name=DJ40_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03245;old_locus_tag=DJ40_657 NZ_CP008943.1 Protein Homology CDS 700583 701359 . + 0 ID=cds634;Parent=gene646;Dbxref=Genbank:WP_038399975.1;Name=WP_038399975.1;gbkey=CDS;product=imidazole glycerol phosphate synthase;protein_id=WP_038399975.1;transl_table=11 NZ_CP008943.1 RefSeq gene 701353 701967 . + . ID=gene647;Name=DJ40_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03250;old_locus_tag=DJ40_658 NZ_CP008943.1 Protein Homology CDS 701353 701967 . + 0 ID=cds635;Parent=gene647;Dbxref=Genbank:WP_012105321.1;Name=WP_012105321.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_012105321.1;transl_table=11 NZ_CP008943.1 RefSeq gene 702167 703576 . - . ID=gene648;Name=DJ40_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03255;old_locus_tag=DJ40_659 NZ_CP008943.1 Protein Homology CDS 702167 703576 . - 0 ID=cds636;Parent=gene648;Dbxref=Genbank:WP_002211888.1;Name=WP_002211888.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11 NZ_CP008943.1 RefSeq gene 703962 704855 . - . ID=gene649;Name=DJ40_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03260;old_locus_tag=DJ40_660 NZ_CP008943.1 Protein Homology CDS 703962 704855 . - 0 ID=cds637;Parent=gene649;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11 NZ_CP008943.1 RefSeq gene 704939 705829 . - . ID=gene650;Name=DJ40_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03265;old_locus_tag=DJ40_661 NZ_CP008943.1 Protein Homology CDS 704939 705829 . - 0 ID=cds638;Parent=gene650;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11 NZ_CP008943.1 RefSeq gene 706776 708590 . + . ID=gene651;Name=DJ40_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03270;old_locus_tag=DJ40_662 NZ_CP008943.1 Protein Homology CDS 706776 708590 . + 0 ID=cds639;Parent=gene651;Dbxref=Genbank:WP_024063295.1;Name=WP_024063295.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_024063295.1;transl_table=11 NZ_CP008943.1 RefSeq gene 708820 711081 . + . ID=gene652;Name=DJ40_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03275;old_locus_tag=DJ40_663 NZ_CP008943.1 Protein Homology CDS 708820 711081 . + 0 ID=cds640;Parent=gene652;Dbxref=Genbank:WP_032466252.1;Name=WP_032466252.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_032466252.1;transl_table=11 NZ_CP008943.1 RefSeq gene 711171 712250 . + . ID=gene653;Name=DJ40_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03280;old_locus_tag=DJ40_664 NZ_CP008943.1 Protein Homology CDS 711171 712250 . + 0 ID=cds641;Parent=gene653;Dbxref=Genbank:WP_011192116.1;Name=WP_011192116.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_011192116.1;transl_table=11 NZ_CP008943.1 RefSeq gene 712247 713287 . + . ID=gene654;Name=DJ40_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03285;old_locus_tag=DJ40_665 NZ_CP008943.1 Protein Homology CDS 712247 713287 . + 0 ID=cds642;Parent=gene654;Dbxref=Genbank:WP_011192115.1;Name=WP_011192115.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_011192115.1;transl_table=11 NZ_CP008943.1 RefSeq gene 713274 714314 . + . ID=gene655;Name=DJ40_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03290;old_locus_tag=DJ40_666 NZ_CP008943.1 Protein Homology CDS 713274 714314 . + 0 ID=cds643;Parent=gene655;Dbxref=Genbank:WP_002211880.1;Name=WP_002211880.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211880.1;transl_table=11 NZ_CP008943.1 RefSeq gene 714341 715159 . + . ID=gene656;Name=DJ40_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03295;old_locus_tag=DJ40_667 NZ_CP008943.1 Protein Homology CDS 714341 715159 . + 0 ID=cds644;Parent=gene656;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11 NZ_CP008943.1 RefSeq gene 715286 717130 . - . ID=gene657;Name=DJ40_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03300;old_locus_tag=DJ40_668 NZ_CP008943.1 Protein Homology CDS 715286 717130 . - 0 ID=cds645;Parent=gene657;Dbxref=Genbank:WP_038399976.1;Name=WP_038399976.1;gbkey=CDS;product=siderophore biosynthesis protein IucA;protein_id=WP_038399976.1;transl_table=11 NZ_CP008943.1 RefSeq gene 717127 717705 . - . ID=gene658;Name=DJ40_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03305;old_locus_tag=DJ40_669 NZ_CP008943.1 Protein Homology CDS 717127 717705 . - 0 ID=cds646;Parent=gene658;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11 NZ_CP008943.1 RefSeq gene 717705 719003 . - . ID=gene659;Name=DJ40_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03310;old_locus_tag=DJ40_670 NZ_CP008943.1 Protein Homology CDS 717705 719003 . - 0 ID=cds647;Parent=gene659;Dbxref=Genbank:WP_032466250.1;Name=WP_032466250.1;gbkey=CDS;product=alcaligin biosynthesis protein;protein_id=WP_032466250.1;transl_table=11 NZ_CP008943.1 RefSeq gene 719038 720585 . - . ID=gene660;Name=DJ40_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03315;old_locus_tag=DJ40_671 NZ_CP008943.1 Protein Homology CDS 719038 720585 . - 0 ID=cds648;Parent=gene660;Dbxref=Genbank:WP_011192113.1;Name=WP_011192113.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_011192113.1;transl_table=11 NZ_CP008943.1 RefSeq gene 720736 721515 . - . ID=gene661;Name=DJ40_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03320;old_locus_tag=DJ40_672 NZ_CP008943.1 Protein Homology CDS 720736 721515 . - 0 ID=cds649;Parent=gene661;Dbxref=Genbank:WP_012105329.1;Name=WP_012105329.1;gbkey=CDS;product=iron reductase;protein_id=WP_012105329.1;transl_table=11 NZ_CP008943.1 RefSeq gene 721957 723543 . + . ID=gene662;Name=DJ40_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03325;old_locus_tag=DJ40_673 NZ_CP008943.1 Protein Homology CDS 721957 723543 . + 0 ID=cds650;Parent=gene662;Dbxref=Genbank:WP_002211875.1;Name=WP_002211875.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211875.1;transl_table=11 NZ_CP008943.1 RefSeq gene 723675 725531 . - . ID=gene663;Name=DJ40_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03330;old_locus_tag=DJ40_674 NZ_CP008943.1 Protein Homology CDS 723675 725531 . - 0 ID=cds651;Parent=gene663;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NZ_CP008943.1 RefSeq gene 725718 726299 . - . ID=gene664;Name=DJ40_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03335;old_locus_tag=DJ40_675 NZ_CP008943.1 Protein Homology CDS 725718 726299 . - 0 ID=cds652;Parent=gene664;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11 NZ_CP008943.1 RefSeq gene 726404 727045 . - . ID=gene665;Name=DJ40_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03340;old_locus_tag=DJ40_676 NZ_CP008943.1 Protein Homology CDS 726404 727045 . - 0 ID=cds653;Parent=gene665;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NZ_CP008943.1 RefSeq gene 727290 728402 . - . ID=gene666;Name=DJ40_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03345;old_locus_tag=DJ40_677 NZ_CP008943.1 Protein Homology CDS 727290 728402 . - 0 ID=cds654;Parent=gene666;Dbxref=Genbank:WP_038399977.1;Name=WP_038399977.1;gbkey=CDS;product=antiporter;protein_id=WP_038399977.1;transl_table=11 NZ_CP008943.1 RefSeq gene 728667 730694 . + . ID=gene667;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=DJ40_RS03350;old_locus_tag=DJ40_678 NZ_CP008943.1 Protein Homology CDS 728667 730694 . + 0 ID=cds655;Parent=gene667;Dbxref=Genbank:WP_038399978.1;Name=WP_038399978.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_038399978.1;transl_table=11 NZ_CP008943.1 RefSeq gene 730823 731485 . - . ID=gene668;Name=DJ40_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03355;old_locus_tag=DJ40_679 NZ_CP008943.1 Protein Homology CDS 730823 731485 . - 0 ID=cds656;Parent=gene668;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11 NZ_CP008943.1 RefSeq gene 732187 733263 . + . ID=gene669;Name=DJ40_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03360;old_locus_tag=DJ40_680 NZ_CP008943.1 Protein Homology CDS 732187 733263 . + 0 ID=cds657;Parent=gene669;Dbxref=Genbank:WP_002211975.1;Name=WP_002211975.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002211975.1;transl_table=11 NZ_CP008943.1 RefSeq gene 733281 734534 . + . ID=gene670;Name=DJ40_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03365;old_locus_tag=DJ40_681 NZ_CP008943.1 Protein Homology CDS 733281 734534 . + 0 ID=cds658;Parent=gene670;Dbxref=Genbank:WP_011192108.1;Name=WP_011192108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192108.1;transl_table=11 NZ_CP008943.1 RefSeq gene 734866 736080 . + . ID=gene671;Name=DJ40_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03370;old_locus_tag=DJ40_682 NZ_CP008943.1 Protein Homology CDS 734866 736080 . + 0 ID=cds659;Parent=gene671;Dbxref=Genbank:WP_032466246.1;Name=WP_032466246.1;gbkey=CDS;product=MFS transporter;protein_id=WP_032466246.1;transl_table=11 NZ_CP008943.1 RefSeq gene 736322 736729 . + . ID=gene672;Name=DJ40_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03375;old_locus_tag=DJ40_683 NZ_CP008943.1 Protein Homology CDS 736322 736729 . + 0 ID=cds660;Parent=gene672;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 736726 737421 . + . ID=gene673;Name=DJ40_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03380;old_locus_tag=DJ40_684 NZ_CP008943.1 Protein Homology CDS 736726 737421 . + 0 ID=cds661;Parent=gene673;Dbxref=Genbank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211970.1;transl_table=11 NZ_CP008943.1 RefSeq gene 737747 738631 . + . ID=gene674;Name=DJ40_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03385;old_locus_tag=DJ40_685 NZ_CP008943.1 Protein Homology CDS 737747 738631 . + 0 ID=cds662;Parent=gene674;Dbxref=Genbank:WP_002211969.1;Name=WP_002211969.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NZ_CP008943.1 RefSeq gene 738987 740684 . + . ID=gene675;Name=DJ40_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03390;old_locus_tag=DJ40_686 NZ_CP008943.1 Protein Homology CDS 738987 740684 . + 0 ID=cds663;Parent=gene675;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NZ_CP008943.1 RefSeq gene 740965 741702 . + . ID=gene676;Name=DJ40_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03395;old_locus_tag=DJ40_687 NZ_CP008943.1 Protein Homology CDS 740965 741702 . + 0 ID=cds664;Parent=gene676;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 742143 743153 . - . ID=gene677;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=DJ40_RS03400;old_locus_tag=DJ40_688 NZ_CP008943.1 Protein Homology CDS 742143 743153 . - 0 ID=cds665;Parent=gene677;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11 NZ_CP008943.1 RefSeq gene 743174 744694 . - . ID=gene678;Name=DJ40_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03405;old_locus_tag=DJ40_689 NZ_CP008943.1 Protein Homology CDS 743174 744694 . - 0 ID=cds666;Parent=gene678;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NZ_CP008943.1 RefSeq gene 744924 745916 . - . ID=gene679;Name=DJ40_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03410;old_locus_tag=DJ40_690 NZ_CP008943.1 Protein Homology CDS 744924 745916 . - 0 ID=cds667;Parent=gene679;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 746664 747830 . - . ID=gene680;Name=DJ40_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03415;old_locus_tag=DJ40_691 NZ_CP008943.1 Protein Homology CDS 746664 747830 . - 0 ID=cds668;Parent=gene680;Dbxref=Genbank:WP_012304259.1;Name=WP_012304259.1;gbkey=CDS;product=membrane protein;protein_id=WP_012304259.1;transl_table=11 NZ_CP008943.1 RefSeq gene 747885 748547 . - . ID=gene681;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=DJ40_RS03420;old_locus_tag=DJ40_692 NZ_CP008943.1 Protein Homology CDS 747885 748547 . - 0 ID=cds669;Parent=gene681;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11 NZ_CP008943.1 RefSeq gene 748731 749882 . - . ID=gene682;Name=DJ40_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03425;old_locus_tag=DJ40_693 NZ_CP008943.1 Protein Homology CDS 748731 749882 . - 0 ID=cds670;Parent=gene682;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11 NZ_CP008943.1 RefSeq gene 750018 750887 . + . ID=gene683;Name=DJ40_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03430;old_locus_tag=DJ40_694 NZ_CP008943.1 Protein Homology CDS 750018 750887 . + 0 ID=cds671;Parent=gene683;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11 NZ_CP008943.1 RefSeq gene 751161 752300 . + . ID=gene684;Name=DJ40_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03435;old_locus_tag=DJ40_695 NZ_CP008943.1 Protein Homology CDS 751161 752300 . + 0 ID=cds672;Parent=gene684;Dbxref=Genbank:WP_002224699.1;Name=WP_002224699.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002224699.1;transl_table=11 NZ_CP008943.1 RefSeq gene 752321 753163 . + . ID=gene685;Name=DJ40_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03440;old_locus_tag=DJ40_696 NZ_CP008943.1 Protein Homology CDS 752321 753163 . + 0 ID=cds673;Parent=gene685;Dbxref=Genbank:WP_011192103.1;Name=WP_011192103.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_011192103.1;transl_table=11 NZ_CP008943.1 RefSeq gene 753432 753632 . + . ID=gene686;Name=DJ40_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03445;old_locus_tag=DJ40_697 NZ_CP008943.1 Protein Homology CDS 753432 753632 . + 0 ID=cds674;Parent=gene686;Dbxref=Genbank:WP_002211954.1;Name=WP_002211954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211954.1;transl_table=11 NZ_CP008943.1 RefSeq gene 753716 756076 . + . ID=gene687;Name=DJ40_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03450;old_locus_tag=DJ40_698 NZ_CP008943.1 Protein Homology CDS 753716 756076 . + 0 ID=cds675;Parent=gene687;Dbxref=Genbank:WP_038399980.1;Name=WP_038399980.1;gbkey=CDS;product=membrane protein;protein_id=WP_038399980.1;transl_table=11 NZ_CP008943.1 RefSeq gene 756078 757340 . + . ID=gene688;Name=DJ40_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03455;old_locus_tag=DJ40_699 NZ_CP008943.1 Protein Homology CDS 756078 757340 . + 0 ID=cds676;Parent=gene688;Dbxref=Genbank:WP_011192101.1;Name=WP_011192101.1;gbkey=CDS;product=RND transporter;protein_id=WP_011192101.1;transl_table=11 NZ_CP008943.1 RefSeq gene 757342 758010 . + . ID=gene689;Name=DJ40_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03460;old_locus_tag=DJ40_700 NZ_CP008943.1 Protein Homology CDS 757342 758010 . + 0 ID=cds677;Parent=gene689;Dbxref=Genbank:WP_011192100.1;Name=WP_011192100.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_011192100.1;transl_table=11 NZ_CP008943.1 RefSeq gene 758020 759330 . + . ID=gene690;Name=DJ40_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03465;old_locus_tag=DJ40_701 NZ_CP008943.1 Protein Homology CDS 758020 759330 . + 0 ID=cds678;Parent=gene690;Dbxref=Genbank:WP_032466245.1;Name=WP_032466245.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_032466245.1;transl_table=11 NZ_CP008943.1 RefSeq gene 759865 761139 . + . ID=gene691;Name=DJ40_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03470;old_locus_tag=DJ40_702 NZ_CP008943.1 Protein Homology CDS 759865 761139 . + 0 ID=cds679;Parent=gene691;Dbxref=Genbank:WP_012105337.1;Name=WP_012105337.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_012105337.1;transl_table=11 NZ_CP008943.1 RefSeq gene 761141 761911 . + . ID=gene692;Name=DJ40_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03475;old_locus_tag=DJ40_703 NZ_CP008943.1 Protein Homology CDS 761141 761911 . + 0 ID=cds680;Parent=gene692;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11 NZ_CP008943.1 RefSeq gene 761983 762630 . - . ID=gene693;Name=DJ40_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03480;old_locus_tag=DJ40_704 NZ_CP008943.1 Protein Homology CDS 761983 762630 . - 0 ID=cds681;Parent=gene693;Dbxref=Genbank:WP_012105338.1;Name=WP_012105338.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105338.1;transl_table=11 NZ_CP008943.1 RefSeq gene 762858 764429 . - . ID=gene694;Name=DJ40_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03485;old_locus_tag=DJ40_705 NZ_CP008943.1 Protein Homology CDS 762858 764429 . - 0 ID=cds682;Parent=gene694;Dbxref=Genbank:WP_002354043.1;Name=WP_002354043.1;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_002354043.1;transl_table=11 NZ_CP008943.1 RefSeq gene 765137 765760 . + . ID=gene695;Name=DJ40_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03490;old_locus_tag=DJ40_706 NZ_CP008943.1 Protein Homology CDS 765137 765760 . + 0 ID=cds683;Parent=gene695;Dbxref=Genbank:WP_038399982.1;Name=WP_038399982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399982.1;transl_table=11 NZ_CP008943.1 RefSeq gene 765972 767339 . - . ID=gene696;Name=DJ40_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03495;old_locus_tag=DJ40_707 NZ_CP008943.1 Protein Homology CDS 765972 767339 . - 0 ID=cds684;Parent=gene696;Dbxref=Genbank:WP_038399983.1;Name=WP_038399983.1;gbkey=CDS;product=membrane protein;protein_id=WP_038399983.1;transl_table=11 NZ_CP008943.1 RefSeq gene 767364 767816 . - . ID=gene697;Name=DJ40_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03500;old_locus_tag=DJ40_708 NZ_CP008943.1 Protein Homology CDS 767364 767816 . - 0 ID=cds685;Parent=gene697;Dbxref=Genbank:WP_002211943.1;Name=WP_002211943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211943.1;transl_table=11 NZ_CP008943.1 RefSeq gene 767816 768439 . - . ID=gene698;Name=DJ40_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21825;old_locus_tag=DJ40_709 NZ_CP008943.1 Protein Homology CDS 767816 768439 . - 0 ID=cds686;Parent=gene698;Dbxref=Genbank:WP_042592563.1;Name=WP_042592563.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_042592563.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 768370 771227 . + . ID=id43;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 768414 769499 . - . ID=gene699;Name=DJ40_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03510;old_locus_tag=DJ40_710 NZ_CP008943.1 Protein Homology CDS 768414 769499 . - 0 ID=cds687;Parent=gene699;Dbxref=Genbank:WP_002211941.1;Name=WP_002211941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211941.1;transl_table=11 NZ_CP008943.1 RefSeq gene 769463 771226 . - . ID=gene700;Name=DJ40_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03515;old_locus_tag=DJ40_711 NZ_CP008943.1 Protein Homology CDS 769463 771226 . - 0 ID=cds688;Parent=gene700;Dbxref=Genbank:WP_038399984.1;Name=WP_038399984.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_038399984.1;transl_table=11 NZ_CP008943.1 RefSeq gene 771318 771776 . - . ID=gene701;Name=DJ40_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03520;old_locus_tag=DJ40_712 NZ_CP008943.1 Protein Homology CDS 771318 771776 . - 0 ID=cds689;Parent=gene701;Dbxref=Genbank:WP_038399985.1;Name=WP_038399985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399985.1;transl_table=11 NZ_CP008943.1 RefSeq gene 771779 772612 . - . ID=gene702;Name=DJ40_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03525 NZ_CP008943.1 Protein Homology CDS 771779 772612 . - 0 ID=cds690;Parent=gene702;Dbxref=Genbank:WP_049862806.1;Name=WP_049862806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862806.1;transl_table=11 NZ_CP008943.1 RefSeq gene 772912 774513 . - . ID=gene703;Name=DJ40_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03530;old_locus_tag=DJ40_714 NZ_CP008943.1 Protein Homology CDS 772912 774513 . - 0 ID=cds691;Parent=gene703;Dbxref=Genbank:WP_038399987.1;Name=WP_038399987.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038399987.1;transl_table=11 NZ_CP008943.1 RefSeq gene 774557 777979 . - . ID=gene704;Name=DJ40_RS03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03535;pseudo=true NZ_CP008943.1 Protein Homology CDS 774557 777979 . - 0 ID=cds692;Parent=gene704;gbkey=CDS;product=type VI secretion protein VasK;pseudo=true;transl_except=(pos:complement(776936..776938)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 777976 779208 . - . ID=gene705;Name=DJ40_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03540;old_locus_tag=DJ40_717 NZ_CP008943.1 Protein Homology CDS 777976 779208 . - 0 ID=cds693;Parent=gene705;Dbxref=Genbank:WP_038399988.1;Name=WP_038399988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038399988.1;transl_table=11 NZ_CP008943.1 RefSeq gene 779988 780499 . - . ID=gene706;Name=DJ40_RS03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03545;pseudo=true NZ_CP008943.1 Protein Homology CDS 779988 780499 . - 0 ID=cds694;Parent=gene706;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 780504 782251 . - . ID=gene707;Name=DJ40_RS03550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03550;pseudo=true NZ_CP008943.1 Protein Homology CDS 780504 782251 . - 0 ID=cds695;Parent=gene707;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptidoglycan-binding protein LysM;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 782260 782676 . - . ID=gene708;Name=DJ40_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03555;old_locus_tag=DJ40_721 NZ_CP008943.1 Protein Homology CDS 782260 782676 . - 0 ID=cds696;Parent=gene708;Dbxref=Genbank:WP_011192084.1;Name=WP_011192084.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192084.1;transl_table=11 NZ_CP008943.1 RefSeq gene 782679 785381 . - . ID=gene709;Name=DJ40_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03560;old_locus_tag=DJ40_722 NZ_CP008943.1 Protein Homology CDS 782679 785381 . - 0 ID=cds697;Parent=gene709;Dbxref=Genbank:WP_038399990.1;Name=WP_038399990.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038399990.1;transl_table=11 NZ_CP008943.1 RefSeq gene 785697 786092 . - . ID=gene710;Name=DJ40_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03565;old_locus_tag=DJ40_723 NZ_CP008943.1 Protein Homology CDS 785697 786092 . - 0 ID=cds698;Parent=gene710;Dbxref=Genbank:WP_032467135.1;Name=WP_032467135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467135.1;transl_table=11 NZ_CP008943.1 RefSeq gene 786096 787367 . - . ID=gene711;Name=DJ40_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03570;old_locus_tag=DJ40_724 NZ_CP008943.1 Protein Homology CDS 786096 787367 . - 0 ID=cds699;Parent=gene711;Dbxref=Genbank:WP_011192081.1;Name=WP_011192081.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192081.1;transl_table=11 NZ_CP008943.1 RefSeq gene 787485 787895 . - . ID=gene712;Name=DJ40_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21830;old_locus_tag=DJ40_725 NZ_CP008943.1 Protein Homology CDS 787485 787895 . - 0 ID=cds700;Parent=gene712;Dbxref=Genbank:WP_042592565.1;Name=WP_042592565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592565.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 787711 787872 . + . ID=id44;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 788049 788822 . - . ID=gene713;Name=DJ40_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03580;old_locus_tag=DJ40_726 NZ_CP008943.1 Protein Homology CDS 788049 788822 . - 0 ID=cds701;Parent=gene713;Dbxref=Genbank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 788819 791118 . - . ID=gene714;Name=DJ40_RS03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03585;pseudo=true NZ_CP008943.1 Protein Homology CDS 788819 791118 . - 0 ID=cds702;Parent=gene714;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 789653 793485 . + . ID=id45;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 791134 793481 . - . ID=gene715;Name=DJ40_RS03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03590;old_locus_tag=DJ40_729;pseudo=true NZ_CP008943.1 Protein Homology CDS 791134 793481 . - 0 ID=cds703;Parent=gene715;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 793484 796126 . - . ID=gene716;Name=DJ40_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03595;old_locus_tag=DJ40_730 NZ_CP008943.1 Protein Homology CDS 793484 796126 . - 0 ID=cds704;Parent=gene716;Dbxref=Genbank:WP_038399992.1;Name=WP_038399992.1;gbkey=CDS;product=ATPase;protein_id=WP_038399992.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 793519 797332 . + . ID=id46;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 796515 797005 . - . ID=gene717;Name=DJ40_RS03600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03600;pseudo=true NZ_CP008943.1 Protein Homology CDS 796515 797005 . - 0 ID=cds705;Parent=gene717;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Hcp family T6SS protein CtsH1;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 797009 798745 . - . ID=gene718;Name=DJ40_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03605;old_locus_tag=DJ40_733 NZ_CP008943.1 Protein Homology CDS 797009 798745 . - 0 ID=cds706;Parent=gene718;Dbxref=Genbank:WP_038399993.1;Name=WP_038399993.1;gbkey=CDS;product=membrane protein;protein_id=WP_038399993.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 797933 802998 . + . ID=id47;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 798745 799431 . - . ID=gene719;Name=DJ40_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03610;old_locus_tag=DJ40_734 NZ_CP008943.1 Protein Homology CDS 798745 799431 . - 0 ID=cds707;Parent=gene719;Dbxref=Genbank:WP_038399995.1;Name=WP_038399995.1;gbkey=CDS;product=type VI secretion protein ImpK;protein_id=WP_038399995.1;transl_table=11 NZ_CP008943.1 RefSeq gene 799428 800780 . - . ID=gene720;Name=DJ40_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03615;old_locus_tag=DJ40_735 NZ_CP008943.1 Protein Homology CDS 799428 800780 . - 0 ID=cds708;Parent=gene720;Dbxref=Genbank:WP_038399996.1;Name=WP_038399996.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038399996.1;transl_table=11 NZ_CP008943.1 RefSeq gene 800792 802343 . - . ID=gene721;Name=DJ40_RS03620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03620;old_locus_tag=DJ40_737;pseudo=true NZ_CP008943.1 Protein Homology CDS 800792 802343 . - 0 ID=cds709;Parent=gene721;exception=annotated by transcript or proteomic data;gbkey=CDS;product=EvpB family type VI secretion protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 802386 802886 . - . ID=gene722;Name=DJ40_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03625;old_locus_tag=DJ40_738 NZ_CP008943.1 Protein Homology CDS 802386 802886 . - 0 ID=cds710;Parent=gene722;Dbxref=Genbank:WP_002213014.1;Name=WP_002213014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213014.1;transl_table=11 NZ_CP008943.1 RefSeq gene 803549 803716 . - . ID=gene723;Name=DJ40_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03630 NZ_CP008943.1 Protein Homology CDS 803549 803716 . - 0 ID=cds711;Parent=gene723;Dbxref=Genbank:WP_002214708.1;Name=WP_002214708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214708.1;transl_table=11 NZ_CP008943.1 RefSeq gene 803873 804721 . - . ID=gene724;Name=DJ40_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03635;old_locus_tag=DJ40_740 NZ_CP008943.1 Protein Homology CDS 803873 804721 . - 0 ID=cds712;Parent=gene724;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 804820 805068 . - . ID=gene725;Name=DJ40_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03640;old_locus_tag=DJ40_741 NZ_CP008943.1 Protein Homology CDS 804820 805068 . - 0 ID=cds713;Parent=gene725;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11 NZ_CP008943.1 RefSeq gene 805106 805438 . - . ID=gene726;Name=DJ40_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03645;old_locus_tag=DJ40_742 NZ_CP008943.1 Protein Homology CDS 805106 805438 . - 0 ID=cds714;Parent=gene726;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 805633 806421 . - . ID=gene727;Name=DJ40_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03650;old_locus_tag=DJ40_743 NZ_CP008943.1 Protein Homology CDS 805633 806421 . - 0 ID=cds715;Parent=gene727;Dbxref=Genbank:WP_002213024.1;Name=WP_002213024.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002213024.1;transl_table=11 NZ_CP008943.1 RefSeq gene 806424 807176 . - . ID=gene728;Name=DJ40_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03655;old_locus_tag=DJ40_744 NZ_CP008943.1 Protein Homology CDS 806424 807176 . - 0 ID=cds716;Parent=gene728;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11 NZ_CP008943.1 RefSeq gene 807178 807897 . - . ID=gene729;Name=DJ40_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03660;old_locus_tag=DJ40_745 NZ_CP008943.1 Protein Homology CDS 807178 807897 . - 0 ID=cds717;Parent=gene729;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11 NZ_CP008943.1 RefSeq gene 807890 809128 . - . ID=gene730;Name=DJ40_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03665;old_locus_tag=DJ40_746 NZ_CP008943.1 Protein Homology CDS 807890 809128 . - 0 ID=cds718;Parent=gene730;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11 NZ_CP008943.1 RefSeq gene 809144 809881 . - . ID=gene731;Name=DJ40_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03670;old_locus_tag=DJ40_747 NZ_CP008943.1 Protein Homology CDS 809144 809881 . - 0 ID=cds719;Parent=gene731;Dbxref=Genbank:WP_012105362.1;Name=WP_012105362.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_012105362.1;transl_table=11 NZ_CP008943.1 RefSeq gene 809883 811166 . - . ID=gene732;Name=DJ40_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03675;old_locus_tag=DJ40_748 NZ_CP008943.1 Protein Homology CDS 809883 811166 . - 0 ID=cds720;Parent=gene732;Dbxref=Genbank:WP_012105363.1;Name=WP_012105363.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_012105363.1;transl_table=11 NZ_CP008943.1 RefSeq gene 811156 811680 . - . ID=gene733;Name=DJ40_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03680;old_locus_tag=DJ40_749 NZ_CP008943.1 Protein Homology CDS 811156 811680 . - 0 ID=cds721;Parent=gene733;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11 NZ_CP008943.1 RefSeq gene 811944 812162 . - . ID=gene734;Name=DJ40_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03685 NZ_CP008943.1 Protein Homology CDS 811944 812162 . - 0 ID=cds722;Parent=gene734;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NZ_CP008943.1 RefSeq gene 812893 813639 . + . ID=gene735;Name=DJ40_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03690;old_locus_tag=DJ40_751 NZ_CP008943.1 Protein Homology CDS 812893 813639 . + 0 ID=cds723;Parent=gene735;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11 NZ_CP008943.1 RefSeq gene 813793 816210 . + . ID=gene736;Name=DJ40_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03695;old_locus_tag=DJ40_752 NZ_CP008943.1 Protein Homology CDS 813793 816210 . + 0 ID=cds724;Parent=gene736;Dbxref=Genbank:WP_038399998.1;Name=WP_038399998.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_038399998.1;transl_table=11 NZ_CP008943.1 RefSeq gene 816644 817795 . - . ID=gene737;Name=DJ40_RS03700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03700;pseudo=true NZ_CP008943.1 Protein Homology CDS 816644 817795 . - 0 ID=cds725;Parent=gene737;gbkey=CDS;product=cytotoxic necrotizing factor;pseudo=true;transl_except=(pos:complement(817613..817615)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 817810 818061 . - . ID=gene738;Name=DJ40_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03705;old_locus_tag=DJ40_755 NZ_CP008943.1 Protein Homology CDS 817810 818061 . - 0 ID=cds726;Parent=gene738;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11 NZ_CP008943.1 RefSeq gene 818095 818451 . - . ID=gene739;Name=DJ40_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03710;old_locus_tag=DJ40_756 NZ_CP008943.1 Protein Homology CDS 818095 818451 . - 0 ID=cds727;Parent=gene739;Dbxref=Genbank:WP_038400000.1;Name=WP_038400000.1;gbkey=CDS;product=cytotoxic necrotizing factor;protein_id=WP_038400000.1;transl_table=11 NZ_CP008943.1 RefSeq gene 818822 819109 . - . ID=gene740;Name=DJ40_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03715;old_locus_tag=DJ40_757 NZ_CP008943.1 Protein Homology CDS 818822 819109 . - 0 ID=cds728;Parent=gene740;Dbxref=Genbank:WP_012304287.1;Name=WP_012304287.1;gbkey=CDS;product=integrase;protein_id=WP_012304287.1;transl_table=11 NZ_CP008943.1 RefSeq gene 819543 819630 . - . ID=gene741;Name=DJ40_RS03720;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS03720;old_locus_tag=DJ40_758 NZ_CP008943.1 tRNAscan-SE tRNA 819543 819630 . - . ID=rna10;Parent=gene741;anticodon=(pos:complement(819594..819596));gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 tRNAscan-SE exon 819543 819630 . - . ID=id48;Parent=rna10;anticodon=(pos:complement(819594..819596));gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 RefSeq gene 819871 820200 . + . ID=gene742;Name=DJ40_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03725;old_locus_tag=DJ40_759 NZ_CP008943.1 Protein Homology CDS 819871 820200 . + 0 ID=cds729;Parent=gene742;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NZ_CP008943.1 RefSeq gene 820252 820530 . - . ID=gene743;Name=DJ40_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03730;old_locus_tag=DJ40_760 NZ_CP008943.1 Protein Homology CDS 820252 820530 . - 0 ID=cds730;Parent=gene743;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NZ_CP008943.1 RefSeq gene 820624 821814 . + . ID=gene744;Name=DJ40_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03735;old_locus_tag=DJ40_761 NZ_CP008943.1 Protein Homology CDS 820624 821814 . + 0 ID=cds731;Parent=gene744;Dbxref=Genbank:WP_002213052.1;Name=WP_002213052.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_002213052.1;transl_table=11 NZ_CP008943.1 RefSeq gene 821875 822192 . + . ID=gene745;Name=DJ40_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03740;old_locus_tag=DJ40_762 NZ_CP008943.1 Protein Homology CDS 821875 822192 . + 0 ID=cds732;Parent=gene745;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NZ_CP008943.1 RefSeq gene 822301 822717 . - . ID=gene746;Name=DJ40_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03745;old_locus_tag=DJ40_763 NZ_CP008943.1 Protein Homology CDS 822301 822717 . - 0 ID=cds733;Parent=gene746;Dbxref=Genbank:WP_002213056.1;Name=WP_002213056.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213056.1;transl_table=11 NZ_CP008943.1 RefSeq gene 823033 823713 . + . ID=gene747;Name=DJ40_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03750;old_locus_tag=DJ40_764 NZ_CP008943.1 Protein Homology CDS 823033 823713 . + 0 ID=cds734;Parent=gene747;Dbxref=Genbank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213058.1;transl_table=11 NZ_CP008943.1 RefSeq gene 823892 824356 . + . ID=gene748;Name=DJ40_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03755;old_locus_tag=DJ40_765 NZ_CP008943.1 Protein Homology CDS 823892 824356 . + 0 ID=cds735;Parent=gene748;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NZ_CP008943.1 RefSeq gene 824417 826471 . - . ID=gene749;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=DJ40_RS03760;old_locus_tag=DJ40_766 NZ_CP008943.1 Protein Homology CDS 824417 826471 . - 0 ID=cds736;Parent=gene749;Dbxref=Genbank:WP_011192072.1;Name=WP_011192072.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_011192072.1;transl_table=11 NZ_CP008943.1 RefSeq gene 826665 827111 . + . ID=gene750;Name=DJ40_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03765;old_locus_tag=DJ40_767 NZ_CP008943.1 Protein Homology CDS 826665 827111 . + 0 ID=cds737;Parent=gene750;Dbxref=Genbank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213062.1;transl_table=11 NZ_CP008943.1 RefSeq gene 827141 829279 . + . ID=gene751;Name=DJ40_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03770;old_locus_tag=DJ40_768 NZ_CP008943.1 Protein Homology CDS 827141 829279 . + 0 ID=cds738;Parent=gene751;Dbxref=Genbank:WP_038400002.1;Name=WP_038400002.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400002.1;transl_table=11 NZ_CP008943.1 RefSeq gene 829381 830016 . - . ID=gene752;Name=DJ40_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03775;old_locus_tag=DJ40_769 NZ_CP008943.1 Protein Homology CDS 829381 830016 . - 0 ID=cds739;Parent=gene752;Dbxref=Genbank:WP_038400003.1;Name=WP_038400003.1;gbkey=CDS;product=DNA transformation protein tfoX;protein_id=WP_038400003.1;transl_table=11 NZ_CP008943.1 RefSeq gene 830245 830751 . + . ID=gene753;Name=DJ40_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03780;old_locus_tag=DJ40_770 NZ_CP008943.1 Protein Homology CDS 830245 830751 . + 0 ID=cds740;Parent=gene753;Dbxref=Genbank:WP_038400005.1;Name=WP_038400005.1;gbkey=CDS;product=cell division protein;protein_id=WP_038400005.1;transl_table=11 NZ_CP008943.1 RefSeq gene 831109 832170 . + . ID=gene754;Name=DJ40_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03785;old_locus_tag=DJ40_771 NZ_CP008943.1 Protein Homology CDS 831109 832170 . + 0 ID=cds741;Parent=gene754;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11 NZ_CP008943.1 RefSeq gene 832276 832731 . - . ID=gene755;Name=DJ40_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03790;old_locus_tag=DJ40_772 NZ_CP008943.1 Protein Homology CDS 832276 832731 . - 0 ID=cds742;Parent=gene755;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11 NZ_CP008943.1 RefSeq gene 832942 834693 . + . ID=gene756;Name=DJ40_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03795;old_locus_tag=DJ40_773 NZ_CP008943.1 Protein Homology CDS 832942 834693 . + 0 ID=cds743;Parent=gene756;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11 NZ_CP008943.1 RefSeq gene 834762 835280 . + . ID=gene757;Name=DJ40_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03800;old_locus_tag=DJ40_774 NZ_CP008943.1 Protein Homology CDS 834762 835280 . + 0 ID=cds744;Parent=gene757;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11 NZ_CP008943.1 RefSeq gene 835546 835734 . - . ID=gene758;Name=DJ40_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03805;old_locus_tag=DJ40_775 NZ_CP008943.1 Protein Homology CDS 835546 835734 . - 0 ID=cds745;Parent=gene758;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11 NZ_CP008943.1 RefSeq gene 835980 837254 . + . ID=gene759;Name=DJ40_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03810;old_locus_tag=DJ40_776 NZ_CP008943.1 Protein Homology CDS 835980 837254 . + 0 ID=cds746;Parent=gene759;Dbxref=Genbank:WP_011192068.1;Name=WP_011192068.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_011192068.1;transl_table=11 NZ_CP008943.1 RefSeq gene 837316 837483 . - . ID=gene760;Name=DJ40_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03815 NZ_CP008943.1 Protein Homology CDS 837316 837483 . - 0 ID=cds747;Parent=gene760;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NZ_CP008943.1 RefSeq gene 837564 837704 . - . ID=gene761;Name=DJ40_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03820 NZ_CP008943.1 Protein Homology CDS 837564 837704 . - 0 ID=cds748;Parent=gene761;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11 NZ_CP008943.1 RefSeq gene 837753 838331 . - . ID=gene762;Name=DJ40_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03825;old_locus_tag=DJ40_777 NZ_CP008943.1 Protein Homology CDS 837753 838331 . - 0 ID=cds749;Parent=gene762;Dbxref=Genbank:WP_002211289.1;Name=WP_002211289.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211289.1;transl_table=11 NZ_CP008943.1 RefSeq gene 838328 839980 . - . ID=gene763;Name=DJ40_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03830;old_locus_tag=DJ40_778 NZ_CP008943.1 Protein Homology CDS 838328 839980 . - 0 ID=cds750;Parent=gene763;Dbxref=Genbank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_002211290.1;transl_table=11 NZ_CP008943.1 RefSeq gene 839967 841184 . - . ID=gene764;Name=DJ40_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03835;old_locus_tag=DJ40_779 NZ_CP008943.1 Protein Homology CDS 839967 841184 . - 0 ID=cds751;Parent=gene764;Dbxref=Genbank:WP_002354008.1;Name=WP_002354008.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_002354008.1;transl_table=11 NZ_CP008943.1 RefSeq gene 841382 843295 . - . ID=gene765;Name=DJ40_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03840;old_locus_tag=DJ40_780 NZ_CP008943.1 Protein Homology CDS 841382 843295 . - 0 ID=cds752;Parent=gene765;Dbxref=Genbank:WP_012105373.1;Name=WP_012105373.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_012105373.1;transl_table=11 NZ_CP008943.1 RefSeq gene 843301 845421 . - . ID=gene766;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=DJ40_RS03845;old_locus_tag=DJ40_781 NZ_CP008943.1 Protein Homology CDS 843301 845421 . - 0 ID=cds753;Parent=gene766;Dbxref=Genbank:WP_038400007.1;Name=WP_038400007.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=23S rRNA methyltransferase;protein_id=WP_038400007.1;transl_table=11 NZ_CP008943.1 RefSeq gene 845524 846633 . + . ID=gene767;Name=DJ40_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03850;old_locus_tag=DJ40_782 NZ_CP008943.1 Protein Homology CDS 845524 846633 . + 0 ID=cds754;Parent=gene767;Dbxref=Genbank:WP_038401568.1;Name=WP_038401568.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401568.1;transl_table=11 NZ_CP008943.1 RefSeq gene 846659 847210 . - . ID=gene768;Name=DJ40_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03855;old_locus_tag=DJ40_783 NZ_CP008943.1 Protein Homology CDS 846659 847210 . - 0 ID=cds755;Parent=gene768;Dbxref=Genbank:WP_011192064.1;Name=WP_011192064.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_011192064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 847393 848403 . - . ID=gene769;Name=DJ40_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03860;old_locus_tag=DJ40_784 NZ_CP008943.1 Protein Homology CDS 847393 848403 . - 0 ID=cds756;Parent=gene769;Dbxref=Genbank:WP_038400008.1;Name=WP_038400008.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_038400008.1;transl_table=11 NZ_CP008943.1 RefSeq gene 849039 851654 . - . ID=gene770;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=DJ40_RS03865;old_locus_tag=DJ40_785 NZ_CP008943.1 Protein Homology CDS 849039 851654 . - 0 ID=cds757;Parent=gene770;Dbxref=Genbank:WP_012413610.1;Name=WP_012413610.1;gbkey=CDS;gene=pepN;product=aminopeptidase N;protein_id=WP_012413610.1;transl_table=11 NZ_CP008943.1 RefSeq gene 852351 853556 . + . ID=gene771;Name=DJ40_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03870;old_locus_tag=DJ40_786 NZ_CP008943.1 Protein Homology CDS 852351 853556 . + 0 ID=cds758;Parent=gene771;Dbxref=Genbank:WP_038400009.1;Name=WP_038400009.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_038400009.1;transl_table=11 NZ_CP008943.1 RefSeq gene 854070 855470 . + . ID=gene772;Name=DJ40_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03875;old_locus_tag=DJ40_787 NZ_CP008943.1 Protein Homology CDS 854070 855470 . + 0 ID=cds759;Parent=gene772;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NZ_CP008943.1 RefSeq gene 855768 856850 . + . ID=gene773;Name=DJ40_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03880;old_locus_tag=DJ40_788 NZ_CP008943.1 Protein Homology CDS 855768 856850 . + 0 ID=cds760;Parent=gene773;Dbxref=Genbank:WP_038400010.1;Name=WP_038400010.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_038400010.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 856891 857605 . + . ID=id49;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 857000 857456 . - . ID=gene774;Name=DJ40_RS03885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03885;pseudo=true NZ_CP008943.1 Protein Homology CDS 857000 857456 . - 0 ID=cds761;Parent=gene774;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 857816 859006 . + . ID=gene775;Name=DJ40_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03890;old_locus_tag=DJ40_791 NZ_CP008943.1 Protein Homology CDS 857816 859006 . + 0 ID=cds762;Parent=gene775;Dbxref=Genbank:WP_012304295.1;Name=WP_012304295.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_012304295.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 859060 859231 . + . ID=id50;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 859430 860077 . - . ID=gene776;Name=DJ40_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03895;old_locus_tag=DJ40_792 NZ_CP008943.1 Protein Homology CDS 859430 860077 . - 0 ID=cds763;Parent=gene776;Dbxref=Genbank:WP_011192061.1;Name=WP_011192061.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192061.1;transl_table=11 NZ_CP008943.1 RefSeq gene 860138 860686 . - . ID=gene777;Name=DJ40_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03900;old_locus_tag=DJ40_793 NZ_CP008943.1 Protein Homology CDS 860138 860686 . - 0 ID=cds764;Parent=gene777;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11 NZ_CP008943.1 RefSeq gene 860910 862766 . - . ID=gene778;Name=DJ40_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03905;old_locus_tag=DJ40_794 NZ_CP008943.1 Protein Homology CDS 860910 862766 . - 0 ID=cds765;Parent=gene778;Dbxref=Genbank:WP_002217987.1;Name=WP_002217987.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002217987.1;transl_table=11 NZ_CP008943.1 RefSeq gene 863014 867471 . - . ID=gene779;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=DJ40_RS03910;old_locus_tag=DJ40_795 NZ_CP008943.1 Protein Homology CDS 863014 867471 . - 0 ID=cds766;Parent=gene779;Dbxref=Genbank:WP_012413608.1;Name=WP_012413608.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_012413608.1;transl_table=11 NZ_CP008943.1 RefSeq gene 867468 868196 . - . ID=gene780;Name=DJ40_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03915;old_locus_tag=DJ40_796 NZ_CP008943.1 Protein Homology CDS 867468 868196 . - 0 ID=cds767;Parent=gene780;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11 NZ_CP008943.1 RefSeq gene 868177 869499 . - . ID=gene781;Name=DJ40_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03920;old_locus_tag=DJ40_797 NZ_CP008943.1 Protein Homology CDS 868177 869499 . - 0 ID=cds768;Parent=gene781;Dbxref=Genbank:WP_038400012.1;Name=WP_038400012.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit F;protein_id=WP_038400012.1;transl_table=11 NZ_CP008943.1 RefSeq gene 869496 870281 . - . ID=gene782;Name=DJ40_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03925;old_locus_tag=DJ40_798 NZ_CP008943.1 Protein Homology CDS 869496 870281 . - 0 ID=cds769;Parent=gene782;Dbxref=Genbank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_002211311.1;transl_table=11 NZ_CP008943.1 RefSeq gene 870527 870679 . + . ID=gene783;Name=DJ40_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03930 NZ_CP008943.1 Protein Homology CDS 870527 870679 . + 0 ID=cds770;Parent=gene783;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11 NZ_CP008943.1 RefSeq gene 871091 871984 . - . ID=gene784;Name=DJ40_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03935;old_locus_tag=DJ40_799 NZ_CP008943.1 Protein Homology CDS 871091 871984 . - 0 ID=cds771;Parent=gene784;Dbxref=Genbank:WP_038400014.1;Name=WP_038400014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400014.1;transl_table=11 NZ_CP008943.1 RefSeq gene 872347 873099 . - . ID=gene785;Name=DJ40_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03940;old_locus_tag=DJ40_800 NZ_CP008943.1 Protein Homology CDS 872347 873099 . - 0 ID=cds772;Parent=gene785;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NZ_CP008943.1 RefSeq gene 873096 873278 . - . ID=gene786;Name=DJ40_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03945;old_locus_tag=DJ40_801 NZ_CP008943.1 Protein Homology CDS 873096 873278 . - 0 ID=cds773;Parent=gene786;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11 NZ_CP008943.1 RefSeq gene 873826 874035 . - . ID=gene787;Name=DJ40_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03950;old_locus_tag=DJ40_802 NZ_CP008943.1 Protein Homology CDS 873826 874035 . - 0 ID=cds774;Parent=gene787;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NZ_CP008943.1 RefSeq gene 874273 874470 . + . ID=gene788;Name=DJ40_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03955 NZ_CP008943.1 Protein Homology CDS 874273 874470 . + 0 ID=cds775;Parent=gene788;Dbxref=Genbank:WP_015683832.1;Name=WP_015683832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683832.1;transl_table=11 NZ_CP008943.1 RefSeq gene 874770 876214 . + . ID=gene789;Name=DJ40_RS03960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS03960;pseudo=true NZ_CP008943.1 Protein Homology CDS 874770 876214 . + 0 ID=cds776;Parent=gene789;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 876222 877208 . - . ID=gene790;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=DJ40_RS03965;old_locus_tag=DJ40_805 NZ_CP008943.1 Protein Homology CDS 876222 877208 . - 0 ID=cds777;Parent=gene790;Dbxref=Genbank:WP_038400015.1;Name=WP_038400015.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_038400015.1;transl_table=11 NZ_CP008943.1 RefSeq gene 877205 878953 . - . ID=gene791;Name=DJ40_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03970;old_locus_tag=DJ40_806 NZ_CP008943.1 Protein Homology CDS 877205 878953 . - 0 ID=cds778;Parent=gene791;Dbxref=Genbank:WP_038400016.1;Name=WP_038400016.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_038400016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 878989 881280 . - . ID=gene792;Name=DJ40_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03975;old_locus_tag=DJ40_807 NZ_CP008943.1 Protein Homology CDS 878989 881280 . - 0 ID=cds779;Parent=gene792;Dbxref=Genbank:WP_011192058.1;Name=WP_011192058.1;gbkey=CDS;product=competence protein ComEC;protein_id=WP_011192058.1;transl_table=11 NZ_CP008943.1 RefSeq gene 881541 881843 . + . ID=gene793;Name=DJ40_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03980;old_locus_tag=DJ40_809 NZ_CP008943.1 Protein Homology CDS 881541 881843 . + 0 ID=cds780;Parent=gene793;Dbxref=Genbank:WP_002430095.1;Name=WP_002430095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430095.1;transl_table=11 NZ_CP008943.1 RefSeq gene 881827 882111 . - . ID=gene794;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=DJ40_RS03985;old_locus_tag=DJ40_808 NZ_CP008943.1 Protein Homology CDS 881827 882111 . - 0 ID=cds781;Parent=gene794;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NZ_CP008943.1 RefSeq gene 882172 883845 . - . ID=gene795;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=DJ40_RS03990;old_locus_tag=DJ40_810 NZ_CP008943.1 Protein Homology CDS 882172 883845 . - 0 ID=cds782;Parent=gene795;Dbxref=Genbank:WP_038400018.1;Name=WP_038400018.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_038400018.1;transl_table=11 NZ_CP008943.1 RefSeq gene 884019 884711 . - . ID=gene796;Name=DJ40_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS03995;old_locus_tag=DJ40_811 NZ_CP008943.1 Protein Homology CDS 884019 884711 . - 0 ID=cds783;Parent=gene796;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11 NZ_CP008943.1 RefSeq gene 885024 886310 . - . ID=gene797;Name=DJ40_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04000;old_locus_tag=DJ40_812 NZ_CP008943.1 Protein Homology CDS 885024 886310 . - 0 ID=cds784;Parent=gene797;Dbxref=Genbank:WP_011192056.1;Name=WP_011192056.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_011192056.1;transl_table=11 NZ_CP008943.1 RefSeq gene 886488 887573 . - . ID=gene798;Name=DJ40_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04005;old_locus_tag=DJ40_813 NZ_CP008943.1 Protein Homology CDS 886488 887573 . - 0 ID=cds785;Parent=gene798;Dbxref=Genbank:WP_011192055.1;Name=WP_011192055.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_011192055.1;transl_table=11 NZ_CP008943.1 RefSeq gene 887940 889787 . - . ID=gene799;Name=DJ40_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04010;old_locus_tag=DJ40_814 NZ_CP008943.1 Protein Homology CDS 887940 889787 . - 0 ID=cds786;Parent=gene799;Dbxref=Genbank:WP_038400019.1;Name=WP_038400019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400019.1;transl_table=11 NZ_CP008943.1 RefSeq gene 889808 890902 . - . ID=gene800;Name=DJ40_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04015;old_locus_tag=DJ40_815 NZ_CP008943.1 Protein Homology CDS 889808 890902 . - 0 ID=cds787;Parent=gene800;Dbxref=Genbank:WP_038400020.1;Name=WP_038400020.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_038400020.1;transl_table=11 NZ_CP008943.1 RefSeq gene 891221 892258 . - . ID=gene801;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=DJ40_RS04020;old_locus_tag=DJ40_816 NZ_CP008943.1 Protein Homology CDS 891221 892258 . - 0 ID=cds788;Parent=gene801;Dbxref=Genbank:WP_038400021.1;Name=WP_038400021.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase II;protein_id=WP_038400021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 892407 894173 . + . ID=gene802;Name=DJ40_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04025;old_locus_tag=DJ40_817 NZ_CP008943.1 Protein Homology CDS 892407 894173 . + 0 ID=cds789;Parent=gene802;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11 NZ_CP008943.1 RefSeq gene 894870 895727 . + . ID=gene803;Name=DJ40_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04030;old_locus_tag=DJ40_818 NZ_CP008943.1 Protein Homology CDS 894870 895727 . + 0 ID=cds790;Parent=gene803;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NZ_CP008943.1 RefSeq gene 895783 898065 . + . ID=gene804;Name=DJ40_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04035;old_locus_tag=DJ40_819 NZ_CP008943.1 Protein Homology CDS 895783 898065 . + 0 ID=cds791;Parent=gene804;Dbxref=Genbank:WP_002211332.1;Name=WP_002211332.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=keto-acid formate acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NZ_CP008943.1 RefSeq gene 898183 898857 . - . ID=gene805;Name=DJ40_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04040;old_locus_tag=DJ40_820 NZ_CP008943.1 Protein Homology CDS 898183 898857 . - 0 ID=cds792;Parent=gene805;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11 NZ_CP008943.1 RefSeq gene 899844 900578 . + . ID=gene806;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=DJ40_RS04045;old_locus_tag=DJ40_821 NZ_CP008943.1 Protein Homology CDS 899844 900578 . + 0 ID=cds793;Parent=gene806;Dbxref=Genbank:WP_038400022.1;Name=WP_038400022.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating enzyme 1;protein_id=WP_038400022.1;transl_table=11 NZ_CP008943.1 RefSeq gene 900732 901880 . - . ID=gene807;Name=DJ40_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04050;old_locus_tag=DJ40_822 NZ_CP008943.1 Protein Homology CDS 900732 901880 . - 0 ID=cds794;Parent=gene807;Dbxref=Genbank:WP_002211335.1;Name=WP_002211335.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211335.1;transl_table=11 NZ_CP008943.1 RefSeq gene 902151 903443 . - . ID=gene808;Name=DJ40_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04055;old_locus_tag=DJ40_823 NZ_CP008943.1 Protein Homology CDS 902151 903443 . - 0 ID=cds795;Parent=gene808;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NZ_CP008943.1 RefSeq gene 903685 905028 . - . ID=gene809;Name=DJ40_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04060;old_locus_tag=DJ40_824 NZ_CP008943.1 Protein Homology CDS 903685 905028 . - 0 ID=cds796;Parent=gene809;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11 NZ_CP008943.1 RefSeq gene 905039 905647 . - . ID=gene810;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=DJ40_RS04065;old_locus_tag=DJ40_826 NZ_CP008943.1 Protein Homology CDS 905039 905647 . - 0 ID=cds797;Parent=gene810;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11 NZ_CP008943.1 RefSeq gene 905837 909766 . - . ID=gene811;Name=DJ40_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04070;old_locus_tag=DJ40_827 NZ_CP008943.1 Protein Homology CDS 905837 909766 . - 0 ID=cds798;Parent=gene811;Dbxref=Genbank:WP_038400024.1;Name=WP_038400024.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_038400024.1;transl_table=11 NZ_CP008943.1 RefSeq gene 909889 910383 . - . ID=gene812;Name=DJ40_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04075;old_locus_tag=DJ40_828 NZ_CP008943.1 Protein Homology CDS 909889 910383 . - 0 ID=cds799;Parent=gene812;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11 NZ_CP008943.1 RefSeq gene 911151 912113 . + . ID=gene813;Name=DJ40_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04080;old_locus_tag=DJ40_829 NZ_CP008943.1 Protein Homology CDS 911151 912113 . + 0 ID=cds800;Parent=gene813;Dbxref=Genbank:WP_038400026.1;Name=WP_038400026.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_038400026.1;transl_table=11 NZ_CP008943.1 RefSeq gene 912218 912355 . - . ID=gene814;Name=DJ40_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04085 NZ_CP008943.1 Protein Homology CDS 912218 912355 . - 0 ID=cds801;Parent=gene814;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11 NZ_CP008943.1 RefSeq gene 912572 914338 . + . ID=gene815;Name=DJ40_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04090;old_locus_tag=DJ40_830 NZ_CP008943.1 Protein Homology CDS 912572 914338 . + 0 ID=cds802;Parent=gene815;Dbxref=Genbank:WP_012304304.1;Name=WP_012304304.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_012304304.1;transl_table=11 NZ_CP008943.1 RefSeq gene 914341 916065 . + . ID=gene816;Name=DJ40_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04095;old_locus_tag=DJ40_831 NZ_CP008943.1 Protein Homology CDS 914341 916065 . + 0 ID=cds803;Parent=gene816;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11 NZ_CP008943.1 RefSeq gene 916284 916994 . + . ID=gene817;Name=DJ40_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04100;old_locus_tag=DJ40_832 NZ_CP008943.1 Protein Homology CDS 916284 916994 . + 0 ID=cds804;Parent=gene817;Dbxref=Genbank:WP_002211346.1;Name=WP_002211346.1;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NZ_CP008943.1 RefSeq gene 917160 917378 . + . ID=gene818;Name=DJ40_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04105;old_locus_tag=DJ40_833 NZ_CP008943.1 Protein Homology CDS 917160 917378 . + 0 ID=cds805;Parent=gene818;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_CP008943.1 RefSeq gene 917740 920016 . - . ID=gene819;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=DJ40_RS04110;old_locus_tag=DJ40_834 NZ_CP008943.1 Protein Homology CDS 917740 920016 . - 0 ID=cds806;Parent=gene819;Dbxref=Genbank:WP_011192049.1;Name=WP_011192049.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011192049.1;transl_table=11 NZ_CP008943.1 RefSeq gene 920042 920362 . - . ID=gene820;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=DJ40_RS04115;old_locus_tag=DJ40_835 NZ_CP008943.1 Protein Homology CDS 920042 920362 . - 0 ID=cds807;Parent=gene820;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11 NZ_CP008943.1 RefSeq gene 920723 920986 . + . ID=gene821;Name=DJ40_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04120;old_locus_tag=DJ40_836 NZ_CP008943.1 Protein Homology CDS 920723 920986 . + 0 ID=cds808;Parent=gene821;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11 NZ_CP008943.1 RefSeq gene 921267 923216 . - . ID=gene822;Name=DJ40_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04125;old_locus_tag=DJ40_837 NZ_CP008943.1 Protein Homology CDS 921267 923216 . - 0 ID=cds809;Parent=gene822;Dbxref=Genbank:WP_002211351.1;Name=WP_002211351.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002211351.1;transl_table=11 NZ_CP008943.1 RefSeq gene 923216 924328 . - . ID=gene823;Name=DJ40_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04130;old_locus_tag=DJ40_838 NZ_CP008943.1 Protein Homology CDS 923216 924328 . - 0 ID=cds810;Parent=gene823;Dbxref=Genbank:WP_002216705.1;Name=WP_002216705.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11 NZ_CP008943.1 RefSeq gene 924565 925512 . + . ID=gene824;Name=DJ40_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04135;old_locus_tag=DJ40_839 NZ_CP008943.1 Protein Homology CDS 924565 925512 . + 0 ID=cds811;Parent=gene824;Dbxref=Genbank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211355.1;transl_table=11 NZ_CP008943.1 RefSeq gene 925649 927316 . - . ID=gene825;Name=DJ40_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04140;old_locus_tag=DJ40_840 NZ_CP008943.1 Protein Homology CDS 925649 927316 . - 0 ID=cds812;Parent=gene825;Dbxref=Genbank:WP_038400027.1;Name=WP_038400027.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400027.1;transl_table=11 NZ_CP008943.1 RefSeq gene 927669 928565 . + . ID=gene826;Name=DJ40_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04145;old_locus_tag=DJ40_841 NZ_CP008943.1 Protein Homology CDS 927669 928565 . + 0 ID=cds813;Parent=gene826;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11 NZ_CP008943.1 RefSeq gene 928766 930418 . + . ID=gene827;Name=DJ40_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04150;old_locus_tag=DJ40_842 NZ_CP008943.1 Protein Homology CDS 928766 930418 . + 0 ID=cds814;Parent=gene827;Dbxref=Genbank:WP_011192048.1;Name=WP_011192048.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_011192048.1;transl_table=11 NZ_CP008943.1 RefSeq gene 930532 931554 . + . ID=gene828;Name=DJ40_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04155;old_locus_tag=DJ40_843 NZ_CP008943.1 Protein Homology CDS 930532 931554 . + 0 ID=cds815;Parent=gene828;Dbxref=Genbank:WP_002211360.1;Name=WP_002211360.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211360.1;transl_table=11 NZ_CP008943.1 RefSeq gene 931698 933419 . + . ID=gene829;Name=DJ40_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04160;old_locus_tag=DJ40_844 NZ_CP008943.1 Protein Homology CDS 931698 933419 . + 0 ID=cds816;Parent=gene829;Dbxref=Genbank:WP_011192046.1;Name=WP_011192046.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_011192046.1;transl_table=11 NZ_CP008943.1 RefSeq gene 933768 934787 . + . ID=gene830;Name=DJ40_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04165;old_locus_tag=DJ40_845 NZ_CP008943.1 Protein Homology CDS 933768 934787 . + 0 ID=cds817;Parent=gene830;Dbxref=Genbank:WP_038400028.1;Name=WP_038400028.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_038400028.1;transl_table=11 NZ_CP008943.1 RefSeq gene 934784 936274 . + . ID=gene831;Name=DJ40_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04170;old_locus_tag=DJ40_846 NZ_CP008943.1 Protein Homology CDS 934784 936274 . + 0 ID=cds818;Parent=gene831;Dbxref=Genbank:WP_011192045.1;Name=WP_011192045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192045.1;transl_table=11 NZ_CP008943.1 RefSeq gene 936374 937381 . + . ID=gene832;Name=DJ40_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04175;old_locus_tag=DJ40_847 NZ_CP008943.1 Protein Homology CDS 936374 937381 . + 0 ID=cds819;Parent=gene832;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11 NZ_CP008943.1 RefSeq gene 937478 938053 . + . ID=gene833;Name=DJ40_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04180;old_locus_tag=DJ40_848 NZ_CP008943.1 Protein Homology CDS 937478 938053 . + 0 ID=cds820;Parent=gene833;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NZ_CP008943.1 RefSeq gene 938223 938783 . + . ID=gene834;Name=DJ40_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04185;old_locus_tag=DJ40_849 NZ_CP008943.1 Protein Homology CDS 938223 938783 . + 0 ID=cds821;Parent=gene834;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NZ_CP008943.1 RefSeq gene 939078 939806 . + . ID=gene835;Name=DJ40_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04190;old_locus_tag=DJ40_850 NZ_CP008943.1 Protein Homology CDS 939078 939806 . + 0 ID=cds822;Parent=gene835;Dbxref=Genbank:WP_012105392.1;Name=WP_012105392.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_012105392.1;transl_table=11 NZ_CP008943.1 RefSeq gene 939827 940558 . + . ID=gene836;Name=DJ40_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04195;old_locus_tag=DJ40_851 NZ_CP008943.1 Protein Homology CDS 939827 940558 . + 0 ID=cds823;Parent=gene836;Dbxref=Genbank:WP_038400030.1;Name=WP_038400030.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_038400030.1;transl_table=11 NZ_CP008943.1 RefSeq gene 940570 941286 . + . ID=gene837;Name=DJ40_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04200;old_locus_tag=DJ40_852 NZ_CP008943.1 Protein Homology CDS 940570 941286 . + 0 ID=cds824;Parent=gene837;Dbxref=Genbank:WP_002211369.1;Name=WP_002211369.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_002211369.1;transl_table=11 NZ_CP008943.1 RefSeq gene 941286 941954 . + . ID=gene838;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=DJ40_RS04205;old_locus_tag=DJ40_853 NZ_CP008943.1 Protein Homology CDS 941286 941954 . + 0 ID=cds825;Parent=gene838;Dbxref=Genbank:WP_002211370.1;Name=WP_002211370.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_002211370.1;transl_table=11 NZ_CP008943.1 RefSeq gene 942139 942984 . - . ID=gene839;Name=DJ40_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04210;old_locus_tag=DJ40_854 NZ_CP008943.1 Protein Homology CDS 942139 942984 . - 0 ID=cds826;Parent=gene839;Dbxref=Genbank:WP_002223483.1;Name=WP_002223483.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223483.1;transl_table=11 NZ_CP008943.1 RefSeq gene 942981 944351 . - . ID=gene840;Name=DJ40_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04215;old_locus_tag=DJ40_855 NZ_CP008943.1 Protein Homology CDS 942981 944351 . - 0 ID=cds827;Parent=gene840;Dbxref=Genbank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211373.1;transl_table=11 NZ_CP008943.1 RefSeq gene 944344 945141 . - . ID=gene841;Name=DJ40_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04220;old_locus_tag=DJ40_856 NZ_CP008943.1 Protein Homology CDS 944344 945141 . - 0 ID=cds828;Parent=gene841;Dbxref=Genbank:WP_012304311.1;Name=WP_012304311.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_012304311.1;transl_table=11 NZ_CP008943.1 RefSeq gene 945129 945914 . - . ID=gene842;Name=DJ40_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04225;old_locus_tag=DJ40_857 NZ_CP008943.1 Protein Homology CDS 945129 945914 . - 0 ID=cds829;Parent=gene842;Dbxref=Genbank:WP_012105395.1;Name=WP_012105395.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_012105395.1;transl_table=11 NZ_CP008943.1 RefSeq gene 945911 946969 . - . ID=gene843;Name=DJ40_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04230;old_locus_tag=DJ40_858 NZ_CP008943.1 Protein Homology CDS 945911 946969 . - 0 ID=cds830;Parent=gene843;Dbxref=Genbank:WP_032466212.1;Name=WP_032466212.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_032466212.1;transl_table=11 NZ_CP008943.1 RefSeq gene 946969 948060 . - . ID=gene844;Name=DJ40_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04235;old_locus_tag=DJ40_859 NZ_CP008943.1 Protein Homology CDS 946969 948060 . - 0 ID=cds831;Parent=gene844;Dbxref=Genbank:WP_032466211.1;Name=WP_032466211.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_032466211.1;transl_table=11 NZ_CP008943.1 RefSeq gene 948495 949421 . - . ID=gene845;Name=DJ40_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04240;old_locus_tag=DJ40_860 NZ_CP008943.1 Protein Homology CDS 948495 949421 . - 0 ID=cds832;Parent=gene845;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11 NZ_CP008943.1 RefSeq gene 949955 950071 . - . ID=gene846;Name=DJ40_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04245 NZ_CP008943.1 Protein Homology CDS 949955 950071 . - 0 ID=cds833;Parent=gene846;Dbxref=Genbank:WP_012105399.1;Name=WP_012105399.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105399.1;transl_table=11 NZ_CP008943.1 RefSeq gene 950111 950842 . + . ID=gene847;Name=DJ40_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04250;old_locus_tag=DJ40_861 NZ_CP008943.1 Protein Homology CDS 950111 950842 . + 0 ID=cds834;Parent=gene847;Dbxref=Genbank:WP_002220045.1;Name=WP_002220045.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11 NZ_CP008943.1 RefSeq gene 950969 952099 . - . ID=gene848;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=DJ40_RS04255;old_locus_tag=DJ40_862 NZ_CP008943.1 Protein Homology CDS 950969 952099 . - 0 ID=cds835;Parent=gene848;Dbxref=Genbank:WP_038400032.1;Name=WP_038400032.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA methyltransferase;protein_id=WP_038400032.1;transl_table=11 NZ_CP008943.1 RefSeq gene 952183 952647 . - . ID=gene849;Name=DJ40_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04260;old_locus_tag=DJ40_863 NZ_CP008943.1 Protein Homology CDS 952183 952647 . - 0 ID=cds836;Parent=gene849;Dbxref=Genbank:WP_011192038.1;Name=WP_011192038.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192038.1;transl_table=11 NZ_CP008943.1 RefSeq gene 952772 953617 . - . ID=gene850;Name=DJ40_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04265;old_locus_tag=DJ40_864 NZ_CP008943.1 Protein Homology CDS 952772 953617 . - 0 ID=cds837;Parent=gene850;Dbxref=Genbank:WP_002208758.1;Name=WP_002208758.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208758.1;transl_table=11 NZ_CP008943.1 RefSeq gene 953614 954579 . - . ID=gene851;Name=DJ40_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04270;old_locus_tag=DJ40_865 NZ_CP008943.1 Protein Homology CDS 953614 954579 . - 0 ID=cds838;Parent=gene851;Dbxref=Genbank:WP_011192037.1;Name=WP_011192037.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_011192037.1;transl_table=11 NZ_CP008943.1 RefSeq gene 954604 955737 . - . ID=gene852;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=DJ40_RS04275;old_locus_tag=DJ40_866 NZ_CP008943.1 Protein Homology CDS 954604 955737 . - 0 ID=cds839;Parent=gene852;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11 NZ_CP008943.1 RefSeq gene 955908 957017 . - . ID=gene853;Name=DJ40_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04280;old_locus_tag=DJ40_867 NZ_CP008943.1 Protein Homology CDS 955908 957017 . - 0 ID=cds840;Parent=gene853;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11 NZ_CP008943.1 RefSeq gene 957535 958020 . - . ID=gene854;Name=DJ40_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04285;old_locus_tag=DJ40_868 NZ_CP008943.1 Protein Homology CDS 957535 958020 . - 0 ID=cds841;Parent=gene854;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11 NZ_CP008943.1 RefSeq gene 958027 958146 . - . ID=gene855;Name=DJ40_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04290 NZ_CP008943.1 Protein Homology CDS 958027 958146 . - 0 ID=cds842;Parent=gene855;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11 NZ_CP008943.1 RefSeq gene 958162 958476 . - . ID=gene856;Name=DJ40_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04295;old_locus_tag=DJ40_869 NZ_CP008943.1 Protein Homology CDS 958162 958476 . - 0 ID=cds843;Parent=gene856;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11 NZ_CP008943.1 RefSeq gene 958939 959202 . + . ID=gene857;Name=DJ40_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04300;old_locus_tag=DJ40_870 NZ_CP008943.1 Protein Homology CDS 958939 959202 . + 0 ID=cds844;Parent=gene857;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NZ_CP008943.1 RefSeq gene 959613 961301 . + . ID=gene858;Name=DJ40_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04305;old_locus_tag=DJ40_871 NZ_CP008943.1 Protein Homology CDS 959613 961301 . + 0 ID=cds845;Parent=gene858;Dbxref=Genbank:WP_032466209.1;Name=WP_032466209.1;gbkey=CDS;product=transporter;protein_id=WP_032466209.1;transl_table=11 NZ_CP008943.1 RefSeq gene 961778 962449 . + . ID=gene859;Name=DJ40_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04310;old_locus_tag=DJ40_872 NZ_CP008943.1 Protein Homology CDS 961778 962449 . + 0 ID=cds846;Parent=gene859;Dbxref=Genbank:WP_002208767.1;Name=WP_002208767.1;gbkey=CDS;product=phosphoesterase;protein_id=WP_002208767.1;transl_table=11 NZ_CP008943.1 RefSeq gene 962449 963054 . + . ID=gene860;Name=DJ40_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04315;old_locus_tag=DJ40_873 NZ_CP008943.1 Protein Homology CDS 962449 963054 . + 0 ID=cds847;Parent=gene860;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11 NZ_CP008943.1 RefSeq gene 963312 963983 . + . ID=gene861;Name=DJ40_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04320;old_locus_tag=DJ40_874 NZ_CP008943.1 Protein Homology CDS 963312 963983 . + 0 ID=cds848;Parent=gene861;Dbxref=Genbank:WP_002208769.1;Name=WP_002208769.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NZ_CP008943.1 RefSeq gene 964213 964977 . + . ID=gene862;Name=DJ40_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04325;old_locus_tag=DJ40_875 NZ_CP008943.1 Protein Homology CDS 964213 964977 . + 0 ID=cds849;Parent=gene862;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11 NZ_CP008943.1 RefSeq gene 966065 967366 . + . ID=gene863;Name=DJ40_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04330;old_locus_tag=DJ40_876 NZ_CP008943.1 Protein Homology CDS 966065 967366 . + 0 ID=cds850;Parent=gene863;Dbxref=Genbank:WP_011192035.1;Name=WP_011192035.1;gbkey=CDS;product=serine/threonine transporter;protein_id=WP_011192035.1;transl_table=11 NZ_CP008943.1 RefSeq gene 967363 967515 . - . ID=gene864;Name=DJ40_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04335 NZ_CP008943.1 Protein Homology CDS 967363 967515 . - 0 ID=cds851;Parent=gene864;Dbxref=Genbank:WP_042592574.1;Name=WP_042592574.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592574.1;transl_table=11 NZ_CP008943.1 RefSeq gene 967790 968995 . - . ID=gene865;Name=DJ40_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04340;old_locus_tag=DJ40_877 NZ_CP008943.1 Protein Homology CDS 967790 968995 . - 0 ID=cds852;Parent=gene865;Dbxref=Genbank:WP_002208774.1;Name=WP_002208774.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002208774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 969330 970001 . - . ID=gene866;Name=DJ40_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04345;old_locus_tag=DJ40_878 NZ_CP008943.1 Protein Homology CDS 969330 970001 . - 0 ID=cds853;Parent=gene866;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 969998 970984 . - . ID=gene867;Name=DJ40_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04350;old_locus_tag=DJ40_879 NZ_CP008943.1 Protein Homology CDS 969998 970984 . - 0 ID=cds854;Parent=gene867;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NZ_CP008943.1 RefSeq gene 970981 971805 . - . ID=gene868;Name=DJ40_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04355;old_locus_tag=DJ40_880 NZ_CP008943.1 Protein Homology CDS 970981 971805 . - 0 ID=cds855;Parent=gene868;Dbxref=Genbank:WP_011192034.1;Name=WP_011192034.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_011192034.1;transl_table=11 NZ_CP008943.1 RefSeq gene 971910 972977 . - . ID=gene869;Name=DJ40_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04360;old_locus_tag=DJ40_881 NZ_CP008943.1 Protein Homology CDS 971910 972977 . - 0 ID=cds856;Parent=gene869;Dbxref=Genbank:WP_002208778.1;Name=WP_002208778.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_002208778.1;transl_table=11 NZ_CP008943.1 RefSeq gene 973464 974114 . + . ID=gene870;Name=DJ40_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04365;old_locus_tag=DJ40_882 NZ_CP008943.1 Protein Homology CDS 973464 974114 . + 0 ID=cds857;Parent=gene870;Dbxref=Genbank:WP_002215448.1;Name=WP_002215448.1;gbkey=CDS;product=hydrolase;protein_id=WP_002215448.1;transl_table=11 NZ_CP008943.1 RefSeq gene 974259 974879 . + . ID=gene871;Name=DJ40_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04370;old_locus_tag=DJ40_883 NZ_CP008943.1 Protein Homology CDS 974259 974879 . + 0 ID=cds858;Parent=gene871;Dbxref=Genbank:WP_002208781.1;Name=WP_002208781.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002208781.1;transl_table=11 NZ_CP008943.1 RefSeq gene 975027 977024 . - . ID=gene872;Name=DJ40_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04375;old_locus_tag=DJ40_884 NZ_CP008943.1 Protein Homology CDS 975027 977024 . - 0 ID=cds859;Parent=gene872;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NZ_CP008943.1 RefSeq gene 977284 978072 . - . ID=gene873;Name=DJ40_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04380;old_locus_tag=DJ40_885 NZ_CP008943.1 Protein Homology CDS 977284 978072 . - 0 ID=cds860;Parent=gene873;Dbxref=Genbank:WP_011192030.1;Name=WP_011192030.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_011192030.1;transl_table=11 NZ_CP008943.1 RefSeq gene 978069 979151 . - . ID=gene874;Name=DJ40_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04385;old_locus_tag=DJ40_886 NZ_CP008943.1 Protein Homology CDS 978069 979151 . - 0 ID=cds861;Parent=gene874;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NZ_CP008943.1 RefSeq gene 979346 980491 . - . ID=gene875;Name=DJ40_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04390;old_locus_tag=DJ40_887 NZ_CP008943.1 Protein Homology CDS 979346 980491 . - 0 ID=cds862;Parent=gene875;Dbxref=Genbank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208785.1;transl_table=11 NZ_CP008943.1 RefSeq gene 980777 982288 . - . ID=gene876;Name=DJ40_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04395;old_locus_tag=DJ40_888 NZ_CP008943.1 Protein Homology CDS 980777 982288 . - 0 ID=cds863;Parent=gene876;Dbxref=Genbank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;product=lysine transporter;protein_id=WP_002208786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 982546 983418 . - . ID=gene877;Name=DJ40_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04400;old_locus_tag=DJ40_890 NZ_CP008943.1 Protein Homology CDS 982546 983418 . - 0 ID=cds864;Parent=gene877;Dbxref=Genbank:WP_002208788.1;Name=WP_002208788.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208788.1;transl_table=11 NZ_CP008943.1 RefSeq gene 984076 985164 . + . ID=gene878;Name=DJ40_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04405;old_locus_tag=DJ40_891 NZ_CP008943.1 Protein Homology CDS 984076 985164 . + 0 ID=cds865;Parent=gene878;Dbxref=Genbank:WP_002208790.1;Name=WP_002208790.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208790.1;transl_table=11 NZ_CP008943.1 RefSeq gene 985328 986185 . + . ID=gene879;Name=DJ40_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04410;old_locus_tag=DJ40_892 NZ_CP008943.1 Protein Homology CDS 985328 986185 . + 0 ID=cds866;Parent=gene879;Dbxref=Genbank:WP_002208791.1;Name=WP_002208791.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_002208791.1;transl_table=11 NZ_CP008943.1 RefSeq gene 986272 988743 . - . ID=gene880;Name=DJ40_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04415;old_locus_tag=DJ40_893 NZ_CP008943.1 Protein Homology CDS 986272 988743 . - 0 ID=cds867;Parent=gene880;Dbxref=Genbank:WP_038401571.1;Name=WP_038401571.1;gbkey=CDS;product=usher protein;protein_id=WP_038401571.1;transl_table=11 NZ_CP008943.1 RefSeq gene 988827 989648 . - . ID=gene881;Name=DJ40_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04420;old_locus_tag=DJ40_894 NZ_CP008943.1 Protein Homology CDS 988827 989648 . - 0 ID=cds868;Parent=gene881;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NZ_CP008943.1 RefSeq gene 989775 990251 . - . ID=gene882;Name=DJ40_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04425;old_locus_tag=DJ40_895 NZ_CP008943.1 Protein Homology CDS 989775 990251 . - 0 ID=cds869;Parent=gene882;Dbxref=Genbank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_002208794.1;transl_table=11 NZ_CP008943.1 RefSeq gene 990796 991284 . - . ID=gene883;Name=DJ40_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04430;old_locus_tag=DJ40_896 NZ_CP008943.1 Protein Homology CDS 990796 991284 . - 0 ID=cds870;Parent=gene883;Dbxref=Genbank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;product=protein PsaF;protein_id=WP_002216523.1;transl_table=11 NZ_CP008943.1 RefSeq gene 991281 991925 . - . ID=gene884;Name=DJ40_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04435;old_locus_tag=DJ40_897 NZ_CP008943.1 Protein Homology CDS 991281 991925 . - 0 ID=cds871;Parent=gene884;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11 NZ_CP008943.1 RefSeq gene 992250 993950 . - . ID=gene885;Name=DJ40_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04440;old_locus_tag=DJ40_898 NZ_CP008943.1 Protein Homology CDS 992250 993950 . - 0 ID=cds872;Parent=gene885;Dbxref=Genbank:WP_011192029.1;Name=WP_011192029.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_011192029.1;transl_table=11 NZ_CP008943.1 RefSeq gene 993965 994903 . - . ID=gene886;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=DJ40_RS04445;old_locus_tag=DJ40_899 NZ_CP008943.1 Protein Homology CDS 993965 994903 . - 0 ID=cds873;Parent=gene886;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NZ_CP008943.1 RefSeq gene 994900 996033 . - . ID=gene887;Name=DJ40_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04450;old_locus_tag=DJ40_900 NZ_CP008943.1 Protein Homology CDS 994900 996033 . - 0 ID=cds874;Parent=gene887;Dbxref=Genbank:WP_012304320.1;Name=WP_012304320.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_012304320.1;transl_table=11 NZ_CP008943.1 RefSeq gene 996295 996750 . + . ID=gene888;Name=DJ40_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04455;old_locus_tag=DJ40_901 NZ_CP008943.1 Protein Homology CDS 996295 996750 . + 0 ID=cds875;Parent=gene888;Dbxref=Genbank:WP_002208801.1;Name=WP_002208801.1;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=WP_002208801.1;transl_table=11 NZ_CP008943.1 RefSeq gene 996883 997881 . - . ID=gene889;Name=DJ40_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04460;old_locus_tag=DJ40_902 NZ_CP008943.1 Protein Homology CDS 996883 997881 . - 0 ID=cds876;Parent=gene889;Dbxref=Genbank:WP_038400036.1;Name=WP_038400036.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038400036.1;transl_table=11 NZ_CP008943.1 RefSeq gene 997917 999431 . - . ID=gene890;Name=DJ40_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04465;old_locus_tag=DJ40_903 NZ_CP008943.1 Protein Homology CDS 997917 999431 . - 0 ID=cds877;Parent=gene890;Dbxref=Genbank:WP_042592840.1;Name=WP_042592840.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_042592840.1;transl_table=11 NZ_CP008943.1 RefSeq gene 999600 1000688 . - . ID=gene891;Name=DJ40_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04470;old_locus_tag=DJ40_904 NZ_CP008943.1 Protein Homology CDS 999600 1000688 . - 0 ID=cds878;Parent=gene891;Dbxref=Genbank:WP_011192026.1;Name=WP_011192026.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011192026.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1000796 1001506 . - . ID=gene892;Name=DJ40_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04475;old_locus_tag=DJ40_905 NZ_CP008943.1 Protein Homology CDS 1000796 1001506 . - 0 ID=cds879;Parent=gene892;Dbxref=Genbank:WP_002208805.1;Name=WP_002208805.1;gbkey=CDS;product=ribose-5-phosphate isomerase A 2;protein_id=WP_002208805.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1001526 1003079 . - . ID=gene893;Name=DJ40_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04480;old_locus_tag=DJ40_906 NZ_CP008943.1 Protein Homology CDS 1001526 1003079 . - 0 ID=cds880;Parent=gene893;Dbxref=Genbank:WP_038400038.1;Name=WP_038400038.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_038400038.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1003083 1004579 . - . ID=gene894;Name=DJ40_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04485;old_locus_tag=DJ40_907 NZ_CP008943.1 Protein Homology CDS 1003083 1004579 . - 0 ID=cds881;Parent=gene894;Dbxref=Genbank:WP_012304325.1;Name=WP_012304325.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_012304325.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1004931 1006073 . + . ID=gene895;Name=DJ40_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04490;old_locus_tag=DJ40_908 NZ_CP008943.1 Protein Homology CDS 1004931 1006073 . + 0 ID=cds882;Parent=gene895;Dbxref=Genbank:WP_038400039.1;Name=WP_038400039.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_038400039.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1006085 1007035 . + . ID=gene896;Name=DJ40_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04495;old_locus_tag=DJ40_909 NZ_CP008943.1 Protein Homology CDS 1006085 1007035 . + 0 ID=cds883;Parent=gene896;Dbxref=Genbank:WP_012105418.1;Name=WP_012105418.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_012105418.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1007046 1007861 . + . ID=gene897;Name=DJ40_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04500;old_locus_tag=DJ40_910 NZ_CP008943.1 Protein Homology CDS 1007046 1007861 . + 0 ID=cds884;Parent=gene897;Dbxref=Genbank:WP_032466202.1;Name=WP_032466202.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_032466202.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1007930 1008184 . - . ID=gene898;Name=DJ40_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04505;old_locus_tag=DJ40_911 NZ_CP008943.1 Protein Homology CDS 1007930 1008184 . - 0 ID=cds885;Parent=gene898;Dbxref=Genbank:WP_011192021.1;Name=WP_011192021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1008578 1009822 . + . ID=gene899;Name=DJ40_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04510;old_locus_tag=DJ40_912 NZ_CP008943.1 Protein Homology CDS 1008578 1009822 . + 0 ID=cds886;Parent=gene899;Dbxref=Genbank:WP_002208812.1;Name=WP_002208812.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1009926 1010498 . + . ID=gene900;Name=DJ40_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04515;old_locus_tag=DJ40_913 NZ_CP008943.1 Protein Homology CDS 1009926 1010498 . + 0 ID=cds887;Parent=gene900;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1010637 1011830 . - . ID=gene901;Name=DJ40_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04520;old_locus_tag=DJ40_914 NZ_CP008943.1 Protein Homology CDS 1010637 1011830 . - 0 ID=cds888;Parent=gene901;Dbxref=Genbank:WP_038400041.1;Name=WP_038400041.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_038400041.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1012433 1013905 . + . ID=gene902;Name=DJ40_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04525;old_locus_tag=DJ40_915 NZ_CP008943.1 Protein Homology CDS 1012433 1013905 . + 0 ID=cds889;Parent=gene902;Dbxref=Genbank:WP_002224659.1;Name=WP_002224659.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_002224659.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1014034 1014777 . - . ID=gene903;Name=DJ40_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04530;old_locus_tag=DJ40_916 NZ_CP008943.1 Protein Homology CDS 1014034 1014777 . - 0 ID=cds890;Parent=gene903;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1015148 1015261 . + . ID=gene904;Name=DJ40_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04535 NZ_CP008943.1 Protein Homology CDS 1015148 1015261 . + 0 ID=cds891;Parent=gene904;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1015585 1016568 . + . ID=gene905;Name=DJ40_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04540;old_locus_tag=DJ40_918 NZ_CP008943.1 Protein Homology CDS 1015585 1016568 . + 0 ID=cds892;Parent=gene905;Dbxref=Genbank:WP_012413591.1;Name=WP_012413591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413591.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1016627 1017328 . + . ID=gene906;Name=DJ40_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04545;old_locus_tag=DJ40_919 NZ_CP008943.1 Protein Homology CDS 1016627 1017328 . + 0 ID=cds893;Parent=gene906;Dbxref=Genbank:WP_012105423.1;Name=WP_012105423.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105423.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1017770 1018354 . + . ID=gene907;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=DJ40_RS04550;old_locus_tag=DJ40_920 NZ_CP008943.1 Protein Homology CDS 1017770 1018354 . + 0 ID=cds894;Parent=gene907;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1019048 1020520 . + . ID=gene908;Name=DJ40_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04555;old_locus_tag=DJ40_921 NZ_CP008943.1 Protein Homology CDS 1019048 1020520 . + 0 ID=cds895;Parent=gene908;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1020602 1022410 . + . ID=gene909;Name=DJ40_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04560;old_locus_tag=DJ40_922 NZ_CP008943.1 Protein Homology CDS 1020602 1022410 . + 0 ID=cds896;Parent=gene909;Dbxref=Genbank:WP_038400043.1;Name=WP_038400043.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=antibiotic ABC transporter substrate-binding protein;protein_id=WP_038400043.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1022420 1023520 . + . ID=gene910;Name=DJ40_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04565;old_locus_tag=DJ40_923 NZ_CP008943.1 Protein Homology CDS 1022420 1023520 . + 0 ID=cds897;Parent=gene910;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1023523 1024548 . + . ID=gene911;Name=DJ40_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04570;old_locus_tag=DJ40_924 NZ_CP008943.1 Protein Homology CDS 1023523 1024548 . + 0 ID=cds898;Parent=gene911;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1024550 1026142 . + . ID=gene912;Name=DJ40_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04575;old_locus_tag=DJ40_925 NZ_CP008943.1 Protein Homology CDS 1024550 1026142 . + 0 ID=cds899;Parent=gene912;Dbxref=Genbank:WP_012105426.1;Name=WP_012105426.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_012105426.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1026203 1026547 . - . ID=gene913;Name=DJ40_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04580;old_locus_tag=DJ40_926 NZ_CP008943.1 Protein Homology CDS 1026203 1026547 . - 0 ID=cds900;Parent=gene913;Dbxref=Genbank:WP_011192014.1;Name=WP_011192014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192014.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1027548 1028747 . - . ID=gene914;Name=DJ40_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04585;old_locus_tag=DJ40_927 NZ_CP008943.1 Protein Homology CDS 1027548 1028747 . - 0 ID=cds901;Parent=gene914;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1028896 1029603 . - . ID=gene915;Name=DJ40_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04590;old_locus_tag=DJ40_928 NZ_CP008943.1 Protein Homology CDS 1028896 1029603 . - 0 ID=cds902;Parent=gene915;Dbxref=Genbank:WP_012105427.1;Name=WP_012105427.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=16S rRNA pseudouridylate synthase;protein_id=WP_012105427.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1030117 1031874 . + . ID=gene916;Name=DJ40_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04595;old_locus_tag=DJ40_929 NZ_CP008943.1 Protein Homology CDS 1030117 1031874 . + 0 ID=cds903;Parent=gene916;Dbxref=Genbank:WP_012105428.1;Name=WP_012105428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105428.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1032036 1032320 . + . ID=gene917;Name=DJ40_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04600;old_locus_tag=DJ40_930 NZ_CP008943.1 Protein Homology CDS 1032036 1032320 . + 0 ID=cds904;Parent=gene917;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1032350 1033068 . + . ID=id51;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1032460 1032917 . - . ID=gene918;Name=DJ40_RS04605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS04605;pseudo=true NZ_CP008943.1 Protein Homology CDS 1032460 1032917 . - 0 ID=cds905;Parent=gene918;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1033118 1034122 . - . ID=gene919;Name=DJ40_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04610;old_locus_tag=DJ40_932 NZ_CP008943.1 Protein Homology CDS 1033118 1034122 . - 0 ID=cds906;Parent=gene919;Dbxref=Genbank:WP_038400045.1;Name=WP_038400045.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_038400045.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1034300 1034527 . + . ID=gene920;Name=DJ40_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04615;old_locus_tag=DJ40_933 NZ_CP008943.1 Protein Homology CDS 1034300 1034527 . + 0 ID=cds907;Parent=gene920;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1034555 1036351 . + . ID=gene921;Name=DJ40_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04620;old_locus_tag=DJ40_934 NZ_CP008943.1 Protein Homology CDS 1034555 1036351 . + 0 ID=cds908;Parent=gene921;Dbxref=Genbank:WP_002208837.1;Name=WP_002208837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208837.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1036456 1036532 . + . ID=gene922;Name=DJ40_RS04625;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS04625;old_locus_tag=DJ40_935 NZ_CP008943.1 tRNAscan-SE tRNA 1036456 1036532 . + . ID=rna11;Parent=gene922;anticodon=(pos:1036490..1036492);gbkey=tRNA;product=tRNA-Pro NZ_CP008943.1 tRNAscan-SE exon 1036456 1036532 . + . ID=id52;Parent=rna11;anticodon=(pos:1036490..1036492);gbkey=tRNA;product=tRNA-Pro NZ_CP008943.1 RefSeq repeat_region 1037091 1037956 . + . ID=id53;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1037322 1037498 . + . ID=gene923;Name=DJ40_RS04635;end_range=1037498,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS04635;old_locus_tag=DJ40_937;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 1037322 1037498 . + 0 ID=cds909;Parent=gene923;end_range=1037498,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1037585 1038136 . + . ID=gene924;Name=DJ40_RS21835;end_range=1038136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21835;old_locus_tag=DJ40_938;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 1037585 1038136 . + 0 ID=cds910;Parent=gene924;end_range=1038136,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=HNH endonuclease;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1038453 1038656 . + . ID=gene925;Name=DJ40_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04645 NZ_CP008943.1 Protein Homology CDS 1038453 1038656 . + 0 ID=cds911;Parent=gene925;Dbxref=Genbank:WP_025382022.1;Name=WP_025382022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025382022.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1038456 1038666 . + . ID=id54;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1038685 1038969 . + . ID=gene926;Name=DJ40_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04650;old_locus_tag=DJ40_940 NZ_CP008943.1 Protein Homology CDS 1038685 1038969 . + 0 ID=cds912;Parent=gene926;Dbxref=Genbank:WP_011192009.1;Name=WP_011192009.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_011192009.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1039102 1039234 . + . ID=id55;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1039555 1039917 . + . ID=gene927;Name=DJ40_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04660;old_locus_tag=DJ40_942 NZ_CP008943.1 Protein Homology CDS 1039555 1039917 . + 0 ID=cds913;Parent=gene927;Dbxref=Genbank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1040043 1041479 . - . ID=gene928;Name=DJ40_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04665;old_locus_tag=DJ40_943 NZ_CP008943.1 Protein Homology CDS 1040043 1041479 . - 0 ID=cds914;Parent=gene928;Dbxref=Genbank:WP_002208842.1;Name=WP_002208842.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1041770 1042510 . - . ID=gene929;Name=DJ40_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04670;old_locus_tag=DJ40_945 NZ_CP008943.1 Protein Homology CDS 1041770 1042510 . - 0 ID=cds915;Parent=gene929;Dbxref=Genbank:WP_002208843.1;Name=WP_002208843.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1042808 1043587 . - . ID=gene930;Name=DJ40_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04675 NZ_CP008943.1 Protein Homology CDS 1042808 1043587 . - 0 ID=cds916;Parent=gene930;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1043684 1044031 . - . ID=gene931;Name=DJ40_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04680 NZ_CP008943.1 Protein Homology CDS 1043684 1044031 . - 0 ID=cds917;Parent=gene931;Dbxref=Genbank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1044028 1044286 . - . ID=gene932;Name=DJ40_RS04685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS04685;pseudo=true NZ_CP008943.1 Protein Homology CDS 1044028 1044286 . - 0 ID=cds918;Parent=gene932;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1044283 1045419 . - . ID=gene933;Name=DJ40_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04690;old_locus_tag=DJ40_948 NZ_CP008943.1 Protein Homology CDS 1044283 1045419 . - 0 ID=cds919;Parent=gene933;Dbxref=Genbank:WP_011192005.1;Name=WP_011192005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192005.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1045423 1045878 . - . ID=gene934;Name=DJ40_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04695;old_locus_tag=DJ40_949 NZ_CP008943.1 Protein Homology CDS 1045423 1045878 . - 0 ID=cds920;Parent=gene934;Dbxref=Genbank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208848.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1045875 1046471 . - . ID=gene935;Name=DJ40_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04700;old_locus_tag=DJ40_950 NZ_CP008943.1 Protein Homology CDS 1045875 1046471 . - 0 ID=cds921;Parent=gene935;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1046487 1047542 . - . ID=gene936;Name=DJ40_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04705;old_locus_tag=DJ40_951 NZ_CP008943.1 Protein Homology CDS 1046487 1047542 . - 0 ID=cds922;Parent=gene936;Dbxref=Genbank:WP_011192004.1;Name=WP_011192004.1;gbkey=CDS;product=tail protein;protein_id=WP_011192004.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1047539 1048945 . - . ID=gene937;Name=DJ40_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04710;old_locus_tag=DJ40_952 NZ_CP008943.1 Protein Homology CDS 1047539 1048945 . - 0 ID=cds923;Parent=gene937;Dbxref=Genbank:WP_038400047.1;Name=WP_038400047.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400047.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1048970 1049176 . - . ID=gene938;Name=DJ40_RS04715;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS04715 NZ_CP008943.1 RefSeq gene 1048970 1049137 . - . ID=gene939;Name=DJ40_RS21840;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS21840 NZ_CP008943.1 RefSeq repeat_region 1049003 1049172 . + . ID=id56;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1049212 1050709 . - . ID=gene940;Name=DJ40_RS04720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS04720;pseudo=true NZ_CP008943.1 Protein Homology CDS 1049212 1050709 . - 0 ID=cds924;Parent=gene940;exception=annotated by transcript or proteomic data;gbkey=CDS;product=coat protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1050830 1051129 . - . ID=gene941;Name=DJ40_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04725;old_locus_tag=DJ40_955 NZ_CP008943.1 Protein Homology CDS 1050830 1051129 . - 0 ID=cds925;Parent=gene941;Dbxref=Genbank:WP_002208854.1;Name=WP_002208854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208854.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1051131 1051499 . - . ID=gene942;Name=DJ40_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04730;old_locus_tag=DJ40_956 NZ_CP008943.1 Protein Homology CDS 1051131 1051499 . - 0 ID=cds926;Parent=gene942;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1051521 1053029 . - . ID=gene943;Name=DJ40_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04735;old_locus_tag=DJ40_957 NZ_CP008943.1 Protein Homology CDS 1051521 1053029 . - 0 ID=cds927;Parent=gene943;Dbxref=Genbank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;product=tail protein;protein_id=WP_002208856.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1053026 1053220 . - . ID=gene944;Name=DJ40_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04740;old_locus_tag=DJ40_958 NZ_CP008943.1 Protein Homology CDS 1053026 1053220 . - 0 ID=cds928;Parent=gene944;Dbxref=Genbank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208857.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1053225 1053794 . - . ID=gene945;Name=DJ40_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04745;old_locus_tag=DJ40_959 NZ_CP008943.1 Protein Homology CDS 1053225 1053794 . - 0 ID=cds929;Parent=gene945;Dbxref=Genbank:WP_038401576.1;Name=WP_038401576.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_038401576.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1053888 1054178 . - . ID=gene946;Name=DJ40_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04750;old_locus_tag=DJ40_960 NZ_CP008943.1 Protein Homology CDS 1053888 1054178 . - 0 ID=cds930;Parent=gene946;Dbxref=Genbank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1054809 1055603 . - . ID=gene947;Name=DJ40_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04755;old_locus_tag=DJ40_961 NZ_CP008943.1 Protein Homology CDS 1054809 1055603 . - 0 ID=cds931;Parent=gene947;Dbxref=Genbank:WP_002208860.1;Name=WP_002208860.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002208860.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1055579 1056388 . - . ID=gene948;Name=DJ40_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04760;old_locus_tag=DJ40_962 NZ_CP008943.1 Protein Homology CDS 1055579 1056388 . - 0 ID=cds932;Parent=gene948;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1056394 1057065 . - . ID=gene949;Name=DJ40_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04765;old_locus_tag=DJ40_963 NZ_CP008943.1 Protein Homology CDS 1056394 1057065 . - 0 ID=cds933;Parent=gene949;Dbxref=Genbank:WP_032466639.1;Name=WP_032466639.1;gbkey=CDS;product=aldolase;protein_id=WP_032466639.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1057122 1058426 . - . ID=gene950;Name=DJ40_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04770;old_locus_tag=DJ40_964 NZ_CP008943.1 Protein Homology CDS 1057122 1058426 . - 0 ID=cds934;Parent=gene950;Dbxref=Genbank:WP_032466197.1;Name=WP_032466197.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_032466197.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1058637 1059116 . - . ID=gene951;Name=DJ40_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04775;old_locus_tag=DJ40_965 NZ_CP008943.1 Protein Homology CDS 1058637 1059116 . - 0 ID=cds935;Parent=gene951;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1059390 1060112 . + . ID=gene952;Name=DJ40_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04780;old_locus_tag=DJ40_966 NZ_CP008943.1 Protein Homology CDS 1059390 1060112 . + 0 ID=cds936;Parent=gene952;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1060318 1060560 . + . ID=gene953;Name=DJ40_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04785;old_locus_tag=DJ40_967 NZ_CP008943.1 Protein Homology CDS 1060318 1060560 . + 0 ID=cds937;Parent=gene953;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1060732 1061667 . + . ID=gene954;Name=DJ40_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04790;old_locus_tag=DJ40_968 NZ_CP008943.1 Protein Homology CDS 1060732 1061667 . + 0 ID=cds938;Parent=gene954;Dbxref=Genbank:WP_011191999.1;Name=WP_011191999.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_011191999.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1062074 1063861 . + . ID=gene955;Name=DJ40_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04795;old_locus_tag=DJ40_969 NZ_CP008943.1 Protein Homology CDS 1062074 1063861 . + 0 ID=cds939;Parent=gene955;Dbxref=Genbank:WP_002208868.1;Name=WP_002208868.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1063935 1064924 . - . ID=gene956;Name=DJ40_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04800;old_locus_tag=DJ40_970 NZ_CP008943.1 Protein Homology CDS 1063935 1064924 . - 0 ID=cds940;Parent=gene956;Dbxref=Genbank:WP_011906349.1;Name=WP_011906349.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_011906349.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1065340 1066866 . + . ID=gene957;Name=DJ40_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04805;old_locus_tag=DJ40_971 NZ_CP008943.1 Protein Homology CDS 1065340 1066866 . + 0 ID=cds941;Parent=gene957;Dbxref=Genbank:WP_011191998.1;Name=WP_011191998.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011191998.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1066853 1067023 . - . ID=gene958;Name=DJ40_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04810 NZ_CP008943.1 Protein Homology CDS 1066853 1067023 . - 0 ID=cds942;Parent=gene958;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1067141 1068307 . + . ID=gene959;Name=DJ40_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04815;old_locus_tag=DJ40_972 NZ_CP008943.1 Protein Homology CDS 1067141 1068307 . + 0 ID=cds943;Parent=gene959;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1068495 1068570 . - . ID=gene960;Name=DJ40_RS04820;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS04820;old_locus_tag=DJ40_973 NZ_CP008943.1 tRNAscan-SE tRNA 1068495 1068570 . - . ID=rna12;Parent=gene960;anticodon=(pos:complement(1068535..1068537));gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 tRNAscan-SE exon 1068495 1068570 . - . ID=id57;Parent=rna12;anticodon=(pos:complement(1068535..1068537));gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 RefSeq gene 1068576 1068663 . - . ID=gene961;Name=DJ40_RS04825;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS04825;old_locus_tag=DJ40_974 NZ_CP008943.1 tRNAscan-SE tRNA 1068576 1068663 . - . ID=rna13;Parent=gene961;anticodon=(pos:complement(1068627..1068629));gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 tRNAscan-SE exon 1068576 1068663 . - . ID=id58;Parent=rna13;anticodon=(pos:complement(1068627..1068629));gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 RefSeq gene 1068934 1069395 . - . ID=gene962;Name=DJ40_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04830;old_locus_tag=DJ40_975 NZ_CP008943.1 Protein Homology CDS 1068934 1069395 . - 0 ID=cds944;Parent=gene962;Dbxref=Genbank:WP_012105445.1;Name=WP_012105445.1;gbkey=CDS;product=50S ribosomal protein L21;protein_id=WP_012105445.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1069543 1070151 . + . ID=gene963;Name=DJ40_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04835;old_locus_tag=DJ40_976 NZ_CP008943.1 Protein Homology CDS 1069543 1070151 . + 0 ID=cds945;Parent=gene963;Dbxref=Genbank:WP_012304343.1;Name=WP_012304343.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_012304343.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1070188 1071303 . - . ID=gene964;Name=DJ40_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04840;old_locus_tag=DJ40_977 NZ_CP008943.1 Protein Homology CDS 1070188 1071303 . - 0 ID=cds946;Parent=gene964;Dbxref=Genbank:WP_038400049.1;Name=WP_038400049.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400049.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1072407 1073561 . + . ID=gene965;Name=DJ40_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04850;old_locus_tag=DJ40_979 NZ_CP008943.1 Protein Homology CDS 1072407 1073561 . + 0 ID=cds947;Parent=gene965;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1073585 1076278 . + . ID=gene966;Name=DJ40_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04855;old_locus_tag=DJ40_980 NZ_CP008943.1 Protein Homology CDS 1073585 1076278 . + 0 ID=cds948;Parent=gene966;Dbxref=Genbank:WP_011191996.1;Name=WP_011191996.1;gbkey=CDS;product=ATPase;protein_id=WP_011191996.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1076281 1076934 . + . ID=gene967;Name=DJ40_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04860;old_locus_tag=DJ40_981 NZ_CP008943.1 Protein Homology CDS 1076281 1076934 . + 0 ID=cds949;Parent=gene967;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1077002 1079782 . - . ID=gene968;Name=DJ40_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04865;old_locus_tag=DJ40_982 NZ_CP008943.1 Protein Homology CDS 1077002 1079782 . - 0 ID=cds950;Parent=gene968;Dbxref=Genbank:WP_038400051.1;Name=WP_038400051.1;gbkey=CDS;product=histidine kinase;protein_id=WP_038400051.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1079935 1080060 . - . ID=gene969;Name=DJ40_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04870 NZ_CP008943.1 Protein Homology CDS 1079935 1080060 . - 0 ID=cds951;Parent=gene969;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1080063 1082774 . - . ID=gene970;Name=DJ40_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04875;old_locus_tag=DJ40_983 NZ_CP008943.1 Protein Homology CDS 1080063 1082774 . - 0 ID=cds952;Parent=gene970;Dbxref=Genbank:WP_038400052.1;Name=WP_038400052.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_038400052.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1083074 1083802 . + . ID=gene971;Name=DJ40_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04880;old_locus_tag=DJ40_984 NZ_CP008943.1 Protein Homology CDS 1083074 1083802 . + 0 ID=cds953;Parent=gene971;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1084296 1086584 . + . ID=gene972;Name=DJ40_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04885;old_locus_tag=DJ40_985 NZ_CP008943.1 Protein Homology CDS 1084296 1086584 . + 0 ID=cds954;Parent=gene972;Dbxref=Genbank:WP_011191994.1;Name=WP_011191994.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_011191994.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1086746 1087876 . + . ID=gene973;Name=DJ40_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04890;old_locus_tag=DJ40_986 NZ_CP008943.1 Protein Homology CDS 1086746 1087876 . + 0 ID=cds955;Parent=gene973;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1087880 1088137 . + . ID=gene974;Name=DJ40_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04895;old_locus_tag=DJ40_987 NZ_CP008943.1 Protein Homology CDS 1087880 1088137 . + 0 ID=cds956;Parent=gene974;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1088172 1088681 . + . ID=gene975;Name=DJ40_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04900;old_locus_tag=DJ40_988 NZ_CP008943.1 Protein Homology CDS 1088172 1088681 . + 0 ID=cds957;Parent=gene975;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1088739 1089932 . - . ID=gene976;Name=DJ40_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04905;old_locus_tag=DJ40_989 NZ_CP008943.1 Protein Homology CDS 1088739 1089932 . - 0 ID=cds958;Parent=gene976;Dbxref=Genbank:WP_011191993.1;Name=WP_011191993.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191993.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1090553 1091761 . + . ID=gene977;Name=DJ40_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04910;old_locus_tag=DJ40_990 NZ_CP008943.1 Protein Homology CDS 1090553 1091761 . + 0 ID=cds959;Parent=gene977;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1091997 1092539 . - . ID=gene978;Name=DJ40_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04915;old_locus_tag=DJ40_991 NZ_CP008943.1 Protein Homology CDS 1091997 1092539 . - 0 ID=cds960;Parent=gene978;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1092897 1094333 . + . ID=gene979;Name=DJ40_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04920;old_locus_tag=DJ40_992 NZ_CP008943.1 Protein Homology CDS 1092897 1094333 . + 0 ID=cds961;Parent=gene979;Dbxref=Genbank:WP_038400053.1;Name=WP_038400053.1;gbkey=CDS;product=catalase;protein_id=WP_038400053.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1094406 1096586 . - . ID=gene980;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=DJ40_RS04925;old_locus_tag=DJ40_993 NZ_CP008943.1 Protein Homology CDS 1094406 1096586 . - 0 ID=cds962;Parent=gene980;Dbxref=Genbank:WP_011191991.1;Name=WP_011191991.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_011191991.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1096856 1097971 . + . ID=gene981;Name=DJ40_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04930;old_locus_tag=DJ40_994 NZ_CP008943.1 Protein Homology CDS 1096856 1097971 . + 0 ID=cds963;Parent=gene981;Dbxref=Genbank:WP_011191990.1;Name=WP_011191990.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_011191990.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1098383 1099273 . + . ID=gene982;Name=DJ40_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04935;old_locus_tag=DJ40_995 NZ_CP008943.1 Protein Homology CDS 1098383 1099273 . + 0 ID=cds964;Parent=gene982;Dbxref=Genbank:WP_011191989.1;Name=WP_011191989.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_011191989.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1099398 1099616 . + . ID=gene983;Name=DJ40_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04940;old_locus_tag=DJ40_996 NZ_CP008943.1 Protein Homology CDS 1099398 1099616 . + 0 ID=cds965;Parent=gene983;Dbxref=Genbank:WP_011191988.1;Name=WP_011191988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191988.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1099734 1102040 . - . ID=gene984;Name=DJ40_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04945;old_locus_tag=DJ40_997 NZ_CP008943.1 Protein Homology CDS 1099734 1102040 . - 0 ID=cds966;Parent=gene984;Dbxref=Genbank:WP_011191987.1;Name=WP_011191987.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_011191987.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1102110 1103444 . - . ID=gene985;Name=DJ40_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04950;old_locus_tag=DJ40_998 NZ_CP008943.1 Protein Homology CDS 1102110 1103444 . - 0 ID=cds967;Parent=gene985;Dbxref=Genbank:WP_011191986.1;Name=WP_011191986.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_011191986.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1103970 1104806 . - . ID=gene986;Name=DJ40_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04955;old_locus_tag=DJ40_999 NZ_CP008943.1 Protein Homology CDS 1103970 1104806 . - 0 ID=cds968;Parent=gene986;Dbxref=Genbank:WP_042592585.1;Name=WP_042592585.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_042592585.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1104803 1105741 . - . ID=gene987;Name=DJ40_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04960;old_locus_tag=DJ40_1000 NZ_CP008943.1 Protein Homology CDS 1104803 1105741 . - 0 ID=cds969;Parent=gene987;Dbxref=Genbank:WP_002210802.1;Name=WP_002210802.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210802.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1105738 1106892 . - . ID=gene988;Name=DJ40_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04965;old_locus_tag=DJ40_1001 NZ_CP008943.1 Protein Homology CDS 1105738 1106892 . - 0 ID=cds970;Parent=gene988;Dbxref=Genbank:WP_038400054.1;Name=WP_038400054.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_038400054.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1107153 1108085 . - . ID=gene989;Name=DJ40_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04970;old_locus_tag=DJ40_1002 NZ_CP008943.1 Protein Homology CDS 1107153 1108085 . - 0 ID=cds971;Parent=gene989;Dbxref=Genbank:WP_011191984.1;Name=WP_011191984.1;gbkey=CDS;product=osmoprotectant uptake system substrate-binding protein;protein_id=WP_011191984.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1108821 1109675 . + . ID=gene990;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=DJ40_RS04975;old_locus_tag=DJ40_1003 NZ_CP008943.1 Protein Homology CDS 1108821 1109675 . + 0 ID=cds972;Parent=gene990;Dbxref=Genbank:WP_002210799.1;Name=WP_002210799.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002210799.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1109816 1111231 . - . ID=gene991;Name=DJ40_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04980;old_locus_tag=DJ40_1004 NZ_CP008943.1 Protein Homology CDS 1109816 1111231 . - 0 ID=cds973;Parent=gene991;Dbxref=Genbank:WP_038400055.1;Name=WP_038400055.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_038400055.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1111255 1112112 . - . ID=gene992;Name=DJ40_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04985;old_locus_tag=DJ40_1005 NZ_CP008943.1 Protein Homology CDS 1111255 1112112 . - 0 ID=cds974;Parent=gene992;Dbxref=Genbank:WP_024063402.1;Name=WP_024063402.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063402.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1112227 1112925 . - . ID=gene993;Name=DJ40_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04990;old_locus_tag=DJ40_1006 NZ_CP008943.1 Protein Homology CDS 1112227 1112925 . - 0 ID=cds975;Parent=gene993;Dbxref=Genbank:WP_012304351.1;Name=WP_012304351.1;gbkey=CDS;product=urea ABC transporter ATP-binding protein;protein_id=WP_012304351.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1113019 1113855 . - . ID=gene994;Name=DJ40_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS04995;old_locus_tag=DJ40_1007 NZ_CP008943.1 Protein Homology CDS 1113019 1113855 . - 0 ID=cds976;Parent=gene994;Dbxref=Genbank:WP_011191979.1;Name=WP_011191979.1;gbkey=CDS;product=urea ABC transporter ATP-binding protein;protein_id=WP_011191979.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1113852 1114928 . - . ID=gene995;Name=DJ40_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05000;old_locus_tag=DJ40_1008 NZ_CP008943.1 Protein Homology CDS 1113852 1114928 . - 0 ID=cds977;Parent=gene995;Dbxref=Genbank:WP_002210794.1;Name=WP_002210794.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002210794.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1114928 1116529 . - . ID=gene996;Name=DJ40_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05005;old_locus_tag=DJ40_1009 NZ_CP008943.1 Protein Homology CDS 1114928 1116529 . - 0 ID=cds978;Parent=gene996;Dbxref=Genbank:WP_042592587.1;Name=WP_042592587.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_042592587.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1116653 1117921 . - . ID=gene997;Name=DJ40_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05010;old_locus_tag=DJ40_1010 NZ_CP008943.1 Protein Homology CDS 1116653 1117921 . - 0 ID=cds979;Parent=gene997;Dbxref=Genbank:WP_038400057.1;Name=WP_038400057.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_038400057.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1118397 1118870 . - . ID=gene998;Name=DJ40_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05015;old_locus_tag=DJ40_1011 NZ_CP008943.1 Protein Homology CDS 1118397 1118870 . - 0 ID=cds980;Parent=gene998;Dbxref=Genbank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210791.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1119115 1119996 . - . ID=gene999;Name=DJ40_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05020;old_locus_tag=DJ40_1012 NZ_CP008943.1 Protein Homology CDS 1119115 1119996 . - 0 ID=cds981;Parent=gene999;Dbxref=Genbank:WP_024063404.1;Name=WP_024063404.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_024063404.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1119999 1120859 . - . ID=gene1000;Name=DJ40_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05025;old_locus_tag=DJ40_1013 NZ_CP008943.1 Protein Homology CDS 1119999 1120859 . - 0 ID=cds982;Parent=gene1000;Dbxref=Genbank:WP_012304354.1;Name=WP_012304354.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_012304354.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1120963 1121892 . - . ID=gene1001;Name=DJ40_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05030;old_locus_tag=DJ40_1014 NZ_CP008943.1 Protein Homology CDS 1120963 1121892 . - 0 ID=cds983;Parent=gene1001;Dbxref=Genbank:WP_038400058.1;Name=WP_038400058.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_038400058.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1121929 1122765 . - . ID=gene1002;Name=DJ40_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05035;old_locus_tag=DJ40_1015 NZ_CP008943.1 Protein Homology CDS 1121929 1122765 . - 0 ID=cds984;Parent=gene1002;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1122973 1123221 . - . ID=gene1003;Name=DJ40_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05040;old_locus_tag=DJ40_1016 NZ_CP008943.1 Protein Homology CDS 1122973 1123221 . - 0 ID=cds985;Parent=gene1003;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1123406 1124509 . - . ID=gene1004;Name=DJ40_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05045;old_locus_tag=DJ40_1017 NZ_CP008943.1 Protein Homology CDS 1123406 1124509 . - 0 ID=cds986;Parent=gene1004;Dbxref=Genbank:WP_011191976.1;Name=WP_011191976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191976.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1124822 1125163 . + . ID=gene1005;Name=DJ40_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05050;old_locus_tag=DJ40_1018 NZ_CP008943.1 Protein Homology CDS 1124822 1125163 . + 0 ID=cds987;Parent=gene1005;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1125189 1125728 . - . ID=gene1006;Name=DJ40_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05055;old_locus_tag=DJ40_1019 NZ_CP008943.1 Protein Homology CDS 1125189 1125728 . - 0 ID=cds988;Parent=gene1006;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1125938 1127650 . + . ID=gene1007;Name=DJ40_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05060;old_locus_tag=DJ40_1020 NZ_CP008943.1 Protein Homology CDS 1125938 1127650 . + 0 ID=cds989;Parent=gene1007;Dbxref=Genbank:WP_038400059.1;Name=WP_038400059.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_038400059.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1127771 1128706 . - . ID=gene1008;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=DJ40_RS05065;old_locus_tag=DJ40_1021 NZ_CP008943.1 Protein Homology CDS 1127771 1128706 . - 0 ID=cds990;Parent=gene1008;Dbxref=Genbank:WP_038401578.1;Name=WP_038401578.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_038401578.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1129045 1129224 . + . ID=gene1009;Name=DJ40_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05070;old_locus_tag=DJ40_1022 NZ_CP008943.1 Protein Homology CDS 1129045 1129224 . + 0 ID=cds991;Parent=gene1009;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1129298 1130236 . - . ID=gene1010;Name=DJ40_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05075;old_locus_tag=DJ40_1023 NZ_CP008943.1 Protein Homology CDS 1129298 1130236 . - 0 ID=cds992;Parent=gene1010;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1130536 1130823 . - . ID=gene1011;Name=DJ40_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05080 NZ_CP008943.1 Protein Homology CDS 1130536 1130823 . - 0 ID=cds993;Parent=gene1011;Dbxref=Genbank:WP_038401580.1;Name=WP_038401580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401580.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1131059 1131454 . - . ID=gene1012;Name=DJ40_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21845 NZ_CP008943.1 Protein Homology CDS 1131059 1131454 . - 0 ID=cds994;Parent=gene1012;Dbxref=Genbank:WP_049862774.1;Name=WP_049862774.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1131826 1133181 . - . ID=gene1013;Name=DJ40_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05090;old_locus_tag=DJ40_1027 NZ_CP008943.1 Protein Homology CDS 1131826 1133181 . - 0 ID=cds995;Parent=gene1013;Dbxref=Genbank:WP_002220152.1;Name=WP_002220152.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_002220152.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1133572 1134282 . + . ID=gene1014;Name=DJ40_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05095;old_locus_tag=DJ40_1028 NZ_CP008943.1 Protein Homology CDS 1133572 1134282 . + 0 ID=cds996;Parent=gene1014;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1134334 1135320 . + . ID=gene1015;Name=DJ40_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05100;old_locus_tag=DJ40_1029 NZ_CP008943.1 Protein Homology CDS 1134334 1135320 . + 0 ID=cds997;Parent=gene1015;Dbxref=Genbank:WP_011191973.1;Name=WP_011191973.1;gbkey=CDS;product=transporter;protein_id=WP_011191973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1135334 1137076 . + . ID=gene1016;Name=DJ40_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05105;old_locus_tag=DJ40_1030 NZ_CP008943.1 Protein Homology CDS 1135334 1137076 . + 0 ID=cds998;Parent=gene1016;Dbxref=Genbank:WP_011191972.1;Name=WP_011191972.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191972.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1137081 1138256 . + . ID=gene1017;Name=DJ40_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05110;old_locus_tag=DJ40_1031 NZ_CP008943.1 Protein Homology CDS 1137081 1138256 . + 0 ID=cds999;Parent=gene1017;Dbxref=Genbank:WP_002230687.1;Name=WP_002230687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230687.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1138269 1139375 . + . ID=gene1018;Name=DJ40_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05115;old_locus_tag=DJ40_1032 NZ_CP008943.1 Protein Homology CDS 1138269 1139375 . + 0 ID=cds1000;Parent=gene1018;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1139414 1139740 . - . ID=gene1019;Name=DJ40_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05120;old_locus_tag=DJ40_1033 NZ_CP008943.1 Protein Homology CDS 1139414 1139740 . - 0 ID=cds1001;Parent=gene1019;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1139751 1139978 . - . ID=gene1020;Name=DJ40_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05125 NZ_CP008943.1 Protein Homology CDS 1139751 1139978 . - 0 ID=cds1002;Parent=gene1020;Dbxref=Genbank:WP_038400060.1;Name=WP_038400060.1;gbkey=CDS;product=5%2C10-methylene tetrahydromethanopterin reductase;protein_id=WP_038400060.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1140310 1141221 . + . ID=gene1021;Name=DJ40_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05130;old_locus_tag=DJ40_1035 NZ_CP008943.1 Protein Homology CDS 1140310 1141221 . + 0 ID=cds1003;Parent=gene1021;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1141222 1142331 . - . ID=gene1022;Name=DJ40_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05135;old_locus_tag=DJ40_1034 NZ_CP008943.1 Protein Homology CDS 1141222 1142331 . - 0 ID=cds1004;Parent=gene1022;Dbxref=Genbank:WP_011191971.1;Name=WP_011191971.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_011191971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1142679 1144043 . - . ID=gene1023;Name=DJ40_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05140;old_locus_tag=DJ40_1036 NZ_CP008943.1 Protein Homology CDS 1142679 1144043 . - 0 ID=cds1005;Parent=gene1023;Dbxref=Genbank:WP_011191970.1;Name=WP_011191970.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_011191970.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1144030 1145844 . - . ID=gene1024;Name=DJ40_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05145;old_locus_tag=DJ40_1037 NZ_CP008943.1 Protein Homology CDS 1144030 1145844 . - 0 ID=cds1006;Parent=gene1024;Dbxref=Genbank:WP_011191969.1;Name=WP_011191969.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_011191969.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1146194 1146667 . + . ID=gene1025;Name=DJ40_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05150;old_locus_tag=DJ40_1038 NZ_CP008943.1 Protein Homology CDS 1146194 1146667 . + 0 ID=cds1007;Parent=gene1025;Dbxref=Genbank:WP_011191968.1;Name=WP_011191968.1;gbkey=CDS;product=zinc resistance-associated protein;protein_id=WP_011191968.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1146755 1148011 . - . ID=gene1026;Name=DJ40_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05155;old_locus_tag=DJ40_1039 NZ_CP008943.1 Protein Homology CDS 1146755 1148011 . - 0 ID=cds1008;Parent=gene1026;Dbxref=Genbank:WP_011191967.1;Name=WP_011191967.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_011191967.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1148150 1149013 . - . ID=gene1027;Name=DJ40_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05160;old_locus_tag=DJ40_1040 NZ_CP008943.1 Protein Homology CDS 1148150 1149013 . - 0 ID=cds1009;Parent=gene1027;Dbxref=Genbank:WP_011191966.1;Name=WP_011191966.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_011191966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1149359 1150207 . + . ID=gene1028;Name=DJ40_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05165;old_locus_tag=DJ40_1041 NZ_CP008943.1 Protein Homology CDS 1149359 1150207 . + 0 ID=cds1010;Parent=gene1028;Dbxref=Genbank:WP_038400062.1;Name=WP_038400062.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_038400062.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1150245 1151138 . - . ID=gene1029;Name=DJ40_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05170;old_locus_tag=DJ40_1042 NZ_CP008943.1 Protein Homology CDS 1150245 1151138 . - 0 ID=cds1011;Parent=gene1029;Dbxref=Genbank:WP_038400063.1;Name=WP_038400063.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_038400063.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1151379 1153427 . - . ID=gene1030;Name=DJ40_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05175;old_locus_tag=DJ40_1043 NZ_CP008943.1 Protein Homology CDS 1151379 1153427 . - 0 ID=cds1012;Parent=gene1030;Dbxref=Genbank:WP_011191964.1;Name=WP_011191964.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_011191964.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1153793 1154389 . + . ID=gene1031;Name=DJ40_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05180;old_locus_tag=DJ40_1044 NZ_CP008943.1 Protein Homology CDS 1153793 1154389 . + 0 ID=cds1013;Parent=gene1031;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1154447 1155919 . + . ID=gene1032;Name=DJ40_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05185;old_locus_tag=DJ40_1045 NZ_CP008943.1 Protein Homology CDS 1154447 1155919 . + 0 ID=cds1014;Parent=gene1032;Dbxref=Genbank:WP_038400064.1;Name=WP_038400064.1;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_038400064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1155942 1157645 . + . ID=gene1033;Name=DJ40_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05190;old_locus_tag=DJ40_1046 NZ_CP008943.1 Protein Homology CDS 1155942 1157645 . + 0 ID=cds1015;Parent=gene1033;Dbxref=Genbank:WP_024063412.1;Name=WP_024063412.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=choline dehydrogenase;protein_id=WP_024063412.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1157856 1158566 . - . ID=gene1034;Name=DJ40_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05195;old_locus_tag=DJ40_1047 NZ_CP008943.1 Protein Homology CDS 1157856 1158566 . - 0 ID=cds1016;Parent=gene1034;Dbxref=Genbank:WP_011191961.1;Name=WP_011191961.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191961.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1158709 1159161 . - . ID=gene1035;Name=DJ40_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05200;old_locus_tag=DJ40_1048 NZ_CP008943.1 Protein Homology CDS 1158709 1159161 . - 0 ID=cds1017;Parent=gene1035;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1159164 1159409 . - . ID=gene1036;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=DJ40_RS05205;old_locus_tag=DJ40_1049 NZ_CP008943.1 Protein Homology CDS 1159164 1159409 . - 0 ID=cds1018;Parent=gene1036;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1159406 1159885 . - . ID=gene1037;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=DJ40_RS05210;old_locus_tag=DJ40_1050 NZ_CP008943.1 Protein Homology CDS 1159406 1159885 . - 0 ID=cds1019;Parent=gene1037;Dbxref=Genbank:WP_002210772.1;Name=WP_002210772.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_002210772.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1159902 1160215 . + . ID=id59;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1160228 1161208 . - . ID=gene1038;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=DJ40_RS05215;old_locus_tag=DJ40_1051 NZ_CP008943.1 Protein Homology CDS 1160228 1161208 . - 0 ID=cds1020;Parent=gene1038;Dbxref=Genbank:WP_024063414.1;Name=WP_024063414.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_024063414.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1161460 1161606 . + . ID=gene1039;Name=DJ40_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05220;old_locus_tag=DJ40_1052 NZ_CP008943.1 Protein Homology CDS 1161460 1161606 . + 0 ID=cds1021;Parent=gene1039;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1161740 1162663 . + . ID=gene1040;Name=DJ40_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05225;old_locus_tag=DJ40_1053 NZ_CP008943.1 Protein Homology CDS 1161740 1162663 . + 0 ID=cds1022;Parent=gene1040;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1162794 1163039 . - . ID=gene1041;Name=DJ40_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05230;old_locus_tag=DJ40_1054 NZ_CP008943.1 Protein Homology CDS 1162794 1163039 . - 0 ID=cds1023;Parent=gene1041;Dbxref=Genbank:WP_002210768.1;Name=WP_002210768.1;gbkey=CDS;product=transporter;protein_id=WP_002210768.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1163331 1165346 . - . ID=gene1042;Name=DJ40_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05235;old_locus_tag=DJ40_1055 NZ_CP008943.1 Protein Homology CDS 1163331 1165346 . - 0 ID=cds1024;Parent=gene1042;Dbxref=Genbank:WP_011191959.1;Name=WP_011191959.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_011191959.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1166437 1167147 . + . ID=gene1043;Name=DJ40_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05240;old_locus_tag=DJ40_1056 NZ_CP008943.1 Protein Homology CDS 1166437 1167147 . + 0 ID=cds1025;Parent=gene1043;Dbxref=Genbank:WP_002210766.1;Name=WP_002210766.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210766.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1167336 1168058 . - . ID=gene1044;Name=DJ40_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05245;old_locus_tag=DJ40_1057 NZ_CP008943.1 Protein Homology CDS 1167336 1168058 . - 0 ID=cds1026;Parent=gene1044;Dbxref=Genbank:WP_002216554.1;Name=WP_002216554.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002216554.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1168051 1168854 . - . ID=gene1045;Name=DJ40_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05250;old_locus_tag=DJ40_1058 NZ_CP008943.1 Protein Homology CDS 1168051 1168854 . - 0 ID=cds1027;Parent=gene1045;Dbxref=Genbank:WP_024063415.1;Name=WP_024063415.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_024063415.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1168838 1169989 . - . ID=gene1046;Name=DJ40_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05255;old_locus_tag=DJ40_1059 NZ_CP008943.1 Protein Homology CDS 1168838 1169989 . - 0 ID=cds1028;Parent=gene1046;Dbxref=Genbank:WP_011191957.1;Name=WP_011191957.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_011191957.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1169989 1171026 . - . ID=gene1047;Name=DJ40_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05260;old_locus_tag=DJ40_1060 NZ_CP008943.1 Protein Homology CDS 1169989 1171026 . - 0 ID=cds1029;Parent=gene1047;Dbxref=Genbank:WP_002210762.1;Name=WP_002210762.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_002210762.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1171125 1172405 . + . ID=gene1048;Name=DJ40_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05265;old_locus_tag=DJ40_1061 NZ_CP008943.1 Protein Homology CDS 1171125 1172405 . + 0 ID=cds1030;Parent=gene1048;Dbxref=Genbank:WP_038400065.1;Name=WP_038400065.1;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_038400065.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1172591 1173595 . - . ID=gene1049;Name=DJ40_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05270;old_locus_tag=DJ40_1062 NZ_CP008943.1 Protein Homology CDS 1172591 1173595 . - 0 ID=cds1031;Parent=gene1049;Dbxref=Genbank:WP_011191955.1;Name=WP_011191955.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_011191955.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1173886 1174707 . + . ID=gene1050;Name=DJ40_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05275;old_locus_tag=DJ40_1063 NZ_CP008943.1 Protein Homology CDS 1173886 1174707 . + 0 ID=cds1032;Parent=gene1050;Dbxref=Genbank:WP_012304377.1;Name=WP_012304377.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_012304377.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1174764 1175843 . - . ID=gene1051;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=DJ40_RS05280;old_locus_tag=DJ40_1064 NZ_CP008943.1 Protein Homology CDS 1174764 1175843 . - 0 ID=cds1033;Parent=gene1051;Dbxref=Genbank:WP_038400066.1;Name=WP_038400066.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdate transporter ATP-binding protein;protein_id=WP_038400066.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1175837 1176532 . - . ID=gene1052;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=DJ40_RS05285;old_locus_tag=DJ40_1065 NZ_CP008943.1 Protein Homology CDS 1175837 1176532 . - 0 ID=cds1034;Parent=gene1052;Dbxref=Genbank:WP_038400067.1;Name=WP_038400067.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_038400067.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1176532 1177311 . - . ID=gene1053;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=DJ40_RS05290;old_locus_tag=DJ40_1066 NZ_CP008943.1 Protein Homology CDS 1176532 1177311 . - 0 ID=cds1035;Parent=gene1053;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1177546 1177698 . - . ID=gene1054;Name=DJ40_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05295;old_locus_tag=DJ40_1067 NZ_CP008943.1 Protein Homology CDS 1177546 1177698 . - 0 ID=cds1036;Parent=gene1054;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1177930 1178721 . + . ID=gene1055;Name=DJ40_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05300;old_locus_tag=DJ40_1068 NZ_CP008943.1 Protein Homology CDS 1177930 1178721 . + 0 ID=cds1037;Parent=gene1055;Dbxref=Genbank:WP_002210754.1;Name=WP_002210754.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_002210754.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1178831 1180321 . + . ID=gene1056;Name=DJ40_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05305;old_locus_tag=DJ40_1069 NZ_CP008943.1 Protein Homology CDS 1178831 1180321 . + 0 ID=cds1038;Parent=gene1056;Dbxref=Genbank:WP_024063421.1;Name=WP_024063421.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_024063421.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1180355 1180483 . + . ID=gene1057;Name=DJ40_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05310;old_locus_tag=DJ40_1070 NZ_CP008943.1 Protein Homology CDS 1180355 1180483 . + 0 ID=cds1039;Parent=gene1057;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1180538 1181356 . + . ID=gene1058;Name=DJ40_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05315;old_locus_tag=DJ40_1071 NZ_CP008943.1 Protein Homology CDS 1180538 1181356 . + 0 ID=cds1040;Parent=gene1058;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1181716 1182732 . + . ID=gene1059;Name=DJ40_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05320;old_locus_tag=DJ40_1072 NZ_CP008943.1 Protein Homology CDS 1181716 1182732 . + 0 ID=cds1041;Parent=gene1059;Dbxref=Genbank:WP_002230680.1;Name=WP_002230680.1;gbkey=CDS;product=UDP-galactose-4-epimerase;protein_id=WP_002230680.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1182742 1183794 . + . ID=gene1060;Name=DJ40_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05325;old_locus_tag=DJ40_1073 NZ_CP008943.1 Protein Homology CDS 1182742 1183794 . + 0 ID=cds1042;Parent=gene1060;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1183791 1184942 . + . ID=gene1061;Name=DJ40_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05330;old_locus_tag=DJ40_1074 NZ_CP008943.1 Protein Homology CDS 1183791 1184942 . + 0 ID=cds1043;Parent=gene1061;Dbxref=Genbank:WP_002210748.1;Name=WP_002210748.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1184936 1186006 . + . ID=gene1062;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=DJ40_RS05335;old_locus_tag=DJ40_1075 NZ_CP008943.1 Protein Homology CDS 1184936 1186006 . + 0 ID=cds1044;Parent=gene1062;Dbxref=Genbank:WP_038400069.1;Name=WP_038400069.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_038400069.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1186299 1186634 . + . ID=gene1063;Name=DJ40_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05340;old_locus_tag=DJ40_1076 NZ_CP008943.1 Protein Homology CDS 1186299 1186634 . + 0 ID=cds1045;Parent=gene1063;Dbxref=Genbank:WP_011191948.1;Name=WP_011191948.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_011191948.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1186981 1187733 . + . ID=gene1064;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=DJ40_RS05345;old_locus_tag=DJ40_1077 NZ_CP008943.1 Protein Homology CDS 1186981 1187733 . + 0 ID=cds1046;Parent=gene1064;Dbxref=Genbank:WP_002210746.1;Name=WP_002210746.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1187915 1188967 . - . ID=gene1065;Name=DJ40_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05350;old_locus_tag=DJ40_1078 NZ_CP008943.1 Protein Homology CDS 1187915 1188967 . - 0 ID=cds1047;Parent=gene1065;Dbxref=Genbank:WP_002223549.1;Name=WP_002223549.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002223549.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1189434 1190372 . + . ID=gene1066;Name=DJ40_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05355;old_locus_tag=DJ40_1080 NZ_CP008943.1 Protein Homology CDS 1189434 1190372 . + 0 ID=cds1048;Parent=gene1066;Dbxref=Genbank:WP_002210743.1;Name=WP_002210743.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_002210743.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1190487 1191212 . - . ID=gene1067;Name=DJ40_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05360;old_locus_tag=DJ40_1081 NZ_CP008943.1 Protein Homology CDS 1190487 1191212 . - 0 ID=cds1049;Parent=gene1067;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1191334 1192395 . - . ID=gene1068;Name=DJ40_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05365;old_locus_tag=DJ40_1082 NZ_CP008943.1 Protein Homology CDS 1191334 1192395 . - 0 ID=cds1050;Parent=gene1068;Dbxref=Genbank:WP_002210741.1;Name=WP_002210741.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002210741.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1192472 1192714 . + . ID=gene1069;Name=DJ40_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05370 NZ_CP008943.1 Protein Homology CDS 1192472 1192714 . + 0 ID=cds1051;Parent=gene1069;Dbxref=Genbank:WP_038400071.1;Name=WP_038400071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400071.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1192777 1193040 . + . ID=id60;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1192862 1192937 . - . ID=gene1070;Name=DJ40_RS05375;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05375;old_locus_tag=DJ40_1084 NZ_CP008943.1 tRNAscan-SE tRNA 1192862 1192937 . - . ID=rna14;Parent=gene1070;anticodon=(pos:complement(1192902..1192904));gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 tRNAscan-SE exon 1192862 1192937 . - . ID=id61;Parent=rna14;anticodon=(pos:complement(1192902..1192904));gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 RefSeq gene 1192965 1193040 . - . ID=gene1071;Name=DJ40_RS05380;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05380;old_locus_tag=DJ40_1085 NZ_CP008943.1 tRNAscan-SE tRNA 1192965 1193040 . - . ID=rna15;Parent=gene1071;anticodon=(pos:complement(1193005..1193007));gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 tRNAscan-SE exon 1192965 1193040 . - . ID=id62;Parent=rna15;anticodon=(pos:complement(1193005..1193007));gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 RefSeq gene 1193231 1194040 . - . ID=gene1072;Name=DJ40_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05385;old_locus_tag=DJ40_1086 NZ_CP008943.1 Protein Homology CDS 1193231 1194040 . - 0 ID=cds1052;Parent=gene1072;Dbxref=Genbank:WP_038400072.1;Name=WP_038400072.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein;protein_id=WP_038400072.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1194050 1194556 . - . ID=gene1073;Name=DJ40_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05390;old_locus_tag=DJ40_1087 NZ_CP008943.1 Protein Homology CDS 1194050 1194556 . - 0 ID=cds1053;Parent=gene1073;Dbxref=Genbank:WP_011191946.1;Name=WP_011191946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191946.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1194607 1195899 . - . ID=gene1074;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=DJ40_RS05395;old_locus_tag=DJ40_1088 NZ_CP008943.1 Protein Homology CDS 1194607 1195899 . - 0 ID=cds1054;Parent=gene1074;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1196019 1197185 . - . ID=gene1075;Name=DJ40_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05400;old_locus_tag=DJ40_1089 NZ_CP008943.1 Protein Homology CDS 1196019 1197185 . - 0 ID=cds1055;Parent=gene1075;Dbxref=Genbank:WP_002210737.1;Name=WP_002210737.1;gbkey=CDS;product=cell envelope integrity/translocation protein TolA;protein_id=WP_002210737.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1197297 1197725 . - . ID=gene1076;Name=DJ40_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05405;old_locus_tag=DJ40_1090 NZ_CP008943.1 Protein Homology CDS 1197297 1197725 . - 0 ID=cds1056;Parent=gene1076;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1197738 1198424 . - . ID=gene1077;Name=DJ40_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05410;old_locus_tag=DJ40_1091 NZ_CP008943.1 Protein Homology CDS 1197738 1198424 . - 0 ID=cds1057;Parent=gene1077;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1198424 1198825 . - . ID=gene1078;Name=DJ40_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05415;old_locus_tag=DJ40_1092 NZ_CP008943.1 Protein Homology CDS 1198424 1198825 . - 0 ID=cds1058;Parent=gene1078;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1198957 1199244 . - . ID=gene1079;Name=DJ40_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05420;old_locus_tag=DJ40_1093 NZ_CP008943.1 Protein Homology CDS 1198957 1199244 . - 0 ID=cds1059;Parent=gene1079;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1199234 1199368 . - . ID=gene1080;Name=DJ40_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05425;old_locus_tag=DJ40_1094 NZ_CP008943.1 Protein Homology CDS 1199234 1199368 . - 0 ID=cds1060;Parent=gene1080;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1199381 1200520 . - . ID=gene1081;Name=DJ40_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05430;old_locus_tag=DJ40_1095 NZ_CP008943.1 Protein Homology CDS 1199381 1200520 . - 0 ID=cds1061;Parent=gene1081;Dbxref=Genbank:WP_002210731.1;Name=WP_002210731.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1200535 1202103 . - . ID=gene1082;Name=DJ40_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05435;old_locus_tag=DJ40_1096 NZ_CP008943.1 Protein Homology CDS 1200535 1202103 . - 0 ID=cds1062;Parent=gene1082;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1202870 1203742 . - . ID=gene1083;Name=DJ40_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05440;old_locus_tag=DJ40_1097 NZ_CP008943.1 Protein Homology CDS 1202870 1203742 . - 0 ID=cds1063;Parent=gene1083;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1203742 1204908 . - . ID=gene1084;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=DJ40_RS05445;old_locus_tag=DJ40_1098 NZ_CP008943.1 Protein Homology CDS 1203742 1204908 . - 0 ID=cds1064;Parent=gene1084;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1205021 1206244 . - . ID=gene1085;Name=DJ40_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05450;old_locus_tag=DJ40_1099 NZ_CP008943.1 Protein Homology CDS 1205021 1206244 . - 0 ID=cds1065;Parent=gene1085;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1206274 1209081 . - . ID=gene1086;Name=DJ40_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05455;old_locus_tag=DJ40_1100 NZ_CP008943.1 Protein Homology CDS 1206274 1209081 . - 0 ID=cds1066;Parent=gene1086;Dbxref=Genbank:WP_038400073.1;Name=WP_038400073.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase;protein_id=WP_038400073.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1209437 1210153 . - . ID=gene1087;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=DJ40_RS05460;old_locus_tag=DJ40_1101 NZ_CP008943.1 Protein Homology CDS 1209437 1210153 . - 0 ID=cds1067;Parent=gene1087;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1210203 1211969 . - . ID=gene1088;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=DJ40_RS05465;old_locus_tag=DJ40_1102 NZ_CP008943.1 Protein Homology CDS 1210203 1211969 . - 0 ID=cds1068;Parent=gene1088;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1211970 1212317 . - . ID=gene1089;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=DJ40_RS05470;old_locus_tag=DJ40_1103 NZ_CP008943.1 Protein Homology CDS 1211970 1212317 . - 0 ID=cds1069;Parent=gene1089;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1212311 1212700 . - . ID=gene1090;Name=DJ40_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05475 NZ_CP008943.1 Protein Homology CDS 1212311 1212700 . - 0 ID=cds1070;Parent=gene1090;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1213410 1214690 . + . ID=gene1091;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=DJ40_RS05480;old_locus_tag=DJ40_1105 NZ_CP008943.1 Protein Homology CDS 1213410 1214690 . + 0 ID=cds1071;Parent=gene1091;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1214798 1215376 . - . ID=gene1092;Name=DJ40_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05485;old_locus_tag=DJ40_1106 NZ_CP008943.1 Protein Homology CDS 1214798 1215376 . - 0 ID=cds1072;Parent=gene1092;Dbxref=Genbank:WP_002224622.1;Name=WP_002224622.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002224622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1215500 1216381 . + . ID=gene1093;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=DJ40_RS05490;old_locus_tag=DJ40_1107 NZ_CP008943.1 Protein Homology CDS 1215500 1216381 . + 0 ID=cds1073;Parent=gene1093;Dbxref=Genbank:WP_002210719.1;Name=WP_002210719.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_002210719.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1216468 1218129 . + . ID=gene1094;Name=DJ40_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05495;old_locus_tag=DJ40_1108 NZ_CP008943.1 Protein Homology CDS 1216468 1218129 . + 0 ID=cds1074;Parent=gene1094;Dbxref=Genbank:WP_002210718.1;Name=WP_002210718.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_002210718.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1218243 1218584 . + . ID=gene1095;Name=DJ40_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05500;old_locus_tag=DJ40_1109 NZ_CP008943.1 Protein Homology CDS 1218243 1218584 . + 0 ID=cds1075;Parent=gene1095;Dbxref=Genbank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_002210717.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1218734 1219018 . - . ID=gene1096;Name=DJ40_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05505;old_locus_tag=DJ40_1110 NZ_CP008943.1 Protein Homology CDS 1218734 1219018 . - 0 ID=cds1076;Parent=gene1096;Dbxref=Genbank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;product=protein RnfH;protein_id=WP_002210716.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1219011 1219445 . - . ID=gene1097;Name=DJ40_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05510;old_locus_tag=DJ40_1111 NZ_CP008943.1 Protein Homology CDS 1219011 1219445 . - 0 ID=cds1077;Parent=gene1097;Dbxref=Genbank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210715.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1219606 1220088 . + . ID=gene1098;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=DJ40_RS05515;old_locus_tag=DJ40_1112 NZ_CP008943.1 Protein Homology CDS 1219606 1220088 . + 0 ID=cds1078;Parent=gene1098;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1220666 1221895 . + . ID=gene1099;Name=DJ40_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05520;old_locus_tag=DJ40_1113 NZ_CP008943.1 Protein Homology CDS 1220666 1221895 . + 0 ID=cds1079;Parent=gene1099;Dbxref=Genbank:WP_038400076.1;Name=WP_038400076.1;gbkey=CDS;product=integrase;protein_id=WP_038400076.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1222174 1222632 . + . ID=gene1100;Name=DJ40_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05525;old_locus_tag=DJ40_1114 NZ_CP008943.1 GeneMarkS+ CDS 1222174 1222632 . + 0 ID=cds1080;Parent=gene1100;Dbxref=Genbank:WP_038400077.1;Name=WP_038400077.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400077.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1222638 1223018 . + . ID=gene1101;Name=DJ40_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05530;old_locus_tag=DJ40_1115 NZ_CP008943.1 GeneMarkS+ CDS 1222638 1223018 . + 0 ID=cds1081;Parent=gene1101;Dbxref=Genbank:WP_038400079.1;Name=WP_038400079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400079.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1223031 1223405 . + . ID=gene1102;Name=DJ40_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05535;old_locus_tag=DJ40_1116 NZ_CP008943.1 Protein Homology CDS 1223031 1223405 . + 0 ID=cds1082;Parent=gene1102;Dbxref=Genbank:WP_038400080.1;Name=WP_038400080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400080.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1223410 1223775 . + . ID=gene1103;Name=DJ40_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05540;old_locus_tag=DJ40_1117 NZ_CP008943.1 Protein Homology CDS 1223410 1223775 . + 0 ID=cds1083;Parent=gene1103;Dbxref=Genbank:WP_038400082.1;Name=WP_038400082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400082.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1223919 1225235 . - . ID=gene1104;Name=DJ40_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05545;old_locus_tag=DJ40_1118 NZ_CP008943.1 Protein Homology CDS 1223919 1225235 . - 0 ID=cds1084;Parent=gene1104;Dbxref=Genbank:WP_038400084.1;Name=WP_038400084.1;gbkey=CDS;product=prepilin cleavage protein;protein_id=WP_038400084.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1225423 1225698 . - . ID=gene1105;Name=DJ40_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05550;old_locus_tag=DJ40_1119 NZ_CP008943.1 Protein Homology CDS 1225423 1225698 . - 0 ID=cds1085;Parent=gene1105;Dbxref=Genbank:WP_038400086.1;Name=WP_038400086.1;gbkey=CDS;product=conjugal transfer protein TraD;protein_id=WP_038400086.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1225701 1225952 . - . ID=gene1106;Name=DJ40_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05555;old_locus_tag=DJ40_1120 NZ_CP008943.1 Protein Homology CDS 1225701 1225952 . - 0 ID=cds1086;Parent=gene1106;Dbxref=Genbank:WP_038400087.1;Name=WP_038400087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400087.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1226156 1226725 . - . ID=gene1107;Name=DJ40_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05560;old_locus_tag=DJ40_1121 NZ_CP008943.1 Protein Homology CDS 1226156 1226725 . - 0 ID=cds1087;Parent=gene1107;Dbxref=Genbank:WP_038400089.1;Name=WP_038400089.1;gbkey=CDS;product=type IV pilin;protein_id=WP_038400089.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1227541 1228764 . + . ID=gene1108;Name=DJ40_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05565;old_locus_tag=DJ40_1122 NZ_CP008943.1 Protein Homology CDS 1227541 1228764 . + 0 ID=cds1088;Parent=gene1108;Dbxref=Genbank:WP_038400090.1;Name=WP_038400090.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400090.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1228767 1229249 . + . ID=gene1109;Name=DJ40_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05570;old_locus_tag=DJ40_1123 NZ_CP008943.1 Protein Homology CDS 1228767 1229249 . + 0 ID=cds1089;Parent=gene1109;Dbxref=Genbank:WP_038400091.1;Name=WP_038400091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400091.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1229251 1231260 . + . ID=gene1110;Name=DJ40_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05575;old_locus_tag=DJ40_1124 NZ_CP008943.1 Protein Homology CDS 1229251 1231260 . + 0 ID=cds1090;Parent=gene1110;Dbxref=Genbank:WP_038400092.1;Name=WP_038400092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1232059 1233456 . + . ID=gene1111;Name=DJ40_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05580;old_locus_tag=DJ40_1125 NZ_CP008943.1 Protein Homology CDS 1232059 1233456 . + 0 ID=cds1091;Parent=gene1111;Dbxref=Genbank:WP_038400093.1;Name=WP_038400093.1;gbkey=CDS;product=conjugal transfer protein;protein_id=WP_038400093.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1233676 1235793 . + . ID=gene1112;Name=DJ40_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05585;old_locus_tag=DJ40_1126 NZ_CP008943.1 Protein Homology CDS 1233676 1235793 . + 0 ID=cds1092;Parent=gene1112;Dbxref=Genbank:WP_038400094.1;Name=WP_038400094.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400094.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1235960 1237063 . + . ID=gene1113;Name=DJ40_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05590;old_locus_tag=DJ40_1127 NZ_CP008943.1 Protein Homology CDS 1235960 1237063 . + 0 ID=cds1093;Parent=gene1113;Dbxref=Genbank:WP_038400095.1;Name=WP_038400095.1;gbkey=CDS;product=reverse transcriptase;protein_id=WP_038400095.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1237436 1237990 . - . ID=gene1114;Name=DJ40_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05595;old_locus_tag=DJ40_1128 NZ_CP008943.1 Protein Homology CDS 1237436 1237990 . - 0 ID=cds1094;Parent=gene1114;Dbxref=Genbank:WP_038400096.1;Name=WP_038400096.1;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_038400096.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1238005 1238586 . - . ID=gene1115;Name=DJ40_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05600;old_locus_tag=DJ40_1129 NZ_CP008943.1 Protein Homology CDS 1238005 1238586 . - 0 ID=cds1095;Parent=gene1115;Dbxref=Genbank:WP_038400097.1;Name=WP_038400097.1;gbkey=CDS;product=tRNA_anti-like family protein;protein_id=WP_038400097.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1240044 1240550 . + . ID=gene1116;Name=DJ40_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05605;old_locus_tag=DJ40_1130 NZ_CP008943.1 Protein Homology CDS 1240044 1240550 . + 0 ID=cds1096;Parent=gene1116;Dbxref=Genbank:WP_049862775.1;Name=WP_049862775.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1240627 1240941 . - . ID=gene1117;Name=DJ40_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05610;old_locus_tag=DJ40_1131 NZ_CP008943.1 Protein Homology CDS 1240627 1240941 . - 0 ID=cds1097;Parent=gene1117;Dbxref=Genbank:WP_038400099.1;Name=WP_038400099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400099.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1241075 1241374 . - . ID=gene1118;Name=DJ40_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05615;old_locus_tag=DJ40_1132 NZ_CP008943.1 Protein Homology CDS 1241075 1241374 . - 0 ID=cds1098;Parent=gene1118;Dbxref=Genbank:WP_038400101.1;Name=WP_038400101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400101.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1241463 1241666 . - . ID=gene1119;Name=DJ40_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05620;old_locus_tag=DJ40_1133 NZ_CP008943.1 Protein Homology CDS 1241463 1241666 . - 0 ID=cds1099;Parent=gene1119;Dbxref=Genbank:WP_005172867.1;Name=WP_005172867.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_005172867.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1242381 1242890 . + . ID=gene1120;Name=DJ40_RS05625;end_range=1242890,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS05625;old_locus_tag=DJ40_1135;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 1242381 1242890 . + 0 ID=cds1100;Parent=gene1120;end_range=1242890,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1242960 1243223 . + . ID=gene1121;Name=DJ40_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05630;old_locus_tag=DJ40_1136 NZ_CP008943.1 Protein Homology CDS 1242960 1243223 . + 0 ID=cds1101;Parent=gene1121;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1243306 1243491 . + . ID=gene1122;Name=DJ40_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05635 NZ_CP008943.1 Protein Homology CDS 1243306 1243491 . + 0 ID=cds1102;Parent=gene1122;Dbxref=Genbank:WP_002215393.1;Name=WP_002215393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215393.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1243654 1243905 . - . ID=gene1123;Name=DJ40_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05640;old_locus_tag=DJ40_1137 NZ_CP008943.1 Protein Homology CDS 1243654 1243905 . - 0 ID=cds1103;Parent=gene1123;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1244616 1245383 . + . ID=gene1124;Name=DJ40_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05645;old_locus_tag=DJ40_1138 NZ_CP008943.1 Protein Homology CDS 1244616 1245383 . + 0 ID=cds1104;Parent=gene1124;Dbxref=Genbank:WP_012304383.1;Name=WP_012304383.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_012304383.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1245535 1245660 . - . ID=gene1125;Name=DJ40_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05650 NZ_CP008943.1 Protein Homology CDS 1245535 1245660 . - 0 ID=cds1105;Parent=gene1125;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1245715 1246002 . + . ID=gene1126;Name=DJ40_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05655;old_locus_tag=DJ40_1140 NZ_CP008943.1 Protein Homology CDS 1245715 1246002 . + 0 ID=cds1106;Parent=gene1126;Dbxref=Genbank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1246419 1246946 . + . ID=gene1127;Name=DJ40_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05660;old_locus_tag=DJ40_1141 NZ_CP008943.1 Protein Homology CDS 1246419 1246946 . + 0 ID=cds1107;Parent=gene1127;Dbxref=Genbank:WP_002215386.1;Name=WP_002215386.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002215386.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1247313 1247759 . + . ID=gene1128;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=DJ40_RS05665;old_locus_tag=DJ40_1142 NZ_CP008943.1 Protein Homology CDS 1247313 1247759 . + 0 ID=cds1108;Parent=gene1128;Dbxref=Genbank:WP_011191941.1;Name=WP_011191941.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=WP_011191941.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1248200 1250875 . - . ID=gene1129;Name=DJ40_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05670;old_locus_tag=DJ40_1143 NZ_CP008943.1 Protein Homology CDS 1248200 1250875 . - 0 ID=cds1109;Parent=gene1129;Dbxref=Genbank:WP_032466169.1;Name=WP_032466169.1;gbkey=CDS;product=beta-N-acetylhexosaminidase;protein_id=WP_032466169.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1251203 1252624 . - . ID=gene1130;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=DJ40_RS05675;old_locus_tag=DJ40_1144 NZ_CP008943.1 Protein Homology CDS 1251203 1252624 . - 0 ID=cds1110;Parent=gene1130;Dbxref=Genbank:WP_032466170.1;Name=WP_032466170.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=chitoporin;protein_id=WP_032466170.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1253330 1254997 . - . ID=gene1131;Name=DJ40_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05680;old_locus_tag=DJ40_1145 NZ_CP008943.1 Protein Homology CDS 1253330 1254997 . - 0 ID=cds1111;Parent=gene1131;Dbxref=Genbank:WP_002210354.1;Name=WP_002210354.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1255091 1255809 . + . ID=id63;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1255201 1255659 . - . ID=gene1132;Name=DJ40_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05685;old_locus_tag=DJ40_1146 NZ_CP008943.1 Protein Homology CDS 1255201 1255659 . - 0 ID=cds1112;Parent=gene1132;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1255924 1257957 . - . ID=gene1133;Name=DJ40_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05690;old_locus_tag=DJ40_1147 NZ_CP008943.1 Protein Homology CDS 1255924 1257957 . - 0 ID=cds1113;Parent=gene1133;Dbxref=Genbank:WP_012105501.1;Name=WP_012105501.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetylglucosamine transporter subunit IIABC;protein_id=WP_012105501.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1258356 1259156 . + . ID=gene1134;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=DJ40_RS05695;old_locus_tag=DJ40_1148 NZ_CP008943.1 Protein Homology CDS 1258356 1259156 . + 0 ID=cds1114;Parent=gene1134;Dbxref=Genbank:WP_038400103.1;Name=WP_038400103.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_038400103.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1259176 1260321 . + . ID=gene1135;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=DJ40_RS05700;old_locus_tag=DJ40_1149 NZ_CP008943.1 Protein Homology CDS 1259176 1260321 . + 0 ID=cds1115;Parent=gene1135;Dbxref=Genbank:WP_038400105.1;Name=WP_038400105.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_038400105.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1260338 1261564 . + . ID=gene1136;Name=DJ40_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05705;old_locus_tag=DJ40_1150 NZ_CP008943.1 Protein Homology CDS 1260338 1261564 . + 0 ID=cds1116;Parent=gene1136;Dbxref=Genbank:WP_002224863.1;Name=WP_002224863.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002224863.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1261641 1262393 . + . ID=gene1137;Name=DJ40_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05710;old_locus_tag=DJ40_1151 NZ_CP008943.1 Protein Homology CDS 1261641 1262393 . + 0 ID=cds1117;Parent=gene1137;Dbxref=Genbank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_002210349.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1262748 1264412 . + . ID=gene1138;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=DJ40_RS05715;old_locus_tag=DJ40_1152 NZ_CP008943.1 Protein Homology CDS 1262748 1264412 . + 0 ID=cds1118;Parent=gene1138;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1264461 1264598 . - . ID=gene1139;Name=DJ40_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05720 NZ_CP008943.1 Protein Homology CDS 1264461 1264598 . - 0 ID=cds1119;Parent=gene1139;Dbxref=Genbank:WP_002222587.1;Name=WP_002222587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222587.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1264870 1264946 . + . ID=gene1140;Name=DJ40_RS05725;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05725;old_locus_tag=DJ40_1153 NZ_CP008943.1 tRNAscan-SE tRNA 1264870 1264946 . + . ID=rna16;Parent=gene1140;anticodon=(pos:1264904..1264906);gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 tRNAscan-SE exon 1264870 1264946 . + . ID=id64;Parent=rna16;anticodon=(pos:1264904..1264906);gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 RefSeq gene 1264954 1265038 . + . ID=gene1141;Name=DJ40_RS05730;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05730;old_locus_tag=DJ40_1154 NZ_CP008943.1 tRNAscan-SE tRNA 1264954 1265038 . + . ID=rna17;Parent=gene1141;anticodon=(pos:1264988..1264990);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 1264954 1265038 . + . ID=id65;Parent=rna17;anticodon=(pos:1264988..1264990);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 1265068 1265142 . + . ID=gene1142;Name=DJ40_RS05735;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05735;old_locus_tag=DJ40_1155 NZ_CP008943.1 tRNAscan-SE tRNA 1265068 1265142 . + . ID=rna18;Parent=gene1142;anticodon=(pos:1265100..1265102);gbkey=tRNA;product=tRNA-Gln NZ_CP008943.1 tRNAscan-SE exon 1265068 1265142 . + . ID=id66;Parent=rna18;anticodon=(pos:1265100..1265102);gbkey=tRNA;product=tRNA-Gln NZ_CP008943.1 RefSeq gene 1265226 1265300 . + . ID=gene1143;Name=DJ40_RS05740;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05740;old_locus_tag=DJ40_1156 NZ_CP008943.1 tRNAscan-SE tRNA 1265226 1265300 . + . ID=rna19;Parent=gene1143;anticodon=(pos:1265258..1265260);gbkey=tRNA;product=tRNA-Gln NZ_CP008943.1 tRNAscan-SE exon 1265226 1265300 . + . ID=id67;Parent=rna19;anticodon=(pos:1265258..1265260);gbkey=tRNA;product=tRNA-Gln NZ_CP008943.1 RefSeq gene 1265333 1265409 . + . ID=gene1144;Name=DJ40_RS05745;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05745;old_locus_tag=DJ40_1157 NZ_CP008943.1 tRNAscan-SE tRNA 1265333 1265409 . + . ID=rna20;Parent=gene1144;anticodon=(pos:1265367..1265369);gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 tRNAscan-SE exon 1265333 1265409 . + . ID=id68;Parent=rna20;anticodon=(pos:1265367..1265369);gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 RefSeq gene 1265415 1265489 . + . ID=gene1145;Name=DJ40_RS05750;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS05750;old_locus_tag=DJ40_1158 NZ_CP008943.1 tRNAscan-SE tRNA 1265415 1265489 . + . ID=rna21;Parent=gene1145;anticodon=(pos:1265447..1265449);gbkey=tRNA;product=tRNA-Gln NZ_CP008943.1 tRNAscan-SE exon 1265415 1265489 . + . ID=id69;Parent=rna21;anticodon=(pos:1265447..1265449);gbkey=tRNA;product=tRNA-Gln NZ_CP008943.1 RefSeq gene 1265902 1267083 . - . ID=gene1146;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=DJ40_RS05755;old_locus_tag=DJ40_1159 NZ_CP008943.1 Protein Homology CDS 1265902 1267083 . - 0 ID=cds1120;Parent=gene1146;Dbxref=Genbank:WP_038400106.1;Name=WP_038400106.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_038400106.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1267325 1268749 . + . ID=gene1147;Name=DJ40_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05760;old_locus_tag=DJ40_1160 NZ_CP008943.1 Protein Homology CDS 1267325 1268749 . + 0 ID=cds1121;Parent=gene1147;Dbxref=Genbank:WP_011191936.1;Name=WP_011191936.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_011191936.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1269094 1270149 . + . ID=gene1148;Name=DJ40_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05765;old_locus_tag=DJ40_1161 NZ_CP008943.1 Protein Homology CDS 1269094 1270149 . + 0 ID=cds1122;Parent=gene1148;Dbxref=Genbank:WP_002354474.1;Name=WP_002354474.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_002354474.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1270146 1270619 . + . ID=gene1149;Name=DJ40_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05770;old_locus_tag=DJ40_1162 NZ_CP008943.1 Protein Homology CDS 1270146 1270619 . + 0 ID=cds1123;Parent=gene1149;Dbxref=Genbank:WP_011191934.1;Name=WP_011191934.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_011191934.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1270737 1271615 . + . ID=gene1150;Name=DJ40_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05775;old_locus_tag=DJ40_1163 NZ_CP008943.1 Protein Homology CDS 1270737 1271615 . + 0 ID=cds1124;Parent=gene1150;Dbxref=Genbank:WP_002210342.1;Name=WP_002210342.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_002210342.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1271623 1273170 . + . ID=gene1151;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=DJ40_RS05780;old_locus_tag=DJ40_1164 NZ_CP008943.1 Protein Homology CDS 1271623 1273170 . + 0 ID=cds1125;Parent=gene1151;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1273880 1274797 . + . ID=gene1152;Name=DJ40_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05785;old_locus_tag=DJ40_1165 NZ_CP008943.1 Protein Homology CDS 1273880 1274797 . + 0 ID=cds1126;Parent=gene1152;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1274971 1275711 . + . ID=gene1153;Name=DJ40_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05790;old_locus_tag=DJ40_1166 NZ_CP008943.1 Protein Homology CDS 1274971 1275711 . + 0 ID=cds1127;Parent=gene1153;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1275711 1276385 . + . ID=gene1154;Name=DJ40_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05795;old_locus_tag=DJ40_1167 NZ_CP008943.1 Protein Homology CDS 1275711 1276385 . + 0 ID=cds1128;Parent=gene1154;Dbxref=Genbank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;product=glutamate/aspartate transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1276385 1277110 . + . ID=gene1155;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=DJ40_RS05800;old_locus_tag=DJ40_1168 NZ_CP008943.1 Protein Homology CDS 1276385 1277110 . + 0 ID=cds1129;Parent=gene1155;Dbxref=Genbank:WP_002210336.1;Name=WP_002210336.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1277245 1277727 . - . ID=gene1156;Name=DJ40_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05805;old_locus_tag=DJ40_1169 NZ_CP008943.1 Protein Homology CDS 1277245 1277727 . - 0 ID=cds1130;Parent=gene1156;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1277989 1280571 . + . ID=gene1157;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=DJ40_RS05810;old_locus_tag=DJ40_1170 NZ_CP008943.1 Protein Homology CDS 1277989 1280571 . + 0 ID=cds1131;Parent=gene1157;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1280586 1281209 . + . ID=gene1158;Name=DJ40_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05815;old_locus_tag=DJ40_1171 NZ_CP008943.1 Protein Homology CDS 1280586 1281209 . + 0 ID=cds1132;Parent=gene1158;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1281206 1282240 . + . ID=gene1159;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=DJ40_RS05820;old_locus_tag=DJ40_1172 NZ_CP008943.1 Protein Homology CDS 1281206 1282240 . + 0 ID=cds1133;Parent=gene1159;Dbxref=Genbank:WP_011191933.1;Name=WP_011191933.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_011191933.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1282230 1282892 . + . ID=gene1160;Name=DJ40_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05825;old_locus_tag=DJ40_1173 NZ_CP008943.1 Protein Homology CDS 1282230 1282892 . + 0 ID=cds1134;Parent=gene1160;Dbxref=Genbank:WP_038400108.1;Name=WP_038400108.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_038400108.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1283115 1283432 . + . ID=gene1161;Name=DJ40_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05830;old_locus_tag=DJ40_1174 NZ_CP008943.1 Protein Homology CDS 1283115 1283432 . + 0 ID=cds1135;Parent=gene1161;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1283436 1283906 . + . ID=gene1162;Name=DJ40_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05835;old_locus_tag=DJ40_1175 NZ_CP008943.1 Protein Homology CDS 1283436 1283906 . + 0 ID=cds1136;Parent=gene1162;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1283988 1285883 . + . ID=gene1163;Name=DJ40_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05840;old_locus_tag=DJ40_1176 NZ_CP008943.1 Protein Homology CDS 1283988 1285883 . + 0 ID=cds1137;Parent=gene1163;Dbxref=Genbank:WP_012304391.1;Name=WP_012304391.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_012304391.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1286069 1287181 . + . ID=gene1164;Name=DJ40_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05845;old_locus_tag=DJ40_1177 NZ_CP008943.1 Protein Homology CDS 1286069 1287181 . + 0 ID=cds1138;Parent=gene1164;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1287191 1288273 . + . ID=gene1165;Name=DJ40_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05850;old_locus_tag=DJ40_1178 NZ_CP008943.1 Protein Homology CDS 1287191 1288273 . + 0 ID=cds1139;Parent=gene1165;Dbxref=Genbank:WP_002210324.1;Name=WP_002210324.1;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210324.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1288676 1289878 . + . ID=gene1166;Name=DJ40_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05855;old_locus_tag=DJ40_1179 NZ_CP008943.1 Protein Homology CDS 1288676 1289878 . + 0 ID=cds1140;Parent=gene1166;Dbxref=Genbank:WP_011191931.1;Name=WP_011191931.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_011191931.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1290076 1290339 . + . ID=gene1167;Name=DJ40_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05860;old_locus_tag=DJ40_1180 NZ_CP008943.1 Protein Homology CDS 1290076 1290339 . + 0 ID=cds1141;Parent=gene1167;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1290551 1291252 . + . ID=gene1168;Name=DJ40_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05865;old_locus_tag=DJ40_1181 NZ_CP008943.1 Protein Homology CDS 1290551 1291252 . + 0 ID=cds1142;Parent=gene1168;Dbxref=Genbank:WP_038400111.1;Name=WP_038400111.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_038400111.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1291445 1292410 . + . ID=gene1169;Name=DJ40_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05870;old_locus_tag=DJ40_1182 NZ_CP008943.1 Protein Homology CDS 1291445 1292410 . + 0 ID=cds1143;Parent=gene1169;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1292591 1292848 . - . ID=gene1170;Name=DJ40_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05875;old_locus_tag=DJ40_1183 NZ_CP008943.1 Protein Homology CDS 1292591 1292848 . - 0 ID=cds1144;Parent=gene1170;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1292920 1293072 . - . ID=gene1171;Name=DJ40_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05880 NZ_CP008943.1 Protein Homology CDS 1292920 1293072 . - 0 ID=cds1145;Parent=gene1171;Dbxref=Genbank:WP_038400112.1;Name=WP_038400112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400112.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1293432 1293815 . + . ID=gene1172;Name=DJ40_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05885;old_locus_tag=DJ40_1184 NZ_CP008943.1 Protein Homology CDS 1293432 1293815 . + 0 ID=cds1146;Parent=gene1172;Dbxref=Genbank:WP_012105525.1;Name=WP_012105525.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_012105525.1;transl_table=11 NZ_CP008943.1 cmsearch region 1294192 1294620 . - . ID=id70;Note=cspA;gbkey=misc_feature NZ_CP008943.1 RefSeq gene 1294238 1294447 . - . ID=gene1173;Name=DJ40_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05890;old_locus_tag=DJ40_1185 NZ_CP008943.1 Protein Homology CDS 1294238 1294447 . - 0 ID=cds1147;Parent=gene1173;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1294726 1295205 . + . ID=gene1174;Name=DJ40_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05895;old_locus_tag=DJ40_1186 NZ_CP008943.1 Protein Homology CDS 1294726 1295205 . + 0 ID=cds1148;Parent=gene1174;Dbxref=Genbank:WP_012304395.1;Name=WP_012304395.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012304395.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1295468 1296058 . - . ID=gene1175;Name=DJ40_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05900;old_locus_tag=DJ40_1187 NZ_CP008943.1 Protein Homology CDS 1295468 1296058 . - 0 ID=cds1149;Parent=gene1175;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1296508 1297473 . + . ID=gene1176;Name=DJ40_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05905;old_locus_tag=DJ40_1188 NZ_CP008943.1 Protein Homology CDS 1296508 1297473 . + 0 ID=cds1150;Parent=gene1176;Dbxref=Genbank:WP_011191928.1;Name=WP_011191928.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191928.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1297655 1297835 . + . ID=gene1177;Name=DJ40_RS05910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS05910;pseudo=true NZ_CP008943.1 Protein Homology CDS 1297655 1297835 . + 0 ID=cds1151;Parent=gene1177;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1297853 1298047 . - . ID=gene1178;Name=DJ40_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05915;old_locus_tag=DJ40_1189 NZ_CP008943.1 Protein Homology CDS 1297853 1298047 . - 0 ID=cds1152;Parent=gene1178;Dbxref=Genbank:WP_012105528.1;Name=WP_012105528.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_012105528.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1298490 1298777 . + . ID=gene1179;Name=DJ40_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05920;old_locus_tag=DJ40_1190 NZ_CP008943.1 Protein Homology CDS 1298490 1298777 . + 0 ID=cds1153;Parent=gene1179;Dbxref=Genbank:WP_038400114.1;Name=WP_038400114.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_038400114.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1298793 1300583 . - . ID=gene1180;Name=DJ40_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05925;old_locus_tag=DJ40_1191 NZ_CP008943.1 Protein Homology CDS 1298793 1300583 . - 0 ID=cds1154;Parent=gene1180;Dbxref=Genbank:WP_002214723.1;Name=WP_002214723.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002214723.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1300791 1300994 . - . ID=gene1181;Name=DJ40_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05930;old_locus_tag=DJ40_1192 NZ_CP008943.1 Protein Homology CDS 1300791 1300994 . - 0 ID=cds1155;Parent=gene1181;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1301153 1301968 . - . ID=gene1182;Name=DJ40_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05935;old_locus_tag=DJ40_1193 NZ_CP008943.1 Protein Homology CDS 1301153 1301968 . - 0 ID=cds1156;Parent=gene1182;Dbxref=Genbank:WP_011191925.1;Name=WP_011191925.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_011191925.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1301978 1302898 . - . ID=gene1183;Name=DJ40_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05940;old_locus_tag=DJ40_1194 NZ_CP008943.1 Protein Homology CDS 1301978 1302898 . - 0 ID=cds1157;Parent=gene1183;Dbxref=Genbank:WP_002227877.1;Name=WP_002227877.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_002227877.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1303069 1304946 . - . ID=gene1184;Name=DJ40_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05945;old_locus_tag=DJ40_1195 NZ_CP008943.1 Protein Homology CDS 1303069 1304946 . - 0 ID=cds1158;Parent=gene1184;Dbxref=Genbank:WP_038401589.1;Name=WP_038401589.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_038401589.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1305088 1306221 . - . ID=gene1185;Name=DJ40_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05950;old_locus_tag=DJ40_1196 NZ_CP008943.1 Protein Homology CDS 1305088 1306221 . - 0 ID=cds1159;Parent=gene1185;Dbxref=Genbank:WP_038400115.1;Name=WP_038400115.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_038400115.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1306245 1307273 . - . ID=gene1186;Name=DJ40_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05955;old_locus_tag=DJ40_1197 NZ_CP008943.1 Protein Homology CDS 1306245 1307273 . - 0 ID=cds1160;Parent=gene1186;Dbxref=Genbank:WP_038400117.1;Name=WP_038400117.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038400117.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1307285 1308832 . - . ID=gene1187;Name=DJ40_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05960;old_locus_tag=DJ40_1198 NZ_CP008943.1 Protein Homology CDS 1307285 1308832 . - 0 ID=cds1161;Parent=gene1187;Dbxref=Genbank:WP_012105532.1;Name=WP_012105532.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_012105532.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1308881 1309810 . - . ID=gene1188;Name=DJ40_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05965;old_locus_tag=DJ40_1199 NZ_CP008943.1 Protein Homology CDS 1308881 1309810 . - 0 ID=cds1162;Parent=gene1188;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1309954 1310940 . - . ID=gene1189;Name=DJ40_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05970;old_locus_tag=DJ40_1200 NZ_CP008943.1 Protein Homology CDS 1309954 1310940 . - 0 ID=cds1163;Parent=gene1189;Dbxref=Genbank:WP_038400119.1;Name=WP_038400119.1;gbkey=CDS;product=inositol 2-dehydrogenase;protein_id=WP_038400119.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1311252 1313177 . - . ID=gene1190;Name=DJ40_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05975;old_locus_tag=DJ40_1201 NZ_CP008943.1 Protein Homology CDS 1311252 1313177 . - 0 ID=cds1164;Parent=gene1190;Dbxref=Genbank:WP_002359655.1;Name=WP_002359655.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_002359655.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1313212 1314738 . - . ID=gene1191;Name=DJ40_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05980;old_locus_tag=DJ40_1202 NZ_CP008943.1 Protein Homology CDS 1313212 1314738 . - 0 ID=cds1165;Parent=gene1191;Dbxref=Genbank:WP_032466174.1;Name=WP_032466174.1;gbkey=CDS;product=methylmalonate-semialdehyde dehydrogenase;protein_id=WP_032466174.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1315085 1315939 . + . ID=gene1192;Name=DJ40_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05985;old_locus_tag=DJ40_1203 NZ_CP008943.1 Protein Homology CDS 1315085 1315939 . + 0 ID=cds1166;Parent=gene1192;Dbxref=Genbank:WP_012304405.1;Name=WP_012304405.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_012304405.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1316539 1322526 . + . ID=gene1193;Name=DJ40_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05990;old_locus_tag=DJ40_1205 NZ_CP008943.1 Protein Homology CDS 1316539 1322526 . + 0 ID=cds1167;Parent=gene1193;Dbxref=Genbank:WP_032466175.1;Name=WP_032466175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466175.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1322583 1324946 . + . ID=gene1194;Name=DJ40_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS05995;old_locus_tag=DJ40_1206 NZ_CP008943.1 Protein Homology CDS 1322583 1324946 . + 0 ID=cds1168;Parent=gene1194;Dbxref=Genbank:WP_032466176.1;Name=WP_032466176.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_032466176.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1325159 1325404 . - . ID=gene1195;Name=DJ40_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06000;old_locus_tag=DJ40_1207 NZ_CP008943.1 Protein Homology CDS 1325159 1325404 . - 0 ID=cds1169;Parent=gene1195;Dbxref=Genbank:WP_038400122.1;Name=WP_038400122.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_038400122.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1326077 1326651 . + . ID=gene1196;Name=DJ40_RS06005;end_range=1326651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS06005;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 1326077 1326651 . + 0 ID=cds1170;Parent=gene1196;end_range=1326651,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1326926 1327327 . + . ID=gene1197;Name=DJ40_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06010 NZ_CP008943.1 Protein Homology CDS 1326926 1327327 . + 0 ID=cds1171;Parent=gene1197;Dbxref=Genbank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209748.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1327432 1327911 . - . ID=gene1198;Name=DJ40_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06015;old_locus_tag=DJ40_1211 NZ_CP008943.1 Protein Homology CDS 1327432 1327911 . - 0 ID=cds1172;Parent=gene1198;Dbxref=Genbank:WP_011191915.1;Name=WP_011191915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191915.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1327935 1328186 . - . ID=gene1199;Name=DJ40_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06020;old_locus_tag=DJ40_1212 NZ_CP008943.1 Protein Homology CDS 1327935 1328186 . - 0 ID=cds1173;Parent=gene1199;Dbxref=Genbank:WP_012105539.1;Name=WP_012105539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105539.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1328225 1328464 . - . ID=gene1200;Name=DJ40_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06025;old_locus_tag=DJ40_1213 NZ_CP008943.1 Protein Homology CDS 1328225 1328464 . - 0 ID=cds1174;Parent=gene1200;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1329273 1331189 . + . ID=gene1201;Name=DJ40_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06030;old_locus_tag=DJ40_1214 NZ_CP008943.1 Protein Homology CDS 1329273 1331189 . + 0 ID=cds1175;Parent=gene1201;Dbxref=Genbank:WP_032466177.1;Name=WP_032466177.1;gbkey=CDS;product=autotransporter;protein_id=WP_032466177.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1331213 1331386 . + . ID=id71;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1331724 1332289 . + . ID=gene1202;Name=DJ40_RS06035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS06035;pseudo=true NZ_CP008943.1 Protein Homology CDS 1331724 1332289 . + 0 ID=cds1176;Parent=gene1202;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1332304 1333425 . - . ID=gene1203;Name=DJ40_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06040;old_locus_tag=DJ40_1216 NZ_CP008943.1 Protein Homology CDS 1332304 1333425 . - 0 ID=cds1177;Parent=gene1203;Dbxref=Genbank:WP_012304415.1;Name=WP_012304415.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304415.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1333720 1334592 . - . ID=gene1204;Name=DJ40_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06045;old_locus_tag=DJ40_1217 NZ_CP008943.1 Protein Homology CDS 1333720 1334592 . - 0 ID=cds1178;Parent=gene1204;Dbxref=Genbank:WP_011191911.1;Name=WP_011191911.1;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA;gbkey=CDS;product=23S rRNA pseudouridine synthase F;protein_id=WP_011191911.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1334953 1337160 . + . ID=gene1205;Name=DJ40_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06050;old_locus_tag=DJ40_1218 NZ_CP008943.1 Protein Homology CDS 1334953 1337160 . + 0 ID=cds1179;Parent=gene1205;Dbxref=Genbank:WP_032466178.1;Name=WP_032466178.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466178.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1337153 1337683 . + . ID=gene1206;Name=DJ40_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06055;old_locus_tag=DJ40_1219 NZ_CP008943.1 Protein Homology CDS 1337153 1337683 . + 0 ID=cds1180;Parent=gene1206;Dbxref=Genbank:WP_011191909.1;Name=WP_011191909.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191909.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1337839 1340220 . + . ID=gene1207;Name=DJ40_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06060;old_locus_tag=DJ40_1220 NZ_CP008943.1 Protein Homology CDS 1337839 1340220 . + 0 ID=cds1181;Parent=gene1207;Dbxref=Genbank:WP_012304417.1;Name=WP_012304417.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_012304417.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1340299 1341927 . - . ID=gene1208;Name=DJ40_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06065;old_locus_tag=DJ40_1221 NZ_CP008943.1 Protein Homology CDS 1340299 1341927 . - 0 ID=cds1182;Parent=gene1208;Dbxref=Genbank:WP_032466179.1;Name=WP_032466179.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466179.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1341944 1342087 . - . ID=gene1209;Name=DJ40_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06070 NZ_CP008943.1 Protein Homology CDS 1341944 1342087 . - 0 ID=cds1183;Parent=gene1209;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1342084 1342209 . - . ID=gene1210;Name=DJ40_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06075 NZ_CP008943.1 Protein Homology CDS 1342084 1342209 . - 0 ID=cds1184;Parent=gene1210;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1342400 1343251 . + . ID=gene1211;Name=DJ40_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06080;old_locus_tag=DJ40_1222 NZ_CP008943.1 Protein Homology CDS 1342400 1343251 . + 0 ID=cds1185;Parent=gene1211;Dbxref=Genbank:WP_002209762.1;Name=WP_002209762.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_002209762.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1343277 1344266 . + . ID=gene1212;Name=DJ40_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06085;old_locus_tag=DJ40_1223 NZ_CP008943.1 Protein Homology CDS 1343277 1344266 . + 0 ID=cds1186;Parent=gene1212;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1344321 1345214 . - . ID=gene1213;Name=DJ40_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06090;old_locus_tag=DJ40_1224 NZ_CP008943.1 Protein Homology CDS 1344321 1345214 . - 0 ID=cds1187;Parent=gene1213;Dbxref=Genbank:WP_002209764.1;Name=WP_002209764.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1345517 1345822 . - . ID=gene1214;Name=DJ40_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06095;old_locus_tag=DJ40_1225 NZ_CP008943.1 Protein Homology CDS 1345517 1345822 . - 0 ID=cds1188;Parent=gene1214;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1345919 1346320 . - . ID=gene1215;Name=DJ40_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06100;old_locus_tag=DJ40_1226 NZ_CP008943.1 Protein Homology CDS 1345919 1346320 . - 0 ID=cds1189;Parent=gene1215;Dbxref=Genbank:WP_002209765.1;Name=WP_002209765.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209765.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1346302 1347621 . - . ID=gene1216;Name=DJ40_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06105;old_locus_tag=DJ40_1227 NZ_CP008943.1 Protein Homology CDS 1346302 1347621 . - 0 ID=cds1190;Parent=gene1216;Dbxref=Genbank:WP_012105549.1;Name=WP_012105549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105549.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1347614 1349377 . - . ID=gene1217;Name=DJ40_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06110;old_locus_tag=DJ40_1228 NZ_CP008943.1 Protein Homology CDS 1347614 1349377 . - 0 ID=cds1191;Parent=gene1217;Dbxref=Genbank:WP_038400127.1;Name=WP_038400127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400127.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1349374 1350006 . - . ID=gene1218;Name=DJ40_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06115;old_locus_tag=DJ40_1229 NZ_CP008943.1 Protein Homology CDS 1349374 1350006 . - 0 ID=cds1192;Parent=gene1218;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1350016 1350945 . - . ID=gene1219;Name=DJ40_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06120;old_locus_tag=DJ40_1230 NZ_CP008943.1 Protein Homology CDS 1350016 1350945 . - 0 ID=cds1193;Parent=gene1219;Dbxref=Genbank:WP_002209769.1;Name=WP_002209769.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_002209769.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1350938 1351540 . - . ID=gene1220;Name=DJ40_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06125;old_locus_tag=DJ40_1231 NZ_CP008943.1 Protein Homology CDS 1350938 1351540 . - 0 ID=cds1194;Parent=gene1220;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1351767 1351943 . - . ID=gene1221;Name=DJ40_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06130;old_locus_tag=DJ40_1232 NZ_CP008943.1 Protein Homology CDS 1351767 1351943 . - 0 ID=cds1195;Parent=gene1221;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1351940 1352146 . - . ID=gene1222;Name=DJ40_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06135;old_locus_tag=DJ40_1233 NZ_CP008943.1 Protein Homology CDS 1351940 1352146 . - 0 ID=cds1196;Parent=gene1222;Dbxref=Genbank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1352719 1353057 . + . ID=gene1223;Name=DJ40_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06140;old_locus_tag=DJ40_1234 NZ_CP008943.1 Protein Homology CDS 1352719 1353057 . + 0 ID=cds1197;Parent=gene1223;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1353042 1353689 . + . ID=gene1224;Name=DJ40_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06145;old_locus_tag=DJ40_1235 NZ_CP008943.1 Protein Homology CDS 1353042 1353689 . + 0 ID=cds1198;Parent=gene1224;Dbxref=Genbank:WP_012105552.1;Name=WP_012105552.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105552.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1353803 1354003 . + . ID=gene1225;Name=DJ40_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06150 NZ_CP008943.1 Protein Homology CDS 1353803 1354003 . + 0 ID=cds1199;Parent=gene1225;Dbxref=Genbank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1354262 1354444 . + . ID=gene1226;Name=DJ40_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06155 NZ_CP008943.1 Protein Homology CDS 1354262 1354444 . + 0 ID=cds1200;Parent=gene1226;Dbxref=Genbank:WP_038400129.1;Name=WP_038400129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400129.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1354658 1355491 . - . ID=gene1227;Name=DJ40_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06160;old_locus_tag=DJ40_1236 NZ_CP008943.1 Protein Homology CDS 1354658 1355491 . - 0 ID=cds1201;Parent=gene1227;Dbxref=Genbank:WP_038400131.1;Name=WP_038400131.1;gbkey=CDS;product=restriction methylase;protein_id=WP_038400131.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1355624 1355992 . - . ID=gene1228;Name=DJ40_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06165;old_locus_tag=DJ40_1237 NZ_CP008943.1 Protein Homology CDS 1355624 1355992 . - 0 ID=cds1202;Parent=gene1228;Dbxref=Genbank:WP_038400133.1;Name=WP_038400133.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400133.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1356018 1356392 . - . ID=gene1229;Name=DJ40_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06170;old_locus_tag=DJ40_1238 NZ_CP008943.1 Protein Homology CDS 1356018 1356392 . - 0 ID=cds1203;Parent=gene1229;Dbxref=Genbank:WP_038400135.1;Name=WP_038400135.1;gbkey=CDS;product=Mu phage lytic protein YfjZ;protein_id=WP_038400135.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1356413 1356634 . - . ID=gene1230;Name=DJ40_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06175;old_locus_tag=DJ40_1239 NZ_CP008943.1 Protein Homology CDS 1356413 1356634 . - 0 ID=cds1204;Parent=gene1230;Dbxref=Genbank:WP_038400137.1;Name=WP_038400137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400137.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1356645 1357130 . - . ID=gene1231;Name=DJ40_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06180;old_locus_tag=DJ40_1240 NZ_CP008943.1 Protein Homology CDS 1356645 1357130 . - 0 ID=cds1205;Parent=gene1231;Dbxref=Genbank:WP_049862807.1;Name=WP_049862807.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862807.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1357185 1357634 . - . ID=gene1232;Name=DJ40_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06185;old_locus_tag=DJ40_1241 NZ_CP008943.1 Protein Homology CDS 1357185 1357634 . - 0 ID=cds1206;Parent=gene1232;Dbxref=Genbank:WP_049862808.1;Name=WP_049862808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862808.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1357980 1358813 . - . ID=gene1233;Name=DJ40_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06195;old_locus_tag=DJ40_1243 NZ_CP008943.1 Protein Homology CDS 1357980 1358813 . - 0 ID=cds1207;Parent=gene1233;Dbxref=Genbank:WP_038400142.1;Name=WP_038400142.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400142.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1358957 1359313 . - . ID=gene1234;Name=DJ40_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06200;old_locus_tag=DJ40_1244 NZ_CP008943.1 Protein Homology CDS 1358957 1359313 . - 0 ID=cds1208;Parent=gene1234;Dbxref=Genbank:WP_038400144.1;Name=WP_038400144.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1359368 1359805 . - . ID=gene1235;Name=DJ40_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06205;old_locus_tag=DJ40_1245 NZ_CP008943.1 Protein Homology CDS 1359368 1359805 . - 0 ID=cds1209;Parent=gene1235;Dbxref=Genbank:WP_038401596.1;Name=WP_038401596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401596.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1359862 1360416 . - . ID=gene1236;Name=DJ40_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06210;old_locus_tag=DJ40_1246 NZ_CP008943.1 Protein Homology CDS 1359862 1360416 . - 0 ID=cds1210;Parent=gene1236;Dbxref=Genbank:WP_038400146.1;Name=WP_038400146.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400146.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1360664 1361419 . - . ID=gene1237;Name=DJ40_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06215;old_locus_tag=DJ40_1247 NZ_CP008943.1 Protein Homology CDS 1360664 1361419 . - 0 ID=cds1211;Parent=gene1237;Dbxref=Genbank:WP_038401598.1;Name=WP_038401598.1;gbkey=CDS;product=ATP/GTP-binding protein;protein_id=WP_038401598.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1361651 1362508 . - . ID=gene1238;Name=DJ40_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06220;old_locus_tag=DJ40_1248 NZ_CP008943.1 GeneMarkS+ CDS 1361651 1362508 . - 0 ID=cds1212;Parent=gene1238;Dbxref=Genbank:WP_038400148.1;Name=WP_038400148.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400148.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1362659 1362865 . - . ID=gene1239;Name=DJ40_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06225 NZ_CP008943.1 GeneMarkS+ CDS 1362659 1362865 . - 0 ID=cds1213;Parent=gene1239;Dbxref=Genbank:WP_038400150.1;Name=WP_038400150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400150.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1362921 1363130 . + . ID=gene1240;Name=DJ40_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06230;old_locus_tag=DJ40_1249 NZ_CP008943.1 Protein Homology CDS 1362921 1363130 . + 0 ID=cds1214;Parent=gene1240;Dbxref=Genbank:WP_038400151.1;Name=WP_038400151.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400151.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1363798 1364418 . + . ID=gene1241;Name=DJ40_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06235;old_locus_tag=DJ40_1250 NZ_CP008943.1 Protein Homology CDS 1363798 1364418 . + 0 ID=cds1215;Parent=gene1241;Dbxref=Genbank:WP_038400153.1;Name=WP_038400153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400153.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1364721 1364900 . + . ID=gene1242;Name=DJ40_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06240 NZ_CP008943.1 GeneMarkS+ CDS 1364721 1364900 . + 0 ID=cds1216;Parent=gene1242;Dbxref=Genbank:WP_038400155.1;Name=WP_038400155.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1364902 1365885 . - . ID=gene1243;Name=DJ40_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06245;old_locus_tag=DJ40_1251 NZ_CP008943.1 Protein Homology CDS 1364902 1365885 . - 0 ID=cds1217;Parent=gene1243;Dbxref=Genbank:WP_038400157.1;Name=WP_038400157.1;gbkey=CDS;product=molecular chaperone Tir;protein_id=WP_038400157.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1366122 1366841 . + . ID=gene1244;Name=DJ40_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06250;old_locus_tag=DJ40_1252 NZ_CP008943.1 Protein Homology CDS 1366122 1366841 . + 0 ID=cds1218;Parent=gene1244;Dbxref=Genbank:WP_038400160.1;Name=WP_038400160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400160.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1366851 1367963 . + . ID=gene1245;Name=DJ40_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06255;old_locus_tag=DJ40_1253 NZ_CP008943.1 Protein Homology CDS 1366851 1367963 . + 0 ID=cds1219;Parent=gene1245;Dbxref=Genbank:WP_038400162.1;Name=WP_038400162.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_038400162.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1368205 1369980 . - . ID=gene1246;Name=DJ40_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06260;old_locus_tag=DJ40_1254 NZ_CP008943.1 Protein Homology CDS 1368205 1369980 . - 0 ID=cds1220;Parent=gene1246;Dbxref=Genbank:WP_038400164.1;Name=WP_038400164.1;gbkey=CDS;product=nucleotidyltransferase;protein_id=WP_038400164.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1369977 1371125 . - . ID=gene1247;Name=DJ40_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06265;old_locus_tag=DJ40_1255 NZ_CP008943.1 Protein Homology CDS 1369977 1371125 . - 0 ID=cds1221;Parent=gene1247;Dbxref=Genbank:WP_038400166.1;Name=WP_038400166.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400166.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1371244 1372506 . - . ID=gene1248;Name=DJ40_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06270;old_locus_tag=DJ40_1256 NZ_CP008943.1 Protein Homology CDS 1371244 1372506 . - 0 ID=cds1222;Parent=gene1248;Dbxref=Genbank:WP_038400167.1;Name=WP_038400167.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400167.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1372510 1374525 . - . ID=gene1249;Name=DJ40_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06275;old_locus_tag=DJ40_1257 NZ_CP008943.1 Protein Homology CDS 1372510 1374525 . - 0 ID=cds1223;Parent=gene1249;Dbxref=Genbank:WP_038400169.1;Name=WP_038400169.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_038400169.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1374566 1377238 . - . ID=gene1250;Name=DJ40_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06280;old_locus_tag=DJ40_1258 NZ_CP008943.1 Protein Homology CDS 1374566 1377238 . - 0 ID=cds1224;Parent=gene1250;Dbxref=Genbank:WP_038400171.1;Name=WP_038400171.1;gbkey=CDS;product=methyltransferase;protein_id=WP_038400171.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1377910 1379124 . - . ID=gene1251;Name=DJ40_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06285;old_locus_tag=DJ40_1259 NZ_CP008943.1 Protein Homology CDS 1377910 1379124 . - 0 ID=cds1225;Parent=gene1251;Dbxref=Genbank:WP_038400173.1;Name=WP_038400173.1;gbkey=CDS;product=integrase;protein_id=WP_038400173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1379300 1379376 . - . ID=gene1252;Name=DJ40_RS06290;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS06290;old_locus_tag=DJ40_1260 NZ_CP008943.1 tRNAscan-SE tRNA 1379300 1379376 . - . ID=rna22;Parent=gene1252;anticodon=(pos:complement(1379340..1379342));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 tRNAscan-SE exon 1379300 1379376 . - . ID=id72;Parent=rna22;anticodon=(pos:complement(1379340..1379342));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 RefSeq gene 1379592 1380458 . + . ID=gene1253;Name=DJ40_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06295;old_locus_tag=DJ40_1261 NZ_CP008943.1 Protein Homology CDS 1379592 1380458 . + 0 ID=cds1226;Parent=gene1253;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1380473 1380685 . + . ID=gene1254;Name=DJ40_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06300;old_locus_tag=DJ40_1262 NZ_CP008943.1 Protein Homology CDS 1380473 1380685 . + 0 ID=cds1227;Parent=gene1254;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1380907 1382292 . - . ID=gene1255;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=DJ40_RS06305;old_locus_tag=DJ40_1263 NZ_CP008943.1 Protein Homology CDS 1380907 1382292 . - 0 ID=cds1228;Parent=gene1255;Dbxref=Genbank:WP_024063201.1;Name=WP_024063201.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_024063201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1382503 1382997 . + . ID=gene1256;Name=DJ40_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06310;old_locus_tag=DJ40_1264 NZ_CP008943.1 Protein Homology CDS 1382503 1382997 . + 0 ID=cds1229;Parent=gene1256;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1383008 1383730 . + . ID=gene1257;Name=DJ40_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06315;old_locus_tag=DJ40_1265 NZ_CP008943.1 Protein Homology CDS 1383008 1383730 . + 0 ID=cds1230;Parent=gene1257;Dbxref=Genbank:WP_002208568.1;Name=WP_002208568.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_002208568.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1384026 1384550 . + . ID=gene1258;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=DJ40_RS06320;old_locus_tag=DJ40_1266 NZ_CP008943.1 Protein Homology CDS 1384026 1384550 . + 0 ID=cds1231;Parent=gene1258;Dbxref=Genbank:WP_032466182.1;Name=WP_032466182.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_032466182.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1384547 1385611 . + . ID=gene1259;Name=DJ40_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06325;old_locus_tag=DJ40_1267 NZ_CP008943.1 Protein Homology CDS 1384547 1385611 . + 0 ID=cds1232;Parent=gene1259;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1385655 1388084 . - . ID=gene1260;Name=DJ40_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06330;old_locus_tag=DJ40_1268 NZ_CP008943.1 Protein Homology CDS 1385655 1388084 . - 0 ID=cds1233;Parent=gene1260;Dbxref=Genbank:WP_032466184.1;Name=WP_032466184.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_032466184.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1388081 1388767 . - . ID=gene1261;Name=DJ40_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06335;old_locus_tag=DJ40_1269 NZ_CP008943.1 Protein Homology CDS 1388081 1388767 . - 0 ID=cds1234;Parent=gene1261;Dbxref=Genbank:WP_011191895.1;Name=WP_011191895.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_011191895.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1388738 1389373 . + . ID=gene1262;Name=DJ40_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06340;old_locus_tag=DJ40_1270 NZ_CP008943.1 Protein Homology CDS 1388738 1389373 . + 0 ID=cds1235;Parent=gene1262;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1389760 1390536 . + . ID=gene1263;Name=DJ40_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06345;old_locus_tag=DJ40_1271 NZ_CP008943.1 Protein Homology CDS 1389760 1390536 . + 0 ID=cds1236;Parent=gene1263;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1390613 1391482 . + . ID=gene1264;Name=DJ40_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06350;old_locus_tag=DJ40_1272 NZ_CP008943.1 Protein Homology CDS 1390613 1391482 . + 0 ID=cds1237;Parent=gene1264;Dbxref=Genbank:WP_032466185.1;Name=WP_032466185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466185.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1391677 1392591 . + . ID=gene1265;Name=DJ40_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06355;old_locus_tag=DJ40_1273 NZ_CP008943.1 Protein Homology CDS 1391677 1392591 . + 0 ID=cds1238;Parent=gene1265;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1392594 1393043 . + . ID=gene1266;Name=DJ40_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06360;old_locus_tag=DJ40_1274 NZ_CP008943.1 Protein Homology CDS 1392594 1393043 . + 0 ID=cds1239;Parent=gene1266;Dbxref=Genbank:WP_002208577.1;Name=WP_002208577.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208577.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1393223 1393642 . - . ID=gene1267;Name=DJ40_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06365;old_locus_tag=DJ40_1275 NZ_CP008943.1 Protein Homology CDS 1393223 1393642 . - 0 ID=cds1240;Parent=gene1267;Dbxref=Genbank:WP_002208578.1;Name=WP_002208578.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208578.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1393849 1396734 . + . ID=gene1268;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=DJ40_RS06370;old_locus_tag=DJ40_1276 NZ_CP008943.1 Protein Homology CDS 1393849 1396734 . + 0 ID=cds1241;Parent=gene1268;Dbxref=Genbank:WP_011191893.1;Name=WP_011191893.1;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=WP_011191893.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1396883 1397692 . + . ID=gene1269;Name=DJ40_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06375;old_locus_tag=DJ40_1277 NZ_CP008943.1 Protein Homology CDS 1396883 1397692 . + 0 ID=cds1242;Parent=gene1269;Dbxref=Genbank:WP_002208580.1;Name=WP_002208580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208580.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1397956 1398435 . + . ID=gene1270;Name=DJ40_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06380;old_locus_tag=DJ40_1278 NZ_CP008943.1 Protein Homology CDS 1397956 1398435 . + 0 ID=cds1243;Parent=gene1270;Dbxref=Genbank:WP_032466186.1;Name=WP_032466186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1398501 1398758 . + . ID=gene1271;Name=DJ40_RS06385;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS06385;old_locus_tag=DJ40_1279 NZ_CP008943.1 RefSeq repeat_region 1398516 1398685 . + . ID=id73;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1398772 1399011 . + . ID=gene1272;Name=DJ40_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06390;old_locus_tag=DJ40_1280 NZ_CP008943.1 Protein Homology CDS 1398772 1399011 . + 0 ID=cds1244;Parent=gene1272;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1399592 1399816 . - . ID=gene1273;Name=DJ40_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21850;old_locus_tag=DJ40_1282 NZ_CP008943.1 Protein Homology CDS 1399592 1399816 . - 0 ID=cds1245;Parent=gene1273;Dbxref=Genbank:WP_049862776.1;Name=WP_049862776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862776.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1399625 1400218 . + . ID=id74;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1399818 1400654 . - . ID=gene1274;Name=DJ40_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06400;old_locus_tag=DJ40_1283 NZ_CP008943.1 Protein Homology CDS 1399818 1400654 . - 0 ID=cds1246;Parent=gene1274;Dbxref=Genbank:WP_038400176.1;Name=WP_038400176.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400176.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1400705 1401301 . - . ID=gene1275;Name=DJ40_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06405;old_locus_tag=DJ40_1284 NZ_CP008943.1 Protein Homology CDS 1400705 1401301 . - 0 ID=cds1247;Parent=gene1275;Dbxref=Genbank:WP_038400177.1;Name=WP_038400177.1;gbkey=CDS;product=phage tail protein;protein_id=WP_038400177.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1401298 1402431 . - . ID=gene1276;Name=DJ40_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06410;old_locus_tag=DJ40_1285 NZ_CP008943.1 Protein Homology CDS 1401298 1402431 . - 0 ID=cds1248;Parent=gene1276;Dbxref=Genbank:WP_038400178.1;Name=WP_038400178.1;gbkey=CDS;product=phage baseplate J-like protein;protein_id=WP_038400178.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1402435 1402872 . - . ID=gene1277;Name=DJ40_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06415;old_locus_tag=DJ40_1286 NZ_CP008943.1 Protein Homology CDS 1402435 1402872 . - 0 ID=cds1249;Parent=gene1277;Dbxref=Genbank:WP_038400179.1;Name=WP_038400179.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400179.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1402869 1403462 . - . ID=gene1278;Name=DJ40_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06420;old_locus_tag=DJ40_1287 NZ_CP008943.1 Protein Homology CDS 1402869 1403462 . - 0 ID=cds1250;Parent=gene1278;Dbxref=Genbank:WP_012304446.1;Name=WP_012304446.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_012304446.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1403462 1404532 . - . ID=gene1279;Name=DJ40_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06425;old_locus_tag=DJ40_1288 NZ_CP008943.1 Protein Homology CDS 1403462 1404532 . - 0 ID=cds1251;Parent=gene1279;Dbxref=Genbank:WP_038400180.1;Name=WP_038400180.1;gbkey=CDS;product=tail protein;protein_id=WP_038400180.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1404529 1405935 . - . ID=gene1280;Name=DJ40_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06430;old_locus_tag=DJ40_1289 NZ_CP008943.1 Protein Homology CDS 1404529 1405935 . - 0 ID=cds1252;Parent=gene1280;Dbxref=Genbank:WP_012304448.1;Name=WP_012304448.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304448.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1405999 1406538 . - . ID=gene1281;Name=DJ40_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06435;old_locus_tag=DJ40_1290 NZ_CP008943.1 Protein Homology CDS 1405999 1406538 . - 0 ID=cds1253;Parent=gene1281;Dbxref=Genbank:WP_038400182.1;Name=WP_038400182.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400182.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1406642 1408588 . - . ID=gene1282;Name=DJ40_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06440;old_locus_tag=DJ40_1291 NZ_CP008943.1 Protein Homology CDS 1406642 1408588 . - 0 ID=cds1254;Parent=gene1282;Dbxref=Genbank:WP_012304450.1;Name=WP_012304450.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304450.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1408711 1409010 . - . ID=gene1283;Name=DJ40_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06445;old_locus_tag=DJ40_1292 NZ_CP008943.1 Protein Homology CDS 1408711 1409010 . - 0 ID=cds1255;Parent=gene1283;Dbxref=Genbank:WP_012304451.1;Name=WP_012304451.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304451.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1409012 1409386 . - . ID=gene1284;Name=DJ40_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06450;old_locus_tag=DJ40_1293 NZ_CP008943.1 Protein Homology CDS 1409012 1409386 . - 0 ID=cds1256;Parent=gene1284;Dbxref=Genbank:WP_012304452.1;Name=WP_012304452.1;gbkey=CDS;product=phage tail protein;protein_id=WP_012304452.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1409399 1410907 . - . ID=gene1285;Name=DJ40_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06455;old_locus_tag=DJ40_1294 NZ_CP008943.1 Protein Homology CDS 1409399 1410907 . - 0 ID=cds1257;Parent=gene1285;Dbxref=Genbank:WP_038400184.1;Name=WP_038400184.1;gbkey=CDS;product=tail protein;protein_id=WP_038400184.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1410907 1411098 . - . ID=gene1286;Name=DJ40_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06460;old_locus_tag=DJ40_1295 NZ_CP008943.1 Protein Homology CDS 1410907 1411098 . - 0 ID=cds1258;Parent=gene1286;Dbxref=Genbank:WP_038400186.1;Name=WP_038400186.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038400186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1411104 1411601 . - . ID=gene1287;Name=DJ40_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06465;old_locus_tag=DJ40_1296 NZ_CP008943.1 Protein Homology CDS 1411104 1411601 . - 0 ID=cds1259;Parent=gene1287;Dbxref=Genbank:WP_038400188.1;Name=WP_038400188.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_038400188.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1411678 1411926 . - . ID=gene1288;Name=DJ40_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06470;old_locus_tag=DJ40_1297 NZ_CP008943.1 Protein Homology CDS 1411678 1411926 . - 0 ID=cds1260;Parent=gene1288;Dbxref=Genbank:WP_038400190.1;Name=WP_038400190.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400190.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1412047 1412631 . - . ID=gene1289;Name=DJ40_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06475;old_locus_tag=DJ40_1298 NZ_CP008943.1 Protein Homology CDS 1412047 1412631 . - 0 ID=cds1261;Parent=gene1289;Dbxref=Genbank:WP_038400192.1;Name=WP_038400192.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400192.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1412967 1413488 . - . ID=gene1290;Name=DJ40_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06480;old_locus_tag=DJ40_1299 NZ_CP008943.1 Protein Homology CDS 1412967 1413488 . - 0 ID=cds1262;Parent=gene1290;Dbxref=Genbank:WP_038400194.1;Name=WP_038400194.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400194.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1413510 1414217 . - . ID=gene1291;Name=DJ40_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06485;old_locus_tag=DJ40_1300 NZ_CP008943.1 Protein Homology CDS 1413510 1414217 . - 0 ID=cds1263;Parent=gene1291;Dbxref=Genbank:WP_038400196.1;Name=WP_038400196.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400196.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1414307 1414654 . - . ID=gene1292;Name=DJ40_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06490;old_locus_tag=DJ40_1301 NZ_CP008943.1 Protein Homology CDS 1414307 1414654 . - 0 ID=cds1264;Parent=gene1292;Dbxref=Genbank:WP_038400197.1;Name=WP_038400197.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400197.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1415089 1415536 . + . ID=gene1293;Name=DJ40_RS21855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21855;old_locus_tag=DJ40_1303;pseudo=true NZ_CP008943.1 Protein Homology CDS 1415089 1415536 . + 0 ID=cds1265;Parent=gene1293;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1415645 1416298 . - . ID=gene1294;Name=DJ40_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06500;old_locus_tag=DJ40_1304 NZ_CP008943.1 Protein Homology CDS 1415645 1416298 . - 0 ID=cds1266;Parent=gene1294;Dbxref=Genbank:WP_038400199.1;Name=WP_038400199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400199.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1416301 1417299 . - . ID=gene1295;Name=DJ40_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06505;old_locus_tag=DJ40_1305 NZ_CP008943.1 Protein Homology CDS 1416301 1417299 . - 0 ID=cds1267;Parent=gene1295;Dbxref=Genbank:WP_038400202.1;Name=WP_038400202.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400202.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1417517 1417768 . - . ID=gene1296;Name=DJ40_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06510;old_locus_tag=DJ40_1306 NZ_CP008943.1 Protein Homology CDS 1417517 1417768 . - 0 ID=cds1268;Parent=gene1296;Dbxref=Genbank:WP_038400204.1;Name=WP_038400204.1;gbkey=CDS;product=pyocin activator protein PrtN;protein_id=WP_038400204.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1418551 1419609 . - . ID=gene1297;Name=DJ40_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06515;old_locus_tag=DJ40_1308 NZ_CP008943.1 Protein Homology CDS 1418551 1419609 . - 0 ID=cds1269;Parent=gene1297;Dbxref=Genbank:WP_049862809.1;Name=WP_049862809.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862809.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1419927 1420265 . - . ID=gene1298;Name=DJ40_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06520;old_locus_tag=DJ40_1309 NZ_CP008943.1 Protein Homology CDS 1419927 1420265 . - 0 ID=cds1270;Parent=gene1298;Dbxref=Genbank:WP_038400206.1;Name=WP_038400206.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400206.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1420262 1420576 . - . ID=gene1299;Name=DJ40_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06525 NZ_CP008943.1 Protein Homology CDS 1420262 1420576 . - 0 ID=cds1271;Parent=gene1299;Dbxref=Genbank:WP_049862777.1;Name=WP_049862777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862777.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1420569 1420766 . - . ID=gene1300;Name=DJ40_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06530;old_locus_tag=DJ40_1311 NZ_CP008943.1 GeneMarkS+ CDS 1420569 1420766 . - 0 ID=cds1272;Parent=gene1300;Dbxref=Genbank:WP_038400208.1;Name=WP_038400208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400208.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1420756 1420938 . - . ID=gene1301;Name=DJ40_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06535;old_locus_tag=DJ40_1312 NZ_CP008943.1 Protein Homology CDS 1420756 1420938 . - 0 ID=cds1273;Parent=gene1301;Dbxref=Genbank:WP_038400210.1;Name=WP_038400210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400210.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1420919 1421113 . - . ID=gene1302;Name=DJ40_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06540;old_locus_tag=DJ40_1313 NZ_CP008943.1 Protein Homology CDS 1420919 1421113 . - 0 ID=cds1274;Parent=gene1302;Dbxref=Genbank:WP_012303527.1;Name=WP_012303527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303527.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1421106 1421480 . - . ID=gene1303;Name=DJ40_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06545;old_locus_tag=DJ40_1314 NZ_CP008943.1 Protein Homology CDS 1421106 1421480 . - 0 ID=cds1275;Parent=gene1303;Dbxref=Genbank:WP_012303526.1;Name=WP_012303526.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303526.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1421473 1421748 . - . ID=gene1304;Name=DJ40_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06550;old_locus_tag=DJ40_1315 NZ_CP008943.1 Protein Homology CDS 1421473 1421748 . - 0 ID=cds1276;Parent=gene1304;Dbxref=Genbank:WP_038401606.1;Name=WP_038401606.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401606.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1421963 1422301 . + . ID=gene1305;Name=DJ40_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06555;old_locus_tag=DJ40_1316 NZ_CP008943.1 Protein Homology CDS 1421963 1422301 . + 0 ID=cds1277;Parent=gene1305;Dbxref=Genbank:WP_038400213.1;Name=WP_038400213.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400213.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1422535 1422816 . + . ID=gene1306;Name=DJ40_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06560;old_locus_tag=DJ40_1317 NZ_CP008943.1 Protein Homology CDS 1422535 1422816 . + 0 ID=cds1278;Parent=gene1306;Dbxref=Genbank:WP_038400215.1;Name=WP_038400215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400215.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1422821 1423171 . + . ID=gene1307;Name=DJ40_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06565;old_locus_tag=DJ40_1318 NZ_CP008943.1 Protein Homology CDS 1422821 1423171 . + 0 ID=cds1279;Parent=gene1307;Dbxref=Genbank:WP_038400217.1;Name=WP_038400217.1;gbkey=CDS;product=glycosyl transferase family 1;protein_id=WP_038400217.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1423517 1424053 . - . ID=gene1308;Name=DJ40_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06570;old_locus_tag=DJ40_1319 NZ_CP008943.1 Protein Homology CDS 1423517 1424053 . - 0 ID=cds1280;Parent=gene1308;Dbxref=Genbank:WP_049862778.1;Name=WP_049862778.1;gbkey=CDS;product=antirepressor protein;protein_id=WP_049862778.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1424214 1424786 . - . ID=gene1309;Name=DJ40_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06575;old_locus_tag=DJ40_1320 NZ_CP008943.1 Protein Homology CDS 1424214 1424786 . - 0 ID=cds1281;Parent=gene1309;Dbxref=Genbank:WP_049862810.1;Name=WP_049862810.1;gbkey=CDS;product=antirepressor protein;protein_id=WP_049862810.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1424963 1425181 . - . ID=gene1310;Name=DJ40_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06580;old_locus_tag=DJ40_1321 NZ_CP008943.1 Protein Homology CDS 1424963 1425181 . - 0 ID=cds1282;Parent=gene1310;Dbxref=Genbank:WP_038400221.1;Name=WP_038400221.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400221.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1425219 1426469 . - . ID=gene1311;Name=DJ40_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06585;old_locus_tag=DJ40_1322 NZ_CP008943.1 Protein Homology CDS 1425219 1426469 . - 0 ID=cds1283;Parent=gene1311;Dbxref=Genbank:WP_038400223.1;Name=WP_038400223.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400223.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1426640 1428088 . - . ID=gene1312;Name=DJ40_RS06590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS06590;old_locus_tag=DJ40_1323;partial=true;pseudo=true;start_range=.,1426640 NZ_CP008943.1 Protein Homology CDS 1426640 1428088 . - 0 ID=cds1284;Parent=gene1312;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=capsid protein;pseudo=true;start_range=.,1426640;transl_table=11 NZ_CP008943.1 RefSeq gene 1428157 1428402 . - . ID=gene1313;Name=DJ40_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06595;old_locus_tag=DJ40_1324 NZ_CP008943.1 Protein Homology CDS 1428157 1428402 . - 0 ID=cds1285;Parent=gene1313;Dbxref=Genbank:WP_038400225.1;Name=WP_038400225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400225.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1428411 1430519 . - . ID=gene1314;Name=DJ40_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06600;old_locus_tag=DJ40_1325 NZ_CP008943.1 Protein Homology CDS 1428411 1430519 . - 0 ID=cds1286;Parent=gene1314;Dbxref=Genbank:WP_038400227.1;Name=WP_038400227.1;gbkey=CDS;product=terminase;protein_id=WP_038400227.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1430461 1431027 . - . ID=gene1315;Name=DJ40_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06605;old_locus_tag=DJ40_1326 NZ_CP008943.1 Protein Homology CDS 1430461 1431027 . - 0 ID=cds1287;Parent=gene1315;Dbxref=Genbank:WP_038400229.1;Name=WP_038400229.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400229.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1431307 1431951 . - . ID=gene1316;Name=DJ40_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06610;old_locus_tag=DJ40_1327 NZ_CP008943.1 Protein Homology CDS 1431307 1431951 . - 0 ID=cds1288;Parent=gene1316;Dbxref=Genbank:WP_038400232.1;Name=WP_038400232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400232.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1432323 1432571 . - . ID=gene1317;Name=DJ40_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06615;old_locus_tag=DJ40_1328 NZ_CP008943.1 Protein Homology CDS 1432323 1432571 . - 0 ID=cds1289;Parent=gene1317;Dbxref=Genbank:WP_038400234.1;Name=WP_038400234.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400234.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1432852 1433184 . - . ID=gene1318;Name=DJ40_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06625;old_locus_tag=DJ40_1329 NZ_CP008943.1 Protein Homology CDS 1432852 1433184 . - 0 ID=cds1290;Parent=gene1318;Dbxref=Genbank:WP_038400237.1;Name=WP_038400237.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400237.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1433181 1433807 . - . ID=gene1319;Name=DJ40_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06630;old_locus_tag=DJ40_1330 NZ_CP008943.1 Protein Homology CDS 1433181 1433807 . - 0 ID=cds1291;Parent=gene1319;Dbxref=Genbank:WP_038400238.1;Name=WP_038400238.1;gbkey=CDS;product=endolysin;protein_id=WP_038400238.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1433811 1434161 . - . ID=gene1320;Name=DJ40_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06635;old_locus_tag=DJ40_1331 NZ_CP008943.1 Protein Homology CDS 1433811 1434161 . - 0 ID=cds1292;Parent=gene1320;Dbxref=Genbank:WP_038400240.1;Name=WP_038400240.1;gbkey=CDS;product=holin;protein_id=WP_038400240.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1434359 1434733 . + . ID=gene1321;Name=DJ40_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21860;old_locus_tag=DJ40_1332 NZ_CP008943.1 Protein Homology CDS 1434359 1434733 . + 0 ID=cds1293;Parent=gene1321;Dbxref=Genbank:WP_049862779.1;Name=WP_049862779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862779.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1434960 1436021 . - . ID=gene1322;Name=DJ40_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06645;old_locus_tag=DJ40_1333 NZ_CP008943.1 Protein Homology CDS 1434960 1436021 . - 0 ID=cds1294;Parent=gene1322;Dbxref=Genbank:WP_038400242.1;Name=WP_038400242.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_038400242.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1436377 1437195 . - . ID=gene1323;Name=DJ40_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06650;old_locus_tag=DJ40_1334 NZ_CP008943.1 Protein Homology CDS 1436377 1437195 . - 0 ID=cds1295;Parent=gene1323;Dbxref=Genbank:WP_038400244.1;Name=WP_038400244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400244.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1437272 1438303 . - . ID=gene1324;Name=DJ40_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06655;old_locus_tag=DJ40_1335 NZ_CP008943.1 Protein Homology CDS 1437272 1438303 . - 0 ID=cds1296;Parent=gene1324;Dbxref=Genbank:WP_038400245.1;Name=WP_038400245.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400245.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1438300 1440042 . - . ID=gene1325;Name=DJ40_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06660;old_locus_tag=DJ40_1336 NZ_CP008943.1 Protein Homology CDS 1438300 1440042 . - 0 ID=cds1297;Parent=gene1325;Dbxref=Genbank:WP_038400247.1;Name=WP_038400247.1;gbkey=CDS;product=DNA methyltransferase;protein_id=WP_038400247.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1440093 1440299 . + . ID=gene1326;Name=DJ40_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06665;old_locus_tag=DJ40_1337 NZ_CP008943.1 Protein Homology CDS 1440093 1440299 . + 0 ID=cds1298;Parent=gene1326;Dbxref=Genbank:WP_038400249.1;Name=WP_038400249.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400249.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1440415 1442066 . - . ID=gene1327;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=pseudogene;locus_tag=DJ40_RS06670;pseudo=true NZ_CP008943.1 Protein Homology CDS 1440415 1442066 . - 0 ID=cds1299;Parent=gene1327;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ushA;product=5'-nucleotidase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1442348 1443562 . + . ID=gene1328;Name=DJ40_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06675;old_locus_tag=DJ40_1340 NZ_CP008943.1 Protein Homology CDS 1442348 1443562 . + 0 ID=cds1300;Parent=gene1328;Dbxref=Genbank:WP_032466188.1;Name=WP_032466188.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_032466188.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1443797 1445488 . + . ID=gene1329;Name=DJ40_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06680;old_locus_tag=DJ40_1341 NZ_CP008943.1 Protein Homology CDS 1443797 1445488 . + 0 ID=cds1301;Parent=gene1329;Dbxref=Genbank:WP_002208585.1;Name=WP_002208585.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_002208585.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1445585 1446889 . - . ID=gene1330;Name=DJ40_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06685;old_locus_tag=DJ40_1342 NZ_CP008943.1 Protein Homology CDS 1445585 1446889 . - 0 ID=cds1302;Parent=gene1330;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1447093 1448244 . - . ID=gene1331;Name=DJ40_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06690;old_locus_tag=DJ40_1343 NZ_CP008943.1 Protein Homology CDS 1447093 1448244 . - 0 ID=cds1303;Parent=gene1331;Dbxref=Genbank:WP_011191890.1;Name=WP_011191890.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_011191890.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1448719 1449249 . - . ID=gene1332;Name=DJ40_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06695;old_locus_tag=DJ40_1345 NZ_CP008943.1 Protein Homology CDS 1448719 1449249 . - 0 ID=cds1304;Parent=gene1332;Dbxref=Genbank:WP_038400251.1;Name=WP_038400251.1;gbkey=CDS;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=WP_038400251.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1449246 1449923 . - . ID=gene1333;Name=DJ40_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06700;old_locus_tag=DJ40_1346 NZ_CP008943.1 Protein Homology CDS 1449246 1449923 . - 0 ID=cds1305;Parent=gene1333;Dbxref=Genbank:WP_038400256.1;Name=WP_038400256.1;gbkey=CDS;product=WblY protein;protein_id=WP_038400256.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1449925 1450515 . - . ID=gene1334;Name=DJ40_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06705;old_locus_tag=DJ40_1347 NZ_CP008943.1 Protein Homology CDS 1449925 1450515 . - 0 ID=cds1306;Parent=gene1334;Dbxref=Genbank:WP_012413525.1;Name=WP_012413525.1;gbkey=CDS;product=phosphoheptose isomerase;protein_id=WP_012413525.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1450503 1451531 . - . ID=gene1335;Name=DJ40_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06710;old_locus_tag=DJ40_1348 NZ_CP008943.1 Protein Homology CDS 1450503 1451531 . - 0 ID=cds1307;Parent=gene1335;Dbxref=Genbank:WP_012413524.1;Name=WP_012413524.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_012413524.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1451549 1452577 . - . ID=gene1336;Name=DJ40_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06715;old_locus_tag=DJ40_1349 NZ_CP008943.1 Protein Homology CDS 1451549 1452577 . - 0 ID=cds1308;Parent=gene1336;Dbxref=Genbank:WP_012413523.1;Name=WP_012413523.1;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_012413523.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1452580 1453413 . - . ID=gene1337;Name=DJ40_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06720;old_locus_tag=DJ40_1350 NZ_CP008943.1 Protein Homology CDS 1452580 1453413 . - 0 ID=cds1309;Parent=gene1337;Dbxref=Genbank:WP_038400259.1;Name=WP_038400259.1;gbkey=CDS;product=NAD-dependent dehydratase;protein_id=WP_038400259.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1453647 1454780 . - . ID=gene1338;Name=DJ40_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06725;old_locus_tag=DJ40_1351 NZ_CP008943.1 Protein Homology CDS 1453647 1454780 . - 0 ID=cds1310;Parent=gene1338;Dbxref=Genbank:WP_038400267.1;Name=WP_038400267.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_038400267.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1454968 1456053 . - . ID=gene1339;Name=DJ40_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06730;old_locus_tag=DJ40_1352 NZ_CP008943.1 Protein Homology CDS 1454968 1456053 . - 0 ID=cds1311;Parent=gene1339;Dbxref=Genbank:WP_012413520.1;Name=WP_012413520.1;gbkey=CDS;product=flippase;protein_id=WP_012413520.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1456133 1457242 . - . ID=gene1340;Name=DJ40_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06735;old_locus_tag=DJ40_1353 NZ_CP008943.1 Protein Homology CDS 1456133 1457242 . - 0 ID=cds1312;Parent=gene1340;Dbxref=Genbank:WP_038400270.1;Name=WP_038400270.1;gbkey=CDS;product=group 1 glycosyl transferase;protein_id=WP_038400270.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1457277 1458314 . - . ID=gene1341;Name=DJ40_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06740;old_locus_tag=DJ40_1354 NZ_CP008943.1 Protein Homology CDS 1457277 1458314 . - 0 ID=cds1313;Parent=gene1341;Dbxref=Genbank:WP_049862780.1;Name=WP_049862780.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_049862780.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1458307 1459620 . - . ID=gene1342;Name=DJ40_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06745;old_locus_tag=DJ40_1355 NZ_CP008943.1 Protein Homology CDS 1458307 1459620 . - 0 ID=cds1314;Parent=gene1342;Dbxref=Genbank:WP_042592613.1;Name=WP_042592613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592613.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1459652 1460227 . - . ID=gene1343;Name=DJ40_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21865;old_locus_tag=DJ40_1356 NZ_CP008943.1 Protein Homology CDS 1459652 1460227 . - 0 ID=cds1315;Parent=gene1343;Dbxref=Genbank:WP_049862781.1;Name=WP_049862781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862781.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1461094 1461945 . - . ID=gene1344;Name=DJ40_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06755;old_locus_tag=DJ40_1357 NZ_CP008943.1 Protein Homology CDS 1461094 1461945 . - 0 ID=cds1316;Parent=gene1344;Dbxref=Genbank:WP_038400274.1;Name=WP_038400274.1;gbkey=CDS;product=CDP-abequose synthase;protein_id=WP_038400274.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1461985 1463298 . - . ID=gene1345;Name=DJ40_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06760;old_locus_tag=DJ40_1358 NZ_CP008943.1 Protein Homology CDS 1461985 1463298 . - 0 ID=cds1317;Parent=gene1345;Dbxref=Genbank:WP_011191881.1;Name=WP_011191881.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_011191881.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1463316 1464215 . - . ID=gene1346;Name=DJ40_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06765;old_locus_tag=DJ40_1359 NZ_CP008943.1 Protein Homology CDS 1463316 1464215 . - 0 ID=cds1318;Parent=gene1346;Dbxref=Genbank:WP_038401616.1;Name=WP_038401616.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_038401616.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1464394 1465167 . - . ID=gene1347;Name=DJ40_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06770;old_locus_tag=DJ40_1360 NZ_CP008943.1 Protein Homology CDS 1464394 1465167 . - 0 ID=cds1319;Parent=gene1347;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1465205 1466194 . - . ID=gene1348;Name=DJ40_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06775;old_locus_tag=DJ40_1361 NZ_CP008943.1 Protein Homology CDS 1465205 1466194 . - 0 ID=cds1320;Parent=gene1348;Dbxref=Genbank:WP_002208598.1;Name=WP_002208598.1;gbkey=CDS;product=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase;protein_id=WP_002208598.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1466792 1467754 . - . ID=gene1349;Name=DJ40_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06780;old_locus_tag=DJ40_1362 NZ_CP008943.1 Protein Homology CDS 1466792 1467754 . - 0 ID=cds1321;Parent=gene1349;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1467844 1468488 . - . ID=gene1350;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=DJ40_RS06785;old_locus_tag=DJ40_1363 NZ_CP008943.1 Protein Homology CDS 1467844 1468488 . - 0 ID=cds1322;Parent=gene1350;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1468715 1470589 . - . ID=gene1351;Name=DJ40_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06790;old_locus_tag=DJ40_1364 NZ_CP008943.1 Protein Homology CDS 1468715 1470589 . - 0 ID=cds1323;Parent=gene1351;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1470781 1471386 . - . ID=gene1352;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=DJ40_RS06795;old_locus_tag=DJ40_1365 NZ_CP008943.1 Protein Homology CDS 1470781 1471386 . - 0 ID=cds1324;Parent=gene1352;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1471386 1471718 . - . ID=gene1353;Name=DJ40_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06800;old_locus_tag=DJ40_1366 NZ_CP008943.1 Protein Homology CDS 1471386 1471718 . - 0 ID=cds1325;Parent=gene1353;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1471774 1473750 . - . ID=gene1354;Name=DJ40_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06805;old_locus_tag=DJ40_1367 NZ_CP008943.1 Protein Homology CDS 1471774 1473750 . - 0 ID=cds1326;Parent=gene1354;Dbxref=Genbank:WP_002208605.1;Name=WP_002208605.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1474406 1474969 . - . ID=gene1355;Name=DJ40_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06810;old_locus_tag=DJ40_1368 NZ_CP008943.1 Protein Homology CDS 1474406 1474969 . - 0 ID=cds1327;Parent=gene1355;Dbxref=Genbank:WP_012105567.1;Name=WP_012105567.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_012105567.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1475402 1475590 . + . ID=gene1356;Name=DJ40_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06815 NZ_CP008943.1 Protein Homology CDS 1475402 1475590 . + 0 ID=cds1328;Parent=gene1356;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1475789 1476325 . + . ID=gene1357;Name=DJ40_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06820;old_locus_tag=DJ40_1370 NZ_CP008943.1 Protein Homology CDS 1475789 1476325 . + 0 ID=cds1329;Parent=gene1357;Dbxref=Genbank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_002208610.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1476496 1476651 . + . ID=gene1358;Name=DJ40_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06825 NZ_CP008943.1 Protein Homology CDS 1476496 1476651 . + 0 ID=cds1330;Parent=gene1358;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1476991 1480353 . - . ID=gene1359;Name=DJ40_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06830;old_locus_tag=DJ40_1371 NZ_CP008943.1 Protein Homology CDS 1476991 1480353 . - 0 ID=cds1331;Parent=gene1359;Dbxref=Genbank:WP_038400279.1;Name=WP_038400279.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400279.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1480649 1481002 . - . ID=gene1360;Name=DJ40_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06835;old_locus_tag=DJ40_1372 NZ_CP008943.1 Protein Homology CDS 1480649 1481002 . - 0 ID=cds1332;Parent=gene1360;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1481015 1481671 . - . ID=gene1361;Name=DJ40_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06840;old_locus_tag=DJ40_1373 NZ_CP008943.1 Protein Homology CDS 1481015 1481671 . - 0 ID=cds1333;Parent=gene1361;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1481816 1483003 . + . ID=gene1362;Name=DJ40_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06845;old_locus_tag=DJ40_1374 NZ_CP008943.1 Protein Homology CDS 1481816 1483003 . + 0 ID=cds1334;Parent=gene1362;Dbxref=Genbank:WP_038400282.1;Name=WP_038400282.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_038400282.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1483020 1486172 . + . ID=gene1363;Name=DJ40_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06850;old_locus_tag=DJ40_1375 NZ_CP008943.1 Protein Homology CDS 1483020 1486172 . + 0 ID=cds1335;Parent=gene1363;Dbxref=Genbank:WP_011191874.1;Name=WP_011191874.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_011191874.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1486358 1486618 . + . ID=gene1364;Name=DJ40_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06855;old_locus_tag=DJ40_1376 NZ_CP008943.1 Protein Homology CDS 1486358 1486618 . + 0 ID=cds1336;Parent=gene1364;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1486634 1486777 . + . ID=gene1365;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=DJ40_RS06860;old_locus_tag=DJ40_1377 NZ_CP008943.1 Protein Homology CDS 1486634 1486777 . + 0 ID=cds1337;Parent=gene1365;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1487651 1488004 . + . ID=gene1366;Name=DJ40_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06865;old_locus_tag=DJ40_1378 NZ_CP008943.1 Protein Homology CDS 1487651 1488004 . + 0 ID=cds1338;Parent=gene1366;Dbxref=Genbank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1488163 1488531 . + . ID=gene1367;Name=DJ40_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06870;old_locus_tag=DJ40_1379 NZ_CP008943.1 Protein Homology CDS 1488163 1488531 . + 0 ID=cds1339;Parent=gene1367;Dbxref=Genbank:WP_025382853.1;Name=WP_025382853.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025382853.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1488580 1488783 . + . ID=gene1368;Name=DJ40_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06875;old_locus_tag=DJ40_1380 NZ_CP008943.1 Protein Homology CDS 1488580 1488783 . + 0 ID=cds1340;Parent=gene1368;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1489689 1490078 . + . ID=gene1369;Name=DJ40_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06880 NZ_CP008943.1 Protein Homology CDS 1489689 1490078 . + 0 ID=cds1341;Parent=gene1369;Dbxref=Genbank:WP_024063215.1;Name=WP_024063215.1;gbkey=CDS;product=alkyltransferase;protein_id=WP_024063215.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1490214 1490735 . - . ID=gene1370;Name=DJ40_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06885;old_locus_tag=DJ40_1382 NZ_CP008943.1 Protein Homology CDS 1490214 1490735 . - 0 ID=cds1342;Parent=gene1370;Dbxref=Genbank:WP_011191872.1;Name=WP_011191872.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191872.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1490992 1491852 . + . ID=gene1371;Name=DJ40_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06890;old_locus_tag=DJ40_1383 NZ_CP008943.1 Protein Homology CDS 1490992 1491852 . + 0 ID=cds1343;Parent=gene1371;Dbxref=Genbank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_002208625.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1492113 1493402 . - . ID=gene1372;Name=DJ40_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06895;old_locus_tag=DJ40_1384 NZ_CP008943.1 Protein Homology CDS 1492113 1493402 . - 0 ID=cds1344;Parent=gene1372;Dbxref=Genbank:WP_002228344.1;Name=WP_002228344.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_002228344.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1493442 1493780 . - . ID=gene1373;Name=DJ40_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06900;old_locus_tag=DJ40_1385 NZ_CP008943.1 Protein Homology CDS 1493442 1493780 . - 0 ID=cds1345;Parent=gene1373;Dbxref=Genbank:WP_002208627.1;Name=WP_002208627.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_002208627.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1494190 1496013 . - . ID=gene1374;Name=DJ40_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06905;old_locus_tag=DJ40_1386 NZ_CP008943.1 Protein Homology CDS 1494190 1496013 . - 0 ID=cds1346;Parent=gene1374;Dbxref=Genbank:WP_012304501.1;Name=WP_012304501.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_012304501.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1496006 1497772 . - . ID=gene1375;Name=DJ40_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06910;old_locus_tag=DJ40_1387 NZ_CP008943.1 Protein Homology CDS 1496006 1497772 . - 0 ID=cds1347;Parent=gene1375;Dbxref=Genbank:WP_012304502.1;Name=WP_012304502.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_012304502.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1497874 1498335 . - . ID=gene1376;Name=DJ40_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06915;old_locus_tag=DJ40_1388 NZ_CP008943.1 Protein Homology CDS 1497874 1498335 . - 0 ID=cds1348;Parent=gene1376;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1498461 1499501 . + . ID=gene1377;Name=DJ40_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06920;old_locus_tag=DJ40_1389 NZ_CP008943.1 Protein Homology CDS 1498461 1499501 . + 0 ID=cds1349;Parent=gene1377;Dbxref=Genbank:WP_002208631.1;Name=WP_002208631.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_002208631.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1499713 1500534 . - . ID=gene1378;Name=DJ40_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06925;old_locus_tag=DJ40_1390 NZ_CP008943.1 Protein Homology CDS 1499713 1500534 . - 0 ID=cds1350;Parent=gene1378;Dbxref=Genbank:WP_012105573.1;Name=WP_012105573.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_012105573.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1500639 1502342 . + . ID=gene1379;Name=DJ40_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06930;old_locus_tag=DJ40_1391 NZ_CP008943.1 Protein Homology CDS 1500639 1502342 . + 0 ID=cds1351;Parent=gene1379;Dbxref=Genbank:WP_032466149.1;Name=WP_032466149.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_032466149.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1502607 1503305 . + . ID=gene1380;Name=DJ40_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06935;old_locus_tag=DJ40_1392 NZ_CP008943.1 Protein Homology CDS 1502607 1503305 . + 0 ID=cds1352;Parent=gene1380;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1503391 1503798 . - . ID=gene1381;Name=DJ40_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06940;old_locus_tag=DJ40_1393 NZ_CP008943.1 Protein Homology CDS 1503391 1503798 . - 0 ID=cds1353;Parent=gene1381;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1504152 1504598 . - . ID=gene1382;Name=DJ40_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06945;old_locus_tag=DJ40_1394 NZ_CP008943.1 Protein Homology CDS 1504152 1504598 . - 0 ID=cds1354;Parent=gene1382;Dbxref=Genbank:WP_012105574.1;Name=WP_012105574.1;gbkey=CDS;product=transporter;protein_id=WP_012105574.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1504738 1506624 . - . ID=gene1383;Name=DJ40_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06950;old_locus_tag=DJ40_1395 NZ_CP008943.1 Protein Homology CDS 1504738 1506624 . - 0 ID=cds1355;Parent=gene1383;Dbxref=Genbank:WP_011191866.1;Name=WP_011191866.1;gbkey=CDS;product=folding chaperone;protein_id=WP_011191866.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1506925 1507197 . - . ID=gene1384;Name=DJ40_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06955;old_locus_tag=DJ40_1396 NZ_CP008943.1 Protein Homology CDS 1506925 1507197 . - 0 ID=cds1356;Parent=gene1384;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1507415 1509769 . - . ID=gene1385;Name=DJ40_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06960;old_locus_tag=DJ40_1397 NZ_CP008943.1 Protein Homology CDS 1507415 1509769 . - 0 ID=cds1357;Parent=gene1385;Dbxref=Genbank:WP_002208640.1;Name=WP_002208640.1;gbkey=CDS;product=peptidase;protein_id=WP_002208640.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1509964 1511235 . - . ID=gene1386;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=DJ40_RS06965;old_locus_tag=DJ40_1398 NZ_CP008943.1 Protein Homology CDS 1509964 1511235 . - 0 ID=cds1358;Parent=gene1386;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1511441 1512064 . - . ID=gene1387;Name=DJ40_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06970;old_locus_tag=DJ40_1399 NZ_CP008943.1 Protein Homology CDS 1511441 1512064 . - 0 ID=cds1359;Parent=gene1387;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1512526 1513830 . - . ID=gene1388;Name=DJ40_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06975;old_locus_tag=DJ40_1400 NZ_CP008943.1 Protein Homology CDS 1512526 1513830 . - 0 ID=cds1360;Parent=gene1388;Dbxref=Genbank:WP_002208643.1;Name=WP_002208643.1;gbkey=CDS;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1513903 1514088 . - . ID=gene1389;Name=DJ40_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06980;old_locus_tag=DJ40_1401 NZ_CP008943.1 Protein Homology CDS 1513903 1514088 . - 0 ID=cds1361;Parent=gene1389;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1514247 1514561 . - . ID=gene1390;Name=DJ40_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06985;old_locus_tag=DJ40_1402 NZ_CP008943.1 Protein Homology CDS 1514247 1514561 . - 0 ID=cds1362;Parent=gene1390;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1514916 1515494 . + . ID=gene1391;Name=DJ40_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS06990;old_locus_tag=DJ40_1403 NZ_CP008943.1 Protein Homology CDS 1514916 1515494 . + 0 ID=cds1363;Parent=gene1391;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1515611 1517089 . + . ID=gene1392;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=DJ40_RS06995;old_locus_tag=DJ40_1404 NZ_CP008943.1 Protein Homology CDS 1515611 1517089 . + 0 ID=cds1364;Parent=gene1392;Dbxref=Genbank:WP_012304507.1;Name=WP_012304507.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_012304507.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1517376 1518143 . + . ID=gene1393;Name=DJ40_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07000;old_locus_tag=DJ40_1405 NZ_CP008943.1 Protein Homology CDS 1517376 1518143 . + 0 ID=cds1365;Parent=gene1393;Dbxref=Genbank:WP_012105575.1;Name=WP_012105575.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_012105575.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1518513 1519469 . + . ID=gene1394;Name=DJ40_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07005;old_locus_tag=DJ40_1406 NZ_CP008943.1 Protein Homology CDS 1518513 1519469 . + 0 ID=cds1366;Parent=gene1394;Dbxref=Genbank:WP_024063310.1;Name=WP_024063310.1;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_024063310.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1519474 1521465 . + . ID=gene1395;Name=DJ40_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07010;old_locus_tag=DJ40_1407 NZ_CP008943.1 Protein Homology CDS 1519474 1521465 . + 0 ID=cds1367;Parent=gene1395;Dbxref=Genbank:WP_002208650.1;Name=WP_002208650.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1521455 1522069 . + . ID=gene1396;Name=DJ40_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07015;old_locus_tag=DJ40_1408 NZ_CP008943.1 Protein Homology CDS 1521455 1522069 . + 0 ID=cds1368;Parent=gene1396;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1522069 1522401 . + . ID=gene1397;Name=DJ40_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07020;old_locus_tag=DJ40_1409 NZ_CP008943.1 Protein Homology CDS 1522069 1522401 . + 0 ID=cds1369;Parent=gene1397;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1522415 1523302 . + . ID=gene1398;Name=DJ40_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07025;old_locus_tag=DJ40_1410 NZ_CP008943.1 Protein Homology CDS 1522415 1523302 . + 0 ID=cds1370;Parent=gene1398;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1523786 1525150 . + . ID=gene1399;Name=DJ40_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07030;old_locus_tag=DJ40_1411 NZ_CP008943.1 Protein Homology CDS 1523786 1525150 . + 0 ID=cds1371;Parent=gene1399;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1525274 1525765 . - . ID=gene1400;Name=DJ40_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07035;old_locus_tag=DJ40_1412 NZ_CP008943.1 Protein Homology CDS 1525274 1525765 . - 0 ID=cds1372;Parent=gene1400;Dbxref=Genbank:WP_002208655.1;Name=WP_002208655.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_002208655.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1525997 1526908 . + . ID=gene1401;Name=DJ40_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07040;old_locus_tag=DJ40_1413 NZ_CP008943.1 Protein Homology CDS 1525997 1526908 . + 0 ID=cds1373;Parent=gene1401;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1526871 1527461 . + . ID=gene1402;Name=DJ40_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07045;old_locus_tag=DJ40_1414 NZ_CP008943.1 Protein Homology CDS 1526871 1527461 . + 0 ID=cds1374;Parent=gene1402;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1527529 1528980 . - . ID=gene1403;Name=DJ40_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07050;old_locus_tag=DJ40_1415 NZ_CP008943.1 Protein Homology CDS 1527529 1528980 . - 0 ID=cds1375;Parent=gene1403;Dbxref=Genbank:WP_002208658.1;Name=WP_002208658.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_002208658.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1529078 1529248 . - . ID=gene1404;Name=DJ40_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07055 NZ_CP008943.1 Protein Homology CDS 1529078 1529248 . - 0 ID=cds1376;Parent=gene1404;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1529330 1529584 . + . ID=gene1405;Name=DJ40_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07060;old_locus_tag=DJ40_1416 NZ_CP008943.1 Protein Homology CDS 1529330 1529584 . + 0 ID=cds1377;Parent=gene1405;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1529589 1530509 . + . ID=gene1406;Name=DJ40_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07065;old_locus_tag=DJ40_1417 NZ_CP008943.1 Protein Homology CDS 1529589 1530509 . + 0 ID=cds1378;Parent=gene1406;Dbxref=Genbank:WP_011191863.1;Name=WP_011191863.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_011191863.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1530673 1532532 . + . ID=gene1407;Name=DJ40_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07070;old_locus_tag=DJ40_1418 NZ_CP008943.1 Protein Homology CDS 1530673 1532532 . + 0 ID=cds1379;Parent=gene1407;Dbxref=Genbank:WP_011191862.1;Name=WP_011191862.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_011191862.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1532673 1533158 . - . ID=gene1408;Name=DJ40_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07075;old_locus_tag=DJ40_1419 NZ_CP008943.1 Protein Homology CDS 1532673 1533158 . - 0 ID=cds1380;Parent=gene1408;Dbxref=Genbank:WP_038400292.1;Name=WP_038400292.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase;protein_id=WP_038400292.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1533151 1534140 . - . ID=gene1409;Name=DJ40_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07080;old_locus_tag=DJ40_1420 NZ_CP008943.1 Protein Homology CDS 1533151 1534140 . - 0 ID=cds1381;Parent=gene1409;Dbxref=Genbank:WP_011906382.1;Name=WP_011906382.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_011906382.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1534381 1534797 . - . ID=gene1410;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=DJ40_RS07085;old_locus_tag=DJ40_1421 NZ_CP008943.1 Protein Homology CDS 1534381 1534797 . - 0 ID=cds1382;Parent=gene1410;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1534818 1535288 . - . ID=gene1411;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=DJ40_RS07090;old_locus_tag=DJ40_1422 NZ_CP008943.1 Protein Homology CDS 1534818 1535288 . - 0 ID=cds1383;Parent=gene1411;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1535424 1536533 . - . ID=gene1412;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=DJ40_RS07095;old_locus_tag=DJ40_1423 NZ_CP008943.1 Protein Homology CDS 1535424 1536533 . - 0 ID=cds1384;Parent=gene1412;Dbxref=Genbank:WP_002208667.1;Name=WP_002208667.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_002208667.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1536683 1537132 . - . ID=gene1413;Name=DJ40_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07100;old_locus_tag=DJ40_1424 NZ_CP008943.1 Protein Homology CDS 1536683 1537132 . - 0 ID=cds1385;Parent=gene1413;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1537203 1537796 . - . ID=gene1414;Name=DJ40_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07105 NZ_CP008943.1 Protein Homology CDS 1537203 1537796 . - 0 ID=cds1386;Parent=gene1414;Dbxref=Genbank:WP_032466145.1;Name=WP_032466145.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466145.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1537829 1538525 . - . ID=gene1415;Name=DJ40_RS07110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS07110;pseudo=true NZ_CP008943.1 Protein Homology CDS 1537829 1538525 . - 0 ID=cds1387;Parent=gene1415;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1538712 1539430 . + . ID=id75;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1538822 1539280 . - . ID=gene1416;Name=DJ40_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07115;old_locus_tag=DJ40_1426 NZ_CP008943.1 Protein Homology CDS 1538822 1539280 . - 0 ID=cds1388;Parent=gene1416;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1539487 1540455 . - . ID=gene1417;Name=DJ40_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07120;old_locus_tag=DJ40_1427 NZ_CP008943.1 Protein Homology CDS 1539487 1540455 . - 0 ID=cds1389;Parent=gene1417;Dbxref=Genbank:WP_038400294.1;Name=WP_038400294.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_038400294.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1540466 1542280 . - . ID=gene1418;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=DJ40_RS07125;old_locus_tag=DJ40_1428 NZ_CP008943.1 Protein Homology CDS 1540466 1542280 . - 0 ID=cds1390;Parent=gene1418;Dbxref=Genbank:WP_002354695.1;Name=WP_002354695.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_002354695.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1542341 1542676 . - . ID=gene1419;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=DJ40_RS07130;old_locus_tag=DJ40_1429 NZ_CP008943.1 Protein Homology CDS 1542341 1542676 . - 0 ID=cds1391;Parent=gene1419;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1542788 1543912 . - . ID=gene1420;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=DJ40_RS07135;old_locus_tag=DJ40_1430 NZ_CP008943.1 Protein Homology CDS 1542788 1543912 . - 0 ID=cds1392;Parent=gene1420;Dbxref=Genbank:WP_002208672.1;Name=WP_002208672.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_002208672.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1544005 1545075 . - . ID=gene1421;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=DJ40_RS07140;old_locus_tag=DJ40_1431 NZ_CP008943.1 Protein Homology CDS 1544005 1545075 . - 0 ID=cds1393;Parent=gene1421;Dbxref=Genbank:WP_038400297.1;Name=WP_038400297.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_038400297.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1545278 1545859 . + . ID=gene1422;Name=DJ40_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07145;old_locus_tag=DJ40_1432 NZ_CP008943.1 Protein Homology CDS 1545278 1545859 . + 0 ID=cds1394;Parent=gene1422;Dbxref=Genbank:WP_002216927.1;Name=WP_002216927.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_002216927.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1546178 1546780 . + . ID=gene1423;Name=DJ40_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07150;old_locus_tag=DJ40_1433 NZ_CP008943.1 Protein Homology CDS 1546178 1546780 . + 0 ID=cds1395;Parent=gene1423;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1546869 1547000 . - . ID=gene1424;Name=DJ40_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07155 NZ_CP008943.1 Protein Homology CDS 1546869 1547000 . - 0 ID=cds1396;Parent=gene1424;Dbxref=Genbank:WP_002216930.1;Name=WP_002216930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1547169 1548932 . + . ID=gene1425;Name=DJ40_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07160;old_locus_tag=DJ40_1434 NZ_CP008943.1 Protein Homology CDS 1547169 1548932 . + 0 ID=cds1397;Parent=gene1425;Dbxref=Genbank:WP_038400299.1;Name=WP_038400299.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_038400299.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1549140 1549820 . - . ID=gene1426;Name=DJ40_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07165;old_locus_tag=DJ40_1435 NZ_CP008943.1 Protein Homology CDS 1549140 1549820 . - 0 ID=cds1398;Parent=gene1426;Dbxref=Genbank:WP_002208677.1;Name=WP_002208677.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002208677.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1549975 1551804 . - . ID=gene1427;Name=DJ40_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07170;old_locus_tag=DJ40_1436 NZ_CP008943.1 Protein Homology CDS 1549975 1551804 . - 0 ID=cds1399;Parent=gene1427;Dbxref=Genbank:WP_038400301.1;Name=WP_038400301.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_038400301.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1552417 1553811 . - . ID=gene1428;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=DJ40_RS07175;old_locus_tag=DJ40_1437 NZ_CP008943.1 Protein Homology CDS 1552417 1553811 . - 0 ID=cds1400;Parent=gene1428;Dbxref=Genbank:WP_012105585.1;Name=WP_012105585.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_012105585.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1553887 1555206 . - . ID=gene1429;Name=DJ40_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07180;old_locus_tag=DJ40_1438 NZ_CP008943.1 Protein Homology CDS 1553887 1555206 . - 0 ID=cds1401;Parent=gene1429;Dbxref=Genbank:WP_012105586.1;Name=WP_012105586.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_012105586.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1555680 1556762 . - . ID=gene1430;Name=DJ40_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07185;old_locus_tag=DJ40_1439 NZ_CP008943.1 Protein Homology CDS 1555680 1556762 . - 0 ID=cds1402;Parent=gene1430;Dbxref=Genbank:WP_038400303.1;Name=WP_038400303.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_038400303.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1556784 1558100 . - . ID=gene1431;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=DJ40_RS07190;old_locus_tag=DJ40_1440 NZ_CP008943.1 Protein Homology CDS 1556784 1558100 . - 0 ID=cds1403;Parent=gene1431;Dbxref=Genbank:WP_012304517.1;Name=WP_012304517.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_012304517.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1558125 1558814 . - . ID=gene1432;Name=DJ40_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07195;old_locus_tag=DJ40_1441 NZ_CP008943.1 Protein Homology CDS 1558125 1558814 . - 0 ID=cds1404;Parent=gene1432;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1558844 1558963 . - . ID=gene1433;Name=DJ40_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07200 NZ_CP008943.1 Protein Homology CDS 1558844 1558963 . - 0 ID=cds1405;Parent=gene1433;Dbxref=Genbank:WP_002208686.1;Name=WP_002208686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208686.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1559082 1560326 . + . ID=gene1434;Name=DJ40_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07205;old_locus_tag=DJ40_1442 NZ_CP008943.1 Protein Homology CDS 1559082 1560326 . + 0 ID=cds1406;Parent=gene1434;Dbxref=Genbank:WP_002208687.1;Name=WP_002208687.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease SbcD;protein_id=WP_002208687.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1560323 1564012 . + . ID=gene1435;Name=DJ40_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07210;old_locus_tag=DJ40_1443 NZ_CP008943.1 Protein Homology CDS 1560323 1564012 . + 0 ID=cds1407;Parent=gene1435;Dbxref=Genbank:WP_012105590.1;Name=WP_012105590.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_012105590.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1564357 1565271 . - . ID=gene1436;Name=DJ40_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07215;old_locus_tag=DJ40_1444 NZ_CP008943.1 Protein Homology CDS 1564357 1565271 . - 0 ID=cds1408;Parent=gene1436;Dbxref=Genbank:WP_002208690.1;Name=WP_002208690.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_002208690.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1565604 1566515 . + . ID=gene1437;Name=DJ40_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07220;old_locus_tag=DJ40_1445 NZ_CP008943.1 Protein Homology CDS 1565604 1566515 . + 0 ID=cds1409;Parent=gene1437;Dbxref=Genbank:WP_002208691.1;Name=WP_002208691.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1566737 1567024 . - . ID=gene1438;Name=DJ40_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07225;old_locus_tag=DJ40_1446 NZ_CP008943.1 Protein Homology CDS 1566737 1567024 . - 0 ID=cds1410;Parent=gene1438;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1567087 1567258 . - . ID=gene1439;Name=DJ40_RS07230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS07230;pseudo=true NZ_CP008943.1 Protein Homology CDS 1567087 1567258 . - 0 ID=cds1411;Parent=gene1439;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1567584 1568108 . - . ID=gene1440;Name=DJ40_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07235;old_locus_tag=DJ40_1447 NZ_CP008943.1 Protein Homology CDS 1567584 1568108 . - 0 ID=cds1412;Parent=gene1440;Dbxref=Genbank:WP_038401618.1;Name=WP_038401618.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_038401618.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1568355 1568912 . - . ID=gene1441;Name=DJ40_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07240;old_locus_tag=DJ40_1448 NZ_CP008943.1 Protein Homology CDS 1568355 1568912 . - 0 ID=cds1413;Parent=gene1441;Dbxref=Genbank:WP_011191850.1;Name=WP_011191850.1;gbkey=CDS;product=methyltransferase;protein_id=WP_011191850.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1569182 1569397 . + . ID=gene1442;Name=DJ40_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07245 NZ_CP008943.1 Protein Homology CDS 1569182 1569397 . + 0 ID=cds1414;Parent=gene1442;Dbxref=Genbank:WP_038400306.1;Name=WP_038400306.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400306.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1569644 1570207 . - . ID=gene1443;Name=DJ40_RS07250;end_range=1570207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS07250;old_locus_tag=DJ40_1449;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 1569644 1570207 . - 0 ID=cds1415;Parent=gene1443;end_range=1570207,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1570411 1570665 . - . ID=gene1444;Name=DJ40_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07255;old_locus_tag=DJ40_1450 NZ_CP008943.1 Protein Homology CDS 1570411 1570665 . - 0 ID=cds1416;Parent=gene1444;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1570863 1571612 . - . ID=gene1445;Name=DJ40_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07260;old_locus_tag=DJ40_1451 NZ_CP008943.1 Protein Homology CDS 1570863 1571612 . - 0 ID=cds1417;Parent=gene1445;Dbxref=Genbank:WP_012105592.1;Name=WP_012105592.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_012105592.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1571949 1573208 . - . ID=gene1446;Name=DJ40_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07265;old_locus_tag=DJ40_1452 NZ_CP008943.1 Protein Homology CDS 1571949 1573208 . - 0 ID=cds1418;Parent=gene1446;Dbxref=Genbank:WP_011191846.1;Name=WP_011191846.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_011191846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1573218 1574321 . - . ID=gene1447;Name=DJ40_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07270;old_locus_tag=DJ40_1453 NZ_CP008943.1 Protein Homology CDS 1573218 1574321 . - 0 ID=cds1419;Parent=gene1447;Dbxref=Genbank:WP_038400308.1;Name=WP_038400308.1;gbkey=CDS;product=gamma-glutamyl kinase;protein_id=WP_038400308.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1574498 1574899 . - . ID=gene1448;Name=DJ40_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07275;old_locus_tag=DJ40_1454 NZ_CP008943.1 Protein Homology CDS 1574498 1574899 . - 0 ID=cds1420;Parent=gene1448;Dbxref=Genbank:WP_002208702.1;Name=WP_002208702.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1574959 1576206 . - . ID=gene1449;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=DJ40_RS07280;old_locus_tag=DJ40_1455 NZ_CP008943.1 Protein Homology CDS 1574959 1576206 . - 0 ID=cds1421;Parent=gene1449;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1576333 1576791 . - . ID=gene1450;Name=DJ40_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07285;old_locus_tag=DJ40_1456 NZ_CP008943.1 Protein Homology CDS 1576333 1576791 . - 0 ID=cds1422;Parent=gene1450;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1577218 1577523 . + . ID=gene1451;Name=DJ40_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07290;old_locus_tag=DJ40_1457 NZ_CP008943.1 Protein Homology CDS 1577218 1577523 . + 0 ID=cds1423;Parent=gene1451;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1577720 1579324 . + . ID=gene1452;Name=DJ40_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07295;old_locus_tag=DJ40_1458 NZ_CP008943.1 Protein Homology CDS 1577720 1579324 . + 0 ID=cds1424;Parent=gene1452;Dbxref=Genbank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;product=chitin-binding domain protein;protein_id=WP_002208705.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1579357 1580076 . + . ID=id76;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1579510 1579968 . + . ID=gene1453;Name=DJ40_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07300;old_locus_tag=DJ40_1459 NZ_CP008943.1 Protein Homology CDS 1579510 1579968 . + 0 ID=cds1425;Parent=gene1453;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1580494 1581279 . - . ID=gene1454;Name=DJ40_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07305;old_locus_tag=DJ40_1460 NZ_CP008943.1 Protein Homology CDS 1580494 1581279 . - 0 ID=cds1426;Parent=gene1454;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1582127 1582282 . - . ID=gene1455;Name=DJ40_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07310 NZ_CP008943.1 Protein Homology CDS 1582127 1582282 . - 0 ID=cds1427;Parent=gene1455;Dbxref=Genbank:WP_032466136.1;Name=WP_032466136.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466136.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1583280 1584740 . + . ID=gene1456;Name=DJ40_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07315;old_locus_tag=DJ40_1461 NZ_CP008943.1 Protein Homology CDS 1583280 1584740 . + 0 ID=cds1428;Parent=gene1456;Dbxref=Genbank:WP_011191845.1;Name=WP_011191845.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_011191845.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1584854 1585912 . - . ID=gene1457;Name=DJ40_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07320;old_locus_tag=DJ40_1462 NZ_CP008943.1 Protein Homology CDS 1584854 1585912 . - 0 ID=cds1429;Parent=gene1457;Dbxref=Genbank:WP_011191844.1;Name=WP_011191844.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_011191844.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1586268 1587215 . + . ID=gene1458;Name=DJ40_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07325;old_locus_tag=DJ40_1463 NZ_CP008943.1 Protein Homology CDS 1586268 1587215 . + 0 ID=cds1430;Parent=gene1458;Dbxref=Genbank:WP_032466135.1;Name=WP_032466135.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_032466135.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1587489 1587716 . - . ID=gene1459;Name=DJ40_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07330;old_locus_tag=DJ40_1464 NZ_CP008943.1 Protein Homology CDS 1587489 1587716 . - 0 ID=cds1431;Parent=gene1459;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1587729 1588724 . - . ID=gene1460;Name=DJ40_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07335;old_locus_tag=DJ40_1465 NZ_CP008943.1 Protein Homology CDS 1587729 1588724 . - 0 ID=cds1432;Parent=gene1460;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1588792 1590015 . - . ID=gene1461;Name=DJ40_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07340;old_locus_tag=DJ40_1466 NZ_CP008943.1 Protein Homology CDS 1588792 1590015 . - 0 ID=cds1433;Parent=gene1461;Dbxref=Genbank:WP_002208711.1;Name=WP_002208711.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_002208711.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1590031 1590627 . - . ID=gene1462;Name=DJ40_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07345;old_locus_tag=DJ40_1467 NZ_CP008943.1 Protein Homology CDS 1590031 1590627 . - 0 ID=cds1434;Parent=gene1462;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1590634 1591263 . - . ID=gene1463;Name=DJ40_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07350;old_locus_tag=DJ40_1468 NZ_CP008943.1 Protein Homology CDS 1590634 1591263 . - 0 ID=cds1435;Parent=gene1463;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1591256 1592056 . - . ID=gene1464;Name=DJ40_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07355;old_locus_tag=DJ40_1469 NZ_CP008943.1 Protein Homology CDS 1591256 1592056 . - 0 ID=cds1436;Parent=gene1464;Dbxref=Genbank:WP_011191841.1;Name=WP_011191841.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_011191841.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1592046 1593287 . - . ID=gene1465;Name=DJ40_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07360;old_locus_tag=DJ40_1470 NZ_CP008943.1 Protein Homology CDS 1592046 1593287 . - 0 ID=cds1437;Parent=gene1465;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1593291 1594634 . - . ID=gene1466;Name=DJ40_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07365;old_locus_tag=DJ40_1471 NZ_CP008943.1 Protein Homology CDS 1593291 1594634 . - 0 ID=cds1438;Parent=gene1466;Dbxref=Genbank:WP_038400311.1;Name=WP_038400311.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_038400311.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1595130 1595870 . + . ID=gene1467;Name=DJ40_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07370;old_locus_tag=DJ40_1473 NZ_CP008943.1 Protein Homology CDS 1595130 1595870 . + 0 ID=cds1439;Parent=gene1467;Dbxref=Genbank:WP_011191840.1;Name=WP_011191840.1;gbkey=CDS;product=transpeptidase;protein_id=WP_011191840.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1595835 1596608 . - . ID=gene1468;Name=DJ40_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07375;old_locus_tag=DJ40_1472 NZ_CP008943.1 Protein Homology CDS 1595835 1596608 . - 0 ID=cds1440;Parent=gene1468;Dbxref=Genbank:WP_002208719.1;Name=WP_002208719.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1596811 1597392 . - . ID=gene1469;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=DJ40_RS07380;old_locus_tag=DJ40_1474 NZ_CP008943.1 Protein Homology CDS 1596811 1597392 . - 0 ID=cds1441;Parent=gene1469;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1597632 1600079 . + . ID=gene1470;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=DJ40_RS07385;old_locus_tag=DJ40_1475 NZ_CP008943.1 Protein Homology CDS 1597632 1600079 . + 0 ID=cds1442;Parent=gene1470;Dbxref=Genbank:WP_038400314.1;Name=WP_038400314.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_038400314.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1600251 1600997 . - . ID=gene1471;Name=DJ40_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07390;old_locus_tag=DJ40_1476 NZ_CP008943.1 Protein Homology CDS 1600251 1600997 . - 0 ID=cds1443;Parent=gene1471;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1600999 1602852 . - . ID=gene1472;Name=DJ40_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07395;old_locus_tag=DJ40_1477 NZ_CP008943.1 Protein Homology CDS 1600999 1602852 . - 0 ID=cds1444;Parent=gene1472;Dbxref=Genbank:WP_012304523.1;Name=WP_012304523.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_012304523.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1603007 1608745 . - . ID=gene1473;Name=DJ40_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07400;old_locus_tag=DJ40_1478 NZ_CP008943.1 Protein Homology CDS 1603007 1608745 . - 0 ID=cds1445;Parent=gene1473;Dbxref=Genbank:WP_038400316.1;Name=WP_038400316.1;gbkey=CDS;product=adhesin;protein_id=WP_038400316.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1608786 1610576 . - . ID=gene1474;Name=DJ40_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07405;old_locus_tag=DJ40_1479 NZ_CP008943.1 Protein Homology CDS 1608786 1610576 . - 0 ID=cds1446;Parent=gene1474;Dbxref=Genbank:WP_002214693.1;Name=WP_002214693.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002214693.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1611303 1611482 . + . ID=id77;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 1611699 1611810 . + . ID=id78;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1611913 1613136 . - . ID=gene1475;Name=DJ40_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07410;old_locus_tag=DJ40_1480 NZ_CP008943.1 Protein Homology CDS 1611913 1613136 . - 0 ID=cds1447;Parent=gene1475;Dbxref=Genbank:WP_012304528.1;Name=WP_012304528.1;gbkey=CDS;product=methylthioribose kinase;protein_id=WP_012304528.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1613332 1614372 . + . ID=gene1476;Name=DJ40_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07415;old_locus_tag=DJ40_1481 NZ_CP008943.1 Protein Homology CDS 1613332 1614372 . + 0 ID=cds1448;Parent=gene1476;Dbxref=Genbank:WP_011906391.1;Name=WP_011906391.1;gbkey=CDS;product=methylthioribose-1-phosphate isomerase;protein_id=WP_011906391.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1614405 1614947 . - . ID=gene1477;Name=DJ40_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07420;old_locus_tag=DJ40_1482 NZ_CP008943.1 Protein Homology CDS 1614405 1614947 . - 0 ID=cds1449;Parent=gene1477;Dbxref=Genbank:WP_011191833.1;Name=WP_011191833.1;gbkey=CDS;product=acireductone dioxygenase;protein_id=WP_011191833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1615020 1615709 . - . ID=gene1478;Name=DJ40_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07425;old_locus_tag=DJ40_1483 NZ_CP008943.1 Protein Homology CDS 1615020 1615709 . - 0 ID=cds1450;Parent=gene1478;Dbxref=Genbank:WP_011906392.1;Name=WP_011906392.1;gbkey=CDS;product=enolase-phosphatase E1;protein_id=WP_011906392.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1615706 1616374 . - . ID=gene1479;Name=DJ40_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07430;old_locus_tag=DJ40_1484 NZ_CP008943.1 Protein Homology CDS 1615706 1616374 . - 0 ID=cds1451;Parent=gene1479;Dbxref=Genbank:WP_011191831.1;Name=WP_011191831.1;Note=catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway;gbkey=CDS;product=methylthioribulose-1-phosphate dehydratase;protein_id=WP_011191831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1616645 1618507 . - . ID=gene1480;Name=DJ40_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21870;old_locus_tag=DJ40_1485 NZ_CP008943.1 Protein Homology CDS 1616645 1618507 . - 0 ID=cds1452;Parent=gene1480;Dbxref=Genbank:WP_049862782.1;Name=WP_049862782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862782.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1618650 1618901 . + . ID=gene1481;Name=DJ40_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07440;old_locus_tag=DJ40_1486 NZ_CP008943.1 Protein Homology CDS 1618650 1618901 . + 0 ID=cds1453;Parent=gene1481;Dbxref=Genbank:WP_038400318.1;Name=WP_038400318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400318.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1618918 1619565 . + . ID=gene1482;Name=DJ40_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07445;old_locus_tag=DJ40_1487 NZ_CP008943.1 Protein Homology CDS 1618918 1619565 . + 0 ID=cds1454;Parent=gene1482;Dbxref=Genbank:WP_038401622.1;Name=WP_038401622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1619584 1621449 . - . ID=gene1483;Name=DJ40_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07450;old_locus_tag=DJ40_1488 NZ_CP008943.1 Protein Homology CDS 1619584 1621449 . - 0 ID=cds1455;Parent=gene1483;Dbxref=Genbank:WP_038400320.1;Name=WP_038400320.1;gbkey=CDS;product=DNA transfer protein;protein_id=WP_038400320.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1621449 1622885 . - . ID=gene1484;Name=DJ40_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07455;old_locus_tag=DJ40_1489 NZ_CP008943.1 Protein Homology CDS 1621449 1622885 . - 0 ID=cds1456;Parent=gene1484;Dbxref=Genbank:WP_038400322.1;Name=WP_038400322.1;gbkey=CDS;product=DNA transfer protein;protein_id=WP_038400322.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1622971 1623165 . + . ID=gene1485;Name=DJ40_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07460 NZ_CP008943.1 GeneMarkS+ CDS 1622971 1623165 . + 0 ID=cds1457;Parent=gene1485;Dbxref=Genbank:WP_038400324.1;Name=WP_038400324.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400324.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1623208 1623459 . + . ID=gene1486;Name=DJ40_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07465;old_locus_tag=DJ40_1490 NZ_CP008943.1 Protein Homology CDS 1623208 1623459 . + 0 ID=cds1458;Parent=gene1486;Dbxref=Genbank:WP_038400326.1;Name=WP_038400326.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_038400326.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1623492 1624763 . + . ID=gene1487;Name=DJ40_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07470;old_locus_tag=DJ40_1491 NZ_CP008943.1 Protein Homology CDS 1623492 1624763 . + 0 ID=cds1459;Parent=gene1487;Dbxref=Genbank:WP_038400327.1;Name=WP_038400327.1;gbkey=CDS;product=integrase;protein_id=WP_038400327.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1624851 1626011 . + . ID=gene1488;Name=DJ40_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07475;old_locus_tag=DJ40_1492 NZ_CP008943.1 Protein Homology CDS 1624851 1626011 . + 0 ID=cds1460;Parent=gene1488;Dbxref=Genbank:WP_012105603.1;Name=WP_012105603.1;Note=catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine;gbkey=CDS;product=aminotransferase;protein_id=WP_012105603.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1625999 1626769 . + . ID=gene1489;Name=DJ40_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07480;old_locus_tag=DJ40_1493 NZ_CP008943.1 Protein Homology CDS 1625999 1626769 . + 0 ID=cds1461;Parent=gene1489;Dbxref=Genbank:WP_011906395.1;Name=WP_011906395.1;Note=NAD(P)-binding;gbkey=CDS;product=hypothetical protein;protein_id=WP_011906395.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1626825 1627139 . + . ID=id79;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1627118 1628401 . - . ID=gene1490;Name=DJ40_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07485;old_locus_tag=DJ40_1494 NZ_CP008943.1 Protein Homology CDS 1627118 1628401 . - 0 ID=cds1462;Parent=gene1490;Dbxref=Genbank:WP_038400330.1;Name=WP_038400330.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_038400330.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1628401 1629708 . - . ID=gene1491;Name=DJ40_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07490;old_locus_tag=DJ40_1495 NZ_CP008943.1 Protein Homology CDS 1628401 1629708 . - 0 ID=cds1463;Parent=gene1491;Dbxref=Genbank:WP_038400333.1;Name=WP_038400333.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_038400333.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1629740 1630486 . - . ID=gene1492;Name=DJ40_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07495;old_locus_tag=DJ40_1496 NZ_CP008943.1 Protein Homology CDS 1629740 1630486 . - 0 ID=cds1464;Parent=gene1492;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1630467 1631120 . - . ID=gene1493;Name=DJ40_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07500;old_locus_tag=DJ40_1497 NZ_CP008943.1 Protein Homology CDS 1630467 1631120 . - 0 ID=cds1465;Parent=gene1493;Dbxref=Genbank:WP_011191826.1;Name=WP_011191826.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_011191826.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1631117 1631785 . - . ID=gene1494;Name=DJ40_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07505;old_locus_tag=DJ40_1498 NZ_CP008943.1 Protein Homology CDS 1631117 1631785 . - 0 ID=cds1466;Parent=gene1494;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1631798 1632586 . - . ID=gene1495;Name=DJ40_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07510;old_locus_tag=DJ40_1499 NZ_CP008943.1 Protein Homology CDS 1631798 1632586 . - 0 ID=cds1467;Parent=gene1495;Dbxref=Genbank:WP_011191825.1;Name=WP_011191825.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_011191825.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1632697 1632912 . - . ID=gene1496;Name=DJ40_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07515 NZ_CP008943.1 Protein Homology CDS 1632697 1632912 . - 0 ID=cds1468;Parent=gene1496;Dbxref=Genbank:WP_038400335.1;Name=WP_038400335.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400335.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1632914 1633747 . - . ID=gene1497;Name=DJ40_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07520;old_locus_tag=DJ40_1500 NZ_CP008943.1 Protein Homology CDS 1632914 1633747 . - 0 ID=cds1469;Parent=gene1497;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1634057 1634260 . + . ID=gene1498;Name=DJ40_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07525;old_locus_tag=DJ40_1501 NZ_CP008943.1 Protein Homology CDS 1634057 1634260 . + 0 ID=cds1470;Parent=gene1498;Dbxref=Genbank:WP_038400336.1;Name=WP_038400336.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400336.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1634257 1635654 . + . ID=gene1499;Name=DJ40_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07530;old_locus_tag=DJ40_1502 NZ_CP008943.1 Protein Homology CDS 1634257 1635654 . + 0 ID=cds1471;Parent=gene1499;Dbxref=Genbank:WP_038400338.1;Name=WP_038400338.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_038400338.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1635732 1636118 . + . ID=gene1500;Name=DJ40_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07535;old_locus_tag=DJ40_1503 NZ_CP008943.1 Protein Homology CDS 1635732 1636118 . + 0 ID=cds1472;Parent=gene1500;Dbxref=Genbank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002264506.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1636352 1637551 . + . ID=gene1501;Name=DJ40_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07540;old_locus_tag=DJ40_1504 NZ_CP008943.1 Protein Homology CDS 1636352 1637551 . + 0 ID=cds1473;Parent=gene1501;Dbxref=Genbank:WP_002208741.1;Name=WP_002208741.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002208741.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1637711 1638484 . + . ID=gene1502;Name=DJ40_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07545;old_locus_tag=DJ40_1505 NZ_CP008943.1 Protein Homology CDS 1637711 1638484 . + 0 ID=cds1474;Parent=gene1502;Dbxref=Genbank:WP_011191820.1;Name=WP_011191820.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191820.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1638481 1638822 . + . ID=gene1503;Name=DJ40_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07550;old_locus_tag=DJ40_1506 NZ_CP008943.1 Protein Homology CDS 1638481 1638822 . + 0 ID=cds1475;Parent=gene1503;Dbxref=Genbank:WP_011191819.1;Name=WP_011191819.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011191819.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1638994 1639506 . + . ID=gene1504;Name=DJ40_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07555;old_locus_tag=DJ40_1507 NZ_CP008943.1 Protein Homology CDS 1638994 1639506 . + 0 ID=cds1476;Parent=gene1504;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1639890 1641062 . + . ID=gene1505;Name=DJ40_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07560;old_locus_tag=DJ40_1508 NZ_CP008943.1 Protein Homology CDS 1639890 1641062 . + 0 ID=cds1477;Parent=gene1505;Dbxref=Genbank:WP_002208745.1;Name=WP_002208745.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein A;protein_id=WP_002208745.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1641101 1642636 . + . ID=gene1506;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=DJ40_RS07565;old_locus_tag=DJ40_1509 NZ_CP008943.1 Protein Homology CDS 1641101 1642636 . + 0 ID=cds1478;Parent=gene1506;Dbxref=Genbank:WP_002208746.1;Name=WP_002208746.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1642789 1643955 . - . ID=gene1507;Name=DJ40_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07570;old_locus_tag=DJ40_1510 NZ_CP008943.1 Protein Homology CDS 1642789 1643955 . - 0 ID=cds1479;Parent=gene1507;Dbxref=Genbank:WP_002208747.1;Name=WP_002208747.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208747.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1644207 1644644 . + . ID=gene1508;Name=DJ40_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07575;old_locus_tag=DJ40_1511 NZ_CP008943.1 Protein Homology CDS 1644207 1644644 . + 0 ID=cds1480;Parent=gene1508;Dbxref=Genbank:WP_002216643.1;Name=WP_002216643.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002216643.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1644814 1645563 . + . ID=gene1509;Name=DJ40_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07580;old_locus_tag=DJ40_1512 NZ_CP008943.1 Protein Homology CDS 1644814 1645563 . + 0 ID=cds1481;Parent=gene1509;Dbxref=Genbank:WP_002208749.1;Name=WP_002208749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208749.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1645606 1648248 . + . ID=gene1510;Name=DJ40_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07585;old_locus_tag=DJ40_1513 NZ_CP008943.1 Protein Homology CDS 1645606 1648248 . + 0 ID=cds1482;Parent=gene1510;Dbxref=Genbank:WP_002223249.1;Name=WP_002223249.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=protein lysine acetyltransferase;protein_id=WP_002223249.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1648424 1649779 . + . ID=gene1511;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=DJ40_RS07590;old_locus_tag=DJ40_1514 NZ_CP008943.1 Protein Homology CDS 1648424 1649779 . + 0 ID=cds1483;Parent=gene1511;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1649841 1650182 . + . ID=gene1512;Name=DJ40_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07595;old_locus_tag=DJ40_1515 NZ_CP008943.1 Protein Homology CDS 1649841 1650182 . + 0 ID=cds1484;Parent=gene1512;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1650348 1656013 . + . ID=id80;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1650438 1650553 . - . ID=gene1513;Name=DJ40_RS07600;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS07600;old_locus_tag=DJ40_1516 NZ_CP008943.1 cmsearch rRNA 1650438 1650553 . - . ID=rna23;Parent=gene1513;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 1650438 1650553 . - . ID=id81;Parent=rna23;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq gene 1650646 1653581 . - . ID=gene1514;Name=DJ40_RS07605;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS07605;old_locus_tag=DJ40_1517 NZ_CP008943.1 RefSeq rRNA 1650646 1653581 . - . ID=rna24;Parent=gene1514;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq exon 1650646 1653581 . - . ID=id82;Parent=rna24;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq gene 1653824 1653899 . - . ID=gene1515;Name=DJ40_RS07610;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS07610;old_locus_tag=DJ40_1518 NZ_CP008943.1 tRNAscan-SE tRNA 1653824 1653899 . - . ID=rna25;Parent=gene1515;anticodon=(pos:complement(1653863..1653865));gbkey=tRNA;product=tRNA-Glu NZ_CP008943.1 tRNAscan-SE exon 1653824 1653899 . - . ID=id83;Parent=rna25;anticodon=(pos:complement(1653863..1653865));gbkey=tRNA;product=tRNA-Glu NZ_CP008943.1 RefSeq gene 1654033 1655581 . - . ID=gene1516;Name=DJ40_RS07615;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS07615;old_locus_tag=DJ40_1519 NZ_CP008943.1 RefSeq rRNA 1654033 1655581 . - . ID=rna26;Parent=gene1516;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq exon 1654033 1655581 . - . ID=id84;Parent=rna26;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq gene 1656095 1658668 . - . ID=gene1517;Name=DJ40_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07625;old_locus_tag=DJ40_1520 NZ_CP008943.1 Protein Homology CDS 1656095 1658668 . - 0 ID=cds1485;Parent=gene1517;Dbxref=Genbank:WP_002217405.1;Name=WP_002217405.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_002217405.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1658798 1659529 . - . ID=gene1518;Name=DJ40_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07630;old_locus_tag=DJ40_1521 NZ_CP008943.1 Protein Homology CDS 1658798 1659529 . - 0 ID=cds1486;Parent=gene1518;Dbxref=Genbank:WP_011191814.1;Name=WP_011191814.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191814.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1659531 1660508 . - . ID=gene1519;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=DJ40_RS07635;old_locus_tag=DJ40_1522 NZ_CP008943.1 Protein Homology CDS 1659531 1660508 . - 0 ID=cds1487;Parent=gene1519;Dbxref=Genbank:WP_002231132.1;Name=WP_002231132.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridine synthase D;protein_id=WP_002231132.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1660644 1661375 . + . ID=gene1520;Name=DJ40_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07640;old_locus_tag=DJ40_1523 NZ_CP008943.1 Protein Homology CDS 1660644 1661375 . + 0 ID=cds1488;Parent=gene1520;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1661730 1662092 . + . ID=gene1521;Name=DJ40_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07645;old_locus_tag=DJ40_1524 NZ_CP008943.1 Protein Homology CDS 1661730 1662092 . + 0 ID=cds1489;Parent=gene1521;Dbxref=Genbank:WP_002209468.1;Name=WP_002209468.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_002209468.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1662454 1663611 . + . ID=gene1522;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=DJ40_RS07650;old_locus_tag=DJ40_1525 NZ_CP008943.1 Protein Homology CDS 1662454 1663611 . + 0 ID=cds1490;Parent=gene1522;Dbxref=Genbank:WP_002228330.1;Name=WP_002228330.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_002228330.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1663716 1664837 . - . ID=gene1523;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=DJ40_RS07655;old_locus_tag=DJ40_1526 NZ_CP008943.1 Protein Homology CDS 1663716 1664837 . - 0 ID=cds1491;Parent=gene1523;Dbxref=Genbank:WP_038400343.1;Name=WP_038400343.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_038400343.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1664850 1665920 . - . ID=gene1524;Name=DJ40_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07660;old_locus_tag=DJ40_1527 NZ_CP008943.1 Protein Homology CDS 1664850 1665920 . - 0 ID=cds1492;Parent=gene1524;Dbxref=Genbank:WP_002228238.1;Name=WP_002228238.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002228238.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1666153 1666869 . + . ID=gene1525;Name=DJ40_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07665;old_locus_tag=DJ40_1528 NZ_CP008943.1 Protein Homology CDS 1666153 1666869 . + 0 ID=cds1493;Parent=gene1525;Dbxref=Genbank:WP_002223245.1;Name=WP_002223245.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002223245.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1667302 1668645 . + . ID=gene1526;Name=DJ40_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07670;old_locus_tag=DJ40_1529 NZ_CP008943.1 Protein Homology CDS 1667302 1668645 . + 0 ID=cds1494;Parent=gene1526;Dbxref=Genbank:WP_038400345.1;Name=WP_038400345.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_038400345.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1668968 1669735 . + . ID=gene1527;Name=DJ40_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07675;old_locus_tag=DJ40_1530 NZ_CP008943.1 Protein Homology CDS 1668968 1669735 . + 0 ID=cds1495;Parent=gene1527;Dbxref=Genbank:WP_033851583.1;Name=WP_033851583.1;gbkey=CDS;product=membrane protein;protein_id=WP_033851583.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1669998 1670345 . - . ID=gene1528;Name=DJ40_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07680;old_locus_tag=DJ40_1531 NZ_CP008943.1 Protein Homology CDS 1669998 1670345 . - 0 ID=cds1496;Parent=gene1528;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1670426 1671166 . - . ID=gene1529;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=DJ40_RS07685;old_locus_tag=DJ40_1532 NZ_CP008943.1 Protein Homology CDS 1670426 1671166 . - 0 ID=cds1497;Parent=gene1529;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1671205 1671753 . - . ID=gene1530;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=DJ40_RS07690;old_locus_tag=DJ40_1533 NZ_CP008943.1 Protein Homology CDS 1671205 1671753 . - 0 ID=cds1498;Parent=gene1530;Dbxref=Genbank:WP_002209459.1;Name=WP_002209459.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_002209459.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1671775 1672023 . - . ID=gene1531;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=DJ40_RS07695;old_locus_tag=DJ40_1534 NZ_CP008943.1 Protein Homology CDS 1671775 1672023 . - 0 ID=cds1499;Parent=gene1531;Dbxref=Genbank:WP_002209458.1;Name=WP_002209458.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1672251 1673612 . - . ID=gene1532;Name=DJ40_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07700;old_locus_tag=DJ40_1535 NZ_CP008943.1 Protein Homology CDS 1672251 1673612 . - 0 ID=cds1500;Parent=gene1532;Dbxref=Genbank:WP_011191811.1;Name=WP_011191811.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_011191811.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1673778 1674569 . + . ID=gene1533;Name=DJ40_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07705;old_locus_tag=DJ40_1536 NZ_CP008943.1 Protein Homology CDS 1673778 1674569 . + 0 ID=cds1501;Parent=gene1533;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1674638 1675921 . + . ID=gene1534;Name=DJ40_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07710;old_locus_tag=DJ40_1537 NZ_CP008943.1 Protein Homology CDS 1674638 1675921 . + 0 ID=cds1502;Parent=gene1534;Dbxref=Genbank:WP_038400348.1;Name=WP_038400348.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400348.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1676010 1676525 . - . ID=gene1535;Name=DJ40_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07715;old_locus_tag=DJ40_1538 NZ_CP008943.1 Protein Homology CDS 1676010 1676525 . - 0 ID=cds1503;Parent=gene1535;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1676693 1678252 . - . ID=gene1536;Name=DJ40_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07720;old_locus_tag=DJ40_1539 NZ_CP008943.1 Protein Homology CDS 1676693 1678252 . - 0 ID=cds1504;Parent=gene1536;Dbxref=Genbank:WP_011191809.1;Name=WP_011191809.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_011191809.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1678335 1678763 . - . ID=gene1537;Name=DJ40_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07725;old_locus_tag=DJ40_1540 NZ_CP008943.1 Protein Homology CDS 1678335 1678763 . - 0 ID=cds1505;Parent=gene1537;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1678760 1679326 . - . ID=gene1538;Name=DJ40_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07730;old_locus_tag=DJ40_1541 NZ_CP008943.1 Protein Homology CDS 1678760 1679326 . - 0 ID=cds1506;Parent=gene1538;Dbxref=Genbank:WP_002209450.1;Name=WP_002209450.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1679658 1680035 . + . ID=id85;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1679796 1679872 . - . ID=gene1539;Name=DJ40_RS07735;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS07735;old_locus_tag=DJ40_1543 NZ_CP008943.1 tRNAscan-SE tRNA 1679796 1679872 . - . ID=rna27;Parent=gene1539;anticodon=(pos:complement(1679836..1679838));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 tRNAscan-SE exon 1679796 1679872 . - . ID=id86;Parent=rna27;anticodon=(pos:complement(1679836..1679838));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 RefSeq gene 1679956 1680032 . - . ID=gene1540;Name=DJ40_RS07740;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS07740;old_locus_tag=DJ40_1544 NZ_CP008943.1 tRNAscan-SE tRNA 1679956 1680032 . - . ID=rna28;Parent=gene1540;anticodon=(pos:complement(1679996..1679998));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 tRNAscan-SE exon 1679956 1680032 . - . ID=id87;Parent=rna28;anticodon=(pos:complement(1679996..1679998));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 RefSeq gene 1680090 1680166 . - . ID=gene1541;Name=DJ40_RS07745;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS07745;old_locus_tag=DJ40_1545 NZ_CP008943.1 tRNAscan-SE tRNA 1680090 1680166 . - . ID=rna29;Parent=gene1541;anticodon=(pos:complement(1680130..1680132));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 tRNAscan-SE exon 1680090 1680166 . - . ID=id88;Parent=rna29;anticodon=(pos:complement(1680130..1680132));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 RefSeq gene 1680175 1680267 . - . ID=gene1542;Name=DJ40_RS07750;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS07750;old_locus_tag=DJ40_1546 NZ_CP008943.1 tRNAscan-SE tRNA 1680175 1680267 . - . ID=rna30;Parent=gene1542;anticodon=(pos:complement(1680231..1680233));gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 tRNAscan-SE exon 1680175 1680267 . - . ID=id89;Parent=rna30;anticodon=(pos:complement(1680231..1680233));gbkey=tRNA;product=tRNA-Ser NZ_CP008943.1 RefSeq gene 1680630 1680815 . - . ID=gene1543;Name=DJ40_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07755;old_locus_tag=DJ40_1547 NZ_CP008943.1 Protein Homology CDS 1680630 1680815 . - 0 ID=cds1507;Parent=gene1543;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1681065 1683692 . - . ID=gene1544;Name=DJ40_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07760;old_locus_tag=DJ40_1548 NZ_CP008943.1 Protein Homology CDS 1681065 1683692 . - 0 ID=cds1508;Parent=gene1544;Dbxref=Genbank:WP_012105619.1;Name=WP_012105619.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_012105619.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1683832 1684380 . - . ID=gene1545;Name=DJ40_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07765;old_locus_tag=DJ40_1549 NZ_CP008943.1 Protein Homology CDS 1683832 1684380 . - 0 ID=cds1509;Parent=gene1545;Dbxref=Genbank:WP_032466124.1;Name=WP_032466124.1;gbkey=CDS;product=recombinase RecX;protein_id=WP_032466124.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1684398 1684940 . + . ID=id90;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1685012 1686082 . - . ID=gene1546;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=DJ40_RS07770;old_locus_tag=DJ40_1550 NZ_CP008943.1 Protein Homology CDS 1685012 1686082 . - 0 ID=cds1510;Parent=gene1546;Dbxref=Genbank:WP_002209446.1;Name=WP_002209446.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_002209446.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1686197 1686685 . - . ID=gene1547;Name=DJ40_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07775;old_locus_tag=DJ40_1551 NZ_CP008943.1 Protein Homology CDS 1686197 1686685 . - 0 ID=cds1511;Parent=gene1547;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1687002 1688342 . + . ID=gene1548;Name=DJ40_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07780;old_locus_tag=DJ40_1552 NZ_CP008943.1 Protein Homology CDS 1687002 1688342 . + 0 ID=cds1512;Parent=gene1548;Dbxref=Genbank:WP_002209444.1;Name=WP_002209444.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1688590 1689534 . + . ID=gene1549;Name=DJ40_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07785;old_locus_tag=DJ40_1553 NZ_CP008943.1 Protein Homology CDS 1688590 1689534 . + 0 ID=cds1513;Parent=gene1549;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1689526 1689669 . - . ID=gene1550;Name=DJ40_RS21875;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS21875 NZ_CP008943.1 RefSeq gene 1689756 1691180 . - . ID=gene1551;Name=DJ40_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07790;old_locus_tag=DJ40_1554 NZ_CP008943.1 Protein Homology CDS 1689756 1691180 . - 0 ID=cds1514;Parent=gene1551;Dbxref=Genbank:WP_032466123.1;Name=WP_032466123.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_032466123.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1691201 1692688 . - . ID=gene1552;Name=DJ40_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07795;old_locus_tag=DJ40_1555 NZ_CP008943.1 Protein Homology CDS 1691201 1692688 . - 0 ID=cds1515;Parent=gene1552;Dbxref=Genbank:WP_038400353.1;Name=WP_038400353.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_038400353.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1692691 1693635 . - . ID=gene1553;Name=DJ40_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07800;old_locus_tag=DJ40_1556 NZ_CP008943.1 Protein Homology CDS 1692691 1693635 . - 0 ID=cds1516;Parent=gene1553;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1693628 1694458 . - . ID=gene1554;Name=DJ40_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07805;old_locus_tag=DJ40_1557 NZ_CP008943.1 Protein Homology CDS 1693628 1694458 . - 0 ID=cds1517;Parent=gene1554;Dbxref=Genbank:WP_032466121.1;Name=WP_032466121.1;gbkey=CDS;product=transketolase;protein_id=WP_032466121.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1694697 1695839 . - . ID=gene1555;Name=DJ40_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07810;old_locus_tag=DJ40_1558 NZ_CP008943.1 Protein Homology CDS 1694697 1695839 . - 0 ID=cds1518;Parent=gene1555;Dbxref=Genbank:WP_002354764.1;Name=WP_002354764.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002354764.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1695839 1697362 . - . ID=gene1556;Name=DJ40_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07815;old_locus_tag=DJ40_1559 NZ_CP008943.1 Protein Homology CDS 1695839 1697362 . - 0 ID=cds1519;Parent=gene1556;Dbxref=Genbank:WP_011191801.1;Name=WP_011191801.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011191801.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1697362 1697979 . - . ID=gene1557;Name=DJ40_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07820;old_locus_tag=DJ40_1560 NZ_CP008943.1 Protein Homology CDS 1697362 1697979 . - 0 ID=cds1520;Parent=gene1557;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1698072 1699013 . - . ID=gene1558;Name=DJ40_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07825;old_locus_tag=DJ40_1561 NZ_CP008943.1 Protein Homology CDS 1698072 1699013 . - 0 ID=cds1521;Parent=gene1558;Dbxref=Genbank:WP_011191800.1;Name=WP_011191800.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011191800.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1699549 1701762 . + . ID=gene1559;Name=DJ40_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07830;old_locus_tag=DJ40_1562 NZ_CP008943.1 Protein Homology CDS 1699549 1701762 . + 0 ID=cds1522;Parent=gene1559;Dbxref=Genbank:WP_002209433.1;Name=WP_002209433.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_002209433.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1701839 1702222 . + . ID=gene1560;Name=DJ40_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07835;old_locus_tag=DJ40_1563 NZ_CP008943.1 Protein Homology CDS 1701839 1702222 . + 0 ID=cds1523;Parent=gene1560;Dbxref=Genbank:WP_011191799.1;Name=WP_011191799.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_011191799.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1702370 1702900 . + . ID=gene1561;Name=DJ40_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07840;old_locus_tag=DJ40_1564 NZ_CP008943.1 Protein Homology CDS 1702370 1702900 . + 0 ID=cds1524;Parent=gene1561;Dbxref=Genbank:WP_011191798.1;Name=WP_011191798.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome b561;protein_id=WP_011191798.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1703158 1703868 . - . ID=gene1562;Name=DJ40_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07845;old_locus_tag=DJ40_1565 NZ_CP008943.1 Protein Homology CDS 1703158 1703868 . - 0 ID=cds1525;Parent=gene1562;Dbxref=Genbank:WP_038400356.1;Name=WP_038400356.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_038400356.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1704028 1704888 . - . ID=gene1563;Name=DJ40_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07850;old_locus_tag=DJ40_1566 NZ_CP008943.1 Protein Homology CDS 1704028 1704888 . - 0 ID=cds1526;Parent=gene1563;Dbxref=Genbank:WP_011191796.1;Name=WP_011191796.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_011191796.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1704890 1705507 . - . ID=gene1564;Name=DJ40_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07855;old_locus_tag=DJ40_1567 NZ_CP008943.1 Protein Homology CDS 1704890 1705507 . - 0 ID=cds1527;Parent=gene1564;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1705519 1707969 . - . ID=gene1565;Name=DJ40_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07860;old_locus_tag=DJ40_1568 NZ_CP008943.1 Protein Homology CDS 1705519 1707969 . - 0 ID=cds1528;Parent=gene1565;Dbxref=Genbank:WP_024063669.1;Name=WP_024063669.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_024063669.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1708244 1708962 . + . ID=id91;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1708983 1709678 . - . ID=gene1566;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=DJ40_RS07865;old_locus_tag=DJ40_1569 NZ_CP008943.1 Protein Homology CDS 1708983 1709678 . - 0 ID=cds1529;Parent=gene1566;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1710381 1711190 . + . ID=gene1567;Name=DJ40_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07870;old_locus_tag=DJ40_1570 NZ_CP008943.1 Protein Homology CDS 1710381 1711190 . + 0 ID=cds1530;Parent=gene1567;Dbxref=Genbank:WP_002231122.1;Name=WP_002231122.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002231122.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1711351 1712355 . + . ID=gene1568;Name=DJ40_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07875;old_locus_tag=DJ40_1571 NZ_CP008943.1 Protein Homology CDS 1711351 1712355 . + 0 ID=cds1531;Parent=gene1568;Dbxref=Genbank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002216011.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1712504 1714018 . + . ID=gene1569;Name=DJ40_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07880;old_locus_tag=DJ40_1572 NZ_CP008943.1 Protein Homology CDS 1712504 1714018 . + 0 ID=cds1532;Parent=gene1569;Dbxref=Genbank:WP_038400358.1;Name=WP_038400358.1;gbkey=CDS;product=lipase;protein_id=WP_038400358.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1714011 1715000 . + . ID=gene1570;Name=DJ40_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07885;old_locus_tag=DJ40_1573 NZ_CP008943.1 Protein Homology CDS 1714011 1715000 . + 0 ID=cds1533;Parent=gene1570;Dbxref=Genbank:WP_002209421.1;Name=WP_002209421.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209421.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1715013 1716050 . + . ID=gene1571;Name=DJ40_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07890;old_locus_tag=DJ40_1574 NZ_CP008943.1 Protein Homology CDS 1715013 1716050 . + 0 ID=cds1534;Parent=gene1571;Dbxref=Genbank:WP_002216010.1;Name=WP_002216010.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002216010.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1716292 1717173 . + . ID=gene1572;Name=DJ40_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07895;old_locus_tag=DJ40_1575 NZ_CP008943.1 Protein Homology CDS 1716292 1717173 . + 0 ID=cds1535;Parent=gene1572;Dbxref=Genbank:WP_012413496.1;Name=WP_012413496.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_012413496.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1717184 1718680 . + . ID=gene1573;Name=DJ40_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07900;old_locus_tag=DJ40_1576 NZ_CP008943.1 Protein Homology CDS 1717184 1718680 . + 0 ID=cds1536;Parent=gene1573;Dbxref=Genbank:WP_038400361.1;Name=WP_038400361.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_038400361.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1719078 1720721 . + . ID=gene1574;Name=DJ40_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07905;old_locus_tag=DJ40_1577 NZ_CP008943.1 Protein Homology CDS 1719078 1720721 . + 0 ID=cds1537;Parent=gene1574;Dbxref=Genbank:WP_002209418.1;Name=WP_002209418.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_002209418.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1720904 1721155 . + . ID=gene1575;Name=DJ40_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07910;old_locus_tag=DJ40_1578 NZ_CP008943.1 Protein Homology CDS 1720904 1721155 . + 0 ID=cds1538;Parent=gene1575;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1721152 1721937 . + . ID=gene1576;Name=DJ40_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07915;old_locus_tag=DJ40_1579 NZ_CP008943.1 Protein Homology CDS 1721152 1721937 . + 0 ID=cds1539;Parent=gene1576;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1721947 1722150 . - . ID=gene1577;Name=DJ40_RS07920;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS07920 NZ_CP008943.1 RefSeq gene 1722313 1723500 . - . ID=gene1578;Name=DJ40_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07925;old_locus_tag=DJ40_1580 NZ_CP008943.1 Protein Homology CDS 1722313 1723500 . - 0 ID=cds1540;Parent=gene1578;Dbxref=Genbank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002209414.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1723933 1726029 . - . ID=gene1579;Name=DJ40_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07930;old_locus_tag=DJ40_1581 NZ_CP008943.1 Protein Homology CDS 1723933 1726029 . - 0 ID=cds1541;Parent=gene1579;Dbxref=Genbank:WP_038400364.1;Name=WP_038400364.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_038400364.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1726202 1726453 . + . ID=gene1580;Name=DJ40_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07935;old_locus_tag=DJ40_1582 NZ_CP008943.1 Protein Homology CDS 1726202 1726453 . + 0 ID=cds1542;Parent=gene1580;Dbxref=Genbank:WP_038400365.1;Name=WP_038400365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400365.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1726690 1728069 . + . ID=gene1581;Name=DJ40_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07940;old_locus_tag=DJ40_1583 NZ_CP008943.1 Protein Homology CDS 1726690 1728069 . + 0 ID=cds1543;Parent=gene1581;Dbxref=Genbank:WP_011191786.1;Name=WP_011191786.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_011191786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1728140 1728904 . + . ID=gene1582;Name=DJ40_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07945;old_locus_tag=DJ40_1584 NZ_CP008943.1 Protein Homology CDS 1728140 1728904 . + 0 ID=cds1544;Parent=gene1582;Dbxref=Genbank:WP_038400367.1;Name=WP_038400367.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_038400367.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1729328 1729531 . + . ID=gene1583;Name=DJ40_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07950;old_locus_tag=DJ40_1585 NZ_CP008943.1 Protein Homology CDS 1729328 1729531 . + 0 ID=cds1545;Parent=gene1583;Dbxref=Genbank:WP_038400369.1;Name=WP_038400369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400369.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1729742 1730005 . + . ID=gene1584;Name=DJ40_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07955;old_locus_tag=DJ40_1586 NZ_CP008943.1 Protein Homology CDS 1729742 1730005 . + 0 ID=cds1546;Parent=gene1584;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1730268 1730609 . + . ID=gene1585;Name=DJ40_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07960;old_locus_tag=DJ40_1587 NZ_CP008943.1 Protein Homology CDS 1730268 1730609 . + 0 ID=cds1547;Parent=gene1585;Dbxref=Genbank:WP_012304554.1;Name=WP_012304554.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_012304554.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1730694 1731983 . + . ID=gene1586;Name=DJ40_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07965;old_locus_tag=DJ40_1588 NZ_CP008943.1 Protein Homology CDS 1730694 1731983 . + 0 ID=cds1548;Parent=gene1586;Dbxref=Genbank:WP_012304555.1;Name=WP_012304555.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_012304555.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1732538 1733509 . + . ID=gene1587;Name=DJ40_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07970;old_locus_tag=DJ40_1589 NZ_CP008943.1 Protein Homology CDS 1732538 1733509 . + 0 ID=cds1549;Parent=gene1587;Dbxref=Genbank:WP_002209407.1;Name=WP_002209407.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1733630 1734304 . - . ID=gene1588;Name=DJ40_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07975;old_locus_tag=DJ40_1590 NZ_CP008943.1 Protein Homology CDS 1733630 1734304 . - 0 ID=cds1550;Parent=gene1588;Dbxref=Genbank:WP_012105640.1;Name=WP_012105640.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_012105640.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1734311 1735312 . - . ID=gene1589;Name=DJ40_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07980;old_locus_tag=DJ40_1591 NZ_CP008943.1 Protein Homology CDS 1734311 1735312 . - 0 ID=cds1551;Parent=gene1589;Dbxref=Genbank:WP_038401625.1;Name=WP_038401625.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_038401625.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1735399 1736169 . - . ID=gene1590;Name=DJ40_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07985;old_locus_tag=DJ40_1592 NZ_CP008943.1 Protein Homology CDS 1735399 1736169 . - 0 ID=cds1552;Parent=gene1590;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1736233 1737348 . - . ID=gene1591;Name=DJ40_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07990;old_locus_tag=DJ40_1593 NZ_CP008943.1 Protein Homology CDS 1736233 1737348 . - 0 ID=cds1553;Parent=gene1591;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1737831 1738286 . + . ID=gene1592;Name=DJ40_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS07995;old_locus_tag=DJ40_1594 NZ_CP008943.1 Protein Homology CDS 1737831 1738286 . + 0 ID=cds1554;Parent=gene1592;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1738460 1738594 . - . ID=gene1593;Name=DJ40_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08000 NZ_CP008943.1 Protein Homology CDS 1738460 1738594 . - 0 ID=cds1555;Parent=gene1593;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1739129 1741684 . + . ID=gene1594;Name=DJ40_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08005;old_locus_tag=DJ40_1595 NZ_CP008943.1 Protein Homology CDS 1739129 1741684 . + 0 ID=cds1556;Parent=gene1594;Dbxref=Genbank:WP_038400371.1;Name=WP_038400371.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_038400371.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1742081 1743079 . - . ID=gene1595;Name=DJ40_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08010;old_locus_tag=DJ40_1596 NZ_CP008943.1 Protein Homology CDS 1742081 1743079 . - 0 ID=cds1557;Parent=gene1595;Dbxref=Genbank:WP_038400373.1;Name=WP_038400373.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_038400373.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1743134 1744117 . - . ID=gene1596;Name=DJ40_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08015;old_locus_tag=DJ40_1597 NZ_CP008943.1 Protein Homology CDS 1743134 1744117 . - 0 ID=cds1558;Parent=gene1596;Dbxref=Genbank:WP_012304557.1;Name=WP_012304557.1;gbkey=CDS;product=lipoprotein NlpD;protein_id=WP_012304557.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1744239 1744865 . - . ID=gene1597;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=DJ40_RS08020;old_locus_tag=DJ40_1598 NZ_CP008943.1 Protein Homology CDS 1744239 1744865 . - 0 ID=cds1559;Parent=gene1597;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1744859 1745623 . - . ID=gene1598;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=DJ40_RS08025;old_locus_tag=DJ40_1599 NZ_CP008943.1 Protein Homology CDS 1744859 1745623 . - 0 ID=cds1560;Parent=gene1598;Dbxref=Genbank:WP_011191778.1;Name=WP_011191778.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_011191778.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1745601 1746650 . - . ID=gene1599;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=DJ40_RS08030;old_locus_tag=DJ40_1600 NZ_CP008943.1 Protein Homology CDS 1745601 1746650 . - 0 ID=cds1561;Parent=gene1599;Dbxref=Genbank:WP_011191777.1;Name=WP_011191777.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_011191777.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1746661 1747149 . - . ID=gene1600;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=DJ40_RS08035;old_locus_tag=DJ40_1601 NZ_CP008943.1 Protein Homology CDS 1746661 1747149 . - 0 ID=cds1562;Parent=gene1600;Dbxref=Genbank:WP_002209392.1;Name=WP_002209392.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1747288 1748013 . - . ID=gene1601;Name=DJ40_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08040;old_locus_tag=DJ40_1602 NZ_CP008943.1 Protein Homology CDS 1747288 1748013 . - 0 ID=cds1563;Parent=gene1601;Dbxref=Genbank:WP_038400374.1;Name=WP_038400374.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_038400374.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1748017 1748337 . - . ID=gene1602;Name=DJ40_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08045;old_locus_tag=DJ40_1603 NZ_CP008943.1 Protein Homology CDS 1748017 1748337 . - 0 ID=cds1564;Parent=gene1602;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1748654 1748971 . - . ID=gene1603;Name=DJ40_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08050;old_locus_tag=DJ40_1604 NZ_CP008943.1 Protein Homology CDS 1748654 1748971 . - 0 ID=cds1565;Parent=gene1603;Dbxref=Genbank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209389.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1749162 1749803 . - . ID=gene1604;Name=DJ40_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08055;old_locus_tag=DJ40_1605 NZ_CP008943.1 Protein Homology CDS 1749162 1749803 . - 0 ID=cds1566;Parent=gene1604;Dbxref=Genbank:WP_002209388.1;Name=WP_002209388.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1749805 1751241 . - . ID=gene1605;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=DJ40_RS08060;old_locus_tag=DJ40_1606 NZ_CP008943.1 Protein Homology CDS 1749805 1751241 . - 0 ID=cds1567;Parent=gene1605;Dbxref=Genbank:WP_002228227.1;Name=WP_002228227.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_002228227.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1751334 1752242 . - . ID=gene1606;Name=DJ40_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08065;old_locus_tag=DJ40_1607 NZ_CP008943.1 Protein Homology CDS 1751334 1752242 . - 0 ID=cds1568;Parent=gene1606;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1752253 1753671 . - . ID=gene1607;Name=DJ40_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08070;old_locus_tag=DJ40_1608 NZ_CP008943.1 Protein Homology CDS 1752253 1753671 . - 0 ID=cds1569;Parent=gene1607;Dbxref=Genbank:WP_011191775.1;Name=WP_011191775.1;gbkey=CDS;product=siroheme synthase 1;protein_id=WP_011191775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1753973 1754170 . - . ID=gene1608;Name=DJ40_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08075 NZ_CP008943.1 Protein Homology CDS 1753973 1754170 . - 0 ID=cds1570;Parent=gene1608;Dbxref=Genbank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;product=membrane protein;protein_id=WP_002222261.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1754263 1754463 . + . ID=gene1609;Name=DJ40_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08080;old_locus_tag=DJ40_1609 NZ_CP008943.1 Protein Homology CDS 1754263 1754463 . + 0 ID=cds1571;Parent=gene1609;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1754638 1755045 . + . ID=gene1610;Name=DJ40_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08085;old_locus_tag=DJ40_1610 NZ_CP008943.1 Protein Homology CDS 1754638 1755045 . + 0 ID=cds1572;Parent=gene1610;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1755052 1755768 . + . ID=id92;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1755162 1755620 . - . ID=gene1611;Name=DJ40_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08090;old_locus_tag=DJ40_1611 NZ_CP008943.1 Protein Homology CDS 1755162 1755620 . - 0 ID=cds1573;Parent=gene1611;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1755814 1756548 . - . ID=gene1612;Name=DJ40_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08095;old_locus_tag=DJ40_1612 NZ_CP008943.1 Protein Homology CDS 1755814 1756548 . - 0 ID=cds1574;Parent=gene1612;Dbxref=Genbank:WP_011191774.1;Name=WP_011191774.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_011191774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1756545 1758275 . - . ID=gene1613;Name=DJ40_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08100;old_locus_tag=DJ40_1613 NZ_CP008943.1 Protein Homology CDS 1756545 1758275 . - 0 ID=cds1575;Parent=gene1613;Dbxref=Genbank:WP_012105646.1;Name=WP_012105646.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_012105646.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1758275 1760131 . - . ID=gene1614;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=DJ40_RS08105;old_locus_tag=DJ40_1614 NZ_CP008943.1 Protein Homology CDS 1758275 1760131 . - 0 ID=cds1576;Parent=gene1614;Dbxref=Genbank:WP_032466113.1;Name=WP_032466113.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_032466113.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1760524 1760883 . + . ID=gene1615;Name=DJ40_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08110;old_locus_tag=DJ40_1615 NZ_CP008943.1 Protein Homology CDS 1760524 1760883 . + 0 ID=cds1577;Parent=gene1615;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1761117 1761788 . - . ID=gene1616;Name=DJ40_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08115;old_locus_tag=DJ40_1616 NZ_CP008943.1 Protein Homology CDS 1761117 1761788 . - 0 ID=cds1578;Parent=gene1616;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1761892 1762497 . - . ID=gene1617;Name=DJ40_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08120;old_locus_tag=DJ40_1617 NZ_CP008943.1 Protein Homology CDS 1761892 1762497 . - 0 ID=cds1579;Parent=gene1617;Dbxref=Genbank:WP_038400377.1;Name=WP_038400377.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_038400377.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1762869 1764164 . - . ID=gene1618;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=DJ40_RS08125;old_locus_tag=DJ40_1618 NZ_CP008943.1 Protein Homology CDS 1762869 1764164 . - 0 ID=cds1580;Parent=gene1618;Dbxref=Genbank:WP_038400379.1;Name=WP_038400379.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_038400379.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1764245 1765882 . - . ID=gene1619;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=DJ40_RS08130;old_locus_tag=DJ40_1619 NZ_CP008943.1 Protein Homology CDS 1764245 1765882 . - 0 ID=cds1581;Parent=gene1619;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1766094 1766936 . - . ID=gene1620;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=DJ40_RS08135;old_locus_tag=DJ40_1620 NZ_CP008943.1 Protein Homology CDS 1766094 1766936 . - 0 ID=cds1582;Parent=gene1620;Dbxref=Genbank:WP_011191769.1;Name=WP_011191769.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_011191769.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1766933 1767106 . - . ID=gene1621;Name=DJ40_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08140 NZ_CP008943.1 Protein Homology CDS 1766933 1767106 . - 0 ID=cds1583;Parent=gene1621;Dbxref=Genbank:WP_032466112.1;Name=WP_032466112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466112.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1767156 1769390 . - . ID=gene1622;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=DJ40_RS08145;old_locus_tag=DJ40_1621 NZ_CP008943.1 Protein Homology CDS 1767156 1769390 . - 0 ID=cds1584;Parent=gene1622;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1769834 1772653 . + . ID=gene1623;Name=DJ40_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08150;old_locus_tag=DJ40_1622 NZ_CP008943.1 Protein Homology CDS 1769834 1772653 . + 0 ID=cds1585;Parent=gene1623;Dbxref=Genbank:WP_038400382.1;Name=WP_038400382.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=histidine kinase;protein_id=WP_038400382.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1772812 1774257 . - . ID=gene1624;Name=DJ40_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08155;old_locus_tag=DJ40_1623 NZ_CP008943.1 Protein Homology CDS 1772812 1774257 . - 0 ID=cds1586;Parent=gene1624;Dbxref=Genbank:WP_012105650.1;Name=WP_012105650.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_012105650.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1774455 1775975 . - . ID=gene1625;Name=DJ40_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08160;old_locus_tag=DJ40_1624 NZ_CP008943.1 Protein Homology CDS 1774455 1775975 . - 0 ID=cds1587;Parent=gene1625;Dbxref=Genbank:WP_011191765.1;Name=WP_011191765.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_011191765.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1776286 1776987 . + . ID=gene1626;Name=DJ40_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08165;old_locus_tag=DJ40_1625 NZ_CP008943.1 Protein Homology CDS 1776286 1776987 . + 0 ID=cds1588;Parent=gene1626;Dbxref=Genbank:WP_011191764.1;Name=WP_011191764.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_011191764.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1776987 1777829 . + . ID=gene1627;Name=DJ40_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08170;old_locus_tag=DJ40_1626 NZ_CP008943.1 Protein Homology CDS 1776987 1777829 . + 0 ID=cds1589;Parent=gene1627;Dbxref=Genbank:WP_011191763.1;Name=WP_011191763.1;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_011191763.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1777829 1778443 . + . ID=gene1628;Name=DJ40_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08175;old_locus_tag=DJ40_1627 NZ_CP008943.1 Protein Homology CDS 1777829 1778443 . + 0 ID=cds1590;Parent=gene1628;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1778728 1779072 . - . ID=gene1629;Name=DJ40_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08180;old_locus_tag=DJ40_1628 NZ_CP008943.1 Protein Homology CDS 1778728 1779072 . - 0 ID=cds1591;Parent=gene1629;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1779208 1780644 . - . ID=gene1630;Name=DJ40_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08185;old_locus_tag=DJ40_1629 NZ_CP008943.1 Protein Homology CDS 1779208 1780644 . - 0 ID=cds1592;Parent=gene1630;Dbxref=Genbank:WP_002209364.1;Name=WP_002209364.1;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_002209364.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1781025 1782305 . + . ID=gene1631;Name=DJ40_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08190;old_locus_tag=DJ40_1630 NZ_CP008943.1 Protein Homology CDS 1781025 1782305 . + 0 ID=cds1593;Parent=gene1631;Dbxref=Genbank:WP_011191761.1;Name=WP_011191761.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_011191761.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1782679 1784676 . - . ID=gene1632;Name=DJ40_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08195;old_locus_tag=DJ40_1631 NZ_CP008943.1 Protein Homology CDS 1782679 1784676 . - 0 ID=cds1594;Parent=gene1632;Dbxref=Genbank:WP_038400384.1;Name=WP_038400384.1;gbkey=CDS;product=iron ABC transporter;protein_id=WP_038400384.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1784673 1785584 . - . ID=gene1633;Name=DJ40_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08200;old_locus_tag=DJ40_1632 NZ_CP008943.1 Protein Homology CDS 1784673 1785584 . - 0 ID=cds1595;Parent=gene1633;Dbxref=Genbank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_002209360.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1785578 1785823 . + . ID=gene1634;Name=DJ40_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08205 NZ_CP008943.1 Protein Homology CDS 1785578 1785823 . + 0 ID=cds1596;Parent=gene1634;Dbxref=Genbank:WP_038400386.1;Name=WP_038400386.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400386.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1785779 1786573 . - . ID=gene1635;Name=DJ40_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08210;old_locus_tag=DJ40_1633 NZ_CP008943.1 Protein Homology CDS 1785779 1786573 . - 0 ID=cds1597;Parent=gene1635;Dbxref=Genbank:WP_002209359.1;Name=WP_002209359.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_002209359.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1786895 1789375 . - . ID=gene1636;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=DJ40_RS08215;old_locus_tag=DJ40_1634 NZ_CP008943.1 Protein Homology CDS 1786895 1789375 . - 0 ID=cds1598;Parent=gene1636;Dbxref=Genbank:WP_038400388.1;Name=WP_038400388.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_038400388.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1789484 1792045 . - . ID=gene1637;Name=DJ40_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08220;old_locus_tag=DJ40_1635 NZ_CP008943.1 Protein Homology CDS 1789484 1792045 . - 0 ID=cds1599;Parent=gene1637;Dbxref=Genbank:WP_038401628.1;Name=WP_038401628.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=ATP-dependent helicase HrpB;protein_id=WP_038401628.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1792128 1792703 . + . ID=gene1638;Name=DJ40_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08225;old_locus_tag=DJ40_1636 NZ_CP008943.1 Protein Homology CDS 1792128 1792703 . + 0 ID=cds1600;Parent=gene1638;Dbxref=Genbank:WP_011191757.1;Name=WP_011191757.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_011191757.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1792837 1793574 . + . ID=gene1639;Name=DJ40_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08230;old_locus_tag=DJ40_1637 NZ_CP008943.1 Protein Homology CDS 1792837 1793574 . + 0 ID=cds1601;Parent=gene1639;Dbxref=Genbank:WP_002228221.1;Name=WP_002228221.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_002228221.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1793744 1794199 . + . ID=gene1640;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=DJ40_RS08235;old_locus_tag=DJ40_1638 NZ_CP008943.1 Protein Homology CDS 1793744 1794199 . + 0 ID=cds1602;Parent=gene1640;Dbxref=Genbank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_002209354.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1794479 1795474 . + . ID=gene1641;Name=DJ40_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08240;old_locus_tag=DJ40_1639 NZ_CP008943.1 Protein Homology CDS 1794479 1795474 . + 0 ID=cds1603;Parent=gene1641;Dbxref=Genbank:WP_024063343.1;Name=WP_024063343.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_024063343.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1795617 1797038 . + . ID=gene1642;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=DJ40_RS08245;old_locus_tag=DJ40_1640 NZ_CP008943.1 Protein Homology CDS 1795617 1797038 . + 0 ID=cds1604;Parent=gene1642;Dbxref=Genbank:WP_032465644.1;Name=WP_032465644.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_032465644.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1797046 1797525 . + . ID=gene1643;Name=DJ40_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08250;old_locus_tag=DJ40_1641 NZ_CP008943.1 Protein Homology CDS 1797046 1797525 . + 0 ID=cds1605;Parent=gene1643;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1797794 1798591 . + . ID=gene1644;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=DJ40_RS08255;old_locus_tag=DJ40_1642 NZ_CP008943.1 Protein Homology CDS 1797794 1798591 . + 0 ID=cds1606;Parent=gene1644;Dbxref=Genbank:WP_038400391.1;Name=WP_038400391.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_038400391.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1798679 1799533 . + . ID=gene1645;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=DJ40_RS08260;old_locus_tag=DJ40_1643 NZ_CP008943.1 Protein Homology CDS 1798679 1799533 . + 0 ID=cds1607;Parent=gene1645;Dbxref=Genbank:WP_011191752.1;Name=WP_011191752.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_011191752.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1799944 1800324 . + . ID=gene1646;Name=DJ40_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08265;old_locus_tag=DJ40_1644 NZ_CP008943.1 Protein Homology CDS 1799944 1800324 . + 0 ID=cds1608;Parent=gene1646;Dbxref=Genbank:WP_011191751.1;Name=WP_011191751.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_011191751.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1800473 1801786 . - . ID=gene1647;Name=DJ40_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08270;old_locus_tag=DJ40_1645 NZ_CP008943.1 Protein Homology CDS 1800473 1801786 . - 0 ID=cds1609;Parent=gene1647;Dbxref=Genbank:WP_012304572.1;Name=WP_012304572.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304572.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1801988 1802758 . - . ID=gene1648;Name=DJ40_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08275;old_locus_tag=DJ40_1646 NZ_CP008943.1 Protein Homology CDS 1801988 1802758 . - 0 ID=cds1610;Parent=gene1648;Dbxref=Genbank:WP_012105661.1;Name=WP_012105661.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105661.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1802755 1803681 . - . ID=gene1649;Name=DJ40_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08280;old_locus_tag=DJ40_1647 NZ_CP008943.1 Protein Homology CDS 1802755 1803681 . - 0 ID=cds1611;Parent=gene1649;Dbxref=Genbank:WP_011191749.1;Name=WP_011191749.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_011191749.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1803917 1804579 . + . ID=gene1650;Name=DJ40_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08285;old_locus_tag=DJ40_1648 NZ_CP008943.1 Protein Homology CDS 1803917 1804579 . + 0 ID=cds1612;Parent=gene1650;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1804905 1805441 . - . ID=gene1651;Name=DJ40_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08290;old_locus_tag=DJ40_1649 NZ_CP008943.1 Protein Homology CDS 1804905 1805441 . - 0 ID=cds1613;Parent=gene1651;Dbxref=Genbank:WP_011191748.1;Name=WP_011191748.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_011191748.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1805661 1807262 . - . ID=gene1652;Name=DJ40_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08295;old_locus_tag=DJ40_1650 NZ_CP008943.1 Protein Homology CDS 1805661 1807262 . - 0 ID=cds1614;Parent=gene1652;Dbxref=Genbank:WP_011191747.1;Name=WP_011191747.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=multicopper oxidase;protein_id=WP_011191747.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1807587 1807934 . + . ID=gene1653;Name=DJ40_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08300;old_locus_tag=DJ40_1651 NZ_CP008943.1 Protein Homology CDS 1807587 1807934 . + 0 ID=cds1615;Parent=gene1653;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1808051 1808941 . + . ID=gene1654;Name=DJ40_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08305;old_locus_tag=DJ40_1652 NZ_CP008943.1 Protein Homology CDS 1808051 1808941 . + 0 ID=cds1616;Parent=gene1654;Dbxref=Genbank:WP_038400394.1;Name=WP_038400394.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_038400394.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1809019 1809813 . + . ID=gene1655;Name=DJ40_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08310;old_locus_tag=DJ40_1653 NZ_CP008943.1 Protein Homology CDS 1809019 1809813 . + 0 ID=cds1617;Parent=gene1655;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1810251 1811138 . + . ID=gene1656;Name=DJ40_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08315;old_locus_tag=DJ40_1654 NZ_CP008943.1 Protein Homology CDS 1810251 1811138 . + 0 ID=cds1618;Parent=gene1656;Dbxref=Genbank:WP_011191744.1;Name=WP_011191744.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_011191744.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1811263 1811622 . - . ID=gene1657;Name=DJ40_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08320;old_locus_tag=DJ40_1655 NZ_CP008943.1 Protein Homology CDS 1811263 1811622 . - 0 ID=cds1619;Parent=gene1657;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1811940 1814537 . - . ID=gene1658;Name=DJ40_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08325;old_locus_tag=DJ40_1656 NZ_CP008943.1 Protein Homology CDS 1811940 1814537 . - 0 ID=cds1620;Parent=gene1658;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1815097 1816521 . - . ID=gene1659;Name=DJ40_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08330;old_locus_tag=DJ40_1657 NZ_CP008943.1 Protein Homology CDS 1815097 1816521 . - 0 ID=cds1621;Parent=gene1659;Dbxref=Genbank:WP_002209332.1;Name=WP_002209332.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1816827 1818401 . - . ID=gene1660;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=DJ40_RS08335;old_locus_tag=DJ40_1658 NZ_CP008943.1 Protein Homology CDS 1816827 1818401 . - 0 ID=cds1622;Parent=gene1660;Dbxref=Genbank:WP_011191743.1;Name=WP_011191743.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_011191743.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1818415 1821078 . - . ID=gene1661;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=DJ40_RS08340;old_locus_tag=DJ40_1659 NZ_CP008943.1 Protein Homology CDS 1818415 1821078 . - 0 ID=cds1623;Parent=gene1661;Dbxref=Genbank:WP_012105668.1;Name=WP_012105668.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_012105668.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1821274 1822038 . - . ID=gene1662;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=DJ40_RS08345;old_locus_tag=DJ40_1660 NZ_CP008943.1 Protein Homology CDS 1821274 1822038 . - 0 ID=cds1624;Parent=gene1662;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1822901 1824298 . + . ID=gene1663;Name=DJ40_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08350;old_locus_tag=DJ40_1661 NZ_CP008943.1 Protein Homology CDS 1822901 1824298 . + 0 ID=cds1625;Parent=gene1663;Dbxref=Genbank:WP_012105670.1;Name=WP_012105670.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_012105670.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1824716 1825570 . - . ID=gene1664;Name=DJ40_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08355;old_locus_tag=DJ40_1662 NZ_CP008943.1 Protein Homology CDS 1824716 1825570 . - 0 ID=cds1626;Parent=gene1664;Dbxref=Genbank:WP_002209326.1;Name=WP_002209326.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209326.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1825843 1826394 . - . ID=gene1665;Name=DJ40_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08360;old_locus_tag=DJ40_1663 NZ_CP008943.1 Protein Homology CDS 1825843 1826394 . - 0 ID=cds1627;Parent=gene1665;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1826507 1827415 . + . ID=gene1666;Name=DJ40_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08365;old_locus_tag=DJ40_1664 NZ_CP008943.1 Protein Homology CDS 1826507 1827415 . + 0 ID=cds1628;Parent=gene1666;Dbxref=Genbank:WP_038400397.1;Name=WP_038400397.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_038400397.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1827618 1828082 . + . ID=gene1667;Name=DJ40_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08370;old_locus_tag=DJ40_1665 NZ_CP008943.1 Protein Homology CDS 1827618 1828082 . + 0 ID=cds1629;Parent=gene1667;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1828075 1829613 . + . ID=gene1668;Name=DJ40_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08375;old_locus_tag=DJ40_1666 NZ_CP008943.1 Protein Homology CDS 1828075 1829613 . + 0 ID=cds1630;Parent=gene1668;Dbxref=Genbank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;product=transporter HofB;protein_id=WP_002216083.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1829610 1830809 . + . ID=gene1669;Name=DJ40_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08380;old_locus_tag=DJ40_1667 NZ_CP008943.1 Protein Homology CDS 1829610 1830809 . + 0 ID=cds1631;Parent=gene1669;Dbxref=Genbank:WP_011191739.1;Name=WP_011191739.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_011191739.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1831224 1832267 . - . ID=gene1670;Name=DJ40_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08385;old_locus_tag=DJ40_1668 NZ_CP008943.1 Protein Homology CDS 1831224 1832267 . - 0 ID=cds1632;Parent=gene1670;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1832353 1832553 . + . ID=gene1671;Name=DJ40_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08390 NZ_CP008943.1 Protein Homology CDS 1832353 1832553 . + 0 ID=cds1633;Parent=gene1671;Dbxref=Genbank:WP_038401630.1;Name=WP_038401630.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401630.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1832563 1833183 . + . ID=gene1672;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=DJ40_RS08395;old_locus_tag=DJ40_1669 NZ_CP008943.1 Protein Homology CDS 1832563 1833183 . + 0 ID=cds1634;Parent=gene1672;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1833180 1833932 . + . ID=gene1673;Name=DJ40_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08400;old_locus_tag=DJ40_1670 NZ_CP008943.1 Protein Homology CDS 1833180 1833932 . + 0 ID=cds1635;Parent=gene1673;Dbxref=Genbank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1834140 1834346 . + . ID=gene1674;Name=DJ40_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08405;old_locus_tag=DJ40_1671 NZ_CP008943.1 Protein Homology CDS 1834140 1834346 . + 0 ID=cds1636;Parent=gene1674;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1834499 1834885 . - . ID=gene1675;Name=DJ40_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08410;old_locus_tag=DJ40_1672 NZ_CP008943.1 Protein Homology CDS 1834499 1834885 . - 0 ID=cds1637;Parent=gene1675;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1834963 1835137 . + . ID=id93;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1835180 1837894 . - . ID=gene1676;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=DJ40_RS08415;old_locus_tag=DJ40_1673 NZ_CP008943.1 Protein Homology CDS 1835180 1837894 . - 0 ID=cds1638;Parent=gene1676;Dbxref=Genbank:WP_002210426.1;Name=WP_002210426.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1837972 1838505 . - . ID=gene1677;Name=DJ40_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08420;old_locus_tag=DJ40_1674 NZ_CP008943.1 Protein Homology CDS 1837972 1838505 . - 0 ID=cds1639;Parent=gene1677;Dbxref=Genbank:WP_038400401.1;Name=WP_038400401.1;gbkey=CDS;product=Secretion monitor;protein_id=WP_038400401.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1838534 1839058 . + . ID=gene1678;Name=DJ40_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08425;old_locus_tag=DJ40_1675 NZ_CP008943.1 Protein Homology CDS 1838534 1839058 . + 0 ID=cds1640;Parent=gene1678;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1839240 1840160 . - . ID=gene1679;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=DJ40_RS08430;old_locus_tag=DJ40_1676 NZ_CP008943.1 Protein Homology CDS 1839240 1840160 . - 0 ID=cds1641;Parent=gene1679;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1840260 1841411 . - . ID=gene1680;Name=DJ40_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08435;old_locus_tag=DJ40_1677 NZ_CP008943.1 Protein Homology CDS 1840260 1841411 . - 0 ID=cds1642;Parent=gene1680;Dbxref=Genbank:WP_002210430.1;Name=WP_002210430.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1841484 1842740 . - . ID=gene1681;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=DJ40_RS08440;old_locus_tag=DJ40_1678 NZ_CP008943.1 Protein Homology CDS 1841484 1842740 . - 0 ID=cds1643;Parent=gene1681;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1842767 1843594 . - . ID=gene1682;Name=DJ40_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08445;old_locus_tag=DJ40_1679 NZ_CP008943.1 Protein Homology CDS 1842767 1843594 . - 0 ID=cds1644;Parent=gene1682;Dbxref=Genbank:WP_011191736.1;Name=WP_011191736.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_011191736.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1843596 1844516 . - . ID=gene1683;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=DJ40_RS08450;old_locus_tag=DJ40_1680 NZ_CP008943.1 Protein Homology CDS 1843596 1844516 . - 0 ID=cds1645;Parent=gene1683;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1844509 1845984 . - . ID=gene1684;Name=DJ40_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08455;old_locus_tag=DJ40_1681 NZ_CP008943.1 Protein Homology CDS 1844509 1845984 . - 0 ID=cds1646;Parent=gene1684;Dbxref=Genbank:WP_038401631.1;Name=WP_038401631.1;gbkey=CDS;product=UDP-N-acetylmuramate--alanine ligase;protein_id=WP_038401631.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1846122 1847192 . - . ID=gene1685;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=DJ40_RS08460;old_locus_tag=DJ40_1682 NZ_CP008943.1 Protein Homology CDS 1846122 1847192 . - 0 ID=cds1647;Parent=gene1685;Dbxref=Genbank:WP_011191735.1;Name=WP_011191735.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_011191735.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1847189 1848391 . - . ID=gene1686;Name=DJ40_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08465;old_locus_tag=DJ40_1683 NZ_CP008943.1 Protein Homology CDS 1847189 1848391 . - 0 ID=cds1648;Parent=gene1686;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1848391 1849707 . - . ID=gene1687;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=DJ40_RS08470;old_locus_tag=DJ40_1684 NZ_CP008943.1 Protein Homology CDS 1848391 1849707 . - 0 ID=cds1649;Parent=gene1687;Dbxref=Genbank:WP_012105672.1;Name=WP_012105672.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_012105672.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1849710 1850792 . - . ID=gene1688;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=DJ40_RS08475;old_locus_tag=DJ40_1685 NZ_CP008943.1 Protein Homology CDS 1849710 1850792 . - 0 ID=cds1650;Parent=gene1688;Dbxref=Genbank:WP_002210437.1;Name=WP_002210437.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_002210437.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1850786 1852162 . - . ID=gene1689;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=DJ40_RS08480;old_locus_tag=DJ40_1686 NZ_CP008943.1 Protein Homology CDS 1850786 1852162 . - 0 ID=cds1651;Parent=gene1689;Dbxref=Genbank:WP_011191733.1;Name=WP_011191733.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_011191733.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1852159 1853646 . - . ID=gene1690;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=DJ40_RS08485;old_locus_tag=DJ40_1687 NZ_CP008943.1 Protein Homology CDS 1852159 1853646 . - 0 ID=cds1652;Parent=gene1690;Dbxref=Genbank:WP_012105673.1;Name=WP_012105673.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_012105673.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1853633 1855396 . - . ID=gene1691;Name=DJ40_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08490;old_locus_tag=DJ40_1688 NZ_CP008943.1 Protein Homology CDS 1853633 1855396 . - 0 ID=cds1653;Parent=gene1691;Dbxref=Genbank:WP_011191731.1;Name=WP_011191731.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_011191731.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1855462 1855779 . - . ID=gene1692;Name=DJ40_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08495;old_locus_tag=DJ40_1689 NZ_CP008943.1 Protein Homology CDS 1855462 1855779 . - 0 ID=cds1654;Parent=gene1692;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1855776 1856738 . - . ID=gene1693;Name=DJ40_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08500;old_locus_tag=DJ40_1690 NZ_CP008943.1 Protein Homology CDS 1855776 1856738 . - 0 ID=cds1655;Parent=gene1693;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1856741 1857199 . - . ID=gene1694;Name=DJ40_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08505;old_locus_tag=DJ40_1691 NZ_CP008943.1 Protein Homology CDS 1856741 1857199 . - 0 ID=cds1656;Parent=gene1694;Dbxref=Genbank:WP_011191730.1;Name=WP_011191730.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_011191730.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1857768 1857941 . + . ID=id94;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1858301 1858741 . + . ID=gene1695;Name=DJ40_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08510;old_locus_tag=DJ40_1692 NZ_CP008943.1 Protein Homology CDS 1858301 1858741 . + 0 ID=cds1657;Parent=gene1695;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1858872 1859882 . - . ID=gene1696;Name=DJ40_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08515;old_locus_tag=DJ40_1693 NZ_CP008943.1 Protein Homology CDS 1858872 1859882 . - 0 ID=cds1658;Parent=gene1696;Dbxref=Genbank:WP_038400405.1;Name=WP_038400405.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038400405.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1859949 1860065 . + . ID=gene1697;Name=DJ40_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08520 NZ_CP008943.1 Protein Homology CDS 1859949 1860065 . + 0 ID=cds1659;Parent=gene1697;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1860350 1860844 . - . ID=gene1698;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=DJ40_RS08525;old_locus_tag=DJ40_1694 NZ_CP008943.1 Protein Homology CDS 1860350 1860844 . - 0 ID=cds1660;Parent=gene1698;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1860847 1862574 . - . ID=gene1699;Name=DJ40_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08530;old_locus_tag=DJ40_1695 NZ_CP008943.1 Protein Homology CDS 1860847 1862574 . - 0 ID=cds1661;Parent=gene1699;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1862893 1863003 . - . ID=gene1700;Name=DJ40_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08535 NZ_CP008943.1 Protein Homology CDS 1862893 1863003 . - 0 ID=cds1662;Parent=gene1700;Dbxref=Genbank:WP_032467132.1;Name=WP_032467132.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032467132.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1863034 1864839 . - . ID=gene1701;Name=DJ40_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08540;old_locus_tag=DJ40_1696 NZ_CP008943.1 Protein Homology CDS 1863034 1864839 . - 0 ID=cds1663;Parent=gene1701;Dbxref=Genbank:WP_038400409.1;Name=WP_038400409.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_038400409.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1864836 1865042 . - . ID=gene1702;Name=DJ40_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08545 NZ_CP008943.1 Protein Homology CDS 1864836 1865042 . - 0 ID=cds1664;Parent=gene1702;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1865429 1866385 . - . ID=gene1703;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=DJ40_RS08550;old_locus_tag=DJ40_1697 NZ_CP008943.1 Protein Homology CDS 1865429 1866385 . - 0 ID=cds1665;Parent=gene1703;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1867063 1867278 . + . ID=gene1704;Name=DJ40_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08555;old_locus_tag=DJ40_1698 NZ_CP008943.1 Protein Homology CDS 1867063 1867278 . + 0 ID=cds1666;Parent=gene1704;Dbxref=Genbank:WP_038400411.1;Name=WP_038400411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400411.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1867601 1869163 . + . ID=gene1705;Name=DJ40_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08560;old_locus_tag=DJ40_1699 NZ_CP008943.1 Protein Homology CDS 1867601 1869163 . + 0 ID=cds1667;Parent=gene1705;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1869166 1870257 . + . ID=gene1706;Name=DJ40_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08565;old_locus_tag=DJ40_1700 NZ_CP008943.1 Protein Homology CDS 1869166 1870257 . + 0 ID=cds1668;Parent=gene1706;Dbxref=Genbank:WP_002210454.1;Name=WP_002210454.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_002210454.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1870259 1871689 . + . ID=gene1707;Name=DJ40_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08570;old_locus_tag=DJ40_1701 NZ_CP008943.1 Protein Homology CDS 1870259 1871689 . + 0 ID=cds1669;Parent=gene1707;Dbxref=Genbank:WP_002210455.1;Name=WP_002210455.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1871704 1872306 . + . ID=gene1708;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=DJ40_RS08575;old_locus_tag=DJ40_1702 NZ_CP008943.1 Protein Homology CDS 1871704 1872306 . + 0 ID=cds1670;Parent=gene1708;Dbxref=Genbank:WP_002210456.1;Name=WP_002210456.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1872547 1873728 . - . ID=gene1709;Name=DJ40_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08580;old_locus_tag=DJ40_1703 NZ_CP008943.1 Protein Homology CDS 1872547 1873728 . - 0 ID=cds1671;Parent=gene1709;Dbxref=Genbank:WP_011191726.1;Name=WP_011191726.1;gbkey=CDS;product=MFS transporter;protein_id=WP_011191726.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1873839 1874012 . - . ID=gene1710;Name=DJ40_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08585 NZ_CP008943.1 Protein Homology CDS 1873839 1874012 . - 0 ID=cds1672;Parent=gene1710;Dbxref=Genbank:WP_038400414.1;Name=WP_038400414.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400414.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1874374 1876035 . + . ID=gene1711;Name=DJ40_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08590;old_locus_tag=DJ40_1704 NZ_CP008943.1 Protein Homology CDS 1874374 1876035 . + 0 ID=cds1673;Parent=gene1711;Dbxref=Genbank:WP_011191725.1;Name=WP_011191725.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191725.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1876126 1876419 . - . ID=gene1712;Name=DJ40_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08595;old_locus_tag=DJ40_1705 NZ_CP008943.1 Protein Homology CDS 1876126 1876419 . - 0 ID=cds1674;Parent=gene1712;Dbxref=Genbank:WP_012304588.1;Name=WP_012304588.1;gbkey=CDS;product=membrane protein;protein_id=WP_012304588.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1876920 1877966 . + . ID=gene1713;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=DJ40_RS08600;old_locus_tag=DJ40_1706 NZ_CP008943.1 Protein Homology CDS 1876920 1877966 . + 0 ID=cds1675;Parent=gene1713;Dbxref=Genbank:WP_032466071.1;Name=WP_032466071.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_032466071.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1877942 1879549 . + . ID=gene1714;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=DJ40_RS08605;old_locus_tag=DJ40_1707 NZ_CP008943.1 Protein Homology CDS 1877942 1879549 . + 0 ID=cds1676;Parent=gene1714;Dbxref=Genbank:WP_016582381.1;Name=WP_016582381.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_016582381.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1879536 1880246 . + . ID=gene1715;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=DJ40_RS08610;old_locus_tag=DJ40_1708 NZ_CP008943.1 Protein Homology CDS 1879536 1880246 . + 0 ID=cds1677;Parent=gene1715;Dbxref=Genbank:WP_002210464.1;Name=WP_002210464.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_002210464.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1880315 1881082 . - . ID=gene1716;Name=DJ40_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08615;old_locus_tag=DJ40_1709 NZ_CP008943.1 Protein Homology CDS 1880315 1881082 . - 0 ID=cds1678;Parent=gene1716;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1881278 1883647 . + . ID=gene1717;Name=DJ40_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08620;old_locus_tag=DJ40_1710 NZ_CP008943.1 Protein Homology CDS 1881278 1883647 . + 0 ID=cds1679;Parent=gene1717;Dbxref=Genbank:WP_002210466.1;Name=WP_002210466.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1884092 1886998 . + . ID=gene1718;Name=DJ40_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08625;old_locus_tag=DJ40_1711 NZ_CP008943.1 Protein Homology CDS 1884092 1886998 . + 0 ID=cds1680;Parent=gene1718;Dbxref=Genbank:WP_011191719.1;Name=WP_011191719.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_011191719.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1887041 1887211 . + . ID=id95;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1887254 1887607 . - . ID=gene1719;Name=DJ40_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08630;old_locus_tag=DJ40_1712 NZ_CP008943.1 Protein Homology CDS 1887254 1887607 . - 0 ID=cds1681;Parent=gene1719;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1887629 1891123 . - . ID=gene1720;Name=DJ40_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08635;old_locus_tag=DJ40_1713 NZ_CP008943.1 Protein Homology CDS 1887629 1891123 . - 0 ID=cds1682;Parent=gene1720;Dbxref=Genbank:WP_012105680.1;Name=WP_012105680.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105680.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1891132 1892763 . - . ID=gene1721;Name=DJ40_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08640;old_locus_tag=DJ40_1714 NZ_CP008943.1 Protein Homology CDS 1891132 1892763 . - 0 ID=cds1683;Parent=gene1721;Dbxref=Genbank:WP_038400418.1;Name=WP_038400418.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400418.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1892760 1894115 . - . ID=gene1722;Name=DJ40_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08645;old_locus_tag=DJ40_1715 NZ_CP008943.1 Protein Homology CDS 1892760 1894115 . - 0 ID=cds1684;Parent=gene1722;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1894235 1894726 . - . ID=gene1723;Name=DJ40_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08650;old_locus_tag=DJ40_1716 NZ_CP008943.1 Protein Homology CDS 1894235 1894726 . - 0 ID=cds1685;Parent=gene1723;Dbxref=Genbank:WP_011191717.1;Name=WP_011191717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191717.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1894719 1895084 . - . ID=gene1724;Name=DJ40_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08655;old_locus_tag=DJ40_1717 NZ_CP008943.1 Protein Homology CDS 1894719 1895084 . - 0 ID=cds1686;Parent=gene1724;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1895090 1895707 . - . ID=gene1725;Name=DJ40_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08660;old_locus_tag=DJ40_1718 NZ_CP008943.1 Protein Homology CDS 1895090 1895707 . - 0 ID=cds1687;Parent=gene1725;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1895700 1896803 . - . ID=gene1726;Name=DJ40_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08665;old_locus_tag=DJ40_1719 NZ_CP008943.1 Protein Homology CDS 1895700 1896803 . - 0 ID=cds1688;Parent=gene1726;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1896829 1899048 . - . ID=gene1727;Name=DJ40_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08670;old_locus_tag=DJ40_1720 NZ_CP008943.1 Protein Homology CDS 1896829 1899048 . - 0 ID=cds1689;Parent=gene1727;Dbxref=Genbank:WP_002224087.1;Name=WP_002224087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224087.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1899061 1901409 . - . ID=gene1728;Name=DJ40_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08675;old_locus_tag=DJ40_1721 NZ_CP008943.1 Protein Homology CDS 1899061 1901409 . - 0 ID=cds1690;Parent=gene1728;Dbxref=Genbank:WP_011191715.1;Name=WP_011191715.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_011191715.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1901513 1904101 . - . ID=gene1729;Name=DJ40_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08680;old_locus_tag=DJ40_1722 NZ_CP008943.1 Protein Homology CDS 1901513 1904101 . - 0 ID=cds1691;Parent=gene1729;Dbxref=Genbank:WP_024063110.1;Name=WP_024063110.1;gbkey=CDS;product=type VI secretion system family protein;protein_id=WP_024063110.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1904119 1905102 . - . ID=gene1730;Name=DJ40_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08685;old_locus_tag=DJ40_1723 NZ_CP008943.1 Protein Homology CDS 1904119 1905102 . - 0 ID=cds1692;Parent=gene1730;Dbxref=Genbank:WP_002210476.1;Name=WP_002210476.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210476.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1905095 1906939 . - . ID=gene1731;Name=DJ40_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08690;old_locus_tag=DJ40_1724 NZ_CP008943.1 Protein Homology CDS 1905095 1906939 . - 0 ID=cds1693;Parent=gene1731;Dbxref=Genbank:WP_011191714.1;Name=WP_011191714.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_011191714.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1906972 1907415 . - . ID=gene1732;Name=DJ40_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08695;old_locus_tag=DJ40_1725 NZ_CP008943.1 Protein Homology CDS 1906972 1907415 . - 0 ID=cds1694;Parent=gene1732;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1907489 1908007 . - . ID=gene1733;Name=DJ40_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08700;old_locus_tag=DJ40_1726 NZ_CP008943.1 Protein Homology CDS 1907489 1908007 . - 0 ID=cds1695;Parent=gene1733;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1908170 1909672 . - . ID=gene1734;Name=DJ40_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08705;old_locus_tag=DJ40_1727 NZ_CP008943.1 Protein Homology CDS 1908170 1909672 . - 0 ID=cds1696;Parent=gene1734;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1909681 1910241 . - . ID=gene1735;Name=DJ40_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08710;old_locus_tag=DJ40_1728 NZ_CP008943.1 Protein Homology CDS 1909681 1910241 . - 0 ID=cds1697;Parent=gene1735;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1910252 1911265 . - . ID=gene1736;Name=DJ40_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08715;old_locus_tag=DJ40_1729 NZ_CP008943.1 Protein Homology CDS 1910252 1911265 . - 0 ID=cds1698;Parent=gene1736;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1911595 1912338 . + . ID=gene1737;Name=DJ40_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08720;old_locus_tag=DJ40_1730 NZ_CP008943.1 Protein Homology CDS 1911595 1912338 . + 0 ID=cds1699;Parent=gene1737;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1913561 1914181 . + . ID=gene1738;Name=DJ40_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08725;old_locus_tag=DJ40_1731 NZ_CP008943.1 Protein Homology CDS 1913561 1914181 . + 0 ID=cds1700;Parent=gene1738;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1914498 1915331 . - . ID=gene1739;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=DJ40_RS08730;old_locus_tag=DJ40_1732 NZ_CP008943.1 Protein Homology CDS 1914498 1915331 . - 0 ID=cds1701;Parent=gene1739;Dbxref=Genbank:WP_024063108.1;Name=WP_024063108.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_024063108.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1915516 1917858 . + . ID=gene1740;Name=DJ40_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08735;old_locus_tag=DJ40_1733 NZ_CP008943.1 Protein Homology CDS 1915516 1917858 . + 0 ID=cds1702;Parent=gene1740;Dbxref=Genbank:WP_011191712.1;Name=WP_011191712.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_011191712.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1917926 1919230 . + . ID=gene1741;Name=DJ40_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08740;old_locus_tag=DJ40_1734 NZ_CP008943.1 Protein Homology CDS 1917926 1919230 . + 0 ID=cds1703;Parent=gene1741;Dbxref=Genbank:WP_024063106.1;Name=WP_024063106.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_024063106.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1919214 1920209 . + . ID=gene1742;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=DJ40_RS08745;old_locus_tag=DJ40_1735 NZ_CP008943.1 Protein Homology CDS 1919214 1920209 . + 0 ID=cds1704;Parent=gene1742;Dbxref=Genbank:WP_011191711.1;Name=WP_011191711.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_011191711.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1920202 1921020 . + . ID=gene1743;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=DJ40_RS08750;old_locus_tag=DJ40_1736 NZ_CP008943.1 Protein Homology CDS 1920202 1921020 . + 0 ID=cds1705;Parent=gene1743;Dbxref=Genbank:WP_011191710.1;Name=WP_011191710.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_011191710.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1921034 1921411 . + . ID=gene1744;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=DJ40_RS08755;old_locus_tag=DJ40_1737 NZ_CP008943.1 Protein Homology CDS 1921034 1921411 . + 0 ID=cds1706;Parent=gene1744;Dbxref=Genbank:WP_038400422.1;Name=WP_038400422.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=heavy metal transporter;protein_id=WP_038400422.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1921428 1922297 . + . ID=gene1745;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=DJ40_RS08760;old_locus_tag=DJ40_1738 NZ_CP008943.1 Protein Homology CDS 1921428 1922297 . + 0 ID=cds1707;Parent=gene1745;Dbxref=Genbank:WP_011191708.1;Name=WP_011191708.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_011191708.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1922387 1922851 . - . ID=gene1746;Name=DJ40_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08765;old_locus_tag=DJ40_1739 NZ_CP008943.1 Protein Homology CDS 1922387 1922851 . - 0 ID=cds1708;Parent=gene1746;Dbxref=Genbank:WP_011191707.1;Name=WP_011191707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191707.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1922979 1923199 . - . ID=gene1747;Name=DJ40_RS08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS08770;pseudo=true NZ_CP008943.1 Protein Homology CDS 1922979 1923199 . - 0 ID=cds1709;Parent=gene1747;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1923690 1924172 . - . ID=gene1748;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=DJ40_RS08775;old_locus_tag=DJ40_1740 NZ_CP008943.1 Protein Homology CDS 1923690 1924172 . - 0 ID=cds1710;Parent=gene1748;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1924322 1924786 . - . ID=gene1749;Name=DJ40_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08780;old_locus_tag=DJ40_1741 NZ_CP008943.1 Protein Homology CDS 1924322 1924786 . - 0 ID=cds1711;Parent=gene1749;Dbxref=Genbank:WP_032466075.1;Name=WP_032466075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466075.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1924783 1925583 . - . ID=gene1750;Name=DJ40_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08785;old_locus_tag=DJ40_1742 NZ_CP008943.1 Protein Homology CDS 1924783 1925583 . - 0 ID=cds1712;Parent=gene1750;Dbxref=Genbank:WP_011191704.1;Name=WP_011191704.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191704.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1925898 1926512 . + . ID=gene1751;Name=DJ40_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08790;old_locus_tag=DJ40_1743 NZ_CP008943.1 Protein Homology CDS 1925898 1926512 . + 0 ID=cds1713;Parent=gene1751;Dbxref=Genbank:WP_011191703.1;Name=WP_011191703.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_011191703.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1926738 1929971 . - . ID=gene1752;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=DJ40_RS08795;old_locus_tag=DJ40_1744 NZ_CP008943.1 Protein Homology CDS 1926738 1929971 . - 0 ID=cds1714;Parent=gene1752;Dbxref=Genbank:WP_011191702.1;Name=WP_011191702.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=WP_011191702.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1929987 1931162 . - . ID=gene1753;Name=DJ40_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08800;old_locus_tag=DJ40_1745 NZ_CP008943.1 Protein Homology CDS 1929987 1931162 . - 0 ID=cds1715;Parent=gene1753;Dbxref=Genbank:WP_002224759.1;Name=WP_002224759.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_002224759.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1931635 1932456 . - . ID=gene1754;Name=DJ40_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08805;old_locus_tag=DJ40_1746 NZ_CP008943.1 Protein Homology CDS 1931635 1932456 . - 0 ID=cds1716;Parent=gene1754;Dbxref=Genbank:WP_002210504.1;Name=WP_002210504.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1932844 1933242 . + . ID=id96;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1932963 1933298 . + . ID=gene1755;Name=DJ40_RS08810;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS08810 NZ_CP008943.1 RefSeq gene 1933300 1934253 . - . ID=gene1756;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=DJ40_RS08815;old_locus_tag=DJ40_1747 NZ_CP008943.1 Protein Homology CDS 1933300 1934253 . - 0 ID=cds1717;Parent=gene1756;Dbxref=Genbank:WP_011191701.1;Name=WP_011191701.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011191701.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1934234 1934692 . - . ID=gene1757;Name=DJ40_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08820;old_locus_tag=DJ40_1748 NZ_CP008943.1 Protein Homology CDS 1934234 1934692 . - 0 ID=cds1718;Parent=gene1757;Dbxref=Genbank:WP_002228112.1;Name=WP_002228112.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1934760 1935269 . - . ID=gene1758;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=DJ40_RS08825;old_locus_tag=DJ40_1749 NZ_CP008943.1 Protein Homology CDS 1934760 1935269 . - 0 ID=cds1719;Parent=gene1758;Dbxref=Genbank:WP_002210508.1;Name=WP_002210508.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_002210508.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1935269 1938085 . - . ID=gene1759;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=DJ40_RS08830;old_locus_tag=DJ40_1750 NZ_CP008943.1 Protein Homology CDS 1935269 1938085 . - 0 ID=cds1720;Parent=gene1759;Dbxref=Genbank:WP_038400423.1;Name=WP_038400423.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_038400423.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1938117 1939055 . - . ID=gene1760;Name=DJ40_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08835;old_locus_tag=DJ40_1751 NZ_CP008943.1 Protein Homology CDS 1938117 1939055 . - 0 ID=cds1721;Parent=gene1760;Dbxref=Genbank:WP_012304604.1;Name=WP_012304604.1;gbkey=CDS;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=WP_012304604.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1939272 1939448 . + . ID=gene1761;Name=DJ40_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08840 NZ_CP008943.1 Protein Homology CDS 1939272 1939448 . + 0 ID=cds1722;Parent=gene1761;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1939470 1939733 . + . ID=gene1762;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=DJ40_RS08845;old_locus_tag=DJ40_1752 NZ_CP008943.1 Protein Homology CDS 1939470 1939733 . + 0 ID=cds1723;Parent=gene1762;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1939864 1940763 . - . ID=gene1763;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=DJ40_RS08850;old_locus_tag=DJ40_1753 NZ_CP008943.1 Protein Homology CDS 1939864 1940763 . - 0 ID=cds1724;Parent=gene1763;Dbxref=Genbank:WP_038400424.1;Name=WP_038400424.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_038400424.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1940893 1942077 . - . ID=gene1764;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=DJ40_RS08855;old_locus_tag=DJ40_1754 NZ_CP008943.1 Protein Homology CDS 1940893 1942077 . - 0 ID=cds1725;Parent=gene1764;Dbxref=Genbank:WP_011191700.1;Name=WP_011191700.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_011191700.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1942320 1943459 . - . ID=gene1765;Name=DJ40_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08860;old_locus_tag=DJ40_1755 NZ_CP008943.1 Protein Homology CDS 1942320 1943459 . - 0 ID=cds1726;Parent=gene1765;Dbxref=Genbank:WP_002209249.1;Name=WP_002209249.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1943571 1945481 . - . ID=gene1766;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=DJ40_RS08865;old_locus_tag=DJ40_1756 NZ_CP008943.1 Protein Homology CDS 1943571 1945481 . - 0 ID=cds1727;Parent=gene1766;Dbxref=Genbank:WP_002209248.1;Name=WP_002209248.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1945855 1946466 . + . ID=gene1767;Name=DJ40_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08870;old_locus_tag=DJ40_1757 NZ_CP008943.1 Protein Homology CDS 1945855 1946466 . + 0 ID=cds1728;Parent=gene1767;Dbxref=Genbank:WP_002209246.1;Name=WP_002209246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209246.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1946756 1947025 . + . ID=gene1768;Name=DJ40_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08875 NZ_CP008943.1 GeneMarkS+ CDS 1946756 1947025 . + 0 ID=cds1729;Parent=gene1768;Dbxref=Genbank:WP_038400425.1;Name=WP_038400425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400425.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1947049 1947540 . + . ID=gene1769;Name=DJ40_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08880 NZ_CP008943.1 Protein Homology CDS 1947049 1947540 . + 0 ID=cds1730;Parent=gene1769;Dbxref=Genbank:WP_038400428.1;Name=WP_038400428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400428.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1947683 1949209 . + . ID=gene1770;Name=DJ40_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08885 NZ_CP008943.1 Protein Homology CDS 1947683 1949209 . + 0 ID=cds1731;Parent=gene1770;Dbxref=Genbank:WP_032466616.1;Name=WP_032466616.1;gbkey=CDS;product=GCN5 family acetyltransferase;protein_id=WP_032466616.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1949279 1950667 . - . ID=gene1771;Name=DJ40_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08890;old_locus_tag=DJ40_1761 NZ_CP008943.1 Protein Homology CDS 1949279 1950667 . - 0 ID=cds1732;Parent=gene1771;Dbxref=Genbank:WP_032466079.1;Name=WP_032466079.1;gbkey=CDS;product=MFS transporter;protein_id=WP_032466079.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1950795 1951382 . - . ID=gene1772;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=DJ40_RS08895;old_locus_tag=DJ40_1762 NZ_CP008943.1 Protein Homology CDS 1950795 1951382 . - 0 ID=cds1733;Parent=gene1772;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1951670 1952623 . - . ID=gene1773;Name=DJ40_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08900;old_locus_tag=DJ40_1763 NZ_CP008943.1 Protein Homology CDS 1951670 1952623 . - 0 ID=cds1734;Parent=gene1773;Dbxref=Genbank:WP_002209241.1;Name=WP_002209241.1;gbkey=CDS;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1953155 1953931 . + . ID=gene1774;Name=DJ40_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08905;old_locus_tag=DJ40_1764 NZ_CP008943.1 Protein Homology CDS 1953155 1953931 . + 0 ID=cds1735;Parent=gene1774;Dbxref=Genbank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209240.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1954748 1956037 . - . ID=gene1775;Name=DJ40_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08910;old_locus_tag=DJ40_1766 NZ_CP008943.1 Protein Homology CDS 1954748 1956037 . - 0 ID=cds1736;Parent=gene1775;Dbxref=Genbank:WP_002209239.1;Name=WP_002209239.1;gbkey=CDS;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1956041 1956970 . - . ID=gene1776;Name=DJ40_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08915;old_locus_tag=DJ40_1767 NZ_CP008943.1 Protein Homology CDS 1956041 1956970 . - 0 ID=cds1737;Parent=gene1776;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1956973 1959432 . - . ID=gene1777;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=DJ40_RS08920;old_locus_tag=DJ40_1768 NZ_CP008943.1 Protein Homology CDS 1956973 1959432 . - 0 ID=cds1738;Parent=gene1777;Dbxref=Genbank:WP_002209237.1;Name=WP_002209237.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=WP_002209237.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1960536 1961252 . + . ID=gene1778;Name=DJ40_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08925;old_locus_tag=DJ40_1770 NZ_CP008943.1 Protein Homology CDS 1960536 1961252 . + 0 ID=cds1739;Parent=gene1778;Dbxref=Genbank:WP_038400431.1;Name=WP_038400431.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_038400431.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1961426 1961893 . - . ID=gene1779;Name=DJ40_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08930;old_locus_tag=DJ40_1771 NZ_CP008943.1 Protein Homology CDS 1961426 1961893 . - 0 ID=cds1740;Parent=gene1779;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1962119 1962985 . + . ID=gene1780;Name=DJ40_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08935;old_locus_tag=DJ40_1774 NZ_CP008943.1 Protein Homology CDS 1962119 1962985 . + 0 ID=cds1741;Parent=gene1780;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1962982 1963629 . - . ID=gene1781;Name=DJ40_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08940;old_locus_tag=DJ40_1773 NZ_CP008943.1 Protein Homology CDS 1962982 1963629 . - 0 ID=cds1742;Parent=gene1781;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1963723 1964265 . + . ID=gene1782;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=DJ40_RS08945;old_locus_tag=DJ40_1776 NZ_CP008943.1 Protein Homology CDS 1963723 1964265 . + 0 ID=cds1743;Parent=gene1782;Dbxref=Genbank:WP_011191695.1;Name=WP_011191695.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_011191695.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1964262 1964654 . - . ID=gene1783;Name=DJ40_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08950;old_locus_tag=DJ40_1775 NZ_CP008943.1 Protein Homology CDS 1964262 1964654 . - 0 ID=cds1744;Parent=gene1783;Dbxref=Genbank:WP_002209228.1;Name=WP_002209228.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1964910 1966829 . - . ID=gene1784;Name=DJ40_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08955;old_locus_tag=DJ40_1777 NZ_CP008943.1 Protein Homology CDS 1964910 1966829 . - 0 ID=cds1745;Parent=gene1784;Dbxref=Genbank:WP_002209227.1;Name=WP_002209227.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002209227.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1967399 1970125 . + . ID=gene1785;Name=DJ40_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08960;old_locus_tag=DJ40_1778 NZ_CP008943.1 Protein Homology CDS 1967399 1970125 . + 0 ID=cds1746;Parent=gene1785;Dbxref=Genbank:WP_011191693.1;Name=WP_011191693.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_011191693.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1970500 1971123 . + . ID=gene1786;Name=DJ40_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08965;old_locus_tag=DJ40_1779 NZ_CP008943.1 Protein Homology CDS 1970500 1971123 . + 0 ID=cds1747;Parent=gene1786;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1971120 1972421 . + . ID=gene1787;Name=DJ40_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08970;old_locus_tag=DJ40_1780 NZ_CP008943.1 Protein Homology CDS 1971120 1972421 . + 0 ID=cds1748;Parent=gene1787;Dbxref=Genbank:WP_002209224.1;Name=WP_002209224.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209224.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1972427 1972933 . + . ID=gene1788;Name=DJ40_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08975;old_locus_tag=DJ40_1781 NZ_CP008943.1 Protein Homology CDS 1972427 1972933 . + 0 ID=cds1749;Parent=gene1788;Dbxref=Genbank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215967.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1973116 1974783 . + . ID=gene1789;Name=DJ40_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08980;old_locus_tag=DJ40_1782 NZ_CP008943.1 Protein Homology CDS 1973116 1974783 . + 0 ID=cds1750;Parent=gene1789;Dbxref=Genbank:WP_011191691.1;Name=WP_011191691.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_011191691.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1974929 1976059 . - . ID=gene1790;Name=DJ40_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08985;old_locus_tag=DJ40_1783 NZ_CP008943.1 Protein Homology CDS 1974929 1976059 . - 0 ID=cds1751;Parent=gene1790;Dbxref=Genbank:WP_038401635.1;Name=WP_038401635.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_038401635.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1976216 1977487 . - . ID=gene1791;Name=DJ40_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08990;old_locus_tag=DJ40_1784 NZ_CP008943.1 Protein Homology CDS 1976216 1977487 . - 0 ID=cds1752;Parent=gene1791;Dbxref=Genbank:WP_002209221.1;Name=WP_002209221.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_002209221.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1977646 1979028 . - . ID=gene1792;Name=DJ40_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS08995;old_locus_tag=DJ40_1785 NZ_CP008943.1 Protein Homology CDS 1977646 1979028 . - 0 ID=cds1753;Parent=gene1792;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1979148 1980128 . - . ID=gene1793;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=DJ40_RS09000;old_locus_tag=DJ40_1786 NZ_CP008943.1 Protein Homology CDS 1979148 1980128 . - 0 ID=cds1754;Parent=gene1793;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1980362 1981063 . + . ID=gene1794;Name=DJ40_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09005;old_locus_tag=DJ40_1787 NZ_CP008943.1 Protein Homology CDS 1980362 1981063 . + 0 ID=cds1755;Parent=gene1794;Dbxref=Genbank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;product=protein Smp;protein_id=WP_002209218.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1981175 1981894 . - . ID=gene1795;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=DJ40_RS09010;old_locus_tag=DJ40_1788 NZ_CP008943.1 Protein Homology CDS 1981175 1981894 . - 0 ID=cds1756;Parent=gene1795;Dbxref=Genbank:WP_011191689.1;Name=WP_011191689.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_011191689.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1982019 1983242 . - . ID=gene1796;Name=DJ40_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09015;old_locus_tag=DJ40_1789 NZ_CP008943.1 Protein Homology CDS 1982019 1983242 . - 0 ID=cds1757;Parent=gene1796;Dbxref=Genbank:WP_038400436.1;Name=WP_038400436.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_038400436.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1983374 1984696 . - . ID=gene1797;Name=DJ40_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09020;old_locus_tag=DJ40_1790 NZ_CP008943.1 Protein Homology CDS 1983374 1984696 . - 0 ID=cds1758;Parent=gene1797;Dbxref=Genbank:WP_011191687.1;Name=WP_011191687.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_011191687.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1984814 1985611 . - . ID=gene1798;Name=DJ40_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09025;old_locus_tag=DJ40_1791 NZ_CP008943.1 Protein Homology CDS 1984814 1985611 . - 0 ID=cds1759;Parent=gene1798;Dbxref=Genbank:WP_038400438.1;Name=WP_038400438.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_038400438.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1986232 1987509 . - . ID=gene1799;Name=DJ40_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09030;old_locus_tag=DJ40_1792 NZ_CP008943.1 Protein Homology CDS 1986232 1987509 . - 0 ID=cds1760;Parent=gene1799;Dbxref=Genbank:WP_038401637.1;Name=WP_038401637.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_038401637.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 1987675 1987846 . + . ID=id97;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 1987883 1988179 . + . ID=id98;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 1988168 1988956 . - . ID=gene1800;Name=DJ40_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09035;old_locus_tag=DJ40_1793 NZ_CP008943.1 Protein Homology CDS 1988168 1988956 . - 0 ID=cds1761;Parent=gene1800;Dbxref=Genbank:WP_002228116.1;Name=WP_002228116.1;gbkey=CDS;product=DNAse;protein_id=WP_002228116.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1988993 1990264 . - . ID=gene1801;Name=DJ40_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09040;old_locus_tag=DJ40_1794 NZ_CP008943.1 Protein Homology CDS 1988993 1990264 . - 0 ID=cds1762;Parent=gene1801;Dbxref=Genbank:WP_011191684.1;Name=WP_011191684.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_011191684.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1990338 1990499 . - . ID=gene1802;Name=DJ40_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09045;old_locus_tag=DJ40_1795 NZ_CP008943.1 Protein Homology CDS 1990338 1990499 . - 0 ID=cds1763;Parent=gene1802;Dbxref=Genbank:WP_011191683.1;Name=WP_011191683.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191683.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1990666 1991280 . - . ID=gene1803;Name=DJ40_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09050;old_locus_tag=DJ40_1796 NZ_CP008943.1 Protein Homology CDS 1990666 1991280 . - 0 ID=cds1764;Parent=gene1803;Dbxref=Genbank:WP_011191682.1;Name=WP_011191682.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191682.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1991608 1993197 . - . ID=gene1804;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=DJ40_RS09055;old_locus_tag=DJ40_1797 NZ_CP008943.1 Protein Homology CDS 1991608 1993197 . - 0 ID=cds1765;Parent=gene1804;Dbxref=Genbank:WP_011191681.1;Name=WP_011191681.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_011191681.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1993375 1993818 . - . ID=gene1805;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=DJ40_RS09060;old_locus_tag=DJ40_1798 NZ_CP008943.1 Protein Homology CDS 1993375 1993818 . - 0 ID=cds1766;Parent=gene1805;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1993763 1994200 . - . ID=gene1806;Name=DJ40_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09065;old_locus_tag=DJ40_1799 NZ_CP008943.1 Protein Homology CDS 1993763 1994200 . - 0 ID=cds1767;Parent=gene1806;Dbxref=Genbank:WP_011191680.1;Name=WP_011191680.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_011191680.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1994313 1995355 . + . ID=gene1807;Name=DJ40_RS09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS09070;old_locus_tag=DJ40_1800;pseudo=true NZ_CP008943.1 Protein Homology CDS 1994313 1995355 . + 0 ID=cds1768;Parent=gene1807;exception=annotated by transcript or proteomic data;gbkey=CDS;product=16S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 1995612 1995698 . + . ID=gene1808;Name=DJ40_RS09075;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS09075;old_locus_tag=DJ40_1801 NZ_CP008943.1 tRNAscan-SE tRNA 1995612 1995698 . + . ID=rna31;Parent=gene1808;anticodon=(pos:1995646..1995648);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 1995612 1995698 . + . ID=id99;Parent=rna31;anticodon=(pos:1995646..1995648);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 1995795 1995881 . + . ID=gene1809;Name=DJ40_RS09080;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS09080;old_locus_tag=DJ40_1802 NZ_CP008943.1 tRNAscan-SE tRNA 1995795 1995881 . + . ID=rna32;Parent=gene1809;anticodon=(pos:1995829..1995831);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 1995795 1995881 . + . ID=id100;Parent=rna32;anticodon=(pos:1995829..1995831);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 1995977 1996063 . + . ID=gene1810;Name=DJ40_RS09085;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS09085;old_locus_tag=DJ40_1803 NZ_CP008943.1 tRNAscan-SE tRNA 1995977 1996063 . + . ID=rna33;Parent=gene1810;anticodon=(pos:1996011..1996013);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 1995977 1996063 . + . ID=id101;Parent=rna33;anticodon=(pos:1996011..1996013);gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 1996233 1996565 . - . ID=gene1811;Name=DJ40_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09090;old_locus_tag=DJ40_1804 NZ_CP008943.1 Protein Homology CDS 1996233 1996565 . - 0 ID=cds1769;Parent=gene1811;Dbxref=Genbank:WP_012413464.1;Name=WP_012413464.1;gbkey=CDS;product=membrane protein;protein_id=WP_012413464.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1996814 1997986 . + . ID=gene1812;Name=DJ40_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09095;old_locus_tag=DJ40_1805 NZ_CP008943.1 Protein Homology CDS 1996814 1997986 . + 0 ID=cds1770;Parent=gene1812;Dbxref=Genbank:WP_038400441.1;Name=WP_038400441.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_038400441.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1998545 1999630 . - . ID=gene1813;Name=DJ40_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09100;old_locus_tag=DJ40_1806 NZ_CP008943.1 Protein Homology CDS 1998545 1999630 . - 0 ID=cds1771;Parent=gene1813;Dbxref=Genbank:WP_002209202.1;Name=WP_002209202.1;gbkey=CDS;product=pectinesterase;protein_id=WP_002209202.1;transl_table=11 NZ_CP008943.1 RefSeq gene 1999940 2000263 . + . ID=gene1814;Name=DJ40_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09105 NZ_CP008943.1 Protein Homology CDS 1999940 2000263 . + 0 ID=cds1772;Parent=gene1814;Dbxref=Genbank:WP_042592862.1;Name=WP_042592862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592862.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2000446 2000742 . + . ID=gene1815;Name=DJ40_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09110;old_locus_tag=DJ40_1807 NZ_CP008943.1 Protein Homology CDS 2000446 2000742 . + 0 ID=cds1773;Parent=gene1815;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2000876 2001069 . + . ID=gene1816;Name=DJ40_RS09115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS09115;pseudo=true NZ_CP008943.1 Protein Homology CDS 2000876 2001069 . + 0 ID=cds1774;Parent=gene1816;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2001105 2004191 . - . ID=gene1817;Name=DJ40_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09120;old_locus_tag=DJ40_1808 NZ_CP008943.1 Protein Homology CDS 2001105 2004191 . - 0 ID=cds1775;Parent=gene1817;Dbxref=Genbank:WP_011191676.1;Name=WP_011191676.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_011191676.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2004191 2005273 . - . ID=gene1818;Name=DJ40_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09125;old_locus_tag=DJ40_1809 NZ_CP008943.1 Protein Homology CDS 2004191 2005273 . - 0 ID=cds1776;Parent=gene1818;Dbxref=Genbank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209199.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2005325 2005558 . - . ID=gene1819;Name=DJ40_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09130;old_locus_tag=DJ40_1810 NZ_CP008943.1 Protein Homology CDS 2005325 2005558 . - 0 ID=cds1777;Parent=gene1819;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2006180 2006348 . + . ID=id102;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2006368 2007600 . - . ID=gene1820;Name=DJ40_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09140;old_locus_tag=DJ40_1811 NZ_CP008943.1 Protein Homology CDS 2006368 2007600 . - 0 ID=cds1778;Parent=gene1820;Dbxref=Genbank:WP_002209197.1;Name=WP_002209197.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_002209197.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2007648 2008811 . - . ID=gene1821;Name=DJ40_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09145;old_locus_tag=DJ40_1812 NZ_CP008943.1 Protein Homology CDS 2007648 2008811 . - 0 ID=cds1779;Parent=gene1821;Dbxref=Genbank:WP_038400446.1;Name=WP_038400446.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_038400446.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2009157 2010749 . - . ID=gene1822;Name=DJ40_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09150;old_locus_tag=DJ40_1813 NZ_CP008943.1 Protein Homology CDS 2009157 2010749 . - 0 ID=cds1780;Parent=gene1822;Dbxref=Genbank:WP_002230543.1;Name=WP_002230543.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002230543.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2010920 2011915 . - . ID=gene1823;Name=DJ40_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09155;old_locus_tag=DJ40_1814 NZ_CP008943.1 Protein Homology CDS 2010920 2011915 . - 0 ID=cds1781;Parent=gene1823;Dbxref=Genbank:WP_002230544.1;Name=WP_002230544.1;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002230544.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2011944 2012150 . + . ID=gene1824;Name=DJ40_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09160 NZ_CP008943.1 Protein Homology CDS 2011944 2012150 . + 0 ID=cds1782;Parent=gene1824;Dbxref=Genbank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;product=membrane protein;protein_id=WP_002221620.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2012260 2013843 . + . ID=gene1825;Name=DJ40_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09165;old_locus_tag=DJ40_1815 NZ_CP008943.1 Protein Homology CDS 2012260 2013843 . + 0 ID=cds1783;Parent=gene1825;Dbxref=Genbank:WP_038400448.1;Name=WP_038400448.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_038400448.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2013837 2014892 . + . ID=gene1826;Name=DJ40_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09170;old_locus_tag=DJ40_1816 NZ_CP008943.1 Protein Homology CDS 2013837 2014892 . + 0 ID=cds1784;Parent=gene1826;Dbxref=Genbank:WP_012304623.1;Name=WP_012304623.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_012304623.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2014889 2015890 . + . ID=gene1827;Name=DJ40_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09175;old_locus_tag=DJ40_1817 NZ_CP008943.1 Protein Homology CDS 2014889 2015890 . + 0 ID=cds1785;Parent=gene1827;Dbxref=Genbank:WP_011191663.1;Name=WP_011191663.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_011191663.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2015935 2016954 . + . ID=gene1828;Name=DJ40_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09180;old_locus_tag=DJ40_1818 NZ_CP008943.1 Protein Homology CDS 2015935 2016954 . + 0 ID=cds1786;Parent=gene1828;Dbxref=Genbank:WP_012105717.1;Name=WP_012105717.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_012105717.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2017010 2017885 . + . ID=gene1829;Name=DJ40_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09185;old_locus_tag=DJ40_1819 NZ_CP008943.1 Protein Homology CDS 2017010 2017885 . + 0 ID=cds1787;Parent=gene1829;Dbxref=Genbank:WP_011191661.1;Name=WP_011191661.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_011191661.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2017950 2018240 . + . ID=gene1830;Name=DJ40_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09190;old_locus_tag=DJ40_1820 NZ_CP008943.1 Protein Homology CDS 2017950 2018240 . + 0 ID=cds1788;Parent=gene1830;Dbxref=Genbank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002209186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2018563 2019054 . + . ID=gene1831;Name=DJ40_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09195;old_locus_tag=DJ40_1821 NZ_CP008943.1 Protein Homology CDS 2018563 2019054 . + 0 ID=cds1789;Parent=gene1831;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2019116 2021692 . - . ID=gene1832;Name=DJ40_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09200;old_locus_tag=DJ40_1822 NZ_CP008943.1 Protein Homology CDS 2019116 2021692 . - 0 ID=cds1790;Parent=gene1832;Dbxref=Genbank:WP_038401639.1;Name=WP_038401639.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_038401639.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2022057 2023139 . + . ID=gene1833;Name=DJ40_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09205;old_locus_tag=DJ40_1823 NZ_CP008943.1 Protein Homology CDS 2022057 2023139 . + 0 ID=cds1791;Parent=gene1833;Dbxref=Genbank:WP_011191659.1;Name=WP_011191659.1;gbkey=CDS;product=PTS fructose transporter subunit IIC;protein_id=WP_011191659.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2023199 2023626 . + . ID=id103;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2023659 2023979 . + . ID=gene1834;Name=DJ40_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09210;old_locus_tag=DJ40_1824 NZ_CP008943.1 Protein Homology CDS 2023659 2023979 . + 0 ID=cds1792;Parent=gene1834;Dbxref=Genbank:WP_002209181.1;Name=WP_002209181.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2024072 2024416 . + . ID=gene1835;Name=DJ40_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09215;old_locus_tag=DJ40_1826 NZ_CP008943.1 Protein Homology CDS 2024072 2024416 . + 0 ID=cds1793;Parent=gene1835;Dbxref=Genbank:WP_032466091.1;Name=WP_032466091.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=PTS fructose-like transporter subunit EIIB;protein_id=WP_032466091.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2024409 2025284 . - . ID=gene1836;Name=DJ40_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09220;old_locus_tag=DJ40_1825 NZ_CP008943.1 Protein Homology CDS 2024409 2025284 . - 0 ID=cds1794;Parent=gene1836;Dbxref=Genbank:WP_011191658.1;Name=WP_011191658.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011191658.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2025286 2025822 . - . ID=gene1837;Name=DJ40_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09225;old_locus_tag=DJ40_1827 NZ_CP008943.1 Protein Homology CDS 2025286 2025822 . - 0 ID=cds1795;Parent=gene1837;Dbxref=Genbank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2026528 2027724 . + . ID=gene1838;Name=DJ40_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09230;old_locus_tag=DJ40_1828 NZ_CP008943.1 Protein Homology CDS 2026528 2027724 . + 0 ID=cds1796;Parent=gene1838;Dbxref=Genbank:WP_011191657.1;Name=WP_011191657.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191657.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2027753 2028799 . + . ID=gene1839;Name=DJ40_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09235;old_locus_tag=DJ40_1829 NZ_CP008943.1 Protein Homology CDS 2027753 2028799 . + 0 ID=cds1797;Parent=gene1839;Dbxref=Genbank:WP_002209176.1;Name=WP_002209176.1;gbkey=CDS;product=peptidase M48;protein_id=WP_002209176.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2029142 2031733 . + . ID=gene1840;Name=DJ40_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09240;old_locus_tag=DJ40_1830 NZ_CP008943.1 Protein Homology CDS 2029142 2031733 . + 0 ID=cds1798;Parent=gene1840;Dbxref=Genbank:WP_038400451.1;Name=WP_038400451.1;gbkey=CDS;product=type I restriction-modification protein subunit M;protein_id=WP_038400451.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2031735 2033018 . + . ID=gene1841;Name=DJ40_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09245;old_locus_tag=DJ40_1831 NZ_CP008943.1 Protein Homology CDS 2031735 2033018 . + 0 ID=cds1799;Parent=gene1841;Dbxref=Genbank:WP_032466092.1;Name=WP_032466092.1;gbkey=CDS;product=restriction endonuclease subunit S;protein_id=WP_032466092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2033033 2036260 . + . ID=gene1842;Name=DJ40_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09250;old_locus_tag=DJ40_1832 NZ_CP008943.1 Protein Homology CDS 2033033 2036260 . + 0 ID=cds1800;Parent=gene1842;Dbxref=Genbank:WP_038400453.1;Name=WP_038400453.1;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=WP_038400453.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2036510 2037776 . - . ID=gene1843;Name=DJ40_RS09255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS09255;pseudo=true NZ_CP008943.1 Protein Homology CDS 2036510 2037776 . - 0 ID=cds1801;Parent=gene1843;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_except=(pos:complement(2037297..2037299)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 2038210 2038581 . + . ID=gene1844;Name=DJ40_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09260;old_locus_tag=DJ40_1836 NZ_CP008943.1 Protein Homology CDS 2038210 2038581 . + 0 ID=cds1802;Parent=gene1844;Dbxref=Genbank:WP_038400455.1;Name=WP_038400455.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400455.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2038598 2038786 . - . ID=gene1845;Name=DJ40_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09265;old_locus_tag=DJ40_1837 NZ_CP008943.1 Protein Homology CDS 2038598 2038786 . - 0 ID=cds1803;Parent=gene1845;Dbxref=Genbank:WP_038401641.1;Name=WP_038401641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401641.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2038829 2039466 . + . ID=id104;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2038840 2039178 . - . ID=gene1846;Name=DJ40_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09270 NZ_CP008943.1 Protein Homology CDS 2038840 2039178 . - 0 ID=cds1804;Parent=gene1846;Dbxref=Genbank:WP_038400457.1;Name=WP_038400457.1;gbkey=CDS;product=terminase;protein_id=WP_038400457.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2039156 2039442 . - . ID=gene1847;Name=DJ40_RS09275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS09275;pseudo=true NZ_CP008943.1 Protein Homology CDS 2039156 2039442 . - 0 ID=cds1805;Parent=gene1847;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase small subunit;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2039495 2039968 . - . ID=gene1848;Name=DJ40_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09280;old_locus_tag=DJ40_1839 NZ_CP008943.1 Protein Homology CDS 2039495 2039968 . - 0 ID=cds1806;Parent=gene1848;Dbxref=Genbank:WP_012104463.1;Name=WP_012104463.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104463.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2039982 2040512 . - . ID=gene1849;Name=DJ40_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09285;old_locus_tag=DJ40_1840 NZ_CP008943.1 Protein Homology CDS 2039982 2040512 . - 0 ID=cds1807;Parent=gene1849;Dbxref=Genbank:WP_012104462.1;Name=WP_012104462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104462.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2040521 2041894 . - . ID=gene1850;Name=DJ40_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09290;old_locus_tag=DJ40_1841 NZ_CP008943.1 Protein Homology CDS 2040521 2041894 . - 0 ID=cds1808;Parent=gene1850;Dbxref=Genbank:WP_038400460.1;Name=WP_038400460.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_038400460.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2040867 2041417 . + . ID=id105;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2041425 2045984 . + . ID=id106;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2042441 2045149 . - . ID=gene1851;Name=DJ40_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09295;old_locus_tag=DJ40_1842 NZ_CP008943.1 Protein Homology CDS 2042441 2045149 . - 0 ID=cds1809;Parent=gene1851;Dbxref=Genbank:WP_038400462.1;Name=WP_038400462.1;gbkey=CDS;product=DNA primase;protein_id=WP_038400462.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2045143 2045448 . - . ID=gene1852;Name=DJ40_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09300;old_locus_tag=DJ40_1843 NZ_CP008943.1 Protein Homology CDS 2045143 2045448 . - 0 ID=cds1810;Parent=gene1852;Dbxref=Genbank:WP_038400465.1;Name=WP_038400465.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400465.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2045602 2045796 . - . ID=gene1853;Name=DJ40_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09310;old_locus_tag=DJ40_1845 NZ_CP008943.1 Protein Homology CDS 2045602 2045796 . - 0 ID=cds1811;Parent=gene1853;Dbxref=Genbank:WP_038400469.1;Name=WP_038400469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400469.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2045789 2045971 . - . ID=gene1854;Name=DJ40_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09315 NZ_CP008943.1 Protein Homology CDS 2045789 2045971 . - 0 ID=cds1812;Parent=gene1854;Dbxref=Genbank:WP_038401642.1;Name=WP_038401642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401642.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2046038 2046346 . - . ID=gene1855;Name=DJ40_RS09320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS09320;partial=true;pseudo=true;start_range=.,2046038 NZ_CP008943.1 Protein Homology CDS 2046038 2046346 . - 0 ID=cds1813;Parent=gene1855;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2046038;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2046303 2046725 . + . ID=id107;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2046895 2047905 . - . ID=gene1856;Name=DJ40_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09325;old_locus_tag=DJ40_1847 NZ_CP008943.1 Protein Homology CDS 2046895 2047905 . - 0 ID=cds1814;Parent=gene1856;Dbxref=Genbank:WP_038400470.1;Name=WP_038400470.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400470.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2047920 2048309 . - . ID=gene1857;Name=DJ40_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09330;old_locus_tag=DJ40_1848 NZ_CP008943.1 Protein Homology CDS 2047920 2048309 . - 0 ID=cds1815;Parent=gene1857;Dbxref=Genbank:WP_049862811.1;Name=WP_049862811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862811.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2048339 2048536 . - . ID=gene1858;Name=DJ40_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09335;old_locus_tag=DJ40_1849 NZ_CP008943.1 Protein Homology CDS 2048339 2048536 . - 0 ID=cds1816;Parent=gene1858;Dbxref=Genbank:WP_038400474.1;Name=WP_038400474.1;gbkey=CDS;product=dipicolinate synthase;protein_id=WP_038400474.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2048757 2049212 . - . ID=gene1859;Name=DJ40_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09340;old_locus_tag=DJ40_1850 NZ_CP008943.1 Protein Homology CDS 2048757 2049212 . - 0 ID=cds1817;Parent=gene1859;Dbxref=Genbank:WP_038400476.1;Name=WP_038400476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400476.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2049231 2049560 . - . ID=gene1860;Name=DJ40_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09345;old_locus_tag=DJ40_1851 NZ_CP008943.1 Protein Homology CDS 2049231 2049560 . - 0 ID=cds1818;Parent=gene1860;Dbxref=Genbank:WP_038400478.1;Name=WP_038400478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400478.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2049694 2050962 . - . ID=gene1861;Name=DJ40_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09350;old_locus_tag=DJ40_1852 NZ_CP008943.1 Protein Homology CDS 2049694 2050962 . - 0 ID=cds1819;Parent=gene1861;Dbxref=Genbank:WP_038400480.1;Name=WP_038400480.1;gbkey=CDS;product=integrase;protein_id=WP_038400480.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2051127 2051211 . - . ID=gene1862;Name=DJ40_RS09355;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS09355;old_locus_tag=DJ40_1853 NZ_CP008943.1 tRNAscan-SE tRNA 2051127 2051211 . - . ID=rna34;Parent=gene1862;anticodon=(pos:complement(2051175..2051177));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 2051127 2051211 . - . ID=id108;Parent=rna34;anticodon=(pos:complement(2051175..2051177));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 2051316 2052392 . - . ID=gene1863;Name=DJ40_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09360;old_locus_tag=DJ40_1854 NZ_CP008943.1 Protein Homology CDS 2051316 2052392 . - 0 ID=cds1820;Parent=gene1863;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2052392 2053486 . - . ID=gene1864;Name=DJ40_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09365;old_locus_tag=DJ40_1855 NZ_CP008943.1 Protein Homology CDS 2052392 2053486 . - 0 ID=cds1821;Parent=gene1864;Dbxref=Genbank:WP_002209311.1;Name=WP_002209311.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2053766 2055277 . + . ID=gene1865;Name=DJ40_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09370;old_locus_tag=DJ40_1856 NZ_CP008943.1 Protein Homology CDS 2053766 2055277 . + 0 ID=cds1822;Parent=gene1865;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2055428 2055877 . + . ID=gene1866;Name=DJ40_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09375;old_locus_tag=DJ40_1857 NZ_CP008943.1 Protein Homology CDS 2055428 2055877 . + 0 ID=cds1823;Parent=gene1866;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2055890 2058787 . + . ID=gene1867;Name=DJ40_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09380;old_locus_tag=DJ40_1858 NZ_CP008943.1 Protein Homology CDS 2055890 2058787 . + 0 ID=cds1824;Parent=gene1867;Dbxref=Genbank:WP_011191653.1;Name=WP_011191653.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_011191653.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2058930 2059433 . + . ID=gene1868;Name=DJ40_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09385;old_locus_tag=DJ40_1859 NZ_CP008943.1 Protein Homology CDS 2058930 2059433 . + 0 ID=cds1825;Parent=gene1868;Dbxref=Genbank:WP_011191652.1;Name=WP_011191652.1;gbkey=CDS;product=N-acetyltransferase;protein_id=WP_011191652.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2059485 2059896 . + . ID=id109;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2059940 2060371 . - . ID=gene1869;Name=DJ40_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09390;old_locus_tag=DJ40_1860 NZ_CP008943.1 Protein Homology CDS 2059940 2060371 . - 0 ID=cds1826;Parent=gene1869;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2060582 2061589 . + . ID=gene1870;Name=DJ40_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09395;old_locus_tag=DJ40_1861 NZ_CP008943.1 Protein Homology CDS 2060582 2061589 . + 0 ID=cds1827;Parent=gene1870;Dbxref=Genbank:WP_011191651.1;Name=WP_011191651.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_011191651.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2061852 2062310 . - . ID=gene1871;Name=DJ40_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09400;old_locus_tag=DJ40_1862 NZ_CP008943.1 Protein Homology CDS 2061852 2062310 . - 0 ID=cds1828;Parent=gene1871;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2062350 2062481 . + . ID=id110;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2062584 2062753 . + . ID=id111;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2062949 2064517 . + . ID=gene1872;Name=DJ40_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09405;old_locus_tag=DJ40_1863 NZ_CP008943.1 Protein Homology CDS 2062949 2064517 . + 0 ID=cds1829;Parent=gene1872;Dbxref=Genbank:WP_012105726.1;Name=WP_012105726.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012105726.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2064613 2065662 . + . ID=gene1873;Name=DJ40_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09410;old_locus_tag=DJ40_1864 NZ_CP008943.1 Protein Homology CDS 2064613 2065662 . + 0 ID=cds1830;Parent=gene1873;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2065681 2066517 . + . ID=gene1874;Name=DJ40_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09415;old_locus_tag=DJ40_1865 NZ_CP008943.1 Protein Homology CDS 2065681 2066517 . + 0 ID=cds1831;Parent=gene1874;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2066510 2067388 . + . ID=gene1875;Name=DJ40_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09420;old_locus_tag=DJ40_1866 NZ_CP008943.1 Protein Homology CDS 2066510 2067388 . + 0 ID=cds1832;Parent=gene1875;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2067375 2068091 . + . ID=gene1876;Name=DJ40_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09425;old_locus_tag=DJ40_1867 NZ_CP008943.1 Protein Homology CDS 2067375 2068091 . + 0 ID=cds1833;Parent=gene1876;Dbxref=Genbank:WP_012105727.1;Name=WP_012105727.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_012105727.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2068525 2070663 . + . ID=gene1877;Name=DJ40_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09430;old_locus_tag=DJ40_1868 NZ_CP008943.1 Protein Homology CDS 2068525 2070663 . + 0 ID=cds1834;Parent=gene1877;Dbxref=Genbank:WP_002209296.1;Name=WP_002209296.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2070840 2071304 . + . ID=gene1878;Name=DJ40_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09435 NZ_CP008943.1 Protein Homology CDS 2070840 2071304 . + 0 ID=cds1835;Parent=gene1878;Dbxref=Genbank:WP_032466992.1;Name=WP_032466992.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_032466992.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2071615 2072340 . + . ID=gene1879;Name=DJ40_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09440;old_locus_tag=DJ40_1870 NZ_CP008943.1 Protein Homology CDS 2071615 2072340 . + 0 ID=cds1836;Parent=gene1879;Dbxref=Genbank:WP_011191649.1;Name=WP_011191649.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_011191649.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2072341 2072817 . + . ID=gene1880;Name=DJ40_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09445;old_locus_tag=DJ40_1871 NZ_CP008943.1 Protein Homology CDS 2072341 2072817 . + 0 ID=cds1837;Parent=gene1880;Dbxref=Genbank:WP_038400484.1;Name=WP_038400484.1;gbkey=CDS;product=phosphonate C-P lyase;protein_id=WP_038400484.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2072817 2073443 . + . ID=gene1881;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=DJ40_RS09450;old_locus_tag=DJ40_1872 NZ_CP008943.1 Protein Homology CDS 2072817 2073443 . + 0 ID=cds1838;Parent=gene1881;Dbxref=Genbank:WP_012304642.1;Name=WP_012304642.1;gbkey=CDS;gene=phnH;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_012304642.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2073443 2074624 . + . ID=gene1882;Name=DJ40_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09455;old_locus_tag=DJ40_1873 NZ_CP008943.1 Protein Homology CDS 2073443 2074624 . + 0 ID=cds1839;Parent=gene1882;Dbxref=Genbank:WP_038400486.1;Name=WP_038400486.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_038400486.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2074617 2075498 . + . ID=gene1883;Name=DJ40_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09460;old_locus_tag=DJ40_1874 NZ_CP008943.1 Protein Homology CDS 2074617 2075498 . + 0 ID=cds1840;Parent=gene1883;Dbxref=Genbank:WP_038400488.1;Name=WP_038400488.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_038400488.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2075498 2076289 . + . ID=gene1884;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=DJ40_RS09465;old_locus_tag=DJ40_1875 NZ_CP008943.1 Protein Homology CDS 2075498 2076289 . + 0 ID=cds1841;Parent=gene1884;Dbxref=Genbank:WP_002209288.1;Name=WP_002209288.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_002209288.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2076678 2077397 . + . ID=gene1885;Name=DJ40_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09470;old_locus_tag=DJ40_1876 NZ_CP008943.1 Protein Homology CDS 2076678 2077397 . + 0 ID=cds1842;Parent=gene1885;Dbxref=Genbank:WP_038401647.1;Name=WP_038401647.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_038401647.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2077394 2078530 . + . ID=gene1886;Name=DJ40_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09475;old_locus_tag=DJ40_1877 NZ_CP008943.1 Protein Homology CDS 2077394 2078530 . + 0 ID=cds1843;Parent=gene1886;Dbxref=Genbank:WP_038400490.1;Name=WP_038400490.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_038400490.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2078530 2079111 . + . ID=gene1887;Name=DJ40_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09480;old_locus_tag=DJ40_1878 NZ_CP008943.1 Protein Homology CDS 2078530 2079111 . + 0 ID=cds1844;Parent=gene1887;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2079102 2079854 . + . ID=gene1888;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=DJ40_RS09485;old_locus_tag=DJ40_1879 NZ_CP008943.1 Protein Homology CDS 2079102 2079854 . + 0 ID=cds1845;Parent=gene1888;Dbxref=Genbank:WP_012105735.1;Name=WP_012105735.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_012105735.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2079867 2080505 . - . ID=gene1889;Name=DJ40_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09490;old_locus_tag=DJ40_1880 NZ_CP008943.1 Protein Homology CDS 2079867 2080505 . - 0 ID=cds1846;Parent=gene1889;Dbxref=Genbank:WP_012105736.1;Name=WP_012105736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105736.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2080657 2081100 . - . ID=gene1890;Name=DJ40_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09495;old_locus_tag=DJ40_1881 NZ_CP008943.1 Protein Homology CDS 2080657 2081100 . - 0 ID=cds1847;Parent=gene1890;Dbxref=Genbank:WP_038400493.1;Name=WP_038400493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400493.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2081214 2082380 . - . ID=gene1891;Name=DJ40_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09500;old_locus_tag=DJ40_1882 NZ_CP008943.1 Protein Homology CDS 2081214 2082380 . - 0 ID=cds1848;Parent=gene1891;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2082395 2083489 . - . ID=gene1892;Name=DJ40_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09505;old_locus_tag=DJ40_1883 NZ_CP008943.1 Protein Homology CDS 2082395 2083489 . - 0 ID=cds1849;Parent=gene1892;Dbxref=Genbank:WP_012105737.1;Name=WP_012105737.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105737.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2083501 2084340 . - . ID=gene1893;Name=DJ40_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09510;old_locus_tag=DJ40_1884 NZ_CP008943.1 Protein Homology CDS 2083501 2084340 . - 0 ID=cds1850;Parent=gene1893;Dbxref=Genbank:WP_038400495.1;Name=WP_038400495.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038400495.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2084359 2085243 . - . ID=gene1894;Name=DJ40_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09515;old_locus_tag=DJ40_1885 NZ_CP008943.1 Protein Homology CDS 2084359 2085243 . - 0 ID=cds1851;Parent=gene1894;Dbxref=Genbank:WP_011191641.1;Name=WP_011191641.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_011191641.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2085251 2086565 . - . ID=gene1895;Name=DJ40_RS09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS09520;pseudo=true NZ_CP008943.1 Protein Homology CDS 2085251 2086565 . - 0 ID=cds1852;Parent=gene1895;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2087126 2088349 . + . ID=gene1896;Name=DJ40_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09525;old_locus_tag=DJ40_1888 NZ_CP008943.1 Protein Homology CDS 2087126 2088349 . + 0 ID=cds1853;Parent=gene1896;Dbxref=Genbank:WP_002209276.1;Name=WP_002209276.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209276.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2088373 2090391 . + . ID=gene1897;Name=DJ40_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09530;old_locus_tag=DJ40_1889 NZ_CP008943.1 Protein Homology CDS 2088373 2090391 . + 0 ID=cds1854;Parent=gene1897;Dbxref=Genbank:WP_012304650.1;Name=WP_012304650.1;gbkey=CDS;product=alginate lyase;protein_id=WP_012304650.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2090619 2090906 . + . ID=gene1898;Name=DJ40_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09535;old_locus_tag=DJ40_1890 NZ_CP008943.1 Protein Homology CDS 2090619 2090906 . + 0 ID=cds1855;Parent=gene1898;Dbxref=Genbank:WP_038400498.1;Name=WP_038400498.1;gbkey=CDS;product=nuclease;protein_id=WP_038400498.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2090873 2091003 . + . ID=id112;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2090879 2090986 . + . ID=gene1899;Name=DJ40_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09540 NZ_CP008943.1 Protein Homology CDS 2090879 2090986 . + 0 ID=cds1856;Parent=gene1899;Dbxref=Genbank:WP_038400500.1;Name=WP_038400500.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400500.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2091081 2091584 . - . ID=gene1900;Name=DJ40_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09545;old_locus_tag=DJ40_1891 NZ_CP008943.1 Protein Homology CDS 2091081 2091584 . - 0 ID=cds1857;Parent=gene1900;Dbxref=Genbank:WP_011191636.1;Name=WP_011191636.1;gbkey=CDS;product=N-acetyltransferase;protein_id=WP_011191636.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2091578 2092099 . - . ID=gene1901;Name=DJ40_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09550;old_locus_tag=DJ40_1892 NZ_CP008943.1 Protein Homology CDS 2091578 2092099 . - 0 ID=cds1858;Parent=gene1901;Dbxref=Genbank:WP_002209272.1;Name=WP_002209272.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_002209272.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2092180 2092305 . + . ID=gene1902;Name=DJ40_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09555 NZ_CP008943.1 Protein Homology CDS 2092180 2092305 . + 0 ID=cds1859;Parent=gene1902;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2092415 2093410 . + . ID=gene1903;Name=DJ40_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09560;old_locus_tag=DJ40_1893 NZ_CP008943.1 Protein Homology CDS 2092415 2093410 . + 0 ID=cds1860;Parent=gene1903;Dbxref=Genbank:WP_002209270.1;Name=WP_002209270.1;gbkey=CDS;product=protease;protein_id=WP_002209270.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2093422 2094300 . + . ID=gene1904;Name=DJ40_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09565;old_locus_tag=DJ40_1894 NZ_CP008943.1 Protein Homology CDS 2093422 2094300 . + 0 ID=cds1861;Parent=gene1904;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2094441 2095847 . - . ID=gene1905;Name=DJ40_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09570;old_locus_tag=DJ40_1895 NZ_CP008943.1 Protein Homology CDS 2094441 2095847 . - 0 ID=cds1862;Parent=gene1905;Dbxref=Genbank:WP_011191634.1;Name=WP_011191634.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_011191634.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2095849 2098974 . - . ID=gene1906;Name=DJ40_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09575;old_locus_tag=DJ40_1896 NZ_CP008943.1 Protein Homology CDS 2095849 2098974 . - 0 ID=cds1863;Parent=gene1906;Dbxref=Genbank:WP_002209267.1;Name=WP_002209267.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002209267.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2098978 2100138 . - . ID=gene1907;Name=DJ40_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09580;old_locus_tag=DJ40_1897 NZ_CP008943.1 Protein Homology CDS 2098978 2100138 . - 0 ID=cds1864;Parent=gene1907;Dbxref=Genbank:WP_002209266.1;Name=WP_002209266.1;gbkey=CDS;product=acriflavine resistance protein E;protein_id=WP_002209266.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2100646 2101701 . + . ID=gene1908;Name=DJ40_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09585;old_locus_tag=DJ40_1899 NZ_CP008943.1 Protein Homology CDS 2100646 2101701 . + 0 ID=cds1865;Parent=gene1908;Dbxref=Genbank:WP_012413453.1;Name=WP_012413453.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413453.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2101751 2101930 . + . ID=id113;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2101956 2102267 . - . ID=gene1909;Name=DJ40_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09590;old_locus_tag=DJ40_1900 NZ_CP008943.1 Protein Homology CDS 2101956 2102267 . - 0 ID=cds1866;Parent=gene1909;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2102291 2102659 . - . ID=gene1910;Name=DJ40_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09595;old_locus_tag=DJ40_1901 NZ_CP008943.1 Protein Homology CDS 2102291 2102659 . - 0 ID=cds1867;Parent=gene1910;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2102702 2102875 . - . ID=gene1911;Name=DJ40_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09600 NZ_CP008943.1 Protein Homology CDS 2102702 2102875 . - 0 ID=cds1868;Parent=gene1911;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2102895 2104889 . - . ID=gene1912;Name=DJ40_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09605;old_locus_tag=DJ40_1902 NZ_CP008943.1 Protein Homology CDS 2102895 2104889 . - 0 ID=cds1869;Parent=gene1912;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2105076 2105960 . - . ID=gene1913;Name=DJ40_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09610;old_locus_tag=DJ40_1903 NZ_CP008943.1 Protein Homology CDS 2105076 2105960 . - 0 ID=cds1870;Parent=gene1913;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2106085 2108202 . - . ID=gene1914;Name=DJ40_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09615;old_locus_tag=DJ40_1904 NZ_CP008943.1 Protein Homology CDS 2106085 2108202 . - 0 ID=cds1871;Parent=gene1914;Dbxref=Genbank:WP_002209259.1;Name=WP_002209259.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2108466 2108735 . - . ID=gene1915;Name=DJ40_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09620;old_locus_tag=DJ40_1905 NZ_CP008943.1 Protein Homology CDS 2108466 2108735 . - 0 ID=cds1872;Parent=gene1915;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2108859 2109833 . - . ID=gene1916;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=DJ40_RS09625;old_locus_tag=DJ40_1906 NZ_CP008943.1 Protein Homology CDS 2108859 2109833 . - 0 ID=cds1873;Parent=gene1916;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2109833 2110243 . - . ID=gene1917;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=DJ40_RS09630;old_locus_tag=DJ40_1907 NZ_CP008943.1 Protein Homology CDS 2109833 2110243 . - 0 ID=cds1874;Parent=gene1917;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2110309 2112987 . - . ID=gene1918;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=DJ40_RS09635;old_locus_tag=DJ40_1908 NZ_CP008943.1 Protein Homology CDS 2110309 2112987 . - 0 ID=cds1875;Parent=gene1918;Dbxref=Genbank:WP_038400506.1;Name=WP_038400506.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_038400506.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2113012 2114499 . - . ID=gene1919;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=DJ40_RS09640;old_locus_tag=DJ40_1909 NZ_CP008943.1 Protein Homology CDS 2113012 2114499 . - 0 ID=cds1876;Parent=gene1919;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2114521 2114973 . - . ID=gene1920;Name=DJ40_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09645;old_locus_tag=DJ40_1910 NZ_CP008943.1 Protein Homology CDS 2114521 2114973 . - 0 ID=cds1877;Parent=gene1920;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2115189 2115265 . - . ID=gene1921;Name=DJ40_RS09650;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS09650;old_locus_tag=DJ40_1911 NZ_CP008943.1 tRNAscan-SE tRNA 2115189 2115265 . - . ID=rna35;Parent=gene1921;anticodon=(pos:complement(2115229..2115231));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 tRNAscan-SE exon 2115189 2115265 . - . ID=id114;Parent=rna35;anticodon=(pos:complement(2115229..2115231));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 RefSeq gene 2115326 2115412 . - . ID=gene1922;Name=DJ40_RS09655;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS09655;old_locus_tag=DJ40_1912 NZ_CP008943.1 tRNAscan-SE tRNA 2115326 2115412 . - . ID=rna36;Parent=gene1922;anticodon=(pos:complement(2115376..2115378));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 2115326 2115412 . - . ID=id115;Parent=rna36;anticodon=(pos:complement(2115376..2115378));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 2115505 2115840 . - . ID=gene1923;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=DJ40_RS09660;old_locus_tag=DJ40_1913 NZ_CP008943.1 Protein Homology CDS 2115505 2115840 . - 0 ID=cds1878;Parent=gene1923;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2116063 2117403 . - . ID=gene1924;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=DJ40_RS09665;old_locus_tag=DJ40_1914 NZ_CP008943.1 Protein Homology CDS 2116063 2117403 . - 0 ID=cds1879;Parent=gene1924;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2117413 2118246 . - . ID=gene1925;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=DJ40_RS09670;old_locus_tag=DJ40_1915 NZ_CP008943.1 Protein Homology CDS 2117413 2118246 . - 0 ID=cds1880;Parent=gene1925;Dbxref=Genbank:WP_011191630.1;Name=WP_011191630.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_011191630.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2118366 2120300 . - . ID=gene1926;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=DJ40_RS09675;old_locus_tag=DJ40_1916 NZ_CP008943.1 Protein Homology CDS 2118366 2120300 . - 0 ID=cds1881;Parent=gene1926;Dbxref=Genbank:WP_002228195.1;Name=WP_002228195.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_002228195.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2120357 2120986 . - . ID=gene1927;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=DJ40_RS09680;old_locus_tag=DJ40_1917 NZ_CP008943.1 Protein Homology CDS 2120357 2120986 . - 0 ID=cds1882;Parent=gene1927;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2121133 2121426 . + . ID=gene1928;Name=DJ40_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09685;old_locus_tag=DJ40_1918 NZ_CP008943.1 Protein Homology CDS 2121133 2121426 . + 0 ID=cds1883;Parent=gene1928;Dbxref=Genbank:WP_002210185.1;Name=WP_002210185.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002210185.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2121554 2122030 . - . ID=gene1929;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=DJ40_RS09690;old_locus_tag=DJ40_1919 NZ_CP008943.1 Protein Homology CDS 2121554 2122030 . - 0 ID=cds1884;Parent=gene1929;Dbxref=Genbank:WP_002210184.1;Name=WP_002210184.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2122288 2123736 . + . ID=gene1930;Name=DJ40_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09695;old_locus_tag=DJ40_1920 NZ_CP008943.1 Protein Homology CDS 2122288 2123736 . + 0 ID=cds1885;Parent=gene1930;Dbxref=Genbank:WP_002217314.1;Name=WP_002217314.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002217314.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2123742 2124404 . + . ID=gene1931;Name=DJ40_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09700;old_locus_tag=DJ40_1921 NZ_CP008943.1 Protein Homology CDS 2123742 2124404 . + 0 ID=cds1886;Parent=gene1931;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2124401 2125468 . + . ID=gene1932;Name=DJ40_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09705;old_locus_tag=DJ40_1922 NZ_CP008943.1 Protein Homology CDS 2124401 2125468 . + 0 ID=cds1887;Parent=gene1932;Dbxref=Genbank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002210182.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2125563 2126735 . - . ID=gene1933;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=DJ40_RS09710;old_locus_tag=DJ40_1923 NZ_CP008943.1 Protein Homology CDS 2125563 2126735 . - 0 ID=cds1888;Parent=gene1933;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2126832 2127050 . - . ID=gene1934;Name=DJ40_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09715 NZ_CP008943.1 GeneMarkS+ CDS 2126832 2127050 . - 0 ID=cds1889;Parent=gene1934;Dbxref=Genbank:WP_033848904.1;Name=WP_033848904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033848904.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2127276 2127647 . + . ID=gene1935;Name=DJ40_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09720;old_locus_tag=DJ40_1924 NZ_CP008943.1 Protein Homology CDS 2127276 2127647 . + 0 ID=cds1890;Parent=gene1935;Dbxref=Genbank:WP_038400512.1;Name=WP_038400512.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400512.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2127780 2128034 . - . ID=gene1936;Name=DJ40_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09725;old_locus_tag=DJ40_1925 NZ_CP008943.1 Protein Homology CDS 2127780 2128034 . - 0 ID=cds1891;Parent=gene1936;Dbxref=Genbank:WP_033853101.1;Name=WP_033853101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033853101.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2128411 2129035 . + . ID=id116;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2128421 2128759 . - . ID=gene1937;Name=DJ40_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09730 NZ_CP008943.1 Protein Homology CDS 2128421 2128759 . - 0 ID=cds1892;Parent=gene1937;Dbxref=Genbank:WP_038400515.1;Name=WP_038400515.1;gbkey=CDS;product=terminase;protein_id=WP_038400515.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2128737 2129023 . - . ID=gene1938;Name=DJ40_RS09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS09735;pseudo=true NZ_CP008943.1 Protein Homology CDS 2128737 2129023 . - 0 ID=cds1893;Parent=gene1938;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase small subunit;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2129295 2129783 . - . ID=gene1939;Name=DJ40_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09740;old_locus_tag=DJ40_1927 NZ_CP008943.1 Protein Homology CDS 2129295 2129783 . - 0 ID=cds1894;Parent=gene1939;Dbxref=Genbank:WP_038400516.1;Name=WP_038400516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400516.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2129796 2130944 . - . ID=gene1940;Name=DJ40_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09745 NZ_CP008943.1 Protein Homology CDS 2129796 2130944 . - 0 ID=cds1895;Parent=gene1940;Dbxref=Genbank:WP_038400519.1;Name=WP_038400519.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_038400519.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2130309 2135034 . + . ID=id117;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2131491 2134199 . - . ID=gene1941;Name=DJ40_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09750;old_locus_tag=DJ40_1929 NZ_CP008943.1 Protein Homology CDS 2131491 2134199 . - 0 ID=cds1896;Parent=gene1941;Dbxref=Genbank:WP_038400521.1;Name=WP_038400521.1;gbkey=CDS;product=DNA primase;protein_id=WP_038400521.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2134193 2134498 . - . ID=gene1942;Name=DJ40_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09755;old_locus_tag=DJ40_1930 NZ_CP008943.1 Protein Homology CDS 2134193 2134498 . - 0 ID=cds1897;Parent=gene1942;Dbxref=Genbank:WP_038400523.1;Name=WP_038400523.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400523.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2134652 2134846 . - . ID=gene1943;Name=DJ40_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09765;old_locus_tag=DJ40_1932 NZ_CP008943.1 Protein Homology CDS 2134652 2134846 . - 0 ID=cds1898;Parent=gene1943;Dbxref=Genbank:WP_038400527.1;Name=WP_038400527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400527.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2134839 2135021 . - . ID=gene1944;Name=DJ40_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09770 NZ_CP008943.1 Protein Homology CDS 2134839 2135021 . - 0 ID=cds1899;Parent=gene1944;Dbxref=Genbank:WP_038401650.1;Name=WP_038401650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401650.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2135371 2135793 . + . ID=id118;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2135912 2136922 . - . ID=gene1945;Name=DJ40_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09775;old_locus_tag=DJ40_1934 NZ_CP008943.1 Protein Homology CDS 2135912 2136922 . - 0 ID=cds1900;Parent=gene1945;Dbxref=Genbank:WP_038400530.1;Name=WP_038400530.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400530.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2136937 2137218 . - . ID=gene1946;Name=DJ40_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09780;old_locus_tag=DJ40_1935 NZ_CP008943.1 Protein Homology CDS 2136937 2137218 . - 0 ID=cds1901;Parent=gene1946;Dbxref=Genbank:WP_038400532.1;Name=WP_038400532.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038400532.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2137331 2138116 . - . ID=gene1947;Name=DJ40_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21880;old_locus_tag=DJ40_1936 NZ_CP008943.1 Protein Homology CDS 2137331 2138116 . - 0 ID=cds1902;Parent=gene1947;Dbxref=Genbank:WP_049862783.1;Name=WP_049862783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862783.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2138113 2139333 . - . ID=gene1948;Name=DJ40_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09790;old_locus_tag=DJ40_1937 NZ_CP008943.1 Protein Homology CDS 2138113 2139333 . - 0 ID=cds1903;Parent=gene1948;Dbxref=Genbank:WP_038400535.1;Name=WP_038400535.1;gbkey=CDS;product=integrase;protein_id=WP_038400535.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2139496 2140482 . - . ID=gene1949;Name=DJ40_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09795;old_locus_tag=DJ40_1938 NZ_CP008943.1 Protein Homology CDS 2139496 2140482 . - 0 ID=cds1904;Parent=gene1949;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2140570 2140827 . - . ID=gene1950;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=DJ40_RS09800;old_locus_tag=DJ40_1939 NZ_CP008943.1 Protein Homology CDS 2140570 2140827 . - 0 ID=cds1905;Parent=gene1950;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2140847 2141158 . - . ID=gene1951;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=DJ40_RS09805;old_locus_tag=DJ40_1940 NZ_CP008943.1 Protein Homology CDS 2140847 2141158 . - 0 ID=cds1906;Parent=gene1951;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2141418 2142389 . + . ID=gene1952;Name=DJ40_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09810;old_locus_tag=DJ40_1941 NZ_CP008943.1 Protein Homology CDS 2141418 2142389 . + 0 ID=cds1907;Parent=gene1952;Dbxref=Genbank:WP_011191628.1;Name=WP_011191628.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_011191628.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2142486 2142833 . - . ID=gene1953;Name=DJ40_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09815;old_locus_tag=DJ40_1942 NZ_CP008943.1 Protein Homology CDS 2142486 2142833 . - 0 ID=cds1908;Parent=gene1953;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2143017 2143292 . + . ID=gene1954;Name=DJ40_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09820;old_locus_tag=DJ40_1943 NZ_CP008943.1 Protein Homology CDS 2143017 2143292 . + 0 ID=cds1909;Parent=gene1954;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2143726 2144664 . - . ID=gene1955;Name=DJ40_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09825;old_locus_tag=DJ40_1944 NZ_CP008943.1 Protein Homology CDS 2143726 2144664 . - 0 ID=cds1910;Parent=gene1955;Dbxref=Genbank:WP_038400538.1;Name=WP_038400538.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_038400538.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2145128 2145598 . + . ID=gene1956;Name=DJ40_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09830;old_locus_tag=DJ40_1945 NZ_CP008943.1 Protein Homology CDS 2145128 2145598 . + 0 ID=cds1911;Parent=gene1956;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2145987 2146250 . + . ID=gene1957;Name=DJ40_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09835;old_locus_tag=DJ40_1946 NZ_CP008943.1 Protein Homology CDS 2145987 2146250 . + 0 ID=cds1912;Parent=gene1957;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2146253 2146459 . - . ID=gene1958;Name=DJ40_RS09840;gbkey=Gene;gene_biotype=other;locus_tag=DJ40_RS09840 NZ_CP008943.1 RefSeq repeat_region 2146275 2146444 . + . ID=id119;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2146546 2147931 . - . ID=gene1959;Name=DJ40_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09845;old_locus_tag=DJ40_1947 NZ_CP008943.1 Protein Homology CDS 2146546 2147931 . - 0 ID=cds1913;Parent=gene1959;Dbxref=Genbank:WP_011191627.1;Name=WP_011191627.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_011191627.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2148102 2149115 . + . ID=gene1960;Name=DJ40_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09850;old_locus_tag=DJ40_1948 NZ_CP008943.1 Protein Homology CDS 2148102 2149115 . + 0 ID=cds1914;Parent=gene1960;Dbxref=Genbank:WP_011191626.1;Name=WP_011191626.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_011191626.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2149315 2149842 . + . ID=gene1961;Name=DJ40_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09855;old_locus_tag=DJ40_1949 NZ_CP008943.1 Protein Homology CDS 2149315 2149842 . + 0 ID=cds1915;Parent=gene1961;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2149960 2150316 . - . ID=gene1962;Name=DJ40_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09860;old_locus_tag=DJ40_1950 NZ_CP008943.1 Protein Homology CDS 2149960 2150316 . - 0 ID=cds1916;Parent=gene1962;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2150319 2154215 . - . ID=gene1963;Name=DJ40_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09865;old_locus_tag=DJ40_1951 NZ_CP008943.1 Protein Homology CDS 2150319 2154215 . - 0 ID=cds1917;Parent=gene1963;Dbxref=Genbank:WP_038400541.1;Name=WP_038400541.1;gbkey=CDS;product=translocation and assembly module TamB;protein_id=WP_038400541.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2154212 2155948 . - . ID=gene1964;Name=DJ40_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09870;old_locus_tag=DJ40_1952 NZ_CP008943.1 Protein Homology CDS 2154212 2155948 . - 0 ID=cds1918;Parent=gene1964;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2156223 2156861 . + . ID=gene1965;Name=DJ40_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09875;old_locus_tag=DJ40_1953 NZ_CP008943.1 Protein Homology CDS 2156223 2156861 . + 0 ID=cds1919;Parent=gene1965;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2157139 2158470 . + . ID=gene1966;Name=DJ40_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09880;old_locus_tag=DJ40_1954 NZ_CP008943.1 Protein Homology CDS 2157139 2158470 . + 0 ID=cds1920;Parent=gene1966;Dbxref=Genbank:WP_002210164.1;Name=WP_002210164.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210164.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2158578 2158790 . - . ID=gene1967;Name=DJ40_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09885;old_locus_tag=DJ40_1955 NZ_CP008943.1 Protein Homology CDS 2158578 2158790 . - 0 ID=cds1921;Parent=gene1967;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2159126 2159689 . + . ID=gene1968;Name=DJ40_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09890;old_locus_tag=DJ40_1956 NZ_CP008943.1 Protein Homology CDS 2159126 2159689 . + 0 ID=cds1922;Parent=gene1968;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2159692 2160432 . - . ID=gene1969;Name=DJ40_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09895;old_locus_tag=DJ40_1957 NZ_CP008943.1 Protein Homology CDS 2159692 2160432 . - 0 ID=cds1923;Parent=gene1969;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2160885 2162855 . + . ID=gene1970;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=DJ40_RS09900;old_locus_tag=DJ40_1958 NZ_CP008943.1 Protein Homology CDS 2160885 2162855 . + 0 ID=cds1924;Parent=gene1970;Dbxref=Genbank:WP_032466988.1;Name=WP_032466988.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=WP_032466988.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2162984 2163649 . + . ID=gene1971;Name=DJ40_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09905;old_locus_tag=DJ40_1959 NZ_CP008943.1 Protein Homology CDS 2162984 2163649 . + 0 ID=cds1925;Parent=gene1971;Dbxref=Genbank:WP_011191621.1;Name=WP_011191621.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_011191621.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2163747 2164367 . - . ID=gene1972;Name=DJ40_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09910;old_locus_tag=DJ40_1960 NZ_CP008943.1 Protein Homology CDS 2163747 2164367 . - 0 ID=cds1926;Parent=gene1972;Dbxref=Genbank:WP_011191620.1;Name=WP_011191620.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_011191620.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2164716 2165456 . + . ID=gene1973;Name=DJ40_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09915;old_locus_tag=DJ40_1961 NZ_CP008943.1 Protein Homology CDS 2164716 2165456 . + 0 ID=cds1927;Parent=gene1973;Dbxref=Genbank:WP_002210158.1;Name=WP_002210158.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_002210158.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2165596 2166051 . + . ID=gene1974;Name=DJ40_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09920;old_locus_tag=DJ40_1962 NZ_CP008943.1 Protein Homology CDS 2165596 2166051 . + 0 ID=cds1928;Parent=gene1974;Dbxref=Genbank:WP_038400544.1;Name=WP_038400544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400544.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2166117 2166569 . - . ID=gene1975;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=DJ40_RS09925;old_locus_tag=DJ40_1963 NZ_CP008943.1 Protein Homology CDS 2166117 2166569 . - 0 ID=cds1929;Parent=gene1975;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2166609 2166836 . - . ID=gene1976;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=DJ40_RS09930;old_locus_tag=DJ40_1964 NZ_CP008943.1 Protein Homology CDS 2166609 2166836 . - 0 ID=cds1930;Parent=gene1976;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2166841 2167158 . - . ID=gene1977;Name=DJ40_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09935 NZ_CP008943.1 Protein Homology CDS 2166841 2167158 . - 0 ID=cds1931;Parent=gene1977;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2167167 2167559 . - . ID=gene1978;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=DJ40_RS09940;old_locus_tag=DJ40_1965 NZ_CP008943.1 Protein Homology CDS 2167167 2167559 . - 0 ID=cds1932;Parent=gene1978;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2167573 2167851 . - . ID=gene1979;Name=DJ40_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09945;old_locus_tag=DJ40_1966 NZ_CP008943.1 Protein Homology CDS 2167573 2167851 . - 0 ID=cds1933;Parent=gene1979;Dbxref=Genbank:WP_011191619.1;Name=WP_011191619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191619.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2167927 2168676 . - . ID=gene1980;Name=DJ40_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09950;old_locus_tag=DJ40_1967 NZ_CP008943.1 Protein Homology CDS 2167927 2168676 . - 0 ID=cds1934;Parent=gene1980;Dbxref=Genbank:WP_011191618.1;Name=WP_011191618.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_011191618.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2168867 2169178 . + . ID=gene1981;Name=DJ40_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09955;old_locus_tag=DJ40_1968 NZ_CP008943.1 Protein Homology CDS 2168867 2169178 . + 0 ID=cds1935;Parent=gene1981;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2169250 2170881 . - . ID=gene1982;Name=DJ40_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09960;old_locus_tag=DJ40_1969 NZ_CP008943.1 Protein Homology CDS 2169250 2170881 . - 0 ID=cds1936;Parent=gene1982;Dbxref=Genbank:WP_032484797.1;Name=WP_032484797.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl-CoA dehydrogenase;protein_id=WP_032484797.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2171051 2171225 . + . ID=id120;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2171301 2172041 . - . ID=gene1983;Name=DJ40_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09965;old_locus_tag=DJ40_1970 NZ_CP008943.1 Protein Homology CDS 2171301 2172041 . - 0 ID=cds1937;Parent=gene1983;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2172160 2174694 . - . ID=gene1984;Name=DJ40_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09970;old_locus_tag=DJ40_1971 NZ_CP008943.1 Protein Homology CDS 2172160 2174694 . - 0 ID=cds1938;Parent=gene1984;Dbxref=Genbank:WP_038400547.1;Name=WP_038400547.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_038400547.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2174935 2175360 . - . ID=gene1985;Name=DJ40_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09975;old_locus_tag=DJ40_1972 NZ_CP008943.1 Protein Homology CDS 2174935 2175360 . - 0 ID=cds1939;Parent=gene1985;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2175749 2177047 . - . ID=gene1986;Name=DJ40_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09980;old_locus_tag=DJ40_1973 NZ_CP008943.1 Protein Homology CDS 2175749 2177047 . - 0 ID=cds1940;Parent=gene1986;Dbxref=Genbank:WP_002209157.1;Name=WP_002209157.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_002209157.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2177147 2177347 . - . ID=gene1987;Name=DJ40_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09985;old_locus_tag=DJ40_1974 NZ_CP008943.1 Protein Homology CDS 2177147 2177347 . - 0 ID=cds1941;Parent=gene1987;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2177519 2178523 . - . ID=gene1988;Name=DJ40_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09990;old_locus_tag=DJ40_1975 NZ_CP008943.1 Protein Homology CDS 2177519 2178523 . - 0 ID=cds1942;Parent=gene1988;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2178527 2179789 . - . ID=gene1989;Name=DJ40_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS09995;old_locus_tag=DJ40_1976 NZ_CP008943.1 Protein Homology CDS 2178527 2179789 . - 0 ID=cds1943;Parent=gene1989;Dbxref=Genbank:WP_011191616.1;Name=WP_011191616.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_011191616.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2180030 2181316 . - . ID=gene1990;Name=DJ40_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10000;old_locus_tag=DJ40_1977 NZ_CP008943.1 Protein Homology CDS 2180030 2181316 . - 0 ID=cds1944;Parent=gene1990;Dbxref=Genbank:WP_012105752.1;Name=WP_012105752.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_012105752.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2181415 2181720 . - . ID=gene1991;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=DJ40_RS10005;old_locus_tag=DJ40_1978 NZ_CP008943.1 Protein Homology CDS 2181415 2181720 . - 0 ID=cds1945;Parent=gene1991;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2181837 2182778 . - . ID=gene1992;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=DJ40_RS10010;old_locus_tag=DJ40_1979 NZ_CP008943.1 Protein Homology CDS 2181837 2182778 . - 0 ID=cds1946;Parent=gene1992;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2182771 2184678 . - . ID=gene1993;Name=DJ40_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10015;old_locus_tag=DJ40_1980 NZ_CP008943.1 Protein Homology CDS 2182771 2184678 . - 0 ID=cds1947;Parent=gene1993;Dbxref=Genbank:WP_002209148.1;Name=WP_002209148.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_002209148.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2184694 2186607 . - . ID=gene1994;Name=DJ40_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10020;old_locus_tag=DJ40_1981 NZ_CP008943.1 Protein Homology CDS 2184694 2186607 . - 0 ID=cds1948;Parent=gene1994;Dbxref=Genbank:WP_032466063.1;Name=WP_032466063.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_032466063.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2186615 2187085 . - . ID=gene1995;Name=DJ40_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10025;old_locus_tag=DJ40_1982 NZ_CP008943.1 Protein Homology CDS 2186615 2187085 . - 0 ID=cds1949;Parent=gene1995;Dbxref=Genbank:WP_011191614.1;Name=WP_011191614.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_011191614.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2187096 2188610 . - . ID=gene1996;Name=DJ40_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10030;old_locus_tag=DJ40_1983 NZ_CP008943.1 Protein Homology CDS 2187096 2188610 . - 0 ID=cds1950;Parent=gene1996;Dbxref=Genbank:WP_038400552.1;Name=WP_038400552.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_038400552.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2188609 2189844 . + . ID=gene1997;Name=DJ40_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10035;old_locus_tag=DJ40_1984 NZ_CP008943.1 Protein Homology CDS 2188609 2189844 . + 0 ID=cds1951;Parent=gene1997;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2190156 2190231 . - . ID=gene1998;Name=DJ40_RS10040;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10040;old_locus_tag=DJ40_1985 NZ_CP008943.1 tRNAscan-SE tRNA 2190156 2190231 . - . ID=rna37;Parent=gene1998;anticodon=(pos:complement(2190196..2190198));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 tRNAscan-SE exon 2190156 2190231 . - . ID=id121;Parent=rna37;anticodon=(pos:complement(2190196..2190198));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 RefSeq gene 2190299 2190374 . - . ID=gene1999;Name=DJ40_RS10045;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10045;old_locus_tag=DJ40_1987 NZ_CP008943.1 tRNAscan-SE tRNA 2190299 2190374 . - . ID=rna38;Parent=gene1999;anticodon=(pos:complement(2190339..2190341));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 tRNAscan-SE exon 2190299 2190374 . - . ID=id122;Parent=rna38;anticodon=(pos:complement(2190339..2190341));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 RefSeq gene 2190466 2190541 . - . ID=gene2000;Name=DJ40_RS10050;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10050;old_locus_tag=DJ40_1988 NZ_CP008943.1 tRNAscan-SE tRNA 2190466 2190541 . - . ID=rna39;Parent=gene2000;anticodon=(pos:complement(2190506..2190508));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 tRNAscan-SE exon 2190466 2190541 . - . ID=id123;Parent=rna39;anticodon=(pos:complement(2190506..2190508));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 RefSeq repeat_region 2190745 2191087 . + . ID=id124;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2191099 2191644 . - . ID=gene2001;Name=DJ40_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10060;old_locus_tag=DJ40_1989 NZ_CP008943.1 Protein Homology CDS 2191099 2191644 . - 0 ID=cds1952;Parent=gene2001;Dbxref=Genbank:WP_002209143.1;Name=WP_002209143.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_002209143.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2191643 2191837 . + . ID=gene2002;Name=DJ40_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10065 NZ_CP008943.1 Protein Homology CDS 2191643 2191837 . + 0 ID=cds1953;Parent=gene2002;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2191844 2192896 . + . ID=gene2003;Name=DJ40_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10070;old_locus_tag=DJ40_1990 NZ_CP008943.1 Protein Homology CDS 2191844 2192896 . + 0 ID=cds1954;Parent=gene2003;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2192933 2193395 . + . ID=id125;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2193467 2194348 . + . ID=gene2004;Name=DJ40_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10075;old_locus_tag=DJ40_1991 NZ_CP008943.1 Protein Homology CDS 2193467 2194348 . + 0 ID=cds1955;Parent=gene2004;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2194390 2197731 . + . ID=gene2005;Name=DJ40_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10080;old_locus_tag=DJ40_1992 NZ_CP008943.1 Protein Homology CDS 2194390 2197731 . + 0 ID=cds1956;Parent=gene2005;Dbxref=Genbank:WP_012105755.1;Name=WP_012105755.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_012105755.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2197850 2197954 . + . ID=id126;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2197976 2198953 . - . ID=gene2006;Name=DJ40_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10085;old_locus_tag=DJ40_1993 NZ_CP008943.1 Protein Homology CDS 2197976 2198953 . - 0 ID=cds1957;Parent=gene2006;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2199113 2199304 . - . ID=gene2007;Name=DJ40_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10090 NZ_CP008943.1 Protein Homology CDS 2199113 2199304 . - 0 ID=cds1958;Parent=gene2007;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2199411 2201225 . + . ID=gene2008;Name=DJ40_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10095;old_locus_tag=DJ40_1994 NZ_CP008943.1 Protein Homology CDS 2199411 2201225 . + 0 ID=cds1959;Parent=gene2008;Dbxref=Genbank:WP_032466066.1;Name=WP_032466066.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase;protein_id=WP_032466066.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2201218 2201952 . + . ID=gene2009;Name=DJ40_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10100;old_locus_tag=DJ40_1995 NZ_CP008943.1 Protein Homology CDS 2201218 2201952 . + 0 ID=cds1960;Parent=gene2009;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2201969 2202361 . + . ID=gene2010;Name=DJ40_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10105;old_locus_tag=DJ40_1996 NZ_CP008943.1 Protein Homology CDS 2201969 2202361 . + 0 ID=cds1961;Parent=gene2010;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2202378 2202734 . + . ID=gene2011;Name=DJ40_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10110;old_locus_tag=DJ40_1997 NZ_CP008943.1 Protein Homology CDS 2202378 2202734 . + 0 ID=cds1962;Parent=gene2011;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2202899 2203213 . - . ID=gene2012;Name=DJ40_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10115;old_locus_tag=DJ40_1998 NZ_CP008943.1 Protein Homology CDS 2202899 2203213 . - 0 ID=cds1963;Parent=gene2012;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2203460 2204026 . - . ID=gene2013;Name=DJ40_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10120;old_locus_tag=DJ40_1999 NZ_CP008943.1 Protein Homology CDS 2203460 2204026 . - 0 ID=cds1964;Parent=gene2013;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2204062 2205090 . + . ID=gene2014;Name=DJ40_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10125;old_locus_tag=DJ40_2000 NZ_CP008943.1 Protein Homology CDS 2204062 2205090 . + 0 ID=cds1965;Parent=gene2014;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2205304 2205478 . + . ID=id127;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2205562 2205960 . - . ID=gene2015;Name=DJ40_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10130;old_locus_tag=DJ40_2001 NZ_CP008943.1 Protein Homology CDS 2205562 2205960 . - 0 ID=cds1966;Parent=gene2015;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2206585 2208231 . - . ID=gene2016;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=DJ40_RS10135;old_locus_tag=DJ40_2002 NZ_CP008943.1 Protein Homology CDS 2206585 2208231 . - 0 ID=cds1967;Parent=gene2016;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2208278 2208571 . - . ID=gene2017;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=DJ40_RS10140;old_locus_tag=DJ40_2003 NZ_CP008943.1 Protein Homology CDS 2208278 2208571 . - 0 ID=cds1968;Parent=gene2017;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2208826 2209404 . - . ID=gene2018;Name=DJ40_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10145;old_locus_tag=DJ40_2004 NZ_CP008943.1 Protein Homology CDS 2208826 2209404 . - 0 ID=cds1969;Parent=gene2018;Dbxref=Genbank:WP_002209126.1;Name=WP_002209126.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_002209126.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2209852 2211288 . + . ID=gene2019;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=DJ40_RS10150;old_locus_tag=DJ40_2005 NZ_CP008943.1 Protein Homology CDS 2209852 2211288 . + 0 ID=cds1970;Parent=gene2019;Dbxref=Genbank:WP_038400557.1;Name=WP_038400557.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_038400557.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2211408 2212709 . + . ID=gene2020;Name=DJ40_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10155;old_locus_tag=DJ40_2006 NZ_CP008943.1 Protein Homology CDS 2211408 2212709 . + 0 ID=cds1971;Parent=gene2020;Dbxref=Genbank:WP_002209123.1;Name=WP_002209123.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002209123.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2212930 2213253 . + . ID=gene2021;Name=DJ40_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10160;old_locus_tag=DJ40_2007 NZ_CP008943.1 Protein Homology CDS 2212930 2213253 . + 0 ID=cds1972;Parent=gene2021;Dbxref=Genbank:WP_002353622.1;Name=WP_002353622.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent ion tolerance protein CutA;protein_id=WP_002353622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2213229 2215052 . + . ID=gene2022;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=DJ40_RS10165;old_locus_tag=DJ40_2008 NZ_CP008943.1 Protein Homology CDS 2213229 2215052 . + 0 ID=cds1973;Parent=gene2022;Dbxref=Genbank:WP_038400559.1;Name=WP_038400559.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein precursor;protein_id=WP_038400559.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2215114 2217261 . - . ID=gene2023;Name=DJ40_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10170;old_locus_tag=DJ40_2009 NZ_CP008943.1 Protein Homology CDS 2215114 2217261 . - 0 ID=cds1974;Parent=gene2023;Dbxref=Genbank:WP_038400561.1;Name=WP_038400561.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_038400561.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2217284 2217841 . - . ID=gene2024;Name=DJ40_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10175;old_locus_tag=DJ40_2010 NZ_CP008943.1 Protein Homology CDS 2217284 2217841 . - 0 ID=cds1975;Parent=gene2024;Dbxref=Genbank:WP_012105759.1;Name=WP_012105759.1;gbkey=CDS;product=effector protein;protein_id=WP_012105759.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2217864 2219879 . - . ID=gene2025;Name=DJ40_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10180;old_locus_tag=DJ40_2011 NZ_CP008943.1 Protein Homology CDS 2217864 2219879 . - 0 ID=cds1976;Parent=gene2025;Dbxref=Genbank:WP_038400563.1;Name=WP_038400563.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_038400563.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2220299 2220874 . + . ID=gene2026;Name=DJ40_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10185;old_locus_tag=DJ40_2012 NZ_CP008943.1 Protein Homology CDS 2220299 2220874 . + 0 ID=cds1977;Parent=gene2026;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2220996 2221096 . + . ID=id128;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2221019 2221094 . + . ID=gene2027;Name=DJ40_RS10190;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10190;old_locus_tag=DJ40_2013 NZ_CP008943.1 tRNAscan-SE tRNA 2221019 2221094 . + . ID=rna40;Parent=gene2027;anticodon=(pos:2221052..2221054);gbkey=tRNA;product=tRNA-Phe NZ_CP008943.1 tRNAscan-SE exon 2221019 2221094 . + . ID=id129;Parent=rna40;anticodon=(pos:2221052..2221054);gbkey=tRNA;product=tRNA-Phe NZ_CP008943.1 RefSeq gene 2221528 2224083 . - . ID=gene2028;Name=DJ40_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10195;old_locus_tag=DJ40_2014 NZ_CP008943.1 Protein Homology CDS 2221528 2224083 . - 0 ID=cds1978;Parent=gene2028;Dbxref=Genbank:WP_038400565.1;Name=WP_038400565.1;gbkey=CDS;product=enhancing factor;protein_id=WP_038400565.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2224113 2224280 . - . ID=gene2029;Name=DJ40_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10200 NZ_CP008943.1 Protein Homology CDS 2224113 2224280 . - 0 ID=cds1979;Parent=gene2029;Dbxref=Genbank:WP_011191605.1;Name=WP_011191605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191605.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2224510 2224935 . + . ID=gene2030;Name=DJ40_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10205;old_locus_tag=DJ40_2016 NZ_CP008943.1 Protein Homology CDS 2224510 2224935 . + 0 ID=cds1980;Parent=gene2030;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2225371 2225661 . - . ID=gene2031;Name=DJ40_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10210;old_locus_tag=DJ40_2017 NZ_CP008943.1 Protein Homology CDS 2225371 2225661 . - 0 ID=cds1981;Parent=gene2031;Dbxref=Genbank:WP_011191604.1;Name=WP_011191604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191604.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2225815 2226849 . + . ID=gene2032;Name=DJ40_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10215;old_locus_tag=DJ40_2018 NZ_CP008943.1 Protein Homology CDS 2225815 2226849 . + 0 ID=cds1982;Parent=gene2032;Dbxref=Genbank:WP_002209111.1;Name=WP_002209111.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_002209111.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2226998 2227869 . - . ID=gene2033;Name=DJ40_RS10220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS10220;pseudo=true NZ_CP008943.1 Protein Homology CDS 2226998 2227869 . - 0 ID=cds1983;Parent=gene2033;Note=activates the expression of rhaRS in response to L-rhamnose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2228002 2228823 . - . ID=gene2034;Name=DJ40_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10225;old_locus_tag=DJ40_2021 NZ_CP008943.1 Protein Homology CDS 2228002 2228823 . - 0 ID=cds1984;Parent=gene2034;Dbxref=Genbank:WP_011191602.1;Name=WP_011191602.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_011191602.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2228905 2229048 . - . ID=gene2035;Name=DJ40_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10230;old_locus_tag=DJ40_2022 NZ_CP008943.1 Protein Homology CDS 2228905 2229048 . - 0 ID=cds1985;Parent=gene2035;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2229045 2229221 . - . ID=gene2036;Name=DJ40_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10235;old_locus_tag=DJ40_2023 NZ_CP008943.1 Protein Homology CDS 2229045 2229221 . - 0 ID=cds1986;Parent=gene2036;Dbxref=Genbank:WP_012304683.1;Name=WP_012304683.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_012304683.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2229220 2230677 . + . ID=gene2037;Name=DJ40_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10240;old_locus_tag=DJ40_2024 NZ_CP008943.1 Protein Homology CDS 2229220 2230677 . + 0 ID=cds1987;Parent=gene2037;Dbxref=Genbank:WP_002209105.1;Name=WP_002209105.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_002209105.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2230674 2231930 . + . ID=gene2038;Name=DJ40_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10245;old_locus_tag=DJ40_2025 NZ_CP008943.1 Protein Homology CDS 2230674 2231930 . + 0 ID=cds1988;Parent=gene2038;Dbxref=Genbank:WP_011191601.1;Name=WP_011191601.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_011191601.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2231943 2232767 . + . ID=gene2039;Name=DJ40_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10250;old_locus_tag=DJ40_2026 NZ_CP008943.1 Protein Homology CDS 2231943 2232767 . + 0 ID=cds1989;Parent=gene2039;Dbxref=Genbank:WP_011191600.1;Name=WP_011191600.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_011191600.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2232834 2233982 . + . ID=gene2040;Name=DJ40_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10255;old_locus_tag=DJ40_2027 NZ_CP008943.1 Protein Homology CDS 2232834 2233982 . + 0 ID=cds1990;Parent=gene2040;Dbxref=Genbank:WP_011191599.1;Name=WP_011191599.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_011191599.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2233996 2234310 . + . ID=gene2041;Name=DJ40_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10260;old_locus_tag=DJ40_2028 NZ_CP008943.1 Protein Homology CDS 2233996 2234310 . + 0 ID=cds1991;Parent=gene2041;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2234558 2235106 . - . ID=gene2042;Name=DJ40_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10265;old_locus_tag=DJ40_2029 NZ_CP008943.1 Protein Homology CDS 2234558 2235106 . - 0 ID=cds1992;Parent=gene2042;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2235688 2238531 . + . ID=gene2043;Name=DJ40_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10270;old_locus_tag=DJ40_2030 NZ_CP008943.1 Protein Homology CDS 2235688 2238531 . + 0 ID=cds1993;Parent=gene2043;Dbxref=Genbank:WP_038400569.1;Name=WP_038400569.1;gbkey=CDS;product=excinuclease ABC subunit A;protein_id=WP_038400569.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2238624 2238983 . - . ID=gene2044;Name=DJ40_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10275;old_locus_tag=DJ40_2031 NZ_CP008943.1 Protein Homology CDS 2238624 2238983 . - 0 ID=cds1994;Parent=gene2044;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2239510 2240703 . - . ID=gene2045;Name=DJ40_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10280;old_locus_tag=DJ40_2032 NZ_CP008943.1 Protein Homology CDS 2239510 2240703 . - 0 ID=cds1995;Parent=gene2045;Dbxref=Genbank:WP_038400571.1;Name=WP_038400571.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_038400571.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2240889 2241968 . - . ID=gene2046;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=DJ40_RS10285;old_locus_tag=DJ40_2033 NZ_CP008943.1 Protein Homology CDS 2240889 2241968 . - 0 ID=cds1996;Parent=gene2046;Dbxref=Genbank:WP_012304687.1;Name=WP_012304687.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_012304687.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2242065 2243471 . - . ID=gene2047;Name=DJ40_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10290;old_locus_tag=DJ40_2034 NZ_CP008943.1 Protein Homology CDS 2242065 2243471 . - 0 ID=cds1997;Parent=gene2047;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2243803 2244786 . + . ID=gene2048;Name=DJ40_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10295;old_locus_tag=DJ40_2035 NZ_CP008943.1 Protein Homology CDS 2243803 2244786 . + 0 ID=cds1998;Parent=gene2048;Dbxref=Genbank:WP_011191595.1;Name=WP_011191595.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_011191595.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2245131 2245349 . - . ID=gene2049;Name=DJ40_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10300;old_locus_tag=DJ40_2036 NZ_CP008943.1 Protein Homology CDS 2245131 2245349 . - 0 ID=cds1999;Parent=gene2049;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2245865 2246902 . - . ID=gene2050;Name=DJ40_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10305;old_locus_tag=DJ40_2037 NZ_CP008943.1 Protein Homology CDS 2245865 2246902 . - 0 ID=cds2000;Parent=gene2050;Dbxref=Genbank:WP_002209092.1;Name=WP_002209092.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_002209092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2247157 2247666 . + . ID=gene2051;Name=DJ40_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10310;old_locus_tag=DJ40_2038 NZ_CP008943.1 Protein Homology CDS 2247157 2247666 . + 0 ID=cds2001;Parent=gene2051;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2247833 2248441 . - . ID=gene2052;Name=DJ40_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10315;old_locus_tag=DJ40_2039 NZ_CP008943.1 Protein Homology CDS 2247833 2248441 . - 0 ID=cds2002;Parent=gene2052;Dbxref=Genbank:WP_002209090.1;Name=WP_002209090.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_002209090.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2248566 2248937 . - . ID=gene2053;Name=DJ40_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10320;old_locus_tag=DJ40_2040 NZ_CP008943.1 Protein Homology CDS 2248566 2248937 . - 0 ID=cds2003;Parent=gene2053;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2249065 2251542 . + . ID=gene2054;Name=DJ40_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10325;old_locus_tag=DJ40_2041 NZ_CP008943.1 Protein Homology CDS 2249065 2251542 . + 0 ID=cds2004;Parent=gene2054;Dbxref=Genbank:WP_002214644.1;Name=WP_002214644.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002214644.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2251723 2252589 . - . ID=gene2055;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=DJ40_RS10330;old_locus_tag=DJ40_2042 NZ_CP008943.1 Protein Homology CDS 2251723 2252589 . - 0 ID=cds2005;Parent=gene2055;Dbxref=Genbank:WP_012105834.1;Name=WP_012105834.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_012105834.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2252755 2253279 . - . ID=gene2056;Name=DJ40_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10335;old_locus_tag=DJ40_2043 NZ_CP008943.1 Protein Homology CDS 2252755 2253279 . - 0 ID=cds2006;Parent=gene2056;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2254112 2257921 . + . ID=gene2057;Name=DJ40_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10340;old_locus_tag=DJ40_2044 NZ_CP008943.1 Protein Homology CDS 2254112 2257921 . + 0 ID=cds2007;Parent=gene2057;Dbxref=Genbank:WP_038400573.1;Name=WP_038400573.1;gbkey=CDS;product=autotransporter;protein_id=WP_038400573.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2255795 2256330 . + . ID=id130;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2256368 2257929 . + . ID=id131;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2258068 2258242 . + . ID=id132;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2258265 2260322 . - . ID=gene2058;Name=DJ40_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10345;old_locus_tag=DJ40_2045 NZ_CP008943.1 Protein Homology CDS 2258265 2260322 . - 0 ID=cds2008;Parent=gene2058;Dbxref=Genbank:WP_011191591.1;Name=WP_011191591.1;gbkey=CDS;product=FAD-binding protein;protein_id=WP_011191591.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2260654 2260901 . - . ID=gene2059;Name=DJ40_RS10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS10350;pseudo=true NZ_CP008943.1 Protein Homology CDS 2260654 2260901 . - 0 ID=cds2009;Parent=gene2059;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2261332 2262651 . - . ID=gene2060;Name=DJ40_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10355;old_locus_tag=DJ40_2047 NZ_CP008943.1 Protein Homology CDS 2261332 2262651 . - 0 ID=cds2010;Parent=gene2060;Dbxref=Genbank:WP_012304692.1;Name=WP_012304692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304692.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2263913 2264095 . - . ID=gene2061;Name=DJ40_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10360 NZ_CP008943.1 Protein Homology CDS 2263913 2264095 . - 0 ID=cds2011;Parent=gene2061;Dbxref=Genbank:WP_012304693.1;Name=WP_012304693.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304693.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2264106 2264849 . - . ID=gene2062;Name=DJ40_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10365;old_locus_tag=DJ40_2048 NZ_CP008943.1 Protein Homology CDS 2264106 2264849 . - 0 ID=cds2012;Parent=gene2062;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2264921 2267299 . - . ID=gene2063;Name=DJ40_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10370;old_locus_tag=DJ40_2049 NZ_CP008943.1 Protein Homology CDS 2264921 2267299 . - 0 ID=cds2013;Parent=gene2063;Dbxref=Genbank:WP_038400577.1;Name=WP_038400577.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400577.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2267550 2268188 . - . ID=gene2064;Name=DJ40_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10375;old_locus_tag=DJ40_2050 NZ_CP008943.1 Protein Homology CDS 2267550 2268188 . - 0 ID=cds2014;Parent=gene2064;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2268901 2269476 . - . ID=gene2065;Name=DJ40_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10380;old_locus_tag=DJ40_2051 NZ_CP008943.1 Protein Homology CDS 2268901 2269476 . - 0 ID=cds2015;Parent=gene2065;Dbxref=Genbank:WP_002209079.1;Name=WP_002209079.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_002209079.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2269660 2270238 . - . ID=gene2066;Name=DJ40_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10385;old_locus_tag=DJ40_2052 NZ_CP008943.1 Protein Homology CDS 2269660 2270238 . - 0 ID=cds2016;Parent=gene2066;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2270302 2271339 . - . ID=gene2067;Name=DJ40_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10390;old_locus_tag=DJ40_2053 NZ_CP008943.1 Protein Homology CDS 2270302 2271339 . - 0 ID=cds2017;Parent=gene2067;Dbxref=Genbank:WP_012304695.1;Name=WP_012304695.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_012304695.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2271361 2271816 . - . ID=gene2068;Name=DJ40_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10395;old_locus_tag=DJ40_2054 NZ_CP008943.1 Protein Homology CDS 2271361 2271816 . - 0 ID=cds2018;Parent=gene2068;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2271849 2273021 . - . ID=gene2069;Name=DJ40_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10400;old_locus_tag=DJ40_2055 NZ_CP008943.1 Protein Homology CDS 2271849 2273021 . - 0 ID=cds2019;Parent=gene2069;Dbxref=Genbank:WP_038400580.1;Name=WP_038400580.1;gbkey=CDS;product=tellurium resistance protein TerA;protein_id=WP_038400580.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2273021 2273614 . - . ID=gene2070;Name=DJ40_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10405;old_locus_tag=DJ40_2056 NZ_CP008943.1 Protein Homology CDS 2273021 2273614 . - 0 ID=cds2020;Parent=gene2070;Dbxref=Genbank:WP_011191586.1;Name=WP_011191586.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_011191586.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2273890 2274951 . + . ID=gene2071;Name=DJ40_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10410;old_locus_tag=DJ40_2057 NZ_CP008943.1 Protein Homology CDS 2273890 2274951 . + 0 ID=cds2021;Parent=gene2071;Dbxref=Genbank:WP_011191585.1;Name=WP_011191585.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191585.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2274963 2276099 . + . ID=gene2072;Name=DJ40_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10415;old_locus_tag=DJ40_2058 NZ_CP008943.1 Protein Homology CDS 2274963 2276099 . + 0 ID=cds2022;Parent=gene2072;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2276092 2276904 . + . ID=gene2073;Name=DJ40_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10420;old_locus_tag=DJ40_2059 NZ_CP008943.1 Protein Homology CDS 2276092 2276904 . + 0 ID=cds2023;Parent=gene2073;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2276897 2277976 . + . ID=gene2074;Name=DJ40_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10425;old_locus_tag=DJ40_2060 NZ_CP008943.1 Protein Homology CDS 2276897 2277976 . + 0 ID=cds2024;Parent=gene2074;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2277976 2278935 . + . ID=gene2075;Name=DJ40_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10430;old_locus_tag=DJ40_2061 NZ_CP008943.1 Protein Homology CDS 2277976 2278935 . + 0 ID=cds2025;Parent=gene2075;Dbxref=Genbank:WP_038400583.1;Name=WP_038400583.1;gbkey=CDS;product=ATP synthase;protein_id=WP_038400583.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2279332 2279820 . + . ID=gene2076;Name=DJ40_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10435;old_locus_tag=DJ40_2062 NZ_CP008943.1 Protein Homology CDS 2279332 2279820 . + 0 ID=cds2026;Parent=gene2076;Dbxref=Genbank:WP_038400585.1;Name=WP_038400585.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_038400585.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2280135 2280935 . + . ID=gene2077;Name=DJ40_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10440;old_locus_tag=DJ40_2063 NZ_CP008943.1 Protein Homology CDS 2280135 2280935 . + 0 ID=cds2027;Parent=gene2077;Dbxref=Genbank:WP_002209067.1;Name=WP_002209067.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2281276 2282589 . + . ID=gene2078;Name=DJ40_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10445;old_locus_tag=DJ40_2064 NZ_CP008943.1 Protein Homology CDS 2281276 2282589 . + 0 ID=cds2028;Parent=gene2078;Dbxref=Genbank:WP_038400587.1;Name=WP_038400587.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=heme utilization radical SAM enzyme HutW;protein_id=WP_038400587.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2282622 2283149 . + . ID=gene2079;Name=DJ40_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10450;old_locus_tag=DJ40_2065 NZ_CP008943.1 Protein Homology CDS 2282622 2283149 . + 0 ID=cds2029;Parent=gene2079;Dbxref=Genbank:WP_032466021.1;Name=WP_032466021.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_032466021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2283183 2283833 . + . ID=gene2080;Name=DJ40_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10455;old_locus_tag=DJ40_2066 NZ_CP008943.1 Protein Homology CDS 2283183 2283833 . + 0 ID=cds2030;Parent=gene2080;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2283949 2284242 . - . ID=gene2081;Name=DJ40_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10460 NZ_CP008943.1 GeneMarkS+ CDS 2283949 2284242 . - 0 ID=cds2031;Parent=gene2081;Dbxref=Genbank:WP_032466020.1;Name=WP_032466020.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466020.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2284241 2286271 . + . ID=gene2082;Name=DJ40_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10465;old_locus_tag=DJ40_2068 NZ_CP008943.1 Protein Homology CDS 2284241 2286271 . + 0 ID=cds2032;Parent=gene2082;Dbxref=Genbank:WP_011191580.1;Name=WP_011191580.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_011191580.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2286390 2287427 . + . ID=gene2083;Name=DJ40_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10470;old_locus_tag=DJ40_2069 NZ_CP008943.1 Protein Homology CDS 2286390 2287427 . + 0 ID=cds2033;Parent=gene2083;Dbxref=Genbank:WP_002209061.1;Name=WP_002209061.1;gbkey=CDS;product=hemin transporter HmuS;protein_id=WP_002209061.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2287424 2288263 . + . ID=gene2084;Name=DJ40_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10475;old_locus_tag=DJ40_2070 NZ_CP008943.1 Protein Homology CDS 2287424 2288263 . + 0 ID=cds2034;Parent=gene2084;Dbxref=Genbank:WP_002209060.1;Name=WP_002209060.1;gbkey=CDS;product=hemin-binding periplasmic protein HmuT;protein_id=WP_002209060.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2288260 2289264 . + . ID=gene2085;Name=DJ40_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10480;old_locus_tag=DJ40_2071 NZ_CP008943.1 Protein Homology CDS 2288260 2289264 . + 0 ID=cds2035;Parent=gene2085;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2289257 2290057 . + . ID=gene2086;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=DJ40_RS10485;old_locus_tag=DJ40_2072 NZ_CP008943.1 Protein Homology CDS 2289257 2290057 . + 0 ID=cds2036;Parent=gene2086;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2290198 2291379 . - . ID=gene2087;Name=DJ40_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10490;old_locus_tag=DJ40_2073 NZ_CP008943.1 Protein Homology CDS 2290198 2291379 . - 0 ID=cds2037;Parent=gene2087;Dbxref=Genbank:WP_012105846.1;Name=WP_012105846.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_012105846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2291425 2292711 . - . ID=gene2088;Name=DJ40_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10495;old_locus_tag=DJ40_2074 NZ_CP008943.1 Protein Homology CDS 2291425 2292711 . - 0 ID=cds2038;Parent=gene2088;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2292881 2293864 . + . ID=gene2089;Name=DJ40_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10500;old_locus_tag=DJ40_2075 NZ_CP008943.1 Protein Homology CDS 2292881 2293864 . + 0 ID=cds2039;Parent=gene2089;Dbxref=Genbank:WP_002209056.1;Name=WP_002209056.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2293942 2294211 . - . ID=gene2090;Name=DJ40_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10505;old_locus_tag=DJ40_2076 NZ_CP008943.1 Protein Homology CDS 2293942 2294211 . - 0 ID=cds2040;Parent=gene2090;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2294208 2295422 . - . ID=gene2091;Name=DJ40_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10510;old_locus_tag=DJ40_2077 NZ_CP008943.1 Protein Homology CDS 2294208 2295422 . - 0 ID=cds2041;Parent=gene2091;Dbxref=Genbank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209054.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2295515 2295686 . + . ID=id133;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2295805 2296872 . - . ID=gene2092;Name=DJ40_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10515;old_locus_tag=DJ40_2078 NZ_CP008943.1 Protein Homology CDS 2295805 2296872 . - 0 ID=cds2042;Parent=gene2092;Dbxref=Genbank:WP_011191577.1;Name=WP_011191577.1;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_011191577.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2296862 2297656 . - . ID=gene2093;Name=DJ40_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10520;old_locus_tag=DJ40_2079 NZ_CP008943.1 Protein Homology CDS 2296862 2297656 . - 0 ID=cds2043;Parent=gene2093;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2297658 2297903 . - . ID=gene2094;Name=DJ40_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10525 NZ_CP008943.1 Protein Homology CDS 2297658 2297903 . - 0 ID=cds2044;Parent=gene2094;Dbxref=Genbank:WP_038400590.1;Name=WP_038400590.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_038400590.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2297855 2298511 . - . ID=gene2095;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=DJ40_RS10530;old_locus_tag=DJ40_2080 NZ_CP008943.1 Protein Homology CDS 2297855 2298511 . - 0 ID=cds2045;Parent=gene2095;Dbxref=Genbank:WP_049862812.1;Name=WP_049862812.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=type III secretion system protein SsaR;protein_id=WP_049862812.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2298638 2299600 . - . ID=gene2096;Name=DJ40_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10535;old_locus_tag=DJ40_2081 NZ_CP008943.1 Protein Homology CDS 2298638 2299600 . - 0 ID=cds2046;Parent=gene2096;Dbxref=Genbank:WP_038400592.1;Name=WP_038400592.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_038400592.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2299578 2299976 . - . ID=gene2097;Name=DJ40_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10540 NZ_CP008943.1 Protein Homology CDS 2299578 2299976 . - 0 ID=cds2047;Parent=gene2097;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2299957 2300358 . - . ID=gene2098;Name=DJ40_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10545;old_locus_tag=DJ40_2083 NZ_CP008943.1 Protein Homology CDS 2299957 2300358 . - 0 ID=cds2048;Parent=gene2098;Dbxref=Genbank:WP_002209047.1;Name=WP_002209047.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209047.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2300355 2301692 . - . ID=gene2099;Name=DJ40_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10550;old_locus_tag=DJ40_2084 NZ_CP008943.1 Protein Homology CDS 2300355 2301692 . - 0 ID=cds2049;Parent=gene2099;Dbxref=Genbank:WP_038401661.1;Name=WP_038401661.1;gbkey=CDS;product=type III secretion protein ATPase;protein_id=WP_038401661.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2301679 2303733 . - . ID=gene2100;Name=DJ40_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10555;old_locus_tag=DJ40_2085 NZ_CP008943.1 Protein Homology CDS 2301679 2303733 . - 0 ID=cds2050;Parent=gene2100;Dbxref=Genbank:WP_042592672.1;Name=WP_042592672.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_042592672.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2303720 2304367 . - . ID=gene2101;Name=DJ40_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10560;old_locus_tag=DJ40_2086 NZ_CP008943.1 Protein Homology CDS 2303720 2304367 . - 0 ID=cds2051;Parent=gene2101;Dbxref=Genbank:WP_012105853.1;Name=WP_012105853.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_012105853.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2304364 2304957 . - . ID=gene2102;Name=DJ40_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10565;old_locus_tag=DJ40_2087 NZ_CP008943.1 Protein Homology CDS 2304364 2304957 . - 0 ID=cds2052;Parent=gene2102;Dbxref=Genbank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209043.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2305152 2305883 . - . ID=gene2103;Name=DJ40_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10570;old_locus_tag=DJ40_2088 NZ_CP008943.1 Protein Homology CDS 2305152 2305883 . - 0 ID=cds2053;Parent=gene2103;Dbxref=Genbank:WP_011191572.1;Name=WP_011191572.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_011191572.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2305880 2306131 . - . ID=gene2104;Name=DJ40_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10575;old_locus_tag=DJ40_2089 NZ_CP008943.1 Protein Homology CDS 2305880 2306131 . - 0 ID=cds2054;Parent=gene2104;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2306229 2306477 . - . ID=gene2105;Name=DJ40_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10580;old_locus_tag=DJ40_2090 NZ_CP008943.1 Protein Homology CDS 2306229 2306477 . - 0 ID=cds2055;Parent=gene2105;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2306474 2306689 . - . ID=gene2106;Name=DJ40_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10585;old_locus_tag=DJ40_2091 NZ_CP008943.1 Protein Homology CDS 2306474 2306689 . - 0 ID=cds2056;Parent=gene2106;Dbxref=Genbank:WP_002216328.1;Name=WP_002216328.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002216328.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2306699 2307406 . - . ID=gene2107;Name=DJ40_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10590;old_locus_tag=DJ40_2092 NZ_CP008943.1 Protein Homology CDS 2306699 2307406 . - 0 ID=cds2057;Parent=gene2107;Dbxref=Genbank:WP_011171760.1;Name=WP_011171760.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011171760.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2307513 2307734 . - . ID=gene2108;Name=DJ40_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10595;old_locus_tag=DJ40_2093 NZ_CP008943.1 Protein Homology CDS 2307513 2307734 . - 0 ID=cds2058;Parent=gene2108;Dbxref=Genbank:WP_011191569.1;Name=WP_011191569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191569.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2307753 2308967 . - . ID=gene2109;Name=DJ40_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10600;old_locus_tag=DJ40_2094 NZ_CP008943.1 Protein Homology CDS 2307753 2308967 . - 0 ID=cds2059;Parent=gene2109;Dbxref=Genbank:WP_011191568.1;Name=WP_011191568.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_011191568.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2308969 2310468 . - . ID=gene2110;Name=DJ40_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10605;old_locus_tag=DJ40_2095 NZ_CP008943.1 Protein Homology CDS 2308969 2310468 . - 0 ID=cds2060;Parent=gene2110;Dbxref=Genbank:WP_032466605.1;Name=WP_032466605.1;gbkey=CDS;product=outer membrane secretin SsaC;protein_id=WP_032466605.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2310713 2313532 . + . ID=gene2111;Name=DJ40_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10610;old_locus_tag=DJ40_2096 NZ_CP008943.1 Protein Homology CDS 2310713 2313532 . + 0 ID=cds2061;Parent=gene2111;Dbxref=Genbank:WP_032466017.1;Name=WP_032466017.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_032466017.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2313545 2314177 . + . ID=gene2112;Name=DJ40_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10615;old_locus_tag=DJ40_2097 NZ_CP008943.1 Protein Homology CDS 2313545 2314177 . + 0 ID=cds2062;Parent=gene2112;Dbxref=Genbank:WP_012105859.1;Name=WP_012105859.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105859.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2314355 2315671 . - . ID=gene2113;Name=DJ40_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10620;old_locus_tag=DJ40_2098 NZ_CP008943.1 Protein Homology CDS 2314355 2315671 . - 0 ID=cds2063;Parent=gene2113;Dbxref=Genbank:WP_011191564.1;Name=WP_011191564.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_011191564.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2316526 2318484 . + . ID=gene2114;Name=DJ40_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10625;old_locus_tag=DJ40_2099 NZ_CP008943.1 Protein Homology CDS 2316526 2318484 . + 0 ID=cds2064;Parent=gene2114;Dbxref=Genbank:WP_038400597.1;Name=WP_038400597.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_038400597.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2318541 2318852 . + . ID=gene2115;Name=DJ40_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10630;old_locus_tag=DJ40_2100 NZ_CP008943.1 Protein Homology CDS 2318541 2318852 . + 0 ID=cds2065;Parent=gene2115;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2318849 2320504 . + . ID=gene2116;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=DJ40_RS10635;old_locus_tag=DJ40_2101 NZ_CP008943.1 Protein Homology CDS 2318849 2320504 . + 0 ID=cds2066;Parent=gene2116;Dbxref=Genbank:WP_011191562.1;Name=WP_011191562.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_011191562.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2320578 2321735 . - . ID=gene2117;Name=DJ40_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10640;old_locus_tag=DJ40_2102 NZ_CP008943.1 Protein Homology CDS 2320578 2321735 . - 0 ID=cds2067;Parent=gene2117;Dbxref=Genbank:WP_012304706.1;Name=WP_012304706.1;gbkey=CDS;product=hydrolase;protein_id=WP_012304706.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2322130 2322957 . - . ID=gene2118;Name=DJ40_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10645 NZ_CP008943.1 Protein Homology CDS 2322130 2322957 . - 0 ID=cds2068;Parent=gene2118;Dbxref=Genbank:WP_038400599.1;Name=WP_038400599.1;gbkey=CDS;product=transposase;protein_id=WP_038400599.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2322963 2323229 . - . ID=gene2119;Name=DJ40_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10650;old_locus_tag=DJ40_2104 NZ_CP008943.1 Protein Homology CDS 2322963 2323229 . - 0 ID=cds2069;Parent=gene2119;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2323312 2323547 . + . ID=id134;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2323607 2329264 . + . ID=id135;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2323697 2323812 . - . ID=gene2120;Name=DJ40_RS10655;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS10655;old_locus_tag=DJ40_2105 NZ_CP008943.1 cmsearch rRNA 2323697 2323812 . - . ID=rna41;Parent=gene2120;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 2323697 2323812 . - . ID=id136;Parent=rna41;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq gene 2323904 2326837 . - . ID=gene2121;Name=DJ40_RS10660;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS10660;old_locus_tag=DJ40_2106 NZ_CP008943.1 RefSeq rRNA 2323904 2326837 . - . ID=rna42;Parent=gene2121;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq exon 2323904 2326837 . - . ID=id137;Parent=rna42;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq gene 2327047 2327122 . - . ID=gene2122;Name=DJ40_RS10665;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10665;old_locus_tag=DJ40_2107 NZ_CP008943.1 tRNAscan-SE tRNA 2327047 2327122 . - . ID=rna43;Parent=gene2122;anticodon=(pos:complement(2327087..2327089));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 tRNAscan-SE exon 2327047 2327122 . - . ID=id138;Parent=rna43;anticodon=(pos:complement(2327087..2327089));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 RefSeq gene 2327174 2327250 . - . ID=gene2123;Name=DJ40_RS10670;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10670;old_locus_tag=DJ40_2108 NZ_CP008943.1 tRNAscan-SE tRNA 2327174 2327250 . - . ID=rna44;Parent=gene2123;anticodon=(pos:complement(2327214..2327216));gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 tRNAscan-SE exon 2327174 2327250 . - . ID=id139;Parent=rna44;anticodon=(pos:complement(2327214..2327216));gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 RefSeq gene 2327350 2328898 . - . ID=gene2124;Name=DJ40_RS10675;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS10675;old_locus_tag=DJ40_2109 NZ_CP008943.1 RefSeq rRNA 2327350 2328898 . - . ID=rna45;Parent=gene2124;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq exon 2327350 2328898 . - . ID=id140;Parent=rna45;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq gene 2329166 2329396 . - . ID=gene2125;Name=DJ40_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21885 NZ_CP008943.1 Protein Homology CDS 2329166 2329396 . - 0 ID=cds2070;Parent=gene2125;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2329577 2331166 . + . ID=gene2126;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=DJ40_RS10685;old_locus_tag=DJ40_2111 NZ_CP008943.1 Protein Homology CDS 2329577 2331166 . + 0 ID=cds2071;Parent=gene2126;Dbxref=Genbank:WP_011191559.1;Name=WP_011191559.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_011191559.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2331226 2332512 . + . ID=gene2127;Name=DJ40_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10690;old_locus_tag=DJ40_2112 NZ_CP008943.1 Protein Homology CDS 2331226 2332512 . + 0 ID=cds2072;Parent=gene2127;Dbxref=Genbank:WP_011191558.1;Name=WP_011191558.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_011191558.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2332679 2333332 . - . ID=gene2128;Name=DJ40_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10695;old_locus_tag=DJ40_2113 NZ_CP008943.1 Protein Homology CDS 2332679 2333332 . - 0 ID=cds2073;Parent=gene2128;Dbxref=Genbank:WP_012303442.1;Name=WP_012303442.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303442.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2333382 2333657 . - . ID=gene2129;Name=DJ40_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10700;old_locus_tag=DJ40_2114 NZ_CP008943.1 Protein Homology CDS 2333382 2333657 . - 0 ID=cds2074;Parent=gene2129;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2333846 2334436 . - . ID=gene2130;Name=DJ40_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10705;old_locus_tag=DJ40_2115 NZ_CP008943.1 Protein Homology CDS 2333846 2334436 . - 0 ID=cds2075;Parent=gene2130;Dbxref=Genbank:WP_002230622.1;Name=WP_002230622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2334482 2335186 . - . ID=gene2131;Name=DJ40_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10710;old_locus_tag=DJ40_2116 NZ_CP008943.1 Protein Homology CDS 2334482 2335186 . - 0 ID=cds2076;Parent=gene2131;Dbxref=Genbank:WP_011191556.1;Name=WP_011191556.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_011191556.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2335252 2336319 . - . ID=gene2132;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=DJ40_RS10715;old_locus_tag=DJ40_2117 NZ_CP008943.1 Protein Homology CDS 2335252 2336319 . - 0 ID=cds2077;Parent=gene2132;Dbxref=Genbank:WP_011191555.1;Name=WP_011191555.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_011191555.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2336438 2337181 . - . ID=gene2133;Name=DJ40_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10720;old_locus_tag=DJ40_2118 NZ_CP008943.1 Protein Homology CDS 2336438 2337181 . - 0 ID=cds2078;Parent=gene2133;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2337316 2338098 . - . ID=gene2134;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=DJ40_RS10725;old_locus_tag=DJ40_2119 NZ_CP008943.1 Protein Homology CDS 2337316 2338098 . - 0 ID=cds2079;Parent=gene2134;Dbxref=Genbank:WP_011191554.1;Name=WP_011191554.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_011191554.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2338195 2338704 . + . ID=gene2135;Name=DJ40_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10730;old_locus_tag=DJ40_2120 NZ_CP008943.1 Protein Homology CDS 2338195 2338704 . + 0 ID=cds2080;Parent=gene2135;Dbxref=Genbank:WP_011191553.1;Name=WP_011191553.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_011191553.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2338827 2339086 . + . ID=gene2136;Name=DJ40_RS21890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21890;pseudo=true NZ_CP008943.1 Protein Homology CDS 2338827 2339086 . + 0 ID=cds2081;Parent=gene2136;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2339079 2341124 . + . ID=gene2137;Name=DJ40_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10740;old_locus_tag=DJ40_2121 NZ_CP008943.1 Protein Homology CDS 2339079 2341124 . + 0 ID=cds2082;Parent=gene2137;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2341111 2341785 . + . ID=gene2138;Name=DJ40_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10745;old_locus_tag=DJ40_2122 NZ_CP008943.1 Protein Homology CDS 2341111 2341785 . + 0 ID=cds2083;Parent=gene2138;Dbxref=Genbank:WP_012303440.1;Name=WP_012303440.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_012303440.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2341775 2342572 . + . ID=gene2139;Name=DJ40_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10750;old_locus_tag=DJ40_2123 NZ_CP008943.1 Protein Homology CDS 2341775 2342572 . + 0 ID=cds2084;Parent=gene2139;Dbxref=Genbank:WP_032466797.1;Name=WP_032466797.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_032466797.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2342569 2342784 . + . ID=gene2140;Name=DJ40_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10755;old_locus_tag=DJ40_2124 NZ_CP008943.1 Protein Homology CDS 2342569 2342784 . + 0 ID=cds2085;Parent=gene2140;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2342786 2343601 . + . ID=gene2141;Name=DJ40_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10760;old_locus_tag=DJ40_2125 NZ_CP008943.1 Protein Homology CDS 2342786 2343601 . + 0 ID=cds2086;Parent=gene2141;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2343594 2344724 . + . ID=gene2142;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=DJ40_RS10765;old_locus_tag=DJ40_2126 NZ_CP008943.1 Protein Homology CDS 2343594 2344724 . + 0 ID=cds2087;Parent=gene2142;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2344767 2344879 . - . ID=gene2143;Name=DJ40_RS10770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS10770;pseudo=true NZ_CP008943.1 Protein Homology CDS 2344767 2344879 . - 0 ID=cds2088;Parent=gene2143;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2345031 2349251 . - . ID=gene2144;Name=DJ40_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10775;old_locus_tag=DJ40_2127 NZ_CP008943.1 Protein Homology CDS 2345031 2349251 . - 0 ID=cds2089;Parent=gene2144;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2349380 2353408 . - . ID=gene2145;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=DJ40_RS10780;old_locus_tag=DJ40_2128 NZ_CP008943.1 Protein Homology CDS 2349380 2353408 . - 0 ID=cds2090;Parent=gene2145;Dbxref=Genbank:WP_038400607.1;Name=WP_038400607.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_038400607.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2353751 2354119 . - . ID=gene2146;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=DJ40_RS10785;old_locus_tag=DJ40_2130 NZ_CP008943.1 Protein Homology CDS 2353751 2354119 . - 0 ID=cds2091;Parent=gene2146;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2354186 2354683 . - . ID=gene2147;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=DJ40_RS10790;old_locus_tag=DJ40_2131 NZ_CP008943.1 Protein Homology CDS 2354186 2354683 . - 0 ID=cds2092;Parent=gene2147;Dbxref=Genbank:WP_038400609.1;Name=WP_038400609.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_038400609.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2355048 2355752 . - . ID=gene2148;Name=DJ40_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10795;old_locus_tag=DJ40_2132 NZ_CP008943.1 Protein Homology CDS 2355048 2355752 . - 0 ID=cds2093;Parent=gene2148;Dbxref=Genbank:WP_002210673.1;Name=WP_002210673.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2355756 2356184 . - . ID=gene2149;Name=DJ40_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10800;old_locus_tag=DJ40_2133 NZ_CP008943.1 Protein Homology CDS 2355756 2356184 . - 0 ID=cds2094;Parent=gene2149;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2356375 2356920 . - . ID=gene2150;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=DJ40_RS10805;old_locus_tag=DJ40_2134 NZ_CP008943.1 Protein Homology CDS 2356375 2356920 . - 0 ID=cds2095;Parent=gene2150;Dbxref=Genbank:WP_002210671.1;Name=WP_002210671.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2356922 2357305 . - . ID=gene2151;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=DJ40_RS10810;old_locus_tag=DJ40_2135 NZ_CP008943.1 Protein Homology CDS 2356922 2357305 . - 0 ID=cds2096;Parent=gene2151;Dbxref=Genbank:WP_002210670.1;Name=WP_002210670.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2357556 2358740 . - . ID=gene2152;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DJ40_RS10815;old_locus_tag=DJ40_2136 NZ_CP008943.1 Protein Homology CDS 2357556 2358740 . - 0 ID=cds2097;Parent=gene2152;Dbxref=Genbank:WP_002210669.1;Name=WP_002210669.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2358849 2358924 . - . ID=gene2153;Name=DJ40_RS10820;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10820;old_locus_tag=DJ40_2137 NZ_CP008943.1 tRNAscan-SE tRNA 2358849 2358924 . - . ID=rna46;Parent=gene2153;anticodon=(pos:complement(2358889..2358891));gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 tRNAscan-SE exon 2358849 2358924 . - . ID=id141;Parent=rna46;anticodon=(pos:complement(2358889..2358891));gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 RefSeq gene 2358931 2359005 . - . ID=gene2154;Name=DJ40_RS10825;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10825;old_locus_tag=DJ40_2138 NZ_CP008943.1 tRNAscan-SE tRNA 2358931 2359005 . - . ID=rna47;Parent=gene2154;anticodon=(pos:complement(2358970..2358972));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 tRNAscan-SE exon 2358931 2359005 . - . ID=id142;Parent=rna47;anticodon=(pos:complement(2358970..2358972));gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 RefSeq gene 2359155 2359239 . - . ID=gene2155;Name=DJ40_RS10830;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10830;old_locus_tag=DJ40_2139 NZ_CP008943.1 tRNAscan-SE tRNA 2359155 2359239 . - . ID=rna48;Parent=gene2155;anticodon=(pos:complement(2359203..2359205));gbkey=tRNA;product=tRNA-Tyr NZ_CP008943.1 tRNAscan-SE exon 2359155 2359239 . - . ID=id143;Parent=rna48;anticodon=(pos:complement(2359203..2359205));gbkey=tRNA;product=tRNA-Tyr NZ_CP008943.1 RefSeq gene 2359258 2359333 . - . ID=gene2156;Name=DJ40_RS10835;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10835;old_locus_tag=DJ40_2140 NZ_CP008943.1 tRNAscan-SE tRNA 2359258 2359333 . - . ID=rna49;Parent=gene2156;anticodon=(pos:complement(2359298..2359300));gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 tRNAscan-SE exon 2359258 2359333 . - . ID=id144;Parent=rna49;anticodon=(pos:complement(2359298..2359300));gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 RefSeq gene 2359729 2360280 . + . ID=gene2157;Name=DJ40_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10840;old_locus_tag=DJ40_2141 NZ_CP008943.1 Protein Homology CDS 2359729 2360280 . + 0 ID=cds2098;Parent=gene2157;Dbxref=Genbank:WP_011191551.1;Name=WP_011191551.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_011191551.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2360491 2361441 . + . ID=gene2158;Name=DJ40_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10845;old_locus_tag=DJ40_2142 NZ_CP008943.1 Protein Homology CDS 2360491 2361441 . + 0 ID=cds2099;Parent=gene2158;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2361476 2362435 . - . ID=gene2159;Name=DJ40_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10850;old_locus_tag=DJ40_2143 NZ_CP008943.1 Protein Homology CDS 2361476 2362435 . - 0 ID=cds2100;Parent=gene2159;Dbxref=Genbank:WP_002212289.1;Name=WP_002212289.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_002212289.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2362432 2363469 . - . ID=gene2160;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=DJ40_RS10855;old_locus_tag=DJ40_2144 NZ_CP008943.1 Protein Homology CDS 2362432 2363469 . - 0 ID=cds2101;Parent=gene2160;Dbxref=Genbank:WP_038400612.1;Name=WP_038400612.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_038400612.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2363857 2369582 . + . ID=id145;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2363933 2364048 . - . ID=gene2161;Name=DJ40_RS10860;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS10860;old_locus_tag=DJ40_2145 NZ_CP008943.1 cmsearch rRNA 2363933 2364048 . - . ID=rna50;Parent=gene2161;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 2363933 2364048 . - . ID=id146;Parent=rna50;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq gene 2364141 2367074 . - . ID=gene2162;Name=DJ40_RS10865;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS10865;old_locus_tag=DJ40_2146 NZ_CP008943.1 RefSeq rRNA 2364141 2367074 . - . ID=rna51;Parent=gene2162;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq exon 2364141 2367074 . - . ID=id147;Parent=rna51;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq gene 2367284 2367359 . - . ID=gene2163;Name=DJ40_RS10870;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10870;old_locus_tag=DJ40_2147 NZ_CP008943.1 tRNAscan-SE tRNA 2367284 2367359 . - . ID=rna52;Parent=gene2163;anticodon=(pos:complement(2367324..2367326));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 tRNAscan-SE exon 2367284 2367359 . - . ID=id148;Parent=rna52;anticodon=(pos:complement(2367324..2367326));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 RefSeq gene 2367411 2367487 . - . ID=gene2164;Name=DJ40_RS10875;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS10875;old_locus_tag=DJ40_2148 NZ_CP008943.1 tRNAscan-SE tRNA 2367411 2367487 . - . ID=rna53;Parent=gene2164;anticodon=(pos:complement(2367451..2367453));gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 tRNAscan-SE exon 2367411 2367487 . - . ID=id149;Parent=rna53;anticodon=(pos:complement(2367451..2367453));gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 RefSeq gene 2367587 2369136 . - . ID=gene2165;Name=DJ40_RS10880;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS10880;old_locus_tag=DJ40_2149 NZ_CP008943.1 RefSeq rRNA 2367587 2369136 . - . ID=rna54;Parent=gene2165;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq exon 2367587 2369136 . - . ID=id150;Parent=rna54;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq gene 2369608 2370141 . - . ID=gene2166;Name=DJ40_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10890;old_locus_tag=DJ40_2150 NZ_CP008943.1 Protein Homology CDS 2369608 2370141 . - 0 ID=cds2102;Parent=gene2166;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2370163 2371614 . - . ID=gene2167;Name=DJ40_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10895;old_locus_tag=DJ40_2151 NZ_CP008943.1 Protein Homology CDS 2370163 2371614 . - 0 ID=cds2103;Parent=gene2167;Dbxref=Genbank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;product=potassium transporter;protein_id=WP_002211550.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2371654 2372265 . - . ID=gene2168;Name=DJ40_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10900;old_locus_tag=DJ40_2152 NZ_CP008943.1 Protein Homology CDS 2371654 2372265 . - 0 ID=cds2104;Parent=gene2168;Dbxref=Genbank:WP_002231137.1;Name=WP_002231137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231137.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2372265 2373596 . - . ID=gene2169;Name=DJ40_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10905;old_locus_tag=DJ40_2153 NZ_CP008943.1 Protein Homology CDS 2372265 2373596 . - 0 ID=cds2105;Parent=gene2169;Dbxref=Genbank:WP_011191548.1;Name=WP_011191548.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_011191548.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2373923 2376112 . + . ID=gene2170;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=DJ40_RS10910;old_locus_tag=DJ40_2154 NZ_CP008943.1 Protein Homology CDS 2373923 2376112 . + 0 ID=cds2106;Parent=gene2170;Dbxref=Genbank:WP_012104346.1;Name=WP_012104346.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_012104346.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2376124 2377287 . + . ID=gene2171;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=DJ40_RS10915;old_locus_tag=DJ40_2155 NZ_CP008943.1 Protein Homology CDS 2376124 2377287 . + 0 ID=cds2107;Parent=gene2171;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2377447 2378148 . - . ID=gene2172;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=DJ40_RS10920;old_locus_tag=DJ40_2156 NZ_CP008943.1 Protein Homology CDS 2377447 2378148 . - 0 ID=cds2108;Parent=gene2172;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2378203 2379699 . - . ID=gene2173;Name=DJ40_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10925;old_locus_tag=DJ40_2157 NZ_CP008943.1 Protein Homology CDS 2378203 2379699 . - 0 ID=cds2109;Parent=gene2173;Dbxref=Genbank:WP_011191546.1;Name=WP_011191546.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_011191546.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2379947 2380435 . + . ID=gene2174;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=DJ40_RS10930;old_locus_tag=DJ40_2158 NZ_CP008943.1 Protein Homology CDS 2379947 2380435 . + 0 ID=cds2110;Parent=gene2174;Dbxref=Genbank:WP_011191545.1;Name=WP_011191545.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_011191545.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2380545 2381567 . - . ID=gene2175;Name=DJ40_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10935;old_locus_tag=DJ40_2159 NZ_CP008943.1 Protein Homology CDS 2380545 2381567 . - 0 ID=cds2111;Parent=gene2175;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2381582 2382364 . - . ID=gene2176;Name=DJ40_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10940;old_locus_tag=DJ40_2160 NZ_CP008943.1 Protein Homology CDS 2381582 2382364 . - 0 ID=cds2112;Parent=gene2176;Dbxref=Genbank:WP_011906443.1;Name=WP_011906443.1;Note=magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system;gbkey=CDS;product=DNase TatD;protein_id=WP_011906443.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2382420 2383196 . - . ID=gene2177;Name=DJ40_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10945;old_locus_tag=DJ40_2161 NZ_CP008943.1 Protein Homology CDS 2382420 2383196 . - 0 ID=cds2113;Parent=gene2177;Dbxref=Genbank:WP_011191543.1;Name=WP_011191543.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_011191543.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2383199 2383861 . - . ID=gene2178;Name=DJ40_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10950;old_locus_tag=DJ40_2162 NZ_CP008943.1 Protein Homology CDS 2383199 2383861 . - 0 ID=cds2114;Parent=gene2178;Dbxref=Genbank:WP_002211537.1;Name=WP_002211537.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_002211537.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2383865 2384131 . - . ID=gene2179;Name=DJ40_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10955;old_locus_tag=DJ40_2163 NZ_CP008943.1 Protein Homology CDS 2383865 2384131 . - 0 ID=cds2115;Parent=gene2179;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2384311 2385942 . - . ID=gene2180;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=DJ40_RS10960;old_locus_tag=DJ40_2164 NZ_CP008943.1 Protein Homology CDS 2384311 2385942 . - 0 ID=cds2116;Parent=gene2180;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2385942 2386592 . - . ID=gene2181;Name=DJ40_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10965;old_locus_tag=DJ40_2165 NZ_CP008943.1 Protein Homology CDS 2385942 2386592 . - 0 ID=cds2117;Parent=gene2181;Dbxref=Genbank:WP_038400618.1;Name=WP_038400618.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400618.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2386606 2387361 . - . ID=gene2182;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=DJ40_RS10970;old_locus_tag=DJ40_2166 NZ_CP008943.1 Protein Homology CDS 2386606 2387361 . - 0 ID=cds2118;Parent=gene2182;Dbxref=Genbank:WP_002224024.1;Name=WP_002224024.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002224024.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2387453 2388958 . - . ID=gene2183;Name=DJ40_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10975;old_locus_tag=DJ40_2167 NZ_CP008943.1 Protein Homology CDS 2387453 2388958 . - 0 ID=cds2119;Parent=gene2183;Dbxref=Genbank:WP_033852389.1;Name=WP_033852389.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_033852389.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2389166 2389696 . - . ID=gene2184;Name=DJ40_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10980;old_locus_tag=DJ40_2168 NZ_CP008943.1 Protein Homology CDS 2389166 2389696 . - 0 ID=cds2120;Parent=gene2184;Dbxref=Genbank:WP_024063595.1;Name=WP_024063595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063595.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2389729 2389859 . + . ID=id151;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2389870 2390000 . + . ID=id152;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2390109 2391920 . - . ID=gene2185;Name=DJ40_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10985;old_locus_tag=DJ40_2169 NZ_CP008943.1 Protein Homology CDS 2390109 2391920 . - 0 ID=cds2121;Parent=gene2185;Dbxref=Genbank:WP_038400622.1;Name=WP_038400622.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_038400622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2392284 2393129 . - . ID=gene2186;Name=DJ40_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10990;old_locus_tag=DJ40_2170 NZ_CP008943.1 Protein Homology CDS 2392284 2393129 . - 0 ID=cds2122;Parent=gene2186;Dbxref=Genbank:WP_038400625.1;Name=WP_038400625.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_038400625.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2393250 2394011 . - . ID=gene2187;Name=DJ40_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS10995;old_locus_tag=DJ40_2171 NZ_CP008943.1 Protein Homology CDS 2393250 2394011 . - 0 ID=cds2123;Parent=gene2187;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2394438 2395310 . + . ID=gene2188;Name=DJ40_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11000;old_locus_tag=DJ40_2172 NZ_CP008943.1 Protein Homology CDS 2394438 2395310 . + 0 ID=cds2124;Parent=gene2188;Dbxref=Genbank:WP_012104340.1;Name=WP_012104340.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_012104340.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2395365 2397656 . - . ID=gene2189;Name=DJ40_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11005;old_locus_tag=DJ40_2173 NZ_CP008943.1 Protein Homology CDS 2395365 2397656 . - 0 ID=cds2125;Parent=gene2189;Dbxref=Genbank:WP_024063594.1;Name=WP_024063594.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_024063594.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2397747 2398700 . + . ID=gene2190;Name=DJ40_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11010;old_locus_tag=DJ40_2175 NZ_CP008943.1 Protein Homology CDS 2397747 2398700 . + 0 ID=cds2126;Parent=gene2190;Dbxref=Genbank:WP_011191537.1;Name=WP_011191537.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191537.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2398588 2399487 . - . ID=gene2191;Name=DJ40_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11015;old_locus_tag=DJ40_2174 NZ_CP008943.1 Protein Homology CDS 2398588 2399487 . - 0 ID=cds2127;Parent=gene2191;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2399840 2400796 . - . ID=gene2192;Name=DJ40_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11020;old_locus_tag=DJ40_2176 NZ_CP008943.1 Protein Homology CDS 2399840 2400796 . - 0 ID=cds2128;Parent=gene2192;Dbxref=Genbank:WP_012104338.1;Name=WP_012104338.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104338.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2400897 2401646 . - . ID=gene2193;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=DJ40_RS11025;old_locus_tag=DJ40_2177 NZ_CP008943.1 Protein Homology CDS 2400897 2401646 . - 0 ID=cds2129;Parent=gene2193;Dbxref=Genbank:WP_038400628.1;Name=WP_038400628.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_038400628.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2401643 2402717 . - . ID=gene2194;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=pseudogene;locus_tag=DJ40_RS11030;old_locus_tag=DJ40_2179;pseudo=true NZ_CP008943.1 Protein Homology CDS 2401643 2402717 . - 0 ID=cds2130;Parent=gene2194;Note=part of the UgpABCE glycerol-3-phosphate uptake system;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ugpC;product=glycerol-3-phosphate transporter ATP-binding subunit;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2402724 2403569 . - . ID=gene2195;Name=DJ40_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11035;old_locus_tag=DJ40_2180 NZ_CP008943.1 Protein Homology CDS 2402724 2403569 . - 0 ID=cds2131;Parent=gene2195;Dbxref=Genbank:WP_002211522.1;Name=WP_002211522.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211522.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2403569 2404453 . - . ID=gene2196;Name=DJ40_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11040;old_locus_tag=DJ40_2181 NZ_CP008943.1 Protein Homology CDS 2403569 2404453 . - 0 ID=cds2132;Parent=gene2196;Dbxref=Genbank:WP_011191532.1;Name=WP_011191532.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_011191532.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2404751 2406070 . - . ID=gene2197;Name=DJ40_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11045;old_locus_tag=DJ40_2182 NZ_CP008943.1 Protein Homology CDS 2404751 2406070 . - 0 ID=cds2133;Parent=gene2197;Dbxref=Genbank:WP_038400631.1;Name=WP_038400631.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_038400631.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2406625 2407116 . + . ID=gene2198;Name=DJ40_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11050;old_locus_tag=DJ40_2183 NZ_CP008943.1 Protein Homology CDS 2406625 2407116 . + 0 ID=cds2134;Parent=gene2198;Dbxref=Genbank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228181.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2407383 2409716 . + . ID=gene2199;Name=DJ40_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11055;old_locus_tag=DJ40_2184 NZ_CP008943.1 Protein Homology CDS 2407383 2409716 . + 0 ID=cds2135;Parent=gene2199;Dbxref=Genbank:WP_032467115.1;Name=WP_032467115.1;gbkey=CDS;product=alpha-related fimbriae usher protein;protein_id=WP_032467115.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2409734 2410420 . + . ID=gene2200;Name=DJ40_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11060;old_locus_tag=DJ40_2185 NZ_CP008943.1 Protein Homology CDS 2409734 2410420 . + 0 ID=cds2136;Parent=gene2200;Dbxref=Genbank:WP_038400633.1;Name=WP_038400633.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_038400633.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2410392 2411039 . + . ID=gene2201;Name=DJ40_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11065;old_locus_tag=DJ40_2186 NZ_CP008943.1 Protein Homology CDS 2410392 2411039 . + 0 ID=cds2137;Parent=gene2201;Dbxref=Genbank:WP_012304719.1;Name=WP_012304719.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304719.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2411101 2411619 . + . ID=gene2202;Name=DJ40_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11070;old_locus_tag=DJ40_2187 NZ_CP008943.1 Protein Homology CDS 2411101 2411619 . + 0 ID=cds2138;Parent=gene2202;Dbxref=Genbank:WP_012304720.1;Name=WP_012304720.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304720.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2411690 2412796 . + . ID=gene2203;Name=DJ40_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11075;old_locus_tag=DJ40_2188 NZ_CP008943.1 Protein Homology CDS 2411690 2412796 . + 0 ID=cds2139;Parent=gene2203;Dbxref=Genbank:WP_038400636.1;Name=WP_038400636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400636.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2412911 2413372 . - . ID=gene2204;Name=DJ40_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11080;old_locus_tag=DJ40_2189 NZ_CP008943.1 Protein Homology CDS 2412911 2413372 . - 0 ID=cds2140;Parent=gene2204;Dbxref=Genbank:WP_012304722.1;Name=WP_012304722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304722.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2413600 2414301 . - . ID=gene2205;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=DJ40_RS11085;old_locus_tag=DJ40_2190 NZ_CP008943.1 Protein Homology CDS 2413600 2414301 . - 0 ID=cds2141;Parent=gene2205;Dbxref=Genbank:WP_038400638.1;Name=WP_038400638.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=leucine/isoleucine/valine transporter ATP-binding subunit;protein_id=WP_038400638.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2414346 2415113 . - . ID=gene2206;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=DJ40_RS11090;old_locus_tag=DJ40_2191 NZ_CP008943.1 Protein Homology CDS 2414346 2415113 . - 0 ID=cds2142;Parent=gene2206;Dbxref=Genbank:WP_002211511.1;Name=WP_002211511.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211511.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2415110 2416396 . - . ID=gene2207;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=DJ40_RS11095;old_locus_tag=DJ40_2192 NZ_CP008943.1 Protein Homology CDS 2415110 2416396 . - 0 ID=cds2143;Parent=gene2207;Dbxref=Genbank:WP_002211510.1;Name=WP_002211510.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_002211510.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2416393 2417319 . - . ID=gene2208;Name=DJ40_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11100;old_locus_tag=DJ40_2193 NZ_CP008943.1 Protein Homology CDS 2416393 2417319 . - 0 ID=cds2144;Parent=gene2208;Dbxref=Genbank:WP_002211509.1;Name=WP_002211509.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_002211509.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2417500 2418615 . - . ID=gene2209;Name=DJ40_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11105;old_locus_tag=DJ40_2194 NZ_CP008943.1 Protein Homology CDS 2417500 2418615 . - 0 ID=cds2145;Parent=gene2209;Dbxref=Genbank:WP_032466011.1;Name=WP_032466011.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=leucine ABC transporter substrate-binding protein;protein_id=WP_032466011.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2419037 2419429 . + . ID=gene2210;Name=DJ40_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11110;old_locus_tag=DJ40_2195 NZ_CP008943.1 Protein Homology CDS 2419037 2419429 . + 0 ID=cds2146;Parent=gene2210;Dbxref=Genbank:WP_011191522.1;Name=WP_011191522.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_011191522.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2419637 2420494 . - . ID=gene2211;Name=DJ40_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11115;old_locus_tag=DJ40_2196 NZ_CP008943.1 Protein Homology CDS 2419637 2420494 . - 0 ID=cds2147;Parent=gene2211;Dbxref=Genbank:WP_002211506.1;Name=WP_002211506.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_002211506.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2420805 2421758 . - . ID=gene2212;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=DJ40_RS11120;old_locus_tag=DJ40_2197 NZ_CP008943.1 Protein Homology CDS 2420805 2421758 . - 0 ID=cds2148;Parent=gene2212;Dbxref=Genbank:WP_032466010.1;Name=WP_032466010.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_032466010.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2421748 2422416 . - . ID=gene2213;Name=DJ40_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11125;old_locus_tag=DJ40_2198 NZ_CP008943.1 Protein Homology CDS 2421748 2422416 . - 0 ID=cds2149;Parent=gene2213;Dbxref=Genbank:WP_004391337.1;Name=WP_004391337.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_004391337.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2422422 2424074 . - . ID=gene2214;Name=DJ40_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11130;old_locus_tag=DJ40_2199 NZ_CP008943.1 Protein Homology CDS 2422422 2424074 . - 0 ID=cds2150;Parent=gene2214;Dbxref=Genbank:WP_038400644.1;Name=WP_038400644.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_038400644.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2424103 2424246 . + . ID=gene2215;Name=DJ40_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11135 NZ_CP008943.1 Protein Homology CDS 2424103 2424246 . + 0 ID=cds2151;Parent=gene2215;Dbxref=Genbank:WP_032466008.1;Name=WP_032466008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466008.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2424356 2425018 . + . ID=gene2216;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=DJ40_RS11140;old_locus_tag=DJ40_2200 NZ_CP008943.1 Protein Homology CDS 2424356 2425018 . + 0 ID=cds2152;Parent=gene2216;Dbxref=Genbank:WP_002211502.1;Name=WP_002211502.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_002211502.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2425008 2425280 . + . ID=gene2217;Name=DJ40_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11145;old_locus_tag=DJ40_2201 NZ_CP008943.1 Protein Homology CDS 2425008 2425280 . + 0 ID=cds2153;Parent=gene2217;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2425467 2425886 . - . ID=gene2218;Name=DJ40_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11150;old_locus_tag=DJ40_2202 NZ_CP008943.1 Protein Homology CDS 2425467 2425886 . - 0 ID=cds2154;Parent=gene2218;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2426097 2426417 . - . ID=gene2219;Name=DJ40_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11155;old_locus_tag=DJ40_2203 NZ_CP008943.1 Protein Homology CDS 2426097 2426417 . - 0 ID=cds2155;Parent=gene2219;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2426707 2427333 . + . ID=gene2220;Name=DJ40_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11160;old_locus_tag=DJ40_2204 NZ_CP008943.1 Protein Homology CDS 2426707 2427333 . + 0 ID=cds2156;Parent=gene2220;Dbxref=Genbank:WP_002211498.1;Name=WP_002211498.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211498.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2427747 2430095 . + . ID=gene2221;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=DJ40_RS11165;old_locus_tag=DJ40_2205 NZ_CP008943.1 Protein Homology CDS 2427747 2430095 . + 0 ID=cds2157;Parent=gene2221;Dbxref=Genbank:WP_038400647.1;Name=WP_038400647.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=zinc ABC transporter ATPase;protein_id=WP_038400647.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2430163 2430417 . - . ID=gene2222;Name=DJ40_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11170;old_locus_tag=DJ40_2206 NZ_CP008943.1 Protein Homology CDS 2430163 2430417 . - 0 ID=cds2158;Parent=gene2222;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2430701 2431369 . + . ID=gene2223;Name=DJ40_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11175;old_locus_tag=DJ40_2207 NZ_CP008943.1 Protein Homology CDS 2430701 2431369 . + 0 ID=cds2159;Parent=gene2223;Dbxref=Genbank:WP_011191518.1;Name=WP_011191518.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191518.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2431499 2432026 . + . ID=gene2224;Name=DJ40_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11180;old_locus_tag=DJ40_2208 NZ_CP008943.1 Protein Homology CDS 2431499 2432026 . + 0 ID=cds2160;Parent=gene2224;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2432170 2433465 . - . ID=gene2225;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=DJ40_RS11185;old_locus_tag=DJ40_2209 NZ_CP008943.1 Protein Homology CDS 2432170 2433465 . - 0 ID=cds2161;Parent=gene2225;Dbxref=Genbank:WP_032466006.1;Name=WP_032466006.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_032466006.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2433462 2434736 . - . ID=gene2226;Name=DJ40_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11190;old_locus_tag=DJ40_2210 NZ_CP008943.1 Protein Homology CDS 2433462 2434736 . - 0 ID=cds2162;Parent=gene2226;Dbxref=Genbank:WP_012304726.1;Name=WP_012304726.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_012304726.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2434726 2436381 . - . ID=gene2227;Name=DJ40_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11195;old_locus_tag=DJ40_2211 NZ_CP008943.1 Protein Homology CDS 2434726 2436381 . - 0 ID=cds2163;Parent=gene2227;Dbxref=Genbank:WP_032466005.1;Name=WP_032466005.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_032466005.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2436555 2436653 . - . ID=gene2228;Name=DJ40_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11200 NZ_CP008943.1 Protein Homology CDS 2436555 2436653 . - 0 ID=cds2164;Parent=gene2228;Dbxref=Genbank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002216569.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2437006 2438121 . + . ID=gene2229;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=DJ40_RS11205;old_locus_tag=DJ40_2212 NZ_CP008943.1 Protein Homology CDS 2437006 2438121 . + 0 ID=cds2165;Parent=gene2229;Dbxref=Genbank:WP_002211490.1;Name=WP_002211490.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2438195 2439376 . - . ID=gene2230;Name=DJ40_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11210;old_locus_tag=DJ40_2213 NZ_CP008943.1 Protein Homology CDS 2438195 2439376 . - 0 ID=cds2166;Parent=gene2230;Dbxref=Genbank:WP_032466003.1;Name=WP_032466003.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_032466003.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2439652 2440461 . - . ID=gene2231;Name=DJ40_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11215;old_locus_tag=DJ40_2214 NZ_CP008943.1 Protein Homology CDS 2439652 2440461 . - 0 ID=cds2167;Parent=gene2231;Dbxref=Genbank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211488.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2440496 2441509 . - . ID=gene2232;Name=DJ40_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11220;old_locus_tag=DJ40_2215 NZ_CP008943.1 Protein Homology CDS 2440496 2441509 . - 0 ID=cds2168;Parent=gene2232;Dbxref=Genbank:WP_002211487.1;Name=WP_002211487.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2441705 2442325 . + . ID=gene2233;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=DJ40_RS11225;old_locus_tag=DJ40_2216 NZ_CP008943.1 Protein Homology CDS 2441705 2442325 . + 0 ID=cds2169;Parent=gene2233;Dbxref=Genbank:WP_002211486.1;Name=WP_002211486.1;gbkey=CDS;gene=rhtB;product=threonine transporter RhtB;protein_id=WP_002211486.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2442376 2442996 . - . ID=gene2234;Name=DJ40_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11230;old_locus_tag=DJ40_2217 NZ_CP008943.1 Protein Homology CDS 2442376 2442996 . - 0 ID=cds2170;Parent=gene2234;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2443103 2444935 . - . ID=gene2235;Name=DJ40_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11235;old_locus_tag=DJ40_2218 NZ_CP008943.1 Protein Homology CDS 2443103 2444935 . - 0 ID=cds2171;Parent=gene2235;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2445012 2445890 . - . ID=gene2236;Name=DJ40_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11240;old_locus_tag=DJ40_2219 NZ_CP008943.1 Protein Homology CDS 2445012 2445890 . - 0 ID=cds2172;Parent=gene2236;Dbxref=Genbank:WP_002211483.1;Name=WP_002211483.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2446112 2446582 . + . ID=gene2237;Name=DJ40_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11245;old_locus_tag=DJ40_2220 NZ_CP008943.1 Protein Homology CDS 2446112 2446582 . + 0 ID=cds2173;Parent=gene2237;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2446669 2447559 . + . ID=gene2238;Name=DJ40_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11250;old_locus_tag=DJ40_2221 NZ_CP008943.1 Protein Homology CDS 2446669 2447559 . + 0 ID=cds2174;Parent=gene2238;Dbxref=Genbank:WP_002211481.1;Name=WP_002211481.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_002211481.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2447657 2448607 . - . ID=gene2239;Name=DJ40_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11255;old_locus_tag=DJ40_2222 NZ_CP008943.1 Protein Homology CDS 2447657 2448607 . - 0 ID=cds2175;Parent=gene2239;Dbxref=Genbank:WP_038400651.1;Name=WP_038400651.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_038400651.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2449256 2450086 . - . ID=gene2240;Name=DJ40_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11260;old_locus_tag=DJ40_2223 NZ_CP008943.1 Protein Homology CDS 2449256 2450086 . - 0 ID=cds2176;Parent=gene2240;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2450112 2451344 . - . ID=gene2241;Name=DJ40_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11265;old_locus_tag=DJ40_2224 NZ_CP008943.1 Protein Homology CDS 2450112 2451344 . - 0 ID=cds2177;Parent=gene2241;Dbxref=Genbank:WP_038400654.1;Name=WP_038400654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400654.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2451772 2452521 . + . ID=gene2242;Name=DJ40_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11270;old_locus_tag=DJ40_2225 NZ_CP008943.1 Protein Homology CDS 2451772 2452521 . + 0 ID=cds2178;Parent=gene2242;Dbxref=Genbank:WP_038400656.1;Name=WP_038400656.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_038400656.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2452616 2454778 . - . ID=gene2243;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=DJ40_RS11275;old_locus_tag=DJ40_2226 NZ_CP008943.1 Protein Homology CDS 2452616 2454778 . - 0 ID=cds2179;Parent=gene2243;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2454877 2455593 . - . ID=gene2244;Name=DJ40_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11280;old_locus_tag=DJ40_2227 NZ_CP008943.1 Protein Homology CDS 2454877 2455593 . - 0 ID=cds2180;Parent=gene2244;Dbxref=Genbank:WP_011191513.1;Name=WP_011191513.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_011191513.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2455593 2456504 . - . ID=gene2245;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=DJ40_RS11285;old_locus_tag=DJ40_2228 NZ_CP008943.1 Protein Homology CDS 2455593 2456504 . - 0 ID=cds2181;Parent=gene2245;Dbxref=Genbank:WP_002211473.1;Name=WP_002211473.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2456501 2457205 . - . ID=gene2246;Name=DJ40_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11290;old_locus_tag=DJ40_2229 NZ_CP008943.1 Protein Homology CDS 2456501 2457205 . - 0 ID=cds2182;Parent=gene2246;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2457270 2458094 . - . ID=gene2247;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=DJ40_RS11295;old_locus_tag=DJ40_2230 NZ_CP008943.1 Protein Homology CDS 2457270 2458094 . - 0 ID=cds2183;Parent=gene2247;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2458262 2458462 . - . ID=gene2248;Name=DJ40_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11300;old_locus_tag=DJ40_2231 NZ_CP008943.1 Protein Homology CDS 2458262 2458462 . - 0 ID=cds2184;Parent=gene2248;Dbxref=Genbank:WP_011191511.1;Name=WP_011191511.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191511.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2458614 2458937 . + . ID=gene2249;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=DJ40_RS11305;old_locus_tag=DJ40_2232 NZ_CP008943.1 Protein Homology CDS 2458614 2458937 . + 0 ID=cds2185;Parent=gene2249;Dbxref=Genbank:WP_011191510.1;Name=WP_011191510.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_011191510.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2459123 2460631 . + . ID=gene2250;Name=DJ40_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11310;old_locus_tag=DJ40_2233 NZ_CP008943.1 Protein Homology CDS 2459123 2460631 . + 0 ID=cds2186;Parent=gene2250;Dbxref=Genbank:WP_012104305.1;Name=WP_012104305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104305.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2460722 2463274 . - . ID=gene2251;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=DJ40_RS11315;old_locus_tag=DJ40_2234 NZ_CP008943.1 Protein Homology CDS 2460722 2463274 . - 0 ID=cds2187;Parent=gene2251;Dbxref=Genbank:WP_038400660.1;Name=WP_038400660.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_038400660.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2463768 2464709 . + . ID=gene2252;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=DJ40_RS11320;old_locus_tag=DJ40_2235 NZ_CP008943.1 Protein Homology CDS 2463768 2464709 . + 0 ID=cds2188;Parent=gene2252;Dbxref=Genbank:WP_002211465.1;Name=WP_002211465.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_002211465.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2464706 2465455 . + . ID=gene2253;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=DJ40_RS11325;old_locus_tag=DJ40_2236 NZ_CP008943.1 Protein Homology CDS 2464706 2465455 . + 0 ID=cds2189;Parent=gene2253;Dbxref=Genbank:WP_002211464.1;Name=WP_002211464.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211464.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2465486 2466610 . + . ID=gene2254;Name=DJ40_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11330;old_locus_tag=DJ40_2237 NZ_CP008943.1 Protein Homology CDS 2465486 2466610 . + 0 ID=cds2190;Parent=gene2254;Dbxref=Genbank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211463.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2466613 2467833 . + . ID=gene2255;Name=DJ40_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11335;old_locus_tag=DJ40_2238 NZ_CP008943.1 Protein Homology CDS 2466613 2467833 . + 0 ID=cds2191;Parent=gene2255;Dbxref=Genbank:WP_011191505.1;Name=WP_011191505.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_011191505.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2468689 2468765 . - . ID=gene2256;Name=DJ40_RS11340;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11340;old_locus_tag=DJ40_2239 NZ_CP008943.1 tRNAscan-SE tRNA 2468689 2468765 . - . ID=rna55;Parent=gene2256;anticodon=(pos:complement(2468729..2468731));gbkey=tRNA;product=tRNA-Pro NZ_CP008943.1 tRNAscan-SE exon 2468689 2468765 . - . ID=id153;Parent=rna55;anticodon=(pos:complement(2468729..2468731));gbkey=tRNA;product=tRNA-Pro NZ_CP008943.1 RefSeq gene 2468841 2468927 . - . ID=gene2257;Name=DJ40_RS11345;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11345;old_locus_tag=DJ40_2240 NZ_CP008943.1 tRNAscan-SE tRNA 2468841 2468927 . - . ID=rna56;Parent=gene2257;anticodon=(pos:complement(2468891..2468893));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 tRNAscan-SE exon 2468841 2468927 . - . ID=id154;Parent=rna56;anticodon=(pos:complement(2468891..2468893));gbkey=tRNA;product=tRNA-Leu NZ_CP008943.1 RefSeq gene 2468944 2469019 . - . ID=gene2258;Name=DJ40_RS11350;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11350;old_locus_tag=DJ40_2242 NZ_CP008943.1 tRNAscan-SE tRNA 2468944 2469019 . - . ID=rna57;Parent=gene2258;anticodon=(pos:complement(2468984..2468986));gbkey=tRNA;product=tRNA-His NZ_CP008943.1 tRNAscan-SE exon 2468944 2469019 . - . ID=id155;Parent=rna57;anticodon=(pos:complement(2468984..2468986));gbkey=tRNA;product=tRNA-His NZ_CP008943.1 RefSeq gene 2469103 2469179 . - . ID=gene2259;Name=DJ40_RS11355;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11355;old_locus_tag=DJ40_2243 NZ_CP008943.1 tRNAscan-SE tRNA 2469103 2469179 . - . ID=rna58;Parent=gene2259;anticodon=(pos:complement(2469143..2469145));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 tRNAscan-SE exon 2469103 2469179 . - . ID=id156;Parent=rna58;anticodon=(pos:complement(2469143..2469145));gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 RefSeq gene 2469328 2470719 . - . ID=gene2260;Name=DJ40_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11360;old_locus_tag=DJ40_2244 NZ_CP008943.1 Protein Homology CDS 2469328 2470719 . - 0 ID=cds2192;Parent=gene2260;Dbxref=Genbank:WP_002220976.1;Name=WP_002220976.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220976.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2470844 2470969 . + . ID=id157;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2471243 2471983 . - . ID=gene2261;Name=DJ40_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11365;old_locus_tag=DJ40_2245 NZ_CP008943.1 Protein Homology CDS 2471243 2471983 . - 0 ID=cds2193;Parent=gene2261;Dbxref=Genbank:WP_011191504.1;Name=WP_011191504.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_011191504.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2471992 2473356 . - . ID=gene2262;Name=DJ40_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11370;old_locus_tag=DJ40_2246 NZ_CP008943.1 Protein Homology CDS 2471992 2473356 . - 0 ID=cds2194;Parent=gene2262;Dbxref=Genbank:WP_038400664.1;Name=WP_038400664.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=common antigen polymerase;protein_id=WP_038400664.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2473353 2474438 . - . ID=gene2263;Name=DJ40_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11375;old_locus_tag=DJ40_2247 NZ_CP008943.1 Protein Homology CDS 2473353 2474438 . - 0 ID=cds2195;Parent=gene2263;Dbxref=Genbank:WP_011191503.1;Name=WP_011191503.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_011191503.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2474461 2475717 . - . ID=gene2264;Name=DJ40_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11380;old_locus_tag=DJ40_2248 NZ_CP008943.1 Protein Homology CDS 2474461 2475717 . - 0 ID=cds2196;Parent=gene2264;Dbxref=Genbank:WP_038400667.1;Name=WP_038400667.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=O-antigen translocase;protein_id=WP_038400667.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2475719 2476849 . - . ID=gene2265;Name=DJ40_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11385;old_locus_tag=DJ40_2249 NZ_CP008943.1 Protein Homology CDS 2475719 2476849 . - 0 ID=cds2197;Parent=gene2265;Dbxref=Genbank:WP_038400670.1;Name=WP_038400670.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_038400670.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2476851 2477588 . - . ID=gene2266;Name=DJ40_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11390;old_locus_tag=DJ40_2250 NZ_CP008943.1 Protein Homology CDS 2476851 2477588 . - 0 ID=cds2198;Parent=gene2266;Dbxref=Genbank:WP_012304738.1;Name=WP_012304738.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_012304738.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2477566 2478447 . - . ID=gene2267;Name=DJ40_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11395;old_locus_tag=DJ40_2251 NZ_CP008943.1 Protein Homology CDS 2477566 2478447 . - 0 ID=cds2199;Parent=gene2267;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2478742 2479809 . - . ID=gene2268;Name=DJ40_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11400;old_locus_tag=DJ40_2252 NZ_CP008943.1 Protein Homology CDS 2478742 2479809 . - 0 ID=cds2200;Parent=gene2268;Dbxref=Genbank:WP_011191500.1;Name=WP_011191500.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_011191500.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2479806 2481068 . - . ID=gene2269;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=DJ40_RS11405;old_locus_tag=DJ40_2253 NZ_CP008943.1 Protein Homology CDS 2479806 2481068 . - 0 ID=cds2201;Parent=gene2269;Dbxref=Genbank:WP_002211985.1;Name=WP_002211985.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2481065 2482195 . - . ID=gene2270;Name=DJ40_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11410;old_locus_tag=DJ40_2254 NZ_CP008943.1 Protein Homology CDS 2481065 2482195 . - 0 ID=cds2202;Parent=gene2270;Dbxref=Genbank:WP_011191498.1;Name=WP_011191498.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_011191498.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2482561 2483637 . - . ID=gene2271;Name=DJ40_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11415;old_locus_tag=DJ40_2255 NZ_CP008943.1 Protein Homology CDS 2482561 2483637 . - 0 ID=cds2203;Parent=gene2271;Dbxref=Genbank:WP_012304740.1;Name=WP_012304740.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_012304740.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2483658 2484740 . - . ID=gene2272;Name=DJ40_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11420;old_locus_tag=DJ40_2256 NZ_CP008943.1 Protein Homology CDS 2483658 2484740 . - 0 ID=cds2204;Parent=gene2272;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2485274 2486533 . - . ID=gene2273;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=DJ40_RS11425;old_locus_tag=DJ40_2257 NZ_CP008943.1 Protein Homology CDS 2485274 2486533 . - 0 ID=cds2205;Parent=gene2273;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2487013 2487339 . - . ID=gene2274;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=DJ40_RS11430;old_locus_tag=DJ40_2258 NZ_CP008943.1 Protein Homology CDS 2487013 2487339 . - 0 ID=cds2206;Parent=gene2274;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2487458 2488744 . + . ID=gene2275;Name=DJ40_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11435;old_locus_tag=DJ40_2259 NZ_CP008943.1 Protein Homology CDS 2487458 2488744 . + 0 ID=cds2207;Parent=gene2275;Dbxref=Genbank:WP_038400673.1;Name=WP_038400673.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_038400673.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2488751 2490244 . + . ID=gene2276;Name=DJ40_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11440;old_locus_tag=DJ40_2260 NZ_CP008943.1 Protein Homology CDS 2488751 2490244 . + 0 ID=cds2208;Parent=gene2276;Dbxref=Genbank:WP_032466602.1;Name=WP_032466602.1;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_032466602.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2490412 2492433 . - . ID=gene2277;Name=DJ40_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11445;old_locus_tag=DJ40_2261 NZ_CP008943.1 Protein Homology CDS 2490412 2492433 . - 0 ID=cds2209;Parent=gene2277;Dbxref=Genbank:WP_002211993.1;Name=WP_002211993.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_002211993.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2492432 2492617 . + . ID=gene2278;Name=DJ40_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11450 NZ_CP008943.1 Protein Homology CDS 2492432 2492617 . + 0 ID=cds2210;Parent=gene2278;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2492637 2492918 . + . ID=gene2279;Name=DJ40_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11455;old_locus_tag=DJ40_2262 NZ_CP008943.1 Protein Homology CDS 2492637 2492918 . + 0 ID=cds2211;Parent=gene2279;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2493157 2493948 . + . ID=gene2280;Name=DJ40_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11460;old_locus_tag=DJ40_2263 NZ_CP008943.1 Protein Homology CDS 2493157 2493948 . + 0 ID=cds2212;Parent=gene2280;Dbxref=Genbank:WP_038400674.1;Name=WP_038400674.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_038400674.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2494253 2494429 . - . ID=gene2281;Name=DJ40_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11465 NZ_CP008943.1 Protein Homology CDS 2494253 2494429 . - 0 ID=cds2213;Parent=gene2281;Dbxref=Genbank:WP_038401664.1;Name=WP_038401664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401664.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2494740 2495270 . + . ID=gene2282;Name=DJ40_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11470;old_locus_tag=DJ40_2264 NZ_CP008943.1 Protein Homology CDS 2494740 2495270 . + 0 ID=cds2214;Parent=gene2282;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2495334 2496065 . + . ID=gene2283;Name=DJ40_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11475;old_locus_tag=DJ40_2265 NZ_CP008943.1 Protein Homology CDS 2495334 2496065 . + 0 ID=cds2215;Parent=gene2283;Dbxref=Genbank:WP_011191495.1;Name=WP_011191495.1;gbkey=CDS;product=fimbrial chaperone;protein_id=WP_011191495.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2496093 2498744 . + . ID=gene2284;Name=DJ40_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11480;old_locus_tag=DJ40_2266 NZ_CP008943.1 Protein Homology CDS 2496093 2498744 . + 0 ID=cds2216;Parent=gene2284;Dbxref=Genbank:WP_024063541.1;Name=WP_024063541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063541.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2498870 2500147 . + . ID=gene2285;Name=DJ40_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11485;old_locus_tag=DJ40_2267 NZ_CP008943.1 Protein Homology CDS 2498870 2500147 . + 0 ID=cds2217;Parent=gene2285;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2500113 2500931 . + . ID=gene2286;Name=DJ40_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11490;old_locus_tag=DJ40_2268 NZ_CP008943.1 Protein Homology CDS 2500113 2500931 . + 0 ID=cds2218;Parent=gene2286;Dbxref=Genbank:WP_002215825.1;Name=WP_002215825.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002215825.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2500955 2501113 . + . ID=gene2287;Name=DJ40_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11495 NZ_CP008943.1 Protein Homology CDS 2500955 2501113 . + 0 ID=cds2219;Parent=gene2287;Dbxref=Genbank:WP_002212002.1;Name=WP_002212002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212002.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2501570 2501824 . - . ID=gene2288;Name=DJ40_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11500;old_locus_tag=DJ40_2269 NZ_CP008943.1 Protein Homology CDS 2501570 2501824 . - 0 ID=cds2220;Parent=gene2288;Dbxref=Genbank:WP_012104294.1;Name=WP_012104294.1;gbkey=CDS;product=colicin immunity protein E2;protein_id=WP_012104294.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2501826 2502245 . - . ID=gene2289;Name=DJ40_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11505 NZ_CP008943.1 Protein Homology CDS 2501826 2502245 . - 0 ID=cds2221;Parent=gene2289;Dbxref=Genbank:WP_038401669.1;Name=WP_038401669.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_038401669.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2502222 2503223 . - . ID=gene2290;Name=DJ40_RS11510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS11510;partial=true;pseudo=true;start_range=.,2502222 NZ_CP008943.1 Protein Homology CDS 2502222 2503223 . - 0 ID=cds2222;Parent=gene2290;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=colicin;pseudo=true;start_range=.,2502222;transl_table=11 NZ_CP008943.1 RefSeq gene 2503434 2503631 . - . ID=gene2291;Name=DJ40_RS11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS11515;partial=true;pseudo=true;start_range=.,2503434 NZ_CP008943.1 Protein Homology CDS 2503434 2503631 . - 0 ID=cds2223;Parent=gene2291;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=colicin immunity protein;pseudo=true;start_range=.,2503434;transl_table=11 NZ_CP008943.1 RefSeq gene 2503810 2505288 . - . ID=gene2292;Name=DJ40_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11520;old_locus_tag=DJ40_2271 NZ_CP008943.1 Protein Homology CDS 2503810 2505288 . - 0 ID=cds2224;Parent=gene2292;Dbxref=Genbank:WP_011191486.1;Name=WP_011191486.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_011191486.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2505579 2506460 . + . ID=gene2293;Name=DJ40_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11525;old_locus_tag=DJ40_2272 NZ_CP008943.1 Protein Homology CDS 2505579 2506460 . + 0 ID=cds2225;Parent=gene2293;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2506515 2506724 . - . ID=gene2294;Name=DJ40_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11530;old_locus_tag=DJ40_2273 NZ_CP008943.1 Protein Homology CDS 2506515 2506724 . - 0 ID=cds2226;Parent=gene2294;Dbxref=Genbank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2507372 2508250 . + . ID=gene2295;Name=DJ40_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11535;old_locus_tag=DJ40_2274 NZ_CP008943.1 Protein Homology CDS 2507372 2508250 . + 0 ID=cds2227;Parent=gene2295;Dbxref=Genbank:WP_038400676.1;Name=WP_038400676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400676.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2508234 2508695 . + . ID=gene2296;Name=DJ40_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11540;old_locus_tag=DJ40_2275 NZ_CP008943.1 Protein Homology CDS 2508234 2508695 . + 0 ID=cds2228;Parent=gene2296;Dbxref=Genbank:WP_002384511.1;Name=WP_002384511.1;gbkey=CDS;product=membrane protein;protein_id=WP_002384511.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2508775 2509239 . + . ID=gene2297;Name=DJ40_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11545;old_locus_tag=DJ40_2276 NZ_CP008943.1 Protein Homology CDS 2508775 2509239 . + 0 ID=cds2229;Parent=gene2297;Dbxref=Genbank:WP_038400677.1;Name=WP_038400677.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400677.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2509257 2509721 . + . ID=gene2298;Name=DJ40_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11550;old_locus_tag=DJ40_2277 NZ_CP008943.1 Protein Homology CDS 2509257 2509721 . + 0 ID=cds2230;Parent=gene2298;Dbxref=Genbank:WP_011191484.1;Name=WP_011191484.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191484.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2509852 2511396 . - . ID=gene2299;Name=DJ40_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11555;old_locus_tag=DJ40_2278 NZ_CP008943.1 Protein Homology CDS 2509852 2511396 . - 0 ID=cds2231;Parent=gene2299;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2511402 2513252 . - . ID=gene2300;Name=DJ40_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11560;old_locus_tag=DJ40_2279 NZ_CP008943.1 Protein Homology CDS 2511402 2513252 . - 0 ID=cds2232;Parent=gene2300;Dbxref=Genbank:WP_038400678.1;Name=WP_038400678.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_038400678.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2513260 2513457 . - . ID=gene2301;Name=DJ40_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11565 NZ_CP008943.1 GeneMarkS+ CDS 2513260 2513457 . - 0 ID=cds2233;Parent=gene2301;Dbxref=Genbank:WP_038400679.1;Name=WP_038400679.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400679.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2513581 2514507 . - . ID=gene2302;Name=DJ40_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11570;old_locus_tag=DJ40_2280 NZ_CP008943.1 Protein Homology CDS 2513581 2514507 . - 0 ID=cds2234;Parent=gene2302;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2514530 2514787 . - . ID=gene2303;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=DJ40_RS11575;old_locus_tag=DJ40_2281 NZ_CP008943.1 Protein Homology CDS 2514530 2514787 . - 0 ID=cds2235;Parent=gene2303;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2514784 2516430 . - . ID=gene2304;Name=DJ40_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11580;old_locus_tag=DJ40_2282 NZ_CP008943.1 Protein Homology CDS 2514784 2516430 . - 0 ID=cds2236;Parent=gene2304;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2517054 2518577 . + . ID=gene2305;Name=DJ40_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11585;old_locus_tag=DJ40_2283 NZ_CP008943.1 Protein Homology CDS 2517054 2518577 . + 0 ID=cds2237;Parent=gene2305;Dbxref=Genbank:WP_038400681.1;Name=WP_038400681.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_038400681.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2518622 2518928 . + . ID=id158;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2518957 2519295 . - . ID=gene2306;Name=DJ40_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11590;old_locus_tag=DJ40_2284 NZ_CP008943.1 Protein Homology CDS 2518957 2519295 . - 0 ID=cds2238;Parent=gene2306;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2519414 2520295 . + . ID=gene2307;Name=DJ40_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11595;old_locus_tag=DJ40_2286 NZ_CP008943.1 Protein Homology CDS 2519414 2520295 . + 0 ID=cds2239;Parent=gene2307;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2520282 2521274 . - . ID=gene2308;Name=DJ40_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11600;old_locus_tag=DJ40_2285 NZ_CP008943.1 Protein Homology CDS 2520282 2521274 . - 0 ID=cds2240;Parent=gene2308;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2521274 2522272 . - . ID=gene2309;Name=DJ40_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11605;old_locus_tag=DJ40_2287 NZ_CP008943.1 Protein Homology CDS 2521274 2522272 . - 0 ID=cds2241;Parent=gene2309;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2522305 2523795 . - . ID=gene2310;Name=DJ40_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11610;old_locus_tag=DJ40_2288 NZ_CP008943.1 Protein Homology CDS 2522305 2523795 . - 0 ID=cds2242;Parent=gene2310;Dbxref=Genbank:WP_011191480.1;Name=WP_011191480.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011191480.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2523881 2524837 . - . ID=gene2311;Name=DJ40_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11615;old_locus_tag=DJ40_2289 NZ_CP008943.1 Protein Homology CDS 2523881 2524837 . - 0 ID=cds2243;Parent=gene2311;Dbxref=Genbank:WP_002212024.1;Name=WP_002212024.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002212024.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2525478 2525687 . + . ID=gene2312;Name=DJ40_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21895 NZ_CP008943.1 Protein Homology CDS 2525478 2525687 . + 0 ID=cds2244;Parent=gene2312;Dbxref=Genbank:WP_016257685.1;Name=WP_016257685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257685.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2525814 2525889 . - . ID=gene2313;Name=DJ40_RS11620;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11620;old_locus_tag=DJ40_2290 NZ_CP008943.1 tRNAscan-SE tRNA 2525814 2525889 . - . ID=rna59;Parent=gene2313;anticodon=(pos:complement(2525854..2525856));gbkey=tRNA;product=tRNA-Trp NZ_CP008943.1 tRNAscan-SE exon 2525814 2525889 . - . ID=id159;Parent=rna59;anticodon=(pos:complement(2525854..2525856));gbkey=tRNA;product=tRNA-Trp NZ_CP008943.1 RefSeq repeat_region 2525897 2531734 . + . ID=id160;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2525898 2525974 . - . ID=gene2314;Name=DJ40_RS11625;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11625;old_locus_tag=DJ40_2291 NZ_CP008943.1 tRNAscan-SE tRNA 2525898 2525974 . - . ID=rna60;Parent=gene2314;anticodon=(pos:complement(2525938..2525940));gbkey=tRNA;product=tRNA-Asp NZ_CP008943.1 tRNAscan-SE exon 2525898 2525974 . - . ID=id161;Parent=rna60;anticodon=(pos:complement(2525938..2525940));gbkey=tRNA;product=tRNA-Asp NZ_CP008943.1 RefSeq gene 2526100 2526215 . - . ID=gene2315;Name=DJ40_RS11630;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS11630;old_locus_tag=DJ40_2292 NZ_CP008943.1 cmsearch rRNA 2526100 2526215 . - . ID=rna61;Parent=gene2315;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 2526100 2526215 . - . ID=id162;Parent=rna61;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq gene 2526307 2529240 . - . ID=gene2316;Name=DJ40_RS11635;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS11635;old_locus_tag=DJ40_2293 NZ_CP008943.1 RefSeq rRNA 2526307 2529240 . - . ID=rna62;Parent=gene2316;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq exon 2526307 2529240 . - . ID=id163;Parent=rna62;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq gene 2529450 2529525 . - . ID=gene2317;Name=DJ40_RS11640;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11640;old_locus_tag=DJ40_2294 NZ_CP008943.1 tRNAscan-SE tRNA 2529450 2529525 . - . ID=rna63;Parent=gene2317;anticodon=(pos:complement(2529490..2529492));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 tRNAscan-SE exon 2529450 2529525 . - . ID=id164;Parent=rna63;anticodon=(pos:complement(2529490..2529492));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 RefSeq gene 2529577 2529653 . - . ID=gene2318;Name=DJ40_RS11645;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS11645;old_locus_tag=DJ40_2295 NZ_CP008943.1 tRNAscan-SE tRNA 2529577 2529653 . - . ID=rna64;Parent=gene2318;anticodon=(pos:complement(2529617..2529619));gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 tRNAscan-SE exon 2529577 2529653 . - . ID=id165;Parent=rna64;anticodon=(pos:complement(2529617..2529619));gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 RefSeq gene 2529753 2531301 . - . ID=gene2319;Name=DJ40_RS11650;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS11650;old_locus_tag=DJ40_2296 NZ_CP008943.1 RefSeq rRNA 2529753 2531301 . - . ID=rna65;Parent=gene2319;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq exon 2529753 2531301 . - . ID=id166;Parent=rna65;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq gene 2531756 2532619 . - . ID=gene2320;Name=DJ40_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11660;old_locus_tag=DJ40_2297 NZ_CP008943.1 Protein Homology CDS 2531756 2532619 . - 0 ID=cds2245;Parent=gene2320;Dbxref=Genbank:WP_011191478.1;Name=WP_011191478.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_011191478.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2532564 2534438 . - . ID=gene2321;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=DJ40_RS11665;old_locus_tag=DJ40_2298 NZ_CP008943.1 Protein Homology CDS 2532564 2534438 . - 0 ID=cds2246;Parent=gene2321;Dbxref=Genbank:WP_038401674.1;Name=WP_038401674.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12/cobalamin outer membrane transporter;protein_id=WP_038401674.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2534674 2534919 . - . ID=gene2322;Name=DJ40_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11670 NZ_CP008943.1 Protein Homology CDS 2534674 2534919 . - 0 ID=cds2247;Parent=gene2322;Dbxref=Genbank:WP_032465927.1;Name=WP_032465927.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465927.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2534918 2536021 . + . ID=gene2323;Name=DJ40_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11675;old_locus_tag=DJ40_2299 NZ_CP008943.1 Protein Homology CDS 2534918 2536021 . + 0 ID=cds2248;Parent=gene2323;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2536155 2536562 . - . ID=gene2324;Name=DJ40_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11680;old_locus_tag=DJ40_2300 NZ_CP008943.1 Protein Homology CDS 2536155 2536562 . - 0 ID=cds2249;Parent=gene2324;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2536575 2537210 . - . ID=gene2325;Name=DJ40_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11685;old_locus_tag=DJ40_2301 NZ_CP008943.1 Protein Homology CDS 2536575 2537210 . - 0 ID=cds2250;Parent=gene2325;Dbxref=Genbank:WP_038400682.1;Name=WP_038400682.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038400682.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2537428 2538828 . + . ID=gene2326;Name=DJ40_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11690;old_locus_tag=DJ40_2303 NZ_CP008943.1 Protein Homology CDS 2537428 2538828 . + 0 ID=cds2251;Parent=gene2326;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2538811 2539728 . - . ID=gene2327;Name=DJ40_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11695;old_locus_tag=DJ40_2302 NZ_CP008943.1 Protein Homology CDS 2538811 2539728 . - 0 ID=cds2252;Parent=gene2327;Dbxref=Genbank:WP_011191476.1;Name=WP_011191476.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011191476.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2539875 2540606 . + . ID=gene2328;Name=DJ40_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11700;old_locus_tag=DJ40_2304 NZ_CP008943.1 Protein Homology CDS 2539875 2540606 . + 0 ID=cds2253;Parent=gene2328;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2540701 2542164 . + . ID=gene2329;Name=DJ40_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11705;old_locus_tag=DJ40_2305 NZ_CP008943.1 Protein Homology CDS 2540701 2542164 . + 0 ID=cds2254;Parent=gene2329;Dbxref=Genbank:WP_012413409.1;Name=WP_012413409.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_012413409.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2542280 2543083 . - . ID=gene2330;Name=DJ40_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11710;old_locus_tag=DJ40_2306 NZ_CP008943.1 Protein Homology CDS 2542280 2543083 . - 0 ID=cds2255;Parent=gene2330;Dbxref=Genbank:WP_011191474.1;Name=WP_011191474.1;gbkey=CDS;product=transporter TonB;protein_id=WP_011191474.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2543148 2544476 . - . ID=gene2331;Name=DJ40_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11715;old_locus_tag=DJ40_2307 NZ_CP008943.1 Protein Homology CDS 2543148 2544476 . - 0 ID=cds2256;Parent=gene2331;Dbxref=Genbank:WP_011191473.1;Name=WP_011191473.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_011191473.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2544552 2546360 . - . ID=gene2332;Name=DJ40_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11720;old_locus_tag=DJ40_2308 NZ_CP008943.1 Protein Homology CDS 2544552 2546360 . - 0 ID=cds2257;Parent=gene2332;Dbxref=Genbank:WP_038400683.1;Name=WP_038400683.1;gbkey=CDS;product=peptidase;protein_id=WP_038400683.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2546526 2547143 . - . ID=gene2333;Name=DJ40_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11725;old_locus_tag=DJ40_2309 NZ_CP008943.1 Protein Homology CDS 2546526 2547143 . - 0 ID=cds2258;Parent=gene2333;Dbxref=Genbank:WP_012304748.1;Name=WP_012304748.1;gbkey=CDS;product=Heme-binding A family protein;protein_id=WP_012304748.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2547365 2549846 . - . ID=gene2334;Name=DJ40_RS11730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS11730;pseudo=true NZ_CP008943.1 Protein Homology CDS 2547365 2549846 . - 0 ID=cds2259;Parent=gene2334;exception=annotated by transcript or proteomic data;gbkey=CDS;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2550172 2550282 . + . ID=gene2335;Name=DJ40_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11735 NZ_CP008943.1 Protein Homology CDS 2550172 2550282 . + 0 ID=cds2260;Parent=gene2335;Dbxref=Genbank:WP_032465932.1;Name=WP_032465932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465932.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2550445 2551818 . - . ID=gene2336;Name=DJ40_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11740;old_locus_tag=DJ40_2312 NZ_CP008943.1 Protein Homology CDS 2550445 2551818 . - 0 ID=cds2261;Parent=gene2336;Dbxref=Genbank:WP_002209487.1;Name=WP_002209487.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2551985 2552758 . - . ID=gene2337;Name=DJ40_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11745;old_locus_tag=DJ40_2313 NZ_CP008943.1 Protein Homology CDS 2551985 2552758 . - 0 ID=cds2262;Parent=gene2337;Dbxref=Genbank:WP_002209488.1;Name=WP_002209488.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_002209488.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2552941 2553945 . - . ID=gene2338;Name=DJ40_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11750;old_locus_tag=DJ40_2314 NZ_CP008943.1 Protein Homology CDS 2552941 2553945 . - 0 ID=cds2263;Parent=gene2338;Dbxref=Genbank:WP_011191468.1;Name=WP_011191468.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_011191468.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2554196 2555359 . + . ID=gene2339;Name=DJ40_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11755;old_locus_tag=DJ40_2315 NZ_CP008943.1 Protein Homology CDS 2554196 2555359 . + 0 ID=cds2264;Parent=gene2339;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2555733 2558369 . + . ID=gene2340;Name=DJ40_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11760;old_locus_tag=DJ40_2316 NZ_CP008943.1 Protein Homology CDS 2555733 2558369 . + 0 ID=cds2265;Parent=gene2340;Dbxref=Genbank:WP_011191467.1;Name=WP_011191467.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_011191467.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2558790 2559167 . + . ID=id167;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2558975 2559157 . - . ID=gene2341;Name=DJ40_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11765 NZ_CP008943.1 Protein Homology CDS 2558975 2559157 . - 0 ID=cds2266;Parent=gene2341;Dbxref=Genbank:WP_012104280.1;Name=WP_012104280.1;gbkey=CDS;product=transposase;protein_id=WP_012104280.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2559199 2560083 . - . ID=gene2342;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=DJ40_RS11770;old_locus_tag=DJ40_2317 NZ_CP008943.1 Protein Homology CDS 2559199 2560083 . - 0 ID=cds2267;Parent=gene2342;Dbxref=Genbank:WP_002208933.1;Name=WP_002208933.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2560316 2562751 . - . ID=gene2343;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=DJ40_RS11775;old_locus_tag=DJ40_2318 NZ_CP008943.1 Protein Homology CDS 2560316 2562751 . - 0 ID=cds2268;Parent=gene2343;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2562754 2563914 . - . ID=gene2344;Name=DJ40_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11780;old_locus_tag=DJ40_2319 NZ_CP008943.1 Protein Homology CDS 2562754 2563914 . - 0 ID=cds2269;Parent=gene2344;Dbxref=Genbank:WP_038400684.1;Name=WP_038400684.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;product=cystathionine gamma-synthase;protein_id=WP_038400684.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2564292 2564609 . + . ID=gene2345;Name=DJ40_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11785;old_locus_tag=DJ40_2320 NZ_CP008943.1 Protein Homology CDS 2564292 2564609 . + 0 ID=cds2270;Parent=gene2345;Dbxref=Genbank:WP_004392248.1;Name=WP_004392248.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_004392248.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2564746 2564907 . - . ID=gene2346;Name=DJ40_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11790 NZ_CP008943.1 Protein Homology CDS 2564746 2564907 . - 0 ID=cds2271;Parent=gene2346;Dbxref=Genbank:WP_038400685.1;Name=WP_038400685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400685.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2564958 2565413 . + . ID=gene2347;Name=DJ40_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11795;old_locus_tag=DJ40_2321 NZ_CP008943.1 Protein Homology CDS 2564958 2565413 . + 0 ID=cds2272;Parent=gene2347;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2565938 2566153 . - . ID=gene2348;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=DJ40_RS11800;old_locus_tag=DJ40_2322 NZ_CP008943.1 Protein Homology CDS 2565938 2566153 . - 0 ID=cds2273;Parent=gene2348;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2566406 2568604 . + . ID=gene2349;Name=DJ40_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11805;old_locus_tag=DJ40_2323 NZ_CP008943.1 Protein Homology CDS 2566406 2568604 . + 0 ID=cds2274;Parent=gene2349;Dbxref=Genbank:WP_012104279.1;Name=WP_012104279.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_012104279.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2568691 2568834 . + . ID=gene2350;Name=DJ40_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11810;old_locus_tag=DJ40_2324 NZ_CP008943.1 Protein Homology CDS 2568691 2568834 . + 0 ID=cds2275;Parent=gene2350;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2568957 2569985 . + . ID=gene2351;Name=DJ40_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11815;old_locus_tag=DJ40_2325 NZ_CP008943.1 Protein Homology CDS 2568957 2569985 . + 0 ID=cds2276;Parent=gene2351;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2570051 2570896 . + . ID=gene2352;Name=DJ40_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11820;old_locus_tag=DJ40_2326 NZ_CP008943.1 Protein Homology CDS 2570051 2570896 . + 0 ID=cds2277;Parent=gene2352;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2570996 2571520 . + . ID=gene2353;Name=DJ40_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11825;old_locus_tag=DJ40_2327 NZ_CP008943.1 Protein Homology CDS 2570996 2571520 . + 0 ID=cds2278;Parent=gene2353;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2571591 2572922 . + . ID=gene2354;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=DJ40_RS11830;old_locus_tag=DJ40_2328 NZ_CP008943.1 Protein Homology CDS 2571591 2572922 . + 0 ID=cds2279;Parent=gene2354;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2573140 2574057 . + . ID=gene2355;Name=DJ40_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11835;old_locus_tag=DJ40_2329 NZ_CP008943.1 Protein Homology CDS 2573140 2574057 . + 0 ID=cds2280;Parent=gene2355;Dbxref=Genbank:WP_012104277.1;Name=WP_012104277.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_012104277.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2574199 2574684 . + . ID=gene2356;Name=DJ40_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11840;old_locus_tag=DJ40_2330 NZ_CP008943.1 Protein Homology CDS 2574199 2574684 . + 0 ID=cds2281;Parent=gene2356;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=ribonuclease E activity regulator RraA;protein_id=WP_002208945.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2574801 2575385 . - . ID=gene2357;Name=DJ40_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11845;old_locus_tag=DJ40_2331 NZ_CP008943.1 Protein Homology CDS 2574801 2575385 . - 0 ID=cds2282;Parent=gene2357;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2575691 2575840 . - . ID=gene2358;Name=DJ40_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11850 NZ_CP008943.1 Protein Homology CDS 2575691 2575840 . - 0 ID=cds2283;Parent=gene2358;Dbxref=Genbank:WP_038400686.1;Name=WP_038400686.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400686.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2576015 2576254 . - . ID=gene2359;Name=DJ40_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11855;old_locus_tag=DJ40_2332 NZ_CP008943.1 Protein Homology CDS 2576015 2576254 . - 0 ID=cds2284;Parent=gene2359;Dbxref=Genbank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2576467 2577759 . + . ID=gene2360;Name=DJ40_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11860;old_locus_tag=DJ40_2333 NZ_CP008943.1 Protein Homology CDS 2576467 2577759 . + 0 ID=cds2285;Parent=gene2360;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2577752 2579866 . + . ID=gene2361;Name=DJ40_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11865;old_locus_tag=DJ40_2334 NZ_CP008943.1 Protein Homology CDS 2577752 2579866 . + 0 ID=cds2286;Parent=gene2361;Dbxref=Genbank:WP_011191463.1;Name=WP_011191463.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_011191463.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2580193 2580432 . - . ID=gene2362;Name=DJ40_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11870;old_locus_tag=DJ40_2335 NZ_CP008943.1 Protein Homology CDS 2580193 2580432 . - 0 ID=cds2287;Parent=gene2362;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2580669 2580787 . + . ID=id168;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2580891 2581130 . + . ID=gene2363;Name=DJ40_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11875 NZ_CP008943.1 Protein Homology CDS 2580891 2581130 . + 0 ID=cds2288;Parent=gene2363;Dbxref=Genbank:WP_002215868.1;Name=WP_002215868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215868.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2581140 2581988 . + . ID=gene2364;Name=DJ40_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11880;old_locus_tag=DJ40_2336 NZ_CP008943.1 Protein Homology CDS 2581140 2581988 . + 0 ID=cds2289;Parent=gene2364;Dbxref=Genbank:WP_002208954.1;Name=WP_002208954.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_002208954.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2582165 2583688 . + . ID=gene2365;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=DJ40_RS11885;old_locus_tag=DJ40_2337 NZ_CP008943.1 Protein Homology CDS 2582165 2583688 . + 0 ID=cds2290;Parent=gene2365;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2583941 2584951 . + . ID=gene2366;Name=DJ40_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11890;old_locus_tag=DJ40_2338 NZ_CP008943.1 Protein Homology CDS 2583941 2584951 . + 0 ID=cds2291;Parent=gene2366;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2585106 2585852 . + . ID=gene2367;Name=DJ40_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11895;old_locus_tag=DJ40_2339 NZ_CP008943.1 Protein Homology CDS 2585106 2585852 . + 0 ID=cds2292;Parent=gene2367;Dbxref=Genbank:WP_002208956.1;Name=WP_002208956.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_002208956.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2586229 2586663 . - . ID=gene2368;Name=DJ40_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11900 NZ_CP008943.1 Protein Homology CDS 2586229 2586663 . - 0 ID=cds2293;Parent=gene2368;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2586811 2587446 . + . ID=gene2369;Name=DJ40_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11905;old_locus_tag=DJ40_2341 NZ_CP008943.1 Protein Homology CDS 2586811 2587446 . + 0 ID=cds2294;Parent=gene2369;Dbxref=Genbank:WP_002215864.1;Name=WP_002215864.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215864.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2587575 2588342 . + . ID=gene2370;Name=DJ40_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11910;old_locus_tag=DJ40_2342 NZ_CP008943.1 Protein Homology CDS 2587575 2588342 . + 0 ID=cds2295;Parent=gene2370;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2588574 2589809 . - . ID=gene2371;Name=DJ40_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11915;old_locus_tag=DJ40_2343 NZ_CP008943.1 Protein Homology CDS 2588574 2589809 . - 0 ID=cds2296;Parent=gene2371;Dbxref=Genbank:WP_038400689.1;Name=WP_038400689.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_038400689.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2589946 2590683 . + . ID=gene2372;Name=DJ40_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11920;old_locus_tag=DJ40_2344 NZ_CP008943.1 Protein Homology CDS 2589946 2590683 . + 0 ID=cds2297;Parent=gene2372;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2590680 2591393 . + . ID=gene2373;Name=DJ40_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11925;old_locus_tag=DJ40_2345 NZ_CP008943.1 Protein Homology CDS 2590680 2591393 . + 0 ID=cds2298;Parent=gene2373;Dbxref=Genbank:WP_038400690.1;Name=WP_038400690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400690.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2591459 2592886 . + . ID=gene2374;Name=DJ40_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11930;old_locus_tag=DJ40_2346 NZ_CP008943.1 Protein Homology CDS 2591459 2592886 . + 0 ID=cds2299;Parent=gene2374;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2593121 2593780 . + . ID=gene2375;Name=DJ40_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11935;old_locus_tag=DJ40_2347 NZ_CP008943.1 Protein Homology CDS 2593121 2593780 . + 0 ID=cds2300;Parent=gene2375;Dbxref=Genbank:WP_032466594.1;Name=WP_032466594.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_032466594.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2594046 2595035 . - . ID=gene2376;Name=DJ40_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11940;old_locus_tag=DJ40_2348 NZ_CP008943.1 Protein Homology CDS 2594046 2595035 . - 0 ID=cds2301;Parent=gene2376;Dbxref=Genbank:WP_012304757.1;Name=WP_012304757.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_012304757.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2595256 2596239 . - . ID=gene2377;Name=DJ40_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11945;old_locus_tag=DJ40_2349 NZ_CP008943.1 Protein Homology CDS 2595256 2596239 . - 0 ID=cds2302;Parent=gene2377;Dbxref=Genbank:WP_011191458.1;Name=WP_011191458.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_011191458.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2596457 2597359 . - . ID=gene2378;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=DJ40_RS11950;old_locus_tag=DJ40_2350 NZ_CP008943.1 Protein Homology CDS 2596457 2597359 . - 0 ID=cds2303;Parent=gene2378;Dbxref=Genbank:WP_038400692.1;Name=WP_038400692.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=ferrous iron transporter;protein_id=WP_038400692.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2597921 2598880 . - . ID=gene2379;Name=DJ40_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11955;old_locus_tag=DJ40_2351 NZ_CP008943.1 Protein Homology CDS 2597921 2598880 . - 0 ID=cds2304;Parent=gene2379;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2599558 2600046 . - . ID=gene2380;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=DJ40_RS11960;old_locus_tag=DJ40_2352 NZ_CP008943.1 Protein Homology CDS 2599558 2600046 . - 0 ID=cds2305;Parent=gene2380;Dbxref=Genbank:WP_002208969.1;Name=WP_002208969.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_002208969.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2600220 2600918 . + . ID=gene2381;Name=DJ40_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11965;old_locus_tag=DJ40_2353 NZ_CP008943.1 Protein Homology CDS 2600220 2600918 . + 0 ID=cds2306;Parent=gene2381;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2600915 2602291 . + . ID=gene2382;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=DJ40_RS11970;old_locus_tag=DJ40_2354 NZ_CP008943.1 Protein Homology CDS 2600915 2602291 . + 0 ID=cds2307;Parent=gene2382;Dbxref=Genbank:WP_002208971.1;Name=WP_002208971.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_002208971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2602340 2603404 . - . ID=gene2383;Name=DJ40_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11975;old_locus_tag=DJ40_2355 NZ_CP008943.1 Protein Homology CDS 2602340 2603404 . - 0 ID=cds2308;Parent=gene2383;Dbxref=Genbank:WP_012104271.1;Name=WP_012104271.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_012104271.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2603593 2604081 . + . ID=gene2384;Name=DJ40_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11980;old_locus_tag=DJ40_2356 NZ_CP008943.1 Protein Homology CDS 2603593 2604081 . + 0 ID=cds2309;Parent=gene2384;Dbxref=Genbank:WP_002208973.1;Name=WP_002208973.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_002208973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2604204 2605025 . - . ID=gene2385;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=DJ40_RS11985;old_locus_tag=DJ40_2357 NZ_CP008943.1 Protein Homology CDS 2604204 2605025 . - 0 ID=cds2310;Parent=gene2385;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2605091 2605231 . - . ID=gene2386;Name=DJ40_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11990 NZ_CP008943.1 Protein Homology CDS 2605091 2605231 . - 0 ID=cds2311;Parent=gene2386;Dbxref=Genbank:WP_011191454.1;Name=WP_011191454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191454.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2605291 2606310 . - . ID=gene2387;Name=DJ40_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS11995;old_locus_tag=DJ40_2358 NZ_CP008943.1 Protein Homology CDS 2605291 2606310 . - 0 ID=cds2312;Parent=gene2387;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2606310 2606786 . - . ID=gene2388;Name=DJ40_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12000;old_locus_tag=DJ40_2359 NZ_CP008943.1 Protein Homology CDS 2606310 2606786 . - 0 ID=cds2313;Parent=gene2388;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2606874 2607122 . - . ID=gene2389;Name=DJ40_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12005;old_locus_tag=DJ40_2360 NZ_CP008943.1 Protein Homology CDS 2606874 2607122 . - 0 ID=cds2314;Parent=gene2389;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2607241 2607675 . - . ID=gene2390;Name=DJ40_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12010;old_locus_tag=DJ40_2361 NZ_CP008943.1 Protein Homology CDS 2607241 2607675 . - 0 ID=cds2315;Parent=gene2390;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2608072 2609619 . + . ID=gene2391;Name=DJ40_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12015;old_locus_tag=DJ40_2362 NZ_CP008943.1 Protein Homology CDS 2608072 2609619 . + 0 ID=cds2316;Parent=gene2391;Dbxref=Genbank:WP_002208979.1;Name=WP_002208979.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002208979.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2609629 2610999 . + . ID=gene2392;Name=DJ40_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12020;old_locus_tag=DJ40_2363 NZ_CP008943.1 Protein Homology CDS 2609629 2610999 . + 0 ID=cds2317;Parent=gene2392;Dbxref=Genbank:WP_002208980.1;Name=WP_002208980.1;gbkey=CDS;product=peptidase M37;protein_id=WP_002208980.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2611023 2612033 . + . ID=gene2393;Name=DJ40_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12025;old_locus_tag=DJ40_2364 NZ_CP008943.1 Protein Homology CDS 2611023 2612033 . + 0 ID=cds2318;Parent=gene2393;Dbxref=Genbank:WP_011191452.1;Name=WP_011191452.1;gbkey=CDS;product=sugar deacetylase;protein_id=WP_011191452.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2612171 2613196 . - . ID=gene2394;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=DJ40_RS12030;old_locus_tag=DJ40_2365 NZ_CP008943.1 Protein Homology CDS 2612171 2613196 . - 0 ID=cds2319;Parent=gene2394;Dbxref=Genbank:WP_011191451.1;Name=WP_011191451.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_011191451.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2613206 2614417 . - . ID=gene2395;Name=DJ40_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12035;old_locus_tag=DJ40_2366 NZ_CP008943.1 Protein Homology CDS 2613206 2614417 . - 0 ID=cds2320;Parent=gene2395;Dbxref=Genbank:WP_002208982.1;Name=WP_002208982.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_002208982.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2614663 2615595 . + . ID=gene2396;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=DJ40_RS12040;old_locus_tag=DJ40_2367 NZ_CP008943.1 Protein Homology CDS 2614663 2615595 . + 0 ID=cds2321;Parent=gene2396;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2615626 2616690 . + . ID=gene2397;Name=DJ40_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12045;old_locus_tag=DJ40_2368 NZ_CP008943.1 Protein Homology CDS 2615626 2616690 . + 0 ID=cds2322;Parent=gene2397;Dbxref=Genbank:WP_011191450.1;Name=WP_011191450.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_011191450.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2616690 2617655 . + . ID=gene2398;Name=DJ40_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12050;old_locus_tag=DJ40_2369 NZ_CP008943.1 Protein Homology CDS 2616690 2617655 . + 0 ID=cds2323;Parent=gene2398;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2618075 2619352 . + . ID=gene2399;Name=DJ40_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12055;old_locus_tag=DJ40_2370 NZ_CP008943.1 Protein Homology CDS 2618075 2619352 . + 0 ID=cds2324;Parent=gene2399;Dbxref=Genbank:WP_002208986.1;Name=WP_002208986.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2619353 2620135 . + . ID=gene2400;Name=DJ40_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12060;old_locus_tag=DJ40_2371 NZ_CP008943.1 Protein Homology CDS 2619353 2620135 . + 0 ID=cds2325;Parent=gene2400;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2620132 2620611 . + . ID=gene2401;Name=DJ40_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12065;old_locus_tag=DJ40_2372 NZ_CP008943.1 Protein Homology CDS 2620132 2620611 . + 0 ID=cds2326;Parent=gene2401;Dbxref=Genbank:WP_012104267.1;Name=WP_012104267.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_012104267.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2620617 2621426 . - . ID=gene2402;Name=DJ40_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12070;old_locus_tag=DJ40_2373 NZ_CP008943.1 Protein Homology CDS 2620617 2621426 . - 0 ID=cds2327;Parent=gene2402;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2621509 2621676 . - . ID=gene2403;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=DJ40_RS12075;old_locus_tag=DJ40_2374 NZ_CP008943.1 Protein Homology CDS 2621509 2621676 . - 0 ID=cds2328;Parent=gene2403;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2621688 2621924 . - . ID=gene2404;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DJ40_RS12080;old_locus_tag=DJ40_2375 NZ_CP008943.1 Protein Homology CDS 2621688 2621924 . - 0 ID=cds2329;Parent=gene2404;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2622187 2622855 . - . ID=gene2405;Name=DJ40_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12085;old_locus_tag=DJ40_2376 NZ_CP008943.1 Protein Homology CDS 2622187 2622855 . - 0 ID=cds2330;Parent=gene2405;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2623049 2624266 . + . ID=gene2406;Name=DJ40_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12090;old_locus_tag=DJ40_2377 NZ_CP008943.1 Protein Homology CDS 2623049 2624266 . + 0 ID=cds2331;Parent=gene2406;Dbxref=Genbank:WP_002208993.1;Name=WP_002208993.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002208993.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2624244 2624702 . + . ID=gene2407;Name=DJ40_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12095;old_locus_tag=DJ40_2378 NZ_CP008943.1 Protein Homology CDS 2624244 2624702 . + 0 ID=cds2332;Parent=gene2407;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2624824 2625420 . + . ID=gene2408;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=DJ40_RS12100;old_locus_tag=DJ40_2379 NZ_CP008943.1 Protein Homology CDS 2624824 2625420 . + 0 ID=cds2333;Parent=gene2408;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2625555 2626202 . - . ID=gene2409;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=DJ40_RS12105;old_locus_tag=DJ40_2380 NZ_CP008943.1 Protein Homology CDS 2625555 2626202 . - 0 ID=cds2334;Parent=gene2409;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2626369 2627085 . - . ID=gene2410;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=DJ40_RS12110;old_locus_tag=DJ40_2381 NZ_CP008943.1 Protein Homology CDS 2626369 2627085 . - 0 ID=cds2335;Parent=gene2410;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2627212 2628066 . + . ID=gene2411;Name=DJ40_RS12115;end_range=2628066,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS12115;old_locus_tag=DJ40_2382;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 2627212 2628066 . + 0 ID=cds2336;Parent=gene2411;end_range=2628066,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2628476 2629093 . + . ID=gene2412;Name=DJ40_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12120;old_locus_tag=DJ40_2383 NZ_CP008943.1 Protein Homology CDS 2628476 2629093 . + 0 ID=cds2337;Parent=gene2412;Dbxref=Genbank:WP_011191448.1;Name=WP_011191448.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191448.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2629113 2630816 . - . ID=gene2413;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=DJ40_RS12125;old_locus_tag=DJ40_2384 NZ_CP008943.1 Protein Homology CDS 2629113 2630816 . - 0 ID=cds2338;Parent=gene2413;Dbxref=Genbank:WP_002215674.1;Name=WP_002215674.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_002215674.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2631217 2631840 . + . ID=gene2414;Name=DJ40_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12130;old_locus_tag=DJ40_2385 NZ_CP008943.1 Protein Homology CDS 2631217 2631840 . + 0 ID=cds2339;Parent=gene2414;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2631895 2632170 . + . ID=gene2415;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=DJ40_RS12135;old_locus_tag=DJ40_2386 NZ_CP008943.1 Protein Homology CDS 2631895 2632170 . + 0 ID=cds2340;Parent=gene2415;Dbxref=Genbank:WP_004392061.1;Name=WP_004392061.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004392061.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2632190 2634298 . + . ID=gene2416;Name=DJ40_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12140;old_locus_tag=DJ40_2387 NZ_CP008943.1 Protein Homology CDS 2632190 2634298 . + 0 ID=cds2341;Parent=gene2416;Dbxref=Genbank:WP_038400694.1;Name=WP_038400694.1;gbkey=CDS;product=(p)ppGpp synthetase;protein_id=WP_038400694.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2634337 2634996 . + . ID=gene2417;Name=DJ40_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12145;old_locus_tag=DJ40_2388 NZ_CP008943.1 Protein Homology CDS 2634337 2634996 . + 0 ID=cds2342;Parent=gene2417;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2634997 2637078 . + . ID=gene2418;Name=DJ40_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12150;old_locus_tag=DJ40_2389 NZ_CP008943.1 Protein Homology CDS 2634997 2637078 . + 0 ID=cds2343;Parent=gene2418;Dbxref=Genbank:WP_002209004.1;Name=WP_002209004.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2637167 2637346 . + . ID=id169;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2637444 2638658 . - . ID=gene2419;Name=DJ40_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12155;old_locus_tag=DJ40_2390 NZ_CP008943.1 Protein Homology CDS 2637444 2638658 . - 0 ID=cds2344;Parent=gene2419;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2638908 2640293 . + . ID=gene2420;Name=DJ40_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12160;old_locus_tag=DJ40_2391 NZ_CP008943.1 Protein Homology CDS 2638908 2640293 . + 0 ID=cds2345;Parent=gene2420;Dbxref=Genbank:WP_011191446.1;Name=WP_011191446.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease;protein_id=WP_011191446.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2640440 2642149 . + . ID=gene2421;Name=DJ40_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12165;old_locus_tag=DJ40_2392 NZ_CP008943.1 Protein Homology CDS 2640440 2642149 . + 0 ID=cds2346;Parent=gene2421;Dbxref=Genbank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209007.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2642284 2643207 . - . ID=gene2422;Name=DJ40_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12170;old_locus_tag=DJ40_2393 NZ_CP008943.1 Protein Homology CDS 2642284 2643207 . - 0 ID=cds2347;Parent=gene2422;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2643394 2643831 . - . ID=gene2423;Name=DJ40_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12175;old_locus_tag=DJ40_2394 NZ_CP008943.1 Protein Homology CDS 2643394 2643831 . - 0 ID=cds2348;Parent=gene2423;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2643838 2644722 . - . ID=gene2424;Name=DJ40_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12180;old_locus_tag=DJ40_2395 NZ_CP008943.1 Protein Homology CDS 2643838 2644722 . - 0 ID=cds2349;Parent=gene2424;Dbxref=Genbank:WP_011191445.1;Name=WP_011191445.1;gbkey=CDS;product=membrane protein;protein_id=WP_011191445.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2644819 2645409 . - . ID=gene2425;Name=DJ40_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12185;old_locus_tag=DJ40_2396 NZ_CP008943.1 Protein Homology CDS 2644819 2645409 . - 0 ID=cds2350;Parent=gene2425;Dbxref=Genbank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;product=phosphatase;protein_id=WP_002209011.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2645731 2647554 . - . ID=gene2426;Name=DJ40_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12190;old_locus_tag=DJ40_2397 NZ_CP008943.1 Protein Homology CDS 2645731 2647554 . - 0 ID=cds2351;Parent=gene2426;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2647799 2647930 . + . ID=gene2427;Name=DJ40_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12195 NZ_CP008943.1 Protein Homology CDS 2647799 2647930 . + 0 ID=cds2352;Parent=gene2427;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2648116 2649525 . + . ID=gene2428;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=DJ40_RS12200;old_locus_tag=DJ40_2398 NZ_CP008943.1 Protein Homology CDS 2648116 2649525 . + 0 ID=cds2353;Parent=gene2428;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2649778 2650827 . + . ID=gene2429;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=DJ40_RS12205;old_locus_tag=DJ40_2399 NZ_CP008943.1 Protein Homology CDS 2649778 2650827 . + 0 ID=cds2354;Parent=gene2429;Dbxref=Genbank:WP_038400696.1;Name=WP_038400696.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_038400696.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2650835 2652247 . + . ID=gene2430;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=DJ40_RS12210;old_locus_tag=DJ40_2400 NZ_CP008943.1 Protein Homology CDS 2650835 2652247 . + 0 ID=cds2355;Parent=gene2430;Dbxref=Genbank:WP_011191444.1;Name=WP_011191444.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_011191444.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2652301 2653674 . - . ID=gene2431;Name=DJ40_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12215;old_locus_tag=DJ40_2401 NZ_CP008943.1 Protein Homology CDS 2652301 2653674 . - 0 ID=cds2356;Parent=gene2431;Dbxref=Genbank:WP_002213155.1;Name=WP_002213155.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2653857 2654423 . - . ID=gene2432;Name=DJ40_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12220;old_locus_tag=DJ40_2402 NZ_CP008943.1 Protein Homology CDS 2653857 2654423 . - 0 ID=cds2357;Parent=gene2432;Dbxref=Genbank:WP_012304783.1;Name=WP_012304783.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_012304783.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2654540 2654758 . - . ID=gene2433;Name=DJ40_RS12225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS12225;partial=true;pseudo=true;start_range=.,2654540 NZ_CP008943.1 Protein Homology CDS 2654540 2654758 . - 0 ID=cds2358;Parent=gene2433;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2654540;transl_table=11 NZ_CP008943.1 RefSeq gene 2655167 2655817 . + . ID=gene2434;Name=DJ40_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12230;old_locus_tag=DJ40_2403 NZ_CP008943.1 Protein Homology CDS 2655167 2655817 . + 0 ID=cds2359;Parent=gene2434;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2656225 2659023 . - . ID=gene2435;Name=DJ40_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12235;old_locus_tag=DJ40_2404 NZ_CP008943.1 Protein Homology CDS 2656225 2659023 . - 0 ID=cds2360;Parent=gene2435;Dbxref=Genbank:WP_038400697.1;Name=WP_038400697.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_038400697.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2659514 2660137 . - . ID=gene2436;Name=DJ40_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12240;old_locus_tag=DJ40_2405 NZ_CP008943.1 Protein Homology CDS 2659514 2660137 . - 0 ID=cds2361;Parent=gene2436;Dbxref=Genbank:WP_002213168.1;Name=WP_002213168.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2660165 2661151 . - . ID=gene2437;Name=DJ40_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12245;old_locus_tag=DJ40_2406 NZ_CP008943.1 Protein Homology CDS 2660165 2661151 . - 0 ID=cds2362;Parent=gene2437;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2661242 2661511 . - . ID=gene2438;Name=DJ40_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12250;old_locus_tag=DJ40_2407 NZ_CP008943.1 Protein Homology CDS 2661242 2661511 . - 0 ID=cds2363;Parent=gene2438;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2661665 2662252 . + . ID=gene2439;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=DJ40_RS12255;old_locus_tag=DJ40_2408 NZ_CP008943.1 Protein Homology CDS 2661665 2662252 . + 0 ID=cds2364;Parent=gene2439;Dbxref=Genbank:WP_038400699.1;Name=WP_038400699.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdenum cofactor guanylyltransferase;protein_id=WP_038400699.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2662252 2662782 . + . ID=gene2440;Name=DJ40_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12260;old_locus_tag=DJ40_2409 NZ_CP008943.1 Protein Homology CDS 2662252 2662782 . + 0 ID=cds2365;Parent=gene2440;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2662805 2664119 . + . ID=id170;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2662840 2664048 . - . ID=gene2441;Name=DJ40_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12265;old_locus_tag=DJ40_2410 NZ_CP008943.1 Protein Homology CDS 2662840 2664048 . - 0 ID=cds2366;Parent=gene2441;Dbxref=Genbank:WP_012304013.1;Name=WP_012304013.1;gbkey=CDS;product=transposase;protein_id=WP_012304013.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2664170 2664400 . - . ID=gene2442;Name=DJ40_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21900 NZ_CP008943.1 Protein Homology CDS 2664170 2664400 . - 0 ID=cds2367;Parent=gene2442;Dbxref=Genbank:WP_049772374.1;Name=WP_049772374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049772374.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2664299 2670136 . + . ID=id171;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2664551 2664666 . - . ID=gene2443;Name=DJ40_RS12270;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS12270;old_locus_tag=DJ40_2411 NZ_CP008943.1 cmsearch rRNA 2664551 2664666 . - . ID=rna66;Parent=gene2443;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 2664551 2664666 . - . ID=id172;Parent=rna66;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq gene 2664759 2667692 . - . ID=gene2444;Name=DJ40_RS12275;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS12275;old_locus_tag=DJ40_2412 NZ_CP008943.1 RefSeq rRNA 2664759 2667692 . - . ID=rna67;Parent=gene2444;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq exon 2664759 2667692 . - . ID=id173;Parent=rna67;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq gene 2667935 2668010 . - . ID=gene2445;Name=DJ40_RS12280;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS12280;old_locus_tag=DJ40_2413 NZ_CP008943.1 tRNAscan-SE tRNA 2667935 2668010 . - . ID=rna68;Parent=gene2445;anticodon=(pos:complement(2667974..2667976));gbkey=tRNA;product=tRNA-Glu NZ_CP008943.1 tRNAscan-SE exon 2667935 2668010 . - . ID=id174;Parent=rna68;anticodon=(pos:complement(2667974..2667976));gbkey=tRNA;product=tRNA-Glu NZ_CP008943.1 RefSeq gene 2668144 2669691 . - . ID=gene2446;Name=DJ40_RS12285;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS12285;old_locus_tag=DJ40_2414 NZ_CP008943.1 RefSeq rRNA 2668144 2669691 . - . ID=rna69;Parent=gene2446;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq exon 2668144 2669691 . - . ID=id175;Parent=rna69;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq gene 2670247 2670936 . + . ID=gene2447;Name=DJ40_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12290;old_locus_tag=DJ40_2416 NZ_CP008943.1 Protein Homology CDS 2670247 2670936 . + 0 ID=cds2368;Parent=gene2447;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2671016 2672440 . + . ID=gene2448;Name=DJ40_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12295;old_locus_tag=DJ40_2418 NZ_CP008943.1 Protein Homology CDS 2671016 2672440 . + 0 ID=cds2369;Parent=gene2448;Dbxref=Genbank:WP_038400700.1;Name=WP_038400700.1;gbkey=CDS;product=MFS transporter;protein_id=WP_038400700.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2672437 2672607 . - . ID=gene2449;Name=DJ40_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12300;old_locus_tag=DJ40_2417 NZ_CP008943.1 Protein Homology CDS 2672437 2672607 . - 0 ID=cds2370;Parent=gene2449;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2672660 2673586 . - . ID=gene2450;Name=DJ40_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12305;old_locus_tag=DJ40_2419 NZ_CP008943.1 Protein Homology CDS 2672660 2673586 . - 0 ID=cds2371;Parent=gene2450;Dbxref=Genbank:WP_002212251.1;Name=WP_002212251.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2673637 2674056 . - . ID=gene2451;Name=DJ40_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12310;old_locus_tag=DJ40_2420 NZ_CP008943.1 Protein Homology CDS 2673637 2674056 . - 0 ID=cds2372;Parent=gene2451;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2674261 2676129 . - . ID=gene2452;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=DJ40_RS12315;old_locus_tag=DJ40_2421 NZ_CP008943.1 Protein Homology CDS 2674261 2676129 . - 0 ID=cds2373;Parent=gene2452;Dbxref=Genbank:WP_011191440.1;Name=WP_011191440.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_011191440.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2676403 2677926 . + . ID=gene2453;Name=DJ40_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12320;old_locus_tag=DJ40_2422 NZ_CP008943.1 Protein Homology CDS 2676403 2677926 . + 0 ID=cds2374;Parent=gene2453;Dbxref=Genbank:WP_038400701.1;Name=WP_038400701.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase;protein_id=WP_038400701.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2677930 2679396 . + . ID=gene2454;Name=DJ40_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12325;old_locus_tag=DJ40_2423 NZ_CP008943.1 Protein Homology CDS 2677930 2679396 . + 0 ID=cds2375;Parent=gene2454;Dbxref=Genbank:WP_038400703.1;Name=WP_038400703.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400703.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2679495 2680487 . - . ID=gene2455;Name=DJ40_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12330;old_locus_tag=DJ40_2424 NZ_CP008943.1 Protein Homology CDS 2679495 2680487 . - 0 ID=cds2376;Parent=gene2455;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2680657 2681118 . + . ID=gene2456;Name=DJ40_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12335;old_locus_tag=DJ40_2425 NZ_CP008943.1 Protein Homology CDS 2680657 2681118 . + 0 ID=cds2377;Parent=gene2456;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2681211 2681651 . + . ID=gene2457;Name=DJ40_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12340;old_locus_tag=DJ40_2426 NZ_CP008943.1 Protein Homology CDS 2681211 2681651 . + 0 ID=cds2378;Parent=gene2457;Dbxref=Genbank:WP_038400704.1;Name=WP_038400704.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_038400704.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2682032 2683921 . + . ID=gene2458;Name=DJ40_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12345;old_locus_tag=DJ40_2427 NZ_CP008943.1 Protein Homology CDS 2682032 2683921 . + 0 ID=cds2379;Parent=gene2458;Dbxref=Genbank:WP_002212259.1;Name=WP_002212259.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2684067 2684687 . + . ID=gene2459;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=DJ40_RS12350;old_locus_tag=DJ40_2428 NZ_CP008943.1 Protein Homology CDS 2684067 2684687 . + 0 ID=cds2380;Parent=gene2459;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2685354 2685737 . + . ID=gene2460;Name=DJ40_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12355;old_locus_tag=DJ40_2429 NZ_CP008943.1 Protein Homology CDS 2685354 2685737 . + 0 ID=cds2381;Parent=gene2460;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2685777 2686601 . + . ID=gene2461;Name=DJ40_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12360;old_locus_tag=DJ40_2430 NZ_CP008943.1 Protein Homology CDS 2685777 2686601 . + 0 ID=cds2382;Parent=gene2461;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2686651 2686890 . + . ID=gene2462;Name=DJ40_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12365;old_locus_tag=DJ40_2431 NZ_CP008943.1 Protein Homology CDS 2686651 2686890 . + 0 ID=cds2383;Parent=gene2462;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2686952 2687422 . + . ID=gene2463;Name=DJ40_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12370;old_locus_tag=DJ40_2432 NZ_CP008943.1 Protein Homology CDS 2686952 2687422 . + 0 ID=cds2384;Parent=gene2463;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2687437 2687970 . + . ID=gene2464;Name=DJ40_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12375;old_locus_tag=DJ40_2433 NZ_CP008943.1 Protein Homology CDS 2687437 2687970 . + 0 ID=cds2385;Parent=gene2464;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2687985 2689526 . + . ID=gene2465;Name=DJ40_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12380;old_locus_tag=DJ40_2434 NZ_CP008943.1 Protein Homology CDS 2687985 2689526 . + 0 ID=cds2386;Parent=gene2465;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2689588 2690451 . + . ID=gene2466;Name=DJ40_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12385;old_locus_tag=DJ40_2435 NZ_CP008943.1 Protein Homology CDS 2689588 2690451 . + 0 ID=cds2387;Parent=gene2466;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2690607 2691989 . + . ID=gene2467;Name=DJ40_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12390;old_locus_tag=DJ40_2436 NZ_CP008943.1 Protein Homology CDS 2690607 2691989 . + 0 ID=cds2388;Parent=gene2467;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2692011 2692433 . + . ID=gene2468;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=DJ40_RS12395;old_locus_tag=DJ40_2437 NZ_CP008943.1 Protein Homology CDS 2692011 2692433 . + 0 ID=cds2389;Parent=gene2468;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2693054 2694424 . + . ID=gene2469;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=DJ40_RS12400;old_locus_tag=DJ40_2438 NZ_CP008943.1 Protein Homology CDS 2693054 2694424 . + 0 ID=cds2390;Parent=gene2469;Dbxref=Genbank:WP_038400706.1;Name=WP_038400706.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=WP_038400706.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2694625 2696454 . + . ID=gene2470;Name=DJ40_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12405;old_locus_tag=DJ40_2439 NZ_CP008943.1 Protein Homology CDS 2694625 2696454 . + 0 ID=cds2391;Parent=gene2470;Dbxref=Genbank:WP_002215552.1;Name=WP_002215552.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_002215552.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2696937 2697977 . + . ID=gene2471;Name=DJ40_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12410;old_locus_tag=DJ40_2441 NZ_CP008943.1 Protein Homology CDS 2696937 2697977 . + 0 ID=cds2392;Parent=gene2471;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2698206 2699162 . + . ID=gene2472;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=DJ40_RS12415;old_locus_tag=DJ40_2442 NZ_CP008943.1 Protein Homology CDS 2698206 2699162 . + 0 ID=cds2393;Parent=gene2472;Dbxref=Genbank:WP_002215558.1;Name=WP_002215558.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002215558.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2699164 2700051 . + . ID=gene2473;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=DJ40_RS12420;old_locus_tag=DJ40_2443 NZ_CP008943.1 Protein Homology CDS 2699164 2700051 . + 0 ID=cds2394;Parent=gene2473;Dbxref=Genbank:WP_012105988.1;Name=WP_012105988.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_012105988.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2700132 2700908 . + . ID=gene2474;Name=DJ40_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12425;old_locus_tag=DJ40_2444 NZ_CP008943.1 Protein Homology CDS 2700132 2700908 . + 0 ID=cds2395;Parent=gene2474;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2700996 2701718 . + . ID=gene2475;Name=DJ40_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12430;old_locus_tag=DJ40_2445 NZ_CP008943.1 Protein Homology CDS 2700996 2701718 . + 0 ID=cds2396;Parent=gene2475;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2702014 2702685 . + . ID=gene2476;Name=DJ40_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12435;old_locus_tag=DJ40_2446 NZ_CP008943.1 Protein Homology CDS 2702014 2702685 . + 0 ID=cds2397;Parent=gene2476;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2702905 2703759 . + . ID=gene2477;Name=DJ40_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12440;old_locus_tag=DJ40_2447 NZ_CP008943.1 Protein Homology CDS 2702905 2703759 . + 0 ID=cds2398;Parent=gene2477;Dbxref=Genbank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2703942 2704679 . + . ID=gene2478;Name=DJ40_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12445;old_locus_tag=DJ40_2448 NZ_CP008943.1 Protein Homology CDS 2703942 2704679 . + 0 ID=cds2399;Parent=gene2478;Dbxref=Genbank:WP_002215571.1;Name=WP_002215571.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215571.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2704681 2705436 . + . ID=gene2479;Name=DJ40_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12450;old_locus_tag=DJ40_2449 NZ_CP008943.1 Protein Homology CDS 2704681 2705436 . + 0 ID=cds2400;Parent=gene2479;Dbxref=Genbank:WP_012105985.1;Name=WP_012105985.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_012105985.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2705471 2706139 . - . ID=gene2480;Name=DJ40_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12455;old_locus_tag=DJ40_2450 NZ_CP008943.1 Protein Homology CDS 2705471 2706139 . - 0 ID=cds2401;Parent=gene2480;Dbxref=Genbank:WP_011193354.1;Name=WP_011193354.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_011193354.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2706241 2706413 . + . ID=id176;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2706632 2707960 . + . ID=gene2481;Name=DJ40_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12460;old_locus_tag=DJ40_2451 NZ_CP008943.1 Protein Homology CDS 2706632 2707960 . + 0 ID=cds2402;Parent=gene2481;Dbxref=Genbank:WP_002215577.1;Name=WP_002215577.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_002215577.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2708505 2709125 . + . ID=gene2482;Name=DJ40_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12465;old_locus_tag=DJ40_2452 NZ_CP008943.1 Protein Homology CDS 2708505 2709125 . + 0 ID=cds2403;Parent=gene2482;Dbxref=Genbank:WP_038400708.1;Name=WP_038400708.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400708.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2709187 2709468 . + . ID=gene2483;Name=DJ40_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12470;old_locus_tag=DJ40_2453 NZ_CP008943.1 Protein Homology CDS 2709187 2709468 . + 0 ID=cds2404;Parent=gene2483;Dbxref=Genbank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215583.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2709936 2711135 . - . ID=gene2484;Name=DJ40_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12475;old_locus_tag=DJ40_2454 NZ_CP008943.1 Protein Homology CDS 2709936 2711135 . - 0 ID=cds2405;Parent=gene2484;Dbxref=Genbank:WP_038400709.1;Name=WP_038400709.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_038400709.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2711342 2712706 . - . ID=gene2485;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=DJ40_RS12480;old_locus_tag=DJ40_2455 NZ_CP008943.1 Protein Homology CDS 2711342 2712706 . - 0 ID=cds2406;Parent=gene2485;Dbxref=Genbank:WP_038400710.1;Name=WP_038400710.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=WP_038400710.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2712849 2714489 . - . ID=gene2486;Name=DJ40_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12485;old_locus_tag=DJ40_2456 NZ_CP008943.1 Protein Homology CDS 2712849 2714489 . - 0 ID=cds2407;Parent=gene2486;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2714713 2715072 . - . ID=gene2487;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=DJ40_RS12490;old_locus_tag=DJ40_2458 NZ_CP008943.1 Protein Homology CDS 2714713 2715072 . - 0 ID=cds2408;Parent=gene2487;Dbxref=Genbank:WP_038400712.1;Name=WP_038400712.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_038400712.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2715091 2715231 . - . ID=gene2488;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=DJ40_RS12495;old_locus_tag=DJ40_2459 NZ_CP008943.1 Protein Homology CDS 2715091 2715231 . - 0 ID=cds2409;Parent=gene2488;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2715947 2717335 . + . ID=gene2489;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=DJ40_RS12500;old_locus_tag=DJ40_2461 NZ_CP008943.1 Protein Homology CDS 2715947 2717335 . + 0 ID=cds2410;Parent=gene2489;Dbxref=Genbank:WP_002220732.1;Name=WP_002220732.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2717340 2718440 . + . ID=gene2490;Name=DJ40_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12505;old_locus_tag=DJ40_2462 NZ_CP008943.1 Protein Homology CDS 2717340 2718440 . + 0 ID=cds2411;Parent=gene2490;Dbxref=Genbank:WP_038400713.1;Name=WP_038400713.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_038400713.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2718444 2718614 . - . ID=gene2491;Name=DJ40_RS12510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS12510;pseudo=true NZ_CP008943.1 Protein Homology CDS 2718444 2718614 . - 0 ID=cds2412;Parent=gene2491;gbkey=CDS;product=recombinase RecF;pseudo=true;transl_except=(pos:complement(2718522..2718524)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 2718613 2719698 . + . ID=gene2492;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=DJ40_RS12515;old_locus_tag=DJ40_2463 NZ_CP008943.1 Protein Homology CDS 2718613 2719698 . + 0 ID=cds2413;Parent=gene2492;Dbxref=Genbank:WP_002209643.1;Name=WP_002209643.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_002209643.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2719718 2722132 . + . ID=gene2493;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=DJ40_RS12520;old_locus_tag=DJ40_2464 NZ_CP008943.1 Protein Homology CDS 2719718 2722132 . + 0 ID=cds2414;Parent=gene2493;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2722348 2723157 . + . ID=gene2494;Name=DJ40_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12525;old_locus_tag=DJ40_2465 NZ_CP008943.1 Protein Homology CDS 2722348 2723157 . + 0 ID=cds2415;Parent=gene2494;Dbxref=Genbank:WP_011193349.1;Name=WP_011193349.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_011193349.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2723302 2723622 . + . ID=id177;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2723431 2723697 . - . ID=gene2495;Name=DJ40_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12530;old_locus_tag=DJ40_2466 NZ_CP008943.1 Protein Homology CDS 2723431 2723697 . - 0 ID=cds2416;Parent=gene2495;Dbxref=Genbank:WP_038400715.1;Name=WP_038400715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400715.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2723717 2724670 . - . ID=gene2496;Name=DJ40_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12535;old_locus_tag=DJ40_2467 NZ_CP008943.1 Protein Homology CDS 2723717 2724670 . - 0 ID=cds2417;Parent=gene2496;Dbxref=Genbank:WP_011193327.1;Name=WP_011193327.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_011193327.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2724664 2725626 . - . ID=gene2497;Name=DJ40_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12540;old_locus_tag=DJ40_2468 NZ_CP008943.1 Protein Homology CDS 2724664 2725626 . - 0 ID=cds2418;Parent=gene2497;Dbxref=Genbank:WP_002209638.1;Name=WP_002209638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209638.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2725834 2726145 . + . ID=gene2498;Name=DJ40_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12545;old_locus_tag=DJ40_2469 NZ_CP008943.1 Protein Homology CDS 2725834 2726145 . + 0 ID=cds2419;Parent=gene2498;Dbxref=Genbank:WP_002228734.1;Name=WP_002228734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228734.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2726135 2726449 . + . ID=gene2499;Name=DJ40_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12550;old_locus_tag=DJ40_2470 NZ_CP008943.1 Protein Homology CDS 2726135 2726449 . + 0 ID=cds2420;Parent=gene2499;Dbxref=Genbank:WP_002228733.1;Name=WP_002228733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228733.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2726489 2726827 . - . ID=gene2500;Name=DJ40_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12555;old_locus_tag=DJ40_2471 NZ_CP008943.1 Protein Homology CDS 2726489 2726827 . - 0 ID=cds2421;Parent=gene2500;Dbxref=Genbank:WP_012303315.1;Name=WP_012303315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303315.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2727195 2727608 . + . ID=gene2501;Name=DJ40_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12560;old_locus_tag=DJ40_2472 NZ_CP008943.1 Protein Homology CDS 2727195 2727608 . + 0 ID=cds2422;Parent=gene2501;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2727889 2728353 . + . ID=gene2502;Name=DJ40_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12565;old_locus_tag=DJ40_2473 NZ_CP008943.1 Protein Homology CDS 2727889 2728353 . + 0 ID=cds2423;Parent=gene2502;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2728726 2730384 . + . ID=gene2503;Name=DJ40_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12570;old_locus_tag=DJ40_2474 NZ_CP008943.1 Protein Homology CDS 2728726 2730384 . + 0 ID=cds2424;Parent=gene2503;Dbxref=Genbank:WP_038400717.1;Name=WP_038400717.1;gbkey=CDS;product=transporter;protein_id=WP_038400717.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2730497 2731762 . - . ID=gene2504;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=DJ40_RS12575;old_locus_tag=DJ40_2475 NZ_CP008943.1 Protein Homology CDS 2730497 2731762 . - 0 ID=cds2425;Parent=gene2504;Dbxref=Genbank:WP_038401683.1;Name=WP_038401683.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_038401683.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2731941 2732243 . - . ID=gene2505;Name=DJ40_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12580;old_locus_tag=DJ40_2476 NZ_CP008943.1 Protein Homology CDS 2731941 2732243 . - 0 ID=cds2426;Parent=gene2505;Dbxref=Genbank:WP_033851015.1;Name=WP_033851015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033851015.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2732218 2732661 . - . ID=gene2506;Name=DJ40_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12585;old_locus_tag=DJ40_2477 NZ_CP008943.1 Protein Homology CDS 2732218 2732661 . - 0 ID=cds2427;Parent=gene2506;Dbxref=Genbank:WP_038400718.1;Name=WP_038400718.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400718.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2732661 2733248 . - . ID=gene2507;Name=DJ40_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12590;old_locus_tag=DJ40_2478 NZ_CP008943.1 Protein Homology CDS 2732661 2733248 . - 0 ID=cds2428;Parent=gene2507;Dbxref=Genbank:WP_038400719.1;Name=WP_038400719.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400719.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2734265 2736328 . - . ID=gene2508;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=DJ40_RS12595;old_locus_tag=DJ40_2479 NZ_CP008943.1 Protein Homology CDS 2734265 2736328 . - 0 ID=cds2429;Parent=gene2508;Dbxref=Genbank:WP_012303318.1;Name=WP_012303318.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_012303318.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2736598 2737578 . - . ID=gene2509;Name=DJ40_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12600;old_locus_tag=DJ40_2480 NZ_CP008943.1 Protein Homology CDS 2736598 2737578 . - 0 ID=cds2430;Parent=gene2509;Dbxref=Genbank:WP_012303319.1;Name=WP_012303319.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_012303319.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2738133 2738777 . + . ID=gene2510;Name=DJ40_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12605;old_locus_tag=DJ40_2481 NZ_CP008943.1 Protein Homology CDS 2738133 2738777 . + 0 ID=cds2431;Parent=gene2510;Dbxref=Genbank:WP_002209629.1;Name=WP_002209629.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209629.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2738908 2739567 . - . ID=gene2511;Name=DJ40_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12610;old_locus_tag=DJ40_2482 NZ_CP008943.1 Protein Homology CDS 2738908 2739567 . - 0 ID=cds2432;Parent=gene2511;Dbxref=Genbank:WP_038400720.1;Name=WP_038400720.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400720.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2739925 2740380 . - . ID=gene2512;Name=DJ40_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12615;old_locus_tag=DJ40_2483 NZ_CP008943.1 Protein Homology CDS 2739925 2740380 . - 0 ID=cds2433;Parent=gene2512;Dbxref=Genbank:WP_033851021.1;Name=WP_033851021.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_033851021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2740377 2740949 . - . ID=gene2513;Name=DJ40_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12620;old_locus_tag=DJ40_2484 NZ_CP008943.1 Protein Homology CDS 2740377 2740949 . - 0 ID=cds2434;Parent=gene2513;Dbxref=Genbank:WP_002209626.1;Name=WP_002209626.1;gbkey=CDS;product=DNA-3-methyladenine glycosylase;protein_id=WP_002209626.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2741296 2742210 . + . ID=gene2514;Name=DJ40_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12625;old_locus_tag=DJ40_2485 NZ_CP008943.1 Protein Homology CDS 2741296 2742210 . + 0 ID=cds2435;Parent=gene2514;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2742220 2744289 . + . ID=gene2515;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=DJ40_RS12630;old_locus_tag=DJ40_2486 NZ_CP008943.1 Protein Homology CDS 2742220 2744289 . + 0 ID=cds2436;Parent=gene2515;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2744336 2744510 . + . ID=id178;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2744761 2745480 . + . ID=gene2516;Name=DJ40_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12635;old_locus_tag=DJ40_2487 NZ_CP008943.1 Protein Homology CDS 2744761 2745480 . + 0 ID=cds2437;Parent=gene2516;Dbxref=Genbank:WP_012105968.1;Name=WP_012105968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105968.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2745514 2745688 . + . ID=id179;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2746130 2748061 . + . ID=gene2517;Name=DJ40_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12640;old_locus_tag=DJ40_2488 NZ_CP008943.1 Protein Homology CDS 2746130 2748061 . + 0 ID=cds2438;Parent=gene2517;Dbxref=Genbank:WP_002209621.1;Name=WP_002209621.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannitol transporter subunit IIABC;protein_id=WP_002209621.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2748198 2749361 . + . ID=gene2518;Name=DJ40_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12645;old_locus_tag=DJ40_2489 NZ_CP008943.1 Protein Homology CDS 2748198 2749361 . + 0 ID=cds2439;Parent=gene2518;Dbxref=Genbank:WP_002209620.1;Name=WP_002209620.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_002209620.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2749568 2750122 . + . ID=gene2519;Name=DJ40_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12650;old_locus_tag=DJ40_2490 NZ_CP008943.1 Protein Homology CDS 2749568 2750122 . + 0 ID=cds2440;Parent=gene2519;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2750371 2750727 . + . ID=gene2520;Name=DJ40_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12655;old_locus_tag=DJ40_2492 NZ_CP008943.1 Protein Homology CDS 2750371 2750727 . + 0 ID=cds2441;Parent=gene2520;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2750890 2751366 . - . ID=gene2521;Name=DJ40_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12660;old_locus_tag=DJ40_2493 NZ_CP008943.1 Protein Homology CDS 2750890 2751366 . - 0 ID=cds2442;Parent=gene2521;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2751898 2752281 . - . ID=gene2522;Name=DJ40_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12665;old_locus_tag=DJ40_2494 NZ_CP008943.1 Protein Homology CDS 2751898 2752281 . - 0 ID=cds2443;Parent=gene2522;Dbxref=Genbank:WP_012105966.1;Name=WP_012105966.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2752419 2754368 . - . ID=gene2523;Name=DJ40_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12670;old_locus_tag=DJ40_2495 NZ_CP008943.1 Protein Homology CDS 2752419 2754368 . - 0 ID=cds2444;Parent=gene2523;Dbxref=Genbank:WP_011193340.1;Name=WP_011193340.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_011193340.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2754712 2755335 . - . ID=gene2524;Name=DJ40_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12675;old_locus_tag=DJ40_2496 NZ_CP008943.1 Protein Homology CDS 2754712 2755335 . - 0 ID=cds2445;Parent=gene2524;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2755770 2756594 . - . ID=gene2525;Name=DJ40_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12680;old_locus_tag=DJ40_2497 NZ_CP008943.1 Protein Homology CDS 2755770 2756594 . - 0 ID=cds2446;Parent=gene2525;Dbxref=Genbank:WP_012303325.1;Name=WP_012303325.1;gbkey=CDS;product=protein FdhD;protein_id=WP_012303325.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2756791 2757378 . + . ID=gene2526;Name=DJ40_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12685;old_locus_tag=DJ40_2498 NZ_CP008943.1 Protein Homology CDS 2756791 2757378 . + 0 ID=cds2447;Parent=gene2526;Dbxref=Genbank:WP_002231685.1;Name=WP_002231685.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002231685.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2757427 2759838 . + . ID=gene2527;Name=DJ40_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12690;old_locus_tag=DJ40_2499 NZ_CP008943.1 Protein Homology CDS 2757427 2759838 . + 0 ID=cds2448;Parent=gene2527;Dbxref=Genbank:WP_038400721.1;Name=WP_038400721.1;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_038400721.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2759851 2760822 . + . ID=gene2528;Name=DJ40_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12695;old_locus_tag=DJ40_2500 NZ_CP008943.1 Protein Homology CDS 2759851 2760822 . + 0 ID=cds2449;Parent=gene2528;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2760819 2761493 . + . ID=gene2529;Name=DJ40_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12700;old_locus_tag=DJ40_2501 NZ_CP008943.1 Protein Homology CDS 2760819 2761493 . + 0 ID=cds2450;Parent=gene2529;Dbxref=Genbank:WP_002209610.1;Name=WP_002209610.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_002209610.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2761493 2762422 . + . ID=gene2530;Name=DJ40_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12705;old_locus_tag=DJ40_2502 NZ_CP008943.1 Protein Homology CDS 2761493 2762422 . + 0 ID=cds2451;Parent=gene2530;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2762606 2763994 . + . ID=gene2531;Name=DJ40_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12710;old_locus_tag=DJ40_2503 NZ_CP008943.1 Protein Homology CDS 2762606 2763994 . + 0 ID=cds2452;Parent=gene2531;Dbxref=Genbank:WP_011193344.1;Name=WP_011193344.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_011193344.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2763991 2765964 . + . ID=gene2532;Name=DJ40_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12715;old_locus_tag=DJ40_2504 NZ_CP008943.1 Protein Homology CDS 2763991 2765964 . + 0 ID=cds2453;Parent=gene2532;Dbxref=Genbank:WP_038400722.1;Name=WP_038400722.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_038400722.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2765971 2766434 . - . ID=gene2533;Name=DJ40_RS12720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS12720;pseudo=true NZ_CP008943.1 Protein Homology CDS 2765971 2766434 . - 0 ID=cds2454;Parent=gene2533;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2766723 2767056 . + . ID=gene2534;Name=DJ40_RS12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS12725;pseudo=true NZ_CP008943.1 Protein Homology CDS 2766723 2767056 . + 0 ID=cds2455;Parent=gene2534;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2767070 2767640 . - . ID=gene2535;Name=DJ40_RS12730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS12730;pseudo=true NZ_CP008943.1 Protein Homology CDS 2767070 2767640 . - 0 ID=cds2456;Parent=gene2535;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2767719 2767877 . - . ID=gene2536;Name=DJ40_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12735;old_locus_tag=DJ40_2506 NZ_CP008943.1 Protein Homology CDS 2767719 2767877 . - 0 ID=cds2457;Parent=gene2536;Dbxref=Genbank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2767998 2768201 . + . ID=gene2537;Name=DJ40_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12740;old_locus_tag=DJ40_2507 NZ_CP008943.1 Protein Homology CDS 2767998 2768201 . + 0 ID=cds2458;Parent=gene2537;Dbxref=Genbank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2768350 2769579 . - . ID=gene2538;Name=DJ40_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12745;old_locus_tag=DJ40_2508 NZ_CP008943.1 Protein Homology CDS 2768350 2769579 . - 0 ID=cds2459;Parent=gene2538;Dbxref=Genbank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_002215753.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2769839 2770204 . + . ID=id180;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2770463 2771455 . + . ID=gene2539;Name=DJ40_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12750;old_locus_tag=DJ40_2509 NZ_CP008943.1 Protein Homology CDS 2770463 2771455 . + 0 ID=cds2460;Parent=gene2539;Dbxref=Genbank:WP_011193324.1;Name=WP_011193324.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=O-acetyltransferase;protein_id=WP_011193324.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2772212 2772769 . + . ID=gene2540;Name=DJ40_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12755;old_locus_tag=DJ40_2510 NZ_CP008943.1 Protein Homology CDS 2772212 2772769 . + 0 ID=cds2461;Parent=gene2540;Dbxref=Genbank:WP_012303333.1;Name=WP_012303333.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_012303333.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2772845 2775343 . + . ID=gene2541;Name=DJ40_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12760;old_locus_tag=DJ40_2511 NZ_CP008943.1 Protein Homology CDS 2772845 2775343 . + 0 ID=cds2462;Parent=gene2541;Dbxref=Genbank:WP_049862784.1;Name=WP_049862784.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_049862784.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2775436 2776203 . + . ID=gene2542;Name=DJ40_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12765;old_locus_tag=DJ40_2512 NZ_CP008943.1 Protein Homology CDS 2775436 2776203 . + 0 ID=cds2463;Parent=gene2542;Dbxref=Genbank:WP_012303335.1;Name=WP_012303335.1;gbkey=CDS;product=fimbrial chaperone protein StdC;protein_id=WP_012303335.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2776242 2777228 . + . ID=gene2543;Name=DJ40_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12770;old_locus_tag=DJ40_2513 NZ_CP008943.1 Protein Homology CDS 2776242 2777228 . + 0 ID=cds2464;Parent=gene2543;Dbxref=Genbank:WP_038400723.1;Name=WP_038400723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400723.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2777327 2778781 . - . ID=gene2544;Name=DJ40_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12775;old_locus_tag=DJ40_2514 NZ_CP008943.1 Protein Homology CDS 2777327 2778781 . - 0 ID=cds2465;Parent=gene2544;Dbxref=Genbank:WP_038400724.1;Name=WP_038400724.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulose kinase;protein_id=WP_038400724.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2778905 2780224 . - . ID=gene2545;Name=DJ40_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12780;old_locus_tag=DJ40_2515 NZ_CP008943.1 Protein Homology CDS 2778905 2780224 . - 0 ID=cds2466;Parent=gene2545;Dbxref=Genbank:WP_002209593.1;Name=WP_002209593.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2780687 2781682 . + . ID=gene2546;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=DJ40_RS12785;old_locus_tag=DJ40_2516 NZ_CP008943.1 Protein Homology CDS 2780687 2781682 . + 0 ID=cds2467;Parent=gene2546;Dbxref=Genbank:WP_002209591.1;Name=WP_002209591.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;product=xylose ABC transporter substrate-binding protein;protein_id=WP_002209591.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2781890 2783422 . + . ID=gene2547;Name=DJ40_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12790;old_locus_tag=DJ40_2517 NZ_CP008943.1 Protein Homology CDS 2781890 2783422 . + 0 ID=cds2468;Parent=gene2547;Dbxref=Genbank:WP_002209590.1;Name=WP_002209590.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=WP_002209590.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2783409 2784593 . + . ID=gene2548;Name=DJ40_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12795;old_locus_tag=DJ40_2518 NZ_CP008943.1 Protein Homology CDS 2783409 2784593 . + 0 ID=cds2469;Parent=gene2548;Dbxref=Genbank:WP_038400725.1;Name=WP_038400725.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038400725.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2784683 2785876 . + . ID=gene2549;Name=DJ40_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12800;old_locus_tag=DJ40_2519 NZ_CP008943.1 Protein Homology CDS 2784683 2785876 . + 0 ID=cds2470;Parent=gene2549;Dbxref=Genbank:WP_002209588.1;Name=WP_002209588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209588.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2786262 2787455 . + . ID=gene2550;Name=DJ40_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12805;old_locus_tag=DJ40_2521 NZ_CP008943.1 Protein Homology CDS 2786262 2787455 . + 0 ID=cds2471;Parent=gene2550;Dbxref=Genbank:WP_038400727.1;Name=WP_038400727.1;gbkey=CDS;product=integrase;protein_id=WP_038400727.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2787442 2788821 . + . ID=gene2551;Name=DJ40_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12810;old_locus_tag=DJ40_2522 NZ_CP008943.1 Protein Homology CDS 2787442 2788821 . + 0 ID=cds2472;Parent=gene2551;Dbxref=Genbank:WP_002209586.1;Name=WP_002209586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209586.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2789090 2789335 . - . ID=gene2552;Name=DJ40_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12815;old_locus_tag=DJ40_2523 NZ_CP008943.1 Protein Homology CDS 2789090 2789335 . - 0 ID=cds2473;Parent=gene2552;Dbxref=Genbank:WP_038400729.1;Name=WP_038400729.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038400729.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2789509 2789802 . - . ID=gene2553;Name=DJ40_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12820;old_locus_tag=DJ40_2525 NZ_CP008943.1 Protein Homology CDS 2789509 2789802 . - 0 ID=cds2474;Parent=gene2553;Dbxref=Genbank:WP_002361323.1;Name=WP_002361323.1;gbkey=CDS;product=transposase;protein_id=WP_002361323.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2789802 2790218 . - . ID=gene2554;Name=DJ40_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12825;old_locus_tag=DJ40_2526 NZ_CP008943.1 Protein Homology CDS 2789802 2790218 . - 0 ID=cds2475;Parent=gene2554;Dbxref=Genbank:WP_002414078.1;Name=WP_002414078.1;gbkey=CDS;product=transposase;protein_id=WP_002414078.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2790480 2790842 . - . ID=gene2555;Name=DJ40_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12830;old_locus_tag=DJ40_2527 NZ_CP008943.1 Protein Homology CDS 2790480 2790842 . - 0 ID=cds2476;Parent=gene2555;Dbxref=Genbank:WP_002209585.1;Name=WP_002209585.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209585.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2790905 2791165 . - . ID=gene2556;Name=DJ40_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12835;old_locus_tag=DJ40_2528 NZ_CP008943.1 Protein Homology CDS 2790905 2791165 . - 0 ID=cds2477;Parent=gene2556;Dbxref=Genbank:WP_038400732.1;Name=WP_038400732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400732.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2791766 2791951 . + . ID=gene2557;Name=DJ40_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12840;old_locus_tag=DJ40_2529 NZ_CP008943.1 Protein Homology CDS 2791766 2791951 . + 0 ID=cds2478;Parent=gene2557;Dbxref=Genbank:WP_002214362.1;Name=WP_002214362.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214362.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2792189 2792689 . + . ID=gene2558;Name=DJ40_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12845;old_locus_tag=DJ40_2531 NZ_CP008943.1 Protein Homology CDS 2792189 2792689 . + 0 ID=cds2479;Parent=gene2558;Dbxref=Genbank:WP_038400734.1;Name=WP_038400734.1;gbkey=CDS;product=toxin Fic;protein_id=WP_038400734.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2792686 2793444 . - . ID=gene2559;Name=DJ40_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12850;old_locus_tag=DJ40_2530 NZ_CP008943.1 Protein Homology CDS 2792686 2793444 . - 0 ID=cds2480;Parent=gene2559;Dbxref=Genbank:WP_002209584.1;Name=WP_002209584.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002209584.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2793441 2794448 . - . ID=gene2560;Name=DJ40_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12855;old_locus_tag=DJ40_2532 NZ_CP008943.1 Protein Homology CDS 2793441 2794448 . - 0 ID=cds2481;Parent=gene2560;Dbxref=Genbank:WP_002209583.1;Name=WP_002209583.1;gbkey=CDS;product=enterobactin ABC transporter permease;protein_id=WP_002209583.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2794438 2795397 . - . ID=gene2561;Name=DJ40_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12860;old_locus_tag=DJ40_2533 NZ_CP008943.1 Protein Homology CDS 2794438 2795397 . - 0 ID=cds2482;Parent=gene2561;Dbxref=Genbank:WP_011193295.1;Name=WP_011193295.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_011193295.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2795407 2796360 . - . ID=gene2562;Name=DJ40_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12865;old_locus_tag=DJ40_2534 NZ_CP008943.1 Protein Homology CDS 2795407 2796360 . - 0 ID=cds2483;Parent=gene2562;Dbxref=Genbank:WP_002209581.1;Name=WP_002209581.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2796883 2798127 . - . ID=gene2563;Name=DJ40_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12870;old_locus_tag=DJ40_2535 NZ_CP008943.1 Protein Homology CDS 2796883 2798127 . - 0 ID=cds2484;Parent=gene2563;Dbxref=Genbank:WP_002209580.1;Name=WP_002209580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209580.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2798129 2799058 . - . ID=gene2564;Name=DJ40_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12875;old_locus_tag=DJ40_2536 NZ_CP008943.1 Protein Homology CDS 2798129 2799058 . - 0 ID=cds2485;Parent=gene2564;Dbxref=Genbank:WP_038400735.1;Name=WP_038400735.1;gbkey=CDS;product=transporter;protein_id=WP_038400735.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2799141 2799707 . - . ID=gene2565;Name=DJ40_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12880;old_locus_tag=DJ40_2537 NZ_CP008943.1 Protein Homology CDS 2799141 2799707 . - 0 ID=cds2486;Parent=gene2565;Dbxref=Genbank:WP_002209578.1;Name=WP_002209578.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002209578.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2799704 2800648 . - . ID=gene2566;Name=DJ40_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12885;old_locus_tag=DJ40_2538 NZ_CP008943.1 Protein Homology CDS 2799704 2800648 . - 0 ID=cds2487;Parent=gene2566;Dbxref=Genbank:WP_002209577.1;Name=WP_002209577.1;gbkey=CDS;product=pyridoxal-5'-phosphate-dependent protein;protein_id=WP_002209577.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2801375 2803066 . + . ID=gene2567;Name=DJ40_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12890;old_locus_tag=DJ40_2539 NZ_CP008943.1 Protein Homology CDS 2801375 2803066 . + 0 ID=cds2488;Parent=gene2567;Dbxref=Genbank:WP_002209576.1;Name=WP_002209576.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2803063 2804595 . + . ID=gene2568;Name=DJ40_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12895;old_locus_tag=DJ40_2540 NZ_CP008943.1 Protein Homology CDS 2803063 2804595 . + 0 ID=cds2489;Parent=gene2568;Dbxref=Genbank:WP_002209575.1;Name=WP_002209575.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=WP_002209575.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2805013 2806416 . + . ID=gene2569;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=DJ40_RS12900;old_locus_tag=DJ40_2541 NZ_CP008943.1 Protein Homology CDS 2805013 2806416 . + 0 ID=cds2490;Parent=gene2569;Dbxref=Genbank:WP_002214368.1;Name=WP_002214368.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002214368.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2806884 2808347 . + . ID=gene2570;Name=DJ40_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12905;old_locus_tag=DJ40_2542 NZ_CP008943.1 Protein Homology CDS 2806884 2808347 . + 0 ID=cds2491;Parent=gene2570;Dbxref=Genbank:WP_002209573.1;Name=WP_002209573.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209573.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2808867 2810558 . + . ID=gene2571;Name=DJ40_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12910;old_locus_tag=DJ40_2543 NZ_CP008943.1 Protein Homology CDS 2808867 2810558 . + 0 ID=cds2492;Parent=gene2571;Dbxref=Genbank:WP_002209571.1;Name=WP_002209571.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=WP_002209571.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2810674 2811264 . + . ID=gene2572;Name=DJ40_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12915;old_locus_tag=DJ40_2544 NZ_CP008943.1 Protein Homology CDS 2810674 2811264 . + 0 ID=cds2493;Parent=gene2572;Dbxref=Genbank:WP_002209570.1;Name=WP_002209570.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209570.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2811261 2812790 . + . ID=gene2573;Name=DJ40_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12920;old_locus_tag=DJ40_2545 NZ_CP008943.1 Protein Homology CDS 2811261 2812790 . + 0 ID=cds2494;Parent=gene2573;Dbxref=Genbank:WP_012105945.1;Name=WP_012105945.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_012105945.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2812885 2814216 . + . ID=gene2574;Name=DJ40_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12925;old_locus_tag=DJ40_2546 NZ_CP008943.1 Protein Homology CDS 2812885 2814216 . + 0 ID=cds2495;Parent=gene2574;Dbxref=Genbank:WP_012105944.1;Name=WP_012105944.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105944.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2814333 2814409 . + . ID=gene2575;Name=DJ40_RS12930;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS12930;old_locus_tag=DJ40_2548 NZ_CP008943.1 tRNAscan-SE tRNA 2814333 2814409 . + . ID=rna70;Parent=gene2575;anticodon=(pos:2814367..2814369);gbkey=tRNA;product=tRNA-Pro NZ_CP008943.1 tRNAscan-SE exon 2814333 2814409 . + . ID=id181;Parent=rna70;anticodon=(pos:2814367..2814369);gbkey=tRNA;product=tRNA-Pro NZ_CP008943.1 RefSeq gene 2814722 2816113 . + . ID=gene2576;Name=DJ40_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12935;old_locus_tag=DJ40_2549 NZ_CP008943.1 Protein Homology CDS 2814722 2816113 . + 0 ID=cds2496;Parent=gene2576;Dbxref=Genbank:WP_038400739.1;Name=WP_038400739.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_038400739.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2816315 2817985 . + . ID=gene2577;Name=DJ40_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12940;old_locus_tag=DJ40_2550 NZ_CP008943.1 Protein Homology CDS 2816315 2817985 . + 0 ID=cds2497;Parent=gene2577;Dbxref=Genbank:WP_038401692.1;Name=WP_038401692.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_038401692.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2818045 2818251 . + . ID=gene2578;Name=DJ40_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12945;old_locus_tag=DJ40_2551 NZ_CP008943.1 Protein Homology CDS 2818045 2818251 . + 0 ID=cds2498;Parent=gene2578;Dbxref=Genbank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2818654 2820261 . + . ID=gene2579;Name=DJ40_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12950;old_locus_tag=DJ40_2552 NZ_CP008943.1 Protein Homology CDS 2818654 2820261 . + 0 ID=cds2499;Parent=gene2579;Dbxref=Genbank:WP_002209564.1;Name=WP_002209564.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002209564.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2820544 2821563 . + . ID=gene2580;Name=DJ40_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12955;old_locus_tag=DJ40_2553 NZ_CP008943.1 Protein Homology CDS 2820544 2821563 . + 0 ID=cds2500;Parent=gene2580;Dbxref=Genbank:WP_038400741.1;Name=WP_038400741.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400741.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2821574 2822476 . + . ID=gene2581;Name=DJ40_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12960;old_locus_tag=DJ40_2554 NZ_CP008943.1 Protein Homology CDS 2821574 2822476 . + 0 ID=cds2501;Parent=gene2581;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2822490 2823470 . + . ID=gene2582;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=DJ40_RS12965;old_locus_tag=DJ40_2555 NZ_CP008943.1 Protein Homology CDS 2822490 2823470 . + 0 ID=cds2502;Parent=gene2582;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2823536 2824543 . + . ID=gene2583;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=DJ40_RS12970;old_locus_tag=DJ40_2556 NZ_CP008943.1 Protein Homology CDS 2823536 2824543 . + 0 ID=cds2503;Parent=gene2583;Dbxref=Genbank:WP_002228160.1;Name=WP_002228160.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002228160.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2824661 2825776 . + . ID=gene2584;Name=DJ40_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12975;old_locus_tag=DJ40_2557 NZ_CP008943.1 Protein Homology CDS 2824661 2825776 . + 0 ID=cds2504;Parent=gene2584;Dbxref=Genbank:WP_038400743.1;Name=WP_038400743.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endo-1%2C4-D-glucanase;protein_id=WP_038400743.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2826125 2828107 . + . ID=gene2585;Name=DJ40_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12980;old_locus_tag=DJ40_2558 NZ_CP008943.1 Protein Homology CDS 2826125 2828107 . + 0 ID=cds2505;Parent=gene2585;Dbxref=Genbank:WP_032466832.1;Name=WP_032466832.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_032466832.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2828747 2829451 . + . ID=gene2586;Name=DJ40_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12985;old_locus_tag=DJ40_2559 NZ_CP008943.1 Protein Homology CDS 2828747 2829451 . + 0 ID=cds2506;Parent=gene2586;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2829697 2831415 . + . ID=gene2587;Name=DJ40_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12990;old_locus_tag=DJ40_2560 NZ_CP008943.1 Protein Homology CDS 2829697 2831415 . + 0 ID=cds2507;Parent=gene2587;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2831517 2831996 . + . ID=gene2588;Name=DJ40_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS12995;old_locus_tag=DJ40_2561 NZ_CP008943.1 Protein Homology CDS 2831517 2831996 . + 0 ID=cds2508;Parent=gene2588;Dbxref=Genbank:WP_012303353.1;Name=WP_012303353.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303353.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2832468 2833757 . + . ID=gene2589;Name=DJ40_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13000;old_locus_tag=DJ40_2562 NZ_CP008943.1 Protein Homology CDS 2832468 2833757 . + 0 ID=cds2509;Parent=gene2589;Dbxref=Genbank:WP_002209553.1;Name=WP_002209553.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_002209553.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2834122 2835621 . + . ID=gene2590;Name=DJ40_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13005;old_locus_tag=DJ40_2563 NZ_CP008943.1 Protein Homology CDS 2834122 2835621 . + 0 ID=cds2510;Parent=gene2590;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2835785 2836729 . - . ID=gene2591;Name=DJ40_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13010;old_locus_tag=DJ40_2564 NZ_CP008943.1 Protein Homology CDS 2835785 2836729 . - 0 ID=cds2511;Parent=gene2591;Dbxref=Genbank:WP_002209549.1;Name=WP_002209549.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2837008 2837208 . - . ID=gene2592;Name=DJ40_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13015;old_locus_tag=DJ40_2565 NZ_CP008943.1 Protein Homology CDS 2837008 2837208 . - 0 ID=cds2512;Parent=gene2592;Dbxref=Genbank:WP_002209548.1;Name=WP_002209548.1;gbkey=CDS;product=tautomerase;protein_id=WP_002209548.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2837427 2838272 . + . ID=gene2593;Name=DJ40_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13020;old_locus_tag=DJ40_2566 NZ_CP008943.1 Protein Homology CDS 2837427 2838272 . + 0 ID=cds2513;Parent=gene2593;Dbxref=Genbank:WP_038400746.1;Name=WP_038400746.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=c-di-GMP phosphodiesterase;protein_id=WP_038400746.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2838577 2840790 . + . ID=gene2594;Name=DJ40_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13025;old_locus_tag=DJ40_2567 NZ_CP008943.1 Protein Homology CDS 2838577 2840790 . + 0 ID=cds2514;Parent=gene2594;Dbxref=Genbank:WP_032466831.1;Name=WP_032466831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2840795 2841592 . - . ID=gene2595;Name=DJ40_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13030;old_locus_tag=DJ40_2568 NZ_CP008943.1 Protein Homology CDS 2840795 2841592 . - 0 ID=cds2515;Parent=gene2595;Dbxref=Genbank:WP_011193279.1;Name=WP_011193279.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_011193279.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2841596 2842696 . - . ID=gene2596;Name=DJ40_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13035;old_locus_tag=DJ40_2569 NZ_CP008943.1 Protein Homology CDS 2841596 2842696 . - 0 ID=cds2516;Parent=gene2596;Dbxref=Genbank:WP_032466830.1;Name=WP_032466830.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466830.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2843379 2846591 . + . ID=gene2597;Name=DJ40_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13040;old_locus_tag=DJ40_2570 NZ_CP008943.1 Protein Homology CDS 2843379 2846591 . + 0 ID=cds2517;Parent=gene2597;Dbxref=Genbank:WP_038400748.1;Name=WP_038400748.1;gbkey=CDS;product=autotransporter;protein_id=WP_038400748.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2846769 2847545 . + . ID=gene2598;Name=DJ40_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13045;old_locus_tag=DJ40_2571 NZ_CP008943.1 Protein Homology CDS 2846769 2847545 . + 0 ID=cds2518;Parent=gene2598;Dbxref=Genbank:WP_038401694.1;Name=WP_038401694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401694.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2847550 2848050 . + . ID=gene2599;Name=DJ40_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13050;old_locus_tag=DJ40_2572 NZ_CP008943.1 Protein Homology CDS 2847550 2848050 . + 0 ID=cds2519;Parent=gene2599;Dbxref=Genbank:WP_038400749.1;Name=WP_038400749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400749.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2848119 2848625 . + . ID=gene2600;Name=DJ40_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13055;old_locus_tag=DJ40_2573 NZ_CP008943.1 Protein Homology CDS 2848119 2848625 . + 0 ID=cds2520;Parent=gene2600;Dbxref=Genbank:WP_038400751.1;Name=WP_038400751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400751.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2848871 2850007 . - . ID=gene2601;Name=DJ40_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13060;old_locus_tag=DJ40_2574 NZ_CP008943.1 Protein Homology CDS 2848871 2850007 . - 0 ID=cds2521;Parent=gene2601;Dbxref=Genbank:WP_012303361.1;Name=WP_012303361.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_012303361.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2850018 2851286 . - . ID=gene2602;Name=DJ40_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13065;old_locus_tag=DJ40_2575 NZ_CP008943.1 Protein Homology CDS 2850018 2851286 . - 0 ID=cds2522;Parent=gene2602;Dbxref=Genbank:WP_012105926.1;Name=WP_012105926.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_012105926.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2851464 2852591 . - . ID=gene2603;Name=DJ40_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13070;old_locus_tag=DJ40_2576 NZ_CP008943.1 Protein Homology CDS 2851464 2852591 . - 0 ID=cds2523;Parent=gene2603;Dbxref=Genbank:WP_038400753.1;Name=WP_038400753.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_038400753.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2852802 2854154 . - . ID=gene2604;Name=DJ40_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13075;old_locus_tag=DJ40_2577 NZ_CP008943.1 Protein Homology CDS 2852802 2854154 . - 0 ID=cds2524;Parent=gene2604;Dbxref=Genbank:WP_012303362.1;Name=WP_012303362.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_012303362.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2854322 2855164 . - . ID=gene2605;Name=DJ40_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13080;old_locus_tag=DJ40_2578 NZ_CP008943.1 Protein Homology CDS 2854322 2855164 . - 0 ID=cds2525;Parent=gene2605;Dbxref=Genbank:WP_011193270.1;Name=WP_011193270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193270.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2855493 2857535 . + . ID=gene2606;Name=DJ40_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13085;old_locus_tag=DJ40_2579 NZ_CP008943.1 Protein Homology CDS 2855493 2857535 . + 0 ID=cds2526;Parent=gene2606;Dbxref=Genbank:WP_038400754.1;Name=WP_038400754.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_038400754.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2857539 2858309 . + . ID=gene2607;Name=DJ40_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13090;old_locus_tag=DJ40_2580 NZ_CP008943.1 Protein Homology CDS 2857539 2858309 . + 0 ID=cds2527;Parent=gene2607;Dbxref=Genbank:WP_002215483.1;Name=WP_002215483.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_002215483.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2858374 2859708 . - . ID=gene2608;Name=DJ40_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13095;old_locus_tag=DJ40_2581 NZ_CP008943.1 Protein Homology CDS 2858374 2859708 . - 0 ID=cds2528;Parent=gene2608;Dbxref=Genbank:WP_012303365.1;Name=WP_012303365.1;gbkey=CDS;product=peptidase M10;protein_id=WP_012303365.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2859955 2861298 . - . ID=gene2609;Name=DJ40_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13100;old_locus_tag=DJ40_2582 NZ_CP008943.1 Protein Homology CDS 2859955 2861298 . - 0 ID=cds2529;Parent=gene2609;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2861545 2861991 . - . ID=gene2610;Name=DJ40_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13105;old_locus_tag=DJ40_2583 NZ_CP008943.1 Protein Homology CDS 2861545 2861991 . - 0 ID=cds2530;Parent=gene2610;Dbxref=Genbank:WP_012303366.1;Name=WP_012303366.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_012303366.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2862716 2863051 . + . ID=gene2611;Name=DJ40_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13110;old_locus_tag=DJ40_2584 NZ_CP008943.1 Protein Homology CDS 2862716 2863051 . + 0 ID=cds2531;Parent=gene2611;Dbxref=Genbank:WP_002209527.1;Name=WP_002209527.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002209527.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2863198 2864694 . - . ID=gene2612;Name=DJ40_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13115;old_locus_tag=DJ40_2585 NZ_CP008943.1 Protein Homology CDS 2863198 2864694 . - 0 ID=cds2532;Parent=gene2612;Dbxref=Genbank:WP_011193267.1;Name=WP_011193267.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_011193267.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2865005 2866201 . + . ID=gene2613;Name=DJ40_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13120;old_locus_tag=DJ40_2586 NZ_CP008943.1 Protein Homology CDS 2865005 2866201 . + 0 ID=cds2533;Parent=gene2613;Dbxref=Genbank:WP_038401695.1;Name=WP_038401695.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401695.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2866337 2868892 . - . ID=gene2614;Name=DJ40_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13125;old_locus_tag=DJ40_2587 NZ_CP008943.1 Protein Homology CDS 2866337 2868892 . - 0 ID=cds2534;Parent=gene2614;Dbxref=Genbank:WP_012303369.1;Name=WP_012303369.1;gbkey=CDS;product=histidine kinase;protein_id=WP_012303369.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2869081 2870604 . + . ID=gene2615;Name=DJ40_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13130;old_locus_tag=DJ40_2588 NZ_CP008943.1 Protein Homology CDS 2869081 2870604 . + 0 ID=cds2535;Parent=gene2615;Dbxref=Genbank:WP_011193264.1;Name=WP_011193264.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=WP_011193264.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2870597 2871589 . + . ID=gene2616;Name=DJ40_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13135;old_locus_tag=DJ40_2589 NZ_CP008943.1 Protein Homology CDS 2870597 2871589 . + 0 ID=cds2536;Parent=gene2616;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2871620 2872564 . + . ID=gene2617;Name=DJ40_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13140;old_locus_tag=DJ40_2590 NZ_CP008943.1 Protein Homology CDS 2871620 2872564 . + 0 ID=cds2537;Parent=gene2617;Dbxref=Genbank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2872639 2873322 . + . ID=gene2618;Name=DJ40_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13145;old_locus_tag=DJ40_2591 NZ_CP008943.1 Protein Homology CDS 2872639 2873322 . + 0 ID=cds2538;Parent=gene2618;Dbxref=Genbank:WP_012105913.1;Name=WP_012105913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105913.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2873348 2874208 . + . ID=gene2619;Name=DJ40_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13150;old_locus_tag=DJ40_2592 NZ_CP008943.1 Protein Homology CDS 2873348 2874208 . + 0 ID=cds2539;Parent=gene2619;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2874218 2875225 . + . ID=gene2620;Name=DJ40_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13155;old_locus_tag=DJ40_2593 NZ_CP008943.1 Protein Homology CDS 2874218 2875225 . + 0 ID=cds2540;Parent=gene2620;Dbxref=Genbank:WP_012105912.1;Name=WP_012105912.1;gbkey=CDS;product=sugar kinase;protein_id=WP_012105912.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2875300 2876037 . - . ID=gene2621;Name=DJ40_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13160;old_locus_tag=DJ40_2594 NZ_CP008943.1 Protein Homology CDS 2875300 2876037 . - 0 ID=cds2541;Parent=gene2621;Dbxref=Genbank:WP_002209516.1;Name=WP_002209516.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209516.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2876037 2876297 . - . ID=gene2622;Name=DJ40_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13165 NZ_CP008943.1 Protein Homology CDS 2876037 2876297 . - 0 ID=cds2542;Parent=gene2622;Dbxref=Genbank:WP_038400755.1;Name=WP_038400755.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400755.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2876793 2877488 . + . ID=gene2623;Name=DJ40_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13170;old_locus_tag=DJ40_2595 NZ_CP008943.1 Protein Homology CDS 2876793 2877488 . + 0 ID=cds2543;Parent=gene2623;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2877617 2878612 . + . ID=gene2624;Name=DJ40_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13175;old_locus_tag=DJ40_2596 NZ_CP008943.1 Protein Homology CDS 2877617 2878612 . + 0 ID=cds2544;Parent=gene2624;Dbxref=Genbank:WP_012105911.1;Name=WP_012105911.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_012105911.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2878704 2880020 . - . ID=gene2625;Name=DJ40_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13180;old_locus_tag=DJ40_2597 NZ_CP008943.1 Protein Homology CDS 2878704 2880020 . - 0 ID=cds2545;Parent=gene2625;Dbxref=Genbank:WP_011193259.1;Name=WP_011193259.1;gbkey=CDS;product=idonate transporter;protein_id=WP_011193259.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2880237 2880740 . + . ID=gene2626;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=DJ40_RS13185;old_locus_tag=DJ40_2598 NZ_CP008943.1 Protein Homology CDS 2880237 2880740 . + 0 ID=cds2546;Parent=gene2626;Dbxref=Genbank:WP_002209512.1;Name=WP_002209512.1;gbkey=CDS;gene=idnK;product=gluconokinase;protein_id=WP_002209512.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2881075 2881305 . + . ID=gene2627;Name=DJ40_RS13190;end_range=2881305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS13190;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 2881075 2881305 . + 0 ID=cds2547;Parent=gene2627;end_range=2881305,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2882257 2882579 . + . ID=id182;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2882322 2882711 . + . ID=gene2628;Name=DJ40_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13205;old_locus_tag=DJ40_2601 NZ_CP008943.1 Protein Homology CDS 2882322 2882711 . + 0 ID=cds2548;Parent=gene2628;Dbxref=Genbank:WP_011193257.1;Name=WP_011193257.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193257.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2882690 2883075 . + . ID=id183;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2882818 2883210 . + . ID=gene2629;Name=DJ40_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13210;old_locus_tag=DJ40_2602 NZ_CP008943.1 Protein Homology CDS 2882818 2883210 . + 0 ID=cds2549;Parent=gene2629;Dbxref=Genbank:WP_011193256.1;Name=WP_011193256.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193256.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2883189 2883493 . + . ID=id184;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2883316 2883705 . + . ID=gene2630;Name=DJ40_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13215;old_locus_tag=DJ40_2603 NZ_CP008943.1 Protein Homology CDS 2883316 2883705 . + 0 ID=cds2550;Parent=gene2630;Dbxref=Genbank:WP_011193255.1;Name=WP_011193255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193255.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2883890 2884483 . - . ID=gene2631;Name=DJ40_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13220;old_locus_tag=DJ40_2604 NZ_CP008943.1 Protein Homology CDS 2883890 2884483 . - 0 ID=cds2551;Parent=gene2631;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2884841 2885944 . + . ID=gene2632;Name=DJ40_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13225;old_locus_tag=DJ40_2605 NZ_CP008943.1 Protein Homology CDS 2884841 2885944 . + 0 ID=cds2552;Parent=gene2632;Dbxref=Genbank:WP_011193254.1;Name=WP_011193254.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_011193254.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2890481 2890765 . + . ID=id185;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2890863 2891086 . + . ID=id186;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2891148 2891502 . + . ID=id187;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2892929 2893120 . + . ID=id188;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2893170 2896783 . + . ID=id189;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2895342 2904674 . + . ID=gene2633;Name=DJ40_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21905 NZ_CP008943.1 Protein Homology CDS 2895342 2904674 . + 0 ID=cds2553;Parent=gene2633;Dbxref=Genbank:WP_049862813.1;Name=WP_049862813.1;gbkey=CDS;product=invasin;protein_id=WP_049862813.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2897121 2897345 . + . ID=id190;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2897517 2897740 . + . ID=id191;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2897778 2897886 . + . ID=id192;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2898081 2898468 . + . ID=id193;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2899001 2899105 . + . ID=id194;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2899192 2899955 . + . ID=id195;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 2900005 2900190 . + . ID=id196;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2904899 2906596 . - . ID=gene2634;Name=DJ40_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13235;old_locus_tag=DJ40_2607 NZ_CP008943.1 Protein Homology CDS 2904899 2906596 . - 0 ID=cds2554;Parent=gene2634;Dbxref=Genbank:WP_038400757.1;Name=WP_038400757.1;gbkey=CDS;product=histidine kinase;protein_id=WP_038400757.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2907102 2909285 . + . ID=gene2635;Name=DJ40_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13240;old_locus_tag=DJ40_2608 NZ_CP008943.1 Protein Homology CDS 2907102 2909285 . + 0 ID=cds2555;Parent=gene2635;Dbxref=Genbank:WP_002209500.1;Name=WP_002209500.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=WP_002209500.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2909287 2911275 . + . ID=gene2636;Name=DJ40_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13245;old_locus_tag=DJ40_2609 NZ_CP008943.1 Protein Homology CDS 2909287 2911275 . + 0 ID=cds2556;Parent=gene2636;Dbxref=Genbank:WP_011193250.1;Name=WP_011193250.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_011193250.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2911285 2912571 . + . ID=gene2637;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=DJ40_RS13250;old_locus_tag=DJ40_2610 NZ_CP008943.1 Protein Homology CDS 2911285 2912571 . + 0 ID=cds2557;Parent=gene2637;Dbxref=Genbank:WP_012105899.1;Name=WP_012105899.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_012105899.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2912782 2914212 . + . ID=gene2638;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=DJ40_RS13255;old_locus_tag=DJ40_2611 NZ_CP008943.1 Protein Homology CDS 2912782 2914212 . + 0 ID=cds2558;Parent=gene2638;Dbxref=Genbank:WP_038400758.1;Name=WP_038400758.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_038400758.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2914429 2916876 . + . ID=gene2639;Name=DJ40_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13260;old_locus_tag=DJ40_2612 NZ_CP008943.1 Protein Homology CDS 2914429 2916876 . + 0 ID=cds2559;Parent=gene2639;Dbxref=Genbank:WP_011193248.1;Name=WP_011193248.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_011193248.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2917038 2918552 . - . ID=gene2640;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=DJ40_RS13265;old_locus_tag=DJ40_2613 NZ_CP008943.1 Protein Homology CDS 2917038 2918552 . - 0 ID=cds2560;Parent=gene2640;Dbxref=Genbank:WP_002220236.1;Name=WP_002220236.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002220236.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2918951 2919325 . + . ID=gene2641;Name=DJ40_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13270;old_locus_tag=DJ40_2614 NZ_CP008943.1 Protein Homology CDS 2918951 2919325 . + 0 ID=cds2561;Parent=gene2641;Dbxref=Genbank:WP_038400759.1;Name=WP_038400759.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400759.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2919634 2920098 . + . ID=gene2642;Name=DJ40_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13275;old_locus_tag=DJ40_2615 NZ_CP008943.1 Protein Homology CDS 2919634 2920098 . + 0 ID=cds2562;Parent=gene2642;Dbxref=Genbank:WP_011193247.1;Name=WP_011193247.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193247.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2920265 2920534 . + . ID=gene2643;Name=DJ40_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13280 NZ_CP008943.1 Protein Homology CDS 2920265 2920534 . + 0 ID=cds2563;Parent=gene2643;Dbxref=Genbank:WP_038401699.1;Name=WP_038401699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401699.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2920671 2920978 . + . ID=id197;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2921015 2921773 . - . ID=gene2644;Name=DJ40_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13285;old_locus_tag=DJ40_2616 NZ_CP008943.1 Protein Homology CDS 2921015 2921773 . - 0 ID=cds2564;Parent=gene2644;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2921808 2922644 . - . ID=gene2645;Name=DJ40_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13290;old_locus_tag=DJ40_2617 NZ_CP008943.1 Protein Homology CDS 2921808 2922644 . - 0 ID=cds2565;Parent=gene2645;Dbxref=Genbank:WP_038400760.1;Name=WP_038400760.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=intramembrane serine protease GlpG;protein_id=WP_038400760.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2922662 2922991 . - . ID=gene2646;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=DJ40_RS13295;old_locus_tag=DJ40_2618 NZ_CP008943.1 Protein Homology CDS 2922662 2922991 . - 0 ID=cds2566;Parent=gene2646;Dbxref=Genbank:WP_002218928.1;Name=WP_002218928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002218928.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2923366 2926077 . - . ID=gene2647;Name=DJ40_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13300;old_locus_tag=DJ40_2619 NZ_CP008943.1 Protein Homology CDS 2923366 2926077 . - 0 ID=cds2567;Parent=gene2647;Dbxref=Genbank:WP_038400761.1;Name=WP_038400761.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator MalT;protein_id=WP_038400761.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2926395 2928800 . + . ID=gene2648;Name=DJ40_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13305;old_locus_tag=DJ40_2620 NZ_CP008943.1 Protein Homology CDS 2926395 2928800 . + 0 ID=cds2568;Parent=gene2648;Dbxref=Genbank:WP_012105894.1;Name=WP_012105894.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_012105894.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2928813 2930909 . + . ID=gene2649;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=DJ40_RS13310;old_locus_tag=DJ40_2621 NZ_CP008943.1 Protein Homology CDS 2928813 2930909 . + 0 ID=cds2569;Parent=gene2649;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2931094 2931669 . - . ID=gene2650;Name=DJ40_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13315;old_locus_tag=DJ40_2622 NZ_CP008943.1 Protein Homology CDS 2931094 2931669 . - 0 ID=cds2570;Parent=gene2650;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2931729 2932430 . - . ID=gene2651;Name=DJ40_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13320;old_locus_tag=DJ40_2623 NZ_CP008943.1 Protein Homology CDS 2931729 2932430 . - 0 ID=cds2571;Parent=gene2651;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2932517 2933293 . + . ID=gene2652;Name=DJ40_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13325;old_locus_tag=DJ40_2624 NZ_CP008943.1 Protein Homology CDS 2932517 2933293 . + 0 ID=cds2572;Parent=gene2652;Dbxref=Genbank:WP_002208922.1;Name=WP_002208922.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_002208922.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2933463 2933732 . + . ID=gene2653;Name=DJ40_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13330;old_locus_tag=DJ40_2625 NZ_CP008943.1 Protein Homology CDS 2933463 2933732 . + 0 ID=cds2573;Parent=gene2653;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2933870 2934127 . - . ID=gene2654;Name=DJ40_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13335;old_locus_tag=DJ40_2626 NZ_CP008943.1 Protein Homology CDS 2933870 2934127 . - 0 ID=cds2574;Parent=gene2654;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2934163 2936478 . - . ID=gene2655;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=DJ40_RS13340;old_locus_tag=DJ40_2627 NZ_CP008943.1 Protein Homology CDS 2934163 2936478 . - 0 ID=cds2575;Parent=gene2655;Dbxref=Genbank:WP_012303380.1;Name=WP_012303380.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_012303380.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2936570 2936797 . - . ID=gene2656;Name=DJ40_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13345;old_locus_tag=DJ40_2628 NZ_CP008943.1 Protein Homology CDS 2936570 2936797 . - 0 ID=cds2576;Parent=gene2656;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2936792 2936938 . + . ID=gene2657;Name=DJ40_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13350 NZ_CP008943.1 Protein Homology CDS 2936792 2936938 . + 0 ID=cds2577;Parent=gene2657;Dbxref=Genbank:WP_002215925.1;Name=WP_002215925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215925.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2937321 2939696 . - . ID=gene2658;Name=DJ40_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13355;old_locus_tag=DJ40_2629 NZ_CP008943.1 Protein Homology CDS 2937321 2939696 . - 0 ID=cds2578;Parent=gene2658;Dbxref=Genbank:WP_011193241.1;Name=WP_011193241.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_011193241.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2940230 2940745 . + . ID=gene2659;Name=DJ40_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13360;old_locus_tag=DJ40_2630 NZ_CP008943.1 Protein Homology CDS 2940230 2940745 . + 0 ID=cds2579;Parent=gene2659;Dbxref=Genbank:WP_002208915.1;Name=WP_002208915.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2940881 2941600 . + . ID=gene2660;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=DJ40_RS13365;old_locus_tag=DJ40_2631 NZ_CP008943.1 Protein Homology CDS 2940881 2941600 . + 0 ID=cds2580;Parent=gene2660;Dbxref=Genbank:WP_002208914.1;Name=WP_002208914.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_002208914.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2941597 2942949 . + . ID=gene2661;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=DJ40_RS13370;old_locus_tag=DJ40_2632 NZ_CP008943.1 Protein Homology CDS 2941597 2942949 . + 0 ID=cds2581;Parent=gene2661;Dbxref=Genbank:WP_002208913.1;Name=WP_002208913.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_002208913.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2942943 2943117 . + . ID=id198;gbkey=repeat_region;gene=envZ NZ_CP008943.1 RefSeq gene 2943268 2944887 . - . ID=gene2662;Name=DJ40_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13375;old_locus_tag=DJ40_2633 NZ_CP008943.1 Protein Homology CDS 2943268 2944887 . - 0 ID=cds2582;Parent=gene2662;Dbxref=Genbank:WP_011193240.1;Name=WP_011193240.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_011193240.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2945084 2945965 . - . ID=gene2663;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=DJ40_RS13380;old_locus_tag=DJ40_2634 NZ_CP008943.1 Protein Homology CDS 2945084 2945965 . - 0 ID=cds2583;Parent=gene2663;Dbxref=Genbank:WP_038400762.1;Name=WP_038400762.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_038400762.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2946128 2946535 . - . ID=gene2664;Name=DJ40_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13385;old_locus_tag=DJ40_2635 NZ_CP008943.1 Protein Homology CDS 2946128 2946535 . - 0 ID=cds2584;Parent=gene2664;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2946564 2947244 . - . ID=gene2665;Name=DJ40_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13390;old_locus_tag=DJ40_2636 NZ_CP008943.1 Protein Homology CDS 2946564 2947244 . - 0 ID=cds2585;Parent=gene2665;Dbxref=Genbank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;product=nucleotidase;protein_id=WP_002208909.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2947388 2949535 . - . ID=gene2666;Name=DJ40_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13395;old_locus_tag=DJ40_2637 NZ_CP008943.1 Protein Homology CDS 2947388 2949535 . - 0 ID=cds2586;Parent=gene2666;Dbxref=Genbank:WP_038400763.1;Name=WP_038400763.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_038400763.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2949815 2950009 . + . ID=gene2667;Name=DJ40_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13400;old_locus_tag=DJ40_2638 NZ_CP008943.1 Protein Homology CDS 2949815 2950009 . + 0 ID=cds2587;Parent=gene2667;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2950122 2950667 . + . ID=gene2668;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=DJ40_RS13405;old_locus_tag=DJ40_2639 NZ_CP008943.1 Protein Homology CDS 2950122 2950667 . + 0 ID=cds2588;Parent=gene2668;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2950804 2953359 . - . ID=gene2669;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=DJ40_RS13410;old_locus_tag=DJ40_2640 NZ_CP008943.1 Protein Homology CDS 2950804 2953359 . - 0 ID=cds2589;Parent=gene2669;Dbxref=Genbank:WP_002208906.1;Name=WP_002208906.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_002208906.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2953479 2954375 . + . ID=gene2670;Name=DJ40_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13415;old_locus_tag=DJ40_2641 NZ_CP008943.1 Protein Homology CDS 2953479 2954375 . + 0 ID=cds2590;Parent=gene2670;Dbxref=Genbank:WP_012105886.1;Name=WP_012105886.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_012105886.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2954375 2954980 . + . ID=gene2671;Name=DJ40_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13420;old_locus_tag=DJ40_2642 NZ_CP008943.1 Protein Homology CDS 2954375 2954980 . + 0 ID=cds2591;Parent=gene2671;Dbxref=Genbank:WP_038400764.1;Name=WP_038400764.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_038400764.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2954973 2955554 . + . ID=gene2672;Name=DJ40_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13425;old_locus_tag=DJ40_2643 NZ_CP008943.1 Protein Homology CDS 2954973 2955554 . + 0 ID=cds2592;Parent=gene2672;Dbxref=Genbank:WP_012105884.1;Name=WP_012105884.1;gbkey=CDS;product=membrane protein;protein_id=WP_012105884.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2955589 2955948 . + . ID=gene2673;Name=DJ40_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13430;old_locus_tag=DJ40_2644 NZ_CP008943.1 Protein Homology CDS 2955589 2955948 . + 0 ID=cds2593;Parent=gene2673;Dbxref=Genbank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223837.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2956390 2957514 . + . ID=gene2674;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=DJ40_RS13435;old_locus_tag=DJ40_2645 NZ_CP008943.1 Protein Homology CDS 2956390 2957514 . + 0 ID=cds2594;Parent=gene2674;Dbxref=Genbank:WP_002228144.1;Name=WP_002228144.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_002228144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2957863 2958384 . + . ID=gene2675;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=DJ40_RS13440;old_locus_tag=DJ40_2646 NZ_CP008943.1 Protein Homology CDS 2957863 2958384 . + 0 ID=cds2595;Parent=gene2675;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2958441 2959529 . + . ID=gene2676;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=DJ40_RS13445;old_locus_tag=DJ40_2647 NZ_CP008943.1 Protein Homology CDS 2958441 2959529 . + 0 ID=cds2596;Parent=gene2676;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2959783 2960772 . + . ID=gene2677;Name=DJ40_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13450;old_locus_tag=DJ40_2648 NZ_CP008943.1 Protein Homology CDS 2959783 2960772 . + 0 ID=cds2597;Parent=gene2677;Dbxref=Genbank:WP_002208897.1;Name=WP_002208897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208897.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2960856 2961671 . + . ID=gene2678;Name=DJ40_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13455;old_locus_tag=DJ40_2649 NZ_CP008943.1 Protein Homology CDS 2960856 2961671 . + 0 ID=cds2598;Parent=gene2678;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2961974 2962651 . + . ID=gene2679;Name=DJ40_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13460;old_locus_tag=DJ40_2650 NZ_CP008943.1 Protein Homology CDS 2961974 2962651 . + 0 ID=cds2599;Parent=gene2679;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2962644 2963342 . + . ID=gene2680;Name=DJ40_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13465;old_locus_tag=DJ40_2651 NZ_CP008943.1 Protein Homology CDS 2962644 2963342 . + 0 ID=cds2600;Parent=gene2680;Dbxref=Genbank:WP_002208892.1;Name=WP_002208892.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2963344 2964384 . + . ID=gene2681;Name=DJ40_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13470;old_locus_tag=DJ40_2652 NZ_CP008943.1 Protein Homology CDS 2963344 2964384 . + 0 ID=cds2601;Parent=gene2681;Dbxref=Genbank:WP_002208891.1;Name=WP_002208891.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_002208891.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2964502 2965923 . - . ID=gene2682;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=DJ40_RS13475;old_locus_tag=DJ40_2653 NZ_CP008943.1 Protein Homology CDS 2964502 2965923 . - 0 ID=cds2602;Parent=gene2682;Dbxref=Genbank:WP_038400765.1;Name=WP_038400765.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase 2;protein_id=WP_038400765.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2965993 2966799 . - . ID=gene2683;Name=DJ40_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13480;old_locus_tag=DJ40_2654 NZ_CP008943.1 Protein Homology CDS 2965993 2966799 . - 0 ID=cds2603;Parent=gene2683;Dbxref=Genbank:WP_002208888.1;Name=WP_002208888.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2966982 2967308 . - . ID=gene2684;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=DJ40_RS13485;old_locus_tag=DJ40_2655 NZ_CP008943.1 Protein Homology CDS 2966982 2967308 . - 0 ID=cds2604;Parent=gene2684;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2967305 2969851 . - . ID=gene2685;Name=DJ40_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13490;old_locus_tag=DJ40_2656 NZ_CP008943.1 Protein Homology CDS 2967305 2969851 . - 0 ID=cds2605;Parent=gene2685;Dbxref=Genbank:WP_012303424.1;Name=WP_012303424.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_012303424.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2970173 2971471 . + . ID=gene2686;Name=DJ40_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13495;old_locus_tag=DJ40_2657 NZ_CP008943.1 Protein Homology CDS 2970173 2971471 . + 0 ID=cds2606;Parent=gene2686;Dbxref=Genbank:WP_002228747.1;Name=WP_002228747.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2971556 2972740 . - . ID=gene2687;Name=DJ40_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13500;old_locus_tag=DJ40_2658 NZ_CP008943.1 Protein Homology CDS 2971556 2972740 . - 0 ID=cds2607;Parent=gene2687;Dbxref=Genbank:WP_011193229.1;Name=WP_011193229.1;gbkey=CDS;product=protein TsgA;protein_id=WP_011193229.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2973226 2975271 . + . ID=gene2688;Name=DJ40_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13505;old_locus_tag=DJ40_2659 NZ_CP008943.1 Protein Homology CDS 2973226 2975271 . + 0 ID=cds2608;Parent=gene2688;Dbxref=Genbank:WP_011193228.1;Name=WP_011193228.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_011193228.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2975366 2976352 . - . ID=gene2689;Name=DJ40_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13510;old_locus_tag=DJ40_2660 NZ_CP008943.1 Protein Homology CDS 2975366 2976352 . - 0 ID=cds2609;Parent=gene2689;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2976601 2977914 . - . ID=gene2690;Name=DJ40_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13515;old_locus_tag=DJ40_2661 NZ_CP008943.1 Protein Homology CDS 2976601 2977914 . - 0 ID=cds2610;Parent=gene2690;Dbxref=Genbank:WP_011193227.1;Name=WP_011193227.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_011193227.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2978429 2978998 . + . ID=gene2691;Name=DJ40_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13520;old_locus_tag=DJ40_2662 NZ_CP008943.1 Protein Homology CDS 2978429 2978998 . + 0 ID=cds2611;Parent=gene2691;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2979324 2980856 . + . ID=gene2692;Name=DJ40_RS13525;end_range=2980856,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS13525;old_locus_tag=DJ40_2663;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 2979324 2980856 . + 0 ID=cds2612;Parent=gene2692;end_range=2980856,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2981107 2981682 . + . ID=gene2693;Name=DJ40_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13530;old_locus_tag=DJ40_2664 NZ_CP008943.1 Protein Homology CDS 2981107 2981682 . + 0 ID=cds2613;Parent=gene2693;Dbxref=Genbank:WP_011193225.1;Name=WP_011193225.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_011193225.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2981815 2983032 . + . ID=gene2694;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=DJ40_RS13535;old_locus_tag=DJ40_2665 NZ_CP008943.1 Protein Homology CDS 2981815 2983032 . + 0 ID=cds2614;Parent=gene2694;Dbxref=Genbank:WP_002212295.1;Name=WP_002212295.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=WP_002212295.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 2983069 2983238 . + . ID=id199;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 2983258 2985378 . - . ID=gene2695;Name=DJ40_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13540;old_locus_tag=DJ40_2666 NZ_CP008943.1 Protein Homology CDS 2983258 2985378 . - 0 ID=cds2615;Parent=gene2695;Dbxref=Genbank:WP_011193223.1;Name=WP_011193223.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193223.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2985464 2986096 . - . ID=gene2696;Name=DJ40_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13545;old_locus_tag=DJ40_2667 NZ_CP008943.1 Protein Homology CDS 2985464 2986096 . - 0 ID=cds2616;Parent=gene2696;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2986432 2986839 . + . ID=gene2697;Name=DJ40_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13550;old_locus_tag=DJ40_2668 NZ_CP008943.1 Protein Homology CDS 2986432 2986839 . + 0 ID=cds2617;Parent=gene2697;Dbxref=Genbank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212298.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2986911 2987342 . + . ID=gene2698;Name=DJ40_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13555;old_locus_tag=DJ40_2669 NZ_CP008943.1 Protein Homology CDS 2986911 2987342 . + 0 ID=cds2618;Parent=gene2698;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2987520 2988389 . - . ID=gene2699;Name=DJ40_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13560;old_locus_tag=DJ40_2670 NZ_CP008943.1 Protein Homology CDS 2987520 2988389 . - 0 ID=cds2619;Parent=gene2699;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2988538 2988774 . - . ID=gene2700;Name=DJ40_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13565;old_locus_tag=DJ40_2671 NZ_CP008943.1 Protein Homology CDS 2988538 2988774 . - 0 ID=cds2620;Parent=gene2700;Dbxref=Genbank:WP_011193222.1;Name=WP_011193222.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193222.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2988771 2989751 . - . ID=gene2701;Name=DJ40_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13570;old_locus_tag=DJ40_2672 NZ_CP008943.1 Protein Homology CDS 2988771 2989751 . - 0 ID=cds2621;Parent=gene2701;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2989853 2990455 . + . ID=gene2702;Name=DJ40_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13575;old_locus_tag=DJ40_2673 NZ_CP008943.1 Protein Homology CDS 2989853 2990455 . + 0 ID=cds2622;Parent=gene2702;Dbxref=Genbank:WP_011193221.1;Name=WP_011193221.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_011193221.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2990658 2991719 . + . ID=gene2703;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=DJ40_RS13580;old_locus_tag=DJ40_2674 NZ_CP008943.1 Protein Homology CDS 2990658 2991719 . + 0 ID=cds2623;Parent=gene2703;Dbxref=Genbank:WP_002212305.1;Name=WP_002212305.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_002212305.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2991728 2992495 . + . ID=gene2704;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=DJ40_RS13585;old_locus_tag=DJ40_2675 NZ_CP008943.1 Protein Homology CDS 2991728 2992495 . + 0 ID=cds2624;Parent=gene2704;Dbxref=Genbank:WP_002212307.1;Name=WP_002212307.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_002212307.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2992492 2993346 . + . ID=gene2705;Name=DJ40_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13590;old_locus_tag=DJ40_2676 NZ_CP008943.1 Protein Homology CDS 2992492 2993346 . + 0 ID=cds2625;Parent=gene2705;Dbxref=Genbank:WP_032466807.1;Name=WP_032466807.1;gbkey=CDS;product=taurine transporter subunit;protein_id=WP_032466807.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2993343 2994191 . + . ID=gene2706;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=DJ40_RS13595;old_locus_tag=DJ40_2677 NZ_CP008943.1 Protein Homology CDS 2993343 2994191 . + 0 ID=cds2626;Parent=gene2706;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2994204 2995185 . - . ID=gene2707;Name=DJ40_RS13600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS13600;pseudo=true NZ_CP008943.1 Protein Homology CDS 2994204 2995185 . - 0 ID=cds2627;Parent=gene2707;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyl transferase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 2995278 2996267 . - . ID=gene2708;Name=DJ40_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13605;old_locus_tag=DJ40_2680 NZ_CP008943.1 Protein Homology CDS 2995278 2996267 . - 0 ID=cds2628;Parent=gene2708;Dbxref=Genbank:WP_038400766.1;Name=WP_038400766.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_038400766.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2996402 2998324 . - . ID=gene2709;Name=DJ40_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13610;old_locus_tag=DJ40_2681 NZ_CP008943.1 Protein Homology CDS 2996402 2998324 . - 0 ID=cds2629;Parent=gene2709;Dbxref=Genbank:WP_002230378.1;Name=WP_002230378.1;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002230378.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2998575 2999123 . + . ID=gene2710;Name=DJ40_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13615;old_locus_tag=DJ40_2682 NZ_CP008943.1 Protein Homology CDS 2998575 2999123 . + 0 ID=cds2630;Parent=gene2710;Dbxref=Genbank:WP_002215966.1;Name=WP_002215966.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 2999127 3000935 . + . ID=gene2711;Name=DJ40_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13620;old_locus_tag=DJ40_2683 NZ_CP008943.1 Protein Homology CDS 2999127 3000935 . + 0 ID=cds2631;Parent=gene2711;Dbxref=Genbank:WP_038400767.1;Name=WP_038400767.1;Note=involved in potassium efflux;gbkey=CDS;product=potassium transporter KefB;protein_id=WP_038400767.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3000951 3001172 . + . ID=gene2712;Name=DJ40_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13625;old_locus_tag=DJ40_2684 NZ_CP008943.1 Protein Homology CDS 3000951 3001172 . + 0 ID=cds2632;Parent=gene2712;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3001267 3001848 . + . ID=gene2713;Name=DJ40_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13630;old_locus_tag=DJ40_2685 NZ_CP008943.1 Protein Homology CDS 3001267 3001848 . + 0 ID=cds2633;Parent=gene2713;Dbxref=Genbank:WP_012230099.1;Name=WP_012230099.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_012230099.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3002049 3002267 . - . ID=gene2714;Name=DJ40_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13635;old_locus_tag=DJ40_2686 NZ_CP008943.1 Protein Homology CDS 3002049 3002267 . - 0 ID=cds2634;Parent=gene2714;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3002582 3003382 . + . ID=gene2715;Name=DJ40_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13640;old_locus_tag=DJ40_2687 NZ_CP008943.1 Protein Homology CDS 3002582 3003382 . + 0 ID=cds2635;Parent=gene2715;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3003636 3004358 . + . ID=gene2716;Name=DJ40_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13645;old_locus_tag=DJ40_2688 NZ_CP008943.1 Protein Homology CDS 3003636 3004358 . + 0 ID=cds2636;Parent=gene2716;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3004358 3004753 . + . ID=gene2717;Name=DJ40_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13650;old_locus_tag=DJ40_2689 NZ_CP008943.1 Protein Homology CDS 3004358 3004753 . + 0 ID=cds2637;Parent=gene2717;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3004753 3005118 . + . ID=gene2718;Name=DJ40_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13655;old_locus_tag=DJ40_2690 NZ_CP008943.1 Protein Homology CDS 3004753 3005118 . + 0 ID=cds2638;Parent=gene2718;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3005138 3005425 . + . ID=gene2719;Name=DJ40_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13660;old_locus_tag=DJ40_2691 NZ_CP008943.1 Protein Homology CDS 3005138 3005425 . + 0 ID=cds2639;Parent=gene2719;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3005563 3005937 . + . ID=gene2720;Name=DJ40_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13665;old_locus_tag=DJ40_2692 NZ_CP008943.1 Protein Homology CDS 3005563 3005937 . + 0 ID=cds2640;Parent=gene2720;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3006034 3006504 . + . ID=gene2721;Name=DJ40_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13670;old_locus_tag=DJ40_2693 NZ_CP008943.1 Protein Homology CDS 3006034 3006504 . + 0 ID=cds2641;Parent=gene2721;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3006598 3008706 . + . ID=gene2722;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DJ40_RS13675;old_locus_tag=DJ40_2694 NZ_CP008943.1 Protein Homology CDS 3006598 3008706 . + 0 ID=cds2642;Parent=gene2722;Dbxref=Genbank:WP_002212325.1;Name=WP_002212325.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3008778 3009962 . + . ID=gene2723;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DJ40_RS13680;old_locus_tag=DJ40_2695 NZ_CP008943.1 Protein Homology CDS 3008778 3009962 . + 0 ID=cds2643;Parent=gene2723;Dbxref=Genbank:WP_038400768.1;Name=WP_038400768.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_038400768.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3010101 3010295 . + . ID=gene2724;Name=DJ40_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13685;old_locus_tag=DJ40_2696 NZ_CP008943.1 Protein Homology CDS 3010101 3010295 . + 0 ID=cds2644;Parent=gene2724;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3010374 3010847 . + . ID=gene2725;Name=DJ40_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13690;old_locus_tag=DJ40_2697 NZ_CP008943.1 Protein Homology CDS 3010374 3010847 . + 0 ID=cds2645;Parent=gene2725;Dbxref=Genbank:WP_012105867.1;Name=WP_012105867.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_012105867.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3011261 3011572 . + . ID=gene2726;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=DJ40_RS13695;old_locus_tag=DJ40_2698 NZ_CP008943.1 Protein Homology CDS 3011261 3011572 . + 0 ID=cds2646;Parent=gene2726;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3011605 3012234 . + . ID=gene2727;Name=DJ40_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13700;old_locus_tag=DJ40_2699 NZ_CP008943.1 Protein Homology CDS 3011605 3012234 . + 0 ID=cds2647;Parent=gene2727;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3012251 3012856 . + . ID=gene2728;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=DJ40_RS13705;old_locus_tag=DJ40_2700 NZ_CP008943.1 Protein Homology CDS 3012251 3012856 . + 0 ID=cds2648;Parent=gene2728;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3012853 3013155 . + . ID=gene2729;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=DJ40_RS13710;old_locus_tag=DJ40_2701 NZ_CP008943.1 Protein Homology CDS 3012853 3013155 . + 0 ID=cds2649;Parent=gene2729;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3013172 3013996 . + . ID=gene2730;Name=DJ40_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13715;old_locus_tag=DJ40_2702 NZ_CP008943.1 Protein Homology CDS 3013172 3013996 . + 0 ID=cds2650;Parent=gene2730;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3014011 3014289 . + . ID=gene2731;Name=DJ40_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13720;old_locus_tag=DJ40_2703 NZ_CP008943.1 Protein Homology CDS 3014011 3014289 . + 0 ID=cds2651;Parent=gene2731;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3014304 3014636 . + . ID=gene2732;Name=DJ40_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13725;old_locus_tag=DJ40_2704 NZ_CP008943.1 Protein Homology CDS 3014304 3014636 . + 0 ID=cds2652;Parent=gene2732;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3014654 3015352 . + . ID=gene2733;Name=DJ40_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13730;old_locus_tag=DJ40_2705 NZ_CP008943.1 Protein Homology CDS 3014654 3015352 . + 0 ID=cds2653;Parent=gene2733;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3015365 3015775 . + . ID=gene2734;Name=DJ40_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13735;old_locus_tag=DJ40_2706 NZ_CP008943.1 Protein Homology CDS 3015365 3015775 . + 0 ID=cds2654;Parent=gene2734;Dbxref=Genbank:WP_038400769.1;Name=WP_038400769.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_038400769.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3015775 3015966 . + . ID=gene2735;Name=DJ40_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13740;old_locus_tag=DJ40_2707 NZ_CP008943.1 Protein Homology CDS 3015775 3015966 . + 0 ID=cds2655;Parent=gene2735;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3015966 3016220 . + . ID=gene2736;Name=DJ40_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13745;old_locus_tag=DJ40_2708 NZ_CP008943.1 Protein Homology CDS 3015966 3016220 . + 0 ID=cds2656;Parent=gene2736;Dbxref=Genbank:WP_002228135.1;Name=WP_002228135.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3016401 3016772 . + . ID=gene2737;Name=DJ40_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13750;old_locus_tag=DJ40_2709 NZ_CP008943.1 Protein Homology CDS 3016401 3016772 . + 0 ID=cds2657;Parent=gene2737;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3016783 3017097 . + . ID=gene2738;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=DJ40_RS13755;old_locus_tag=DJ40_2710 NZ_CP008943.1 Protein Homology CDS 3016783 3017097 . + 0 ID=cds2658;Parent=gene2738;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3017112 3017651 . + . ID=gene2739;Name=DJ40_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13760;old_locus_tag=DJ40_2711 NZ_CP008943.1 Protein Homology CDS 3017112 3017651 . + 0 ID=cds2659;Parent=gene2739;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3017665 3017970 . + . ID=gene2740;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=DJ40_RS13765;old_locus_tag=DJ40_2712 NZ_CP008943.1 Protein Homology CDS 3017665 3017970 . + 0 ID=cds2660;Parent=gene2740;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3018004 3018396 . + . ID=gene2741;Name=DJ40_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13770;old_locus_tag=DJ40_2713 NZ_CP008943.1 Protein Homology CDS 3018004 3018396 . + 0 ID=cds2661;Parent=gene2741;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3018411 3018944 . + . ID=gene2742;Name=DJ40_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13775;old_locus_tag=DJ40_2714 NZ_CP008943.1 Protein Homology CDS 3018411 3018944 . + 0 ID=cds2662;Parent=gene2742;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3018954 3019307 . + . ID=gene2743;Name=DJ40_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13780;old_locus_tag=DJ40_2715 NZ_CP008943.1 Protein Homology CDS 3018954 3019307 . + 0 ID=cds2663;Parent=gene2743;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3019322 3019825 . + . ID=gene2744;Name=DJ40_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13785;old_locus_tag=DJ40_2716 NZ_CP008943.1 Protein Homology CDS 3019322 3019825 . + 0 ID=cds2664;Parent=gene2744;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3019828 3020007 . + . ID=gene2745;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=DJ40_RS13790;old_locus_tag=DJ40_2717 NZ_CP008943.1 Protein Homology CDS 3019828 3020007 . + 0 ID=cds2665;Parent=gene2745;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3020011 3020445 . + . ID=gene2746;Name=DJ40_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13795;old_locus_tag=DJ40_2718 NZ_CP008943.1 Protein Homology CDS 3020011 3020445 . + 0 ID=cds2666;Parent=gene2746;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3020453 3021784 . + . ID=gene2747;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=DJ40_RS13800;old_locus_tag=DJ40_2719 NZ_CP008943.1 Protein Homology CDS 3020453 3021784 . + 0 ID=cds2667;Parent=gene2747;Dbxref=Genbank:WP_002213344.1;Name=WP_002213344.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3021818 3021934 . + . ID=gene2748;Name=DJ40_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13805;old_locus_tag=DJ40_2720 NZ_CP008943.1 Protein Homology CDS 3021818 3021934 . + 0 ID=cds2668;Parent=gene2748;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3022082 3022438 . + . ID=gene2749;Name=DJ40_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13810;old_locus_tag=DJ40_2721 NZ_CP008943.1 Protein Homology CDS 3022082 3022438 . + 0 ID=cds2669;Parent=gene2749;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3022455 3022844 . + . ID=gene2750;Name=DJ40_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13815;old_locus_tag=DJ40_2722 NZ_CP008943.1 Protein Homology CDS 3022455 3022844 . + 0 ID=cds2670;Parent=gene2750;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3022875 3023495 . + . ID=gene2751;Name=DJ40_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13820;old_locus_tag=DJ40_2723 NZ_CP008943.1 Protein Homology CDS 3022875 3023495 . + 0 ID=cds2671;Parent=gene2751;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3023521 3024510 . + . ID=gene2752;Name=DJ40_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13825;old_locus_tag=DJ40_2724 NZ_CP008943.1 Protein Homology CDS 3023521 3024510 . + 0 ID=cds2672;Parent=gene2752;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3024551 3024940 . + . ID=gene2753;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=DJ40_RS13830;old_locus_tag=DJ40_2725 NZ_CP008943.1 Protein Homology CDS 3024551 3024940 . + 0 ID=cds2673;Parent=gene2753;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3025387 3025812 . + . ID=gene2754;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=DJ40_RS13835;old_locus_tag=DJ40_2726 NZ_CP008943.1 Protein Homology CDS 3025387 3025812 . + 0 ID=cds2674;Parent=gene2754;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3025900 3026100 . + . ID=gene2755;Name=DJ40_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13840;old_locus_tag=DJ40_2727 NZ_CP008943.1 Protein Homology CDS 3025900 3026100 . + 0 ID=cds2675;Parent=gene2755;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3026210 3026623 . - . ID=gene2756;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=DJ40_RS13845;old_locus_tag=DJ40_2728 NZ_CP008943.1 Protein Homology CDS 3026210 3026623 . - 0 ID=cds2676;Parent=gene2756;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3026762 3028138 . - . ID=gene2757;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=DJ40_RS13850;old_locus_tag=DJ40_2729 NZ_CP008943.1 Protein Homology CDS 3026762 3028138 . - 0 ID=cds2677;Parent=gene2757;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3028194 3029483 . - . ID=gene2758;Name=DJ40_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13855;old_locus_tag=DJ40_2730 NZ_CP008943.1 Protein Homology CDS 3028194 3029483 . - 0 ID=cds2678;Parent=gene2758;Dbxref=Genbank:WP_038400770.1;Name=WP_038400770.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_038400770.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3029577 3030524 . - . ID=gene2759;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=DJ40_RS13860;old_locus_tag=DJ40_2731 NZ_CP008943.1 Protein Homology CDS 3029577 3030524 . - 0 ID=cds2679;Parent=gene2759;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3030549 3031061 . - . ID=gene2760;Name=DJ40_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13865;old_locus_tag=DJ40_2732 NZ_CP008943.1 Protein Homology CDS 3030549 3031061 . - 0 ID=cds2680;Parent=gene2760;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3031196 3032317 . + . ID=gene2761;Name=DJ40_RS13870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS13870;pseudo=true NZ_CP008943.1 Protein Homology CDS 3031196 3032317 . + 0 ID=cds2681;Parent=gene2761;gbkey=CDS;product=DNA processing protein DprA;pseudo=true;transl_except=(pos:3032036..3032038%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 3032289 3032762 . + . ID=gene2762;Name=DJ40_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13875;old_locus_tag=DJ40_2735 NZ_CP008943.1 Protein Homology CDS 3032289 3032762 . + 0 ID=cds2682;Parent=gene2762;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3032803 3033342 . + . ID=gene2763;Name=DJ40_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13880;old_locus_tag=DJ40_2736 NZ_CP008943.1 Protein Homology CDS 3032803 3033342 . + 0 ID=cds2683;Parent=gene2763;Dbxref=Genbank:WP_012105865.1;Name=WP_012105865.1;gbkey=CDS;product=DNA topoisomerase;protein_id=WP_012105865.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3033344 3033916 . + . ID=gene2764;Name=DJ40_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13885;old_locus_tag=DJ40_2737 NZ_CP008943.1 Protein Homology CDS 3033344 3033916 . + 0 ID=cds2684;Parent=gene2764;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3033925 3034746 . + . ID=gene2765;Name=DJ40_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13890;old_locus_tag=DJ40_2738 NZ_CP008943.1 Protein Homology CDS 3033925 3034746 . + 0 ID=cds2685;Parent=gene2765;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3034801 3035343 . - . ID=gene2766;Name=DJ40_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13895;old_locus_tag=DJ40_2739 NZ_CP008943.1 Protein Homology CDS 3034801 3035343 . - 0 ID=cds2686;Parent=gene2766;Dbxref=Genbank:WP_002230372.1;Name=WP_002230372.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002230372.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3035526 3041039 . + . ID=id200;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3035892 3037440 . + . ID=gene2767;Name=DJ40_RS13905;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS13905;old_locus_tag=DJ40_2740 NZ_CP008943.1 RefSeq rRNA 3035892 3037440 . + . ID=rna71;Parent=gene2767;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq exon 3035892 3037440 . + . ID=id201;Parent=rna71;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq gene 3037574 3037649 . + . ID=gene2768;Name=DJ40_RS13910;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS13910;old_locus_tag=DJ40_2741 NZ_CP008943.1 tRNAscan-SE tRNA 3037574 3037649 . + . ID=rna72;Parent=gene2768;anticodon=(pos:3037608..3037610);gbkey=tRNA;product=tRNA-Glu NZ_CP008943.1 tRNAscan-SE exon 3037574 3037649 . + . ID=id202;Parent=rna72;anticodon=(pos:3037608..3037610);gbkey=tRNA;product=tRNA-Glu NZ_CP008943.1 RefSeq gene 3037892 3040825 . + . ID=gene2769;Name=DJ40_RS13915;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS13915;old_locus_tag=DJ40_2742 NZ_CP008943.1 RefSeq rRNA 3037892 3040825 . + . ID=rna73;Parent=gene2769;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq exon 3037892 3040825 . + . ID=id203;Parent=rna73;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq gene 3040917 3041032 . + . ID=gene2770;Name=DJ40_RS13920;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS13920;old_locus_tag=DJ40_2744 NZ_CP008943.1 cmsearch rRNA 3040917 3041032 . + . ID=rna74;Parent=gene2770;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 3040917 3041032 . + . ID=id204;Parent=rna74;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq gene 3041048 3041123 . + . ID=gene2771;Name=DJ40_RS13925;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS13925;old_locus_tag=DJ40_2745 NZ_CP008943.1 tRNAscan-SE tRNA 3041048 3041123 . + . ID=rna75;Parent=gene2771;anticodon=(pos:3041081..3041083);gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 tRNAscan-SE exon 3041048 3041123 . + . ID=id205;Parent=rna75;anticodon=(pos:3041081..3041083);gbkey=tRNA;product=tRNA-Thr NZ_CP008943.1 RefSeq repeat_region 3041156 3041289 . + . ID=id206;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3041164 3041279 . + . ID=gene2772;Name=DJ40_RS13930;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS13930;old_locus_tag=DJ40_2746 NZ_CP008943.1 cmsearch rRNA 3041164 3041279 . + . ID=rna76;Parent=gene2772;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 3041164 3041279 . + . ID=id207;Parent=rna76;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq repeat_region 3041579 3042892 . + . ID=id208;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3041614 3041762 . - . ID=gene2773;Name=DJ40_RS21910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21910;pseudo=true NZ_CP008943.1 Protein Homology CDS 3041614 3041762 . - 0 ID=cds2687;Parent=gene2773;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3041771 3042820 . - . ID=gene2774;Name=DJ40_RS13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS13935;old_locus_tag=DJ40_2747;partial=true;pseudo=true;start_range=.,3041771 NZ_CP008943.1 Protein Homology CDS 3041771 3042820 . - 0 ID=cds2688;Parent=gene2774;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,3041771;transl_table=11 NZ_CP008943.1 RefSeq gene 3042999 3043271 . - . ID=gene2775;Name=DJ40_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13940;old_locus_tag=DJ40_2748 NZ_CP008943.1 Protein Homology CDS 3042999 3043271 . - 0 ID=cds2689;Parent=gene2775;Dbxref=Genbank:WP_012303443.1;Name=WP_012303443.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303443.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3043339 3044268 . + . ID=gene2776;Name=DJ40_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13945;old_locus_tag=DJ40_2749 NZ_CP008943.1 Protein Homology CDS 3043339 3044268 . + 0 ID=cds2690;Parent=gene2776;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3044689 3046287 . + . ID=gene2777;Name=DJ40_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13950;old_locus_tag=DJ40_2750 NZ_CP008943.1 Protein Homology CDS 3044689 3046287 . + 0 ID=cds2691;Parent=gene2777;Dbxref=Genbank:WP_012104348.1;Name=WP_012104348.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_012104348.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3046334 3047641 . + . ID=gene2778;Name=DJ40_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13955;old_locus_tag=DJ40_2751 NZ_CP008943.1 Protein Homology CDS 3046334 3047641 . + 0 ID=cds2692;Parent=gene2778;Dbxref=Genbank:WP_011193211.1;Name=WP_011193211.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_011193211.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3047685 3047859 . + . ID=id209;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3047897 3049624 . + . ID=gene2779;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=DJ40_RS13960;old_locus_tag=DJ40_2752 NZ_CP008943.1 Protein Homology CDS 3047897 3049624 . + 0 ID=cds2693;Parent=gene2779;Dbxref=Genbank:WP_011193210.1;Name=WP_011193210.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_011193210.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3049744 3050586 . - . ID=gene2780;Name=DJ40_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13965;old_locus_tag=DJ40_2753 NZ_CP008943.1 Protein Homology CDS 3049744 3050586 . - 0 ID=cds2694;Parent=gene2780;Dbxref=Genbank:WP_002230619.1;Name=WP_002230619.1;Note=regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002230619.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3050801 3054496 . + . ID=gene2781;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=DJ40_RS13970;old_locus_tag=DJ40_2754 NZ_CP008943.1 Protein Homology CDS 3050801 3054496 . + 0 ID=cds2695;Parent=gene2781;Dbxref=Genbank:WP_038400771.1;Name=WP_038400771.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_038400771.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3054592 3058611 . - . ID=gene2782;Name=DJ40_RS13975;end_range=3058611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS13975;old_locus_tag=DJ40_2755;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3054592 3058611 . - 0 ID=cds2696;Parent=gene2782;end_range=3058611,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hemolysin;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3059655 3061040 . - . ID=gene2783;Name=DJ40_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13980;old_locus_tag=DJ40_2756 NZ_CP008943.1 Protein Homology CDS 3059655 3061040 . - 0 ID=cds2697;Parent=gene2783;Dbxref=Genbank:WP_011193207.1;Name=WP_011193207.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_011193207.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3061410 3063056 . + . ID=gene2784;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=DJ40_RS13985;old_locus_tag=DJ40_2757 NZ_CP008943.1 Protein Homology CDS 3061410 3063056 . + 0 ID=cds2698;Parent=gene2784;Dbxref=Genbank:WP_002212085.1;Name=WP_002212085.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3063191 3063598 . + . ID=gene2785;Name=DJ40_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS13990;old_locus_tag=DJ40_2758 NZ_CP008943.1 Protein Homology CDS 3063191 3063598 . + 0 ID=cds2699;Parent=gene2785;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3063741 3064631 . - . ID=gene2786;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=DJ40_RS13995;old_locus_tag=DJ40_2759 NZ_CP008943.1 Protein Homology CDS 3063741 3064631 . - 0 ID=cds2700;Parent=gene2786;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3064645 3066222 . - . ID=gene2787;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=DJ40_RS14000;old_locus_tag=DJ40_2760 NZ_CP008943.1 Protein Homology CDS 3064645 3066222 . - 0 ID=cds2701;Parent=gene2787;Dbxref=Genbank:WP_011193206.1;Name=WP_011193206.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_011193206.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3066409 3067620 . - . ID=gene2788;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=DJ40_RS14005;old_locus_tag=DJ40_2761 NZ_CP008943.1 Protein Homology CDS 3066409 3067620 . - 0 ID=cds2702;Parent=gene2788;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3068208 3068444 . + . ID=gene2789;Name=DJ40_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14010;old_locus_tag=DJ40_2762 NZ_CP008943.1 Protein Homology CDS 3068208 3068444 . + 0 ID=cds2703;Parent=gene2789;Dbxref=Genbank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3068448 3069557 . + . ID=gene2790;Name=DJ40_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14015;old_locus_tag=DJ40_2763 NZ_CP008943.1 Protein Homology CDS 3068448 3069557 . + 0 ID=cds2704;Parent=gene2790;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3069628 3070899 . + . ID=gene2791;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=DJ40_RS14020;old_locus_tag=DJ40_2764 NZ_CP008943.1 Protein Homology CDS 3069628 3070899 . + 0 ID=cds2705;Parent=gene2791;Dbxref=Genbank:WP_002212092.1;Name=WP_002212092.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3071140 3072051 . + . ID=gene2792;Name=DJ40_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14025;old_locus_tag=DJ40_2765 NZ_CP008943.1 Protein Homology CDS 3071140 3072051 . + 0 ID=cds2706;Parent=gene2792;Dbxref=Genbank:WP_011193205.1;Name=WP_011193205.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_011193205.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3072523 3072801 . + . ID=gene2793;Name=DJ40_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14030;old_locus_tag=DJ40_2766 NZ_CP008943.1 Protein Homology CDS 3072523 3072801 . + 0 ID=cds2707;Parent=gene2793;Dbxref=Genbank:WP_038400772.1;Name=WP_038400772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400772.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3072953 3073471 . - . ID=gene2794;Name=DJ40_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14035;old_locus_tag=DJ40_2767 NZ_CP008943.1 Protein Homology CDS 3072953 3073471 . - 0 ID=cds2708;Parent=gene2794;Dbxref=Genbank:WP_011193203.1;Name=WP_011193203.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193203.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3073995 3074492 . + . ID=gene2795;Name=DJ40_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14040;old_locus_tag=DJ40_2768 NZ_CP008943.1 Protein Homology CDS 3073995 3074492 . + 0 ID=cds2709;Parent=gene2795;Dbxref=Genbank:WP_002212098.1;Name=WP_002212098.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212098.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3074560 3076041 . + . ID=gene2796;Name=DJ40_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14045;old_locus_tag=DJ40_2769 NZ_CP008943.1 Protein Homology CDS 3074560 3076041 . + 0 ID=cds2710;Parent=gene2796;Dbxref=Genbank:WP_002230616.1;Name=WP_002230616.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002230616.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3076048 3076488 . + . ID=gene2797;Name=DJ40_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14050;old_locus_tag=DJ40_2770 NZ_CP008943.1 Protein Homology CDS 3076048 3076488 . + 0 ID=cds2711;Parent=gene2797;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3076488 3078308 . + . ID=gene2798;Name=DJ40_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14055;old_locus_tag=DJ40_2771 NZ_CP008943.1 Protein Homology CDS 3076488 3078308 . + 0 ID=cds2712;Parent=gene2798;Dbxref=Genbank:WP_024063064.1;Name=WP_024063064.1;gbkey=CDS;product=type VI secretion system protein;protein_id=WP_024063064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3078272 3079360 . + . ID=gene2799;Name=DJ40_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14060;old_locus_tag=DJ40_2772 NZ_CP008943.1 Protein Homology CDS 3078272 3079360 . + 0 ID=cds2713;Parent=gene2799;Dbxref=Genbank:WP_002213885.1;Name=WP_002213885.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002213885.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3079486 3080802 . + . ID=gene2800;Name=DJ40_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14065;old_locus_tag=DJ40_2773 NZ_CP008943.1 Protein Homology CDS 3079486 3080802 . + 0 ID=cds2714;Parent=gene2800;Dbxref=Genbank:WP_024063062.1;Name=WP_024063062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063062.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3080802 3081347 . + . ID=gene2801;Name=DJ40_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14070;old_locus_tag=DJ40_2774 NZ_CP008943.1 Protein Homology CDS 3080802 3081347 . + 0 ID=cds2715;Parent=gene2801;Dbxref=Genbank:WP_012104358.1;Name=WP_012104358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104358.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3081350 3082696 . + . ID=gene2802;Name=DJ40_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14075;old_locus_tag=DJ40_2775 NZ_CP008943.1 Protein Homology CDS 3081350 3082696 . + 0 ID=cds2716;Parent=gene2802;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3082711 3083463 . + . ID=gene2803;Name=DJ40_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14080;old_locus_tag=DJ40_2776 NZ_CP008943.1 Protein Homology CDS 3082711 3083463 . + 0 ID=cds2717;Parent=gene2803;Dbxref=Genbank:WP_042592867.1;Name=WP_042592867.1;gbkey=CDS;product=membrane protein;protein_id=WP_042592867.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3083474 3086077 . + . ID=gene2804;Name=DJ40_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14085;old_locus_tag=DJ40_2777 NZ_CP008943.1 Protein Homology CDS 3083474 3086077 . + 0 ID=cds2718;Parent=gene2804;Dbxref=Genbank:WP_038400773.1;Name=WP_038400773.1;gbkey=CDS;product=Clp protease ClpV;protein_id=WP_038400773.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3086074 3086871 . + . ID=gene2805;Name=DJ40_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14090;old_locus_tag=DJ40_2778 NZ_CP008943.1 Protein Homology CDS 3086074 3086871 . + 0 ID=cds2719;Parent=gene2805;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3086868 3087554 . + . ID=gene2806;Name=DJ40_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14095;old_locus_tag=DJ40_2779 NZ_CP008943.1 Protein Homology CDS 3086868 3087554 . + 0 ID=cds2720;Parent=gene2806;Dbxref=Genbank:WP_038400774.1;Name=WP_038400774.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038400774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3087560 3088948 . + . ID=gene2807;Name=DJ40_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14100;old_locus_tag=DJ40_2780 NZ_CP008943.1 Protein Homology CDS 3087560 3088948 . + 0 ID=cds2721;Parent=gene2807;Dbxref=Genbank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212110.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3088980 3092513 . + . ID=gene2808;Name=DJ40_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14105;old_locus_tag=DJ40_2781 NZ_CP008943.1 Protein Homology CDS 3088980 3092513 . + 0 ID=cds2722;Parent=gene2808;Dbxref=Genbank:WP_012104359.1;Name=WP_012104359.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_012104359.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3092638 3093951 . + . ID=gene2809;Name=DJ40_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14110;old_locus_tag=DJ40_2782 NZ_CP008943.1 Protein Homology CDS 3092638 3093951 . + 0 ID=cds2723;Parent=gene2809;Dbxref=Genbank:WP_011193197.1;Name=WP_011193197.1;gbkey=CDS;product=membrane protein;protein_id=WP_011193197.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3093719 3100513 . + . ID=id210;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3093973 3096192 . + . ID=gene2810;Name=DJ40_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14115;old_locus_tag=DJ40_2783 NZ_CP008943.1 Protein Homology CDS 3093973 3096192 . + 0 ID=cds2724;Parent=gene2810;Dbxref=Genbank:WP_038400775.1;Name=WP_038400775.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_038400775.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3096198 3096656 . + . ID=gene2811;Name=DJ40_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14120;old_locus_tag=DJ40_2784 NZ_CP008943.1 Protein Homology CDS 3096198 3096656 . + 0 ID=cds2725;Parent=gene2811;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3096649 3099510 . + . ID=gene2812;Name=DJ40_RS14125;end_range=3099510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14125;old_locus_tag=DJ40_2785;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3096649 3099510 . + 0 ID=cds2726;Parent=gene2812;end_range=3099510,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3100895 3101545 . + . ID=gene2813;Name=DJ40_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14130;old_locus_tag=DJ40_2786 NZ_CP008943.1 Protein Homology CDS 3100895 3101545 . + 0 ID=cds2727;Parent=gene2813;Dbxref=Genbank:WP_048901874.1;Name=WP_048901874.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_048901874.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3101605 3101958 . - . ID=gene2814;Name=DJ40_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14135;old_locus_tag=DJ40_2787 NZ_CP008943.1 Protein Homology CDS 3101605 3101958 . - 0 ID=cds2728;Parent=gene2814;Dbxref=Genbank:WP_011193193.1;Name=WP_011193193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193193.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3101614 3102040 . + . ID=id211;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3101955 3102179 . - . ID=gene2815;Name=DJ40_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14140;old_locus_tag=DJ40_2788 NZ_CP008943.1 Protein Homology CDS 3101955 3102179 . - 0 ID=cds2729;Parent=gene2815;Dbxref=Genbank:WP_038400777.1;Name=WP_038400777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400777.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3102261 3102668 . - . ID=gene2816;Name=DJ40_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14145;old_locus_tag=DJ40_2789 NZ_CP008943.1 Protein Homology CDS 3102261 3102668 . - 0 ID=cds2730;Parent=gene2816;Dbxref=Genbank:WP_002210018.1;Name=WP_002210018.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210018.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3102775 3109572 . + . ID=id212;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3103029 3105251 . + . ID=gene2817;Name=DJ40_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14155;old_locus_tag=DJ40_2791 NZ_CP008943.1 Protein Homology CDS 3103029 3105251 . + 0 ID=cds2731;Parent=gene2817;Dbxref=Genbank:WP_038400778.1;Name=WP_038400778.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_038400778.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3105257 3105715 . + . ID=gene2818;Name=DJ40_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14160;old_locus_tag=DJ40_2792 NZ_CP008943.1 Protein Homology CDS 3105257 3105715 . + 0 ID=cds2732;Parent=gene2818;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3105708 3108569 . + . ID=gene2819;Name=DJ40_RS14165;end_range=3108569,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14165;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3105708 3108569 . + 0 ID=cds2733;Parent=gene2819;end_range=3108569,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3108600 3109589 . + . ID=gene2820;Name=DJ40_RS14170;end_range=3109589,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14170;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3108600 3109589 . + 0 ID=cds2734;Parent=gene2820;end_range=3109589,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3109883 3110302 . + . ID=gene2821;Name=DJ40_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21915;old_locus_tag=DJ40_2794 NZ_CP008943.1 Protein Homology CDS 3109883 3110302 . + 0 ID=cds2735;Parent=gene2821;Dbxref=Genbank:WP_012303459.1;Name=WP_012303459.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303459.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3110586 3110831 . + . ID=gene2822;Name=DJ40_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14180;old_locus_tag=DJ40_2795 NZ_CP008943.1 Protein Homology CDS 3110586 3110831 . + 0 ID=cds2736;Parent=gene2822;Dbxref=Genbank:WP_012303460.1;Name=WP_012303460.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303460.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3110831 3111319 . + . ID=gene2823;Name=DJ40_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14185;old_locus_tag=DJ40_2796 NZ_CP008943.1 Protein Homology CDS 3110831 3111319 . + 0 ID=cds2737;Parent=gene2823;Dbxref=Genbank:WP_038401712.1;Name=WP_038401712.1;gbkey=CDS;product=phosphotriesterase;protein_id=WP_038401712.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3111365 3111727 . - . ID=gene2824;Name=DJ40_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14190;old_locus_tag=DJ40_2797 NZ_CP008943.1 Protein Homology CDS 3111365 3111727 . - 0 ID=cds2738;Parent=gene2824;Dbxref=Genbank:WP_012303462.1;Name=WP_012303462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303462.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3111383 3111809 . + . ID=id213;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3112087 3115266 . + . ID=gene2825;Name=DJ40_RS14195;end_range=3115266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14195;old_locus_tag=DJ40_2799;partial=true;pseudo=true;start_range=.,3112087 NZ_CP008943.1 Protein Homology CDS 3112087 3115266 . + 0 ID=cds2739;Parent=gene2825;end_range=3115266,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3112087;transl_table=11 NZ_CP008943.1 RefSeq gene 3115602 3116000 . + . ID=gene2826;Name=DJ40_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14200;old_locus_tag=DJ40_2800 NZ_CP008943.1 Protein Homology CDS 3115602 3116000 . + 0 ID=cds2740;Parent=gene2826;Dbxref=Genbank:WP_038400779.1;Name=WP_038400779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400779.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3116052 3116390 . - . ID=gene2827;Name=DJ40_RS21920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21920;pseudo=true NZ_CP008943.1 Protein Homology CDS 3116052 3116390 . - 0 ID=cds2741;Parent=gene2827;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3116121..3116123)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3116176 3116318 . + . ID=id214;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3116409 3117308 . - . ID=gene2828;Name=DJ40_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14210;old_locus_tag=DJ40_2801 NZ_CP008943.1 Protein Homology CDS 3116409 3117308 . - 0 ID=cds2742;Parent=gene2828;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3117305 3118435 . - . ID=gene2829;Name=DJ40_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14215;old_locus_tag=DJ40_2802 NZ_CP008943.1 Protein Homology CDS 3117305 3118435 . - 0 ID=cds2743;Parent=gene2829;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3118705 3119571 . + . ID=gene2830;Name=DJ40_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14220;old_locus_tag=DJ40_2803 NZ_CP008943.1 Protein Homology CDS 3118705 3119571 . + 0 ID=cds2744;Parent=gene2830;Dbxref=Genbank:WP_012303467.1;Name=WP_012303467.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_012303467.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3119731 3120234 . - . ID=gene2831;Name=DJ40_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14225;old_locus_tag=DJ40_2804 NZ_CP008943.1 Protein Homology CDS 3119731 3120234 . - 0 ID=cds2745;Parent=gene2831;Dbxref=Genbank:WP_011193187.1;Name=WP_011193187.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_011193187.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3120240 3121169 . - . ID=gene2832;Name=DJ40_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14230;old_locus_tag=DJ40_2805 NZ_CP008943.1 Protein Homology CDS 3120240 3121169 . - 0 ID=cds2746;Parent=gene2832;Dbxref=Genbank:WP_038400780.1;Name=WP_038400780.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_038400780.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3121326 3122027 . - . ID=gene2833;Name=DJ40_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14235;old_locus_tag=DJ40_2806 NZ_CP008943.1 Protein Homology CDS 3121326 3122027 . - 0 ID=cds2747;Parent=gene2833;Dbxref=Genbank:WP_011193185.1;Name=WP_011193185.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_011193185.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3122500 3123081 . + . ID=gene2834;Name=DJ40_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14240;old_locus_tag=DJ40_2807 NZ_CP008943.1 Protein Homology CDS 3122500 3123081 . + 0 ID=cds2748;Parent=gene2834;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3123096 3124232 . + . ID=gene2835;Name=DJ40_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14245;old_locus_tag=DJ40_2808 NZ_CP008943.1 Protein Homology CDS 3123096 3124232 . + 0 ID=cds2749;Parent=gene2835;Dbxref=Genbank:WP_038400781.1;Name=WP_038400781.1;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_038400781.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3124251 3125399 . + . ID=gene2836;Name=DJ40_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14250;old_locus_tag=DJ40_2809 NZ_CP008943.1 Protein Homology CDS 3124251 3125399 . + 0 ID=cds2750;Parent=gene2836;Dbxref=Genbank:WP_011193183.1;Name=WP_011193183.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_011193183.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3125411 3126205 . + . ID=gene2837;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=DJ40_RS14255;old_locus_tag=DJ40_2810 NZ_CP008943.1 Protein Homology CDS 3125411 3126205 . + 0 ID=cds2751;Parent=gene2837;Dbxref=Genbank:WP_002213853.1;Name=WP_002213853.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_002213853.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3126202 3127017 . + . ID=gene2838;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=DJ40_RS14260;old_locus_tag=DJ40_2811 NZ_CP008943.1 Protein Homology CDS 3126202 3127017 . + 0 ID=cds2752;Parent=gene2838;Dbxref=Genbank:WP_011193182.1;Name=WP_011193182.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_011193182.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3127391 3127558 . + . ID=id215;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3127636 3127893 . - . ID=gene2839;Name=DJ40_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14265 NZ_CP008943.1 Protein Homology CDS 3127636 3127893 . - 0 ID=cds2753;Parent=gene2839;Dbxref=Genbank:WP_012104378.1;Name=WP_012104378.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_012104378.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3128293 3129648 . + . ID=gene2840;Name=DJ40_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14270;old_locus_tag=DJ40_2813 NZ_CP008943.1 Protein Homology CDS 3128293 3129648 . + 0 ID=cds2754;Parent=gene2840;Dbxref=Genbank:WP_002210039.1;Name=WP_002210039.1;gbkey=CDS;product=xanthine/uracil permease;protein_id=WP_002210039.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3129997 3131646 . + . ID=gene2841;Name=DJ40_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14275;old_locus_tag=DJ40_2814 NZ_CP008943.1 Protein Homology CDS 3129997 3131646 . + 0 ID=cds2755;Parent=gene2841;Dbxref=Genbank:WP_002215816.1;Name=WP_002215816.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002215816.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3131865 3133052 . - . ID=gene2842;Name=DJ40_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14280;old_locus_tag=DJ40_2815 NZ_CP008943.1 Protein Homology CDS 3131865 3133052 . - 0 ID=cds2756;Parent=gene2842;Dbxref=Genbank:WP_038400782.1;Name=WP_038400782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400782.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3133204 3134124 . - . ID=gene2843;Name=DJ40_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14285;old_locus_tag=DJ40_2816 NZ_CP008943.1 Protein Homology CDS 3133204 3134124 . - 0 ID=cds2757;Parent=gene2843;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3134930 3135919 . + . ID=gene2844;Name=DJ40_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14290;old_locus_tag=DJ40_2817 NZ_CP008943.1 Protein Homology CDS 3134930 3135919 . + 0 ID=cds2758;Parent=gene2844;Dbxref=Genbank:WP_012104382.1;Name=WP_012104382.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_012104382.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3136123 3137619 . + . ID=gene2845;Name=DJ40_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14295;old_locus_tag=DJ40_2818 NZ_CP008943.1 Protein Homology CDS 3136123 3137619 . + 0 ID=cds2759;Parent=gene2845;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3137612 3138601 . + . ID=gene2846;Name=DJ40_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14300;old_locus_tag=DJ40_2819 NZ_CP008943.1 Protein Homology CDS 3137612 3138601 . + 0 ID=cds2760;Parent=gene2846;Dbxref=Genbank:WP_002210045.1;Name=WP_002210045.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3138603 3139556 . + . ID=gene2847;Name=DJ40_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14305;old_locus_tag=DJ40_2820 NZ_CP008943.1 Protein Homology CDS 3138603 3139556 . + 0 ID=cds2761;Parent=gene2847;Dbxref=Genbank:WP_038400783.1;Name=WP_038400783.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038400783.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3139575 3141212 . + . ID=gene2848;Name=DJ40_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14310;old_locus_tag=DJ40_2821 NZ_CP008943.1 Protein Homology CDS 3139575 3141212 . + 0 ID=cds2762;Parent=gene2848;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3141209 3141814 . + . ID=gene2849;Name=DJ40_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14315;old_locus_tag=DJ40_2822 NZ_CP008943.1 Protein Homology CDS 3141209 3141814 . + 0 ID=cds2763;Parent=gene2849;Dbxref=Genbank:WP_011193177.1;Name=WP_011193177.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_011193177.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3141913 3142764 . - . ID=gene2850;Name=DJ40_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14320;old_locus_tag=DJ40_2823 NZ_CP008943.1 Protein Homology CDS 3141913 3142764 . - 0 ID=cds2764;Parent=gene2850;Dbxref=Genbank:WP_038400784.1;Name=WP_038400784.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_038400784.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3143018 3144364 . + . ID=gene2851;Name=DJ40_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14325;old_locus_tag=DJ40_2824 NZ_CP008943.1 Protein Homology CDS 3143018 3144364 . + 0 ID=cds2765;Parent=gene2851;Dbxref=Genbank:WP_011193175.1;Name=WP_011193175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193175.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3144516 3145691 . - . ID=gene2852;Name=DJ40_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14330;old_locus_tag=DJ40_2825 NZ_CP008943.1 Protein Homology CDS 3144516 3145691 . - 0 ID=cds2766;Parent=gene2852;Dbxref=Genbank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_002210051.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3145734 3145991 . - . ID=gene2853;Name=DJ40_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14335 NZ_CP008943.1 GeneMarkS+ CDS 3145734 3145991 . - 0 ID=cds2767;Parent=gene2853;Dbxref=Genbank:WP_032466796.1;Name=WP_032466796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466796.1;transl_table=11 NZ_CP008943.1 cmsearch region 3146000 3146413 . - . ID=id216;Note=cspA;gbkey=misc_feature NZ_CP008943.1 RefSeq gene 3146027 3146239 . - . ID=gene2854;Name=DJ40_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14340;old_locus_tag=DJ40_2826 NZ_CP008943.1 Protein Homology CDS 3146027 3146239 . - 0 ID=cds2768;Parent=gene2854;Dbxref=Genbank:WP_038400785.1;Name=WP_038400785.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_038400785.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3146055 3147201 . + . ID=id217;gbkey=repeat_region NZ_CP008943.1 cmsearch region 3146448 3146885 . - . ID=id218;Note=cspA;gbkey=misc_feature NZ_CP008943.1 RefSeq gene 3146499 3146711 . - . ID=gene2855;Name=DJ40_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14345;old_locus_tag=DJ40_2827 NZ_CP008943.1 Protein Homology CDS 3146499 3146711 . - 0 ID=cds2769;Parent=gene2855;Dbxref=Genbank:WP_011193172.1;Name=WP_011193172.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_011193172.1;transl_table=11 NZ_CP008943.1 cmsearch region 3146920 3147362 . - . ID=id219;Note=cspA;gbkey=misc_feature NZ_CP008943.1 RefSeq gene 3146971 3147183 . - . ID=gene2856;Name=DJ40_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14350;old_locus_tag=DJ40_2828 NZ_CP008943.1 Protein Homology CDS 3146971 3147183 . - 0 ID=cds2770;Parent=gene2856;Dbxref=Genbank:WP_011193172.1;Name=WP_011193172.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_011193172.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3147276 3147425 . - . ID=gene2857;Name=DJ40_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14355 NZ_CP008943.1 Protein Homology CDS 3147276 3147425 . - 0 ID=cds2771;Parent=gene2857;Dbxref=Genbank:WP_002374696.1;Name=WP_002374696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002374696.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3147428 3147613 . + . ID=gene2858;Name=DJ40_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14360 NZ_CP008943.1 Protein Homology CDS 3147428 3147613 . + 0 ID=cds2772;Parent=gene2858;Dbxref=Genbank:WP_032466781.1;Name=WP_032466781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466781.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3147717 3148184 . - . ID=gene2859;Name=DJ40_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14365;old_locus_tag=DJ40_2829 NZ_CP008943.1 Protein Homology CDS 3147717 3148184 . - 0 ID=cds2773;Parent=gene2859;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3148660 3149472 . + . ID=gene2860;Name=DJ40_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14370;old_locus_tag=DJ40_2830 NZ_CP008943.1 Protein Homology CDS 3148660 3149472 . + 0 ID=cds2774;Parent=gene2860;Dbxref=Genbank:WP_012104386.1;Name=WP_012104386.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_012104386.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3149537 3150427 . + . ID=gene2861;Name=DJ40_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14375;old_locus_tag=DJ40_2831 NZ_CP008943.1 Protein Homology CDS 3149537 3150427 . + 0 ID=cds2775;Parent=gene2861;Dbxref=Genbank:WP_038400786.1;Name=WP_038400786.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_038400786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3150605 3151000 . + . ID=gene2862;Name=DJ40_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14380;old_locus_tag=DJ40_2832 NZ_CP008943.1 Protein Homology CDS 3150605 3151000 . + 0 ID=cds2776;Parent=gene2862;Dbxref=Genbank:WP_011193169.1;Name=WP_011193169.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_011193169.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3151154 3152518 . + . ID=gene2863;Name=DJ40_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14385;old_locus_tag=DJ40_2833 NZ_CP008943.1 Protein Homology CDS 3151154 3152518 . + 0 ID=cds2777;Parent=gene2863;Dbxref=Genbank:WP_032466779.1;Name=WP_032466779.1;gbkey=CDS;product=MFS transporter;protein_id=WP_032466779.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3152608 3153282 . + . ID=gene2864;Name=DJ40_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14390;old_locus_tag=DJ40_2834 NZ_CP008943.1 Protein Homology CDS 3152608 3153282 . + 0 ID=cds2778;Parent=gene2864;Dbxref=Genbank:WP_011193167.1;Name=WP_011193167.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_011193167.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3153348 3153824 . + . ID=gene2865;Name=DJ40_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14395;old_locus_tag=DJ40_2835 NZ_CP008943.1 Protein Homology CDS 3153348 3153824 . + 0 ID=cds2779;Parent=gene2865;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3153984 3154466 . + . ID=id220;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3154578 3154874 . - . ID=gene2866;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=DJ40_RS14400;old_locus_tag=DJ40_2836 NZ_CP008943.1 Protein Homology CDS 3154578 3154874 . - 0 ID=cds2780;Parent=gene2866;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3154899 3155864 . - . ID=gene2867;Name=DJ40_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14405;old_locus_tag=DJ40_2837 NZ_CP008943.1 Protein Homology CDS 3154899 3155864 . - 0 ID=cds2781;Parent=gene2867;Dbxref=Genbank:WP_038400787.1;Name=WP_038400787.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_038400787.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3156470 3157351 . - . ID=gene2868;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=DJ40_RS14410;old_locus_tag=DJ40_2838 NZ_CP008943.1 Protein Homology CDS 3156470 3157351 . - 0 ID=cds2782;Parent=gene2868;Dbxref=Genbank:WP_002220963.1;Name=WP_002220963.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3157427 3158881 . - . ID=gene2869;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=DJ40_RS14415;old_locus_tag=DJ40_2839 NZ_CP008943.1 Protein Homology CDS 3157427 3158881 . - 0 ID=cds2783;Parent=gene2869;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3158871 3159113 . - . ID=gene2870;Name=DJ40_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14420;old_locus_tag=DJ40_2840 NZ_CP008943.1 Protein Homology CDS 3158871 3159113 . - 0 ID=cds2784;Parent=gene2870;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3159128 3159551 . + . ID=id221;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3160595 3161944 . - . ID=gene2871;Name=DJ40_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14425;old_locus_tag=DJ40_2842 NZ_CP008943.1 Protein Homology CDS 3160595 3161944 . - 0 ID=cds2785;Parent=gene2871;Dbxref=Genbank:WP_038400788.1;Name=WP_038400788.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase;protein_id=WP_038400788.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3161956 3162420 . - . ID=gene2872;Name=DJ40_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14430;old_locus_tag=DJ40_2843 NZ_CP008943.1 Protein Homology CDS 3161956 3162420 . - 0 ID=cds2786;Parent=gene2872;Dbxref=Genbank:WP_002230506.1;Name=WP_002230506.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_002230506.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3162578 3163030 . - . ID=gene2873;Name=DJ40_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14435;old_locus_tag=DJ40_2844 NZ_CP008943.1 Protein Homology CDS 3162578 3163030 . - 0 ID=cds2787;Parent=gene2873;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3163292 3163912 . - . ID=gene2874;Name=DJ40_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14440;old_locus_tag=DJ40_2845 NZ_CP008943.1 Protein Homology CDS 3163292 3163912 . - 0 ID=cds2788;Parent=gene2874;Dbxref=Genbank:WP_002210072.1;Name=WP_002210072.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_002210072.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3163912 3165012 . - . ID=gene2875;Name=DJ40_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14445;old_locus_tag=DJ40_2846 NZ_CP008943.1 Protein Homology CDS 3163912 3165012 . - 0 ID=cds2789;Parent=gene2875;Dbxref=Genbank:WP_038400789.1;Name=WP_038400789.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=TMAO/DMSO reductase;protein_id=WP_038400789.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3165235 3166212 . - . ID=gene2876;Name=DJ40_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14450;old_locus_tag=DJ40_2847 NZ_CP008943.1 Protein Homology CDS 3165235 3166212 . - 0 ID=cds2790;Parent=gene2876;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3166613 3168529 . + . ID=gene2877;Name=DJ40_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14455;old_locus_tag=DJ40_2848 NZ_CP008943.1 Protein Homology CDS 3166613 3168529 . + 0 ID=cds2791;Parent=gene2877;Dbxref=Genbank:WP_002210075.1;Name=WP_002210075.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210075.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3168866 3169909 . + . ID=gene2878;Name=DJ40_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14460;old_locus_tag=DJ40_2849 NZ_CP008943.1 Protein Homology CDS 3168866 3169909 . + 0 ID=cds2792;Parent=gene2878;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3170114 3171109 . + . ID=gene2879;Name=DJ40_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14465;old_locus_tag=DJ40_2850 NZ_CP008943.1 Protein Homology CDS 3170114 3171109 . + 0 ID=cds2793;Parent=gene2879;Dbxref=Genbank:WP_038400790.1;Name=WP_038400790.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_038400790.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3171106 3171594 . + . ID=gene2880;Name=DJ40_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14470;old_locus_tag=DJ40_2851 NZ_CP008943.1 Protein Homology CDS 3171106 3171594 . + 0 ID=cds2794;Parent=gene2880;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3171608 3172201 . + . ID=gene2881;Name=DJ40_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14475;old_locus_tag=DJ40_2852 NZ_CP008943.1 Protein Homology CDS 3171608 3172201 . + 0 ID=cds2795;Parent=gene2881;Dbxref=Genbank:WP_033850803.1;Name=WP_033850803.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_033850803.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3172191 3173660 . + . ID=gene2882;Name=DJ40_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14480;old_locus_tag=DJ40_2853 NZ_CP008943.1 Protein Homology CDS 3172191 3173660 . + 0 ID=cds2796;Parent=gene2882;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3173775 3177678 . + . ID=gene2883;Name=DJ40_RS14485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14485;pseudo=true NZ_CP008943.1 Protein Homology CDS 3173775 3177678 . + 0 ID=cds2797;Parent=gene2883;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3177675 3178544 . + . ID=gene2884;Name=DJ40_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14490;old_locus_tag=DJ40_2856 NZ_CP008943.1 Protein Homology CDS 3177675 3178544 . + 0 ID=cds2798;Parent=gene2884;Dbxref=Genbank:WP_002210081.1;Name=WP_002210081.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_002210081.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3178556 3180001 . + . ID=gene2885;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=DJ40_RS14495;old_locus_tag=DJ40_2857 NZ_CP008943.1 Protein Homology CDS 3178556 3180001 . + 0 ID=cds2799;Parent=gene2885;Dbxref=Genbank:WP_002210082.1;Name=WP_002210082.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_002210082.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3180981 3183113 . - . ID=gene2886;Name=DJ40_RS14500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14500;partial=true;pseudo=true;start_range=.,3180981 NZ_CP008943.1 Protein Homology CDS 3180981 3183113 . - 0 ID=cds2800;Parent=gene2886;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=toxin;pseudo=true;start_range=.,3180981;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3181111 3183082 . + . ID=id222;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3183870 3185873 . - . ID=gene2887;Name=DJ40_RS14505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14505;partial=true;pseudo=true;start_range=.,3183870 NZ_CP008943.1 Protein Homology CDS 3183870 3185873 . - 0 ID=cds2801;Parent=gene2887;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=toxin;pseudo=true;start_range=.,3183870;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3183871 3185842 . + . ID=id223;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3186118 3186477 . - . ID=gene2888;Name=DJ40_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14510;old_locus_tag=DJ40_2860 NZ_CP008943.1 Protein Homology CDS 3186118 3186477 . - 0 ID=cds2802;Parent=gene2888;Dbxref=Genbank:WP_012104402.1;Name=WP_012104402.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104402.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3186474 3186875 . - . ID=gene2889;Name=DJ40_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14515;old_locus_tag=DJ40_2861 NZ_CP008943.1 Protein Homology CDS 3186474 3186875 . - 0 ID=cds2803;Parent=gene2889;Dbxref=Genbank:WP_012303481.1;Name=WP_012303481.1;gbkey=CDS;product=peptidase M15;protein_id=WP_012303481.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3186888 3187190 . - . ID=gene2890;Name=DJ40_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14520;old_locus_tag=DJ40_2862 NZ_CP008943.1 Protein Homology CDS 3186888 3187190 . - 0 ID=cds2804;Parent=gene2890;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3187324 3191841 . - . ID=gene2891;Name=DJ40_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14525;old_locus_tag=DJ40_2863 NZ_CP008943.1 Protein Homology CDS 3187324 3191841 . - 0 ID=cds2805;Parent=gene2891;Dbxref=Genbank:WP_038400791.1;Name=WP_038400791.1;gbkey=CDS;product=toxin;protein_id=WP_038400791.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3191899 3195484 . - . ID=gene2892;Name=DJ40_RS14530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14530;old_locus_tag=DJ40_2864;pseudo=true NZ_CP008943.1 Protein Homology CDS 3191899 3195484 . - 0 ID=cds2806;Parent=gene2892;exception=annotated by transcript or proteomic data;gbkey=CDS;product=toxin;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3195528 3197957 . - . ID=gene2893;Name=DJ40_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14535;old_locus_tag=DJ40_2865 NZ_CP008943.1 Protein Homology CDS 3195528 3197957 . - 0 ID=cds2807;Parent=gene2893;Dbxref=Genbank:WP_042592871.1;Name=WP_042592871.1;gbkey=CDS;product=toxin;protein_id=WP_042592871.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3198343 3199209 . - . ID=gene2894;Name=DJ40_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14540;old_locus_tag=DJ40_2866 NZ_CP008943.1 Protein Homology CDS 3198343 3199209 . - 0 ID=cds2808;Parent=gene2894;Dbxref=Genbank:WP_038400793.1;Name=WP_038400793.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_038400793.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3199470 3200381 . - . ID=gene2895;Name=DJ40_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14545;old_locus_tag=DJ40_2867 NZ_CP008943.1 Protein Homology CDS 3199470 3200381 . - 0 ID=cds2809;Parent=gene2895;Dbxref=Genbank:WP_011193155.1;Name=WP_011193155.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011193155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3200684 3200887 . + . ID=gene2896;Name=DJ40_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14550;old_locus_tag=DJ40_2868 NZ_CP008943.1 Protein Homology CDS 3200684 3200887 . + 0 ID=cds2810;Parent=gene2896;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3200895 3201830 . + . ID=gene2897;Name=DJ40_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14555;old_locus_tag=DJ40_2869 NZ_CP008943.1 Protein Homology CDS 3200895 3201830 . + 0 ID=cds2811;Parent=gene2897;Dbxref=Genbank:WP_002210094.1;Name=WP_002210094.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3201832 3203787 . + . ID=gene2898;Name=DJ40_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14560;old_locus_tag=DJ40_2870 NZ_CP008943.1 Protein Homology CDS 3201832 3203787 . + 0 ID=cds2812;Parent=gene2898;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3204054 3205187 . + . ID=gene2899;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=DJ40_RS14565;old_locus_tag=DJ40_2871 NZ_CP008943.1 Protein Homology CDS 3204054 3205187 . + 0 ID=cds2813;Parent=gene2899;Dbxref=Genbank:WP_038400794.1;Name=WP_038400794.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_038400794.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3205184 3205522 . + . ID=gene2900;Name=DJ40_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14570;old_locus_tag=DJ40_2872 NZ_CP008943.1 Protein Homology CDS 3205184 3205522 . + 0 ID=cds2814;Parent=gene2900;Dbxref=Genbank:WP_002214289.1;Name=WP_002214289.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002214289.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3205717 3206190 . + . ID=gene2901;Name=DJ40_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14575 NZ_CP008943.1 Protein Homology CDS 3205717 3206190 . + 0 ID=cds2815;Parent=gene2901;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3206195 3206476 . + . ID=gene2902;Name=DJ40_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14580;old_locus_tag=DJ40_2875 NZ_CP008943.1 Protein Homology CDS 3206195 3206476 . + 0 ID=cds2816;Parent=gene2902;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3206604 3207152 . - . ID=gene2903;Name=DJ40_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14585;old_locus_tag=DJ40_2876 NZ_CP008943.1 Protein Homology CDS 3206604 3207152 . - 0 ID=cds2817;Parent=gene2903;Dbxref=Genbank:WP_011193153.1;Name=WP_011193153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193153.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3207333 3208673 . + . ID=gene2904;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=DJ40_RS14590;old_locus_tag=DJ40_2877 NZ_CP008943.1 Protein Homology CDS 3207333 3208673 . + 0 ID=cds2818;Parent=gene2904;Dbxref=Genbank:WP_038400795.1;Name=WP_038400795.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_038400795.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3208797 3209441 . + . ID=gene2905;Name=DJ40_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14595;old_locus_tag=DJ40_2878 NZ_CP008943.1 Protein Homology CDS 3208797 3209441 . + 0 ID=cds2819;Parent=gene2905;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3209649 3210035 . + . ID=gene2906;Name=DJ40_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14600;old_locus_tag=DJ40_2879 NZ_CP008943.1 Protein Homology CDS 3209649 3210035 . + 0 ID=cds2820;Parent=gene2906;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3210301 3210711 . - . ID=gene2907;Name=DJ40_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14605;old_locus_tag=DJ40_2880 NZ_CP008943.1 Protein Homology CDS 3210301 3210711 . - 0 ID=cds2821;Parent=gene2907;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3211064 3212731 . - . ID=gene2908;Name=DJ40_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14610;old_locus_tag=DJ40_2881 NZ_CP008943.1 Protein Homology CDS 3211064 3212731 . - 0 ID=cds2822;Parent=gene2908;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3212826 3214241 . - . ID=gene2909;Name=DJ40_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14615;old_locus_tag=DJ40_2882 NZ_CP008943.1 Protein Homology CDS 3212826 3214241 . - 0 ID=cds2823;Parent=gene2909;Dbxref=Genbank:WP_011193151.1;Name=WP_011193151.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_011193151.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3214652 3215605 . - . ID=gene2910;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=DJ40_RS14620;old_locus_tag=DJ40_2883 NZ_CP008943.1 Protein Homology CDS 3214652 3215605 . - 0 ID=cds2824;Parent=gene2910;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3215839 3216315 . - . ID=gene2911;Name=DJ40_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14625;old_locus_tag=DJ40_2884 NZ_CP008943.1 Protein Homology CDS 3215839 3216315 . - 0 ID=cds2825;Parent=gene2911;Dbxref=Genbank:WP_038400796.1;Name=WP_038400796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400796.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3216614 3217000 . - . ID=gene2912;Name=DJ40_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14630;old_locus_tag=DJ40_2885 NZ_CP008943.1 Protein Homology CDS 3216614 3217000 . - 0 ID=cds2826;Parent=gene2912;Dbxref=Genbank:WP_011193150.1;Name=WP_011193150.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_011193150.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3217138 3217602 . - . ID=gene2913;Name=DJ40_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14635;old_locus_tag=DJ40_2886 NZ_CP008943.1 Protein Homology CDS 3217138 3217602 . - 0 ID=cds2827;Parent=gene2913;Dbxref=Genbank:WP_012104412.1;Name=WP_012104412.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_012104412.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3217614 3218549 . - . ID=gene2914;Name=DJ40_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14640;old_locus_tag=DJ40_2887 NZ_CP008943.1 Protein Homology CDS 3217614 3218549 . - 0 ID=cds2828;Parent=gene2914;Dbxref=Genbank:WP_012104413.1;Name=WP_012104413.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_012104413.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3218887 3219159 . - . ID=gene2915;Name=DJ40_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14645;old_locus_tag=DJ40_2888 NZ_CP008943.1 Protein Homology CDS 3218887 3219159 . - 0 ID=cds2829;Parent=gene2915;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3219156 3220010 . - . ID=gene2916;Name=DJ40_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14650;old_locus_tag=DJ40_2889 NZ_CP008943.1 Protein Homology CDS 3219156 3220010 . - 0 ID=cds2830;Parent=gene2916;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3220279 3220761 . - . ID=gene2917;Name=DJ40_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14655;old_locus_tag=DJ40_2890 NZ_CP008943.1 Protein Homology CDS 3220279 3220761 . - 0 ID=cds2831;Parent=gene2917;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3220879 3221166 . - . ID=gene2918;Name=DJ40_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14660;old_locus_tag=DJ40_2891 NZ_CP008943.1 Protein Homology CDS 3220879 3221166 . - 0 ID=cds2832;Parent=gene2918;Dbxref=Genbank:WP_004392031.1;Name=WP_004392031.1;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=ribosome hibernation promoting factor HPF;protein_id=WP_004392031.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3221190 3222623 . - . ID=gene2919;Name=DJ40_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14665;old_locus_tag=DJ40_2892 NZ_CP008943.1 Protein Homology CDS 3221190 3222623 . - 0 ID=cds2833;Parent=gene2919;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3222685 3223410 . - . ID=gene2920;Name=DJ40_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14670;old_locus_tag=DJ40_2893 NZ_CP008943.1 Protein Homology CDS 3222685 3223410 . - 0 ID=cds2834;Parent=gene2920;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3223417 3223962 . - . ID=gene2921;Name=DJ40_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14675;old_locus_tag=DJ40_2894 NZ_CP008943.1 Protein Homology CDS 3223417 3223962 . - 0 ID=cds2835;Parent=gene2921;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3223946 3224509 . - . ID=gene2922;Name=DJ40_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14680;old_locus_tag=DJ40_2895 NZ_CP008943.1 Protein Homology CDS 3223946 3224509 . - 0 ID=cds2836;Parent=gene2922;Dbxref=Genbank:WP_011193147.1;Name=WP_011193147.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011193147.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3224506 3225069 . - . ID=gene2923;Name=DJ40_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14685;old_locus_tag=DJ40_2896 NZ_CP008943.1 Protein Homology CDS 3224506 3225069 . - 0 ID=cds2837;Parent=gene2923;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3225318 3226304 . - . ID=gene2924;Name=DJ40_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14690;old_locus_tag=DJ40_2897 NZ_CP008943.1 Protein Homology CDS 3225318 3226304 . - 0 ID=cds2838;Parent=gene2924;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3226415 3227389 . - . ID=gene2925;Name=DJ40_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14695;old_locus_tag=DJ40_2898 NZ_CP008943.1 Protein Homology CDS 3226415 3227389 . - 0 ID=cds2839;Parent=gene2925;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3227654 3228472 . + . ID=gene2926;Name=DJ40_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14700;old_locus_tag=DJ40_2899 NZ_CP008943.1 Protein Homology CDS 3227654 3228472 . + 0 ID=cds2840;Parent=gene2926;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3228690 3229472 . + . ID=gene2927;Name=DJ40_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14705;old_locus_tag=DJ40_2900 NZ_CP008943.1 Protein Homology CDS 3228690 3229472 . + 0 ID=cds2841;Parent=gene2927;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3229477 3230034 . + . ID=gene2928;Name=DJ40_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14710;old_locus_tag=DJ40_2901 NZ_CP008943.1 Protein Homology CDS 3229477 3230034 . + 0 ID=cds2842;Parent=gene2928;Dbxref=Genbank:WP_011193146.1;Name=WP_011193146.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_011193146.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3230047 3230670 . + . ID=gene2929;Name=DJ40_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14715;old_locus_tag=DJ40_2902 NZ_CP008943.1 Protein Homology CDS 3230047 3230670 . + 0 ID=cds2843;Parent=gene2929;Dbxref=Genbank:WP_038400797.1;Name=WP_038400797.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_038400797.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3230706 3231008 . + . ID=gene2930;Name=DJ40_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14720;old_locus_tag=DJ40_2903 NZ_CP008943.1 Protein Homology CDS 3230706 3231008 . + 0 ID=cds2844;Parent=gene2930;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3231155 3231409 . + . ID=gene2931;Name=DJ40_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14725;old_locus_tag=DJ40_2904 NZ_CP008943.1 Protein Homology CDS 3231155 3231409 . + 0 ID=cds2845;Parent=gene2931;Dbxref=Genbank:WP_012104414.1;Name=WP_012104414.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104414.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3231563 3232825 . + . ID=gene2932;Name=DJ40_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14730;old_locus_tag=DJ40_2905 NZ_CP008943.1 Protein Homology CDS 3231563 3232825 . + 0 ID=cds2846;Parent=gene2932;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3233006 3234094 . - . ID=gene2933;Name=DJ40_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14735;old_locus_tag=DJ40_2906 NZ_CP008943.1 Protein Homology CDS 3233006 3234094 . - 0 ID=cds2847;Parent=gene2933;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3234184 3235557 . - . ID=gene2934;Name=DJ40_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14740;old_locus_tag=DJ40_2907 NZ_CP008943.1 Protein Homology CDS 3234184 3235557 . - 0 ID=cds2848;Parent=gene2934;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3235828 3236232 . - . ID=gene2935;Name=DJ40_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14745;old_locus_tag=DJ40_2908 NZ_CP008943.1 Protein Homology CDS 3235828 3236232 . - 0 ID=cds2849;Parent=gene2935;Dbxref=Genbank:WP_038400798.1;Name=WP_038400798.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit III;protein_id=WP_038400798.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3236456 3237583 . + . ID=gene2936;Name=DJ40_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14750;old_locus_tag=DJ40_2910 NZ_CP008943.1 Protein Homology CDS 3236456 3237583 . + 0 ID=cds2850;Parent=gene2936;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3237897 3238325 . + . ID=gene2937;Name=DJ40_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14755;old_locus_tag=DJ40_2911 NZ_CP008943.1 Protein Homology CDS 3237897 3238325 . + 0 ID=cds2851;Parent=gene2937;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3238340 3238732 . + . ID=gene2938;Name=DJ40_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14760;old_locus_tag=DJ40_2912 NZ_CP008943.1 Protein Homology CDS 3238340 3238732 . + 0 ID=cds2852;Parent=gene2938;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3238729 3238926 . - . ID=gene2939;Name=DJ40_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14765 NZ_CP008943.1 Protein Homology CDS 3238729 3238926 . - 0 ID=cds2853;Parent=gene2939;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3239106 3239747 . + . ID=gene2940;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=DJ40_RS14770;old_locus_tag=DJ40_2913 NZ_CP008943.1 Protein Homology CDS 3239106 3239747 . + 0 ID=cds2854;Parent=gene2940;Dbxref=Genbank:WP_002210135.1;Name=WP_002210135.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_002210135.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3239753 3240268 . + . ID=gene2941;Name=DJ40_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14775;old_locus_tag=DJ40_2914 NZ_CP008943.1 Protein Homology CDS 3239753 3240268 . + 0 ID=cds2855;Parent=gene2941;Dbxref=Genbank:WP_012104417.1;Name=WP_012104417.1;gbkey=CDS;product=peptidase;protein_id=WP_012104417.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3240421 3240906 . - . ID=gene2942;Name=DJ40_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14780;old_locus_tag=DJ40_2915 NZ_CP008943.1 Protein Homology CDS 3240421 3240906 . - 0 ID=cds2856;Parent=gene2942;Dbxref=Genbank:WP_011193144.1;Name=WP_011193144.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193144.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3241281 3241439 . + . ID=id224;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3241506 3242924 . - . ID=gene2943;Name=DJ40_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14785;old_locus_tag=DJ40_2916 NZ_CP008943.1 Protein Homology CDS 3241506 3242924 . - 0 ID=cds2857;Parent=gene2943;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3242934 3247391 . - . ID=gene2944;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=DJ40_RS14790;old_locus_tag=DJ40_2917 NZ_CP008943.1 Protein Homology CDS 3242934 3247391 . - 0 ID=cds2858;Parent=gene2944;Dbxref=Genbank:WP_012303490.1;Name=WP_012303490.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_012303490.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3248214 3249137 . + . ID=gene2945;Name=DJ40_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14795;old_locus_tag=DJ40_2919 NZ_CP008943.1 Protein Homology CDS 3248214 3249137 . + 0 ID=cds2859;Parent=gene2945;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3249172 3249390 . + . ID=gene2946;Name=DJ40_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14800;old_locus_tag=DJ40_2920 NZ_CP008943.1 Protein Homology CDS 3249172 3249390 . + 0 ID=cds2860;Parent=gene2946;Dbxref=Genbank:WP_012303491.1;Name=WP_012303491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303491.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3249421 3251757 . + . ID=gene2947;Name=DJ40_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14805;old_locus_tag=DJ40_2921 NZ_CP008943.1 Protein Homology CDS 3249421 3251757 . + 0 ID=cds2861;Parent=gene2947;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3251775 3251969 . + . ID=gene2948;Name=DJ40_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14810 NZ_CP008943.1 Protein Homology CDS 3251775 3251969 . + 0 ID=cds2862;Parent=gene2948;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3251999 3252652 . + . ID=gene2949;Name=DJ40_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14815;old_locus_tag=DJ40_2922 NZ_CP008943.1 Protein Homology CDS 3251999 3252652 . + 0 ID=cds2863;Parent=gene2949;Dbxref=Genbank:WP_012104420.1;Name=WP_012104420.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_012104420.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3252649 3253374 . + . ID=gene2950;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=DJ40_RS14820;old_locus_tag=DJ40_2923 NZ_CP008943.1 Protein Homology CDS 3252649 3253374 . + 0 ID=cds2864;Parent=gene2950;Dbxref=Genbank:WP_002210144.1;Name=WP_002210144.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_002210144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3253581 3254156 . - . ID=gene2951;Name=DJ40_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14825;old_locus_tag=DJ40_2924 NZ_CP008943.1 Protein Homology CDS 3253581 3254156 . - 0 ID=cds2865;Parent=gene2951;Dbxref=Genbank:WP_011193140.1;Name=WP_011193140.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193140.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3254167 3254757 . - . ID=gene2952;Name=DJ40_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14830;old_locus_tag=DJ40_2925 NZ_CP008943.1 Protein Homology CDS 3254167 3254757 . - 0 ID=cds2866;Parent=gene2952;Dbxref=Genbank:WP_011193139.1;Name=WP_011193139.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_011193139.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3255028 3255381 . - . ID=gene2953;Name=DJ40_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14835;old_locus_tag=DJ40_2926 NZ_CP008943.1 Protein Homology CDS 3255028 3255381 . - 0 ID=cds2867;Parent=gene2953;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3255480 3257453 . - . ID=gene2954;Name=DJ40_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14840;old_locus_tag=DJ40_2927 NZ_CP008943.1 Protein Homology CDS 3255480 3257453 . - 0 ID=cds2868;Parent=gene2954;Dbxref=Genbank:WP_012303495.1;Name=WP_012303495.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_012303495.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3257516 3258415 . + . ID=gene2955;Name=DJ40_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14845;old_locus_tag=DJ40_2928 NZ_CP008943.1 Protein Homology CDS 3257516 3258415 . + 0 ID=cds2869;Parent=gene2955;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3258435 3258813 . + . ID=gene2956;Name=DJ40_RS21955;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=DJ40_RS21955 NZ_CP008943.1 cmsearch ncRNA 3258435 3258813 . + . ID=rna77;Parent=gene2956;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NZ_CP008943.1 cmsearch exon 3258435 3258813 . + . ID=id225;Parent=rna77;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NZ_CP008943.1 RefSeq repeat_region 3258791 3259209 . + . ID=id226;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3259239 3259943 . - . ID=gene2957;Name=DJ40_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14850;old_locus_tag=DJ40_2929 NZ_CP008943.1 Protein Homology CDS 3259239 3259943 . - 0 ID=cds2870;Parent=gene2957;Dbxref=Genbank:WP_038400799.1;Name=WP_038400799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400799.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3260205 3261098 . + . ID=gene2958;Name=DJ40_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14855;old_locus_tag=DJ40_2930 NZ_CP008943.1 Protein Homology CDS 3260205 3261098 . + 0 ID=cds2871;Parent=gene2958;Dbxref=Genbank:WP_038400800.1;Name=WP_038400800.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_038400800.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3261229 3262215 . - . ID=gene2959;Name=DJ40_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14860;old_locus_tag=DJ40_2931 NZ_CP008943.1 Protein Homology CDS 3261229 3262215 . - 0 ID=cds2872;Parent=gene2959;Dbxref=Genbank:WP_011193135.1;Name=WP_011193135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193135.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3262301 3262696 . - . ID=gene2960;Name=DJ40_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14865;old_locus_tag=DJ40_2932 NZ_CP008943.1 Protein Homology CDS 3262301 3262696 . - 0 ID=cds2873;Parent=gene2960;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3263000 3263284 . - . ID=gene2961;Name=DJ40_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14870;old_locus_tag=DJ40_2933 NZ_CP008943.1 Protein Homology CDS 3263000 3263284 . - 0 ID=cds2874;Parent=gene2961;Dbxref=Genbank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002210420.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3263281 3263676 . - . ID=gene2962;Name=DJ40_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14875;old_locus_tag=DJ40_2934 NZ_CP008943.1 Protein Homology CDS 3263281 3263676 . - 0 ID=cds2875;Parent=gene2962;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3263679 3263984 . - . ID=gene2963;Name=DJ40_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14880;old_locus_tag=DJ40_2935 NZ_CP008943.1 Protein Homology CDS 3263679 3263984 . - 0 ID=cds2876;Parent=gene2963;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3263989 3264135 . - . ID=gene2964;Name=DJ40_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14885 NZ_CP008943.1 Protein Homology CDS 3263989 3264135 . - 0 ID=cds2877;Parent=gene2964;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3264139 3264519 . - . ID=gene2965;Name=DJ40_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14890;old_locus_tag=DJ40_2936 NZ_CP008943.1 Protein Homology CDS 3264139 3264519 . - 0 ID=cds2878;Parent=gene2965;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3264745 3265134 . - . ID=gene2966;Name=DJ40_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14895;old_locus_tag=DJ40_2937 NZ_CP008943.1 Protein Homology CDS 3264745 3265134 . - 0 ID=cds2879;Parent=gene2966;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3265131 3265829 . - . ID=gene2967;Name=DJ40_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14900;old_locus_tag=DJ40_2938 NZ_CP008943.1 Protein Homology CDS 3265131 3265829 . - 0 ID=cds2880;Parent=gene2967;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3266107 3266640 . - . ID=gene2968;Name=DJ40_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14905;old_locus_tag=DJ40_2939 NZ_CP008943.1 Protein Homology CDS 3266107 3266640 . - 0 ID=cds2881;Parent=gene2968;Dbxref=Genbank:WP_012303498.1;Name=WP_012303498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303498.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3266889 3267683 . - . ID=gene2969;Name=DJ40_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14910;old_locus_tag=DJ40_2940 NZ_CP008943.1 Protein Homology CDS 3266889 3267683 . - 0 ID=cds2882;Parent=gene2969;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3267946 3269247 . - . ID=gene2970;Name=DJ40_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14915;old_locus_tag=DJ40_2941 NZ_CP008943.1 Protein Homology CDS 3267946 3269247 . - 0 ID=cds2883;Parent=gene2970;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3269297 3269464 . + . ID=gene2971;Name=DJ40_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14920 NZ_CP008943.1 Protein Homology CDS 3269297 3269464 . + 0 ID=cds2884;Parent=gene2971;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3269996 3271405 . + . ID=gene2972;Name=DJ40_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14925;old_locus_tag=DJ40_2942 NZ_CP008943.1 Protein Homology CDS 3269996 3271405 . + 0 ID=cds2885;Parent=gene2972;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3271604 3273055 . + . ID=gene2973;Name=DJ40_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14930;old_locus_tag=DJ40_2943 NZ_CP008943.1 Protein Homology CDS 3271604 3273055 . + 0 ID=cds2886;Parent=gene2973;Dbxref=Genbank:WP_011193132.1;Name=WP_011193132.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_011193132.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3273066 3274556 . + . ID=gene2974;Name=DJ40_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14935;old_locus_tag=DJ40_2944 NZ_CP008943.1 Protein Homology CDS 3273066 3274556 . + 0 ID=cds2887;Parent=gene2974;Dbxref=Genbank:WP_012104427.1;Name=WP_012104427.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_012104427.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3274709 3275239 . + . ID=gene2975;Name=DJ40_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14940;old_locus_tag=DJ40_2945 NZ_CP008943.1 Protein Homology CDS 3274709 3275239 . + 0 ID=cds2888;Parent=gene2975;Dbxref=Genbank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210407.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3275306 3276562 . - . ID=gene2976;Name=DJ40_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14945;old_locus_tag=DJ40_2946 NZ_CP008943.1 Protein Homology CDS 3275306 3276562 . - 0 ID=cds2889;Parent=gene2976;Dbxref=Genbank:WP_038401723.1;Name=WP_038401723.1;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_038401723.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3277097 3278092 . - . ID=gene2977;Name=DJ40_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14950;old_locus_tag=DJ40_2947 NZ_CP008943.1 Protein Homology CDS 3277097 3278092 . - 0 ID=cds2890;Parent=gene2977;Dbxref=Genbank:WP_002210405.1;Name=WP_002210405.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210405.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3278310 3278819 . - . ID=gene2978;Name=DJ40_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14955;old_locus_tag=DJ40_2948 NZ_CP008943.1 Protein Homology CDS 3278310 3278819 . - 0 ID=cds2891;Parent=gene2978;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3279092 3281923 . - . ID=gene2979;Name=DJ40_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14960;old_locus_tag=DJ40_2949 NZ_CP008943.1 Protein Homology CDS 3279092 3281923 . - 0 ID=cds2892;Parent=gene2979;Dbxref=Genbank:WP_038400801.1;Name=WP_038400801.1;gbkey=CDS;product=autotransporter;protein_id=WP_038400801.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3282569 3283756 . + . ID=gene2980;Name=DJ40_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14965;old_locus_tag=DJ40_2950 NZ_CP008943.1 Protein Homology CDS 3282569 3283756 . + 0 ID=cds2893;Parent=gene2980;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3283872 3285893 . - . ID=gene2981;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=DJ40_RS14970;old_locus_tag=DJ40_2951 NZ_CP008943.1 Protein Homology CDS 3283872 3285893 . - 0 ID=cds2894;Parent=gene2981;Dbxref=Genbank:WP_038400802.1;Name=WP_038400802.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_038400802.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3286106 3286675 . - . ID=gene2982;Name=DJ40_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14975;old_locus_tag=DJ40_2952 NZ_CP008943.1 Protein Homology CDS 3286106 3286675 . - 0 ID=cds2895;Parent=gene2982;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3286771 3287004 . + . ID=gene2983;Name=DJ40_RS14980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS14980;pseudo=true NZ_CP008943.1 Protein Homology CDS 3286771 3287004 . + 0 ID=cds2896;Parent=gene2983;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3286933..3286935%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 3287043 3288542 . - . ID=gene2984;Name=DJ40_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14985;old_locus_tag=DJ40_2953 NZ_CP008943.1 Protein Homology CDS 3287043 3288542 . - 0 ID=cds2897;Parent=gene2984;Dbxref=Genbank:WP_002230581.1;Name=WP_002230581.1;gbkey=CDS;product=kinase;protein_id=WP_002230581.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3288574 3290322 . - . ID=gene2985;Name=DJ40_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14990;old_locus_tag=DJ40_2954 NZ_CP008943.1 Protein Homology CDS 3288574 3290322 . - 0 ID=cds2898;Parent=gene2985;Dbxref=Genbank:WP_038400803.1;Name=WP_038400803.1;gbkey=CDS;product=phosphatase;protein_id=WP_038400803.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3290322 3291362 . - . ID=gene2986;Name=DJ40_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS14995;old_locus_tag=DJ40_2955 NZ_CP008943.1 Protein Homology CDS 3290322 3291362 . - 0 ID=cds2899;Parent=gene2986;Dbxref=Genbank:WP_002230582.1;Name=WP_002230582.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230582.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3291464 3292102 . - . ID=gene2987;Name=DJ40_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15000;old_locus_tag=DJ40_2956 NZ_CP008943.1 Protein Homology CDS 3291464 3292102 . - 0 ID=cds2900;Parent=gene2987;Dbxref=Genbank:WP_012104435.1;Name=WP_012104435.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_012104435.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3292104 3292745 . - . ID=gene2988;Name=DJ40_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15005;old_locus_tag=DJ40_2957 NZ_CP008943.1 Protein Homology CDS 3292104 3292745 . - 0 ID=cds2901;Parent=gene2988;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3292778 3293416 . - . ID=gene2989;Name=DJ40_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15010;old_locus_tag=DJ40_2958 NZ_CP008943.1 Protein Homology CDS 3292778 3293416 . - 0 ID=cds2902;Parent=gene2989;Dbxref=Genbank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002210395.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3294131 3295819 . + . ID=gene2990;Name=DJ40_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15015;old_locus_tag=DJ40_2959 NZ_CP008943.1 Protein Homology CDS 3294131 3295819 . + 0 ID=cds2903;Parent=gene2990;Dbxref=Genbank:WP_038400804.1;Name=WP_038400804.1;gbkey=CDS;product=hemolysin activator/exporter;protein_id=WP_038400804.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3295864 3305117 . + . ID=gene2991;Name=DJ40_RS15020;end_range=3305117,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15020;old_locus_tag=DJ40_2960;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3295864 3305117 . + 0 ID=cds2904;Parent=gene2991;end_range=3305117,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=adhesin;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3300970 3305110 . + . ID=id227;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3305900 3306289 . + . ID=gene2992;Name=DJ40_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15025;old_locus_tag=DJ40_2962 NZ_CP008943.1 Protein Homology CDS 3305900 3306289 . + 0 ID=cds2905;Parent=gene2992;Dbxref=Genbank:WP_011193124.1;Name=WP_011193124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193124.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3306502 3308091 . + . ID=id228;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3306951 3308108 . + . ID=gene2993;Name=DJ40_RS15030;end_range=3308108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15030;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3306951 3308108 . + 0 ID=cds2906;Parent=gene2993;end_range=3308108,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3308810 3309175 . + . ID=gene2994;Name=DJ40_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15035;old_locus_tag=DJ40_2964 NZ_CP008943.1 Protein Homology CDS 3308810 3309175 . + 0 ID=cds2907;Parent=gene2994;Dbxref=Genbank:WP_038400805.1;Name=WP_038400805.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400805.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3309211 3309555 . - . ID=gene2995;Name=DJ40_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15040;old_locus_tag=DJ40_2965 NZ_CP008943.1 Protein Homology CDS 3309211 3309555 . - 0 ID=cds2908;Parent=gene2995;Dbxref=Genbank:WP_038400806.1;Name=WP_038400806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400806.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3309646 3313561 . + . ID=id229;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3309647 3314220 . + . ID=gene2996;Name=DJ40_RS15045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15045;partial=true;pseudo=true;start_range=.,3309647 NZ_CP008943.1 Protein Homology CDS 3309647 3314220 . + 0 ID=cds2909;Parent=gene2996;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=adhesin;pseudo=true;start_range=.,3309647;transl_table=11 NZ_CP008943.1 RefSeq gene 3314217 3314450 . + . ID=gene2997;Name=DJ40_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15050;old_locus_tag=DJ40_2968 NZ_CP008943.1 Protein Homology CDS 3314217 3314450 . + 0 ID=cds2910;Parent=gene2997;Dbxref=Genbank:WP_002214946.1;Name=WP_002214946.1;gbkey=CDS;product=immunity protein CdiI;protein_id=WP_002214946.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3314512 3314661 . + . ID=gene2998;Name=DJ40_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15055 NZ_CP008943.1 Protein Homology CDS 3314512 3314661 . + 0 ID=cds2911;Parent=gene2998;Dbxref=Genbank:WP_002214947.1;Name=WP_002214947.1;gbkey=CDS;product=adhesin;protein_id=WP_002214947.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3314716 3314943 . + . ID=gene2999;Name=DJ40_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15060;old_locus_tag=DJ40_2969 NZ_CP008943.1 Protein Homology CDS 3314716 3314943 . + 0 ID=cds2912;Parent=gene2999;Dbxref=Genbank:WP_002214949.1;Name=WP_002214949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214949.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3315039 3315455 . + . ID=gene3000;Name=DJ40_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15065;old_locus_tag=DJ40_2970 NZ_CP008943.1 Protein Homology CDS 3315039 3315455 . + 0 ID=cds2913;Parent=gene3000;Dbxref=Genbank:WP_002214951.1;Name=WP_002214951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214951.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3315488 3316300 . + . ID=gene3001;Name=DJ40_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15070;old_locus_tag=DJ40_2971 NZ_CP008943.1 Protein Homology CDS 3315488 3316300 . + 0 ID=cds2914;Parent=gene3001;Dbxref=Genbank:WP_038400808.1;Name=WP_038400808.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_038400808.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3315497 3316440 . + . ID=id230;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3316327 3316491 . + . ID=gene3002;Name=DJ40_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15075 NZ_CP008943.1 Protein Homology CDS 3316327 3316491 . + 0 ID=cds2915;Parent=gene3002;Dbxref=Genbank:WP_002228290.1;Name=WP_002228290.1;gbkey=CDS;product=adhesin;protein_id=WP_002228290.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3316760 3319045 . - . ID=gene3003;Name=DJ40_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15080;old_locus_tag=DJ40_2972 NZ_CP008943.1 Protein Homology CDS 3316760 3319045 . - 0 ID=cds2916;Parent=gene3003;Dbxref=Genbank:WP_038400810.1;Name=WP_038400810.1;gbkey=CDS;product=autotransporter;protein_id=WP_038400810.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3319105 3320100 . - . ID=gene3004;Name=DJ40_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15085;old_locus_tag=DJ40_2973 NZ_CP008943.1 Protein Homology CDS 3319105 3320100 . - 0 ID=cds2917;Parent=gene3004;Dbxref=Genbank:WP_012414040.1;Name=WP_012414040.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012414040.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3320202 3321581 . - . ID=gene3005;Name=DJ40_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15090;old_locus_tag=DJ40_2974 NZ_CP008943.1 Protein Homology CDS 3320202 3321581 . - 0 ID=cds2918;Parent=gene3005;Dbxref=Genbank:WP_038400812.1;Name=WP_038400812.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400812.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3321907 3323022 . + . ID=gene3006;Name=DJ40_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15095;old_locus_tag=DJ40_2975 NZ_CP008943.1 Protein Homology CDS 3321907 3323022 . + 0 ID=cds2919;Parent=gene3006;Dbxref=Genbank:WP_038400813.1;Name=WP_038400813.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038400813.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3323105 3326458 . + . ID=gene3007;Name=DJ40_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15100;old_locus_tag=DJ40_2976 NZ_CP008943.1 Protein Homology CDS 3323105 3326458 . + 0 ID=cds2920;Parent=gene3007;Dbxref=Genbank:WP_038400815.1;Name=WP_038400815.1;gbkey=CDS;product=cellobiose phosphorylase;protein_id=WP_038400815.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3326567 3327553 . + . ID=gene3008;Name=DJ40_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15105;old_locus_tag=DJ40_2977 NZ_CP008943.1 Protein Homology CDS 3326567 3327553 . + 0 ID=cds2921;Parent=gene3008;Dbxref=Genbank:WP_011193115.1;Name=WP_011193115.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011193115.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3327630 3328874 . + . ID=gene3009;Name=DJ40_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15110;old_locus_tag=DJ40_2978 NZ_CP008943.1 Protein Homology CDS 3327630 3328874 . + 0 ID=cds2922;Parent=gene3009;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3328928 3329809 . + . ID=gene3010;Name=DJ40_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15115;old_locus_tag=DJ40_2979 NZ_CP008943.1 Protein Homology CDS 3328928 3329809 . + 0 ID=cds2923;Parent=gene3010;Dbxref=Genbank:WP_002210382.1;Name=WP_002210382.1;gbkey=CDS;product=permease;protein_id=WP_002210382.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3329809 3330627 . + . ID=gene3011;Name=DJ40_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15120;old_locus_tag=DJ40_2980 NZ_CP008943.1 Protein Homology CDS 3329809 3330627 . + 0 ID=cds2924;Parent=gene3011;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3330624 3331139 . + . ID=gene3012;Name=DJ40_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15125;old_locus_tag=DJ40_2981 NZ_CP008943.1 Protein Homology CDS 3330624 3331139 . + 0 ID=cds2925;Parent=gene3012;Dbxref=Genbank:WP_011193111.1;Name=WP_011193111.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193111.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3331190 3333373 . + . ID=gene3013;Name=DJ40_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15130;old_locus_tag=DJ40_2982 NZ_CP008943.1 Protein Homology CDS 3331190 3333373 . + 0 ID=cds2926;Parent=gene3013;Dbxref=Genbank:WP_012104454.1;Name=WP_012104454.1;gbkey=CDS;product=glycosidase;protein_id=WP_012104454.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3333437 3334963 . - . ID=gene3014;Name=DJ40_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15135;old_locus_tag=DJ40_2983 NZ_CP008943.1 Protein Homology CDS 3333437 3334963 . - 0 ID=cds2927;Parent=gene3014;Dbxref=Genbank:WP_038400817.1;Name=WP_038400817.1;gbkey=CDS;product=transporter;protein_id=WP_038400817.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3334968 3336869 . - . ID=gene3015;Name=DJ40_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15140;old_locus_tag=DJ40_2984 NZ_CP008943.1 Protein Homology CDS 3334968 3336869 . - 0 ID=cds2928;Parent=gene3015;Dbxref=Genbank:WP_012414037.1;Name=WP_012414037.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_012414037.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3336853 3337902 . - . ID=gene3016;Name=DJ40_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15145;old_locus_tag=DJ40_2985 NZ_CP008943.1 Protein Homology CDS 3336853 3337902 . - 0 ID=cds2929;Parent=gene3016;Dbxref=Genbank:WP_011193108.1;Name=WP_011193108.1;gbkey=CDS;product=hemolysin D;protein_id=WP_011193108.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3337912 3338247 . - . ID=gene3017;Name=DJ40_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15150 NZ_CP008943.1 Protein Homology CDS 3337912 3338247 . - 0 ID=cds2930;Parent=gene3017;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3338244 3338444 . - . ID=gene3018;Name=DJ40_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15155;old_locus_tag=DJ40_2987 NZ_CP008943.1 Protein Homology CDS 3338244 3338444 . - 0 ID=cds2931;Parent=gene3018;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3338617 3338724 . - . ID=gene3019;Name=DJ40_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15160 NZ_CP008943.1 Protein Homology CDS 3338617 3338724 . - 0 ID=cds2932;Parent=gene3019;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3339210 3340442 . + . ID=gene3020;Name=DJ40_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15165;old_locus_tag=DJ40_2988 NZ_CP008943.1 Protein Homology CDS 3339210 3340442 . + 0 ID=cds2933;Parent=gene3020;Dbxref=Genbank:WP_002210373.1;Name=WP_002210373.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002210373.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3340435 3341886 . + . ID=gene3021;Name=DJ40_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15170;old_locus_tag=DJ40_2989 NZ_CP008943.1 Protein Homology CDS 3340435 3341886 . + 0 ID=cds2934;Parent=gene3021;Dbxref=Genbank:WP_002214229.1;Name=WP_002214229.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002214229.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3341899 3342336 . + . ID=gene3022;Name=DJ40_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15175;old_locus_tag=DJ40_2990 NZ_CP008943.1 Protein Homology CDS 3341899 3342336 . + 0 ID=cds2935;Parent=gene3022;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3342470 3343102 . + . ID=gene3023;Name=DJ40_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15180;old_locus_tag=DJ40_2991 NZ_CP008943.1 Protein Homology CDS 3342470 3343102 . + 0 ID=cds2936;Parent=gene3023;Dbxref=Genbank:WP_011193106.1;Name=WP_011193106.1;gbkey=CDS;product=histidine kinase;protein_id=WP_011193106.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3343113 3343493 . + . ID=gene3024;Name=DJ40_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15185;old_locus_tag=DJ40_2992 NZ_CP008943.1 Protein Homology CDS 3343113 3343493 . + 0 ID=cds2937;Parent=gene3024;Dbxref=Genbank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210370.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3343778 3344182 . + . ID=gene3025;Name=DJ40_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15190;old_locus_tag=DJ40_2993 NZ_CP008943.1 Protein Homology CDS 3343778 3344182 . + 0 ID=cds2938;Parent=gene3025;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3344397 3344699 . - . ID=gene3026;Name=DJ40_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15195;old_locus_tag=DJ40_2994 NZ_CP008943.1 Protein Homology CDS 3344397 3344699 . - 0 ID=cds2939;Parent=gene3026;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3344959 3345675 . - . ID=gene3027;Name=DJ40_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15200;old_locus_tag=DJ40_2995 NZ_CP008943.1 Protein Homology CDS 3344959 3345675 . - 0 ID=cds2940;Parent=gene3027;Dbxref=Genbank:WP_011193105.1;Name=WP_011193105.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_011193105.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3345837 3346769 . + . ID=gene3028;Name=DJ40_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15205;old_locus_tag=DJ40_2996 NZ_CP008943.1 Protein Homology CDS 3345837 3346769 . + 0 ID=cds2941;Parent=gene3028;Dbxref=Genbank:WP_038400819.1;Name=WP_038400819.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_038400819.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3347220 3347423 . + . ID=gene3029;Name=DJ40_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15210 NZ_CP008943.1 Protein Homology CDS 3347220 3347423 . + 0 ID=cds2942;Parent=gene3029;Dbxref=Genbank:WP_038400820.1;Name=WP_038400820.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400820.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3347564 3347776 . + . ID=gene3030;Name=DJ40_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15215 NZ_CP008943.1 Protein Homology CDS 3347564 3347776 . + 0 ID=cds2943;Parent=gene3030;Dbxref=Genbank:WP_002218980.1;Name=WP_002218980.1;gbkey=CDS;product=cell filamentation protein Fic;protein_id=WP_002218980.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3347773 3347904 . - . ID=gene3031;Name=DJ40_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15220 NZ_CP008943.1 Protein Homology CDS 3347773 3347904 . - 0 ID=cds2944;Parent=gene3031;Dbxref=Genbank:WP_032487993.1;Name=WP_032487993.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032487993.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3348130 3348329 . - . ID=gene3032;Name=DJ40_RS15225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15225;pseudo=true NZ_CP008943.1 Protein Homology CDS 3348130 3348329 . - 0 ID=cds2945;Parent=gene3032;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3348487 3348717 . + . ID=gene3033;Name=DJ40_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15230;old_locus_tag=DJ40_2999 NZ_CP008943.1 Protein Homology CDS 3348487 3348717 . + 0 ID=cds2946;Parent=gene3033;Dbxref=Genbank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3348731 3349289 . + . ID=id231;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3348850 3350232 . + . ID=gene3034;Name=DJ40_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15235;old_locus_tag=DJ40_3000 NZ_CP008943.1 Protein Homology CDS 3348850 3350232 . + 0 ID=cds2947;Parent=gene3034;Dbxref=Genbank:WP_038400822.1;Name=WP_038400822.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_038400822.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3349333 3349883 . + . ID=id232;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3350241 3350711 . + . ID=gene3035;Name=DJ40_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15240;old_locus_tag=DJ40_3001 NZ_CP008943.1 Protein Homology CDS 3350241 3350711 . + 0 ID=cds2948;Parent=gene3035;Dbxref=Genbank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210361.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3350738 3351193 . + . ID=gene3036;Name=DJ40_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15245;old_locus_tag=DJ40_3002 NZ_CP008943.1 Protein Homology CDS 3350738 3351193 . + 0 ID=cds2949;Parent=gene3036;Dbxref=Genbank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210360.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3351198 3351826 . + . ID=id233;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3351210 3351500 . + . ID=gene3037;Name=DJ40_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15250;old_locus_tag=DJ40_3003 NZ_CP008943.1 Protein Homology CDS 3351210 3351500 . + 0 ID=cds2950;Parent=gene3037;Dbxref=Genbank:WP_002217366.1;Name=WP_002217366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217366.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3351478 3351816 . + . ID=gene3038;Name=DJ40_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15255;old_locus_tag=DJ40_3004 NZ_CP008943.1 Protein Homology CDS 3351478 3351816 . + 0 ID=cds2951;Parent=gene3038;Dbxref=Genbank:WP_002217368.1;Name=WP_002217368.1;gbkey=CDS;product=terminase;protein_id=WP_002217368.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3352062 3352138 . - . ID=gene3039;Name=DJ40_RS15260;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS15260;old_locus_tag=DJ40_3005 NZ_CP008943.1 tRNAscan-SE tRNA 3352062 3352138 . - . ID=rna78;Parent=gene3039;anticodon=(pos:complement(3352102..3352104));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 tRNAscan-SE exon 3352062 3352138 . - . ID=id234;Parent=rna78;anticodon=(pos:complement(3352102..3352104));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 RefSeq gene 3352334 3354172 . - . ID=gene3040;Name=DJ40_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15265;old_locus_tag=DJ40_3006 NZ_CP008943.1 Protein Homology CDS 3352334 3354172 . - 0 ID=cds2952;Parent=gene3040;Dbxref=Genbank:WP_002210359.1;Name=WP_002210359.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3354330 3356078 . - . ID=gene3041;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=DJ40_RS15270;old_locus_tag=DJ40_3007 NZ_CP008943.1 Protein Homology CDS 3354330 3356078 . - 0 ID=cds2953;Parent=gene3041;Dbxref=Genbank:WP_002210358.1;Name=WP_002210358.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3356214 3356429 . - . ID=gene3042;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=DJ40_RS15275;old_locus_tag=DJ40_3008 NZ_CP008943.1 Protein Homology CDS 3356214 3356429 . - 0 ID=cds2954;Parent=gene3042;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3356835 3357848 . + . ID=gene3043;Name=DJ40_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15280;old_locus_tag=DJ40_3009 NZ_CP008943.1 Protein Homology CDS 3356835 3357848 . + 0 ID=cds2955;Parent=gene3043;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3358094 3358744 . - . ID=gene3044;Name=DJ40_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15285;old_locus_tag=DJ40_3010 NZ_CP008943.1 Protein Homology CDS 3358094 3358744 . - 0 ID=cds2956;Parent=gene3044;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3358852 3359211 . + . ID=gene3045;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=DJ40_RS15290;old_locus_tag=DJ40_3011 NZ_CP008943.1 Protein Homology CDS 3358852 3359211 . + 0 ID=cds2957;Parent=gene3045;Dbxref=Genbank:WP_002212199.1;Name=WP_002212199.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002212199.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3359485 3360303 . + . ID=gene3046;Name=DJ40_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15295;old_locus_tag=DJ40_3012 NZ_CP008943.1 Protein Homology CDS 3359485 3360303 . + 0 ID=cds2958;Parent=gene3046;Dbxref=Genbank:WP_038400825.1;Name=WP_038400825.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=UDP pyrophosphate phosphatase;protein_id=WP_038400825.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3360539 3361777 . - . ID=gene3047;Name=DJ40_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15300;old_locus_tag=DJ40_3013 NZ_CP008943.1 Protein Homology CDS 3360539 3361777 . - 0 ID=cds2959;Parent=gene3047;Dbxref=Genbank:WP_011193101.1;Name=WP_011193101.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_011193101.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3361955 3362575 . - . ID=gene3048;Name=DJ40_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15305;old_locus_tag=DJ40_3014 NZ_CP008943.1 Protein Homology CDS 3361955 3362575 . - 0 ID=cds2960;Parent=gene3048;Dbxref=Genbank:WP_011193100.1;Name=WP_011193100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193100.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3362879 3364186 . + . ID=gene3049;Name=DJ40_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15310;old_locus_tag=DJ40_3015 NZ_CP008943.1 Protein Homology CDS 3362879 3364186 . + 0 ID=cds2961;Parent=gene3049;Dbxref=Genbank:WP_002212195.1;Name=WP_002212195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212195.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3364358 3367213 . + . ID=gene3050;Name=DJ40_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15315;old_locus_tag=DJ40_3016 NZ_CP008943.1 Protein Homology CDS 3364358 3367213 . + 0 ID=cds2962;Parent=gene3050;Dbxref=Genbank:WP_002212194.1;Name=WP_002212194.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_002212194.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3367348 3368778 . + . ID=gene3051;Name=DJ40_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15320;old_locus_tag=DJ40_3017 NZ_CP008943.1 Protein Homology CDS 3367348 3368778 . + 0 ID=cds2963;Parent=gene3051;Dbxref=Genbank:WP_038400827.1;Name=WP_038400827.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=heptose 1-phosphate adenyltransferase;protein_id=WP_038400827.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3368815 3370065 . + . ID=gene3052;Name=DJ40_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15325;old_locus_tag=DJ40_3018 NZ_CP008943.1 Protein Homology CDS 3368815 3370065 . + 0 ID=cds2964;Parent=gene3052;Dbxref=Genbank:WP_038400829.1;Name=WP_038400829.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_038400829.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3370101 3370276 . + . ID=id235;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3370390 3370671 . - . ID=gene3053;Name=DJ40_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15330;old_locus_tag=DJ40_3019 NZ_CP008943.1 Protein Homology CDS 3370390 3370671 . - 0 ID=cds2965;Parent=gene3053;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3370827 3371079 . + . ID=gene3054;Name=DJ40_RS15335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15335;pseudo=true NZ_CP008943.1 Protein Homology CDS 3370827 3371079 . + 0 ID=cds2966;Parent=gene3054;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3371241 3371894 . + . ID=gene3055;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=DJ40_RS15340;old_locus_tag=DJ40_3020 NZ_CP008943.1 Protein Homology CDS 3371241 3371894 . + 0 ID=cds2967;Parent=gene3055;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3372353 3373135 . + . ID=gene3056;Name=DJ40_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15345;old_locus_tag=DJ40_3021 NZ_CP008943.1 Protein Homology CDS 3372353 3373135 . + 0 ID=cds2968;Parent=gene3056;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3373147 3373506 . + . ID=id236;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3373542 3374702 . - . ID=gene3057;Name=DJ40_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15350;old_locus_tag=DJ40_3022 NZ_CP008943.1 Protein Homology CDS 3373542 3374702 . - 0 ID=cds2969;Parent=gene3057;Dbxref=Genbank:WP_012104467.1;Name=WP_012104467.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104467.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3374712 3375395 . - . ID=gene3058;Name=DJ40_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15355;old_locus_tag=DJ40_3023 NZ_CP008943.1 Protein Homology CDS 3374712 3375395 . - 0 ID=cds2970;Parent=gene3058;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3375464 3375634 . + . ID=gene3059;Name=DJ40_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15360;old_locus_tag=DJ40_3024 NZ_CP008943.1 Protein Homology CDS 3375464 3375634 . + 0 ID=cds2971;Parent=gene3059;Dbxref=Genbank:WP_012303541.1;Name=WP_012303541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303541.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3375699 3377093 . - . ID=gene3060;Name=DJ40_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15365;old_locus_tag=DJ40_3025 NZ_CP008943.1 Protein Homology CDS 3375699 3377093 . - 0 ID=cds2972;Parent=gene3060;Dbxref=Genbank:WP_011193098.1;Name=WP_011193098.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_011193098.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3377489 3378121 . + . ID=gene3061;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=DJ40_RS15370;old_locus_tag=DJ40_3026 NZ_CP008943.1 Protein Homology CDS 3377489 3378121 . + 0 ID=cds2973;Parent=gene3061;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3378155 3378580 . + . ID=gene3062;Name=DJ40_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15375;old_locus_tag=DJ40_3027 NZ_CP008943.1 Protein Homology CDS 3378155 3378580 . + 0 ID=cds2974;Parent=gene3062;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3378589 3379431 . + . ID=gene3063;Name=DJ40_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15380;old_locus_tag=DJ40_3028 NZ_CP008943.1 Protein Homology CDS 3378589 3379431 . + 0 ID=cds2975;Parent=gene3063;Dbxref=Genbank:WP_038400831.1;Name=WP_038400831.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_038400831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3379489 3380070 . + . ID=gene3064;Name=DJ40_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15385;old_locus_tag=DJ40_3029 NZ_CP008943.1 Protein Homology CDS 3379489 3380070 . + 0 ID=cds2976;Parent=gene3064;Dbxref=Genbank:WP_011193096.1;Name=WP_011193096.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_011193096.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3380172 3382067 . + . ID=gene3065;Name=DJ40_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15390;old_locus_tag=DJ40_3030 NZ_CP008943.1 Protein Homology CDS 3380172 3382067 . + 0 ID=cds2977;Parent=gene3065;Dbxref=Genbank:WP_002212181.1;Name=WP_002212181.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3382071 3382982 . + . ID=gene3066;Name=DJ40_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15395;old_locus_tag=DJ40_3031 NZ_CP008943.1 Protein Homology CDS 3382071 3382982 . + 0 ID=cds2978;Parent=gene3066;Dbxref=Genbank:WP_038400832.1;Name=WP_038400832.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_038400832.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3383040 3383624 . - . ID=gene3067;Name=DJ40_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15400;old_locus_tag=DJ40_3032 NZ_CP008943.1 Protein Homology CDS 3383040 3383624 . - 0 ID=cds2979;Parent=gene3067;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3383928 3386201 . + . ID=gene3068;Name=DJ40_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15405;old_locus_tag=DJ40_3033 NZ_CP008943.1 Protein Homology CDS 3383928 3386201 . + 0 ID=cds2980;Parent=gene3068;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3386454 3387185 . + . ID=gene3069;Name=DJ40_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15410;old_locus_tag=DJ40_3034 NZ_CP008943.1 Protein Homology CDS 3386454 3387185 . + 0 ID=cds2981;Parent=gene3069;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3387364 3388788 . + . ID=gene3070;Name=DJ40_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15415;old_locus_tag=DJ40_3035 NZ_CP008943.1 Protein Homology CDS 3387364 3388788 . + 0 ID=cds2982;Parent=gene3070;Dbxref=Genbank:WP_038400833.1;Name=WP_038400833.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_038400833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3389066 3389614 . - . ID=gene3071;Name=DJ40_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15420;old_locus_tag=DJ40_3036 NZ_CP008943.1 Protein Homology CDS 3389066 3389614 . - 0 ID=cds2983;Parent=gene3071;Dbxref=Genbank:WP_032466724.1;Name=WP_032466724.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466724.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3389611 3390066 . - . ID=gene3072;Name=DJ40_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15425;old_locus_tag=DJ40_3037 NZ_CP008943.1 Protein Homology CDS 3389611 3390066 . - 0 ID=cds2984;Parent=gene3072;Dbxref=Genbank:WP_038400835.1;Name=WP_038400835.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400835.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3390511 3392838 . + . ID=gene3073;Name=DJ40_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15430;old_locus_tag=DJ40_3038 NZ_CP008943.1 Protein Homology CDS 3390511 3392838 . + 0 ID=cds2985;Parent=gene3073;Dbxref=Genbank:WP_038400837.1;Name=WP_038400837.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_038400837.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3392860 3393693 . - . ID=gene3074;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=DJ40_RS15435;old_locus_tag=DJ40_3039 NZ_CP008943.1 Protein Homology CDS 3392860 3393693 . - 0 ID=cds2986;Parent=gene3074;Dbxref=Genbank:WP_011193092.1;Name=WP_011193092.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_011193092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3393840 3394049 . + . ID=gene3075;Name=DJ40_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15440 NZ_CP008943.1 Protein Homology CDS 3393840 3394049 . + 0 ID=cds2987;Parent=gene3075;Dbxref=Genbank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3394112 3395269 . - . ID=gene3076;Name=DJ40_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15445;old_locus_tag=DJ40_3040 NZ_CP008943.1 Protein Homology CDS 3394112 3395269 . - 0 ID=cds2988;Parent=gene3076;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3395667 3396560 . + . ID=gene3077;Name=DJ40_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15450;old_locus_tag=DJ40_3041 NZ_CP008943.1 Protein Homology CDS 3395667 3396560 . + 0 ID=cds2989;Parent=gene3077;Dbxref=Genbank:WP_002213786.1;Name=WP_002213786.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3396652 3397314 . - . ID=gene3078;Name=DJ40_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15455;old_locus_tag=DJ40_3042 NZ_CP008943.1 Protein Homology CDS 3396652 3397314 . - 0 ID=cds2990;Parent=gene3078;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3397507 3398718 . - . ID=gene3079;Name=DJ40_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15460;old_locus_tag=DJ40_3043 NZ_CP008943.1 Protein Homology CDS 3397507 3398718 . - 0 ID=cds2991;Parent=gene3079;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3399515 3400228 . + . ID=gene3080;Name=DJ40_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15465 NZ_CP008943.1 Protein Homology CDS 3399515 3400228 . + 0 ID=cds2992;Parent=gene3080;Dbxref=Genbank:WP_012104474.1;Name=WP_012104474.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_012104474.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3400232 3400663 . + . ID=gene3081;Name=DJ40_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15470;old_locus_tag=DJ40_3045 NZ_CP008943.1 Protein Homology CDS 3400232 3400663 . + 0 ID=cds2993;Parent=gene3081;Dbxref=Genbank:WP_012414002.1;Name=WP_012414002.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_012414002.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3400742 3402298 . - . ID=gene3082;Name=DJ40_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15475;old_locus_tag=DJ40_3046 NZ_CP008943.1 Protein Homology CDS 3400742 3402298 . - 0 ID=cds2994;Parent=gene3082;Dbxref=Genbank:WP_012104475.1;Name=WP_012104475.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104475.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3402323 3402895 . - . ID=gene3083;Name=DJ40_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15480;old_locus_tag=DJ40_3047 NZ_CP008943.1 Protein Homology CDS 3402323 3402895 . - 0 ID=cds2995;Parent=gene3083;Dbxref=Genbank:WP_002212168.1;Name=WP_002212168.1;gbkey=CDS;product=pseudopilin;protein_id=WP_002212168.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3402879 3403352 . - . ID=gene3084;Name=DJ40_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15485;old_locus_tag=DJ40_3048 NZ_CP008943.1 Protein Homology CDS 3402879 3403352 . - 0 ID=cds2996;Parent=gene3084;Dbxref=Genbank:WP_002357277.1;Name=WP_002357277.1;gbkey=CDS;product=pilus biosynthesis protein TadE;protein_id=WP_002357277.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3403349 3404119 . - . ID=gene3085;Name=DJ40_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15490;old_locus_tag=DJ40_3049 NZ_CP008943.1 Protein Homology CDS 3403349 3404119 . - 0 ID=cds2997;Parent=gene3085;Dbxref=Genbank:WP_002212166.1;Name=WP_002212166.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212166.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3404103 3404936 . - . ID=gene3086;Name=DJ40_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15495;old_locus_tag=DJ40_3050 NZ_CP008943.1 Protein Homology CDS 3404103 3404936 . - 0 ID=cds2998;Parent=gene3086;Dbxref=Genbank:WP_011193086.1;Name=WP_011193086.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_011193086.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3404933 3405808 . - . ID=gene3087;Name=DJ40_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15500;old_locus_tag=DJ40_3051 NZ_CP008943.1 Protein Homology CDS 3404933 3405808 . - 0 ID=cds2999;Parent=gene3087;Dbxref=Genbank:WP_038400838.1;Name=WP_038400838.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_038400838.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3405805 3407091 . - . ID=gene3088;Name=DJ40_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15505;old_locus_tag=DJ40_3052 NZ_CP008943.1 Protein Homology CDS 3405805 3407091 . - 0 ID=cds3000;Parent=gene3088;Dbxref=Genbank:WP_002213785.1;Name=WP_002213785.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002213785.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3407103 3408230 . - . ID=gene3089;Name=DJ40_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15510;old_locus_tag=DJ40_3053 NZ_CP008943.1 Protein Homology CDS 3407103 3408230 . - 0 ID=cds3001;Parent=gene3089;Dbxref=Genbank:WP_038400839.1;Name=WP_038400839.1;gbkey=CDS;product=pilus assembly protein CpaE;protein_id=WP_038400839.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3408241 3408531 . - . ID=gene3090;Name=DJ40_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15515;old_locus_tag=DJ40_3054 NZ_CP008943.1 Protein Homology CDS 3408241 3408531 . - 0 ID=cds3002;Parent=gene3090;Dbxref=Genbank:WP_038400842.1;Name=WP_038400842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400842.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3408528 3409847 . - . ID=gene3091;Name=DJ40_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15520;old_locus_tag=DJ40_3055 NZ_CP008943.1 Protein Homology CDS 3408528 3409847 . - 0 ID=cds3003;Parent=gene3091;Dbxref=Genbank:WP_011193083.1;Name=WP_011193083.1;gbkey=CDS;product=secretin;protein_id=WP_011193083.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3409844 3410710 . - . ID=gene3092;Name=DJ40_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15525;old_locus_tag=DJ40_3056 NZ_CP008943.1 Protein Homology CDS 3409844 3410710 . - 0 ID=cds3004;Parent=gene3092;Dbxref=Genbank:WP_038400844.1;Name=WP_038400844.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_038400844.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3410762 3411184 . - . ID=gene3093;Name=DJ40_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15530;old_locus_tag=DJ40_3057 NZ_CP008943.1 Protein Homology CDS 3410762 3411184 . - 0 ID=cds3005;Parent=gene3093;Dbxref=Genbank:WP_038400846.1;Name=WP_038400846.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_038400846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3411253 3411447 . - . ID=gene3094;Name=DJ40_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15535;old_locus_tag=DJ40_3058 NZ_CP008943.1 Protein Homology CDS 3411253 3411447 . - 0 ID=cds3006;Parent=gene3094;Dbxref=Genbank:WP_038400848.1;Name=WP_038400848.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_038400848.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3411677 3412264 . - . ID=gene3095;Name=DJ40_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15540;old_locus_tag=DJ40_3059 NZ_CP008943.1 Protein Homology CDS 3411677 3412264 . - 0 ID=cds3007;Parent=gene3095;Dbxref=Genbank:WP_038400849.1;Name=WP_038400849.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400849.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3413188 3413382 . - . ID=gene3096;Name=DJ40_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15545 NZ_CP008943.1 Protein Homology CDS 3413188 3413382 . - 0 ID=cds3008;Parent=gene3096;Dbxref=Genbank:WP_038400850.1;Name=WP_038400850.1;gbkey=CDS;product=transposase;protein_id=WP_038400850.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3413250 3413580 . + . ID=id237;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3413989 3417922 . + . ID=id238;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3414002 3418753 . + . ID=gene3097;Name=DJ40_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15550 NZ_CP008943.1 Protein Homology CDS 3414002 3418753 . + 0 ID=cds3009;Parent=gene3097;Dbxref=Genbank:WP_049862787.1;Name=WP_049862787.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862787.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3418859 3419189 . + . ID=id239;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3419363 3420775 . - . ID=gene3098;Name=DJ40_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15555;old_locus_tag=DJ40_3063 NZ_CP008943.1 Protein Homology CDS 3419363 3420775 . - 0 ID=cds3010;Parent=gene3098;Dbxref=Genbank:WP_038400851.1;Name=WP_038400851.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400851.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3420847 3422262 . - . ID=gene3099;Name=DJ40_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15560;old_locus_tag=DJ40_3065 NZ_CP008943.1 Protein Homology CDS 3420847 3422262 . - 0 ID=cds3011;Parent=gene3099;Dbxref=Genbank:WP_038400852.1;Name=WP_038400852.1;gbkey=CDS;product=chitinase;protein_id=WP_038400852.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3422746 3423914 . + . ID=id240;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3423383 3423913 . + . ID=gene3100;Name=DJ40_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15565;old_locus_tag=DJ40_3066 NZ_CP008943.1 Protein Homology CDS 3423383 3423913 . + 0 ID=cds3012;Parent=gene3100;Dbxref=Genbank:WP_011192686.1;Name=WP_011192686.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_011192686.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3424220 3426700 . + . ID=gene3101;Name=DJ40_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15570;old_locus_tag=DJ40_3067 NZ_CP008943.1 Protein Homology CDS 3424220 3426700 . + 0 ID=cds3013;Parent=gene3101;Dbxref=Genbank:WP_038400855.1;Name=WP_038400855.1;gbkey=CDS;product=fimbrial assembly protein;protein_id=WP_038400855.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3426718 3427437 . + . ID=gene3102;Name=DJ40_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15575;old_locus_tag=DJ40_3068 NZ_CP008943.1 Protein Homology CDS 3426718 3427437 . + 0 ID=cds3014;Parent=gene3102;Dbxref=Genbank:WP_002211457.1;Name=WP_002211457.1;gbkey=CDS;product=fimbrial chaperone protein;protein_id=WP_002211457.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3427462 3428565 . + . ID=gene3103;Name=DJ40_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15580;old_locus_tag=DJ40_3069 NZ_CP008943.1 Protein Homology CDS 3427462 3428565 . + 0 ID=cds3015;Parent=gene3103;Dbxref=Genbank:WP_011193074.1;Name=WP_011193074.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011193074.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3428615 3428745 . + . ID=id241;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3428777 3429856 . - . ID=gene3104;Name=DJ40_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15585;old_locus_tag=DJ40_3070 NZ_CP008943.1 Protein Homology CDS 3428777 3429856 . - 0 ID=cds3016;Parent=gene3104;Dbxref=Genbank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3430712 3431707 . + . ID=gene3105;Name=DJ40_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15590;old_locus_tag=DJ40_3071 NZ_CP008943.1 Protein Homology CDS 3430712 3431707 . + 0 ID=cds3017;Parent=gene3105;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3431799 3432368 . - . ID=gene3106;Name=DJ40_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15595;old_locus_tag=DJ40_3072 NZ_CP008943.1 Protein Homology CDS 3431799 3432368 . - 0 ID=cds3018;Parent=gene3106;Dbxref=Genbank:WP_011193073.1;Name=WP_011193073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193073.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3432580 3434676 . - . ID=gene3107;Name=DJ40_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15600;old_locus_tag=DJ40_3073 NZ_CP008943.1 Protein Homology CDS 3432580 3434676 . - 0 ID=cds3019;Parent=gene3107;Dbxref=Genbank:WP_011193072.1;Name=WP_011193072.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_011193072.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3434663 3435796 . - . ID=gene3108;Name=DJ40_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15605;old_locus_tag=DJ40_3074 NZ_CP008943.1 Protein Homology CDS 3434663 3435796 . - 0 ID=cds3020;Parent=gene3108;Dbxref=Genbank:WP_038400857.1;Name=WP_038400857.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_038400857.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3435796 3436569 . - . ID=gene3109;Name=DJ40_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15610;old_locus_tag=DJ40_3075 NZ_CP008943.1 Protein Homology CDS 3435796 3436569 . - 0 ID=cds3021;Parent=gene3109;Dbxref=Genbank:WP_002213766.1;Name=WP_002213766.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_002213766.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3436576 3436848 . - . ID=gene3110;Name=DJ40_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15615;old_locus_tag=DJ40_3076 NZ_CP008943.1 Protein Homology CDS 3436576 3436848 . - 0 ID=cds3022;Parent=gene3110;Dbxref=Genbank:WP_002211449.1;Name=WP_002211449.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3436850 3437620 . - . ID=gene3111;Name=DJ40_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15620;old_locus_tag=DJ40_3077 NZ_CP008943.1 Protein Homology CDS 3436850 3437620 . - 0 ID=cds3023;Parent=gene3111;Dbxref=Genbank:WP_002211448.1;Name=WP_002211448.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_002211448.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3437617 3438030 . - . ID=gene3112;Name=DJ40_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15625;old_locus_tag=DJ40_3078 NZ_CP008943.1 Protein Homology CDS 3437617 3438030 . - 0 ID=cds3024;Parent=gene3112;Dbxref=Genbank:WP_002211447.1;Name=WP_002211447.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3438023 3438922 . - . ID=gene3113;Name=DJ40_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15630;old_locus_tag=DJ40_3079 NZ_CP008943.1 Protein Homology CDS 3438023 3438922 . - 0 ID=cds3025;Parent=gene3113;Dbxref=Genbank:WP_038400860.1;Name=WP_038400860.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_038400860.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3439437 3440465 . + . ID=gene3114;Name=DJ40_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15635;old_locus_tag=DJ40_3080 NZ_CP008943.1 Protein Homology CDS 3439437 3440465 . + 0 ID=cds3026;Parent=gene3114;Dbxref=Genbank:WP_002211445.1;Name=WP_002211445.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002211445.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3440482 3440862 . + . ID=gene3115;Name=DJ40_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15640;old_locus_tag=DJ40_3081 NZ_CP008943.1 Protein Homology CDS 3440482 3440862 . + 0 ID=cds3027;Parent=gene3115;Dbxref=Genbank:WP_002211444.1;Name=WP_002211444.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_002211444.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3440872 3442512 . + . ID=gene3116;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=DJ40_RS15645;old_locus_tag=DJ40_3082 NZ_CP008943.1 Protein Homology CDS 3440872 3442512 . + 0 ID=cds3028;Parent=gene3116;Dbxref=Genbank:WP_038400861.1;Name=WP_038400861.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar MS-ring protein;protein_id=WP_038400861.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3442484 3443527 . + . ID=gene3117;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=DJ40_RS15650;old_locus_tag=DJ40_3083 NZ_CP008943.1 Protein Homology CDS 3442484 3443527 . + 0 ID=cds3029;Parent=gene3117;Dbxref=Genbank:WP_002211442.1;Name=WP_002211442.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3443532 3444248 . + . ID=gene3118;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=DJ40_RS15655;old_locus_tag=DJ40_3084 NZ_CP008943.1 Protein Homology CDS 3443532 3444248 . + 0 ID=cds3030;Parent=gene3118;Dbxref=Genbank:WP_011193066.1;Name=WP_011193066.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_011193066.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3444241 3445581 . + . ID=gene3119;Name=DJ40_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15660;old_locus_tag=DJ40_3085 NZ_CP008943.1 Protein Homology CDS 3444241 3445581 . + 0 ID=cds3031;Parent=gene3119;Dbxref=Genbank:WP_012303576.1;Name=WP_012303576.1;gbkey=CDS;product=ATP synthase;protein_id=WP_012303576.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3445585 3446022 . + . ID=gene3120;Name=DJ40_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15665;old_locus_tag=DJ40_3086 NZ_CP008943.1 Protein Homology CDS 3445585 3446022 . + 0 ID=cds3032;Parent=gene3120;Dbxref=Genbank:WP_032466716.1;Name=WP_032466716.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_032466716.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3446352 3446777 . - . ID=gene3121;Name=DJ40_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15670;old_locus_tag=DJ40_3087 NZ_CP008943.1 Protein Homology CDS 3446352 3446777 . - 0 ID=cds3033;Parent=gene3121;Dbxref=Genbank:WP_032466715.1;Name=WP_032466715.1;gbkey=CDS;product=flagellar biosynthesis protein FlgN;protein_id=WP_032466715.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3446784 3447050 . - . ID=gene3122;Name=DJ40_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15675;old_locus_tag=DJ40_3088 NZ_CP008943.1 Protein Homology CDS 3446784 3447050 . - 0 ID=cds3034;Parent=gene3122;Dbxref=Genbank:WP_032466714.1;Name=WP_032466714.1;gbkey=CDS;product=flagellar regulatory protein;protein_id=WP_032466714.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3447317 3448165 . - . ID=gene3123;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=DJ40_RS15680;old_locus_tag=DJ40_3089 NZ_CP008943.1 Protein Homology CDS 3447317 3448165 . - 0 ID=cds3035;Parent=gene3123;Dbxref=Genbank:WP_032466713.1;Name=WP_032466713.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_032466713.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3448223 3448669 . + . ID=gene3124;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=DJ40_RS15685;old_locus_tag=DJ40_3090 NZ_CP008943.1 Protein Homology CDS 3448223 3448669 . + 0 ID=cds3036;Parent=gene3124;Dbxref=Genbank:WP_032466712.1;Name=WP_032466712.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_032466712.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3448672 3449097 . + . ID=gene3125;Name=DJ40_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15690;old_locus_tag=DJ40_3091 NZ_CP008943.1 Protein Homology CDS 3448672 3449097 . + 0 ID=cds3037;Parent=gene3125;Dbxref=Genbank:WP_002211434.1;Name=WP_002211434.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3449100 3449756 . + . ID=gene3126;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=DJ40_RS15695;old_locus_tag=DJ40_3092 NZ_CP008943.1 Protein Homology CDS 3449100 3449756 . + 0 ID=cds3038;Parent=gene3126;Dbxref=Genbank:WP_032466711.1;Name=WP_032466711.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_032466711.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3449811 3451016 . + . ID=gene3127;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=DJ40_RS15700;old_locus_tag=DJ40_3093 NZ_CP008943.1 Protein Homology CDS 3449811 3451016 . + 0 ID=cds3039;Parent=gene3127;Dbxref=Genbank:WP_032466710.1;Name=WP_032466710.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_032466710.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3451016 3451747 . + . ID=gene3128;Name=DJ40_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15705;old_locus_tag=DJ40_3094 NZ_CP008943.1 Protein Homology CDS 3451016 3451747 . + 0 ID=cds3040;Parent=gene3128;Dbxref=Genbank:WP_032466709.1;Name=WP_032466709.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_032466709.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3451815 3452600 . + . ID=gene3129;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=DJ40_RS15710;old_locus_tag=DJ40_3095 NZ_CP008943.1 Protein Homology CDS 3451815 3452600 . + 0 ID=cds3041;Parent=gene3129;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3452635 3453300 . + . ID=gene3130;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=DJ40_RS15715;old_locus_tag=DJ40_3096 NZ_CP008943.1 Protein Homology CDS 3452635 3453300 . + 0 ID=cds3042;Parent=gene3130;Dbxref=Genbank:WP_002211429.1;Name=WP_002211429.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein FlgH;protein_id=WP_002211429.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3453431 3454489 . + . ID=gene3131;Name=DJ40_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15720;old_locus_tag=DJ40_3097 NZ_CP008943.1 Protein Homology CDS 3453431 3454489 . + 0 ID=cds3043;Parent=gene3131;Dbxref=Genbank:WP_042592914.1;Name=WP_042592914.1;gbkey=CDS;product=flagellar P-ring protein FlgI;protein_id=WP_042592914.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3454499 3454792 . + . ID=gene3132;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=DJ40_RS15725;old_locus_tag=DJ40_3098 NZ_CP008943.1 Protein Homology CDS 3454499 3454792 . + 0 ID=cds3044;Parent=gene3132;Dbxref=Genbank:WP_002211427.1;Name=WP_002211427.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_002211427.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3454905 3456266 . + . ID=gene3133;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=DJ40_RS15730;old_locus_tag=DJ40_3099 NZ_CP008943.1 Protein Homology CDS 3454905 3456266 . + 0 ID=cds3045;Parent=gene3133;Dbxref=Genbank:WP_038400864.1;Name=WP_038400864.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_038400864.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3456295 3457218 . + . ID=gene3134;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=DJ40_RS15735;old_locus_tag=DJ40_3100 NZ_CP008943.1 Protein Homology CDS 3456295 3457218 . + 0 ID=cds3046;Parent=gene3134;Dbxref=Genbank:WP_032466708.1;Name=WP_032466708.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;gbkey=CDS;gene=flgL;product=flagellar hook protein FlgL;protein_id=WP_032466708.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3457230 3458244 . + . ID=gene3135;Name=DJ40_RS15740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15740;pseudo=true NZ_CP008943.1 Protein Homology CDS 3457230 3458244 . + 0 ID=cds3047;Parent=gene3135;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar hook-associated protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3458408 3458689 . - . ID=gene3136;Name=DJ40_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15745 NZ_CP008943.1 Protein Homology CDS 3458408 3458689 . - 0 ID=cds3048;Parent=gene3136;Dbxref=Genbank:WP_049862814.1;Name=WP_049862814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862814.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3458901 3460097 . + . ID=gene3137;Name=DJ40_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15750;old_locus_tag=DJ40_3104 NZ_CP008943.1 Protein Homology CDS 3458901 3460097 . + 0 ID=cds3049;Parent=gene3137;Dbxref=Genbank:WP_032466705.1;Name=WP_032466705.1;gbkey=CDS;product=flagellin;protein_id=WP_032466705.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3460203 3460652 . + . ID=id242;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3460302 3460655 . + . ID=gene3138;Name=DJ40_RS15755;end_range=3460655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15755;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3460302 3460655 . + 0 ID=cds3050;Parent=gene3138;end_range=3460655,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3460643 3460999 . + . ID=gene3139;Name=DJ40_RS15760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15760;old_locus_tag=DJ40_3105;partial=true;pseudo=true;start_range=.,3460643 NZ_CP008943.1 Protein Homology CDS 3460643 3460999 . + 0 ID=cds3051;Parent=gene3139;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=flagellar hook-length control protein;pseudo=true;start_range=.,3460643;transl_table=11 NZ_CP008943.1 RefSeq gene 3461038 3461508 . + . ID=gene3140;Name=DJ40_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15765;old_locus_tag=DJ40_3106 NZ_CP008943.1 Protein Homology CDS 3461038 3461508 . + 0 ID=cds3052;Parent=gene3140;Dbxref=Genbank:WP_002211414.1;Name=WP_002211414.1;gbkey=CDS;product=flagellar protein;protein_id=WP_002211414.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3461514 3462209 . + . ID=gene3141;Name=DJ40_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15770;old_locus_tag=DJ40_3107 NZ_CP008943.1 Protein Homology CDS 3461514 3462209 . + 0 ID=cds3053;Parent=gene3141;Dbxref=Genbank:WP_002211413.1;Name=WP_002211413.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;product=DNA-directed RNA polymerase sigma-70 factor;protein_id=WP_002211413.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3462225 3463091 . + . ID=gene3142;Name=DJ40_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15775;old_locus_tag=DJ40_3108 NZ_CP008943.1 Protein Homology CDS 3462225 3463091 . + 0 ID=cds3054;Parent=gene3142;Dbxref=Genbank:WP_038400867.1;Name=WP_038400867.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_038400867.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3463091 3464002 . + . ID=gene3143;Name=DJ40_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15780;old_locus_tag=DJ40_3109 NZ_CP008943.1 Protein Homology CDS 3463091 3464002 . + 0 ID=cds3055;Parent=gene3143;Dbxref=Genbank:WP_038400869.1;Name=WP_038400869.1;gbkey=CDS;product=flagellar motor protein B;protein_id=WP_038400869.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3464071 3464258 . + . ID=gene3144;Name=DJ40_RS15785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15785;pseudo=true NZ_CP008943.1 Protein Homology CDS 3464071 3464258 . + 0 ID=cds3056;Parent=gene3144;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3464461 3465057 . + . ID=gene3145;Name=DJ40_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15790;old_locus_tag=DJ40_3110 NZ_CP008943.1 Protein Homology CDS 3464461 3465057 . + 0 ID=cds3057;Parent=gene3145;Dbxref=Genbank:WP_002211410.1;Name=WP_002211410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211410.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3465054 3465509 . + . ID=gene3146;Name=DJ40_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15795;old_locus_tag=DJ40_3111 NZ_CP008943.1 Protein Homology CDS 3465054 3465509 . + 0 ID=cds3058;Parent=gene3146;Dbxref=Genbank:WP_002211409.1;Name=WP_002211409.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211409.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3465607 3465864 . + . ID=gene3147;Name=DJ40_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15800 NZ_CP008943.1 Protein Homology CDS 3465607 3465864 . + 0 ID=cds3059;Parent=gene3147;Dbxref=Genbank:WP_002353780.1;Name=WP_002353780.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353780.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3465990 3466457 . - . ID=gene3148;Name=DJ40_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15805;old_locus_tag=DJ40_3113 NZ_CP008943.1 Protein Homology CDS 3465990 3466457 . - 0 ID=cds3060;Parent=gene3148;Dbxref=Genbank:WP_002226659.1;Name=WP_002226659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002226659.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3466706 3467008 . - . ID=gene3149;Name=DJ40_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15810 NZ_CP008943.1 Protein Homology CDS 3466706 3467008 . - 0 ID=cds3061;Parent=gene3149;Dbxref=Genbank:WP_002230614.1;Name=WP_002230614.1;gbkey=CDS;product=membrane protein;protein_id=WP_002230614.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3467672 3470239 . - . ID=gene3150;Name=DJ40_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15815;old_locus_tag=DJ40_3114 NZ_CP008943.1 Protein Homology CDS 3467672 3470239 . - 0 ID=cds3062;Parent=gene3150;Dbxref=Genbank:WP_038400870.1;Name=WP_038400870.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_038400870.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3470678 3471988 . + . ID=gene3151;Name=DJ40_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15820;old_locus_tag=DJ40_3115 NZ_CP008943.1 Protein Homology CDS 3470678 3471988 . + 0 ID=cds3063;Parent=gene3151;Dbxref=Genbank:WP_038400873.1;Name=WP_038400873.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_038400873.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3472001 3475120 . + . ID=gene3152;Name=DJ40_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15825;old_locus_tag=DJ40_3116 NZ_CP008943.1 Protein Homology CDS 3472001 3475120 . + 0 ID=cds3064;Parent=gene3152;Dbxref=Genbank:WP_002211642.1;Name=WP_002211642.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_002211642.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3475239 3476729 . - . ID=gene3153;Name=DJ40_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15830;old_locus_tag=DJ40_3117 NZ_CP008943.1 Protein Homology CDS 3475239 3476729 . - 0 ID=cds3065;Parent=gene3153;Dbxref=Genbank:WP_038400874.1;Name=WP_038400874.1;gbkey=CDS;product=enterotoxin;protein_id=WP_038400874.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3477005 3477592 . + . ID=gene3154;Name=DJ40_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15835;old_locus_tag=DJ40_3118 NZ_CP008943.1 Protein Homology CDS 3477005 3477592 . + 0 ID=cds3066;Parent=gene3154;Dbxref=Genbank:WP_038400876.1;Name=WP_038400876.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400876.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3478430 3489559 . + . ID=gene3155;Name=DJ40_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15840;old_locus_tag=DJ40_3119 NZ_CP008943.1 Protein Homology CDS 3478430 3489559 . + 0 ID=cds3067;Parent=gene3155;Dbxref=Genbank:WP_038400878.1;Name=WP_038400878.1;gbkey=CDS;product=autotransporter;protein_id=WP_038400878.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3481539 3481989 . + . ID=id243;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3482357 3482812 . + . ID=id244;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3483384 3483852 . + . ID=id245;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3484178 3484768 . + . ID=id246;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3485181 3485673 . + . ID=id247;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3486017 3486607 . + . ID=id248;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3489738 3490557 . + . ID=id249;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3489791 3490495 . - . ID=gene3156;Name=DJ40_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15845;old_locus_tag=DJ40_3120 NZ_CP008943.1 Protein Homology CDS 3489791 3490495 . - 0 ID=cds3068;Parent=gene3156;Dbxref=Genbank:WP_038400879.1;Name=WP_038400879.1;gbkey=CDS;product=transposase;protein_id=WP_038400879.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3490907 3491326 . + . ID=gene3157;Name=DJ40_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15850;old_locus_tag=DJ40_3121 NZ_CP008943.1 Protein Homology CDS 3490907 3491326 . + 0 ID=cds3069;Parent=gene3157;Dbxref=Genbank:WP_038401742.1;Name=WP_038401742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401742.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3491334 3492593 . + . ID=gene3158;Name=DJ40_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15855;old_locus_tag=DJ40_3122 NZ_CP008943.1 Protein Homology CDS 3491334 3492593 . + 0 ID=cds3070;Parent=gene3158;Dbxref=Genbank:WP_038400880.1;Name=WP_038400880.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;product=DNA polymerase V subunit UmuC;protein_id=WP_038400880.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3492623 3492943 . - . ID=gene3159;Name=DJ40_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15860;old_locus_tag=DJ40_3123 NZ_CP008943.1 Protein Homology CDS 3492623 3492943 . - 0 ID=cds3071;Parent=gene3159;Dbxref=Genbank:WP_038400881.1;Name=WP_038400881.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400881.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3492940 3493380 . - . ID=gene3160;Name=DJ40_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15865;old_locus_tag=DJ40_3124 NZ_CP008943.1 Protein Homology CDS 3492940 3493380 . - 0 ID=cds3072;Parent=gene3160;Dbxref=Genbank:WP_038400883.1;Name=WP_038400883.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400883.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3493381 3494529 . - . ID=gene3161;Name=DJ40_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15870;old_locus_tag=DJ40_3125 NZ_CP008943.1 Protein Homology CDS 3493381 3494529 . - 0 ID=cds3073;Parent=gene3161;Dbxref=Genbank:WP_038400885.1;Name=WP_038400885.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400885.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3494531 3495403 . - . ID=gene3162;Name=DJ40_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15875;old_locus_tag=DJ40_3126 NZ_CP008943.1 Protein Homology CDS 3494531 3495403 . - 0 ID=cds3074;Parent=gene3162;Dbxref=Genbank:WP_038400887.1;Name=WP_038400887.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_038400887.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3495444 3495782 . - . ID=gene3163;Name=DJ40_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15880;old_locus_tag=DJ40_3127 NZ_CP008943.1 Protein Homology CDS 3495444 3495782 . - 0 ID=cds3075;Parent=gene3163;Dbxref=Genbank:WP_038277238.1;Name=WP_038277238.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038277238.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3495888 3496961 . - . ID=gene3164;Name=DJ40_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15885;old_locus_tag=DJ40_3128 NZ_CP008943.1 Protein Homology CDS 3495888 3496961 . - 0 ID=cds3076;Parent=gene3164;Dbxref=Genbank:WP_038400888.1;Name=WP_038400888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400888.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3497204 3497974 . - . ID=gene3165;Name=DJ40_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15890;old_locus_tag=DJ40_3129 NZ_CP008943.1 Protein Homology CDS 3497204 3497974 . - 0 ID=cds3077;Parent=gene3165;Dbxref=Genbank:WP_038400890.1;Name=WP_038400890.1;gbkey=CDS;product=resolvase;protein_id=WP_038400890.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3498004 3498824 . + . ID=id250;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3498057 3498761 . - . ID=gene3166;Name=DJ40_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15895;old_locus_tag=DJ40_3130 NZ_CP008943.1 Protein Homology CDS 3498057 3498761 . - 0 ID=cds3078;Parent=gene3166;Dbxref=Genbank:WP_038400879.1;Name=WP_038400879.1;gbkey=CDS;product=transposase;protein_id=WP_038400879.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3499301 3501644 . + . ID=id251;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3499314 3502514 . + . ID=gene3167;Name=DJ40_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21925;old_locus_tag=DJ40_3131 NZ_CP008943.1 Protein Homology CDS 3499314 3502514 . + 0 ID=cds3079;Parent=gene3167;Dbxref=Genbank:WP_049862788.1;Name=WP_049862788.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862788.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3502734 3503093 . + . ID=gene3168;Name=DJ40_RS15905;end_range=3503093,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15905;old_locus_tag=DJ40_3132;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3502734 3503093 . + 0 ID=cds3080;Parent=gene3168;end_range=3503093,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3503317 3504137 . + . ID=id252;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3503380 3504084 . + . ID=gene3169;Name=DJ40_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15910;old_locus_tag=DJ40_3133 NZ_CP008943.1 Protein Homology CDS 3503380 3504084 . + 0 ID=cds3081;Parent=gene3169;Dbxref=Genbank:WP_038400879.1;Name=WP_038400879.1;gbkey=CDS;product=transposase;protein_id=WP_038400879.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3504261 3504524 . + . ID=id253;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3504556 3506520 . + . ID=gene3170;Name=DJ40_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15915;old_locus_tag=DJ40_3134 NZ_CP008943.1 Protein Homology CDS 3504556 3506520 . + 0 ID=cds3082;Parent=gene3170;Dbxref=Genbank:WP_038400891.1;Name=WP_038400891.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400891.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3506666 3506926 . + . ID=gene3171;Name=DJ40_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15920;old_locus_tag=DJ40_3135 NZ_CP008943.1 Protein Homology CDS 3506666 3506926 . + 0 ID=cds3083;Parent=gene3171;Dbxref=Genbank:WP_038400893.1;Name=WP_038400893.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400893.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3506986 3507861 . + . ID=gene3172;Name=DJ40_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15925;old_locus_tag=DJ40_3136 NZ_CP008943.1 Protein Homology CDS 3506986 3507861 . + 0 ID=cds3084;Parent=gene3172;Dbxref=Genbank:WP_049862789.1;Name=WP_049862789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862789.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3507970 3508293 . + . ID=gene3173;Name=DJ40_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15930;old_locus_tag=DJ40_3137 NZ_CP008943.1 Protein Homology CDS 3507970 3508293 . + 0 ID=cds3085;Parent=gene3173;Dbxref=Genbank:WP_038400895.1;Name=WP_038400895.1;gbkey=CDS;product=RelE toxin protein;protein_id=WP_038400895.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3508280 3508561 . + . ID=gene3174;Name=DJ40_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15935;old_locus_tag=DJ40_3138 NZ_CP008943.1 Protein Homology CDS 3508280 3508561 . + 0 ID=cds3086;Parent=gene3174;Dbxref=Genbank:WP_038277219.1;Name=WP_038277219.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_038277219.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3509006 3509233 . + . ID=gene3175;Name=DJ40_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15940 NZ_CP008943.1 GeneMarkS+ CDS 3509006 3509233 . + 0 ID=cds3087;Parent=gene3175;Dbxref=Genbank:WP_038400897.1;Name=WP_038400897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400897.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3509125 3509388 . + . ID=id254;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3509424 3510104 . + . ID=gene3176;Name=DJ40_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15945;old_locus_tag=DJ40_3139 NZ_CP008943.1 Protein Homology CDS 3509424 3510104 . + 0 ID=cds3088;Parent=gene3176;Dbxref=Genbank:WP_049862790.1;Name=WP_049862790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862790.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3510080 3510896 . + . ID=id255;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3510132 3510833 . - . ID=gene3177;Name=DJ40_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15950;old_locus_tag=DJ40_3140 NZ_CP008943.1 Protein Homology CDS 3510132 3510833 . - 0 ID=cds3089;Parent=gene3177;Dbxref=Genbank:WP_038400899.1;Name=WP_038400899.1;gbkey=CDS;product=transposase;protein_id=WP_038400899.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3510895 3511587 . + . ID=gene3178;Name=DJ40_RS15955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15955;old_locus_tag=DJ40_3141;partial=true;pseudo=true;start_range=.,3510895 NZ_CP008943.1 Protein Homology CDS 3510895 3511587 . + 0 ID=cds3090;Parent=gene3178;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=aminobenzoyl-glutamate transporter;pseudo=true;start_range=.,3510895;transl_table=11 NZ_CP008943.1 RefSeq gene 3511997 3513229 . + . ID=gene3179;Name=DJ40_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15960;old_locus_tag=DJ40_3142 NZ_CP008943.1 Protein Homology CDS 3511997 3513229 . + 0 ID=cds3091;Parent=gene3179;Dbxref=Genbank:WP_011193029.1;Name=WP_011193029.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_011193029.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3513755 3515827 . + . ID=gene3180;Name=DJ40_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15965;old_locus_tag=DJ40_3143 NZ_CP008943.1 Protein Homology CDS 3513755 3515827 . + 0 ID=cds3092;Parent=gene3180;Dbxref=Genbank:WP_038400901.1;Name=WP_038400901.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_038400901.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3519455 3525951 . + . ID=gene3181;Name=DJ40_RS15975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS15975;pseudo=true NZ_CP008943.1 Protein Homology CDS 3519455 3525951 . + 0 ID=cds3093;Parent=gene3181;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide synthetase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3525959 3527647 . + . ID=gene3182;Name=DJ40_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15980 NZ_CP008943.1 Protein Homology CDS 3525959 3527647 . + 0 ID=cds3094;Parent=gene3182;Dbxref=Genbank:WP_038400903.1;Name=WP_038400903.1;gbkey=CDS;product=siderophore biosysnthesis protein;protein_id=WP_038400903.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3527660 3533389 . + . ID=gene3183;Name=DJ40_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15985;old_locus_tag=DJ40_3145 NZ_CP008943.1 Protein Homology CDS 3527660 3533389 . + 0 ID=cds3095;Parent=gene3183;Dbxref=Genbank:WP_038400905.1;Name=WP_038400905.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_038400905.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3533386 3534456 . + . ID=gene3184;Name=DJ40_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15990;old_locus_tag=DJ40_3146 NZ_CP008943.1 Protein Homology CDS 3533386 3534456 . + 0 ID=cds3096;Parent=gene3184;Dbxref=Genbank:WP_012104555.1;Name=WP_012104555.1;gbkey=CDS;product=saccharopine dehydrogenase;protein_id=WP_012104555.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3534453 3535580 . + . ID=gene3185;Name=DJ40_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS15995;old_locus_tag=DJ40_3147 NZ_CP008943.1 Protein Homology CDS 3534453 3535580 . + 0 ID=cds3097;Parent=gene3185;Dbxref=Genbank:WP_011193024.1;Name=WP_011193024.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_011193024.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3535573 3536337 . + . ID=gene3186;Name=DJ40_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16000;old_locus_tag=DJ40_3148 NZ_CP008943.1 Protein Homology CDS 3535573 3536337 . + 0 ID=cds3098;Parent=gene3186;Dbxref=Genbank:WP_012303607.1;Name=WP_012303607.1;gbkey=CDS;product=thioesterase;protein_id=WP_012303607.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3536327 3537613 . + . ID=gene3187;Name=DJ40_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16005;old_locus_tag=DJ40_3149 NZ_CP008943.1 Protein Homology CDS 3536327 3537613 . + 0 ID=cds3099;Parent=gene3187;Dbxref=Genbank:WP_038400907.1;Name=WP_038400907.1;gbkey=CDS;product=MFS transporter;protein_id=WP_038400907.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3537613 3539385 . + . ID=gene3188;Name=DJ40_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16010;old_locus_tag=DJ40_3150 NZ_CP008943.1 Protein Homology CDS 3537613 3539385 . + 0 ID=cds3100;Parent=gene3188;Dbxref=Genbank:WP_038400909.1;Name=WP_038400909.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_038400909.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3539378 3541135 . + . ID=gene3189;Name=DJ40_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16015;old_locus_tag=DJ40_3151 NZ_CP008943.1 Protein Homology CDS 3539378 3541135 . + 0 ID=cds3101;Parent=gene3189;Dbxref=Genbank:WP_038400911.1;Name=WP_038400911.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_038400911.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3541458 3542333 . - . ID=gene3190;Name=DJ40_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16020;old_locus_tag=DJ40_3152 NZ_CP008943.1 Protein Homology CDS 3541458 3542333 . - 0 ID=cds3102;Parent=gene3190;Dbxref=Genbank:WP_011193019.1;Name=WP_011193019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011193019.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3542769 3543167 . - . ID=gene3191;Name=DJ40_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16025;old_locus_tag=DJ40_3153 NZ_CP008943.1 Protein Homology CDS 3542769 3543167 . - 0 ID=cds3103;Parent=gene3191;Dbxref=Genbank:WP_038400912.1;Name=WP_038400912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400912.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3544706 3546049 . + . ID=gene3192;Name=DJ40_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16030;old_locus_tag=DJ40_3155 NZ_CP008943.1 Protein Homology CDS 3544706 3546049 . + 0 ID=cds3104;Parent=gene3192;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3547060 3550824 . + . ID=gene3193;Name=DJ40_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16035;old_locus_tag=DJ40_3156 NZ_CP008943.1 Protein Homology CDS 3547060 3550824 . + 0 ID=cds3105;Parent=gene3193;Dbxref=Genbank:WP_011193018.1;Name=WP_011193018.1;gbkey=CDS;product=autotransporter;protein_id=WP_011193018.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3548713 3550874 . + . ID=id256;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3551480 3555250 . + . ID=gene3194;Name=DJ40_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16040;old_locus_tag=DJ40_3157 NZ_CP008943.1 Protein Homology CDS 3551480 3555250 . + 0 ID=cds3106;Parent=gene3194;Dbxref=Genbank:WP_011193017.1;Name=WP_011193017.1;gbkey=CDS;product=autotransporter;protein_id=WP_011193017.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3553144 3555300 . + . ID=id257;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3555836 3558061 . + . ID=gene3195;Name=DJ40_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16045;old_locus_tag=DJ40_3158 NZ_CP008943.1 Protein Homology CDS 3555836 3558061 . + 0 ID=cds3107;Parent=gene3195;Dbxref=Genbank:WP_011193016.1;Name=WP_011193016.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_011193016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3558087 3559406 . + . ID=gene3196;Name=DJ40_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16050;old_locus_tag=DJ40_3159 NZ_CP008943.1 Protein Homology CDS 3558087 3559406 . + 0 ID=cds3108;Parent=gene3196;Dbxref=Genbank:WP_038400914.1;Name=WP_038400914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400914.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3559420 3563898 . + . ID=gene3197;Name=DJ40_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16055;old_locus_tag=DJ40_3160 NZ_CP008943.1 Protein Homology CDS 3559420 3563898 . + 0 ID=cds3109;Parent=gene3197;Dbxref=Genbank:WP_038400916.1;Name=WP_038400916.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038400916.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3562916 3563534 . + . ID=id258;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3563918 3564280 . + . ID=gene3198;Name=DJ40_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16060;old_locus_tag=DJ40_3161 NZ_CP008943.1 Protein Homology CDS 3563918 3564280 . + 0 ID=cds3110;Parent=gene3198;Dbxref=Genbank:WP_012104566.1;Name=WP_012104566.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104566.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3564431 3565270 . + . ID=gene3199;Name=DJ40_RS16065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16065;old_locus_tag=DJ40_3162;partial=true;pseudo=true;start_range=.,3564431 NZ_CP008943.1 Protein Homology CDS 3564431 3565270 . + 0 ID=cds3111;Parent=gene3199;gbkey=CDS;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,3564431;transl_except=(pos:3565172..3565174%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3564450 3565068 . + . ID=id259;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3565189 3565380 . + . ID=gene3200;Name=DJ40_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16070;old_locus_tag=DJ40_3163 NZ_CP008943.1 Protein Homology CDS 3565189 3565380 . + 0 ID=cds3112;Parent=gene3200;Dbxref=Genbank:WP_038400918.1;Name=WP_038400918.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400918.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3565545 3565787 . + . ID=gene3201;Name=DJ40_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16075 NZ_CP008943.1 Protein Homology CDS 3565545 3565787 . + 0 ID=cds3113;Parent=gene3201;Dbxref=Genbank:WP_038401763.1;Name=WP_038401763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401763.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3566331 3566744 . + . ID=gene3202;Name=DJ40_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16080;old_locus_tag=DJ40_3165 NZ_CP008943.1 Protein Homology CDS 3566331 3566744 . + 0 ID=cds3114;Parent=gene3202;Dbxref=Genbank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211404.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3566924 3568303 . - . ID=gene3203;Name=DJ40_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16085;old_locus_tag=DJ40_3166 NZ_CP008943.1 Protein Homology CDS 3566924 3568303 . - 0 ID=cds3115;Parent=gene3203;Dbxref=Genbank:WP_038400920.1;Name=WP_038400920.1;gbkey=CDS;product=Anion transporter;protein_id=WP_038400920.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3568585 3569604 . - . ID=gene3204;Name=DJ40_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16090;old_locus_tag=DJ40_3167 NZ_CP008943.1 Protein Homology CDS 3568585 3569604 . - 0 ID=cds3116;Parent=gene3204;Dbxref=Genbank:WP_012303625.1;Name=WP_012303625.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_012303625.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3569910 3570983 . + . ID=gene3205;Name=DJ40_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16095;old_locus_tag=DJ40_3168 NZ_CP008943.1 Protein Homology CDS 3569910 3570983 . + 0 ID=cds3117;Parent=gene3205;Dbxref=Genbank:WP_038400921.1;Name=WP_038400921.1;gbkey=CDS;product=1%2C4-beta-xylanase;protein_id=WP_038400921.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3571145 3572569 . + . ID=gene3206;Name=DJ40_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16100;old_locus_tag=DJ40_3169 NZ_CP008943.1 Protein Homology CDS 3571145 3572569 . + 0 ID=cds3118;Parent=gene3206;Dbxref=Genbank:WP_038400922.1;Name=WP_038400922.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_038400922.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3572860 3575040 . - . ID=gene3207;Name=DJ40_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16105;old_locus_tag=DJ40_3170 NZ_CP008943.1 Protein Homology CDS 3572860 3575040 . - 0 ID=cds3119;Parent=gene3207;Dbxref=Genbank:WP_002211646.1;Name=WP_002211646.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002211646.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3575112 3576440 . - . ID=gene3208;Name=DJ40_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16110;old_locus_tag=DJ40_3171 NZ_CP008943.1 Protein Homology CDS 3575112 3576440 . - 0 ID=cds3120;Parent=gene3208;Dbxref=Genbank:WP_011193002.1;Name=WP_011193002.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_011193002.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3576437 3578185 . - . ID=gene3209;Name=DJ40_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16115;old_locus_tag=DJ40_3172 NZ_CP008943.1 Protein Homology CDS 3576437 3578185 . - 0 ID=cds3121;Parent=gene3209;Dbxref=Genbank:WP_038400923.1;Name=WP_038400923.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_038400923.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3578182 3579132 . - . ID=gene3210;Name=DJ40_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16120;old_locus_tag=DJ40_3173 NZ_CP008943.1 Protein Homology CDS 3578182 3579132 . - 0 ID=cds3122;Parent=gene3210;Dbxref=Genbank:WP_002211649.1;Name=WP_002211649.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_002211649.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3579116 3580888 . - . ID=gene3211;Name=DJ40_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16125;old_locus_tag=DJ40_3174 NZ_CP008943.1 Protein Homology CDS 3579116 3580888 . - 0 ID=cds3123;Parent=gene3211;Dbxref=Genbank:WP_011192999.1;Name=WP_011192999.1;gbkey=CDS;product=aerobactin synthase IucA;protein_id=WP_011192999.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3581028 3582251 . + . ID=gene3212;Name=DJ40_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16130;old_locus_tag=DJ40_3175 NZ_CP008943.1 Protein Homology CDS 3581028 3582251 . + 0 ID=cds3124;Parent=gene3212;Dbxref=Genbank:WP_002211651.1;Name=WP_002211651.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211651.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3582541 3583374 . - . ID=gene3213;Name=DJ40_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16135;old_locus_tag=DJ40_3176 NZ_CP008943.1 Protein Homology CDS 3582541 3583374 . - 0 ID=cds3125;Parent=gene3213;Dbxref=Genbank:WP_012104578.1;Name=WP_012104578.1;gbkey=CDS;product=dioxygenase;protein_id=WP_012104578.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3583751 3585127 . - . ID=gene3214;Name=DJ40_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16140;old_locus_tag=DJ40_3177 NZ_CP008943.1 Protein Homology CDS 3583751 3585127 . - 0 ID=cds3126;Parent=gene3214;Dbxref=Genbank:WP_038400925.1;Name=WP_038400925.1;gbkey=CDS;product=peptidase;protein_id=WP_038400925.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3585689 3586432 . + . ID=gene3215;Name=DJ40_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16145;old_locus_tag=DJ40_3179 NZ_CP008943.1 Protein Homology CDS 3585689 3586432 . + 0 ID=cds3127;Parent=gene3215;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3586413 3587063 . - . ID=gene3216;Name=DJ40_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16150;old_locus_tag=DJ40_3178 NZ_CP008943.1 Protein Homology CDS 3586413 3587063 . - 0 ID=cds3128;Parent=gene3216;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3588234 3588884 . + . ID=gene3217;Name=DJ40_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16155;old_locus_tag=DJ40_3181 NZ_CP008943.1 Protein Homology CDS 3588234 3588884 . + 0 ID=cds3129;Parent=gene3217;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3589335 3589730 . + . ID=gene3218;Name=DJ40_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16160;old_locus_tag=DJ40_3182 NZ_CP008943.1 Protein Homology CDS 3589335 3589730 . + 0 ID=cds3130;Parent=gene3218;Dbxref=Genbank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3589798 3590061 . + . ID=gene3219;Name=DJ40_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16165;old_locus_tag=DJ40_3183 NZ_CP008943.1 Protein Homology CDS 3589798 3590061 . + 0 ID=cds3131;Parent=gene3219;Dbxref=Genbank:WP_011192994.1;Name=WP_011192994.1;gbkey=CDS;product=transposase;protein_id=WP_011192994.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3590218 3590589 . + . ID=gene3220;Name=DJ40_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16170;old_locus_tag=DJ40_3184 NZ_CP008943.1 Protein Homology CDS 3590218 3590589 . + 0 ID=cds3132;Parent=gene3220;Dbxref=Genbank:WP_012413951.1;Name=WP_012413951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413951.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3590632 3590787 . + . ID=gene3221;Name=DJ40_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16175;old_locus_tag=DJ40_3185 NZ_CP008943.1 Protein Homology CDS 3590632 3590787 . + 0 ID=cds3133;Parent=gene3221;Dbxref=Genbank:WP_038400927.1;Name=WP_038400927.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400927.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3591880 3596945 . + . ID=id260;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3591993 3592493 . + . ID=gene3222;Name=DJ40_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16180;old_locus_tag=DJ40_3186 NZ_CP008943.1 Protein Homology CDS 3591993 3592493 . + 0 ID=cds3134;Parent=gene3222;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3592536 3594086 . + . ID=gene3223;Name=DJ40_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16185;old_locus_tag=DJ40_3187 NZ_CP008943.1 Protein Homology CDS 3592536 3594086 . + 0 ID=cds3135;Parent=gene3223;Dbxref=Genbank:WP_038400928.1;Name=WP_038400928.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_038400928.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3594098 3595450 . + . ID=gene3224;Name=DJ40_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16190;old_locus_tag=DJ40_3188 NZ_CP008943.1 Protein Homology CDS 3594098 3595450 . + 0 ID=cds3136;Parent=gene3224;Dbxref=Genbank:WP_038399996.1;Name=WP_038399996.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038399996.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3595447 3596133 . + . ID=gene3225;Name=DJ40_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16195;old_locus_tag=DJ40_3189 NZ_CP008943.1 Protein Homology CDS 3595447 3596133 . + 0 ID=cds3137;Parent=gene3225;Dbxref=Genbank:WP_038400930.1;Name=WP_038400930.1;gbkey=CDS;product=type VI secretion protein ImpK;protein_id=WP_038400930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3596133 3597869 . + . ID=gene3226;Name=DJ40_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16200;old_locus_tag=DJ40_3190 NZ_CP008943.1 Protein Homology CDS 3596133 3597869 . + 0 ID=cds3138;Parent=gene3226;Dbxref=Genbank:WP_038400932.1;Name=WP_038400932.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400932.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3597549 3601359 . + . ID=id261;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3597873 3598364 . + . ID=gene3227;Name=DJ40_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16205;old_locus_tag=DJ40_3191 NZ_CP008943.1 Protein Homology CDS 3597873 3598364 . + 0 ID=cds3139;Parent=gene3227;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3598752 3601400 . + . ID=gene3228;Name=DJ40_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16210;old_locus_tag=DJ40_3192 NZ_CP008943.1 Protein Homology CDS 3598752 3601400 . + 0 ID=cds3140;Parent=gene3228;Dbxref=Genbank:WP_038400934.1;Name=WP_038400934.1;gbkey=CDS;product=ATPase;protein_id=WP_038400934.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3601393 3605227 . + . ID=id262;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3601397 3603745 . + . ID=gene3229;Name=DJ40_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16215;old_locus_tag=DJ40_3193 NZ_CP008943.1 Protein Homology CDS 3601397 3603745 . + 0 ID=cds3141;Parent=gene3229;Dbxref=Genbank:WP_038400935.1;Name=WP_038400935.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038400935.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3603761 3606058 . + . ID=gene3230;Name=DJ40_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16220;old_locus_tag=DJ40_3194 NZ_CP008943.1 Protein Homology CDS 3603761 3606058 . + 0 ID=cds3142;Parent=gene3230;Dbxref=Genbank:WP_038400937.1;Name=WP_038400937.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400937.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3606045 3606812 . + . ID=gene3231;Name=DJ40_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16225;old_locus_tag=DJ40_3195 NZ_CP008943.1 Protein Homology CDS 3606045 3606812 . + 0 ID=cds3143;Parent=gene3231;Dbxref=Genbank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3606847 3607482 . + . ID=id263;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3607062 3607184 . + . ID=gene3232;Name=DJ40_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16230 NZ_CP008943.1 Protein Homology CDS 3607062 3607184 . + 0 ID=cds3144;Parent=gene3232;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3607238 3607483 . + . ID=gene3233;Name=DJ40_RS16235;end_range=3607483,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16235;old_locus_tag=DJ40_3196;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3607238 3607483 . + 0 ID=cds3145;Parent=gene3233;end_range=3607483,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3607501 3608151 . + . ID=id264;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3608107 3608721 . + . ID=gene3234;Name=DJ40_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16240;old_locus_tag=DJ40_3198 NZ_CP008943.1 Protein Homology CDS 3608107 3608721 . + 0 ID=cds3146;Parent=gene3234;Dbxref=Genbank:WP_038400939.1;Name=WP_038400939.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038400939.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3608239 3608645 . + . ID=id265;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3608736 3610958 . + . ID=gene3235;Name=DJ40_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16245;old_locus_tag=DJ40_3199 NZ_CP008943.1 Protein Homology CDS 3608736 3610958 . + 0 ID=cds3147;Parent=gene3235;Dbxref=Genbank:WP_002210011.1;Name=WP_002210011.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_002210011.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3611103 3611450 . + . ID=gene3236;Name=DJ40_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16250 NZ_CP008943.1 Protein Homology CDS 3611103 3611450 . + 0 ID=cds3148;Parent=gene3236;Dbxref=Genbank:WP_016590715.1;Name=WP_016590715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016590715.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3611664 3611858 . + . ID=gene3237;Name=DJ40_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16255 NZ_CP008943.1 Protein Homology CDS 3611664 3611858 . + 0 ID=cds3149;Parent=gene3237;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3611826 3612460 . + . ID=id266;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3612040 3612162 . + . ID=gene3238;Name=DJ40_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16260 NZ_CP008943.1 Protein Homology CDS 3612040 3612162 . + 0 ID=cds3150;Parent=gene3238;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3612216 3612584 . + . ID=gene3239;Name=DJ40_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16265;old_locus_tag=DJ40_3202 NZ_CP008943.1 Protein Homology CDS 3612216 3612584 . + 0 ID=cds3151;Parent=gene3239;Dbxref=Genbank:WP_012104591.1;Name=WP_012104591.1;gbkey=CDS;product=transposase;protein_id=WP_012104591.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3612587 3613237 . + . ID=id267;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3613193 3613828 . + . ID=gene3240;Name=DJ40_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16270;old_locus_tag=DJ40_3204 NZ_CP008943.1 Protein Homology CDS 3613193 3613828 . + 0 ID=cds3152;Parent=gene3240;Dbxref=Genbank:WP_038400942.1;Name=WP_038400942.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038400942.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3613346 3613792 . + . ID=id268;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3613852 3614160 . + . ID=gene3241;Name=DJ40_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16275;old_locus_tag=DJ40_3205 NZ_CP008943.1 Protein Homology CDS 3613852 3614160 . + 0 ID=cds3153;Parent=gene3241;Dbxref=Genbank:WP_002228972.1;Name=WP_002228972.1;gbkey=CDS;product=integrase;protein_id=WP_002228972.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3614618 3614857 . - . ID=gene3242;Name=DJ40_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16280;old_locus_tag=DJ40_3206 NZ_CP008943.1 Protein Homology CDS 3614618 3614857 . - 0 ID=cds3154;Parent=gene3242;Dbxref=Genbank:WP_004722488.1;Name=WP_004722488.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_004722488.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3614892 3615215 . - . ID=gene3243;Name=DJ40_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16285;old_locus_tag=DJ40_3207 NZ_CP008943.1 Protein Homology CDS 3614892 3615215 . - 0 ID=cds3155;Parent=gene3243;Dbxref=Genbank:WP_004722490.1;Name=WP_004722490.1;gbkey=CDS;product=RelE toxin protein;protein_id=WP_004722490.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3615413 3616279 . - . ID=gene3244;Name=DJ40_RS16290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16290;pseudo=true NZ_CP008943.1 Protein Homology CDS 3615413 3616279 . - 0 ID=cds3156;Parent=gene3244;gbkey=CDS;product=restriction endonuclease subunit M;pseudo=true;transl_except=(pos:complement(3615986..3615988)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 3616363 3616695 . - . ID=gene3245;Name=DJ40_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16295;old_locus_tag=DJ40_3210 NZ_CP008943.1 Protein Homology CDS 3616363 3616695 . - 0 ID=cds3157;Parent=gene3245;Dbxref=Genbank:WP_038400945.1;Name=WP_038400945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400945.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3616707 3617063 . - . ID=gene3246;Name=DJ40_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16300;old_locus_tag=DJ40_3211 NZ_CP008943.1 Protein Homology CDS 3616707 3617063 . - 0 ID=cds3158;Parent=gene3246;Dbxref=Genbank:WP_038400946.1;Name=WP_038400946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400946.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3617119 3617451 . - . ID=gene3247;Name=DJ40_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16305 NZ_CP008943.1 Protein Homology CDS 3617119 3617451 . - 0 ID=cds3159;Parent=gene3247;Dbxref=Genbank:WP_049862791.1;Name=WP_049862791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862791.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3617445 3617918 . - . ID=gene3248;Name=DJ40_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16310;old_locus_tag=DJ40_3213 NZ_CP008943.1 Protein Homology CDS 3617445 3617918 . - 0 ID=cds3160;Parent=gene3248;Dbxref=Genbank:WP_038401772.1;Name=WP_038401772.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_038401772.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3617950 3618381 . - . ID=gene3249;Name=DJ40_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16315;old_locus_tag=DJ40_3214 NZ_CP008943.1 Protein Homology CDS 3617950 3618381 . - 0 ID=cds3161;Parent=gene3249;Dbxref=Genbank:WP_038400948.1;Name=WP_038400948.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400948.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3618989 3619540 . - . ID=gene3250;Name=DJ40_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16320;old_locus_tag=DJ40_3215 NZ_CP008943.1 Protein Homology CDS 3618989 3619540 . - 0 ID=cds3162;Parent=gene3250;Dbxref=Genbank:WP_038400949.1;Name=WP_038400949.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400949.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3620278 3620739 . - . ID=gene3251;Name=DJ40_RS16325;end_range=3620739,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16325;old_locus_tag=DJ40_3216;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3620278 3620739 . - 0 ID=cds3163;Parent=gene3251;end_range=3620739,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3621346 3621585 . + . ID=gene3252;Name=DJ40_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16330;old_locus_tag=DJ40_3217 NZ_CP008943.1 Protein Homology CDS 3621346 3621585 . + 0 ID=cds3164;Parent=gene3252;Dbxref=Genbank:WP_038400951.1;Name=WP_038400951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400951.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3621640 3621942 . + . ID=gene3253;Name=DJ40_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16335;old_locus_tag=DJ40_3218 NZ_CP008943.1 Protein Homology CDS 3621640 3621942 . + 0 ID=cds3165;Parent=gene3253;Dbxref=Genbank:WP_038400954.1;Name=WP_038400954.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_038400954.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3621911 3622879 . + . ID=gene3254;Name=DJ40_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16340;old_locus_tag=DJ40_3219 NZ_CP008943.1 Protein Homology CDS 3621911 3622879 . + 0 ID=cds3166;Parent=gene3254;Dbxref=Genbank:WP_038400955.1;Name=WP_038400955.1;gbkey=CDS;product=DNA polymerase;protein_id=WP_038400955.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3623032 3624030 . - . ID=gene3255;Name=DJ40_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16345;old_locus_tag=DJ40_3220 NZ_CP008943.1 Protein Homology CDS 3623032 3624030 . - 0 ID=cds3167;Parent=gene3255;Dbxref=Genbank:WP_038400957.1;Name=WP_038400957.1;gbkey=CDS;product=integrase;protein_id=WP_038400957.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3624027 3624623 . - . ID=gene3256;Name=DJ40_RS16350;end_range=3624623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16350;old_locus_tag=DJ40_3221;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3624027 3624623 . - 0 ID=cds3168;Parent=gene3256;end_range=3624623,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3625426 3625710 . + . ID=gene3257;Name=DJ40_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16355;old_locus_tag=DJ40_3222 NZ_CP008943.1 Protein Homology CDS 3625426 3625710 . + 0 ID=cds3169;Parent=gene3257;Dbxref=Genbank:WP_032815010.1;Name=WP_032815010.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032815010.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3625969 3626310 . + . ID=gene3258;Name=DJ40_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16360;old_locus_tag=DJ40_3224 NZ_CP008943.1 GeneMarkS+ CDS 3625969 3626310 . + 0 ID=cds3170;Parent=gene3258;Dbxref=Genbank:WP_038400961.1;Name=WP_038400961.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400961.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3626681 3627697 . - . ID=gene3259;Name=DJ40_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16365;old_locus_tag=DJ40_3225 NZ_CP008943.1 Protein Homology CDS 3626681 3627697 . - 0 ID=cds3171;Parent=gene3259;Dbxref=Genbank:WP_038400963.1;Name=WP_038400963.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3627687 3627983 . - . ID=gene3260;Name=DJ40_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16370 NZ_CP008943.1 Protein Homology CDS 3627687 3627983 . - 0 ID=cds3172;Parent=gene3260;Dbxref=Genbank:WP_038401781.1;Name=WP_038401781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401781.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3628757 3630532 . - . ID=gene3261;Name=DJ40_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16375;old_locus_tag=DJ40_3227 NZ_CP008943.1 Protein Homology CDS 3628757 3630532 . - 0 ID=cds3173;Parent=gene3261;Dbxref=Genbank:WP_038400964.1;Name=WP_038400964.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038400964.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3630532 3631065 . - . ID=gene3262;Name=DJ40_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16380;old_locus_tag=DJ40_3228 NZ_CP008943.1 Protein Homology CDS 3630532 3631065 . - 0 ID=cds3174;Parent=gene3262;Dbxref=Genbank:WP_049862792.1;Name=WP_049862792.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_049862792.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3631052 3634420 . - . ID=gene3263;Name=DJ40_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16385;old_locus_tag=DJ40_3229 NZ_CP008943.1 Protein Homology CDS 3631052 3634420 . - 0 ID=cds3175;Parent=gene3263;Dbxref=Genbank:WP_038400966.1;Name=WP_038400966.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_038400966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3634413 3635825 . - . ID=gene3264;Name=DJ40_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16390;old_locus_tag=DJ40_3230 NZ_CP008943.1 Protein Homology CDS 3634413 3635825 . - 0 ID=cds3176;Parent=gene3264;Dbxref=Genbank:WP_038400968.1;Name=WP_038400968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400968.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3635825 3636079 . - . ID=gene3265;Name=DJ40_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16395;old_locus_tag=DJ40_3231 NZ_CP008943.1 Protein Homology CDS 3635825 3636079 . - 0 ID=cds3177;Parent=gene3265;Dbxref=Genbank:WP_038400969.1;Name=WP_038400969.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400969.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3636101 3636559 . - . ID=gene3266;Name=DJ40_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16400;old_locus_tag=DJ40_3232 NZ_CP008943.1 Protein Homology CDS 3636101 3636559 . - 0 ID=cds3178;Parent=gene3266;Dbxref=Genbank:WP_038400971.1;Name=WP_038400971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3636559 3637311 . - . ID=gene3267;Name=DJ40_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16405;old_locus_tag=DJ40_3233 NZ_CP008943.1 Protein Homology CDS 3636559 3637311 . - 0 ID=cds3179;Parent=gene3267;Dbxref=Genbank:WP_038400974.1;Name=WP_038400974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400974.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3637324 3639435 . - . ID=gene3268;Name=DJ40_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16410;old_locus_tag=DJ40_3234 NZ_CP008943.1 Protein Homology CDS 3637324 3639435 . - 0 ID=cds3180;Parent=gene3268;Dbxref=Genbank:WP_038400976.1;Name=WP_038400976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400976.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3639511 3640260 . - . ID=gene3269;Name=DJ40_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16415;old_locus_tag=DJ40_3235 NZ_CP008943.1 Protein Homology CDS 3639511 3640260 . - 0 ID=cds3181;Parent=gene3269;Dbxref=Genbank:WP_038400978.1;Name=WP_038400978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400978.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3640273 3642381 . - . ID=gene3270;Name=DJ40_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16420;old_locus_tag=DJ40_3236 NZ_CP008943.1 Protein Homology CDS 3640273 3642381 . - 0 ID=cds3182;Parent=gene3270;Dbxref=Genbank:WP_038400979.1;Name=WP_038400979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400979.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3642381 3644891 . - . ID=gene3271;Name=DJ40_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16425;old_locus_tag=DJ40_3237 NZ_CP008943.1 Protein Homology CDS 3642381 3644891 . - 0 ID=cds3183;Parent=gene3271;Dbxref=Genbank:WP_038400981.1;Name=WP_038400981.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038400981.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3645791 3646357 . + . ID=gene3272;Name=DJ40_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16430;old_locus_tag=DJ40_3239 NZ_CP008943.1 Protein Homology CDS 3645791 3646357 . + 0 ID=cds3184;Parent=gene3272;Dbxref=Genbank:WP_038400983.1;Name=WP_038400983.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400983.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3646974 3647468 . + . ID=gene3273;Name=DJ40_RS16435;end_range=3647468,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16435;old_locus_tag=DJ40_3241;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 3646974 3647468 . + 0 ID=cds3185;Parent=gene3273;end_range=3647468,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3648038 3649597 . + . ID=gene3274;Name=DJ40_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16440;old_locus_tag=DJ40_3242 NZ_CP008943.1 Protein Homology CDS 3648038 3649597 . + 0 ID=cds3186;Parent=gene3274;Dbxref=Genbank:WP_038401789.1;Name=WP_038401789.1;gbkey=CDS;product=recombinase;protein_id=WP_038401789.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3649594 3650484 . + . ID=gene3275;Name=DJ40_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16445;old_locus_tag=DJ40_3243 NZ_CP008943.1 Protein Homology CDS 3649594 3650484 . + 0 ID=cds3187;Parent=gene3275;Dbxref=Genbank:WP_038400984.1;Name=WP_038400984.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_038400984.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3650477 3651361 . + . ID=gene3276;Name=DJ40_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16450;old_locus_tag=DJ40_3244 NZ_CP008943.1 Protein Homology CDS 3650477 3651361 . + 0 ID=cds3188;Parent=gene3276;Dbxref=Genbank:WP_038400985.1;Name=WP_038400985.1;gbkey=CDS;product=RepB plasmid partitioning protein;protein_id=WP_038400985.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3651678 3652334 . - . ID=gene3277;Name=DJ40_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16455;old_locus_tag=DJ40_3245 NZ_CP008943.1 Protein Homology CDS 3651678 3652334 . - 0 ID=cds3189;Parent=gene3277;Dbxref=Genbank:WP_038401792.1;Name=WP_038401792.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401792.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3652626 3652856 . - . ID=gene3278;Name=DJ40_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16460;old_locus_tag=DJ40_3246 NZ_CP008943.1 Protein Homology CDS 3652626 3652856 . - 0 ID=cds3190;Parent=gene3278;Dbxref=Genbank:WP_038401795.1;Name=WP_038401795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401795.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3653864 3654364 . + . ID=gene3279;Name=DJ40_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16465;old_locus_tag=DJ40_3247 NZ_CP008943.1 Protein Homology CDS 3653864 3654364 . + 0 ID=cds3191;Parent=gene3279;Dbxref=Genbank:WP_038400986.1;Name=WP_038400986.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038400986.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3654407 3655972 . + . ID=gene3280;Name=DJ40_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16470;old_locus_tag=DJ40_3248 NZ_CP008943.1 Protein Homology CDS 3654407 3655972 . + 0 ID=cds3192;Parent=gene3280;Dbxref=Genbank:WP_038400987.1;Name=WP_038400987.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_038400987.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3655984 3657336 . + . ID=gene3281;Name=DJ40_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16475;old_locus_tag=DJ40_3249 NZ_CP008943.1 Protein Homology CDS 3655984 3657336 . + 0 ID=cds3193;Parent=gene3281;Dbxref=Genbank:WP_038400988.1;Name=WP_038400988.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038400988.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3657333 3658019 . + . ID=gene3282;Name=DJ40_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16480;old_locus_tag=DJ40_3250 NZ_CP008943.1 Protein Homology CDS 3657333 3658019 . + 0 ID=cds3194;Parent=gene3282;Dbxref=Genbank:WP_038400989.1;Name=WP_038400989.1;gbkey=CDS;product=type VI secretion protein ImpK;protein_id=WP_038400989.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3658019 3659734 . + . ID=gene3283;Name=DJ40_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16485;old_locus_tag=DJ40_3251 NZ_CP008943.1 Protein Homology CDS 3658019 3659734 . + 0 ID=cds3195;Parent=gene3283;Dbxref=Genbank:WP_038400991.1;Name=WP_038400991.1;gbkey=CDS;product=membrane protein;protein_id=WP_038400991.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3659411 3659583 . + . ID=id269;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3659620 3660213 . + . ID=id270;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3659738 3660229 . + . ID=gene3284;Name=DJ40_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16490;old_locus_tag=DJ40_3252 NZ_CP008943.1 Protein Homology CDS 3659738 3660229 . + 0 ID=cds3196;Parent=gene3284;Dbxref=Genbank:WP_038400993.1;Name=WP_038400993.1;gbkey=CDS;product=Hcp family T6SS protein CtsH1;protein_id=WP_038400993.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3660413 3663061 . + . ID=gene3285;Name=DJ40_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16495;old_locus_tag=DJ40_3253 NZ_CP008943.1 Protein Homology CDS 3660413 3663061 . + 0 ID=cds3197;Parent=gene3285;Dbxref=Genbank:WP_038400994.1;Name=WP_038400994.1;gbkey=CDS;product=ATPase;protein_id=WP_038400994.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3663058 3665397 . + . ID=gene3286;Name=DJ40_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16500;old_locus_tag=DJ40_3254 NZ_CP008943.1 Protein Homology CDS 3663058 3665397 . + 0 ID=cds3198;Parent=gene3286;Dbxref=Genbank:WP_038400996.1;Name=WP_038400996.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038400996.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3665409 3666353 . + . ID=gene3287;Name=DJ40_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16505;old_locus_tag=DJ40_3255 NZ_CP008943.1 Protein Homology CDS 3665409 3666353 . + 0 ID=cds3199;Parent=gene3287;Dbxref=Genbank:WP_049862793.1;Name=WP_049862793.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862793.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3666343 3669408 . + . ID=gene3288;Name=DJ40_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16510;old_locus_tag=DJ40_3256 NZ_CP008943.1 Protein Homology CDS 3666343 3669408 . + 0 ID=cds3200;Parent=gene3288;Dbxref=Genbank:WP_038400998.1;Name=WP_038400998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038400998.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3669457 3670238 . + . ID=gene3289;Name=DJ40_RS16515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16515;pseudo=true NZ_CP008943.1 Protein Homology CDS 3669457 3670238 . + 0 ID=cds3201;Parent=gene3289;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3670428 3671660 . + . ID=gene3290;Name=DJ40_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16520;old_locus_tag=DJ40_3259 NZ_CP008943.1 Protein Homology CDS 3670428 3671660 . + 0 ID=cds3202;Parent=gene3290;Dbxref=Genbank:WP_038401000.1;Name=WP_038401000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401000.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3671657 3675079 . + . ID=gene3291;Name=DJ40_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16525;old_locus_tag=DJ40_3260 NZ_CP008943.1 Protein Homology CDS 3671657 3675079 . + 0 ID=cds3203;Parent=gene3291;Dbxref=Genbank:WP_038401002.1;Name=WP_038401002.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_038401002.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3675121 3676725 . + . ID=gene3292;Name=DJ40_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16530;old_locus_tag=DJ40_3261 NZ_CP008943.1 Protein Homology CDS 3675121 3676725 . + 0 ID=cds3204;Parent=gene3292;Dbxref=Genbank:WP_038401004.1;Name=WP_038401004.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038401004.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3676837 3679695 . + . ID=id271;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3676838 3678602 . + . ID=gene3293;Name=DJ40_RS16535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16535;pseudo=true NZ_CP008943.1 Protein Homology CDS 3676838 3678602 . + 0 ID=cds3205;Parent=gene3293;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type VI secretion protein ImpG;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3678566 3679651 . + . ID=gene3294;Name=DJ40_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16540;old_locus_tag=DJ40_3264 NZ_CP008943.1 Protein Homology CDS 3678566 3679651 . + 0 ID=cds3206;Parent=gene3294;Dbxref=Genbank:WP_012304271.1;Name=WP_012304271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304271.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3679626 3680228 . + . ID=gene3295;Name=DJ40_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16545;old_locus_tag=DJ40_3265 NZ_CP008943.1 Protein Homology CDS 3679626 3680228 . + 0 ID=cds3207;Parent=gene3295;Dbxref=Genbank:WP_038401006.1;Name=WP_038401006.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038401006.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3680228 3680677 . + . ID=gene3296;Name=DJ40_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16550;old_locus_tag=DJ40_3266 NZ_CP008943.1 Protein Homology CDS 3680228 3680677 . + 0 ID=cds3208;Parent=gene3296;Dbxref=Genbank:WP_038401008.1;Name=WP_038401008.1;gbkey=CDS;product=type VI secretion system lysozyme-like protein;protein_id=WP_038401008.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3680746 3681162 . + . ID=gene3297;Name=DJ40_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21930;old_locus_tag=DJ40_3267 NZ_CP008943.1 Protein Homology CDS 3680746 3681162 . + 0 ID=cds3209;Parent=gene3297;Dbxref=Genbank:WP_049862794.1;Name=WP_049862794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862794.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3681278 3682684 . + . ID=gene3298;Name=DJ40_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16560;old_locus_tag=DJ40_3268 NZ_CP008943.1 Protein Homology CDS 3681278 3682684 . + 0 ID=cds3210;Parent=gene3298;Dbxref=Genbank:WP_038401009.1;Name=WP_038401009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401009.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3682782 3683423 . + . ID=gene3299;Name=DJ40_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16565;old_locus_tag=DJ40_3269 NZ_CP008943.1 Protein Homology CDS 3682782 3683423 . + 0 ID=cds3211;Parent=gene3299;Dbxref=Genbank:WP_038401010.1;Name=WP_038401010.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401010.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3683955 3684902 . + . ID=gene3300;Name=DJ40_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16570;old_locus_tag=DJ40_3270 NZ_CP008943.1 GeneMarkS+ CDS 3683955 3684902 . + 0 ID=cds3212;Parent=gene3300;Dbxref=Genbank:WP_038401012.1;Name=WP_038401012.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401012.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3684965 3685242 . + . ID=gene3301;Name=DJ40_RS16575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16575;pseudo=true NZ_CP008943.1 Protein Homology CDS 3684965 3685242 . + 0 ID=cds3213;Parent=gene3301;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:3685075..3685077%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 3685326 3685517 . - . ID=gene3302;Name=DJ40_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16580;old_locus_tag=DJ40_3272 NZ_CP008943.1 GeneMarkS+ CDS 3685326 3685517 . - 0 ID=cds3214;Parent=gene3302;Dbxref=Genbank:WP_038401014.1;Name=WP_038401014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401014.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3685565 3687979 . + . ID=gene3303;Name=DJ40_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16585;old_locus_tag=DJ40_3273 NZ_CP008943.1 Protein Homology CDS 3685565 3687979 . + 0 ID=cds3215;Parent=gene3303;Dbxref=Genbank:WP_038401015.1;Name=WP_038401015.1;gbkey=CDS;product=ATPase;protein_id=WP_038401015.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3687969 3688538 . + . ID=gene3304;Name=DJ40_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16590;old_locus_tag=DJ40_3274 NZ_CP008943.1 Protein Homology CDS 3687969 3688538 . + 0 ID=cds3216;Parent=gene3304;Dbxref=Genbank:WP_038401017.1;Name=WP_038401017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401017.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3688531 3691287 . + . ID=gene3305;Name=DJ40_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16595;old_locus_tag=DJ40_3275 NZ_CP008943.1 Protein Homology CDS 3688531 3691287 . + 0 ID=cds3217;Parent=gene3305;Dbxref=Genbank:WP_038401019.1;Name=WP_038401019.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_038401019.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3691516 3692724 . - . ID=gene3306;Name=DJ40_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16600;old_locus_tag=DJ40_3276 NZ_CP008943.1 Protein Homology CDS 3691516 3692724 . - 0 ID=cds3218;Parent=gene3306;Dbxref=Genbank:WP_038401020.1;Name=WP_038401020.1;gbkey=CDS;product=integrase;protein_id=WP_038401020.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3692899 3692999 . + . ID=id272;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3692901 3692976 . - . ID=gene3307;Name=DJ40_RS16605;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS16605;old_locus_tag=DJ40_3277 NZ_CP008943.1 tRNAscan-SE tRNA 3692901 3692976 . - . ID=rna79;Parent=gene3307;anticodon=(pos:complement(3692941..3692943));gbkey=tRNA;product=tRNA-Phe NZ_CP008943.1 tRNAscan-SE exon 3692901 3692976 . - . ID=id273;Parent=rna79;anticodon=(pos:complement(3692941..3692943));gbkey=tRNA;product=tRNA-Phe NZ_CP008943.1 RefSeq gene 3693645 3695807 . + . ID=gene3308;Name=DJ40_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16610;old_locus_tag=DJ40_3278 NZ_CP008943.1 Protein Homology CDS 3693645 3695807 . + 0 ID=cds3219;Parent=gene3308;Dbxref=Genbank:WP_038401022.1;Name=WP_038401022.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_038401022.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3696388 3697347 . + . ID=gene3309;Name=DJ40_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16615;old_locus_tag=DJ40_3279 NZ_CP008943.1 Protein Homology CDS 3696388 3697347 . + 0 ID=cds3220;Parent=gene3309;Dbxref=Genbank:WP_012104655.1;Name=WP_012104655.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_012104655.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3697393 3698892 . + . ID=gene3310;Name=DJ40_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16620;old_locus_tag=DJ40_3280 NZ_CP008943.1 Protein Homology CDS 3697393 3698892 . + 0 ID=cds3221;Parent=gene3310;Dbxref=Genbank:WP_011192984.1;Name=WP_011192984.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_011192984.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3698973 3699908 . + . ID=gene3311;Name=DJ40_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16625;old_locus_tag=DJ40_3281 NZ_CP008943.1 Protein Homology CDS 3698973 3699908 . + 0 ID=cds3222;Parent=gene3311;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3699973 3702007 . - . ID=gene3312;Name=DJ40_RS16630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16630;pseudo=true NZ_CP008943.1 Protein Homology CDS 3699973 3702007 . - 0 ID=cds3223;Parent=gene3312;exception=annotated by transcript or proteomic data;gbkey=CDS;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3702096 3703196 . - . ID=gene3313;Name=DJ40_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16635;old_locus_tag=DJ40_3284 NZ_CP008943.1 Protein Homology CDS 3702096 3703196 . - 0 ID=cds3224;Parent=gene3313;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3703496 3704572 . - . ID=gene3314;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=DJ40_RS16640;old_locus_tag=DJ40_3285 NZ_CP008943.1 Protein Homology CDS 3703496 3704572 . - 0 ID=cds3225;Parent=gene3314;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3704612 3704720 . + . ID=id274;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 3704736 3704844 . + . ID=id275;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3704879 3705151 . - . ID=gene3315;Name=DJ40_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16645;old_locus_tag=DJ40_3286 NZ_CP008943.1 Protein Homology CDS 3704879 3705151 . - 0 ID=cds3226;Parent=gene3315;Dbxref=Genbank:WP_002230648.1;Name=WP_002230648.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002230648.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3705329 3706444 . - . ID=gene3316;Name=DJ40_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16650;old_locus_tag=DJ40_3287 NZ_CP008943.1 Protein Homology CDS 3705329 3706444 . - 0 ID=cds3227;Parent=gene3316;Dbxref=Genbank:WP_012104658.1;Name=WP_012104658.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_012104658.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3706857 3707576 . + . ID=gene3317;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=DJ40_RS16655;old_locus_tag=DJ40_3288 NZ_CP008943.1 Protein Homology CDS 3706857 3707576 . + 0 ID=cds3228;Parent=gene3317;Dbxref=Genbank:WP_038401023.1;Name=WP_038401023.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N7)-methyltransferase;protein_id=WP_038401023.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3707576 3707902 . + . ID=gene3318;Name=DJ40_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16660;old_locus_tag=DJ40_3289 NZ_CP008943.1 Protein Homology CDS 3707576 3707902 . + 0 ID=cds3229;Parent=gene3318;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3708013 3708939 . + . ID=gene3319;Name=DJ40_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16665;old_locus_tag=DJ40_3290 NZ_CP008943.1 Protein Homology CDS 3708013 3708939 . + 0 ID=cds3230;Parent=gene3319;Dbxref=Genbank:WP_038401026.1;Name=WP_038401026.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_038401026.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3709051 3709785 . + . ID=gene3320;Name=DJ40_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16670;old_locus_tag=DJ40_3291 NZ_CP008943.1 Protein Homology CDS 3709051 3709785 . + 0 ID=cds3231;Parent=gene3320;Dbxref=Genbank:WP_012303643.1;Name=WP_012303643.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303643.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3710289 3719600 . + . ID=gene3321;Name=DJ40_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16675;old_locus_tag=DJ40_3292 NZ_CP008943.1 Protein Homology CDS 3710289 3719600 . + 0 ID=cds3232;Parent=gene3321;Dbxref=Genbank:WP_038401028.1;Name=WP_038401028.1;gbkey=CDS;product=pore forming RTX toxin family protein;protein_id=WP_038401028.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3719769 3720899 . - . ID=gene3322;Name=DJ40_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16680;old_locus_tag=DJ40_3293 NZ_CP008943.1 Protein Homology CDS 3719769 3720899 . - 0 ID=cds3233;Parent=gene3322;Dbxref=Genbank:WP_002209987.1;Name=WP_002209987.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002209987.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3720892 3721485 . - . ID=gene3323;Name=DJ40_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16685;old_locus_tag=DJ40_3294 NZ_CP008943.1 Protein Homology CDS 3720892 3721485 . - 0 ID=cds3234;Parent=gene3323;Dbxref=Genbank:WP_011192977.1;Name=WP_011192977.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_011192977.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3721585 3721875 . - . ID=gene3324;Name=DJ40_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16690;old_locus_tag=DJ40_3295 NZ_CP008943.1 Protein Homology CDS 3721585 3721875 . - 0 ID=cds3235;Parent=gene3324;Dbxref=Genbank:WP_011192976.1;Name=WP_011192976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192976.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3721872 3722426 . - . ID=gene3325;Name=DJ40_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16695;old_locus_tag=DJ40_3296 NZ_CP008943.1 Protein Homology CDS 3721872 3722426 . - 0 ID=cds3236;Parent=gene3325;Dbxref=Genbank:WP_011192975.1;Name=WP_011192975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192975.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3722714 3723535 . - . ID=gene3326;Name=DJ40_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16700;old_locus_tag=DJ40_3297 NZ_CP008943.1 Protein Homology CDS 3722714 3723535 . - 0 ID=cds3237;Parent=gene3326;Dbxref=Genbank:WP_011192974.1;Name=WP_011192974.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_011192974.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3723668 3724366 . - . ID=gene3327;Name=DJ40_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16705;old_locus_tag=DJ40_3298 NZ_CP008943.1 Protein Homology CDS 3723668 3724366 . - 0 ID=cds3238;Parent=gene3327;Dbxref=Genbank:WP_011192973.1;Name=WP_011192973.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_011192973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3724386 3725510 . + . ID=gene3328;Name=DJ40_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16710;old_locus_tag=DJ40_3299 NZ_CP008943.1 Protein Homology CDS 3724386 3725510 . + 0 ID=cds3239;Parent=gene3328;Dbxref=Genbank:WP_002209981.1;Name=WP_002209981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209981.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3725619 3726734 . - . ID=gene3329;Name=DJ40_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16715;old_locus_tag=DJ40_3300 NZ_CP008943.1 Protein Homology CDS 3725619 3726734 . - 0 ID=cds3240;Parent=gene3329;Dbxref=Genbank:WP_038401031.1;Name=WP_038401031.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_038401031.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3726738 3727622 . - . ID=gene3330;Name=DJ40_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16720;old_locus_tag=DJ40_3301 NZ_CP008943.1 Protein Homology CDS 3726738 3727622 . - 0 ID=cds3241;Parent=gene3330;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3727802 3728224 . - . ID=gene3331;Name=DJ40_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16725;old_locus_tag=DJ40_3302 NZ_CP008943.1 Protein Homology CDS 3727802 3728224 . - 0 ID=cds3242;Parent=gene3331;Dbxref=Genbank:WP_002209978.1;Name=WP_002209978.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_002209978.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3728224 3728787 . - . ID=gene3332;Name=DJ40_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16730;old_locus_tag=DJ40_3303 NZ_CP008943.1 Protein Homology CDS 3728224 3728787 . - 0 ID=cds3243;Parent=gene3332;Dbxref=Genbank:WP_011192971.1;Name=WP_011192971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3728903 3729862 . - . ID=gene3333;Name=DJ40_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16735;old_locus_tag=DJ40_3304 NZ_CP008943.1 Protein Homology CDS 3728903 3729862 . - 0 ID=cds3244;Parent=gene3333;Dbxref=Genbank:WP_012104668.1;Name=WP_012104668.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_012104668.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3729888 3730619 . - . ID=gene3334;Name=DJ40_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16740;old_locus_tag=DJ40_3305 NZ_CP008943.1 Protein Homology CDS 3729888 3730619 . - 0 ID=cds3245;Parent=gene3334;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3730728 3730955 . - . ID=gene3335;Name=DJ40_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16745 NZ_CP008943.1 Protein Homology CDS 3730728 3730955 . - 0 ID=cds3246;Parent=gene3335;Dbxref=Genbank:WP_032465912.1;Name=WP_032465912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465912.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3730934 3731641 . - . ID=gene3336;Name=DJ40_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16750;old_locus_tag=DJ40_3306 NZ_CP008943.1 Protein Homology CDS 3730934 3731641 . - 0 ID=cds3247;Parent=gene3336;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3731739 3732251 . - . ID=gene3337;Name=DJ40_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16755;old_locus_tag=DJ40_3307 NZ_CP008943.1 Protein Homology CDS 3731739 3732251 . - 0 ID=cds3248;Parent=gene3337;Dbxref=Genbank:WP_012104670.1;Name=WP_012104670.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_012104670.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3732443 3733597 . - . ID=gene3338;Name=DJ40_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16760;old_locus_tag=DJ40_3308 NZ_CP008943.1 Protein Homology CDS 3732443 3733597 . - 0 ID=cds3249;Parent=gene3338;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3734822 3736801 . + . ID=gene3339;Name=DJ40_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16765;old_locus_tag=DJ40_3310 NZ_CP008943.1 Protein Homology CDS 3734822 3736801 . + 0 ID=cds3250;Parent=gene3339;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3736961 3737281 . + . ID=gene3340;Name=DJ40_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16770;old_locus_tag=DJ40_3311 NZ_CP008943.1 Protein Homology CDS 3736961 3737281 . + 0 ID=cds3251;Parent=gene3340;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3737360 3737530 . + . ID=id276;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3737578 3738330 . - . ID=gene3341;Name=DJ40_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16775;old_locus_tag=DJ40_3312 NZ_CP008943.1 Protein Homology CDS 3737578 3738330 . - 0 ID=cds3252;Parent=gene3341;Dbxref=Genbank:WP_038401035.1;Name=WP_038401035.1;gbkey=CDS;product=metalloprotease;protein_id=WP_038401035.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3738821 3740815 . + . ID=gene3342;Name=DJ40_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16780;old_locus_tag=DJ40_3313 NZ_CP008943.1 Protein Homology CDS 3738821 3740815 . + 0 ID=cds3253;Parent=gene3342;Dbxref=Genbank:WP_011192968.1;Name=WP_011192968.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_011192968.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3741194 3742210 . + . ID=gene3343;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=DJ40_RS16785;old_locus_tag=DJ40_3314 NZ_CP008943.1 Protein Homology CDS 3741194 3742210 . + 0 ID=cds3254;Parent=gene3343;Dbxref=Genbank:WP_002209964.1;Name=WP_002209964.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3742313 3743476 . + . ID=gene3344;Name=DJ40_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16790;old_locus_tag=DJ40_3315 NZ_CP008943.1 Protein Homology CDS 3742313 3743476 . + 0 ID=cds3255;Parent=gene3344;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3743596 3744675 . + . ID=gene3345;Name=DJ40_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16795;old_locus_tag=DJ40_3316 NZ_CP008943.1 Protein Homology CDS 3743596 3744675 . + 0 ID=cds3256;Parent=gene3345;Dbxref=Genbank:WP_002209962.1;Name=WP_002209962.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3744721 3744886 . + . ID=id277;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3745115 3745984 . + . ID=gene3346;Name=DJ40_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16800;old_locus_tag=DJ40_3317 NZ_CP008943.1 Protein Homology CDS 3745115 3745984 . + 0 ID=cds3257;Parent=gene3346;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3746246 3746863 . + . ID=gene3347;Name=DJ40_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16805;old_locus_tag=DJ40_3318 NZ_CP008943.1 Protein Homology CDS 3746246 3746863 . + 0 ID=cds3258;Parent=gene3347;Dbxref=Genbank:WP_038401037.1;Name=WP_038401037.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein;protein_id=WP_038401037.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3747053 3747832 . + . ID=gene3348;Name=DJ40_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16810;old_locus_tag=DJ40_3319 NZ_CP008943.1 Protein Homology CDS 3747053 3747832 . + 0 ID=cds3259;Parent=gene3348;Dbxref=Genbank:WP_011192966.1;Name=WP_011192966.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3747843 3748751 . - . ID=gene3349;Name=DJ40_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16815;old_locus_tag=DJ40_3320 NZ_CP008943.1 Protein Homology CDS 3747843 3748751 . - 0 ID=cds3260;Parent=gene3349;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3749093 3749749 . + . ID=gene3350;Name=DJ40_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16820;old_locus_tag=DJ40_3321 NZ_CP008943.1 Protein Homology CDS 3749093 3749749 . + 0 ID=cds3261;Parent=gene3350;Dbxref=Genbank:WP_038401039.1;Name=WP_038401039.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_038401039.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3750056 3751297 . + . ID=gene3351;Name=DJ40_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16825;old_locus_tag=DJ40_3322 NZ_CP008943.1 Protein Homology CDS 3750056 3751297 . + 0 ID=cds3262;Parent=gene3351;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3751340 3751510 . + . ID=id278;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3751562 3752158 . - . ID=gene3352;Name=DJ40_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16830;old_locus_tag=DJ40_3323 NZ_CP008943.1 Protein Homology CDS 3751562 3752158 . - 0 ID=cds3263;Parent=gene3352;Dbxref=Genbank:WP_038401042.1;Name=WP_038401042.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_038401042.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3752504 3752833 . - . ID=gene3353;Name=DJ40_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16835;old_locus_tag=DJ40_3324 NZ_CP008943.1 Protein Homology CDS 3752504 3752833 . - 0 ID=cds3264;Parent=gene3353;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3753170 3753748 . + . ID=gene3354;Name=DJ40_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16840;old_locus_tag=DJ40_3325 NZ_CP008943.1 Protein Homology CDS 3753170 3753748 . + 0 ID=cds3265;Parent=gene3354;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3753836 3755149 . + . ID=gene3355;Name=DJ40_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16845;old_locus_tag=DJ40_3326 NZ_CP008943.1 Protein Homology CDS 3753836 3755149 . + 0 ID=cds3266;Parent=gene3355;Dbxref=Genbank:WP_011192964.1;Name=WP_011192964.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_011192964.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3755201 3756379 . + . ID=gene3356;Name=DJ40_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16850;old_locus_tag=DJ40_3327 NZ_CP008943.1 Protein Homology CDS 3755201 3756379 . + 0 ID=cds3267;Parent=gene3356;Dbxref=Genbank:WP_011192963.1;Name=WP_011192963.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_011192963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3756552 3757772 . + . ID=gene3357;Name=DJ40_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16855;old_locus_tag=DJ40_3328 NZ_CP008943.1 Protein Homology CDS 3756552 3757772 . + 0 ID=cds3268;Parent=gene3357;Dbxref=Genbank:WP_002209950.1;Name=WP_002209950.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209950.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3758493 3759590 . + . ID=gene3358;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=DJ40_RS16860;old_locus_tag=DJ40_3329 NZ_CP008943.1 Protein Homology CDS 3758493 3759590 . + 0 ID=cds3269;Parent=gene3358;Dbxref=Genbank:WP_038401043.1;Name=WP_038401043.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_038401043.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3759659 3760045 . + . ID=gene3359;Name=DJ40_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16865;old_locus_tag=DJ40_3330 NZ_CP008943.1 Protein Homology CDS 3759659 3760045 . + 0 ID=cds3270;Parent=gene3359;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3760257 3763136 . + . ID=gene3360;Name=DJ40_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16870;old_locus_tag=DJ40_3331 NZ_CP008943.1 Protein Homology CDS 3760257 3763136 . + 0 ID=cds3271;Parent=gene3360;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3763171 3763343 . + . ID=id279;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3763514 3763951 . + . ID=gene3361;Name=DJ40_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16875;old_locus_tag=DJ40_3332 NZ_CP008943.1 Protein Homology CDS 3763514 3763951 . + 0 ID=cds3272;Parent=gene3361;Dbxref=Genbank:WP_011192961.1;Name=WP_011192961.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192961.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3765011 3765167 . + . ID=gene3362;Name=DJ40_RS16880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS16880;pseudo=true NZ_CP008943.1 Protein Homology CDS 3765011 3765167 . + 0 ID=cds3273;Parent=gene3362;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemagglutinin;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3765164 3767161 . + . ID=gene3363;Name=DJ40_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16885;old_locus_tag=DJ40_3333 NZ_CP008943.1 Protein Homology CDS 3765164 3767161 . + 0 ID=cds3274;Parent=gene3363;Dbxref=Genbank:WP_038401045.1;Name=WP_038401045.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401045.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3767265 3768368 . + . ID=gene3364;Name=DJ40_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16890;old_locus_tag=DJ40_3334 NZ_CP008943.1 Protein Homology CDS 3767265 3768368 . + 0 ID=cds3275;Parent=gene3364;Dbxref=Genbank:WP_011192960.1;Name=WP_011192960.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192960.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3768569 3769270 . + . ID=gene3365;Name=DJ40_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16895;old_locus_tag=DJ40_3335 NZ_CP008943.1 Protein Homology CDS 3768569 3769270 . + 0 ID=cds3276;Parent=gene3365;Dbxref=Genbank:WP_011192959.1;Name=WP_011192959.1;gbkey=CDS;product=hemolysin;protein_id=WP_011192959.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3769545 3770042 . + . ID=gene3366;Name=DJ40_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16900;old_locus_tag=DJ40_3336 NZ_CP008943.1 Protein Homology CDS 3769545 3770042 . + 0 ID=cds3277;Parent=gene3366;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3770115 3771107 . - . ID=gene3367;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=DJ40_RS16905;old_locus_tag=DJ40_3337 NZ_CP008943.1 Protein Homology CDS 3770115 3771107 . - 0 ID=cds3278;Parent=gene3367;Dbxref=Genbank:WP_011192958.1;Name=WP_011192958.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_011192958.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3771424 3771690 . + . ID=gene3368;Name=DJ40_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16910;old_locus_tag=DJ40_3338 NZ_CP008943.1 Protein Homology CDS 3771424 3771690 . + 0 ID=cds3279;Parent=gene3368;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3771671 3772096 . + . ID=gene3369;Name=DJ40_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16915 NZ_CP008943.1 Protein Homology CDS 3771671 3772096 . + 0 ID=cds3280;Parent=gene3369;Dbxref=Genbank:WP_002215144.1;Name=WP_002215144.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3772096 3772794 . + . ID=gene3370;Name=DJ40_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16920;old_locus_tag=DJ40_3339 NZ_CP008943.1 Protein Homology CDS 3772096 3772794 . + 0 ID=cds3281;Parent=gene3370;Dbxref=Genbank:WP_002209937.1;Name=WP_002209937.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209937.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3772805 3774223 . + . ID=gene3371;Name=DJ40_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16925;old_locus_tag=DJ40_3340 NZ_CP008943.1 Protein Homology CDS 3772805 3774223 . + 0 ID=cds3282;Parent=gene3371;Dbxref=Genbank:WP_002209936.1;Name=WP_002209936.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002209936.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3774344 3775801 . + . ID=gene3372;Name=DJ40_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16930;old_locus_tag=DJ40_3341 NZ_CP008943.1 Protein Homology CDS 3774344 3775801 . + 0 ID=cds3283;Parent=gene3372;Dbxref=Genbank:WP_032466588.1;Name=WP_032466588.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466588.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3775886 3776404 . - . ID=gene3373;Name=DJ40_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16935;old_locus_tag=DJ40_3342 NZ_CP008943.1 Protein Homology CDS 3775886 3776404 . - 0 ID=cds3284;Parent=gene3373;Dbxref=Genbank:WP_011192956.1;Name=WP_011192956.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_011192956.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3776511 3777410 . + . ID=gene3374;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=DJ40_RS16940;old_locus_tag=DJ40_3343 NZ_CP008943.1 Protein Homology CDS 3776511 3777410 . + 0 ID=cds3285;Parent=gene3374;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3777441 3778157 . + . ID=gene3375;Name=DJ40_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16945;old_locus_tag=DJ40_3344 NZ_CP008943.1 Protein Homology CDS 3777441 3778157 . + 0 ID=cds3286;Parent=gene3375;Dbxref=Genbank:WP_002209932.1;Name=WP_002209932.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_002209932.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3778164 3779897 . + . ID=gene3376;Name=DJ40_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16950;old_locus_tag=DJ40_3345 NZ_CP008943.1 Protein Homology CDS 3778164 3779897 . + 0 ID=cds3287;Parent=gene3376;Dbxref=Genbank:WP_002209931.1;Name=WP_002209931.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3780242 3781174 . + . ID=gene3377;Name=DJ40_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16955;old_locus_tag=DJ40_3346 NZ_CP008943.1 Protein Homology CDS 3780242 3781174 . + 0 ID=cds3288;Parent=gene3377;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3781184 3782701 . + . ID=gene3378;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=DJ40_RS16960;old_locus_tag=DJ40_3347 NZ_CP008943.1 Protein Homology CDS 3781184 3782701 . + 0 ID=cds3289;Parent=gene3378;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3782895 3782968 . + . ID=gene3379;Name=DJ40_RS16965;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS16965;old_locus_tag=DJ40_3348 NZ_CP008943.1 tRNAscan-SE tRNA 3782895 3782968 . + . ID=rna80;Parent=gene3379;anticodon=(pos:3782927..3782929);gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 tRNAscan-SE exon 3782895 3782968 . + . ID=id280;Parent=rna80;anticodon=(pos:3782927..3782929);gbkey=tRNA;product=tRNA-Gly NZ_CP008943.1 RefSeq gene 3783134 3784348 . + . ID=gene3380;Name=DJ40_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16970;old_locus_tag=DJ40_3349 NZ_CP008943.1 Protein Homology CDS 3783134 3784348 . + 0 ID=cds3290;Parent=gene3380;Dbxref=Genbank:WP_011192954.1;Name=WP_011192954.1;gbkey=CDS;product=integrase;protein_id=WP_011192954.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3784430 3784615 . - . ID=gene3381;Name=DJ40_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16975;old_locus_tag=DJ40_3350 NZ_CP008943.1 Protein Homology CDS 3784430 3784615 . - 0 ID=cds3291;Parent=gene3381;Dbxref=Genbank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3784716 3784841 . - . ID=gene3382;Name=DJ40_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16980 NZ_CP008943.1 Protein Homology CDS 3784716 3784841 . - 0 ID=cds3292;Parent=gene3382;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3785213 3785473 . + . ID=gene3383;Name=DJ40_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16985;old_locus_tag=DJ40_3351 NZ_CP008943.1 Protein Homology CDS 3785213 3785473 . + 0 ID=cds3293;Parent=gene3383;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3785536 3785898 . + . ID=gene3384;Name=DJ40_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16990;old_locus_tag=DJ40_3352 NZ_CP008943.1 Protein Homology CDS 3785536 3785898 . + 0 ID=cds3294;Parent=gene3384;Dbxref=Genbank:WP_011192920.1;Name=WP_011192920.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_011192920.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3786062 3786358 . + . ID=gene3385;Name=DJ40_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS16995;old_locus_tag=DJ40_3353 NZ_CP008943.1 Protein Homology CDS 3786062 3786358 . + 0 ID=cds3295;Parent=gene3385;Dbxref=Genbank:WP_024063131.1;Name=WP_024063131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063131.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3786358 3786756 . + . ID=gene3386;Name=DJ40_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17000;old_locus_tag=DJ40_3354 NZ_CP008943.1 Protein Homology CDS 3786358 3786756 . + 0 ID=cds3296;Parent=gene3386;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3787156 3789447 . - . ID=gene3387;Name=DJ40_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17005;old_locus_tag=DJ40_3355 NZ_CP008943.1 Protein Homology CDS 3787156 3789447 . - 0 ID=cds3297;Parent=gene3387;Dbxref=Genbank:WP_038401050.1;Name=WP_038401050.1;gbkey=CDS;product=DNA primase;protein_id=WP_038401050.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3789747 3790073 . + . ID=gene3388;Name=DJ40_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17010;old_locus_tag=DJ40_3356 NZ_CP008943.1 Protein Homology CDS 3789747 3790073 . + 0 ID=cds3298;Parent=gene3388;Dbxref=Genbank:WP_002209922.1;Name=WP_002209922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209922.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3790066 3790218 . + . ID=gene3389;Name=DJ40_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17015 NZ_CP008943.1 Protein Homology CDS 3790066 3790218 . + 0 ID=cds3299;Parent=gene3389;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3790232 3790432 . - . ID=gene3390;Name=DJ40_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17020;old_locus_tag=DJ40_3357 NZ_CP008943.1 Protein Homology CDS 3790232 3790432 . - 0 ID=cds3300;Parent=gene3390;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3790614 3790946 . - . ID=gene3391;Name=DJ40_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17025 NZ_CP008943.1 Protein Homology CDS 3790614 3790946 . - 0 ID=cds3301;Parent=gene3391;Dbxref=Genbank:WP_032466587.1;Name=WP_032466587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466587.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3791061 3791294 . - . ID=gene3392;Name=DJ40_RS17030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS17030;partial=true;pseudo=true;start_range=.,3791061 NZ_CP008943.1 Protein Homology CDS 3791061 3791294 . - 0 ID=cds3302;Parent=gene3392;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3791061;transl_table=11 NZ_CP008943.1 RefSeq gene 3791307 3791672 . - . ID=gene3393;Name=DJ40_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17035;old_locus_tag=DJ40_3359 NZ_CP008943.1 Protein Homology CDS 3791307 3791672 . - 0 ID=cds3303;Parent=gene3393;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3791941 3793083 . + . ID=gene3394;Name=DJ40_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17040;old_locus_tag=DJ40_3360 NZ_CP008943.1 Protein Homology CDS 3791941 3793083 . + 0 ID=cds3304;Parent=gene3394;Dbxref=Genbank:WP_032465900.1;Name=WP_032465900.1;gbkey=CDS;product=Fic family protein;protein_id=WP_032465900.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3793590 3795128 . + . ID=gene3395;Name=DJ40_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17045;old_locus_tag=DJ40_3361 NZ_CP008943.1 Protein Homology CDS 3793590 3795128 . + 0 ID=cds3305;Parent=gene3395;Dbxref=Genbank:WP_032465899.1;Name=WP_032465899.1;gbkey=CDS;product=S-type Pyocin family protein;protein_id=WP_032465899.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3795125 3795319 . + . ID=gene3396;Name=DJ40_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17050;old_locus_tag=DJ40_3362 NZ_CP008943.1 Protein Homology CDS 3795125 3795319 . + 0 ID=cds3306;Parent=gene3396;Dbxref=Genbank:WP_024063134.1;Name=WP_024063134.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063134.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3795692 3795895 . + . ID=gene3397;Name=DJ40_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17055;old_locus_tag=DJ40_3363 NZ_CP008943.1 Protein Homology CDS 3795692 3795895 . + 0 ID=cds3307;Parent=gene3397;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3795695 3795905 . + . ID=id281;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3795942 3796226 . + . ID=gene3398;Name=DJ40_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17060;old_locus_tag=DJ40_3364 NZ_CP008943.1 Protein Homology CDS 3795942 3796226 . + 0 ID=cds3308;Parent=gene3398;Dbxref=Genbank:WP_011192913.1;Name=WP_011192913.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_011192913.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3796036 3796399 . + . ID=id282;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3796636 3798795 . + . ID=gene3399;Name=DJ40_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17065;old_locus_tag=DJ40_3365 NZ_CP008943.1 Protein Homology CDS 3796636 3798795 . + 0 ID=cds3309;Parent=gene3399;Dbxref=Genbank:WP_012303725.1;Name=WP_012303725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303725.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3798765 3799532 . + . ID=gene3400;Name=DJ40_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17070;old_locus_tag=DJ40_3366 NZ_CP008943.1 Protein Homology CDS 3798765 3799532 . + 0 ID=cds3310;Parent=gene3400;Dbxref=Genbank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209913.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3799844 3800056 . + . ID=gene3401;Name=DJ40_RS17075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS17075;pseudo=true NZ_CP008943.1 Protein Homology CDS 3799844 3800056 . + 0 ID=cds3311;Parent=gene3401;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3799934..3799936%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 3800137 3800916 . + . ID=gene3402;Name=DJ40_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17080;old_locus_tag=DJ40_3367 NZ_CP008943.1 Protein Homology CDS 3800137 3800916 . + 0 ID=cds3312;Parent=gene3402;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3801172 3801438 . + . ID=gene3403;Name=DJ40_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17085;old_locus_tag=DJ40_3368 NZ_CP008943.1 Protein Homology CDS 3801172 3801438 . + 0 ID=cds3313;Parent=gene3403;Dbxref=Genbank:WP_012303726.1;Name=WP_012303726.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303726.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3801537 3801857 . - . ID=gene3404;Name=DJ40_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17090;old_locus_tag=DJ40_3369 NZ_CP008943.1 Protein Homology CDS 3801537 3801857 . - 0 ID=cds3314;Parent=gene3404;Dbxref=Genbank:WP_011192910.1;Name=WP_011192910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192910.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3801857 3802537 . - . ID=gene3405;Name=DJ40_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17095;old_locus_tag=DJ40_3370 NZ_CP008943.1 Protein Homology CDS 3801857 3802537 . - 0 ID=cds3315;Parent=gene3405;Dbxref=Genbank:WP_011192909.1;Name=WP_011192909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_011192909.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3802981 3803838 . - . ID=gene3406;Name=DJ40_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17100;old_locus_tag=DJ40_3371 NZ_CP008943.1 Protein Homology CDS 3802981 3803838 . - 0 ID=cds3316;Parent=gene3406;Dbxref=Genbank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209908.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3804214 3804732 . - . ID=gene3407;Name=DJ40_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17105;old_locus_tag=DJ40_3372 NZ_CP008943.1 Protein Homology CDS 3804214 3804732 . - 0 ID=cds3317;Parent=gene3407;Dbxref=Genbank:WP_038401053.1;Name=WP_038401053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401053.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3805511 3806512 . - . ID=gene3408;Name=DJ40_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17110;old_locus_tag=DJ40_3373 NZ_CP008943.1 Protein Homology CDS 3805511 3806512 . - 0 ID=cds3318;Parent=gene3408;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3806946 3807950 . - . ID=gene3409;Name=DJ40_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17115;old_locus_tag=DJ40_3374 NZ_CP008943.1 Protein Homology CDS 3806946 3807950 . - 0 ID=cds3319;Parent=gene3409;Dbxref=Genbank:WP_002209904.1;Name=WP_002209904.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209904.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3808020 3809528 . - . ID=gene3410;Name=DJ40_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17120;old_locus_tag=DJ40_3375 NZ_CP008943.1 Protein Homology CDS 3808020 3809528 . - 0 ID=cds3320;Parent=gene3410;Dbxref=Genbank:WP_032465984.1;Name=WP_032465984.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=D-ribose transporter ATP-binding protein;protein_id=WP_032465984.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3810067 3811179 . - . ID=gene3411;Name=DJ40_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17125;old_locus_tag=DJ40_3376 NZ_CP008943.1 Protein Homology CDS 3810067 3811179 . - 0 ID=cds3321;Parent=gene3411;Dbxref=Genbank:WP_038401055.1;Name=WP_038401055.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038401055.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3811542 3812777 . + . ID=gene3412;Name=DJ40_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17130;old_locus_tag=DJ40_3377 NZ_CP008943.1 Protein Homology CDS 3811542 3812777 . + 0 ID=cds3322;Parent=gene3412;Dbxref=Genbank:WP_038401056.1;Name=WP_038401056.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_038401056.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3812937 3814244 . + . ID=gene3413;Name=DJ40_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17135;old_locus_tag=DJ40_3378 NZ_CP008943.1 Protein Homology CDS 3812937 3814244 . + 0 ID=cds3323;Parent=gene3413;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3814256 3815107 . + . ID=gene3414;Name=DJ40_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17140;old_locus_tag=DJ40_3379 NZ_CP008943.1 Protein Homology CDS 3814256 3815107 . + 0 ID=cds3324;Parent=gene3414;Dbxref=Genbank:WP_002209899.1;Name=WP_002209899.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3815112 3816314 . + . ID=gene3415;Name=DJ40_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17145;old_locus_tag=DJ40_3380 NZ_CP008943.1 Protein Homology CDS 3815112 3816314 . + 0 ID=cds3325;Parent=gene3415;Dbxref=Genbank:WP_038401058.1;Name=WP_038401058.1;gbkey=CDS;product=galactosidase;protein_id=WP_038401058.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3816365 3818425 . + . ID=gene3416;Name=DJ40_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17150;old_locus_tag=DJ40_3381 NZ_CP008943.1 Protein Homology CDS 3816365 3818425 . + 0 ID=cds3326;Parent=gene3416;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3818537 3818848 . + . ID=gene3417;Name=DJ40_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17155;old_locus_tag=DJ40_3382 NZ_CP008943.1 Protein Homology CDS 3818537 3818848 . + 0 ID=cds3327;Parent=gene3417;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3819221 3820480 . - . ID=gene3418;Name=DJ40_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17160;old_locus_tag=DJ40_3383 NZ_CP008943.1 Protein Homology CDS 3819221 3820480 . - 0 ID=cds3328;Parent=gene3418;Dbxref=Genbank:WP_011192907.1;Name=WP_011192907.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_011192907.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3820752 3821825 . + . ID=gene3419;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=DJ40_RS17165;old_locus_tag=DJ40_3384 NZ_CP008943.1 Protein Homology CDS 3820752 3821825 . + 0 ID=cds3329;Parent=gene3419;Dbxref=Genbank:WP_002209894.1;Name=WP_002209894.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_002209894.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3821897 3822618 . + . ID=id283;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3822007 3822465 . - . ID=gene3420;Name=DJ40_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17170;old_locus_tag=DJ40_3385 NZ_CP008943.1 Protein Homology CDS 3822007 3822465 . - 0 ID=cds3330;Parent=gene3420;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3822455 3822625 . - . ID=gene3421;Name=DJ40_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17175 NZ_CP008943.1 Protein Homology CDS 3822455 3822625 . - 0 ID=cds3331;Parent=gene3421;Dbxref=Genbank:WP_002215763.1;Name=WP_002215763.1;gbkey=CDS;product=invasin;protein_id=WP_002215763.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3822659 3825034 . - . ID=gene3422;Name=DJ40_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17180;old_locus_tag=DJ40_3386 NZ_CP008943.1 Protein Homology CDS 3822659 3825034 . - 0 ID=cds3332;Parent=gene3422;Dbxref=Genbank:WP_038401059.1;Name=WP_038401059.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_038401059.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3825183 3826490 . - . ID=gene3423;Name=DJ40_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17185;old_locus_tag=DJ40_3387 NZ_CP008943.1 Protein Homology CDS 3825183 3826490 . - 0 ID=cds3333;Parent=gene3423;Dbxref=Genbank:WP_011192905.1;Name=WP_011192905.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_011192905.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3826884 3827966 . + . ID=gene3424;Name=DJ40_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17190;old_locus_tag=DJ40_3388 NZ_CP008943.1 Protein Homology CDS 3826884 3827966 . + 0 ID=cds3334;Parent=gene3424;Dbxref=Genbank:WP_002209890.1;Name=WP_002209890.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209890.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3827956 3828237 . + . ID=gene3425;Name=DJ40_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17195;old_locus_tag=DJ40_3390 NZ_CP008943.1 Protein Homology CDS 3827956 3828237 . + 0 ID=cds3335;Parent=gene3425;Dbxref=Genbank:WP_032465982.1;Name=WP_032465982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032465982.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3828207 3828785 . - . ID=gene3426;Name=DJ40_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17200;old_locus_tag=DJ40_3389 NZ_CP008943.1 Protein Homology CDS 3828207 3828785 . - 0 ID=cds3336;Parent=gene3426;Dbxref=Genbank:WP_011192903.1;Name=WP_011192903.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_011192903.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3828809 3829663 . - . ID=gene3427;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=DJ40_RS17205;old_locus_tag=DJ40_3391 NZ_CP008943.1 Protein Homology CDS 3828809 3829663 . - 0 ID=cds3337;Parent=gene3427;Dbxref=Genbank:WP_011192902.1;Name=WP_011192902.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_011192902.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3829774 3831261 . - . ID=gene3428;Name=DJ40_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17210;old_locus_tag=DJ40_3392 NZ_CP008943.1 Protein Homology CDS 3829774 3831261 . - 0 ID=cds3338;Parent=gene3428;Dbxref=Genbank:WP_012104701.1;Name=WP_012104701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104701.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3831384 3832991 . - . ID=gene3429;Name=DJ40_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17215;old_locus_tag=DJ40_3393 NZ_CP008943.1 Protein Homology CDS 3831384 3832991 . - 0 ID=cds3339;Parent=gene3429;Dbxref=Genbank:WP_032465978.1;Name=WP_032465978.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_032465978.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3833012 3834238 . - . ID=gene3430;Name=DJ40_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17220;old_locus_tag=DJ40_3394 NZ_CP008943.1 Protein Homology CDS 3833012 3834238 . - 0 ID=cds3340;Parent=gene3430;Dbxref=Genbank:WP_011192899.1;Name=WP_011192899.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_011192899.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3834409 3834580 . + . ID=id284;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3834669 3835727 . - . ID=gene3431;Name=DJ40_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17225;old_locus_tag=DJ40_3395 NZ_CP008943.1 Protein Homology CDS 3834669 3835727 . - 0 ID=cds3341;Parent=gene3431;Dbxref=Genbank:WP_012104703.1;Name=WP_012104703.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_012104703.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3835743 3836498 . - . ID=gene3432;Name=DJ40_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17230;old_locus_tag=DJ40_3396 NZ_CP008943.1 Protein Homology CDS 3835743 3836498 . - 0 ID=cds3342;Parent=gene3432;Dbxref=Genbank:WP_002230627.1;Name=WP_002230627.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002230627.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3836694 3837860 . - . ID=gene3433;Name=DJ40_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17235;old_locus_tag=DJ40_3397 NZ_CP008943.1 Protein Homology CDS 3836694 3837860 . - 0 ID=cds3343;Parent=gene3433;Dbxref=Genbank:WP_002209882.1;Name=WP_002209882.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002209882.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3837863 3838303 . - . ID=gene3434;Name=DJ40_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17240;old_locus_tag=DJ40_3398 NZ_CP008943.1 Protein Homology CDS 3837863 3838303 . - 0 ID=cds3344;Parent=gene3434;Dbxref=Genbank:WP_012104706.1;Name=WP_012104706.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_012104706.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3838389 3839279 . - . ID=gene3435;Name=DJ40_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17245;old_locus_tag=DJ40_3399 NZ_CP008943.1 Protein Homology CDS 3838389 3839279 . - 0 ID=cds3345;Parent=gene3435;Dbxref=Genbank:WP_002209880.1;Name=WP_002209880.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3839269 3840057 . - . ID=gene3436;Name=DJ40_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17250;old_locus_tag=DJ40_3400 NZ_CP008943.1 Protein Homology CDS 3839269 3840057 . - 0 ID=cds3346;Parent=gene3436;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3840104 3840601 . - . ID=gene3437;Name=DJ40_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17255;old_locus_tag=DJ40_3401 NZ_CP008943.1 Protein Homology CDS 3840104 3840601 . - 0 ID=cds3347;Parent=gene3437;Dbxref=Genbank:WP_002209878.1;Name=WP_002209878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3840619 3841785 . - . ID=gene3438;Name=DJ40_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17260;old_locus_tag=DJ40_3402 NZ_CP008943.1 Protein Homology CDS 3840619 3841785 . - 0 ID=cds3348;Parent=gene3438;Dbxref=Genbank:WP_011192898.1;Name=WP_011192898.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_011192898.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3841782 3843080 . - . ID=gene3439;Name=DJ40_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17265;old_locus_tag=DJ40_3403 NZ_CP008943.1 Protein Homology CDS 3841782 3843080 . - 0 ID=cds3349;Parent=gene3439;Dbxref=Genbank:WP_012413879.1;Name=WP_012413879.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose-bisphosphate aldolase;protein_id=WP_012413879.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3843130 3843906 . - . ID=gene3440;Name=DJ40_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17270;old_locus_tag=DJ40_3404 NZ_CP008943.1 Protein Homology CDS 3843130 3843906 . - 0 ID=cds3350;Parent=gene3440;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3844746 3846299 . + . ID=gene3441;Name=DJ40_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17275;old_locus_tag=DJ40_3405 NZ_CP008943.1 Protein Homology CDS 3844746 3846299 . + 0 ID=cds3351;Parent=gene3441;Dbxref=Genbank:WP_002209873.1;Name=WP_002209873.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209873.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3846481 3846667 . + . ID=id285;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3846719 3849832 . - . ID=gene3442;Name=DJ40_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17280;old_locus_tag=DJ40_3406 NZ_CP008943.1 Protein Homology CDS 3846719 3849832 . - 0 ID=cds3352;Parent=gene3442;Dbxref=Genbank:WP_038401062.1;Name=WP_038401062.1;gbkey=CDS;product=chondroitin lyase;protein_id=WP_038401062.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3849902 3852088 . - . ID=gene3443;Name=DJ40_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17285;old_locus_tag=DJ40_3407 NZ_CP008943.1 Protein Homology CDS 3849902 3852088 . - 0 ID=cds3353;Parent=gene3443;Dbxref=Genbank:WP_038401064.1;Name=WP_038401064.1;gbkey=CDS;product=autotransporter;protein_id=WP_038401064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3852203 3853153 . - . ID=gene3444;Name=DJ40_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17290;old_locus_tag=DJ40_3408 NZ_CP008943.1 Protein Homology CDS 3852203 3853153 . - 0 ID=cds3354;Parent=gene3444;Dbxref=Genbank:WP_038401067.1;Name=WP_038401067.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401067.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3853175 3853369 . - . ID=gene3445;Name=DJ40_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17295 NZ_CP008943.1 Protein Homology CDS 3853175 3853369 . - 0 ID=cds3355;Parent=gene3445;Dbxref=Genbank:WP_038401070.1;Name=WP_038401070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401070.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3853756 3853944 . - . ID=gene3446;Name=DJ40_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17300;old_locus_tag=DJ40_3409 NZ_CP008943.1 Protein Homology CDS 3853756 3853944 . - 0 ID=cds3356;Parent=gene3446;Dbxref=Genbank:WP_012104711.1;Name=WP_012104711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104711.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3854438 3855193 . + . ID=gene3447;Name=DJ40_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17305;old_locus_tag=DJ40_3410 NZ_CP008943.1 Protein Homology CDS 3854438 3855193 . + 0 ID=cds3357;Parent=gene3447;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3855936 3856352 . + . ID=gene3448;Name=DJ40_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17310;old_locus_tag=DJ40_3411 NZ_CP008943.1 Protein Homology CDS 3855936 3856352 . + 0 ID=cds3358;Parent=gene3448;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3856524 3856925 . + . ID=gene3449;Name=DJ40_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17315 NZ_CP008943.1 Protein Homology CDS 3856524 3856925 . + 0 ID=cds3359;Parent=gene3449;Dbxref=Genbank:WP_002209865.1;Name=WP_002209865.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_002209865.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3857006 3858928 . + . ID=gene3450;Name=DJ40_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17320;old_locus_tag=DJ40_3413 NZ_CP008943.1 Protein Homology CDS 3857006 3858928 . + 0 ID=cds3360;Parent=gene3450;Dbxref=Genbank:WP_011192891.1;Name=WP_011192891.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_011192891.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3858925 3860436 . + . ID=gene3451;Name=DJ40_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17325;old_locus_tag=DJ40_3414 NZ_CP008943.1 Protein Homology CDS 3858925 3860436 . + 0 ID=cds3361;Parent=gene3451;Dbxref=Genbank:WP_002209863.1;Name=WP_002209863.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_002209863.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3860579 3861625 . + . ID=gene3452;Name=DJ40_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17330;old_locus_tag=DJ40_3415 NZ_CP008943.1 Protein Homology CDS 3860579 3861625 . + 0 ID=cds3362;Parent=gene3452;Dbxref=Genbank:WP_038401804.1;Name=WP_038401804.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_038401804.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3861645 3862082 . + . ID=gene3453;Name=DJ40_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17335;old_locus_tag=DJ40_3416 NZ_CP008943.1 Protein Homology CDS 3861645 3862082 . + 0 ID=cds3363;Parent=gene3453;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3862087 3862629 . + . ID=gene3454;Name=DJ40_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17340;old_locus_tag=DJ40_3417 NZ_CP008943.1 Protein Homology CDS 3862087 3862629 . + 0 ID=cds3364;Parent=gene3454;Dbxref=Genbank:WP_011192889.1;Name=WP_011192889.1;gbkey=CDS;product=general secretion pathway protein GspH;protein_id=WP_011192889.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3862721 3863011 . + . ID=gene3455;Name=DJ40_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17345;old_locus_tag=DJ40_3418 NZ_CP008943.1 Protein Homology CDS 3862721 3863011 . + 0 ID=cds3365;Parent=gene3455;Dbxref=Genbank:WP_032465974.1;Name=WP_032465974.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_032465974.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3863004 3863600 . + . ID=gene3456;Name=DJ40_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17350;old_locus_tag=DJ40_3419 NZ_CP008943.1 Protein Homology CDS 3863004 3863600 . + 0 ID=cds3366;Parent=gene3456;Dbxref=Genbank:WP_012104718.1;Name=WP_012104718.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_012104718.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3863609 3864565 . + . ID=gene3457;Name=DJ40_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17355;old_locus_tag=DJ40_3420 NZ_CP008943.1 Protein Homology CDS 3863609 3864565 . + 0 ID=cds3367;Parent=gene3457;Dbxref=Genbank:WP_038401073.1;Name=WP_038401073.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_038401073.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3864549 3865739 . + . ID=gene3458;Name=DJ40_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17360;old_locus_tag=DJ40_3421 NZ_CP008943.1 Protein Homology CDS 3864549 3865739 . + 0 ID=cds3368;Parent=gene3458;Dbxref=Genbank:WP_038401074.1;Name=WP_038401074.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_038401074.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3865748 3866197 . + . ID=gene3459;Name=DJ40_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17365;old_locus_tag=DJ40_3422 NZ_CP008943.1 Protein Homology CDS 3865748 3866197 . + 0 ID=cds3369;Parent=gene3459;Dbxref=Genbank:WP_038401807.1;Name=WP_038401807.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401807.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3866226 3867065 . + . ID=gene3460;Name=DJ40_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17370;old_locus_tag=DJ40_3424 NZ_CP008943.1 Protein Homology CDS 3866226 3867065 . + 0 ID=cds3370;Parent=gene3460;Dbxref=Genbank:WP_002209856.1;Name=WP_002209856.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3867049 3867414 . - . ID=gene3461;Name=DJ40_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17375;old_locus_tag=DJ40_3423 NZ_CP008943.1 Protein Homology CDS 3867049 3867414 . - 0 ID=cds3371;Parent=gene3461;Dbxref=Genbank:WP_002230661.1;Name=WP_002230661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230661.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3867698 3868357 . + . ID=gene3462;Name=DJ40_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17380;old_locus_tag=DJ40_3425 NZ_CP008943.1 Protein Homology CDS 3867698 3868357 . + 0 ID=cds3372;Parent=gene3462;Dbxref=Genbank:WP_011192884.1;Name=WP_011192884.1;gbkey=CDS;product=regulatory membrane protein;protein_id=WP_011192884.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3868411 3868812 . + . ID=gene3463;Name=DJ40_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17385;old_locus_tag=DJ40_3426 NZ_CP008943.1 Protein Homology CDS 3868411 3868812 . + 0 ID=cds3373;Parent=gene3463;Dbxref=Genbank:WP_002214100.1;Name=WP_002214100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214100.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3868967 3870658 . + . ID=gene3464;Name=DJ40_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17390;old_locus_tag=DJ40_3428 NZ_CP008943.1 Protein Homology CDS 3868967 3870658 . + 0 ID=cds3374;Parent=gene3464;Dbxref=Genbank:WP_012413875.1;Name=WP_012413875.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_012413875.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3870644 3871279 . - . ID=gene3465;Name=DJ40_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17395;old_locus_tag=DJ40_3427 NZ_CP008943.1 Protein Homology CDS 3870644 3871279 . - 0 ID=cds3375;Parent=gene3465;Dbxref=Genbank:WP_011192881.1;Name=WP_011192881.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_011192881.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3871392 3872279 . - . ID=gene3466;Name=DJ40_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17400;old_locus_tag=DJ40_3429 NZ_CP008943.1 Protein Homology CDS 3871392 3872279 . - 0 ID=cds3376;Parent=gene3466;Dbxref=Genbank:WP_012104727.1;Name=WP_012104727.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_012104727.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3872386 3873294 . + . ID=gene3467;Name=DJ40_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17405;old_locus_tag=DJ40_3430 NZ_CP008943.1 Protein Homology CDS 3872386 3873294 . + 0 ID=cds3377;Parent=gene3467;Dbxref=Genbank:WP_002209849.1;Name=WP_002209849.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3873663 3874823 . + . ID=gene3468;Name=DJ40_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17410;old_locus_tag=DJ40_3432 NZ_CP008943.1 Protein Homology CDS 3873663 3874823 . + 0 ID=cds3378;Parent=gene3468;Dbxref=Genbank:WP_002209848.1;Name=WP_002209848.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3874820 3875761 . - . ID=gene3469;Name=DJ40_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17415;old_locus_tag=DJ40_3431 NZ_CP008943.1 Protein Homology CDS 3874820 3875761 . - 0 ID=cds3379;Parent=gene3469;Dbxref=Genbank:WP_038401076.1;Name=WP_038401076.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038401076.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3875977 3877239 . + . ID=gene3470;Name=DJ40_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17420;old_locus_tag=DJ40_3434 NZ_CP008943.1 Protein Homology CDS 3875977 3877239 . + 0 ID=cds3380;Parent=gene3470;Dbxref=Genbank:WP_012303749.1;Name=WP_012303749.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_012303749.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3877236 3878258 . - . ID=gene3471;Name=DJ40_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17425;old_locus_tag=DJ40_3433 NZ_CP008943.1 Protein Homology CDS 3877236 3878258 . - 0 ID=cds3381;Parent=gene3471;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3878568 3880829 . + . ID=gene3472;Name=DJ40_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17430;old_locus_tag=DJ40_3435 NZ_CP008943.1 Protein Homology CDS 3878568 3880829 . + 0 ID=cds3382;Parent=gene3472;Dbxref=Genbank:WP_011192877.1;Name=WP_011192877.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_011192877.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3881277 3883433 . + . ID=gene3473;Name=DJ40_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17435;old_locus_tag=DJ40_3436 NZ_CP008943.1 Protein Homology CDS 3881277 3883433 . + 0 ID=cds3383;Parent=gene3473;Dbxref=Genbank:WP_038401078.1;Name=WP_038401078.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=acyl-ACP synthetase;protein_id=WP_038401078.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3883430 3884650 . + . ID=gene3474;Name=DJ40_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17440;old_locus_tag=DJ40_3437 NZ_CP008943.1 Protein Homology CDS 3883430 3884650 . + 0 ID=cds3384;Parent=gene3474;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3884679 3884912 . - . ID=gene3475;Name=DJ40_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17445 NZ_CP008943.1 Protein Homology CDS 3884679 3884912 . - 0 ID=cds3385;Parent=gene3475;Dbxref=Genbank:WP_038401080.1;Name=WP_038401080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401080.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3884991 3885242 . + . ID=gene3476;Name=DJ40_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17450;old_locus_tag=DJ40_3439 NZ_CP008943.1 Protein Homology CDS 3884991 3885242 . + 0 ID=cds3386;Parent=gene3476;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3885395 3885563 . + . ID=id286;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3885619 3886659 . - . ID=gene3477;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=DJ40_RS17455;old_locus_tag=DJ40_3440 NZ_CP008943.1 Protein Homology CDS 3885619 3886659 . - 0 ID=cds3387;Parent=gene3477;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3887030 3887713 . - . ID=gene3478;Name=DJ40_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17460 NZ_CP008943.1 Protein Homology CDS 3887030 3887713 . - 0 ID=cds3388;Parent=gene3478;Dbxref=Genbank:WP_038401082.1;Name=WP_038401082.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_038401082.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3887950 3888141 . + . ID=gene3479;Name=DJ40_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17465 NZ_CP008943.1 Protein Homology CDS 3887950 3888141 . + 0 ID=cds3389;Parent=gene3479;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3888116 3888388 . + . ID=gene3480;Name=DJ40_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17470 NZ_CP008943.1 Protein Homology CDS 3888116 3888388 . + 0 ID=cds3390;Parent=gene3480;Dbxref=Genbank:WP_038401084.1;Name=WP_038401084.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401084.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3888414 3888941 . + . ID=gene3481;Name=DJ40_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17475;old_locus_tag=DJ40_3442 NZ_CP008943.1 Protein Homology CDS 3888414 3888941 . + 0 ID=cds3391;Parent=gene3481;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3888954 3891200 . + . ID=gene3482;Name=DJ40_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17480;old_locus_tag=DJ40_3443 NZ_CP008943.1 Protein Homology CDS 3888954 3891200 . + 0 ID=cds3392;Parent=gene3482;Dbxref=Genbank:WP_011192874.1;Name=WP_011192874.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_011192874.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3891451 3892323 . + . ID=gene3483;Name=DJ40_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17485;old_locus_tag=DJ40_3444 NZ_CP008943.1 Protein Homology CDS 3891451 3892323 . + 0 ID=cds3393;Parent=gene3483;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3892330 3893124 . + . ID=gene3484;Name=DJ40_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17490;old_locus_tag=DJ40_3445 NZ_CP008943.1 Protein Homology CDS 3892330 3893124 . + 0 ID=cds3394;Parent=gene3484;Dbxref=Genbank:WP_011192873.1;Name=WP_011192873.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_011192873.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3893166 3893381 . + . ID=gene3485;Name=DJ40_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17495 NZ_CP008943.1 Protein Homology CDS 3893166 3893381 . + 0 ID=cds3395;Parent=gene3485;Dbxref=Genbank:WP_038401087.1;Name=WP_038401087.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401087.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3893368 3893937 . + . ID=gene3486;Name=DJ40_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17500 NZ_CP008943.1 Protein Homology CDS 3893368 3893937 . + 0 ID=cds3396;Parent=gene3486;Dbxref=Genbank:WP_002228638.1;Name=WP_002228638.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002228638.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3893928 3894536 . + . ID=gene3487;Name=DJ40_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17505;old_locus_tag=DJ40_3447 NZ_CP008943.1 Protein Homology CDS 3893928 3894536 . + 0 ID=cds3397;Parent=gene3487;Dbxref=Genbank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002211630.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3894533 3895003 . + . ID=gene3488;Name=DJ40_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17510;old_locus_tag=DJ40_3448 NZ_CP008943.1 Protein Homology CDS 3894533 3895003 . + 0 ID=cds3398;Parent=gene3488;Dbxref=Genbank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211629.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3895036 3895401 . + . ID=gene3489;Name=DJ40_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17515;old_locus_tag=DJ40_3449 NZ_CP008943.1 Protein Homology CDS 3895036 3895401 . + 0 ID=cds3399;Parent=gene3489;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3895536 3898907 . + . ID=gene3490;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=DJ40_RS17520;old_locus_tag=DJ40_3450 NZ_CP008943.1 Protein Homology CDS 3895536 3898907 . + 0 ID=cds3400;Parent=gene3490;Dbxref=Genbank:WP_038401088.1;Name=WP_038401088.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_038401088.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3898989 3901877 . + . ID=gene3491;Name=DJ40_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17525;old_locus_tag=DJ40_3451 NZ_CP008943.1 Protein Homology CDS 3898989 3901877 . + 0 ID=cds3401;Parent=gene3491;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3901874 3905536 . + . ID=gene3492;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=DJ40_RS17530;old_locus_tag=DJ40_3452 NZ_CP008943.1 Protein Homology CDS 3901874 3905536 . + 0 ID=cds3402;Parent=gene3492;Dbxref=Genbank:WP_038401090.1;Name=WP_038401090.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_038401090.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3905533 3907506 . + . ID=gene3493;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=DJ40_RS17535;old_locus_tag=DJ40_3453 NZ_CP008943.1 Protein Homology CDS 3905533 3907506 . + 0 ID=cds3403;Parent=gene3493;Dbxref=Genbank:WP_038401092.1;Name=WP_038401092.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_038401092.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3907661 3908986 . - . ID=gene3494;Name=DJ40_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17540;old_locus_tag=DJ40_3454 NZ_CP008943.1 Protein Homology CDS 3907661 3908986 . - 0 ID=cds3404;Parent=gene3494;Dbxref=Genbank:WP_002211624.1;Name=WP_002211624.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=amino-acid acetyltransferase;protein_id=WP_002211624.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3909222 3910472 . + . ID=gene3495;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=DJ40_RS17545;old_locus_tag=DJ40_3455 NZ_CP008943.1 Protein Homology CDS 3909222 3910472 . + 0 ID=cds3405;Parent=gene3495;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3910702 3910778 . - . ID=gene3496;Name=DJ40_RS17550;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS17550;old_locus_tag=DJ40_3456 NZ_CP008943.1 tRNAscan-SE tRNA 3910702 3910778 . - . ID=rna81;Parent=gene3496;anticodon=(pos:complement(3910742..3910744));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 tRNAscan-SE exon 3910702 3910778 . - . ID=id287;Parent=rna81;anticodon=(pos:complement(3910742..3910744));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 RefSeq gene 3910839 3910915 . - . ID=gene3497;Name=DJ40_RS17555;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS17555;old_locus_tag=DJ40_3457 NZ_CP008943.1 tRNAscan-SE tRNA 3910839 3910915 . - . ID=rna82;Parent=gene3497;anticodon=(pos:complement(3910879..3910881));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 tRNAscan-SE exon 3910839 3910915 . - . ID=id288;Parent=rna82;anticodon=(pos:complement(3910879..3910881));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 RefSeq gene 3911061 3911137 . - . ID=gene3498;Name=DJ40_RS17560;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS17560;old_locus_tag=DJ40_3458 NZ_CP008943.1 tRNAscan-SE tRNA 3911061 3911137 . - . ID=rna83;Parent=gene3498;anticodon=(pos:complement(3911101..3911103));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 tRNAscan-SE exon 3911061 3911137 . - . ID=id289;Parent=rna83;anticodon=(pos:complement(3911101..3911103));gbkey=tRNA;product=tRNA-Met NZ_CP008943.1 RefSeq gene 3911353 3912525 . + . ID=gene3499;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=DJ40_RS17565;old_locus_tag=DJ40_3459 NZ_CP008943.1 Protein Homology CDS 3911353 3912525 . + 0 ID=cds3406;Parent=gene3499;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3912668 3913495 . + . ID=gene3500;Name=DJ40_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17570;old_locus_tag=DJ40_3460 NZ_CP008943.1 Protein Homology CDS 3912668 3913495 . + 0 ID=cds3407;Parent=gene3500;Dbxref=Genbank:WP_002212114.1;Name=WP_002212114.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_002212114.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3913531 3913974 . - . ID=gene3501;Name=DJ40_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17575;old_locus_tag=DJ40_3461 NZ_CP008943.1 Protein Homology CDS 3913531 3913974 . - 0 ID=cds3408;Parent=gene3501;Dbxref=Genbank:WP_032467022.1;Name=WP_032467022.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_032467022.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3914109 3915314 . - . ID=gene3502;Name=DJ40_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17580;old_locus_tag=DJ40_3462 NZ_CP008943.1 Protein Homology CDS 3914109 3915314 . - 0 ID=cds3409;Parent=gene3502;Dbxref=Genbank:WP_038401095.1;Name=WP_038401095.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_038401095.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3915989 3916906 . + . ID=gene3503;Name=DJ40_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17585;old_locus_tag=DJ40_3464 NZ_CP008943.1 Protein Homology CDS 3915989 3916906 . + 0 ID=cds3410;Parent=gene3503;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3917087 3917467 . + . ID=gene3504;Name=DJ40_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17590;old_locus_tag=DJ40_3465 NZ_CP008943.1 Protein Homology CDS 3917087 3917467 . + 0 ID=cds3411;Parent=gene3504;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3917460 3918566 . + . ID=gene3505;Name=DJ40_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17595;old_locus_tag=DJ40_3466 NZ_CP008943.1 Protein Homology CDS 3917460 3918566 . + 0 ID=cds3412;Parent=gene3505;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3918607 3918786 . + . ID=id290;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3918817 3919572 . - . ID=gene3506;Name=DJ40_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17600;old_locus_tag=DJ40_3467 NZ_CP008943.1 Protein Homology CDS 3918817 3919572 . - 0 ID=cds3413;Parent=gene3506;Dbxref=Genbank:WP_011192868.1;Name=WP_011192868.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_011192868.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3919832 3921196 . - . ID=gene3507;Name=DJ40_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17605;old_locus_tag=DJ40_3468 NZ_CP008943.1 Protein Homology CDS 3919832 3921196 . - 0 ID=cds3414;Parent=gene3507;Dbxref=Genbank:WP_038401097.1;Name=WP_038401097.1;gbkey=CDS;product=LOG family protein;protein_id=WP_038401097.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3921349 3922194 . - . ID=gene3508;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=DJ40_RS17610;old_locus_tag=DJ40_3469 NZ_CP008943.1 Protein Homology CDS 3921349 3922194 . - 0 ID=cds3415;Parent=gene3508;Dbxref=Genbank:WP_011192866.1;Name=WP_011192866.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_011192866.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3922326 3922877 . + . ID=gene3509;Name=DJ40_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17615;old_locus_tag=DJ40_3470 NZ_CP008943.1 Protein Homology CDS 3922326 3922877 . + 0 ID=cds3416;Parent=gene3509;Dbxref=Genbank:WP_024063155.1;Name=WP_024063155.1;gbkey=CDS;product=protein Syd;protein_id=WP_024063155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3923256 3923513 . - . ID=gene3510;Name=DJ40_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17620 NZ_CP008943.1 GeneMarkS+ CDS 3923256 3923513 . - 0 ID=cds3417;Parent=gene3510;Dbxref=Genbank:WP_038401100.1;Name=WP_038401100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401100.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3923577 3923909 . + . ID=gene3511;Name=DJ40_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17625;old_locus_tag=DJ40_3471 NZ_CP008943.1 Protein Homology CDS 3923577 3923909 . + 0 ID=cds3418;Parent=gene3511;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3923909 3924682 . + . ID=gene3512;Name=DJ40_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17630;old_locus_tag=DJ40_3472 NZ_CP008943.1 Protein Homology CDS 3923909 3924682 . + 0 ID=cds3419;Parent=gene3512;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3924710 3925159 . + . ID=gene3513;Name=DJ40_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17635;old_locus_tag=DJ40_3473 NZ_CP008943.1 Protein Homology CDS 3924710 3925159 . + 0 ID=cds3420;Parent=gene3513;Dbxref=Genbank:WP_012104739.1;Name=WP_012104739.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_012104739.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3925249 3925638 . - . ID=gene3514;Name=DJ40_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17640;old_locus_tag=DJ40_3474 NZ_CP008943.1 Protein Homology CDS 3925249 3925638 . - 0 ID=cds3421;Parent=gene3514;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3925762 3926586 . - . ID=gene3515;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=DJ40_RS17645;old_locus_tag=DJ40_3475 NZ_CP008943.1 Protein Homology CDS 3925762 3926586 . - 0 ID=cds3422;Parent=gene3515;Dbxref=Genbank:WP_002212128.1;Name=WP_002212128.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3926761 3929442 . - . ID=gene3516;Name=DJ40_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17650;old_locus_tag=DJ40_3476 NZ_CP008943.1 Protein Homology CDS 3926761 3929442 . - 0 ID=cds3423;Parent=gene3516;Dbxref=Genbank:WP_002212129.1;Name=WP_002212129.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_002212129.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3929502 3930293 . - . ID=gene3517;Name=DJ40_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17655;old_locus_tag=DJ40_3477 NZ_CP008943.1 Protein Homology CDS 3929502 3930293 . - 0 ID=cds3424;Parent=gene3517;Dbxref=Genbank:WP_012104740.1;Name=WP_012104740.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_012104740.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3930728 3931453 . + . ID=gene3518;Name=DJ40_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17660;old_locus_tag=DJ40_3478 NZ_CP008943.1 Protein Homology CDS 3930728 3931453 . + 0 ID=cds3425;Parent=gene3518;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3931581 3932438 . + . ID=gene3519;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=DJ40_RS17665;old_locus_tag=DJ40_3479 NZ_CP008943.1 Protein Homology CDS 3931581 3932438 . + 0 ID=cds3426;Parent=gene3519;Dbxref=Genbank:WP_038401101.1;Name=WP_038401101.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_038401101.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3932647 3933372 . + . ID=gene3520;Name=DJ40_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17670;old_locus_tag=DJ40_3480 NZ_CP008943.1 Protein Homology CDS 3932647 3933372 . + 0 ID=cds3427;Parent=gene3520;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3933508 3934065 . + . ID=gene3521;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=DJ40_RS17675;old_locus_tag=DJ40_3481 NZ_CP008943.1 Protein Homology CDS 3933508 3934065 . + 0 ID=cds3428;Parent=gene3521;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3934279 3935475 . + . ID=gene3522;Name=DJ40_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17680;old_locus_tag=DJ40_3482 NZ_CP008943.1 Protein Homology CDS 3934279 3935475 . + 0 ID=cds3429;Parent=gene3522;Dbxref=Genbank:WP_038401103.1;Name=WP_038401103.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_038401103.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3935698 3936456 . + . ID=gene3523;Name=DJ40_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17685;old_locus_tag=DJ40_3483 NZ_CP008943.1 Protein Homology CDS 3935698 3936456 . + 0 ID=cds3430;Parent=gene3523;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3936466 3937314 . + . ID=gene3524;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=DJ40_RS17690;old_locus_tag=DJ40_3484 NZ_CP008943.1 Protein Homology CDS 3936466 3937314 . + 0 ID=cds3431;Parent=gene3524;Dbxref=Genbank:WP_002212137.1;Name=WP_002212137.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_002212137.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3937343 3938698 . + . ID=gene3525;Name=DJ40_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17695;old_locus_tag=DJ40_3485 NZ_CP008943.1 Protein Homology CDS 3937343 3938698 . + 0 ID=cds3432;Parent=gene3525;Dbxref=Genbank:WP_038401104.1;Name=WP_038401104.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=zinc metallopeptidase RseP;protein_id=WP_038401104.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3938735 3941122 . + . ID=gene3526;Name=DJ40_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17700;old_locus_tag=DJ40_3486 NZ_CP008943.1 Protein Homology CDS 3938735 3941122 . + 0 ID=cds3433;Parent=gene3526;Dbxref=Genbank:WP_002212139.1;Name=WP_002212139.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3941280 3941777 . + . ID=gene3527;Name=DJ40_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17705;old_locus_tag=DJ40_3487 NZ_CP008943.1 Protein Homology CDS 3941280 3941777 . + 0 ID=cds3434;Parent=gene3527;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3941781 3942803 . + . ID=gene3528;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=DJ40_RS17710;old_locus_tag=DJ40_3488 NZ_CP008943.1 Protein Homology CDS 3941781 3942803 . + 0 ID=cds3435;Parent=gene3528;Dbxref=Genbank:WP_012104741.1;Name=WP_012104741.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_012104741.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3942961 3943476 . + . ID=gene3529;Name=DJ40_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17715;old_locus_tag=DJ40_3489 NZ_CP008943.1 Protein Homology CDS 3942961 3943476 . + 0 ID=cds3436;Parent=gene3529;Dbxref=Genbank:WP_038401107.1;Name=WP_038401107.1;gbkey=CDS;product=hydroxymyristoyl-ACP dehydratase;protein_id=WP_038401107.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3943480 3944268 . + . ID=gene3530;Name=DJ40_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17720;old_locus_tag=DJ40_3490 NZ_CP008943.1 Protein Homology CDS 3943480 3944268 . + 0 ID=cds3437;Parent=gene3530;Dbxref=Genbank:WP_038401109.1;Name=WP_038401109.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=UDP-N-acetylglucosamine acyltransferase;protein_id=WP_038401109.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3944272 3945456 . + . ID=gene3531;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=DJ40_RS17725;old_locus_tag=DJ40_3491 NZ_CP008943.1 Protein Homology CDS 3944272 3945456 . + 0 ID=cds3438;Parent=gene3531;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3945453 3946049 . + . ID=gene3532;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=DJ40_RS17730;old_locus_tag=DJ40_3492 NZ_CP008943.1 Protein Homology CDS 3945453 3946049 . + 0 ID=cds3439;Parent=gene3532;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3946212 3949694 . + . ID=gene3533;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=DJ40_RS17735;old_locus_tag=DJ40_3493 NZ_CP008943.1 Protein Homology CDS 3946212 3949694 . + 0 ID=cds3440;Parent=gene3533;Dbxref=Genbank:WP_038401810.1;Name=WP_038401810.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_038401810.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3949707 3950666 . + . ID=gene3534;Name=DJ40_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17740;old_locus_tag=DJ40_3494 NZ_CP008943.1 Protein Homology CDS 3949707 3950666 . + 0 ID=cds3441;Parent=gene3534;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3950848 3951246 . + . ID=gene3535;Name=DJ40_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17745;old_locus_tag=DJ40_3495 NZ_CP008943.1 Protein Homology CDS 3950848 3951246 . + 0 ID=cds3442;Parent=gene3535;Dbxref=Genbank:WP_038401111.1;Name=WP_038401111.1;gbkey=CDS;product=lyase;protein_id=WP_038401111.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3951248 3952630 . + . ID=gene3536;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=DJ40_RS17750;old_locus_tag=DJ40_3496 NZ_CP008943.1 Protein Homology CDS 3951248 3952630 . + 0 ID=cds3443;Parent=gene3536;Dbxref=Genbank:WP_038401113.1;Name=WP_038401113.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_038401113.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3952905 3953222 . + . ID=gene3537;Name=DJ40_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17755;old_locus_tag=DJ40_3497 NZ_CP008943.1 Protein Homology CDS 3952905 3953222 . + 0 ID=cds3444;Parent=gene3537;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3953487 3953747 . - . ID=gene3538;Name=DJ40_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17760;old_locus_tag=DJ40_3498 NZ_CP008943.1 Protein Homology CDS 3953487 3953747 . - 0 ID=cds3445;Parent=gene3538;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3953734 3953934 . - . ID=gene3539;Name=DJ40_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17765;old_locus_tag=DJ40_3499 NZ_CP008943.1 Protein Homology CDS 3953734 3953934 . - 0 ID=cds3446;Parent=gene3539;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3954176 3954724 . + . ID=gene3540;Name=DJ40_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17770;old_locus_tag=DJ40_3500 NZ_CP008943.1 Protein Homology CDS 3954176 3954724 . + 0 ID=cds3447;Parent=gene3540;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3954727 3955143 . + . ID=gene3541;Name=DJ40_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17775;old_locus_tag=DJ40_3501 NZ_CP008943.1 Protein Homology CDS 3954727 3955143 . + 0 ID=cds3448;Parent=gene3541;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3955228 3955911 . + . ID=gene3542;Name=DJ40_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17780;old_locus_tag=DJ40_3502 NZ_CP008943.1 Protein Homology CDS 3955228 3955911 . + 0 ID=cds3449;Parent=gene3542;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3956045 3957763 . - . ID=gene3543;Name=DJ40_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17785;old_locus_tag=DJ40_3503 NZ_CP008943.1 Protein Homology CDS 3956045 3957763 . - 0 ID=cds3450;Parent=gene3543;Dbxref=Genbank:WP_012104744.1;Name=WP_012104744.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_012104744.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3957867 3958574 . - . ID=gene3544;Name=DJ40_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17790;old_locus_tag=DJ40_3504 NZ_CP008943.1 Protein Homology CDS 3957867 3958574 . - 0 ID=cds3451;Parent=gene3544;Dbxref=Genbank:WP_012104745.1;Name=WP_012104745.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_012104745.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3958571 3958978 . - . ID=gene3545;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=DJ40_RS17795;old_locus_tag=DJ40_3505 NZ_CP008943.1 Protein Homology CDS 3958571 3958978 . - 0 ID=cds3452;Parent=gene3545;Dbxref=Genbank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_002212158.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3959096 3959911 . - . ID=gene3546;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=DJ40_RS17800;old_locus_tag=DJ40_3506 NZ_CP008943.1 Protein Homology CDS 3959096 3959911 . - 0 ID=cds3453;Parent=gene3546;Dbxref=Genbank:WP_011192855.1;Name=WP_011192855.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_011192855.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3959975 3960628 . - . ID=gene3547;Name=DJ40_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17805;old_locus_tag=DJ40_3507 NZ_CP008943.1 Protein Homology CDS 3959975 3960628 . - 0 ID=cds3454;Parent=gene3547;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3960621 3961652 . - . ID=gene3548;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=DJ40_RS17810;old_locus_tag=DJ40_3508 NZ_CP008943.1 Protein Homology CDS 3960621 3961652 . - 0 ID=cds3455;Parent=gene3548;Dbxref=Genbank:WP_011192854.1;Name=WP_011192854.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine import ATP-binding protein MetN 2;protein_id=WP_011192854.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3961839 3962405 . + . ID=gene3549;Name=DJ40_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17815;old_locus_tag=DJ40_3509 NZ_CP008943.1 Protein Homology CDS 3961839 3962405 . + 0 ID=cds3456;Parent=gene3549;Dbxref=Genbank:WP_002220062.1;Name=WP_002220062.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3962561 3968250 . + . ID=id291;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3962844 3964394 . + . ID=gene3550;Name=DJ40_RS17825;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS17825;old_locus_tag=DJ40_3510 NZ_CP008943.1 RefSeq rRNA 3962844 3964394 . + . ID=rna84;Parent=gene3550;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq exon 3962844 3964394 . + . ID=id292;Parent=rna84;gbkey=rRNA;product=16S ribosomal RNA NZ_CP008943.1 RefSeq gene 3964494 3964570 . + . ID=gene3551;Name=DJ40_RS17830;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS17830;old_locus_tag=DJ40_3511 NZ_CP008943.1 tRNAscan-SE tRNA 3964494 3964570 . + . ID=rna85;Parent=gene3551;anticodon=(pos:3964528..3964530);gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 tRNAscan-SE exon 3964494 3964570 . + . ID=id293;Parent=rna85;anticodon=(pos:3964528..3964530);gbkey=tRNA;product=tRNA-Ile NZ_CP008943.1 RefSeq gene 3964622 3964697 . + . ID=gene3552;Name=DJ40_RS17835;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS17835;old_locus_tag=DJ40_3512 NZ_CP008943.1 tRNAscan-SE tRNA 3964622 3964697 . + . ID=rna86;Parent=gene3552;anticodon=(pos:3964655..3964657);gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 tRNAscan-SE exon 3964622 3964697 . + . ID=id294;Parent=rna86;anticodon=(pos:3964655..3964657);gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 RefSeq gene 3964907 3967840 . + . ID=gene3553;Name=DJ40_RS17840;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS17840;old_locus_tag=DJ40_3513 NZ_CP008943.1 RefSeq rRNA 3964907 3967840 . + . ID=rna87;Parent=gene3553;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq exon 3964907 3967840 . + . ID=id295;Parent=rna87;gbkey=rRNA;product=23S ribosomal RNA NZ_CP008943.1 RefSeq gene 3967932 3968047 . + . ID=gene3554;Name=DJ40_RS17845;gbkey=Gene;gene_biotype=rRNA;locus_tag=DJ40_RS17845;old_locus_tag=DJ40_3514 NZ_CP008943.1 cmsearch rRNA 3967932 3968047 . + . ID=rna88;Parent=gene3554;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 cmsearch exon 3967932 3968047 . + . ID=id296;Parent=rna88;gbkey=rRNA;product=5S ribosomal RNA NZ_CP008943.1 RefSeq gene 3968173 3968249 . + . ID=gene3555;Name=DJ40_RS17850;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS17850;old_locus_tag=DJ40_3515 NZ_CP008943.1 tRNAscan-SE tRNA 3968173 3968249 . + . ID=rna89;Parent=gene3555;anticodon=(pos:3968207..3968209);gbkey=tRNA;product=tRNA-Asp NZ_CP008943.1 tRNAscan-SE exon 3968173 3968249 . + . ID=id297;Parent=rna89;anticodon=(pos:3968207..3968209);gbkey=tRNA;product=tRNA-Asp NZ_CP008943.1 RefSeq gene 3968622 3969425 . + . ID=gene3556;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=DJ40_RS17855;old_locus_tag=DJ40_3516 NZ_CP008943.1 Protein Homology CDS 3968622 3969425 . + 0 ID=cds3457;Parent=gene3556;Dbxref=Genbank:WP_002210693.1;Name=WP_002210693.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase B;protein_id=WP_002210693.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3969478 3969929 . + . ID=gene3557;Name=DJ40_RS17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS17860;pseudo=true NZ_CP008943.1 Protein Homology CDS 3969478 3969929 . + 0 ID=cds3458;Parent=gene3557;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 3970311 3971072 . + . ID=gene3558;Name=DJ40_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17865;old_locus_tag=DJ40_3518 NZ_CP008943.1 Protein Homology CDS 3970311 3971072 . + 0 ID=cds3459;Parent=gene3558;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3971115 3972494 . - . ID=gene3559;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=DJ40_RS17870;old_locus_tag=DJ40_3519 NZ_CP008943.1 Protein Homology CDS 3971115 3972494 . - 0 ID=cds3460;Parent=gene3559;Dbxref=Genbank:WP_012104749.1;Name=WP_012104749.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_012104749.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3972566 3973321 . - . ID=gene3560;Name=DJ40_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17875;old_locus_tag=DJ40_3520 NZ_CP008943.1 Protein Homology CDS 3972566 3973321 . - 0 ID=cds3461;Parent=gene3560;Dbxref=Genbank:WP_038401116.1;Name=WP_038401116.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_038401116.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3973366 3974085 . + . ID=gene3561;Name=DJ40_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17880;old_locus_tag=DJ40_3521 NZ_CP008943.1 Protein Homology CDS 3973366 3974085 . + 0 ID=cds3462;Parent=gene3561;Dbxref=Genbank:WP_002210698.1;Name=WP_002210698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210698.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3974140 3974604 . - . ID=gene3562;Name=DJ40_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17885;old_locus_tag=DJ40_3522 NZ_CP008943.1 Protein Homology CDS 3974140 3974604 . - 0 ID=cds3463;Parent=gene3562;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3974674 3975438 . + . ID=gene3563;Name=DJ40_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17890;old_locus_tag=DJ40_3523 NZ_CP008943.1 Protein Homology CDS 3974674 3975438 . + 0 ID=cds3464;Parent=gene3563;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3975551 3975627 . + . ID=gene3564;Name=DJ40_RS17895;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS17895;old_locus_tag=DJ40_3524 NZ_CP008943.1 tRNAscan-SE tRNA 3975551 3975627 . + . ID=rna90;Parent=gene3564;anticodon=(pos:3975585..3975587);gbkey=tRNA;product=tRNA-Asp NZ_CP008943.1 tRNAscan-SE exon 3975551 3975627 . + . ID=id298;Parent=rna90;anticodon=(pos:3975585..3975587);gbkey=tRNA;product=tRNA-Asp NZ_CP008943.1 RefSeq gene 3975684 3977168 . - . ID=gene3565;Name=DJ40_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17900;old_locus_tag=DJ40_3525 NZ_CP008943.1 Protein Homology CDS 3975684 3977168 . - 0 ID=cds3465;Parent=gene3565;Dbxref=Genbank:WP_038401119.1;Name=WP_038401119.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_038401119.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3977489 3978439 . + . ID=gene3566;Name=DJ40_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17905;old_locus_tag=DJ40_3526 NZ_CP008943.1 Protein Homology CDS 3977489 3978439 . + 0 ID=cds3466;Parent=gene3566;Dbxref=Genbank:WP_011192850.1;Name=WP_011192850.1;gbkey=CDS;product=allantoinase;protein_id=WP_011192850.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 3978468 3978638 . + . ID=id299;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 3978669 3979673 . - . ID=gene3567;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=DJ40_RS17910;old_locus_tag=DJ40_3527 NZ_CP008943.1 Protein Homology CDS 3978669 3979673 . - 0 ID=cds3467;Parent=gene3567;Dbxref=Genbank:WP_002215933.1;Name=WP_002215933.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002215933.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3979721 3980887 . - . ID=gene3568;Name=DJ40_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17915;old_locus_tag=DJ40_3528 NZ_CP008943.1 Protein Homology CDS 3979721 3980887 . - 0 ID=cds3468;Parent=gene3568;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3980880 3982079 . - . ID=gene3569;Name=DJ40_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17920;old_locus_tag=DJ40_3529 NZ_CP008943.1 Protein Homology CDS 3980880 3982079 . - 0 ID=cds3469;Parent=gene3569;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3982755 3983726 . - . ID=gene3570;Name=DJ40_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17925;old_locus_tag=DJ40_3530 NZ_CP008943.1 Protein Homology CDS 3982755 3983726 . - 0 ID=cds3470;Parent=gene3570;Dbxref=Genbank:WP_002212211.1;Name=WP_002212211.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3983833 3985983 . - . ID=gene3571;Name=DJ40_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17930;old_locus_tag=DJ40_3531 NZ_CP008943.1 Protein Homology CDS 3983833 3985983 . - 0 ID=cds3471;Parent=gene3571;Dbxref=Genbank:WP_002212212.1;Name=WP_002212212.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002212212.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3985965 3986369 . - . ID=gene3572;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=DJ40_RS17935;old_locus_tag=DJ40_3532 NZ_CP008943.1 Protein Homology CDS 3985965 3986369 . - 0 ID=cds3472;Parent=gene3572;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3986383 3986619 . - . ID=gene3573;Name=DJ40_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17940;old_locus_tag=DJ40_3533 NZ_CP008943.1 Protein Homology CDS 3986383 3986619 . - 0 ID=cds3473;Parent=gene3573;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3987141 3987506 . + . ID=gene3574;Name=DJ40_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17945;old_locus_tag=DJ40_3534 NZ_CP008943.1 Protein Homology CDS 3987141 3987506 . + 0 ID=cds3474;Parent=gene3574;Dbxref=Genbank:WP_011192847.1;Name=WP_011192847.1;gbkey=CDS;product=acid shock protein;protein_id=WP_011192847.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3987985 3988320 . + . ID=gene3575;Name=DJ40_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17950;old_locus_tag=DJ40_3535 NZ_CP008943.1 Protein Homology CDS 3987985 3988320 . + 0 ID=cds3475;Parent=gene3575;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3988418 3988867 . - . ID=gene3576;Name=DJ40_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17955;old_locus_tag=DJ40_3536 NZ_CP008943.1 Protein Homology CDS 3988418 3988867 . - 0 ID=cds3476;Parent=gene3576;Dbxref=Genbank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212217.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3989032 3989370 . - . ID=gene3577;Name=DJ40_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17960;old_locus_tag=DJ40_3537 NZ_CP008943.1 Protein Homology CDS 3989032 3989370 . - 0 ID=cds3477;Parent=gene3577;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11 NZ_CP008943.1 cmsearch region 3989700 3990161 . + . ID=id300;Note=cspA;gbkey=misc_feature NZ_CP008943.1 RefSeq gene 3989878 3990090 . + . ID=gene3578;Name=DJ40_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17965;old_locus_tag=DJ40_3538 NZ_CP008943.1 Protein Homology CDS 3989878 3990090 . + 0 ID=cds3478;Parent=gene3578;Dbxref=Genbank:WP_002212220.1;Name=WP_002212220.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_002212220.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3990879 3992456 . + . ID=gene3579;Name=DJ40_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17970;old_locus_tag=DJ40_3539 NZ_CP008943.1 Protein Homology CDS 3990879 3992456 . + 0 ID=cds3479;Parent=gene3579;Dbxref=Genbank:WP_011192846.1;Name=WP_011192846.1;gbkey=CDS;product=nickel ABC transporter substrate-binding protein;protein_id=WP_011192846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3992441 3993424 . + . ID=gene3580;Name=DJ40_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17975;old_locus_tag=DJ40_3540 NZ_CP008943.1 Protein Homology CDS 3992441 3993424 . + 0 ID=cds3480;Parent=gene3580;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3993421 3994227 . + . ID=gene3581;Name=DJ40_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17980;old_locus_tag=DJ40_3541 NZ_CP008943.1 Protein Homology CDS 3993421 3994227 . + 0 ID=cds3481;Parent=gene3581;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3994227 3995033 . + . ID=gene3582;Name=DJ40_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17985;old_locus_tag=DJ40_3542 NZ_CP008943.1 Protein Homology CDS 3994227 3995033 . + 0 ID=cds3482;Parent=gene3582;Dbxref=Genbank:WP_038401120.1;Name=WP_038401120.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_038401120.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3995026 3995691 . + . ID=gene3583;Name=DJ40_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17990;old_locus_tag=DJ40_3543 NZ_CP008943.1 Protein Homology CDS 3995026 3995691 . + 0 ID=cds3483;Parent=gene3583;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3996890 3997192 . + . ID=gene3584;Name=DJ40_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS17995;old_locus_tag=DJ40_3545 NZ_CP008943.1 Protein Homology CDS 3996890 3997192 . + 0 ID=cds3484;Parent=gene3584;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3997245 3997679 . + . ID=gene3585;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=DJ40_RS18000;old_locus_tag=DJ40_3546 NZ_CP008943.1 Protein Homology CDS 3997245 3997679 . + 0 ID=cds3485;Parent=gene3585;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3997769 3999487 . + . ID=gene3586;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=DJ40_RS18005;old_locus_tag=DJ40_3547 NZ_CP008943.1 Protein Homology CDS 3997769 3999487 . + 0 ID=cds3486;Parent=gene3586;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NZ_CP008943.1 RefSeq gene 3999783 4000478 . + . ID=gene3587;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=DJ40_RS18010;old_locus_tag=DJ40_3548 NZ_CP008943.1 Protein Homology CDS 3999783 4000478 . + 0 ID=cds3487;Parent=gene3587;Dbxref=Genbank:WP_011192844.1;Name=WP_011192844.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_011192844.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4000500 4001186 . + . ID=gene3588;Name=DJ40_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18015;old_locus_tag=DJ40_3549 NZ_CP008943.1 Protein Homology CDS 4000500 4001186 . + 0 ID=cds3488;Parent=gene3588;Dbxref=Genbank:WP_011192843.1;Name=WP_011192843.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_011192843.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4001313 4001975 . + . ID=gene3589;Name=DJ40_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18020;old_locus_tag=DJ40_3550 NZ_CP008943.1 Protein Homology CDS 4001313 4001975 . + 0 ID=cds3489;Parent=gene3589;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4001972 4002937 . + . ID=gene3590;Name=DJ40_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18025;old_locus_tag=DJ40_3551 NZ_CP008943.1 Protein Homology CDS 4001972 4002937 . + 0 ID=cds3490;Parent=gene3590;Dbxref=Genbank:WP_011192842.1;Name=WP_011192842.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_011192842.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4003129 4004121 . + . ID=gene3591;Name=DJ40_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18030;old_locus_tag=DJ40_3552 NZ_CP008943.1 Protein Homology CDS 4003129 4004121 . + 0 ID=cds3491;Parent=gene3591;Dbxref=Genbank:WP_011192841.1;Name=WP_011192841.1;gbkey=CDS;product=urea transporter;protein_id=WP_011192841.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4004270 4005328 . + . ID=gene3592;Name=DJ40_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18035;old_locus_tag=DJ40_3553 NZ_CP008943.1 Protein Homology CDS 4004270 4005328 . + 0 ID=cds3492;Parent=gene3592;Dbxref=Genbank:WP_011192840.1;Name=WP_011192840.1;gbkey=CDS;product=nickel transporter;protein_id=WP_011192840.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4005477 4005806 . - . ID=gene3593;Name=DJ40_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18040;old_locus_tag=DJ40_3554 NZ_CP008943.1 Protein Homology CDS 4005477 4005806 . - 0 ID=cds3493;Parent=gene3593;Dbxref=Genbank:WP_038401124.1;Name=WP_038401124.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_038401124.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4005805 4006035 . + . ID=gene3594;Name=DJ40_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18045 NZ_CP008943.1 Protein Homology CDS 4005805 4006035 . + 0 ID=cds3494;Parent=gene3594;Dbxref=Genbank:WP_032466576.1;Name=WP_032466576.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466576.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4006425 4007600 . + . ID=gene3595;Name=DJ40_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18050;old_locus_tag=DJ40_3555 NZ_CP008943.1 Protein Homology CDS 4006425 4007600 . + 0 ID=cds3495;Parent=gene3595;Dbxref=Genbank:WP_011192839.1;Name=WP_011192839.1;gbkey=CDS;product=voltage-gated potassium channel TrkA;protein_id=WP_011192839.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4007698 4008102 . - . ID=gene3596;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=DJ40_RS18055;old_locus_tag=DJ40_3556 NZ_CP008943.1 Protein Homology CDS 4007698 4008102 . - 0 ID=cds3496;Parent=gene3596;Dbxref=Genbank:WP_038401812.1;Name=WP_038401812.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_038401812.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4008118 4008498 . - . ID=gene3597;Name=DJ40_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18060;old_locus_tag=DJ40_3557 NZ_CP008943.1 Protein Homology CDS 4008118 4008498 . - 0 ID=cds3497;Parent=gene3597;Dbxref=Genbank:WP_011192838.1;Name=WP_011192838.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_011192838.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4008587 4008766 . - . ID=gene3598;Name=DJ40_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18065 NZ_CP008943.1 Protein Homology CDS 4008587 4008766 . - 0 ID=cds3498;Parent=gene3598;Dbxref=Genbank:WP_012104765.1;Name=WP_012104765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104765.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4009538 4009855 . + . ID=gene3599;Name=DJ40_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18070;old_locus_tag=DJ40_3558 NZ_CP008943.1 Protein Homology CDS 4009538 4009855 . + 0 ID=cds3499;Parent=gene3599;Dbxref=Genbank:WP_011192837.1;Name=WP_011192837.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_011192837.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4009866 4011227 . + . ID=gene3600;Name=DJ40_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18075;old_locus_tag=DJ40_3559 NZ_CP008943.1 Protein Homology CDS 4009866 4011227 . + 0 ID=cds3500;Parent=gene3600;Dbxref=Genbank:WP_002212241.1;Name=WP_002212241.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4011394 4011741 . + . ID=gene3601;Name=DJ40_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18080;old_locus_tag=DJ40_3560 NZ_CP008943.1 Protein Homology CDS 4011394 4011741 . + 0 ID=cds3501;Parent=gene3601;Dbxref=Genbank:WP_024063001.1;Name=WP_024063001.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS system IIA component;protein_id=WP_024063001.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4011790 4012620 . + . ID=gene3602;Name=DJ40_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18085;old_locus_tag=DJ40_3561 NZ_CP008943.1 Protein Homology CDS 4011790 4012620 . + 0 ID=cds3502;Parent=gene3602;Dbxref=Genbank:WP_002212243.1;Name=WP_002212243.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212243.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4012672 4013433 . + . ID=gene3603;Name=DJ40_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18090;old_locus_tag=DJ40_3562 NZ_CP008943.1 Protein Homology CDS 4012672 4013433 . + 0 ID=cds3503;Parent=gene3603;Dbxref=Genbank:WP_038401127.1;Name=WP_038401127.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_038401127.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4013440 4013616 . - . ID=gene3604;Name=DJ40_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18095;old_locus_tag=DJ40_3563 NZ_CP008943.1 Protein Homology CDS 4013440 4013616 . - 0 ID=cds3504;Parent=gene3604;Dbxref=Genbank:WP_002212245.1;Name=WP_002212245.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212245.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4013729 4014097 . - . ID=gene3605;Name=DJ40_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18100;old_locus_tag=DJ40_3564 NZ_CP008943.1 Protein Homology CDS 4013729 4014097 . - 0 ID=cds3505;Parent=gene3605;Dbxref=Genbank:WP_012303771.1;Name=WP_012303771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303771.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4014282 4014494 . + . ID=gene3606;Name=DJ40_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18105 NZ_CP008943.1 Protein Homology CDS 4014282 4014494 . + 0 ID=cds3506;Parent=gene3606;Dbxref=Genbank:WP_032466573.1;Name=WP_032466573.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466573.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4014592 4015119 . + . ID=gene3607;Name=DJ40_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18110;old_locus_tag=DJ40_3565 NZ_CP008943.1 Protein Homology CDS 4014592 4015119 . + 0 ID=cds3507;Parent=gene3607;Dbxref=Genbank:WP_011192836.1;Name=WP_011192836.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_011192836.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4015192 4016835 . + . ID=gene3608;Name=DJ40_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18115;old_locus_tag=DJ40_3566 NZ_CP008943.1 Protein Homology CDS 4015192 4016835 . + 0 ID=cds3508;Parent=gene3608;Dbxref=Genbank:WP_024063000.1;Name=WP_024063000.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_024063000.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4017053 4017166 . + . ID=gene3609;Name=DJ40_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18120 NZ_CP008943.1 Protein Homology CDS 4017053 4017166 . + 0 ID=cds3509;Parent=gene3609;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4017209 4017451 . + . ID=gene3610;Name=DJ40_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18125;old_locus_tag=DJ40_3567 NZ_CP008943.1 Protein Homology CDS 4017209 4017451 . + 0 ID=cds3510;Parent=gene3610;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4017579 4018007 . - . ID=gene3611;Name=DJ40_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18130;old_locus_tag=DJ40_3568 NZ_CP008943.1 Protein Homology CDS 4017579 4018007 . - 0 ID=cds3511;Parent=gene3611;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4018102 4018788 . - . ID=gene3612;Name=DJ40_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18135;old_locus_tag=DJ40_3569 NZ_CP008943.1 Protein Homology CDS 4018102 4018788 . - 0 ID=cds3512;Parent=gene3612;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4018847 4019236 . + . ID=id301;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4019272 4021998 . - . ID=gene3613;Name=DJ40_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18140;old_locus_tag=DJ40_3570 NZ_CP008943.1 Protein Homology CDS 4019272 4021998 . - 0 ID=cds3513;Parent=gene3613;Dbxref=Genbank:WP_002209649.1;Name=WP_002209649.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_002209649.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4022008 4022658 . - . ID=gene3614;Name=DJ40_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18145;old_locus_tag=DJ40_3571 NZ_CP008943.1 Protein Homology CDS 4022008 4022658 . - 0 ID=cds3514;Parent=gene3614;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4022822 4024888 . - . ID=gene3615;Name=DJ40_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18150;old_locus_tag=DJ40_3572 NZ_CP008943.1 Protein Homology CDS 4022822 4024888 . - 0 ID=cds3515;Parent=gene3615;Dbxref=Genbank:WP_011192833.1;Name=WP_011192833.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_011192833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4024982 4026670 . - . ID=gene3616;Name=DJ40_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18155;old_locus_tag=DJ40_3573 NZ_CP008943.1 Protein Homology CDS 4024982 4026670 . - 0 ID=cds3516;Parent=gene3616;Dbxref=Genbank:WP_038401132.1;Name=WP_038401132.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_038401132.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4026671 4026760 . - . ID=gene3617;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=DJ40_RS18160 NZ_CP008943.1 Protein Homology CDS 4026671 4026760 . - 0 ID=cds3517;Parent=gene3617;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4026757 4026999 . - . ID=gene3618;Name=DJ40_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18165 NZ_CP008943.1 Protein Homology CDS 4026757 4026999 . - 0 ID=cds3518;Parent=gene3618;Dbxref=Genbank:WP_002216017.1;Name=WP_002216017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216017.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4027165 4027371 . + . ID=gene3619;Name=DJ40_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18170;old_locus_tag=DJ40_3574 NZ_CP008943.1 Protein Homology CDS 4027165 4027371 . + 0 ID=cds3519;Parent=gene3619;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4027585 4027845 . + . ID=gene3620;Name=DJ40_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18175 NZ_CP008943.1 Protein Homology CDS 4027585 4027845 . + 0 ID=cds3520;Parent=gene3620;Dbxref=Genbank:WP_038401815.1;Name=WP_038401815.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401815.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4027761 4028267 . + . ID=gene3621;Name=DJ40_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18180;old_locus_tag=DJ40_3575 NZ_CP008943.1 Protein Homology CDS 4027761 4028267 . + 0 ID=cds3521;Parent=gene3621;Dbxref=Genbank:WP_012104774.1;Name=WP_012104774.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4028373 4029836 . + . ID=gene3622;Name=DJ40_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18185;old_locus_tag=DJ40_3576 NZ_CP008943.1 Protein Homology CDS 4028373 4029836 . + 0 ID=cds3522;Parent=gene3622;Dbxref=Genbank:WP_011192831.1;Name=WP_011192831.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_011192831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4029827 4030864 . + . ID=gene3623;Name=DJ40_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18190;old_locus_tag=DJ40_3577 NZ_CP008943.1 Protein Homology CDS 4029827 4030864 . + 0 ID=cds3523;Parent=gene3623;Dbxref=Genbank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002209656.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4031007 4031750 . + . ID=gene3624;Name=DJ40_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18195;old_locus_tag=DJ40_3578 NZ_CP008943.1 Protein Homology CDS 4031007 4031750 . + 0 ID=cds3524;Parent=gene3624;Dbxref=Genbank:WP_025471060.1;Name=WP_025471060.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_025471060.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4032370 4033026 . + . ID=gene3625;Name=DJ40_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18200;old_locus_tag=DJ40_3580 NZ_CP008943.1 Protein Homology CDS 4032370 4033026 . + 0 ID=cds3525;Parent=gene3625;Dbxref=Genbank:WP_011192830.1;Name=WP_011192830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192830.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4033020 4033970 . + . ID=gene3626;Name=DJ40_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18205;old_locus_tag=DJ40_3581 NZ_CP008943.1 Protein Homology CDS 4033020 4033970 . + 0 ID=cds3526;Parent=gene3626;Dbxref=Genbank:WP_002209658.1;Name=WP_002209658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209658.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4033967 4034704 . + . ID=gene3627;Name=DJ40_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18210;old_locus_tag=DJ40_3582 NZ_CP008943.1 Protein Homology CDS 4033967 4034704 . + 0 ID=cds3527;Parent=gene3627;Dbxref=Genbank:WP_002209659.1;Name=WP_002209659.1;gbkey=CDS;product=LamB/YcsF family protein;protein_id=WP_002209659.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4034789 4035520 . + . ID=gene3628;Name=DJ40_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18215;old_locus_tag=DJ40_3583 NZ_CP008943.1 Protein Homology CDS 4034789 4035520 . + 0 ID=cds3528;Parent=gene3628;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4035517 4036536 . + . ID=gene3629;Name=DJ40_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18220;old_locus_tag=DJ40_3584 NZ_CP008943.1 Protein Homology CDS 4035517 4036536 . + 0 ID=cds3529;Parent=gene3629;Dbxref=Genbank:WP_038401134.1;Name=WP_038401134.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401134.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4036546 4037194 . + . ID=gene3630;Name=DJ40_RS18225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS18225;old_locus_tag=DJ40_3585;pseudo=true NZ_CP008943.1 Protein Homology CDS 4036546 4037194 . + 0 ID=cds3530;Parent=gene3630;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4037285 4037971 . - . ID=gene3631;Name=DJ40_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18230;old_locus_tag=DJ40_3586 NZ_CP008943.1 Protein Homology CDS 4037285 4037971 . - 0 ID=cds3531;Parent=gene3631;Dbxref=Genbank:WP_012303780.1;Name=WP_012303780.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_012303780.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4038323 4038706 . + . ID=gene3632;Name=DJ40_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18235;old_locus_tag=DJ40_3587 NZ_CP008943.1 Protein Homology CDS 4038323 4038706 . + 0 ID=cds3532;Parent=gene3632;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4038885 4039847 . + . ID=gene3633;Name=DJ40_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18240;old_locus_tag=DJ40_3588 NZ_CP008943.1 Protein Homology CDS 4038885 4039847 . + 0 ID=cds3533;Parent=gene3633;Dbxref=Genbank:WP_002209665.1;Name=WP_002209665.1;gbkey=CDS;product=phospholipase A;protein_id=WP_002209665.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4039840 4039938 . + . ID=gene3634;Name=DJ40_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18245;old_locus_tag=DJ40_3589 NZ_CP008943.1 Protein Homology CDS 4039840 4039938 . + 0 ID=cds3534;Parent=gene3634;Dbxref=Genbank:WP_002228379.1;Name=WP_002228379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228379.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4039925 4040581 . + . ID=gene3635;Name=DJ40_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18250;old_locus_tag=DJ40_3590 NZ_CP008943.1 Protein Homology CDS 4039925 4040581 . + 0 ID=cds3535;Parent=gene3635;Dbxref=Genbank:WP_002209667.1;Name=WP_002209667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209667.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4040712 4042037 . - . ID=gene3636;Name=DJ40_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18255;old_locus_tag=DJ40_3592 NZ_CP008943.1 Protein Homology CDS 4040712 4042037 . - 0 ID=cds3536;Parent=gene3636;Dbxref=Genbank:WP_012104783.1;Name=WP_012104783.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=RNA helicase;protein_id=WP_012104783.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4042289 4043035 . + . ID=gene3637;Name=DJ40_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18260;old_locus_tag=DJ40_3593 NZ_CP008943.1 Protein Homology CDS 4042289 4043035 . + 0 ID=cds3537;Parent=gene3637;Dbxref=Genbank:WP_038401137.1;Name=WP_038401137.1;gbkey=CDS;product=tRNA (adenine-N6)-methyltransferase;protein_id=WP_038401137.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4043103 4043279 . + . ID=id302;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4043318 4044955 . - . ID=gene3638;Name=DJ40_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18265;old_locus_tag=DJ40_3594 NZ_CP008943.1 Protein Homology CDS 4043318 4044955 . - 0 ID=cds3538;Parent=gene3638;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4045143 4045718 . + . ID=gene3639;Name=DJ40_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18270;old_locus_tag=DJ40_3595 NZ_CP008943.1 Protein Homology CDS 4045143 4045718 . + 0 ID=cds3539;Parent=gene3639;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4045744 4046400 . + . ID=gene3640;Name=DJ40_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18275;old_locus_tag=DJ40_3596 NZ_CP008943.1 Protein Homology CDS 4045744 4046400 . + 0 ID=cds3540;Parent=gene3640;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4046400 4047356 . + . ID=gene3641;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=DJ40_RS18280;old_locus_tag=DJ40_3597 NZ_CP008943.1 Protein Homology CDS 4046400 4047356 . + 0 ID=cds3541;Parent=gene3641;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4047353 4047808 . + . ID=gene3642;Name=DJ40_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18285;old_locus_tag=DJ40_3598 NZ_CP008943.1 Protein Homology CDS 4047353 4047808 . + 0 ID=cds3542;Parent=gene3642;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4047829 4048683 . - . ID=gene3643;Name=DJ40_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18290;old_locus_tag=DJ40_3599 NZ_CP008943.1 Protein Homology CDS 4047829 4048683 . - 0 ID=cds3543;Parent=gene3643;Dbxref=Genbank:WP_038401139.1;Name=WP_038401139.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401139.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4049183 4050982 . + . ID=gene3644;Name=DJ40_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18295;old_locus_tag=DJ40_3600 NZ_CP008943.1 Protein Homology CDS 4049183 4050982 . + 0 ID=cds3544;Parent=gene3644;Dbxref=Genbank:WP_002209677.1;Name=WP_002209677.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4050992 4051990 . + . ID=gene3645;Name=DJ40_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18300;old_locus_tag=DJ40_3601 NZ_CP008943.1 Protein Homology CDS 4050992 4051990 . + 0 ID=cds3545;Parent=gene3645;Dbxref=Genbank:WP_002209678.1;Name=WP_002209678.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4052342 4053022 . + . ID=gene3646;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=DJ40_RS18305;old_locus_tag=DJ40_3602 NZ_CP008943.1 Protein Homology CDS 4052342 4053022 . + 0 ID=cds3546;Parent=gene3646;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4053019 4053930 . + . ID=gene3647;Name=DJ40_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18310;old_locus_tag=DJ40_3603 NZ_CP008943.1 Protein Homology CDS 4053019 4053930 . + 0 ID=cds3547;Parent=gene3647;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4053940 4054665 . + . ID=gene3648;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=DJ40_RS18315;old_locus_tag=DJ40_3604 NZ_CP008943.1 Protein Homology CDS 4053940 4054665 . + 0 ID=cds3548;Parent=gene3648;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4054824 4055555 . + . ID=gene3649;Name=DJ40_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18320;old_locus_tag=DJ40_3605 NZ_CP008943.1 Protein Homology CDS 4054824 4055555 . + 0 ID=cds3549;Parent=gene3649;Dbxref=Genbank:WP_012104785.1;Name=WP_012104785.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_012104785.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4055555 4055935 . + . ID=gene3650;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=DJ40_RS18325;old_locus_tag=DJ40_3606 NZ_CP008943.1 Protein Homology CDS 4055555 4055935 . + 0 ID=cds3550;Parent=gene3650;Dbxref=Genbank:WP_011192825.1;Name=WP_011192825.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_011192825.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4056041 4056301 . - . ID=gene3651;Name=DJ40_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18330;old_locus_tag=DJ40_3607 NZ_CP008943.1 Protein Homology CDS 4056041 4056301 . - 0 ID=cds3551;Parent=gene3651;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4056516 4057916 . + . ID=gene3652;Name=DJ40_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18335;old_locus_tag=DJ40_3609 NZ_CP008943.1 Protein Homology CDS 4056516 4057916 . + 0 ID=cds3552;Parent=gene3652;Dbxref=Genbank:WP_038401141.1;Name=WP_038401141.1;gbkey=CDS;product=recombinase;protein_id=WP_038401141.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4057913 4058128 . - . ID=gene3653;Name=DJ40_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18340;old_locus_tag=DJ40_3608 NZ_CP008943.1 Protein Homology CDS 4057913 4058128 . - 0 ID=cds3553;Parent=gene3653;Dbxref=Genbank:WP_038401143.1;Name=WP_038401143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401143.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4058125 4059462 . - . ID=gene3654;Name=DJ40_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18345;old_locus_tag=DJ40_3610 NZ_CP008943.1 Protein Homology CDS 4058125 4059462 . - 0 ID=cds3554;Parent=gene3654;Dbxref=Genbank:WP_049862815.1;Name=WP_049862815.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862815.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4060331 4061092 . + . ID=gene3655;Name=DJ40_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18355;old_locus_tag=DJ40_3611 NZ_CP008943.1 Protein Homology CDS 4060331 4061092 . + 0 ID=cds3555;Parent=gene3655;Dbxref=Genbank:WP_049862816.1;Name=WP_049862816.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862816.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4061189 4061929 . + . ID=gene3656;Name=DJ40_RS18360;end_range=4061929,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS18360;old_locus_tag=DJ40_3613;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 4061189 4061929 . + 0 ID=cds3556;Parent=gene3656;end_range=4061929,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4062061 4062441 . - . ID=gene3657;Name=DJ40_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18365;old_locus_tag=DJ40_3612 NZ_CP008943.1 Protein Homology CDS 4062061 4062441 . - 0 ID=cds3557;Parent=gene3657;Dbxref=Genbank:WP_038401145.1;Name=WP_038401145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401145.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4062426 4062770 . - . ID=gene3658;Name=DJ40_RS18370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS18370;old_locus_tag=DJ40_3614;partial=true;pseudo=true;start_range=.,4062426 NZ_CP008943.1 Protein Homology CDS 4062426 4062770 . - 0 ID=cds3558;Parent=gene3658;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4062426;transl_table=11 NZ_CP008943.1 RefSeq gene 4062783 4064093 . - . ID=gene3659;Name=DJ40_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18375;old_locus_tag=DJ40_3615 NZ_CP008943.1 Protein Homology CDS 4062783 4064093 . - 0 ID=cds3559;Parent=gene3659;Dbxref=Genbank:WP_038401147.1;Name=WP_038401147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401147.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4064096 4064830 . - . ID=gene3660;Name=DJ40_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18380;old_locus_tag=DJ40_3616 NZ_CP008943.1 Protein Homology CDS 4064096 4064830 . - 0 ID=cds3560;Parent=gene3660;Dbxref=Genbank:WP_038401149.1;Name=WP_038401149.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401149.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4065392 4066069 . - . ID=gene3661;Name=DJ40_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18385;old_locus_tag=DJ40_3617 NZ_CP008943.1 Protein Homology CDS 4065392 4066069 . - 0 ID=cds3561;Parent=gene3661;Dbxref=Genbank:WP_038401151.1;Name=WP_038401151.1;gbkey=CDS;product=phage repressor protein;protein_id=WP_038401151.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4066210 4066410 . + . ID=gene3662;Name=DJ40_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18390;old_locus_tag=DJ40_3618 NZ_CP008943.1 Protein Homology CDS 4066210 4066410 . + 0 ID=cds3562;Parent=gene3662;Dbxref=Genbank:WP_038401153.1;Name=WP_038401153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401153.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4066414 4068588 . + . ID=gene3663;Name=DJ40_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18395 NZ_CP008943.1 Protein Homology CDS 4066414 4068588 . + 0 ID=cds3563;Parent=gene3663;Dbxref=Genbank:WP_049862795.1;Name=WP_049862795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862795.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4068867 4069079 . + . ID=gene3664;Name=DJ40_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18400;old_locus_tag=DJ40_3620 NZ_CP008943.1 Protein Homology CDS 4068867 4069079 . + 0 ID=cds3564;Parent=gene3664;Dbxref=Genbank:WP_038401155.1;Name=WP_038401155.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401155.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4069161 4069586 . + . ID=gene3665;Name=DJ40_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18405;old_locus_tag=DJ40_3621 NZ_CP008943.1 Protein Homology CDS 4069161 4069586 . + 0 ID=cds3565;Parent=gene3665;Dbxref=Genbank:WP_038401156.1;Name=WP_038401156.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_038401156.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4069958 4070338 . + . ID=gene3666;Name=DJ40_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18410;old_locus_tag=DJ40_3622 NZ_CP008943.1 Protein Homology CDS 4069958 4070338 . + 0 ID=cds3566;Parent=gene3666;Dbxref=Genbank:WP_012303802.1;Name=WP_012303802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303802.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4070477 4070947 . - . ID=gene3667;Name=DJ40_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18415;old_locus_tag=DJ40_3623 NZ_CP008943.1 Protein Homology CDS 4070477 4070947 . - 0 ID=cds3567;Parent=gene3667;Dbxref=Genbank:WP_038401158.1;Name=WP_038401158.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401158.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4071337 4071537 . + . ID=gene3668;Name=DJ40_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18420;old_locus_tag=DJ40_3625 NZ_CP008943.1 Protein Homology CDS 4071337 4071537 . + 0 ID=cds3568;Parent=gene3668;Dbxref=Genbank:WP_038401836.1;Name=WP_038401836.1;gbkey=CDS;product=holin;protein_id=WP_038401836.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4071515 4071997 . + . ID=gene3669;Name=DJ40_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18425;old_locus_tag=DJ40_3626 NZ_CP008943.1 Protein Homology CDS 4071515 4071997 . + 0 ID=cds3569;Parent=gene3669;Dbxref=Genbank:WP_038401159.1;Name=WP_038401159.1;gbkey=CDS;product=lysozyme;protein_id=WP_038401159.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4071982 4072374 . + . ID=gene3670;Name=DJ40_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18430;old_locus_tag=DJ40_3627 NZ_CP008943.1 Protein Homology CDS 4071982 4072374 . + 0 ID=cds3570;Parent=gene3670;Dbxref=Genbank:WP_038401160.1;Name=WP_038401160.1;gbkey=CDS;product=exotoxin;protein_id=WP_038401160.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4072594 4073145 . + . ID=gene3671;Name=DJ40_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18435;old_locus_tag=DJ40_3628 NZ_CP008943.1 Protein Homology CDS 4072594 4073145 . + 0 ID=cds3571;Parent=gene3671;Dbxref=Genbank:WP_038401162.1;Name=WP_038401162.1;gbkey=CDS;product=terminase;protein_id=WP_038401162.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4073169 4073528 . - . ID=gene3672;Name=DJ40_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18440;old_locus_tag=DJ40_3629 NZ_CP008943.1 Protein Homology CDS 4073169 4073528 . - 0 ID=cds3572;Parent=gene3672;Dbxref=Genbank:WP_012303808.1;Name=WP_012303808.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_012303808.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4073580 4073840 . - . ID=gene3673;Name=DJ40_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18445 NZ_CP008943.1 Protein Homology CDS 4073580 4073840 . - 0 ID=cds3573;Parent=gene3673;Dbxref=Genbank:WP_038401164.1;Name=WP_038401164.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401164.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4073984 4075600 . + . ID=gene3674;Name=DJ40_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18450;old_locus_tag=DJ40_3630 NZ_CP008943.1 Protein Homology CDS 4073984 4075600 . + 0 ID=cds3574;Parent=gene3674;Dbxref=Genbank:WP_038401165.1;Name=WP_038401165.1;gbkey=CDS;product=bacteriophage TerL protein;protein_id=WP_038401165.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4075600 4077072 . + . ID=gene3675;Name=DJ40_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18455;old_locus_tag=DJ40_3631 NZ_CP008943.1 Protein Homology CDS 4075600 4077072 . + 0 ID=cds3575;Parent=gene3675;Dbxref=Genbank:WP_038401168.1;Name=WP_038401168.1;gbkey=CDS;product=HI1409 family phage-associated protein;protein_id=WP_038401168.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4077032 4077685 . + . ID=gene3676;Name=DJ40_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18460;old_locus_tag=DJ40_3632 NZ_CP008943.1 Protein Homology CDS 4077032 4077685 . + 0 ID=cds3576;Parent=gene3676;Dbxref=Genbank:WP_038401170.1;Name=WP_038401170.1;gbkey=CDS;product=head morphogenesis protein;protein_id=WP_038401170.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4077689 4078915 . + . ID=gene3677;Name=DJ40_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18465;old_locus_tag=DJ40_3633 NZ_CP008943.1 Protein Homology CDS 4077689 4078915 . + 0 ID=cds3577;Parent=gene3677;Dbxref=Genbank:WP_038401173.1;Name=WP_038401173.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401173.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4078919 4079410 . + . ID=gene3678;Name=DJ40_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18470;old_locus_tag=DJ40_3634 NZ_CP008943.1 Protein Homology CDS 4078919 4079410 . + 0 ID=cds3578;Parent=gene3678;Dbxref=Genbank:WP_038401175.1;Name=WP_038401175.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401175.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4079423 4080367 . + . ID=gene3679;Name=DJ40_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18475;old_locus_tag=DJ40_3635 NZ_CP008943.1 Protein Homology CDS 4079423 4080367 . + 0 ID=cds3579;Parent=gene3679;Dbxref=Genbank:WP_038401177.1;Name=WP_038401177.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401177.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4080408 4080749 . + . ID=gene3680;Name=DJ40_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18480;old_locus_tag=DJ40_3636 NZ_CP008943.1 Protein Homology CDS 4080408 4080749 . + 0 ID=cds3580;Parent=gene3680;Dbxref=Genbank:WP_038401178.1;Name=WP_038401178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401178.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4080703 4081107 . + . ID=gene3681;Name=DJ40_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18485;old_locus_tag=DJ40_3637 NZ_CP008943.1 Protein Homology CDS 4080703 4081107 . + 0 ID=cds3581;Parent=gene3681;Dbxref=Genbank:WP_038401179.1;Name=WP_038401179.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401179.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4081104 4081598 . + . ID=gene3682;Name=DJ40_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18490;old_locus_tag=DJ40_3638 NZ_CP008943.1 Protein Homology CDS 4081104 4081598 . + 0 ID=cds3582;Parent=gene3682;Dbxref=Genbank:WP_038401181.1;Name=WP_038401181.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401181.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4081585 4081983 . + . ID=gene3683;Name=DJ40_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18495;old_locus_tag=DJ40_3639 NZ_CP008943.1 Protein Homology CDS 4081585 4081983 . + 0 ID=cds3583;Parent=gene3683;Dbxref=Genbank:WP_038401183.1;Name=WP_038401183.1;gbkey=CDS;product=head-tail adaptor;protein_id=WP_038401183.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4081949 4082512 . + . ID=gene3684;Name=DJ40_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18500;old_locus_tag=DJ40_3640 NZ_CP008943.1 Protein Homology CDS 4081949 4082512 . + 0 ID=cds3584;Parent=gene3684;Dbxref=Genbank:WP_038401185.1;Name=WP_038401185.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401185.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4082515 4083990 . + . ID=gene3685;Name=DJ40_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18505;old_locus_tag=DJ40_3641 NZ_CP008943.1 Protein Homology CDS 4082515 4083990 . + 0 ID=cds3585;Parent=gene3685;Dbxref=Genbank:WP_038401186.1;Name=WP_038401186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401186.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4084002 4084442 . + . ID=gene3686;Name=DJ40_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18510;old_locus_tag=DJ40_3642 NZ_CP008943.1 Protein Homology CDS 4084002 4084442 . + 0 ID=cds3586;Parent=gene3686;Dbxref=Genbank:WP_038401189.1;Name=WP_038401189.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401189.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4084453 4084851 . + . ID=gene3687;Name=DJ40_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18515;old_locus_tag=DJ40_3643 NZ_CP008943.1 Protein Homology CDS 4084453 4084851 . + 0 ID=cds3587;Parent=gene3687;Dbxref=Genbank:WP_038401192.1;Name=WP_038401192.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401192.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4084851 4085036 . + . ID=gene3688;Name=DJ40_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18520;old_locus_tag=DJ40_3644 NZ_CP008943.1 Protein Homology CDS 4084851 4085036 . + 0 ID=cds3588;Parent=gene3688;Dbxref=Genbank:WP_038401194.1;Name=WP_038401194.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_038401194.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4085029 4087047 . + . ID=gene3689;Name=DJ40_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18525;old_locus_tag=DJ40_3645 NZ_CP008943.1 Protein Homology CDS 4085029 4087047 . + 0 ID=cds3589;Parent=gene3689;Dbxref=Genbank:WP_038401195.1;Name=WP_038401195.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_038401195.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4087047 4087673 . + . ID=gene3690;Name=DJ40_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18530;old_locus_tag=DJ40_3646 NZ_CP008943.1 Protein Homology CDS 4087047 4087673 . + 0 ID=cds3590;Parent=gene3690;Dbxref=Genbank:WP_038401197.1;Name=WP_038401197.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401197.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4087670 4087975 . + . ID=gene3691;Name=DJ40_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18535;old_locus_tag=DJ40_3647 NZ_CP008943.1 Protein Homology CDS 4087670 4087975 . + 0 ID=cds3591;Parent=gene3691;Dbxref=Genbank:WP_038401199.1;Name=WP_038401199.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401199.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4087978 4089039 . + . ID=gene3692;Name=DJ40_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18540;old_locus_tag=DJ40_3648 NZ_CP008943.1 Protein Homology CDS 4087978 4089039 . + 0 ID=cds3592;Parent=gene3692;Dbxref=Genbank:WP_038401201.1;Name=WP_038401201.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4089040 4089378 . + . ID=gene3693;Name=DJ40_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18545;old_locus_tag=DJ40_3649 NZ_CP008943.1 Protein Homology CDS 4089040 4089378 . + 0 ID=cds3593;Parent=gene3693;Dbxref=Genbank:WP_038401203.1;Name=WP_038401203.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401203.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4089490 4089714 . + . ID=gene3694;Name=DJ40_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18550;old_locus_tag=DJ40_3650 NZ_CP008943.1 Protein Homology CDS 4089490 4089714 . + 0 ID=cds3594;Parent=gene3694;Dbxref=Genbank:WP_038401206.1;Name=WP_038401206.1;gbkey=CDS;product=addiction module antitoxin Axe;protein_id=WP_038401206.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4089711 4090085 . + . ID=gene3695;Name=DJ40_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18555;old_locus_tag=DJ40_3651 NZ_CP008943.1 Protein Homology CDS 4089711 4090085 . + 0 ID=cds3595;Parent=gene3695;Dbxref=Genbank:WP_025383660.1;Name=WP_025383660.1;gbkey=CDS;product=death-on-curing protein;protein_id=WP_025383660.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4090148 4090906 . + . ID=gene3696;Name=DJ40_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18560;old_locus_tag=DJ40_3652 NZ_CP008943.1 Protein Homology CDS 4090148 4090906 . + 0 ID=cds3596;Parent=gene3696;Dbxref=Genbank:WP_038401208.1;Name=WP_038401208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401208.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4090903 4091256 . + . ID=gene3697;Name=DJ40_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18565;old_locus_tag=DJ40_3653 NZ_CP008943.1 Protein Homology CDS 4090903 4091256 . + 0 ID=cds3597;Parent=gene3697;Dbxref=Genbank:WP_038401210.1;Name=WP_038401210.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401210.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4091257 4092444 . + . ID=gene3698;Name=DJ40_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18570;old_locus_tag=DJ40_3654 NZ_CP008943.1 Protein Homology CDS 4091257 4092444 . + 0 ID=cds3598;Parent=gene3698;Dbxref=Genbank:WP_038401211.1;Name=WP_038401211.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038401211.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4092444 4093118 . + . ID=gene3699;Name=DJ40_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18575;old_locus_tag=DJ40_3655 NZ_CP008943.1 Protein Homology CDS 4092444 4093118 . + 0 ID=cds3599;Parent=gene3699;Dbxref=Genbank:WP_038401213.1;Name=WP_038401213.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401213.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4093111 4094109 . + . ID=gene3700;Name=DJ40_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21935;old_locus_tag=DJ40_3656 NZ_CP008943.1 Protein Homology CDS 4093111 4094109 . + 0 ID=cds3600;Parent=gene3700;Dbxref=Genbank:WP_049862796.1;Name=WP_049862796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862796.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4093709 4094302 . + . ID=id303;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4094111 4094578 . + . ID=gene3701;Name=DJ40_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18590;old_locus_tag=DJ40_3657 NZ_CP008943.1 Protein Homology CDS 4094111 4094578 . + 0 ID=cds3601;Parent=gene3701;Dbxref=Genbank:WP_042592787.1;Name=WP_042592787.1;gbkey=CDS;product=tail assembly chaperone gp38;protein_id=WP_042592787.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4094596 4094740 . + . ID=id304;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4094750 4095028 . - . ID=gene3702;Name=DJ40_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18595;old_locus_tag=DJ40_3658 NZ_CP008943.1 Protein Homology CDS 4094750 4095028 . - 0 ID=cds3602;Parent=gene3702;Dbxref=Genbank:WP_012303833.1;Name=WP_012303833.1;gbkey=CDS;product=membrane protein;protein_id=WP_012303833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4095009 4095527 . - . ID=gene3703;Name=DJ40_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18600;old_locus_tag=DJ40_3659 NZ_CP008943.1 Protein Homology CDS 4095009 4095527 . - 0 ID=cds3603;Parent=gene3703;Dbxref=Genbank:WP_012303834.1;Name=WP_012303834.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303834.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4095975 4096814 . - . ID=gene3704;Name=DJ40_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18605;old_locus_tag=DJ40_3660 NZ_CP008943.1 Protein Homology CDS 4095975 4096814 . - 0 ID=cds3604;Parent=gene3704;Dbxref=Genbank:WP_002211566.1;Name=WP_002211566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4097022 4097909 . + . ID=gene3705;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=DJ40_RS18610;old_locus_tag=DJ40_3661 NZ_CP008943.1 Protein Homology CDS 4097022 4097909 . + 0 ID=cds3605;Parent=gene3705;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4098148 4098843 . + . ID=gene3706;Name=DJ40_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18615;old_locus_tag=DJ40_3662 NZ_CP008943.1 Protein Homology CDS 4098148 4098843 . + 0 ID=cds3606;Parent=gene3706;Dbxref=Genbank:WP_038401214.1;Name=WP_038401214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401214.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4098914 4099516 . + . ID=gene3707;Name=DJ40_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18620;old_locus_tag=DJ40_3663 NZ_CP008943.1 Protein Homology CDS 4098914 4099516 . + 0 ID=cds3607;Parent=gene3707;Dbxref=Genbank:WP_038401217.1;Name=WP_038401217.1;gbkey=CDS;product=tRNA adenosine deaminase;protein_id=WP_038401217.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4099643 4101103 . - . ID=gene3708;Name=DJ40_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18625;old_locus_tag=DJ40_3664 NZ_CP008943.1 Protein Homology CDS 4099643 4101103 . - 0 ID=cds3608;Parent=gene3708;Dbxref=Genbank:WP_002211562.1;Name=WP_002211562.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002211562.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4101419 4105309 . + . ID=gene3709;Name=DJ40_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18630;old_locus_tag=DJ40_3665 NZ_CP008943.1 Protein Homology CDS 4101419 4105309 . + 0 ID=cds3609;Parent=gene3709;Dbxref=Genbank:WP_038401220.1;Name=WP_038401220.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_038401220.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4105340 4105514 . + . ID=id305;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4105736 4106185 . - . ID=gene3710;Name=DJ40_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18635;old_locus_tag=DJ40_3666 NZ_CP008943.1 Protein Homology CDS 4105736 4106185 . - 0 ID=cds3610;Parent=gene3710;Dbxref=Genbank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4106637 4107197 . - . ID=gene3711;Name=DJ40_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18640;old_locus_tag=DJ40_3667 NZ_CP008943.1 Protein Homology CDS 4106637 4107197 . - 0 ID=cds3611;Parent=gene3711;Dbxref=Genbank:WP_011192821.1;Name=WP_011192821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192821.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4108227 4108436 . + . ID=gene3712;Name=DJ40_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18645 NZ_CP008943.1 Protein Homology CDS 4108227 4108436 . + 0 ID=cds3612;Parent=gene3712;Dbxref=Genbank:WP_042592896.1;Name=WP_042592896.1;gbkey=CDS;product=transposase;protein_id=WP_042592896.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4108276 4108990 . + . ID=id306;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4108375 4108882 . + . ID=gene3713;Name=DJ40_RS18650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS18650;pseudo=true NZ_CP008943.1 Protein Homology CDS 4108375 4108882 . + 0 ID=cds3613;Parent=gene3713;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4109101 4110537 . + . ID=gene3714;Name=DJ40_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18655;old_locus_tag=DJ40_3669 NZ_CP008943.1 Protein Homology CDS 4109101 4110537 . + 0 ID=cds3614;Parent=gene3714;Dbxref=Genbank:WP_011192820.1;Name=WP_011192820.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_011192820.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4110541 4111608 . + . ID=gene3715;Name=DJ40_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18660;old_locus_tag=DJ40_3670 NZ_CP008943.1 Protein Homology CDS 4110541 4111608 . + 0 ID=cds3615;Parent=gene3715;Dbxref=Genbank:WP_012303839.1;Name=WP_012303839.1;gbkey=CDS;product=membrane protein;protein_id=WP_012303839.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4111571 4112908 . + . ID=gene3716;Name=DJ40_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18665;old_locus_tag=DJ40_3671 NZ_CP008943.1 Protein Homology CDS 4111571 4112908 . + 0 ID=cds3616;Parent=gene3716;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4113068 4114690 . + . ID=gene3717;Name=DJ40_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18670;old_locus_tag=DJ40_3672 NZ_CP008943.1 Protein Homology CDS 4113068 4114690 . + 0 ID=cds3617;Parent=gene3717;Dbxref=Genbank:WP_038401223.1;Name=WP_038401223.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_038401223.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4114705 4115043 . + . ID=gene3718;Name=DJ40_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18675;old_locus_tag=DJ40_3673 NZ_CP008943.1 Protein Homology CDS 4114705 4115043 . + 0 ID=cds3618;Parent=gene3718;Dbxref=Genbank:WP_002231018.1;Name=WP_002231018.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002231018.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4115226 4116125 . - . ID=gene3719;Name=DJ40_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18680;old_locus_tag=DJ40_3674 NZ_CP008943.1 Protein Homology CDS 4115226 4116125 . - 0 ID=cds3619;Parent=gene3719;Dbxref=Genbank:WP_011192818.1;Name=WP_011192818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192818.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4116589 4117779 . - . ID=gene3720;Name=DJ40_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18685;old_locus_tag=DJ40_3675 NZ_CP008943.1 Protein Homology CDS 4116589 4117779 . - 0 ID=cds3620;Parent=gene3720;Dbxref=Genbank:WP_038401225.1;Name=WP_038401225.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=dihydropteridine reductase;protein_id=WP_038401225.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4118320 4119573 . + . ID=gene3721;Name=DJ40_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18690;old_locus_tag=DJ40_3676 NZ_CP008943.1 Protein Homology CDS 4118320 4119573 . + 0 ID=cds3621;Parent=gene3721;Dbxref=Genbank:WP_002211552.1;Name=WP_002211552.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4119725 4119907 . + . ID=gene3722;Name=DJ40_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18695 NZ_CP008943.1 Protein Homology CDS 4119725 4119907 . + 0 ID=cds3622;Parent=gene3722;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4120025 4120564 . + . ID=gene3723;Name=DJ40_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18700;old_locus_tag=DJ40_3677 NZ_CP008943.1 Protein Homology CDS 4120025 4120564 . + 0 ID=cds3623;Parent=gene3723;Dbxref=Genbank:WP_012104793.1;Name=WP_012104793.1;gbkey=CDS;product=attachment protein;protein_id=WP_012104793.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4120916 4122073 . + . ID=gene3724;Name=DJ40_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18705;old_locus_tag=DJ40_3679 NZ_CP008943.1 Protein Homology CDS 4120916 4122073 . + 0 ID=cds3624;Parent=gene3724;Dbxref=Genbank:WP_011192816.1;Name=WP_011192816.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid MFS transporter;protein_id=WP_011192816.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4122070 4123416 . - . ID=gene3725;Name=DJ40_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18710;old_locus_tag=DJ40_3678 NZ_CP008943.1 Protein Homology CDS 4122070 4123416 . - 0 ID=cds3625;Parent=gene3725;Dbxref=Genbank:WP_002264608.1;Name=WP_002264608.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_002264608.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4123558 4124232 . + . ID=gene3726;Name=DJ40_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18715;old_locus_tag=DJ40_3680 NZ_CP008943.1 Protein Homology CDS 4123558 4124232 . + 0 ID=cds3626;Parent=gene3726;Dbxref=Genbank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213310.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4124223 4125245 . + . ID=gene3727;Name=DJ40_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18720;old_locus_tag=DJ40_3681 NZ_CP008943.1 Protein Homology CDS 4124223 4125245 . + 0 ID=cds3627;Parent=gene3727;Dbxref=Genbank:WP_002213308.1;Name=WP_002213308.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002213308.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4125344 4126147 . - . ID=gene3728;Name=DJ40_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18725;old_locus_tag=DJ40_3682 NZ_CP008943.1 Protein Homology CDS 4125344 4126147 . - 0 ID=cds3628;Parent=gene3728;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4126266 4127039 . + . ID=gene3729;Name=DJ40_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18730;old_locus_tag=DJ40_3683 NZ_CP008943.1 Protein Homology CDS 4126266 4127039 . + 0 ID=cds3629;Parent=gene3729;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4127195 4127689 . + . ID=gene3730;Name=DJ40_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18735;old_locus_tag=DJ40_3684 NZ_CP008943.1 Protein Homology CDS 4127195 4127689 . + 0 ID=cds3630;Parent=gene3730;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4127743 4128972 . + . ID=gene3731;Name=DJ40_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18740;old_locus_tag=DJ40_3685 NZ_CP008943.1 Protein Homology CDS 4127743 4128972 . + 0 ID=cds3631;Parent=gene3731;Dbxref=Genbank:WP_011192814.1;Name=WP_011192814.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_011192814.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4129003 4129389 . + . ID=gene3732;Name=DJ40_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18745;old_locus_tag=DJ40_3686 NZ_CP008943.1 Protein Homology CDS 4129003 4129389 . + 0 ID=cds3632;Parent=gene3732;Dbxref=Genbank:WP_002209835.1;Name=WP_002209835.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4129659 4129982 . + . ID=gene3733;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=DJ40_RS18750;old_locus_tag=DJ40_3687 NZ_CP008943.1 Protein Homology CDS 4129659 4129982 . + 0 ID=cds3633;Parent=gene3733;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4130093 4130617 . + . ID=gene3734;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=DJ40_RS18755;old_locus_tag=DJ40_3688 NZ_CP008943.1 Protein Homology CDS 4130093 4130617 . + 0 ID=cds3634;Parent=gene3734;Dbxref=Genbank:WP_002209833.1;Name=WP_002209833.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_002209833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4130860 4132794 . + . ID=gene3735;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=DJ40_RS18760;old_locus_tag=DJ40_3689 NZ_CP008943.1 Protein Homology CDS 4130860 4132794 . + 0 ID=cds3635;Parent=gene3735;Dbxref=Genbank:WP_012104797.1;Name=WP_012104797.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_012104797.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4132797 4133132 . + . ID=gene3736;Name=DJ40_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18765;old_locus_tag=DJ40_3690 NZ_CP008943.1 Protein Homology CDS 4132797 4133132 . + 0 ID=cds3636;Parent=gene3736;Dbxref=Genbank:WP_002209831.1;Name=WP_002209831.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002209831.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4133162 4133362 . + . ID=gene3737;Name=DJ40_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18770;old_locus_tag=DJ40_3691 NZ_CP008943.1 Protein Homology CDS 4133162 4133362 . + 0 ID=cds3637;Parent=gene3737;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4133502 4134800 . + . ID=gene3738;Name=DJ40_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18775;old_locus_tag=DJ40_3692 NZ_CP008943.1 Protein Homology CDS 4133502 4134800 . + 0 ID=cds3638;Parent=gene3738;Dbxref=Genbank:WP_011192810.1;Name=WP_011192810.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_011192810.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4134879 4135832 . + . ID=gene3739;Name=DJ40_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18780;old_locus_tag=DJ40_3693 NZ_CP008943.1 Protein Homology CDS 4134879 4135832 . + 0 ID=cds3639;Parent=gene3739;Dbxref=Genbank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_002209828.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4135868 4136038 . + . ID=id307;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 4136100 4136873 . + . ID=id308;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4136102 4139617 . - . ID=gene3740;Name=DJ40_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18785;old_locus_tag=DJ40_3694 NZ_CP008943.1 Protein Homology CDS 4136102 4139617 . - 0 ID=cds3640;Parent=gene3740;Dbxref=Genbank:WP_038401230.1;Name=WP_038401230.1;gbkey=CDS;product=pertactin;protein_id=WP_038401230.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4137687 4137836 . + . ID=id309;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 4137849 4137998 . + . ID=id310;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 4140222 4140995 . + . ID=id311;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4140224 4142734 . - . ID=gene3741;Name=DJ40_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18790;old_locus_tag=DJ40_3695 NZ_CP008943.1 Protein Homology CDS 4140224 4142734 . - 0 ID=cds3641;Parent=gene3741;Dbxref=Genbank:WP_038401232.1;Name=WP_038401232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401232.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4143018 4143275 . - . ID=gene3742;Name=DJ40_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18795 NZ_CP008943.1 Protein Homology CDS 4143018 4143275 . - 0 ID=cds3642;Parent=gene3742;Dbxref=Genbank:WP_011192806.1;Name=WP_011192806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192806.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4143450 4145870 . + . ID=gene3743;Name=DJ40_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18800;old_locus_tag=DJ40_3696 NZ_CP008943.1 Protein Homology CDS 4143450 4145870 . + 0 ID=cds3643;Parent=gene3743;Dbxref=Genbank:WP_032466564.1;Name=WP_032466564.1;gbkey=CDS;product=exotoxin;protein_id=WP_032466564.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4146198 4146626 . + . ID=gene3744;Name=DJ40_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18805;old_locus_tag=DJ40_3697 NZ_CP008943.1 Protein Homology CDS 4146198 4146626 . + 0 ID=cds3644;Parent=gene3744;Dbxref=Genbank:WP_011192804.1;Name=WP_011192804.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_011192804.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4146888 4148084 . + . ID=gene3745;Name=DJ40_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18810;old_locus_tag=DJ40_3698 NZ_CP008943.1 Protein Homology CDS 4146888 4148084 . + 0 ID=cds3645;Parent=gene3745;Dbxref=Genbank:WP_002209820.1;Name=WP_002209820.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002209820.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4148238 4148987 . + . ID=gene3746;Name=DJ40_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18815;old_locus_tag=DJ40_3699 NZ_CP008943.1 Protein Homology CDS 4148238 4148987 . + 0 ID=cds3646;Parent=gene3746;Dbxref=Genbank:WP_011192803.1;Name=WP_011192803.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_011192803.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4148977 4150113 . + . ID=gene3747;Name=DJ40_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18820;old_locus_tag=DJ40_3700 NZ_CP008943.1 Protein Homology CDS 4148977 4150113 . + 0 ID=cds3647;Parent=gene3747;Dbxref=Genbank:WP_038401233.1;Name=WP_038401233.1;gbkey=CDS;product=cytoskeletal protein RodZ;protein_id=WP_038401233.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4150217 4151344 . + . ID=gene3748;Name=DJ40_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18825;old_locus_tag=DJ40_3701 NZ_CP008943.1 Protein Homology CDS 4150217 4151344 . + 0 ID=cds3648;Parent=gene3748;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4151553 4152827 . + . ID=gene3749;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=DJ40_RS18830;old_locus_tag=DJ40_3702 NZ_CP008943.1 Protein Homology CDS 4151553 4152827 . + 0 ID=cds3649;Parent=gene3749;Dbxref=Genbank:WP_032466563.1;Name=WP_032466563.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=WP_032466563.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4152841 4153476 . + . ID=gene3750;Name=DJ40_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18835;old_locus_tag=DJ40_3703 NZ_CP008943.1 Protein Homology CDS 4152841 4153476 . + 0 ID=cds3650;Parent=gene3750;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4153488 4154669 . + . ID=gene3751;Name=DJ40_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18840;old_locus_tag=DJ40_3704 NZ_CP008943.1 Protein Homology CDS 4153488 4154669 . + 0 ID=cds3651;Parent=gene3751;Dbxref=Genbank:WP_038401236.1;Name=WP_038401236.1;gbkey=CDS;product=membrane biogenesis protein;protein_id=WP_038401236.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4154817 4156304 . + . ID=gene3752;Name=DJ40_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18845;old_locus_tag=DJ40_3705 NZ_CP008943.1 Protein Homology CDS 4154817 4156304 . + 0 ID=cds3652;Parent=gene3752;Dbxref=Genbank:WP_002209813.1;Name=WP_002209813.1;gbkey=CDS;product=GTPase Der;protein_id=WP_002209813.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4156651 4157607 . + . ID=gene3753;Name=DJ40_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18850;old_locus_tag=DJ40_3706 NZ_CP008943.1 Protein Homology CDS 4156651 4157607 . + 0 ID=cds3653;Parent=gene3753;Dbxref=Genbank:WP_038401238.1;Name=WP_038401238.1;gbkey=CDS;product=transporter;protein_id=WP_038401238.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4157656 4157880 . + . ID=gene3754;Name=DJ40_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18855;old_locus_tag=DJ40_3707 NZ_CP008943.1 Protein Homology CDS 4157656 4157880 . + 0 ID=cds3654;Parent=gene3754;Dbxref=Genbank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209811.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4158005 4159384 . - . ID=gene3755;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=DJ40_RS18860;old_locus_tag=DJ40_3708 NZ_CP008943.1 Protein Homology CDS 4158005 4159384 . - 0 ID=cds3655;Parent=gene3755;Dbxref=Genbank:WP_011192797.1;Name=WP_011192797.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_011192797.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4159554 4161017 . + . ID=gene3756;Name=DJ40_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18865;old_locus_tag=DJ40_3709 NZ_CP008943.1 Protein Homology CDS 4159554 4161017 . + 0 ID=cds3656;Parent=gene3756;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4161089 4161214 . - . ID=gene3757;Name=DJ40_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18870 NZ_CP008943.1 Protein Homology CDS 4161089 4161214 . - 0 ID=cds3657;Parent=gene3757;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4161197 4162774 . + . ID=gene3758;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=DJ40_RS18875;old_locus_tag=DJ40_3710 NZ_CP008943.1 Protein Homology CDS 4161197 4162774 . + 0 ID=cds3658;Parent=gene3758;Dbxref=Genbank:WP_011192796.1;Name=WP_011192796.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_011192796.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4162845 4162975 . + . ID=id312;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4163059 4163538 . - . ID=gene3759;Name=DJ40_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18880;old_locus_tag=DJ40_3711 NZ_CP008943.1 Protein Homology CDS 4163059 4163538 . - 0 ID=cds3659;Parent=gene3759;Dbxref=Genbank:WP_011192795.1;Name=WP_011192795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192795.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4163562 4163957 . - . ID=gene3760;Name=DJ40_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18885;old_locus_tag=DJ40_3712 NZ_CP008943.1 Protein Homology CDS 4163562 4163957 . - 0 ID=cds3660;Parent=gene3760;Dbxref=Genbank:WP_032466560.1;Name=WP_032466560.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466560.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4164019 4164414 . - . ID=gene3761;Name=DJ40_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18890;old_locus_tag=DJ40_3713 NZ_CP008943.1 Protein Homology CDS 4164019 4164414 . - 0 ID=cds3661;Parent=gene3761;Dbxref=Genbank:WP_032466559.1;Name=WP_032466559.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466559.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4164478 4164873 . - . ID=gene3762;Name=DJ40_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18895;old_locus_tag=DJ40_3714 NZ_CP008943.1 Protein Homology CDS 4164478 4164873 . - 0 ID=cds3662;Parent=gene3762;Dbxref=Genbank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216980.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4164870 4165751 . - . ID=gene3763;Name=DJ40_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18900 NZ_CP008943.1 Protein Homology CDS 4164870 4165751 . - 0 ID=cds3663;Parent=gene3763;Dbxref=Genbank:WP_042592898.1;Name=WP_042592898.1;gbkey=CDS;product=membrane protein;protein_id=WP_042592898.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4165849 4166316 . - . ID=gene3764;Name=DJ40_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18910;old_locus_tag=DJ40_3716 NZ_CP008943.1 Protein Homology CDS 4165849 4166316 . - 0 ID=cds3664;Parent=gene3764;Dbxref=Genbank:WP_032466558.1;Name=WP_032466558.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466558.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4166838 4167638 . + . ID=gene3765;Name=DJ40_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18915;old_locus_tag=DJ40_3717 NZ_CP008943.1 Protein Homology CDS 4166838 4167638 . + 0 ID=cds3665;Parent=gene3765;Dbxref=Genbank:WP_012104816.1;Name=WP_012104816.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_012104816.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4167666 4168586 . - . ID=gene3766;Name=DJ40_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18920;old_locus_tag=DJ40_3718 NZ_CP008943.1 Protein Homology CDS 4167666 4168586 . - 0 ID=cds3666;Parent=gene3766;Dbxref=Genbank:WP_038401241.1;Name=WP_038401241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401241.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4168817 4169326 . + . ID=gene3767;Name=DJ40_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18925;old_locus_tag=DJ40_3719 NZ_CP008943.1 Protein Homology CDS 4168817 4169326 . + 0 ID=cds3667;Parent=gene3767;Dbxref=Genbank:WP_002209800.1;Name=WP_002209800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209800.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4169613 4170503 . - . ID=gene3768;Name=DJ40_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18930;old_locus_tag=DJ40_3720 NZ_CP008943.1 Protein Homology CDS 4169613 4170503 . - 0 ID=cds3668;Parent=gene3768;Dbxref=Genbank:WP_011192787.1;Name=WP_011192787.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_011192787.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4171140 4172534 . - . ID=gene3769;Name=DJ40_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18935;old_locus_tag=DJ40_3721 NZ_CP008943.1 Protein Homology CDS 4171140 4172534 . - 0 ID=cds3669;Parent=gene3769;Dbxref=Genbank:WP_002209798.1;Name=WP_002209798.1;gbkey=CDS;product=protease;protein_id=WP_002209798.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4172832 4173170 . - . ID=gene3770;Name=DJ40_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18940;old_locus_tag=DJ40_3722 NZ_CP008943.1 Protein Homology CDS 4172832 4173170 . - 0 ID=cds3670;Parent=gene3770;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4173307 4174026 . - . ID=gene3771;Name=DJ40_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18945;old_locus_tag=DJ40_3723 NZ_CP008943.1 Protein Homology CDS 4173307 4174026 . - 0 ID=cds3671;Parent=gene3771;Dbxref=Genbank:WP_011192786.1;Name=WP_011192786.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_011192786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4174036 4175418 . - . ID=gene3772;Name=DJ40_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18950;old_locus_tag=DJ40_3724 NZ_CP008943.1 Protein Homology CDS 4174036 4175418 . - 0 ID=cds3672;Parent=gene3772;Dbxref=Genbank:WP_038401849.1;Name=WP_038401849.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_038401849.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4175452 4176849 . - . ID=gene3773;Name=DJ40_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18955;old_locus_tag=DJ40_3725 NZ_CP008943.1 Protein Homology CDS 4175452 4176849 . - 0 ID=cds3673;Parent=gene3773;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4176883 4179957 . - . ID=gene3774;Name=DJ40_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18960;old_locus_tag=DJ40_3726 NZ_CP008943.1 Protein Homology CDS 4176883 4179957 . - 0 ID=cds3674;Parent=gene3774;Dbxref=Genbank:WP_011192783.1;Name=WP_011192783.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_011192783.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4179954 4183112 . - . ID=gene3775;Name=DJ40_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18965;old_locus_tag=DJ40_3727 NZ_CP008943.1 Protein Homology CDS 4179954 4183112 . - 0 ID=cds3675;Parent=gene3775;Dbxref=Genbank:WP_038401244.1;Name=WP_038401244.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug transporter;protein_id=WP_038401244.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4183112 4184446 . - . ID=gene3776;Name=DJ40_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18970;old_locus_tag=DJ40_3728 NZ_CP008943.1 Protein Homology CDS 4183112 4184446 . - 0 ID=cds3676;Parent=gene3776;Dbxref=Genbank:WP_038401246.1;Name=WP_038401246.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_038401246.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4184834 4185919 . - . ID=gene3777;Name=DJ40_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18975;old_locus_tag=DJ40_3729 NZ_CP008943.1 Protein Homology CDS 4184834 4185919 . - 0 ID=cds3677;Parent=gene3777;Dbxref=Genbank:WP_038401249.1;Name=WP_038401249.1;gbkey=CDS;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=WP_038401249.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4186302 4187807 . - . ID=gene3778;Name=DJ40_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18980;old_locus_tag=DJ40_3730 NZ_CP008943.1 Protein Homology CDS 4186302 4187807 . - 0 ID=cds3678;Parent=gene3778;Dbxref=Genbank:WP_038401251.1;Name=WP_038401251.1;gbkey=CDS;product=decarboxylase;protein_id=WP_038401251.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4187989 4189278 . + . ID=gene3779;Name=DJ40_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18985;old_locus_tag=DJ40_3731 NZ_CP008943.1 Protein Homology CDS 4187989 4189278 . + 0 ID=cds3679;Parent=gene3779;Dbxref=Genbank:WP_012104823.1;Name=WP_012104823.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_012104823.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4189331 4190359 . + . ID=gene3780;Name=DJ40_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18990;old_locus_tag=DJ40_3732 NZ_CP008943.1 Protein Homology CDS 4189331 4190359 . + 0 ID=cds3680;Parent=gene3780;Dbxref=Genbank:WP_038401253.1;Name=WP_038401253.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_038401253.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4190406 4191671 . + . ID=gene3781;Name=DJ40_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS18995;old_locus_tag=DJ40_3733 NZ_CP008943.1 Protein Homology CDS 4190406 4191671 . + 0 ID=cds3681;Parent=gene3781;Dbxref=Genbank:WP_038401255.1;Name=WP_038401255.1;gbkey=CDS;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_038401255.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4191733 4192581 . + . ID=gene3782;Name=DJ40_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19000;old_locus_tag=DJ40_3734 NZ_CP008943.1 Protein Homology CDS 4191733 4192581 . + 0 ID=cds3682;Parent=gene3782;Dbxref=Genbank:WP_002209786.1;Name=WP_002209786.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4192853 4194205 . - . ID=gene3783;Name=DJ40_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19005;old_locus_tag=DJ40_3736 NZ_CP008943.1 Protein Homology CDS 4192853 4194205 . - 0 ID=cds3683;Parent=gene3783;Dbxref=Genbank:WP_012104828.1;Name=WP_012104828.1;gbkey=CDS;product=chaperone;protein_id=WP_012104828.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4194345 4195820 . - . ID=gene3784;Name=DJ40_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19010;old_locus_tag=DJ40_3737 NZ_CP008943.1 Protein Homology CDS 4194345 4195820 . - 0 ID=cds3684;Parent=gene3784;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4195872 4196060 . - . ID=gene3785;Name=DJ40_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19015 NZ_CP008943.1 Protein Homology CDS 4195872 4196060 . - 0 ID=cds3685;Parent=gene3785;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4196249 4197808 . - . ID=gene3786;Name=DJ40_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19020;old_locus_tag=DJ40_3738 NZ_CP008943.1 Protein Homology CDS 4196249 4197808 . - 0 ID=cds3686;Parent=gene3786;Dbxref=Genbank:WP_038401257.1;Name=WP_038401257.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_038401257.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4197819 4199882 . - . ID=gene3787;Name=DJ40_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19025;old_locus_tag=DJ40_3739 NZ_CP008943.1 Protein Homology CDS 4197819 4199882 . - 0 ID=cds3687;Parent=gene3787;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4200153 4202384 . + . ID=gene3788;Name=DJ40_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19030;old_locus_tag=DJ40_3740 NZ_CP008943.1 Protein Homology CDS 4200153 4202384 . + 0 ID=cds3688;Parent=gene3788;Dbxref=Genbank:WP_011192774.1;Name=WP_011192774.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_011192774.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4202444 4204096 . + . ID=gene3789;Name=DJ40_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19035;old_locus_tag=DJ40_3741 NZ_CP008943.1 Protein Homology CDS 4202444 4204096 . + 0 ID=cds3689;Parent=gene3789;Dbxref=Genbank:WP_033849705.1;Name=WP_033849705.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_033849705.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4204124 4204936 . + . ID=gene3790;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=DJ40_RS19040;old_locus_tag=DJ40_3742 NZ_CP008943.1 Protein Homology CDS 4204124 4204936 . + 0 ID=cds3690;Parent=gene3790;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4205607 4206329 . + . ID=gene3791;Name=DJ40_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19045 NZ_CP008943.1 Protein Homology CDS 4205607 4206329 . + 0 ID=cds3691;Parent=gene3791;Dbxref=Genbank:WP_032466693.1;Name=WP_032466693.1;gbkey=CDS;product=N-methylation of lysine residues in flagellin;protein_id=WP_032466693.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4206423 4206968 . - . ID=gene3792;Name=DJ40_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19050;old_locus_tag=DJ40_3744 NZ_CP008943.1 Protein Homology CDS 4206423 4206968 . - 0 ID=cds3692;Parent=gene3792;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4207197 4207835 . - . ID=gene3793;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=DJ40_RS19055;old_locus_tag=DJ40_3745 NZ_CP008943.1 Protein Homology CDS 4207197 4207835 . - 0 ID=cds3693;Parent=gene3793;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4207950 4208993 . - . ID=gene3794;Name=DJ40_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19060;old_locus_tag=DJ40_3746 NZ_CP008943.1 Protein Homology CDS 4207950 4208993 . - 0 ID=cds3694;Parent=gene3794;Dbxref=Genbank:WP_011192770.1;Name=WP_011192770.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_011192770.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4209390 4210016 . + . ID=gene3795;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=DJ40_RS19065;old_locus_tag=DJ40_3747 NZ_CP008943.1 Protein Homology CDS 4209390 4210016 . + 0 ID=cds3695;Parent=gene3795;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4210173 4211459 . + . ID=gene3796;Name=DJ40_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19070;old_locus_tag=DJ40_3748 NZ_CP008943.1 Protein Homology CDS 4210173 4211459 . + 0 ID=cds3696;Parent=gene3796;Dbxref=Genbank:WP_011192769.1;Name=WP_011192769.1;gbkey=CDS;product=uracil transporter;protein_id=WP_011192769.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4211718 4212425 . + . ID=gene3797;Name=DJ40_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19075;old_locus_tag=DJ40_3749 NZ_CP008943.1 Protein Homology CDS 4211718 4212425 . + 0 ID=cds3697;Parent=gene3797;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4212638 4212994 . - . ID=gene3798;Name=DJ40_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19080;old_locus_tag=DJ40_3750 NZ_CP008943.1 Protein Homology CDS 4212638 4212994 . - 0 ID=cds3698;Parent=gene3798;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4213101 4214585 . - . ID=gene3799;Name=DJ40_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19085;old_locus_tag=DJ40_3751 NZ_CP008943.1 Protein Homology CDS 4213101 4214585 . - 0 ID=cds3699;Parent=gene3799;Dbxref=Genbank:WP_011192768.1;Name=WP_011192768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192768.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4214916 4215980 . + . ID=gene3800;Name=DJ40_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19090;old_locus_tag=DJ40_3752 NZ_CP008943.1 Protein Homology CDS 4214916 4215980 . + 0 ID=cds3700;Parent=gene3800;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4216069 4216242 . - . ID=gene3801;Name=DJ40_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19095 NZ_CP008943.1 Protein Homology CDS 4216069 4216242 . - 0 ID=cds3701;Parent=gene3801;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4216580 4217275 . + . ID=gene3802;Name=DJ40_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19100;old_locus_tag=DJ40_3753 NZ_CP008943.1 Protein Homology CDS 4216580 4217275 . + 0 ID=cds3702;Parent=gene3802;Dbxref=Genbank:WP_011192767.1;Name=WP_011192767.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192767.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4217279 4217698 . + . ID=gene3803;Name=DJ40_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19105;old_locus_tag=DJ40_3754 NZ_CP008943.1 Protein Homology CDS 4217279 4217698 . + 0 ID=cds3703;Parent=gene3803;Dbxref=Genbank:WP_025384480.1;Name=WP_025384480.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025384480.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4217942 4218412 . - . ID=gene3804;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=DJ40_RS19110;old_locus_tag=DJ40_3755 NZ_CP008943.1 Protein Homology CDS 4217942 4218412 . - 0 ID=cds3704;Parent=gene3804;Dbxref=Genbank:WP_038401259.1;Name=WP_038401259.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_038401259.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4218415 4218984 . - . ID=gene3805;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=DJ40_RS19115;old_locus_tag=DJ40_3756 NZ_CP008943.1 Protein Homology CDS 4218415 4218984 . - 0 ID=cds3705;Parent=gene3805;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4219149 4220030 . + . ID=gene3806;Name=DJ40_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19120;old_locus_tag=DJ40_3757 NZ_CP008943.1 Protein Homology CDS 4219149 4220030 . + 0 ID=cds3706;Parent=gene3806;Dbxref=Genbank:WP_002227834.1;Name=WP_002227834.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4220048 4221106 . + . ID=gene3807;Name=DJ40_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19125;old_locus_tag=DJ40_3758 NZ_CP008943.1 Protein Homology CDS 4220048 4221106 . + 0 ID=cds3707;Parent=gene3807;Dbxref=Genbank:WP_038401262.1;Name=WP_038401262.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_038401262.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4221177 4221890 . + . ID=gene3808;Name=DJ40_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19130;old_locus_tag=DJ40_3759 NZ_CP008943.1 Protein Homology CDS 4221177 4221890 . + 0 ID=cds3708;Parent=gene3808;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4222110 4222976 . + . ID=gene3809;Name=DJ40_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19135;old_locus_tag=DJ40_3761 NZ_CP008943.1 Protein Homology CDS 4222110 4222976 . + 0 ID=cds3709;Parent=gene3809;Dbxref=Genbank:WP_038401264.1;Name=WP_038401264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401264.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4223070 4223522 . + . ID=gene3810;Name=DJ40_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19140;old_locus_tag=DJ40_3762 NZ_CP008943.1 Protein Homology CDS 4223070 4223522 . + 0 ID=cds3710;Parent=gene3810;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4223524 4225575 . + . ID=gene3811;Name=DJ40_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19145;old_locus_tag=DJ40_3763 NZ_CP008943.1 Protein Homology CDS 4223524 4225575 . + 0 ID=cds3711;Parent=gene3811;Dbxref=Genbank:WP_012303875.1;Name=WP_012303875.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=methionine tRNA cytidine acetyltransferase;protein_id=WP_012303875.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4225829 4226023 . - . ID=gene3812;Name=DJ40_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19150;old_locus_tag=DJ40_3764 NZ_CP008943.1 Protein Homology CDS 4225829 4226023 . - 0 ID=cds3712;Parent=gene3812;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4226091 4226768 . - . ID=gene3813;Name=DJ40_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19155;old_locus_tag=DJ40_3765 NZ_CP008943.1 Protein Homology CDS 4226091 4226768 . - 0 ID=cds3713;Parent=gene3813;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4226765 4227892 . - . ID=gene3814;Name=DJ40_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19160;old_locus_tag=DJ40_3766 NZ_CP008943.1 Protein Homology CDS 4226765 4227892 . - 0 ID=cds3714;Parent=gene3814;Dbxref=Genbank:WP_002208549.1;Name=WP_002208549.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4227894 4228292 . - . ID=gene3815;Name=DJ40_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19165;old_locus_tag=DJ40_3767 NZ_CP008943.1 Protein Homology CDS 4227894 4228292 . - 0 ID=cds3715;Parent=gene3815;Dbxref=Genbank:WP_012303877.1;Name=WP_012303877.1;gbkey=CDS;product=reductase;protein_id=WP_012303877.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4228452 4228925 . - . ID=gene3816;Name=DJ40_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19170;old_locus_tag=DJ40_3768 NZ_CP008943.1 Protein Homology CDS 4228452 4228925 . - 0 ID=cds3716;Parent=gene3816;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4229236 4230324 . + . ID=gene3817;Name=DJ40_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19175;old_locus_tag=DJ40_3769 NZ_CP008943.1 Protein Homology CDS 4229236 4230324 . + 0 ID=cds3717;Parent=gene3817;Dbxref=Genbank:WP_011192761.1;Name=WP_011192761.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_011192761.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4230419 4232188 . + . ID=gene3818;Name=DJ40_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19180;old_locus_tag=DJ40_3770 NZ_CP008943.1 Protein Homology CDS 4230419 4232188 . + 0 ID=cds3718;Parent=gene3818;Dbxref=Genbank:WP_002231049.1;Name=WP_002231049.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002231049.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4232181 4233251 . + . ID=gene3819;Name=DJ40_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19185;old_locus_tag=DJ40_3771 NZ_CP008943.1 Protein Homology CDS 4232181 4233251 . + 0 ID=cds3719;Parent=gene3819;Dbxref=Genbank:WP_011192760.1;Name=WP_011192760.1;gbkey=CDS;product=lipase;protein_id=WP_011192760.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4233732 4235402 . + . ID=gene3820;Name=DJ40_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19190;old_locus_tag=DJ40_3772 NZ_CP008943.1 Protein Homology CDS 4233732 4235402 . + 0 ID=cds3720;Parent=gene3820;Dbxref=Genbank:WP_038401854.1;Name=WP_038401854.1;gbkey=CDS;product=sulfatase;protein_id=WP_038401854.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4235459 4236634 . + . ID=gene3821;Name=DJ40_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19195;old_locus_tag=DJ40_3773 NZ_CP008943.1 Protein Homology CDS 4235459 4236634 . + 0 ID=cds3721;Parent=gene3821;Dbxref=Genbank:WP_011192759.1;Name=WP_011192759.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_011192759.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4237381 4237929 . - . ID=gene3822;Name=DJ40_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19200;old_locus_tag=DJ40_3774 NZ_CP008943.1 Protein Homology CDS 4237381 4237929 . - 0 ID=cds3722;Parent=gene3822;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4238218 4238802 . - . ID=gene3823;Name=DJ40_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19205;old_locus_tag=DJ40_3775 NZ_CP008943.1 Protein Homology CDS 4238218 4238802 . - 0 ID=cds3723;Parent=gene3823;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4239033 4242164 . - . ID=gene3824;Name=DJ40_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19210;old_locus_tag=DJ40_3776 NZ_CP008943.1 Protein Homology CDS 4239033 4242164 . - 0 ID=cds3724;Parent=gene3824;Dbxref=Genbank:WP_038401267.1;Name=WP_038401267.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_038401267.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4242579 4242857 . + . ID=gene3825;Name=DJ40_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19215;old_locus_tag=DJ40_3777 NZ_CP008943.1 Protein Homology CDS 4242579 4242857 . + 0 ID=cds3725;Parent=gene3825;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4242870 4243499 . - . ID=gene3826;Name=DJ40_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19220;old_locus_tag=DJ40_3778 NZ_CP008943.1 Protein Homology CDS 4242870 4243499 . - 0 ID=cds3726;Parent=gene3826;Dbxref=Genbank:WP_002208537.1;Name=WP_002208537.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208537.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4244332 4244835 . + . ID=gene3827;Name=DJ40_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19225;old_locus_tag=DJ40_3779 NZ_CP008943.1 Protein Homology CDS 4244332 4244835 . + 0 ID=cds3727;Parent=gene3827;Dbxref=Genbank:WP_002231048.1;Name=WP_002231048.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002231048.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4244825 4245091 . + . ID=gene3828;Name=DJ40_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19230;old_locus_tag=DJ40_3780 NZ_CP008943.1 Protein Homology CDS 4244825 4245091 . + 0 ID=cds3728;Parent=gene3828;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4245088 4247580 . + . ID=gene3829;Name=DJ40_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19235;old_locus_tag=DJ40_3781 NZ_CP008943.1 Protein Homology CDS 4245088 4247580 . + 0 ID=cds3729;Parent=gene3829;Dbxref=Genbank:WP_011171900.1;Name=WP_011171900.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_011171900.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4247646 4248113 . + . ID=gene3830;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=DJ40_RS19240;old_locus_tag=DJ40_3782 NZ_CP008943.1 Protein Homology CDS 4247646 4248113 . + 0 ID=cds3730;Parent=gene3830;Dbxref=Genbank:WP_002208532.1;Name=WP_002208532.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_002208532.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4248141 4248740 . + . ID=gene3831;Name=DJ40_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19245;old_locus_tag=DJ40_3783 NZ_CP008943.1 Protein Homology CDS 4248141 4248740 . + 0 ID=cds3731;Parent=gene3831;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4248924 4249520 . + . ID=gene3832;Name=DJ40_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19250;old_locus_tag=DJ40_3784 NZ_CP008943.1 Protein Homology CDS 4248924 4249520 . + 0 ID=cds3732;Parent=gene3832;Dbxref=Genbank:WP_038401270.1;Name=WP_038401270.1;gbkey=CDS;product=GDP-mannose pyrophosphatase;protein_id=WP_038401270.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4249716 4251995 . + . ID=gene3833;Name=DJ40_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19255;old_locus_tag=DJ40_3785 NZ_CP008943.1 Protein Homology CDS 4249716 4251995 . + 0 ID=cds3733;Parent=gene3833;Dbxref=Genbank:WP_038401273.1;Name=WP_038401273.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=malic enzyme;protein_id=WP_038401273.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4252163 4252621 . - . ID=gene3834;Name=DJ40_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19260;old_locus_tag=DJ40_3786 NZ_CP008943.1 Protein Homology CDS 4252163 4252621 . - 0 ID=cds3734;Parent=gene3834;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4252621 4253550 . - . ID=gene3835;Name=DJ40_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19265;old_locus_tag=DJ40_3787 NZ_CP008943.1 Protein Homology CDS 4252621 4253550 . - 0 ID=cds3735;Parent=gene3835;Dbxref=Genbank:WP_038401275.1;Name=WP_038401275.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_038401275.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4253833 4254258 . + . ID=gene3836;Name=DJ40_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19270;old_locus_tag=DJ40_3788 NZ_CP008943.1 Protein Homology CDS 4253833 4254258 . + 0 ID=cds3736;Parent=gene3836;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4254439 4254623 . - . ID=gene3837;Name=DJ40_RS19275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS19275;pseudo=true NZ_CP008943.1 Protein Homology CDS 4254439 4254623 . - 0 ID=cds3737;Parent=gene3837;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4254729 4255145 . + . ID=gene3838;Name=DJ40_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19280;old_locus_tag=DJ40_3789 NZ_CP008943.1 Protein Homology CDS 4254729 4255145 . + 0 ID=cds3738;Parent=gene3838;Dbxref=Genbank:WP_011192753.1;Name=WP_011192753.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192753.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4255237 4257516 . - . ID=gene3839;Name=DJ40_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19285;old_locus_tag=DJ40_3790 NZ_CP008943.1 Protein Homology CDS 4255237 4257516 . - 0 ID=cds3739;Parent=gene3839;Dbxref=Genbank:WP_038401276.1;Name=WP_038401276.1;gbkey=CDS;product=autotransporter;protein_id=WP_038401276.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4257986 4258399 . - . ID=gene3840;Name=DJ40_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19290;old_locus_tag=DJ40_3791 NZ_CP008943.1 Protein Homology CDS 4257986 4258399 . - 0 ID=cds3740;Parent=gene3840;Dbxref=Genbank:WP_012104845.1;Name=WP_012104845.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104845.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4258762 4259373 . + . ID=gene3841;Name=DJ40_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19295;old_locus_tag=DJ40_3792 NZ_CP008943.1 Protein Homology CDS 4258762 4259373 . + 0 ID=cds3741;Parent=gene3841;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4259551 4260450 . + . ID=gene3842;Name=DJ40_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19300;old_locus_tag=DJ40_3793 NZ_CP008943.1 Protein Homology CDS 4259551 4260450 . + 0 ID=cds3742;Parent=gene3842;Dbxref=Genbank:WP_011192751.1;Name=WP_011192751.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_011192751.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4260548 4261441 . - . ID=gene3843;Name=DJ40_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19305;old_locus_tag=DJ40_3794 NZ_CP008943.1 Protein Homology CDS 4260548 4261441 . - 0 ID=cds3743;Parent=gene3843;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4261504 4262127 . - . ID=gene3844;Name=DJ40_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19310;old_locus_tag=DJ40_3795 NZ_CP008943.1 Protein Homology CDS 4261504 4262127 . - 0 ID=cds3744;Parent=gene3844;Dbxref=Genbank:WP_024062966.1;Name=WP_024062966.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_024062966.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4262530 4263501 . - . ID=gene3845;Name=DJ40_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19315;old_locus_tag=DJ40_3796 NZ_CP008943.1 Protein Homology CDS 4262530 4263501 . - 0 ID=cds3745;Parent=gene3845;Dbxref=Genbank:WP_038401279.1;Name=WP_038401279.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401279.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4263771 4264643 . + . ID=gene3846;Name=DJ40_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19320;old_locus_tag=DJ40_3797 NZ_CP008943.1 Protein Homology CDS 4263771 4264643 . + 0 ID=cds3746;Parent=gene3846;Dbxref=Genbank:WP_038401281.1;Name=WP_038401281.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_038401281.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4264725 4265195 . + . ID=gene3847;Name=DJ40_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19325;old_locus_tag=DJ40_3798 NZ_CP008943.1 Protein Homology CDS 4264725 4265195 . + 0 ID=cds3747;Parent=gene3847;Dbxref=Genbank:WP_011192748.1;Name=WP_011192748.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_011192748.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4265235 4265387 . + . ID=gene3848;Name=DJ40_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19330 NZ_CP008943.1 Protein Homology CDS 4265235 4265387 . + 0 ID=cds3748;Parent=gene3848;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4265384 4266262 . + . ID=gene3849;Name=DJ40_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19335;old_locus_tag=DJ40_3799 NZ_CP008943.1 Protein Homology CDS 4265384 4266262 . + 0 ID=cds3749;Parent=gene3849;Dbxref=Genbank:WP_011192747.1;Name=WP_011192747.1;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_011192747.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4266867 4268399 . + . ID=gene3850;Name=DJ40_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19340;old_locus_tag=DJ40_3800 NZ_CP008943.1 Protein Homology CDS 4266867 4268399 . + 0 ID=cds3750;Parent=gene3850;Dbxref=Genbank:WP_002231046.1;Name=WP_002231046.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002231046.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4268732 4269769 . + . ID=gene3851;Name=DJ40_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19345;old_locus_tag=DJ40_3801 NZ_CP008943.1 Protein Homology CDS 4268732 4269769 . + 0 ID=cds3751;Parent=gene3851;Dbxref=Genbank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=WP_002208512.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4269769 4270602 . + . ID=gene3852;Name=DJ40_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19350;old_locus_tag=DJ40_3802 NZ_CP008943.1 Protein Homology CDS 4269769 4270602 . + 0 ID=cds3752;Parent=gene3852;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4270602 4271477 . + . ID=gene3853;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=DJ40_RS19355;old_locus_tag=DJ40_3803 NZ_CP008943.1 Protein Homology CDS 4270602 4271477 . + 0 ID=cds3753;Parent=gene3853;Dbxref=Genbank:WP_011192746.1;Name=WP_011192746.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_011192746.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4271467 4272558 . + . ID=gene3854;Name=DJ40_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19360;old_locus_tag=DJ40_3804 NZ_CP008943.1 Protein Homology CDS 4271467 4272558 . + 0 ID=cds3754;Parent=gene3854;Dbxref=Genbank:WP_011192745.1;Name=WP_011192745.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_011192745.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4272729 4273607 . + . ID=gene3855;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=DJ40_RS19365;old_locus_tag=DJ40_3805 NZ_CP008943.1 Protein Homology CDS 4272729 4273607 . + 0 ID=cds3755;Parent=gene3855;Dbxref=Genbank:WP_038401284.1;Name=WP_038401284.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase;protein_id=WP_038401284.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4273784 4274491 . - . ID=gene3856;Name=DJ40_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19370;old_locus_tag=DJ40_3806 NZ_CP008943.1 Protein Homology CDS 4273784 4274491 . - 0 ID=cds3756;Parent=gene3856;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4274488 4276032 . - . ID=gene3857;Name=DJ40_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19375;old_locus_tag=DJ40_3807 NZ_CP008943.1 Protein Homology CDS 4274488 4276032 . - 0 ID=cds3757;Parent=gene3857;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4276088 4276256 . + . ID=id313;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4276265 4277683 . - . ID=gene3858;Name=DJ40_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19380;old_locus_tag=DJ40_3808 NZ_CP008943.1 Protein Homology CDS 4276265 4277683 . - 0 ID=cds3758;Parent=gene3858;Dbxref=Genbank:WP_002208502.1;Name=WP_002208502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208502.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4278384 4279565 . + . ID=gene3859;Name=DJ40_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19385;old_locus_tag=DJ40_3809 NZ_CP008943.1 Protein Homology CDS 4278384 4279565 . + 0 ID=cds3759;Parent=gene3859;Dbxref=Genbank:WP_002208500.1;Name=WP_002208500.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002208500.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4279599 4280819 . + . ID=gene3860;Name=DJ40_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19390;old_locus_tag=DJ40_3810 NZ_CP008943.1 Protein Homology CDS 4279599 4280819 . + 0 ID=cds3760;Parent=gene3860;Dbxref=Genbank:WP_011192741.1;Name=WP_011192741.1;gbkey=CDS;product=peptidase M24;protein_id=WP_011192741.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4280962 4281159 . + . ID=gene3861;Name=DJ40_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19395;old_locus_tag=DJ40_3811 NZ_CP008943.1 Protein Homology CDS 4280962 4281159 . + 0 ID=cds3761;Parent=gene3861;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4281156 4282616 . + . ID=gene3862;Name=DJ40_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19400;old_locus_tag=DJ40_3812 NZ_CP008943.1 Protein Homology CDS 4281156 4282616 . + 0 ID=cds3762;Parent=gene3862;Dbxref=Genbank:WP_038401287.1;Name=WP_038401287.1;gbkey=CDS;product=sodium:solute symporter;protein_id=WP_038401287.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4282676 4284322 . + . ID=gene3863;Name=DJ40_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19405;old_locus_tag=DJ40_3813 NZ_CP008943.1 Protein Homology CDS 4282676 4284322 . + 0 ID=cds3763;Parent=gene3863;Dbxref=Genbank:WP_038401290.1;Name=WP_038401290.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_038401290.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4284577 4286613 . - . ID=gene3864;Name=DJ40_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19410;old_locus_tag=DJ40_3814 NZ_CP008943.1 Protein Homology CDS 4284577 4286613 . - 0 ID=cds3764;Parent=gene3864;Dbxref=Genbank:WP_011192738.1;Name=WP_011192738.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=Macrolide export ATP-binding/permease MacB 2;protein_id=WP_011192738.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4286617 4287822 . - . ID=gene3865;Name=DJ40_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19415;old_locus_tag=DJ40_3815 NZ_CP008943.1 Protein Homology CDS 4286617 4287822 . - 0 ID=cds3765;Parent=gene3865;Dbxref=Genbank:WP_038401293.1;Name=WP_038401293.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_038401293.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4288010 4288693 . + . ID=gene3866;Name=DJ40_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19420;old_locus_tag=DJ40_3816 NZ_CP008943.1 Protein Homology CDS 4288010 4288693 . + 0 ID=cds3766;Parent=gene3866;Dbxref=Genbank:WP_002208494.1;Name=WP_002208494.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208494.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4288719 4290068 . + . ID=gene3867;Name=DJ40_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19425;old_locus_tag=DJ40_3817 NZ_CP008943.1 Protein Homology CDS 4288719 4290068 . + 0 ID=cds3767;Parent=gene3867;Dbxref=Genbank:WP_011192737.1;Name=WP_011192737.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_011192737.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4290251 4290760 . - . ID=gene3868;Name=DJ40_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19430;old_locus_tag=DJ40_3818 NZ_CP008943.1 Protein Homology CDS 4290251 4290760 . - 0 ID=cds3768;Parent=gene3868;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4290809 4292536 . - . ID=gene3869;Name=DJ40_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19435;old_locus_tag=DJ40_3819 NZ_CP008943.1 Protein Homology CDS 4290809 4292536 . - 0 ID=cds3769;Parent=gene3869;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4292585 4292842 . - . ID=gene3870;Name=DJ40_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19440;old_locus_tag=DJ40_3820 NZ_CP008943.1 Protein Homology CDS 4292585 4292842 . - 0 ID=cds3770;Parent=gene3870;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4293341 4294309 . - . ID=gene3871;Name=DJ40_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19445;old_locus_tag=DJ40_3821 NZ_CP008943.1 Protein Homology CDS 4293341 4294309 . - 0 ID=cds3771;Parent=gene3871;Dbxref=Genbank:WP_002222180.1;Name=WP_002222180.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4294466 4295200 . - . ID=gene3872;Name=DJ40_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19450;old_locus_tag=DJ40_3822 NZ_CP008943.1 Protein Homology CDS 4294466 4295200 . - 0 ID=cds3772;Parent=gene3872;Dbxref=Genbank:WP_002231042.1;Name=WP_002231042.1;gbkey=CDS;product=cysteine biosynthesis protein CysZ;protein_id=WP_002231042.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4295449 4296435 . + . ID=gene3873;Name=DJ40_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19455;old_locus_tag=DJ40_3823 NZ_CP008943.1 Protein Homology CDS 4295449 4296435 . + 0 ID=cds3773;Parent=gene3873;Dbxref=Genbank:WP_038401296.1;Name=WP_038401296.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_038401296.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4296526 4298538 . + . ID=gene3874;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=DJ40_RS19460;old_locus_tag=DJ40_3824 NZ_CP008943.1 Protein Homology CDS 4296526 4298538 . + 0 ID=cds3774;Parent=gene3874;Dbxref=Genbank:WP_038401299.1;Name=WP_038401299.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=WP_038401299.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4298558 4298773 . + . ID=gene3875;Name=DJ40_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19465;old_locus_tag=DJ40_3825 NZ_CP008943.1 Protein Homology CDS 4298558 4298773 . + 0 ID=cds3775;Parent=gene3875;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4298874 4299221 . - . ID=gene3876;Name=DJ40_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19470;old_locus_tag=DJ40_3826 NZ_CP008943.1 Protein Homology CDS 4298874 4299221 . - 0 ID=cds3776;Parent=gene3876;Dbxref=Genbank:WP_024062956.1;Name=WP_024062956.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024062956.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4299370 4299975 . - . ID=gene3877;Name=DJ40_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19475;old_locus_tag=DJ40_3827 NZ_CP008943.1 Protein Homology CDS 4299370 4299975 . - 0 ID=cds3777;Parent=gene3877;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4300170 4300245 . - . ID=gene3878;Name=DJ40_RS19480;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS19480;old_locus_tag=DJ40_3828 NZ_CP008943.1 tRNAscan-SE tRNA 4300170 4300245 . - . ID=rna91;Parent=gene3878;anticodon=(pos:complement(4300210..4300212));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 tRNAscan-SE exon 4300170 4300245 . - . ID=id314;Parent=rna91;anticodon=(pos:complement(4300210..4300212));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 RefSeq gene 4300323 4300398 . - . ID=gene3879;Name=DJ40_RS19485;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS19485;old_locus_tag=DJ40_3830 NZ_CP008943.1 tRNAscan-SE tRNA 4300323 4300398 . - . ID=rna92;Parent=gene3879;anticodon=(pos:complement(4300363..4300365));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 tRNAscan-SE exon 4300323 4300398 . - . ID=id315;Parent=rna92;anticodon=(pos:complement(4300363..4300365));gbkey=tRNA;product=tRNA-Ala NZ_CP008943.1 RefSeq gene 4300630 4302045 . - . ID=gene3880;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=DJ40_RS19490;old_locus_tag=DJ40_3831 NZ_CP008943.1 Protein Homology CDS 4300630 4302045 . - 0 ID=cds3778;Parent=gene3880;Dbxref=Genbank:WP_002222185.1;Name=WP_002222185.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_002222185.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4302320 4302395 . + . ID=gene3881;Name=DJ40_RS19495;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS19495;old_locus_tag=DJ40_3832 NZ_CP008943.1 tRNAscan-SE tRNA 4302320 4302395 . + . ID=rna93;Parent=gene3881;anticodon=(pos:4302353..4302355);gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 tRNAscan-SE exon 4302320 4302395 . + . ID=id316;Parent=rna93;anticodon=(pos:4302353..4302355);gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 RefSeq gene 4302432 4302507 . + . ID=gene3882;Name=DJ40_RS19500;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS19500;old_locus_tag=DJ40_3833 NZ_CP008943.1 tRNAscan-SE tRNA 4302432 4302507 . + . ID=rna94;Parent=gene3882;anticodon=(pos:4302465..4302467);gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 tRNAscan-SE exon 4302432 4302507 . + . ID=id317;Parent=rna94;anticodon=(pos:4302465..4302467);gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 RefSeq gene 4302552 4302627 . + . ID=gene3883;Name=DJ40_RS19505;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS19505;old_locus_tag=DJ40_3834 NZ_CP008943.1 tRNAscan-SE tRNA 4302552 4302627 . + . ID=rna95;Parent=gene3883;anticodon=(pos:4302585..4302587);gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 tRNAscan-SE exon 4302552 4302627 . + . ID=id318;Parent=rna95;anticodon=(pos:4302585..4302587);gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 RefSeq gene 4302827 4302902 . + . ID=gene3884;Name=DJ40_RS19510;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS19510;old_locus_tag=DJ40_3835 NZ_CP008943.1 tRNAscan-SE tRNA 4302827 4302902 . + . ID=rna96;Parent=gene3884;anticodon=(pos:4302860..4302862);gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 tRNAscan-SE exon 4302827 4302902 . + . ID=id319;Parent=rna96;anticodon=(pos:4302860..4302862);gbkey=tRNA;product=tRNA-Lys NZ_CP008943.1 RefSeq repeat_region 4303327 4303508 . + . ID=id320;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4303534 4304718 . - . ID=gene3885;Name=DJ40_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19515;old_locus_tag=DJ40_3836 NZ_CP008943.1 Protein Homology CDS 4303534 4304718 . - 0 ID=cds3779;Parent=gene3885;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4305169 4306398 . + . ID=gene3886;Name=DJ40_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19520;old_locus_tag=DJ40_3837 NZ_CP008943.1 Protein Homology CDS 4305169 4306398 . + 0 ID=cds3780;Parent=gene3886;Dbxref=Genbank:WP_002211621.1;Name=WP_002211621.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_002211621.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4306491 4306805 . - . ID=gene3887;Name=DJ40_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19525;old_locus_tag=DJ40_3838 NZ_CP008943.1 Protein Homology CDS 4306491 4306805 . - 0 ID=cds3781;Parent=gene3887;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4307075 4308064 . - . ID=gene3888;Name=DJ40_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19530;old_locus_tag=DJ40_3839 NZ_CP008943.1 Protein Homology CDS 4307075 4308064 . - 0 ID=cds3782;Parent=gene3888;Dbxref=Genbank:WP_011192731.1;Name=WP_011192731.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_011192731.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4308200 4309078 . - . ID=gene3889;Name=DJ40_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19535;old_locus_tag=DJ40_3840 NZ_CP008943.1 Protein Homology CDS 4308200 4309078 . - 0 ID=cds3783;Parent=gene3889;Dbxref=Genbank:WP_038401301.1;Name=WP_038401301.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038401301.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4309181 4309657 . + . ID=gene3890;Name=DJ40_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19540;old_locus_tag=DJ40_3841 NZ_CP008943.1 Protein Homology CDS 4309181 4309657 . + 0 ID=cds3784;Parent=gene3890;Dbxref=Genbank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002211616.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4309838 4310809 . + . ID=gene3891;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=DJ40_RS19545;old_locus_tag=DJ40_3842 NZ_CP008943.1 Protein Homology CDS 4309838 4310809 . + 0 ID=cds3785;Parent=gene3891;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4310887 4312134 . - . ID=gene3892;Name=DJ40_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19550;old_locus_tag=DJ40_3843 NZ_CP008943.1 Protein Homology CDS 4310887 4312134 . - 0 ID=cds3786;Parent=gene3892;Dbxref=Genbank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211614.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4312400 4313635 . + . ID=gene3893;Name=DJ40_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19555;old_locus_tag=DJ40_3844 NZ_CP008943.1 Protein Homology CDS 4312400 4313635 . + 0 ID=cds3787;Parent=gene3893;Dbxref=Genbank:WP_002231034.1;Name=WP_002231034.1;gbkey=CDS;product=aspartate aminotransferase;protein_id=WP_002231034.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4313880 4314404 . + . ID=gene3894;Name=DJ40_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19560;old_locus_tag=DJ40_3845 NZ_CP008943.1 Protein Homology CDS 4313880 4314404 . + 0 ID=cds3788;Parent=gene3894;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4314499 4314930 . - . ID=gene3895;Name=DJ40_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19565;old_locus_tag=DJ40_3846 NZ_CP008943.1 Protein Homology CDS 4314499 4314930 . - 0 ID=cds3789;Parent=gene3895;Dbxref=Genbank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_002211610.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4315520 4316191 . + . ID=gene3896;Name=DJ40_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19570;old_locus_tag=DJ40_3847 NZ_CP008943.1 Protein Homology CDS 4315520 4316191 . + 0 ID=cds3790;Parent=gene3896;Dbxref=Genbank:WP_012104857.1;Name=WP_012104857.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104857.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4316218 4316574 . + . ID=gene3897;Name=DJ40_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19575;old_locus_tag=DJ40_3848 NZ_CP008943.1 Protein Homology CDS 4316218 4316574 . + 0 ID=cds3791;Parent=gene3897;Dbxref=Genbank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4316571 4317227 . + . ID=gene3898;Name=DJ40_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19580;old_locus_tag=DJ40_3849 NZ_CP008943.1 Protein Homology CDS 4316571 4317227 . + 0 ID=cds3792;Parent=gene3898;Dbxref=Genbank:WP_038401304.1;Name=WP_038401304.1;gbkey=CDS;product=lipoprotein NMB1124/NMB1162;protein_id=WP_038401304.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4317473 4318042 . - . ID=gene3899;Name=DJ40_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19585;old_locus_tag=DJ40_3850 NZ_CP008943.1 Protein Homology CDS 4317473 4318042 . - 0 ID=cds3793;Parent=gene3899;Dbxref=Genbank:WP_038401307.1;Name=WP_038401307.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_038401307.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4318039 4318635 . - . ID=gene3900;Name=DJ40_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19590;old_locus_tag=DJ40_3851 NZ_CP008943.1 Protein Homology CDS 4318039 4318635 . - 0 ID=cds3794;Parent=gene3900;Dbxref=Genbank:WP_002228419.1;Name=WP_002228419.1;gbkey=CDS;product=nitrate reductase subunit delta;protein_id=WP_002228419.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4318661 4319011 . + . ID=id321;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4319117 4319893 . - . ID=gene3901;Name=DJ40_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19595;old_locus_tag=DJ40_3852 NZ_CP008943.1 Protein Homology CDS 4319117 4319893 . - 0 ID=cds3795;Parent=gene3901;Dbxref=Genbank:WP_038401310.1;Name=WP_038401310.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_038401310.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4319895 4320512 . - . ID=gene3902;Name=DJ40_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19600;old_locus_tag=DJ40_3853 NZ_CP008943.1 Protein Homology CDS 4319895 4320512 . - 0 ID=cds3796;Parent=gene3902;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4320524 4322950 . - . ID=gene3903;Name=DJ40_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19605;old_locus_tag=DJ40_3854 NZ_CP008943.1 Protein Homology CDS 4320524 4322950 . - 0 ID=cds3797;Parent=gene3903;Dbxref=Genbank:WP_038401312.1;Name=WP_038401312.1;gbkey=CDS;product=dimethyl sulfoxide reductase;protein_id=WP_038401312.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4323781 4324629 . + . ID=gene3904;Name=DJ40_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19610;old_locus_tag=DJ40_3855 NZ_CP008943.1 Protein Homology CDS 4323781 4324629 . + 0 ID=cds3798;Parent=gene3904;Dbxref=Genbank:WP_038401314.1;Name=WP_038401314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401314.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4324858 4325337 . - . ID=gene3905;Name=DJ40_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19615;old_locus_tag=DJ40_3856 NZ_CP008943.1 Protein Homology CDS 4324858 4325337 . - 0 ID=cds3799;Parent=gene3905;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4325788 4326312 . + . ID=gene3906;Name=DJ40_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19620;old_locus_tag=DJ40_3858 NZ_CP008943.1 Protein Homology CDS 4325788 4326312 . + 0 ID=cds3800;Parent=gene3906;Dbxref=Genbank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211599.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4326392 4327441 . - . ID=gene3907;Name=DJ40_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19625;old_locus_tag=DJ40_3859 NZ_CP008943.1 Protein Homology CDS 4326392 4327441 . - 0 ID=cds3801;Parent=gene3907;Dbxref=Genbank:WP_012303902.1;Name=WP_012303902.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_012303902.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4327438 4329024 . - . ID=gene3908;Name=DJ40_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19630;old_locus_tag=DJ40_3860 NZ_CP008943.1 Protein Homology CDS 4327438 4329024 . - 0 ID=cds3802;Parent=gene3908;Dbxref=Genbank:WP_012303903.1;Name=WP_012303903.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_012303903.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4329080 4330099 . - . ID=gene3909;Name=DJ40_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19635;old_locus_tag=DJ40_3861 NZ_CP008943.1 Protein Homology CDS 4329080 4330099 . - 0 ID=cds3803;Parent=gene3909;Dbxref=Genbank:WP_011192720.1;Name=WP_011192720.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_011192720.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4330428 4331522 . + . ID=gene3910;Name=DJ40_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19640;old_locus_tag=DJ40_3862 NZ_CP008943.1 Protein Homology CDS 4330428 4331522 . + 0 ID=cds3804;Parent=gene3910;Dbxref=Genbank:WP_012303905.1;Name=WP_012303905.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_012303905.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4332764 4333366 . + . ID=gene3911;Name=DJ40_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19645;old_locus_tag=DJ40_3863 NZ_CP008943.1 Protein Homology CDS 4332764 4333366 . + 0 ID=cds3805;Parent=gene3911;Dbxref=Genbank:WP_011192718.1;Name=WP_011192718.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_011192718.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4333739 4334221 . - . ID=gene3912;Name=DJ40_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19650;old_locus_tag=DJ40_3864 NZ_CP008943.1 Protein Homology CDS 4333739 4334221 . - 0 ID=cds3806;Parent=gene3912;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4334218 4335900 . - . ID=gene3913;Name=DJ40_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19655;old_locus_tag=DJ40_3865 NZ_CP008943.1 Protein Homology CDS 4334218 4335900 . - 0 ID=cds3807;Parent=gene3913;Dbxref=Genbank:WP_012104863.1;Name=WP_012104863.1;gbkey=CDS;product=membrane protein;protein_id=WP_012104863.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4335901 4336566 . - . ID=gene3914;Name=DJ40_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19660;old_locus_tag=DJ40_3866 NZ_CP008943.1 Protein Homology CDS 4335901 4336566 . - 0 ID=cds3808;Parent=gene3914;Dbxref=Genbank:WP_038401316.1;Name=WP_038401316.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401316.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4336563 4337900 . - . ID=gene3915;Name=DJ40_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19665;old_locus_tag=DJ40_3867 NZ_CP008943.1 Protein Homology CDS 4336563 4337900 . - 0 ID=cds3809;Parent=gene3915;Dbxref=Genbank:WP_012104865.1;Name=WP_012104865.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_012104865.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4337940 4338971 . - . ID=gene3916;Name=DJ40_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19670;old_locus_tag=DJ40_3868 NZ_CP008943.1 Protein Homology CDS 4337940 4338971 . - 0 ID=cds3810;Parent=gene3916;Dbxref=Genbank:WP_011192714.1;Name=WP_011192714.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192714.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4338978 4340171 . - . ID=gene3917;Name=DJ40_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19675;old_locus_tag=DJ40_3869 NZ_CP008943.1 Protein Homology CDS 4338978 4340171 . - 0 ID=cds3811;Parent=gene3917;Dbxref=Genbank:WP_011192713.1;Name=WP_011192713.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192713.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4340270 4341295 . - . ID=gene3918;Name=DJ40_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19680;old_locus_tag=DJ40_3870 NZ_CP008943.1 Protein Homology CDS 4340270 4341295 . - 0 ID=cds3812;Parent=gene3918;Dbxref=Genbank:WP_038401318.1;Name=WP_038401318.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_038401318.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4341295 4343175 . - . ID=gene3919;Name=DJ40_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19685;old_locus_tag=DJ40_3871 NZ_CP008943.1 Protein Homology CDS 4341295 4343175 . - 0 ID=cds3813;Parent=gene3919;Dbxref=Genbank:WP_002211582.1;Name=WP_002211582.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211582.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4343960 4346617 . + . ID=gene3920;Name=DJ40_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19690;old_locus_tag=DJ40_3872 NZ_CP008943.1 Protein Homology CDS 4343960 4346617 . + 0 ID=cds3814;Parent=gene3920;Dbxref=Genbank:WP_012104866.1;Name=WP_012104866.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_012104866.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4346828 4347373 . + . ID=gene3921;Name=DJ40_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19695;old_locus_tag=DJ40_3873 NZ_CP008943.1 Protein Homology CDS 4346828 4347373 . + 0 ID=cds3815;Parent=gene3921;Dbxref=Genbank:WP_024062947.1;Name=WP_024062947.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_024062947.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4347530 4348291 . + . ID=gene3922;Name=DJ40_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19700;old_locus_tag=DJ40_3874 NZ_CP008943.1 Protein Homology CDS 4347530 4348291 . + 0 ID=cds3816;Parent=gene3922;Dbxref=Genbank:WP_002211579.1;Name=WP_002211579.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211579.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4348419 4349957 . + . ID=gene3923;Name=DJ40_RS19705;end_range=4349957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS19705;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 4348419 4349957 . + 0 ID=cds3817;Parent=gene3923;end_range=4349957,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4349889 4351091 . + . ID=gene3924;Name=DJ40_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19710 NZ_CP008943.1 Protein Homology CDS 4349889 4351091 . + 0 ID=cds3818;Parent=gene3924;Dbxref=Genbank:WP_042592899.1;Name=WP_042592899.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_042592899.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4351076 4351684 . + . ID=gene3925;Name=DJ40_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19715;old_locus_tag=DJ40_3876 NZ_CP008943.1 Protein Homology CDS 4351076 4351684 . + 0 ID=cds3819;Parent=gene3925;Dbxref=Genbank:WP_011192708.1;Name=WP_011192708.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_011192708.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4351791 4352315 . + . ID=gene3926;Name=DJ40_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19720;old_locus_tag=DJ40_3877 NZ_CP008943.1 Protein Homology CDS 4351791 4352315 . + 0 ID=cds3820;Parent=gene3926;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4352339 4353841 . + . ID=gene3927;Name=DJ40_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19725;old_locus_tag=DJ40_3878 NZ_CP008943.1 Protein Homology CDS 4352339 4353841 . + 0 ID=cds3821;Parent=gene3927;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4354174 4354659 . + . ID=gene3928;Name=DJ40_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19730;old_locus_tag=DJ40_3879 NZ_CP008943.1 Protein Homology CDS 4354174 4354659 . + 0 ID=cds3822;Parent=gene3928;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4354933 4355472 . + . ID=gene3929;Name=DJ40_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19735;old_locus_tag=DJ40_3880 NZ_CP008943.1 Protein Homology CDS 4354933 4355472 . + 0 ID=cds3823;Parent=gene3929;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4355476 4356825 . + . ID=gene3930;Name=DJ40_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19740;old_locus_tag=DJ40_3881 NZ_CP008943.1 Protein Homology CDS 4355476 4356825 . + 0 ID=cds3824;Parent=gene3930;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4356822 4358198 . + . ID=gene3931;Name=DJ40_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19745;old_locus_tag=DJ40_3882 NZ_CP008943.1 Protein Homology CDS 4356822 4358198 . + 0 ID=cds3825;Parent=gene3931;Dbxref=Genbank:WP_038401320.1;Name=WP_038401320.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401320.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4358207 4362034 . + . ID=gene3932;Name=DJ40_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19750;old_locus_tag=DJ40_3883 NZ_CP008943.1 Protein Homology CDS 4358207 4362034 . + 0 ID=cds3826;Parent=gene3932;Dbxref=Genbank:WP_038401322.1;Name=WP_038401322.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_038401322.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4362361 4365003 . + . ID=gene3933;Name=DJ40_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19755;old_locus_tag=DJ40_3884 NZ_CP008943.1 Protein Homology CDS 4362361 4365003 . + 0 ID=cds3827;Parent=gene3933;Dbxref=Genbank:WP_038401324.1;Name=WP_038401324.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_038401324.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4364574 4364961 . + . ID=id322;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4365102 4365362 . + . ID=gene3934;Name=DJ40_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19760;old_locus_tag=DJ40_3885 NZ_CP008943.1 Protein Homology CDS 4365102 4365362 . + 0 ID=cds3828;Parent=gene3934;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4365368 4366210 . + . ID=gene3935;Name=DJ40_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19765;old_locus_tag=DJ40_3886 NZ_CP008943.1 Protein Homology CDS 4365368 4366210 . + 0 ID=cds3829;Parent=gene3935;Dbxref=Genbank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354537.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4366230 4367036 . + . ID=gene3936;Name=DJ40_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19770;old_locus_tag=DJ40_3887 NZ_CP008943.1 Protein Homology CDS 4366230 4367036 . + 0 ID=cds3830;Parent=gene3936;Dbxref=Genbank:WP_002209685.1;Name=WP_002209685.1;gbkey=CDS;product=ImpE family protein;protein_id=WP_002209685.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4367101 4367580 . + . ID=gene3937;Name=DJ40_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19775;old_locus_tag=DJ40_3888 NZ_CP008943.1 Protein Homology CDS 4367101 4367580 . + 0 ID=cds3831;Parent=gene3937;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4367605 4367952 . + . ID=gene3938;Name=DJ40_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19780;old_locus_tag=DJ40_3889 NZ_CP008943.1 Protein Homology CDS 4367605 4367952 . + 0 ID=cds3832;Parent=gene3938;Dbxref=Genbank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209687.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4368045 4368386 . - . ID=gene3939;Name=DJ40_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19785;old_locus_tag=DJ40_3890 NZ_CP008943.1 Protein Homology CDS 4368045 4368386 . - 0 ID=cds3833;Parent=gene3939;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4368762 4370801 . - . ID=gene3940;Name=DJ40_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19790;old_locus_tag=DJ40_3891 NZ_CP008943.1 Protein Homology CDS 4368762 4370801 . - 0 ID=cds3834;Parent=gene3940;Dbxref=Genbank:WP_038401326.1;Name=WP_038401326.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401326.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4370806 4371348 . - . ID=gene3941;Name=DJ40_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19795;old_locus_tag=DJ40_3892 NZ_CP008943.1 Protein Homology CDS 4370806 4371348 . - 0 ID=cds3835;Parent=gene3941;Dbxref=Genbank:WP_002209691.1;Name=WP_002209691.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209691.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4371635 4371709 . + . ID=gene3942;Name=DJ40_RS19800;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS19800;old_locus_tag=DJ40_3893 NZ_CP008943.1 tRNAscan-SE tRNA 4371635 4371709 . + . ID=rna97;Parent=gene3942;anticodon=(pos:4371668..4371670);gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 tRNAscan-SE exon 4371635 4371709 . + . ID=id323;Parent=rna97;anticodon=(pos:4371668..4371670);gbkey=tRNA;product=tRNA-Arg NZ_CP008943.1 RefSeq gene 4371965 4372432 . + . ID=gene3943;Name=DJ40_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19805;old_locus_tag=DJ40_3894 NZ_CP008943.1 Protein Homology CDS 4371965 4372432 . + 0 ID=cds3836;Parent=gene3943;Dbxref=Genbank:WP_038401328.1;Name=WP_038401328.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401328.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4372879 4373535 . + . ID=gene3944;Name=DJ40_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19810;old_locus_tag=DJ40_3895 NZ_CP008943.1 Protein Homology CDS 4372879 4373535 . + 0 ID=cds3837;Parent=gene3944;Dbxref=Genbank:WP_012303914.1;Name=WP_012303914.1;gbkey=CDS;product=cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=WP_012303914.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4373505 4374164 . + . ID=gene3945;Name=DJ40_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19815;old_locus_tag=DJ40_3896 NZ_CP008943.1 Protein Homology CDS 4373505 4374164 . + 0 ID=cds3838;Parent=gene3945;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4374227 4374964 . + . ID=gene3946;Name=DJ40_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19820;old_locus_tag=DJ40_3897 NZ_CP008943.1 Protein Homology CDS 4374227 4374964 . + 0 ID=cds3839;Parent=gene3946;Dbxref=Genbank:WP_002209695.1;Name=WP_002209695.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_002209695.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4374961 4375263 . + . ID=gene3947;Name=DJ40_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19825;old_locus_tag=DJ40_3898 NZ_CP008943.1 Protein Homology CDS 4374961 4375263 . + 0 ID=cds3840;Parent=gene3947;Dbxref=Genbank:WP_002209696.1;Name=WP_002209696.1;gbkey=CDS;product=heme exporter protein D;protein_id=WP_002209696.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4375260 4375754 . + . ID=gene3948;Name=DJ40_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19830;old_locus_tag=DJ40_3899 NZ_CP008943.1 Protein Homology CDS 4375260 4375754 . + 0 ID=cds3841;Parent=gene3948;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4375751 4377721 . + . ID=gene3949;Name=DJ40_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19835;old_locus_tag=DJ40_3900 NZ_CP008943.1 Protein Homology CDS 4375751 4377721 . + 0 ID=cds3842;Parent=gene3949;Dbxref=Genbank:WP_038401330.1;Name=WP_038401330.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=cytochrome C biogenesis protein CcmF;protein_id=WP_038401330.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4377718 4378284 . + . ID=gene3950;Name=DJ40_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19840;old_locus_tag=DJ40_3901 NZ_CP008943.1 Protein Homology CDS 4377718 4378284 . + 0 ID=cds3843;Parent=gene3950;Dbxref=Genbank:WP_002209699.1;Name=WP_002209699.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=WP_002209699.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4378281 4378793 . + . ID=gene3951;Name=DJ40_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19845;old_locus_tag=DJ40_3902 NZ_CP008943.1 Protein Homology CDS 4378281 4378793 . + 0 ID=cds3844;Parent=gene3951;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4378793 4380019 . + . ID=gene3952;Name=DJ40_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19850;old_locus_tag=DJ40_3903 NZ_CP008943.1 Protein Homology CDS 4378793 4380019 . + 0 ID=cds3845;Parent=gene3952;Dbxref=Genbank:WP_038401333.1;Name=WP_038401333.1;gbkey=CDS;product=cytochrome C;protein_id=WP_038401333.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4380055 4380819 . + . ID=gene3953;Name=DJ40_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19855;old_locus_tag=DJ40_3904 NZ_CP008943.1 Protein Homology CDS 4380055 4380819 . + 0 ID=cds3846;Parent=gene3953;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4380926 4382191 . - . ID=gene3954;Name=DJ40_RS19860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS19860;old_locus_tag=DJ40_3905;pseudo=true NZ_CP008943.1 Protein Homology CDS 4380926 4382191 . - 0 ID=cds3847;Parent=gene3954;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;pseudo=true;transl_except=(pos:complement(4381034..4381036)%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 4382617 4382901 . + . ID=gene3955;Name=DJ40_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19865;old_locus_tag=DJ40_3906 NZ_CP008943.1 Protein Homology CDS 4382617 4382901 . + 0 ID=cds3848;Parent=gene3955;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4383188 4384498 . + . ID=gene3956;Name=DJ40_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19870;old_locus_tag=DJ40_3907 NZ_CP008943.1 Protein Homology CDS 4383188 4384498 . + 0 ID=cds3849;Parent=gene3956;Dbxref=Genbank:WP_038401335.1;Name=WP_038401335.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_038401335.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4384498 4386822 . + . ID=gene3957;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=DJ40_RS19875;old_locus_tag=DJ40_3908 NZ_CP008943.1 Protein Homology CDS 4384498 4386822 . + 0 ID=cds3850;Parent=gene3957;Dbxref=Genbank:WP_032466531.1;Name=WP_032466531.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty acid oxidation complex subunit alpha;protein_id=WP_032466531.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4387408 4387899 . + . ID=gene3958;Name=DJ40_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19880;old_locus_tag=DJ40_3909 NZ_CP008943.1 Protein Homology CDS 4387408 4387899 . + 0 ID=cds3851;Parent=gene3958;Dbxref=Genbank:WP_002209707.1;Name=WP_002209707.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_002209707.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4388149 4388679 . - . ID=gene3959;Name=DJ40_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19885;old_locus_tag=DJ40_3910 NZ_CP008943.1 Protein Homology CDS 4388149 4388679 . - 0 ID=cds3852;Parent=gene3959;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4389049 4389981 . + . ID=gene3960;Name=DJ40_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19890;old_locus_tag=DJ40_3911 NZ_CP008943.1 Protein Homology CDS 4389049 4389981 . + 0 ID=cds3853;Parent=gene3960;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4390058 4391143 . + . ID=gene3961;Name=DJ40_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19895;old_locus_tag=DJ40_3912 NZ_CP008943.1 Protein Homology CDS 4390058 4391143 . + 0 ID=cds3854;Parent=gene3961;Dbxref=Genbank:WP_002209711.1;Name=WP_002209711.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4391149 4391976 . + . ID=gene3962;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=DJ40_RS19900;old_locus_tag=DJ40_3913 NZ_CP008943.1 Protein Homology CDS 4391149 4391976 . + 0 ID=cds3855;Parent=gene3962;Dbxref=Genbank:WP_038401337.1;Name=WP_038401337.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=murein endopeptidase;protein_id=WP_038401337.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4391980 4392786 . + . ID=gene3963;Name=DJ40_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19905;old_locus_tag=DJ40_3914 NZ_CP008943.1 Protein Homology CDS 4391980 4392786 . + 0 ID=cds3856;Parent=gene3963;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4392901 4393443 . + . ID=gene3964;Name=DJ40_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19910;old_locus_tag=DJ40_3915 NZ_CP008943.1 Protein Homology CDS 4392901 4393443 . + 0 ID=cds3857;Parent=gene3964;Dbxref=Genbank:WP_012104884.1;Name=WP_012104884.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104884.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4393501 4393779 . + . ID=gene3965;Name=DJ40_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19915;old_locus_tag=DJ40_3916 NZ_CP008943.1 Protein Homology CDS 4393501 4393779 . + 0 ID=cds3858;Parent=gene3965;Dbxref=Genbank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209715.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4393957 4396026 . - . ID=gene3966;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=DJ40_RS19920;old_locus_tag=DJ40_3917 NZ_CP008943.1 Protein Homology CDS 4393957 4396026 . - 0 ID=cds3859;Parent=gene3966;Dbxref=Genbank:WP_002209716.1;Name=WP_002209716.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_002209716.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4396198 4397421 . + . ID=gene3967;Name=DJ40_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19925;old_locus_tag=DJ40_3918 NZ_CP008943.1 Protein Homology CDS 4396198 4397421 . + 0 ID=cds3860;Parent=gene3967;Dbxref=Genbank:WP_011192688.1;Name=WP_011192688.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_011192688.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4397484 4397658 . + . ID=id324;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4397828 4398523 . - . ID=gene3968;Name=DJ40_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19930;old_locus_tag=DJ40_3919 NZ_CP008943.1 Protein Homology CDS 4397828 4398523 . - 0 ID=cds3861;Parent=gene3968;Dbxref=Genbank:WP_038401339.1;Name=WP_038401339.1;gbkey=CDS;product=aspartate racemase;protein_id=WP_038401339.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4398675 4399842 . + . ID=id325;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4399311 4399841 . + . ID=gene3969;Name=DJ40_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19935;old_locus_tag=DJ40_3920 NZ_CP008943.1 Protein Homology CDS 4399311 4399841 . + 0 ID=cds3862;Parent=gene3969;Dbxref=Genbank:WP_011192686.1;Name=WP_011192686.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_011192686.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4400102 4400273 . + . ID=id326;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4400368 4401405 . - . ID=gene3970;Name=DJ40_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19940;old_locus_tag=DJ40_3921 NZ_CP008943.1 Protein Homology CDS 4400368 4401405 . - 0 ID=cds3863;Parent=gene3970;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4401690 4402607 . - . ID=gene3971;Name=DJ40_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19945;old_locus_tag=DJ40_3922 NZ_CP008943.1 Protein Homology CDS 4401690 4402607 . - 0 ID=cds3864;Parent=gene3971;Dbxref=Genbank:WP_024063259.1;Name=WP_024063259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063259.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4402685 4402846 . + . ID=gene3972;Name=DJ40_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19950 NZ_CP008943.1 Protein Homology CDS 4402685 4402846 . + 0 ID=cds3865;Parent=gene3972;Dbxref=Genbank:WP_032466527.1;Name=WP_032466527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466527.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4402833 4403618 . + . ID=gene3973;Name=DJ40_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19955;old_locus_tag=DJ40_3923 NZ_CP008943.1 Protein Homology CDS 4402833 4403618 . + 0 ID=cds3866;Parent=gene3973;Dbxref=Genbank:WP_011192684.1;Name=WP_011192684.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_011192684.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4403665 4404792 . + . ID=gene3974;Name=DJ40_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19960;old_locus_tag=DJ40_3924 NZ_CP008943.1 Protein Homology CDS 4403665 4404792 . + 0 ID=cds3867;Parent=gene3974;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4404962 4405972 . + . ID=gene3975;Name=DJ40_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19965;old_locus_tag=DJ40_3925 NZ_CP008943.1 Protein Homology CDS 4404962 4405972 . + 0 ID=cds3868;Parent=gene3975;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4406041 4406871 . + . ID=gene3976;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=DJ40_RS19970;old_locus_tag=DJ40_3926 NZ_CP008943.1 Protein Homology CDS 4406041 4406871 . + 0 ID=cds3869;Parent=gene3976;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4407028 4407690 . + . ID=gene3977;Name=DJ40_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19975;old_locus_tag=DJ40_3927 NZ_CP008943.1 Protein Homology CDS 4407028 4407690 . + 0 ID=cds3870;Parent=gene3977;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4407921 4408835 . + . ID=gene3978;Name=DJ40_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19980;old_locus_tag=DJ40_3928 NZ_CP008943.1 Protein Homology CDS 4407921 4408835 . + 0 ID=cds3871;Parent=gene3978;Dbxref=Genbank:WP_002209729.1;Name=WP_002209729.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4409084 4410388 . + . ID=gene3979;Name=DJ40_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19985;old_locus_tag=DJ40_3929 NZ_CP008943.1 Protein Homology CDS 4409084 4410388 . + 0 ID=cds3872;Parent=gene3979;Dbxref=Genbank:WP_038401341.1;Name=WP_038401341.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_038401341.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4410508 4411230 . + . ID=gene3980;Name=DJ40_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19990;old_locus_tag=DJ40_3930 NZ_CP008943.1 Protein Homology CDS 4410508 4411230 . + 0 ID=cds3873;Parent=gene3980;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4411527 4412036 . + . ID=gene3981;Name=DJ40_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS19995;old_locus_tag=DJ40_3931 NZ_CP008943.1 Protein Homology CDS 4411527 4412036 . + 0 ID=cds3874;Parent=gene3981;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4412049 4413566 . + . ID=gene3982;Name=DJ40_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20000;old_locus_tag=DJ40_3932 NZ_CP008943.1 Protein Homology CDS 4412049 4413566 . + 0 ID=cds3875;Parent=gene3982;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4413828 4414400 . + . ID=gene3983;Name=DJ40_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20005;old_locus_tag=DJ40_3933 NZ_CP008943.1 Protein Homology CDS 4413828 4414400 . + 0 ID=cds3876;Parent=gene3983;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4414913 4415695 . + . ID=gene3984;Name=DJ40_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20010;old_locus_tag=DJ40_3934 NZ_CP008943.1 Protein Homology CDS 4414913 4415695 . + 0 ID=cds3877;Parent=gene3984;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4415791 4416477 . + . ID=gene3985;Name=DJ40_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20015;old_locus_tag=DJ40_3935 NZ_CP008943.1 Protein Homology CDS 4415791 4416477 . + 0 ID=cds3878;Parent=gene3985;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4416474 4417190 . + . ID=gene3986;Name=DJ40_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20020;old_locus_tag=DJ40_3936 NZ_CP008943.1 Protein Homology CDS 4416474 4417190 . + 0 ID=cds3879;Parent=gene3986;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4417204 4418001 . + . ID=gene3987;Name=DJ40_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20025;old_locus_tag=DJ40_3937 NZ_CP008943.1 Protein Homology CDS 4417204 4418001 . + 0 ID=cds3880;Parent=gene3987;Dbxref=Genbank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_002209738.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4418125 4419033 . - . ID=gene3988;Name=DJ40_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20030;old_locus_tag=DJ40_3938 NZ_CP008943.1 Protein Homology CDS 4418125 4419033 . - 0 ID=cds3881;Parent=gene3988;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4419387 4420079 . + . ID=gene3989;Name=DJ40_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20035;old_locus_tag=DJ40_3939 NZ_CP008943.1 Protein Homology CDS 4419387 4420079 . + 0 ID=cds3882;Parent=gene3989;Dbxref=Genbank:WP_012303928.1;Name=WP_012303928.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_012303928.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4420267 4420818 . + . ID=gene3990;Name=DJ40_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20040;old_locus_tag=DJ40_3940 NZ_CP008943.1 Protein Homology CDS 4420267 4420818 . + 0 ID=cds3883;Parent=gene3990;Dbxref=Genbank:WP_002264676.1;Name=WP_002264676.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002264676.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4421040 4421588 . + . ID=gene3991;Name=DJ40_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20045;old_locus_tag=DJ40_3941 NZ_CP008943.1 Protein Homology CDS 4421040 4421588 . + 0 ID=cds3884;Parent=gene3991;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4421705 4422961 . - . ID=gene3992;Name=DJ40_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20050;old_locus_tag=DJ40_3942 NZ_CP008943.1 Protein Homology CDS 4421705 4422961 . - 0 ID=cds3885;Parent=gene3992;Dbxref=Genbank:WP_002222248.1;Name=WP_002222248.1;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;protein_id=WP_002222248.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4422974 4423261 . - . ID=gene3993;Name=DJ40_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20055;old_locus_tag=DJ40_3943 NZ_CP008943.1 Protein Homology CDS 4422974 4423261 . - 0 ID=cds3886;Parent=gene3993;Dbxref=Genbank:WP_002264679.1;Name=WP_002264679.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002264679.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4423430 4423873 . - . ID=gene3994;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=DJ40_RS20060;old_locus_tag=DJ40_3944 NZ_CP008943.1 Protein Homology CDS 4423430 4423873 . - 0 ID=cds3887;Parent=gene3994;Dbxref=Genbank:WP_011192680.1;Name=WP_011192680.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_011192680.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4424240 4425274 . + . ID=gene3995;Name=DJ40_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20065;old_locus_tag=DJ40_3945 NZ_CP008943.1 Protein Homology CDS 4424240 4425274 . + 0 ID=cds3888;Parent=gene3995;Dbxref=Genbank:WP_011192679.1;Name=WP_011192679.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011192679.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4425353 4425526 . + . ID=id327;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4425540 4427678 . - . ID=gene3996;Name=DJ40_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20070;old_locus_tag=DJ40_3946 NZ_CP008943.1 Protein Homology CDS 4425540 4427678 . - 0 ID=cds3889;Parent=gene3996;Dbxref=Genbank:WP_038401345.1;Name=WP_038401345.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_038401345.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4427861 4429063 . - . ID=gene3997;Name=DJ40_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20075;old_locus_tag=DJ40_3947 NZ_CP008943.1 Protein Homology CDS 4427861 4429063 . - 0 ID=cds3890;Parent=gene3997;Dbxref=Genbank:WP_011192678.1;Name=WP_011192678.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_011192678.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4429053 4429244 . - . ID=gene3998;Name=DJ40_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20080 NZ_CP008943.1 Protein Homology CDS 4429053 4429244 . - 0 ID=cds3891;Parent=gene3998;Dbxref=Genbank:WP_011192677.1;Name=WP_011192677.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192677.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4429485 4429940 . + . ID=gene3999;Name=DJ40_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20085;old_locus_tag=DJ40_3948 NZ_CP008943.1 Protein Homology CDS 4429485 4429940 . + 0 ID=cds3892;Parent=gene3999;Dbxref=Genbank:WP_011192676.1;Name=WP_011192676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192676.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4430256 4430750 . + . ID=gene4000;Name=DJ40_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20090;old_locus_tag=DJ40_3949 NZ_CP008943.1 Protein Homology CDS 4430256 4430750 . + 0 ID=cds3893;Parent=gene4000;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4430915 4431571 . + . ID=gene4001;Name=DJ40_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20095;old_locus_tag=DJ40_3950 NZ_CP008943.1 Protein Homology CDS 4430915 4431571 . + 0 ID=cds3894;Parent=gene4001;Dbxref=Genbank:WP_011192675.1;Name=WP_011192675.1;gbkey=CDS;product=phosphatase;protein_id=WP_011192675.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4431863 4433695 . + . ID=gene4002;Name=DJ40_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20100;old_locus_tag=DJ40_3951 NZ_CP008943.1 Protein Homology CDS 4431863 4433695 . + 0 ID=cds3895;Parent=gene4002;Dbxref=Genbank:WP_012303929.1;Name=WP_012303929.1;gbkey=CDS;product=citrate transporter;protein_id=WP_012303929.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4434169 4434360 . + . ID=gene4003;Name=DJ40_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20105 NZ_CP008943.1 Protein Homology CDS 4434169 4434360 . + 0 ID=cds3896;Parent=gene4003;Dbxref=Genbank:WP_038401858.1;Name=WP_038401858.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401858.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4434407 4435000 . - . ID=gene4004;Name=DJ40_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20110;old_locus_tag=DJ40_3953 NZ_CP008943.1 Protein Homology CDS 4434407 4435000 . - 0 ID=cds3897;Parent=gene4004;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4435151 4436365 . - . ID=gene4005;Name=DJ40_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20115;old_locus_tag=DJ40_3954 NZ_CP008943.1 Protein Homology CDS 4435151 4436365 . - 0 ID=cds3898;Parent=gene4005;Dbxref=Genbank:WP_011192671.1;Name=WP_011192671.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase AlaT;protein_id=WP_011192671.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4436498 4436770 . + . ID=gene4006;Name=DJ40_RS20120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS20120;pseudo=true NZ_CP008943.1 Protein Homology CDS 4436498 4436770 . + 0 ID=cds3899;Parent=gene4006;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4436504..4436506%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 4437222 4438154 . + . ID=gene4007;Name=DJ40_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20125;old_locus_tag=DJ40_3955 NZ_CP008943.1 Protein Homology CDS 4437222 4438154 . + 0 ID=cds3900;Parent=gene4007;Dbxref=Genbank:WP_002210280.1;Name=WP_002210280.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210280.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4438832 4439332 . + . ID=gene4008;Name=DJ40_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20130;old_locus_tag=DJ40_3956 NZ_CP008943.1 Protein Homology CDS 4438832 4439332 . + 0 ID=cds3901;Parent=gene4008;Dbxref=Genbank:WP_002210279.1;Name=WP_002210279.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4439434 4440111 . + . ID=gene4009;Name=DJ40_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20135;old_locus_tag=DJ40_3957 NZ_CP008943.1 Protein Homology CDS 4439434 4440111 . + 0 ID=cds3902;Parent=gene4009;Dbxref=Genbank:WP_002210278.1;Name=WP_002210278.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002210278.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4440254 4442050 . + . ID=gene4010;Name=DJ40_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20140;old_locus_tag=DJ40_3958 NZ_CP008943.1 Protein Homology CDS 4440254 4442050 . + 0 ID=cds3903;Parent=gene4010;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4442053 4442616 . + . ID=gene4011;Name=DJ40_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20145;old_locus_tag=DJ40_3959 NZ_CP008943.1 Protein Homology CDS 4442053 4442616 . + 0 ID=cds3904;Parent=gene4011;Dbxref=Genbank:WP_011192670.1;Name=WP_011192670.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_011192670.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4442613 4443998 . + . ID=gene4012;Name=DJ40_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20150;old_locus_tag=DJ40_3960 NZ_CP008943.1 Protein Homology CDS 4442613 4443998 . + 0 ID=cds3905;Parent=gene4012;Dbxref=Genbank:WP_002210276.1;Name=WP_002210276.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_002210276.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4444085 4446829 . + . ID=gene4013;Name=DJ40_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20155;old_locus_tag=DJ40_3961 NZ_CP008943.1 Protein Homology CDS 4444085 4446829 . + 0 ID=cds3906;Parent=gene4013;Dbxref=Genbank:WP_012303931.1;Name=WP_012303931.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit G;protein_id=WP_012303931.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4446826 4447803 . + . ID=gene4014;Name=DJ40_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20160;old_locus_tag=DJ40_3962 NZ_CP008943.1 Protein Homology CDS 4446826 4447803 . + 0 ID=cds3907;Parent=gene4014;Dbxref=Genbank:WP_038401347.1;Name=WP_038401347.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase;protein_id=WP_038401347.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4447818 4448360 . + . ID=gene4015;Name=DJ40_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20165;old_locus_tag=DJ40_3963 NZ_CP008943.1 Protein Homology CDS 4447818 4448360 . + 0 ID=cds3908;Parent=gene4015;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4448373 4448918 . + . ID=gene4016;Name=DJ40_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20170;old_locus_tag=DJ40_3964 NZ_CP008943.1 Protein Homology CDS 4448373 4448918 . + 0 ID=cds3909;Parent=gene4016;Dbxref=Genbank:WP_032466523.1;Name=WP_032466523.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_032466523.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4448915 4449217 . + . ID=gene4017;Name=DJ40_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20175;old_locus_tag=DJ40_3965 NZ_CP008943.1 Protein Homology CDS 4448915 4449217 . + 0 ID=cds3910;Parent=gene4017;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4449214 4451058 . + . ID=gene4018;Name=DJ40_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20180;old_locus_tag=DJ40_3966 NZ_CP008943.1 Protein Homology CDS 4449214 4451058 . + 0 ID=cds3911;Parent=gene4018;Dbxref=Genbank:WP_032466522.1;Name=WP_032466522.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_032466522.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4451098 4452630 . + . ID=gene4019;Name=DJ40_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20185;old_locus_tag=DJ40_3967 NZ_CP008943.1 Protein Homology CDS 4451098 4452630 . + 0 ID=cds3912;Parent=gene4019;Dbxref=Genbank:WP_002210269.1;Name=WP_002210269.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4452637 4454100 . + . ID=gene4020;Name=DJ40_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20190;old_locus_tag=DJ40_3968 NZ_CP008943.1 Protein Homology CDS 4452637 4454100 . + 0 ID=cds3913;Parent=gene4020;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4454347 4455615 . + . ID=gene4021;Name=DJ40_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20195;old_locus_tag=DJ40_3969 NZ_CP008943.1 Protein Homology CDS 4454347 4455615 . + 0 ID=cds3914;Parent=gene4021;Dbxref=Genbank:WP_042592798.1;Name=WP_042592798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042592798.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4455979 4456446 . - . ID=gene4022;Name=DJ40_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20200;old_locus_tag=DJ40_3970 NZ_CP008943.1 Protein Homology CDS 4455979 4456446 . - 0 ID=cds3915;Parent=gene4022;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4456524 4457060 . - . ID=gene4023;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=DJ40_RS20205;old_locus_tag=DJ40_3971 NZ_CP008943.1 Protein Homology CDS 4456524 4457060 . - 0 ID=cds3916;Parent=gene4023;Dbxref=Genbank:WP_002210265.1;Name=WP_002210265.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_002210265.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4457109 4457873 . - . ID=gene4024;Name=DJ40_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20210;old_locus_tag=DJ40_3972 NZ_CP008943.1 Protein Homology CDS 4457109 4457873 . - 0 ID=cds3917;Parent=gene4024;Dbxref=Genbank:WP_011192664.1;Name=WP_011192664.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_011192664.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4457902 4458077 . + . ID=id328;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4458632 4459915 . - . ID=gene4025;Name=DJ40_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20215;old_locus_tag=DJ40_3973 NZ_CP008943.1 Protein Homology CDS 4458632 4459915 . - 0 ID=cds3918;Parent=gene4025;Dbxref=Genbank:WP_038401349.1;Name=WP_038401349.1;gbkey=CDS;product=glycoside hydrolase;protein_id=WP_038401349.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4460384 4461376 . + . ID=gene4026;Name=DJ40_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20220;old_locus_tag=DJ40_3974 NZ_CP008943.1 Protein Homology CDS 4460384 4461376 . + 0 ID=cds3919;Parent=gene4026;Dbxref=Genbank:WP_038401351.1;Name=WP_038401351.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038401351.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4461701 4461821 . + . ID=gene4027;Name=DJ40_RS20225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS20225;pseudo=true NZ_CP008943.1 Protein Homology CDS 4461701 4461821 . + 0 ID=cds3920;Parent=gene4027;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4461840 4462790 . + . ID=gene4028;Name=DJ40_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20230;old_locus_tag=DJ40_3975 NZ_CP008943.1 Protein Homology CDS 4461840 4462790 . + 0 ID=cds3921;Parent=gene4028;Dbxref=Genbank:WP_038401353.1;Name=WP_038401353.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_038401353.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4463153 4464469 . + . ID=gene4029;Name=DJ40_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20235;old_locus_tag=DJ40_3976 NZ_CP008943.1 Protein Homology CDS 4463153 4464469 . + 0 ID=cds3922;Parent=gene4029;Dbxref=Genbank:WP_038401355.1;Name=WP_038401355.1;gbkey=CDS;product=2-ketogluconate transporter;protein_id=WP_038401355.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4464499 4465014 . + . ID=gene4030;Name=DJ40_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20240;old_locus_tag=DJ40_3977 NZ_CP008943.1 Protein Homology CDS 4464499 4465014 . + 0 ID=cds3923;Parent=gene4030;Dbxref=Genbank:WP_011192659.1;Name=WP_011192659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192659.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4465024 4466940 . + . ID=gene4031;Name=DJ40_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20245;old_locus_tag=DJ40_3978 NZ_CP008943.1 Protein Homology CDS 4465024 4466940 . + 0 ID=cds3924;Parent=gene4031;Dbxref=Genbank:WP_038401357.1;Name=WP_038401357.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_038401357.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4467006 4467218 . + . ID=gene4032;Name=DJ40_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20250 NZ_CP008943.1 Protein Homology CDS 4467006 4467218 . + 0 ID=cds3925;Parent=gene4032;Dbxref=Genbank:WP_038401359.1;Name=WP_038401359.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401359.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4467159 4467302 . - . ID=gene4033;Name=DJ40_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20255;old_locus_tag=DJ40_3979 NZ_CP008943.1 Protein Homology CDS 4467159 4467302 . - 0 ID=cds3926;Parent=gene4033;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4467869 4468177 . + . ID=gene4034;Name=DJ40_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20260;old_locus_tag=DJ40_3980 NZ_CP008943.1 Protein Homology CDS 4467869 4468177 . + 0 ID=cds3927;Parent=gene4034;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4468732 4469376 . + . ID=gene4035;Name=DJ40_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20265;old_locus_tag=DJ40_3981 NZ_CP008943.1 Protein Homology CDS 4468732 4469376 . + 0 ID=cds3928;Parent=gene4035;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4469921 4471288 . + . ID=gene4036;Name=DJ40_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20270;old_locus_tag=DJ40_3982 NZ_CP008943.1 Protein Homology CDS 4469921 4471288 . + 0 ID=cds3929;Parent=gene4036;Dbxref=Genbank:WP_011192657.1;Name=WP_011192657.1;gbkey=CDS;product=isochorismate synthase;protein_id=WP_011192657.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4471516 4473219 . + . ID=gene4037;Name=DJ40_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20275;old_locus_tag=DJ40_3983 NZ_CP008943.1 Protein Homology CDS 4471516 4473219 . + 0 ID=cds3930;Parent=gene4037;Dbxref=Genbank:WP_011192656.1;Name=WP_011192656.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_011192656.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4473216 4474034 . + . ID=gene4038;Name=DJ40_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20280;old_locus_tag=DJ40_3984 NZ_CP008943.1 Protein Homology CDS 4473216 4474034 . + 0 ID=cds3931;Parent=gene4038;Dbxref=Genbank:WP_011192655.1;Name=WP_011192655.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_011192655.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4474048 4474905 . + . ID=gene4039;Name=DJ40_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20285;old_locus_tag=DJ40_3985 NZ_CP008943.1 Protein Homology CDS 4474048 4474905 . + 0 ID=cds3932;Parent=gene4039;Dbxref=Genbank:WP_002210245.1;Name=WP_002210245.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=naphthoate synthase;protein_id=WP_002210245.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4474905 4475876 . + . ID=gene4040;Name=DJ40_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20290;old_locus_tag=DJ40_3986 NZ_CP008943.1 Protein Homology CDS 4474905 4475876 . + 0 ID=cds3933;Parent=gene4040;Dbxref=Genbank:WP_012413803.1;Name=WP_012413803.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_012413803.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4475864 4477279 . + . ID=gene4041;Name=DJ40_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20295;old_locus_tag=DJ40_3987 NZ_CP008943.1 Protein Homology CDS 4475864 4477279 . + 0 ID=cds3934;Parent=gene4041;Dbxref=Genbank:WP_038401361.1;Name=WP_038401361.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_038401361.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4477345 4478304 . + . ID=gene4042;Name=DJ40_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20300;old_locus_tag=DJ40_3988 NZ_CP008943.1 Protein Homology CDS 4477345 4478304 . + 0 ID=cds3935;Parent=gene4042;Dbxref=Genbank:WP_011192652.1;Name=WP_011192652.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_011192652.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4478349 4478522 . + . ID=id329;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4478686 4478946 . - . ID=gene4043;Name=DJ40_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20305;old_locus_tag=DJ40_3989 NZ_CP008943.1 Protein Homology CDS 4478686 4478946 . - 0 ID=cds3936;Parent=gene4043;Dbxref=Genbank:WP_002210240.1;Name=WP_002210240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210240.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4479234 4480244 . + . ID=gene4044;Name=DJ40_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20310;old_locus_tag=DJ40_3990 NZ_CP008943.1 Protein Homology CDS 4479234 4480244 . + 0 ID=cds3937;Parent=gene4044;Dbxref=Genbank:WP_038401363.1;Name=WP_038401363.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_038401363.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4480779 4480953 . + . ID=id330;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4481031 4482335 . + . ID=gene4045;Name=DJ40_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20315;old_locus_tag=DJ40_3991 NZ_CP008943.1 Protein Homology CDS 4481031 4482335 . + 0 ID=cds3938;Parent=gene4045;Dbxref=Genbank:WP_038401365.1;Name=WP_038401365.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_038401365.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4482563 4483285 . - . ID=gene4046;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=DJ40_RS20320;old_locus_tag=DJ40_3992 NZ_CP008943.1 Protein Homology CDS 4482563 4483285 . - 0 ID=cds3939;Parent=gene4046;Dbxref=Genbank:WP_038401368.1;Name=WP_038401368.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_038401368.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4483282 4483938 . - . ID=gene4047;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=DJ40_RS20325;old_locus_tag=DJ40_3993 NZ_CP008943.1 Protein Homology CDS 4483282 4483938 . - 0 ID=cds3940;Parent=gene4047;Dbxref=Genbank:WP_002210236.1;Name=WP_002210236.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_002210236.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4483973 4484716 . - . ID=gene4048;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=DJ40_RS20330;old_locus_tag=DJ40_3994 NZ_CP008943.1 Protein Homology CDS 4483973 4484716 . - 0 ID=cds3941;Parent=gene4048;Dbxref=Genbank:WP_038401371.1;Name=WP_038401371.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-bindnig protein;protein_id=WP_038401371.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4485286 4486413 . - . ID=gene4049;Name=DJ40_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20335;old_locus_tag=DJ40_3995 NZ_CP008943.1 Protein Homology CDS 4485286 4486413 . - 0 ID=cds3942;Parent=gene4049;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4486734 4487237 . - . ID=gene4050;Name=DJ40_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20340;old_locus_tag=DJ40_3996 NZ_CP008943.1 Protein Homology CDS 4486734 4487237 . - 0 ID=cds3943;Parent=gene4050;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4487494 4488270 . - . ID=gene4051;Name=DJ40_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20345;old_locus_tag=DJ40_3997 NZ_CP008943.1 Protein Homology CDS 4487494 4488270 . - 0 ID=cds3944;Parent=gene4051;Dbxref=Genbank:WP_038401373.1;Name=WP_038401373.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_038401373.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4488293 4488790 . - . ID=gene4052;Name=DJ40_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20350;old_locus_tag=DJ40_3998 NZ_CP008943.1 Protein Homology CDS 4488293 4488790 . - 0 ID=cds3945;Parent=gene4052;Dbxref=Genbank:WP_038401376.1;Name=WP_038401376.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_038401376.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4488806 4489693 . - . ID=gene4053;Name=DJ40_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20355;old_locus_tag=DJ40_3999 NZ_CP008943.1 Protein Homology CDS 4488806 4489693 . - 0 ID=cds3946;Parent=gene4053;Dbxref=Genbank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002213809.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4490098 4490622 . + . ID=gene4054;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=DJ40_RS20360;old_locus_tag=DJ40_4000 NZ_CP008943.1 Protein Homology CDS 4490098 4490622 . + 0 ID=cds3947;Parent=gene4054;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4490938 4491876 . + . ID=gene4055;Name=DJ40_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20365;old_locus_tag=DJ40_4001 NZ_CP008943.1 Protein Homology CDS 4490938 4491876 . + 0 ID=cds3948;Parent=gene4055;Dbxref=Genbank:WP_011192647.1;Name=WP_011192647.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_011192647.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4492114 4492686 . + . ID=gene4056;Name=DJ40_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20370;old_locus_tag=DJ40_4002 NZ_CP008943.1 Protein Homology CDS 4492114 4492686 . + 0 ID=cds3949;Parent=gene4056;Dbxref=Genbank:WP_011192646.1;Name=WP_011192646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192646.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4492869 4493531 . + . ID=gene4057;Name=DJ40_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20375;old_locus_tag=DJ40_4003 NZ_CP008943.1 Protein Homology CDS 4492869 4493531 . + 0 ID=cds3950;Parent=gene4057;Dbxref=Genbank:WP_011192645.1;Name=WP_011192645.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192645.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4494338 4495405 . + . ID=gene4058;Name=DJ40_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20380;old_locus_tag=DJ40_4004 NZ_CP008943.1 Protein Homology CDS 4494338 4495405 . + 0 ID=cds3951;Parent=gene4058;Dbxref=Genbank:WP_038401864.1;Name=WP_038401864.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_038401864.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4495580 4496497 . + . ID=gene4059;Name=DJ40_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20385;old_locus_tag=DJ40_4005 NZ_CP008943.1 Protein Homology CDS 4495580 4496497 . + 0 ID=cds3952;Parent=gene4059;Dbxref=Genbank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210223.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4496554 4498044 . + . ID=gene4060;Name=DJ40_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20390;old_locus_tag=DJ40_4006 NZ_CP008943.1 Protein Homology CDS 4496554 4498044 . + 0 ID=cds3953;Parent=gene4060;Dbxref=Genbank:WP_012104931.1;Name=WP_012104931.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_012104931.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4498041 4499033 . + . ID=gene4061;Name=DJ40_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20395;old_locus_tag=DJ40_4007 NZ_CP008943.1 Protein Homology CDS 4498041 4499033 . + 0 ID=cds3954;Parent=gene4061;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4499166 4500170 . - . ID=gene4062;Name=DJ40_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20400;old_locus_tag=DJ40_4008 NZ_CP008943.1 Protein Homology CDS 4499166 4500170 . - 0 ID=cds3955;Parent=gene4062;Dbxref=Genbank:WP_011192641.1;Name=WP_011192641.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_011192641.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4500237 4500368 . + . ID=id331;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4500541 4501482 . - . ID=gene4063;Name=DJ40_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20405;old_locus_tag=DJ40_4009 NZ_CP008943.1 Protein Homology CDS 4500541 4501482 . - 0 ID=cds3956;Parent=gene4063;Dbxref=Genbank:WP_011192640.1;Name=WP_011192640.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_011192640.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4501585 4502670 . + . ID=gene4064;Name=DJ40_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20410;old_locus_tag=DJ40_4010 NZ_CP008943.1 Protein Homology CDS 4501585 4502670 . + 0 ID=cds3957;Parent=gene4064;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4502704 4502880 . + . ID=id332;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4503287 4504933 . + . ID=gene4065;Name=DJ40_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20415;old_locus_tag=DJ40_4011 NZ_CP008943.1 Protein Homology CDS 4503287 4504933 . + 0 ID=cds3958;Parent=gene4065;Dbxref=Genbank:WP_038401378.1;Name=WP_038401378.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_038401378.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4505050 4506174 . + . ID=gene4066;Name=DJ40_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20420;old_locus_tag=DJ40_4012 NZ_CP008943.1 Protein Homology CDS 4505050 4506174 . + 0 ID=cds3959;Parent=gene4066;Dbxref=Genbank:WP_002213815.1;Name=WP_002213815.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002213815.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4506270 4507235 . + . ID=gene4067;Name=DJ40_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20425;old_locus_tag=DJ40_4013 NZ_CP008943.1 Protein Homology CDS 4506270 4507235 . + 0 ID=cds3960;Parent=gene4067;Dbxref=Genbank:WP_038401380.1;Name=WP_038401380.1;gbkey=CDS;product=dioxygenase;protein_id=WP_038401380.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4507887 4509575 . + . ID=gene4068;Name=DJ40_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20430;old_locus_tag=DJ40_4014 NZ_CP008943.1 Protein Homology CDS 4507887 4509575 . + 0 ID=cds3961;Parent=gene4068;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4509730 4517326 . + . ID=gene4069;Name=DJ40_RS21940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21940;old_locus_tag=DJ40_4015;pseudo=true NZ_CP008943.1 Protein Homology CDS 4509730 4517326 . + 0 ID=cds3962;Parent=gene4069;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemagglutinin;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4515387 4516711 . + . ID=id333;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4517328 4517837 . + . ID=gene4070;Name=DJ40_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20445;old_locus_tag=DJ40_4017 NZ_CP008943.1 Protein Homology CDS 4517328 4517837 . + 0 ID=cds3963;Parent=gene4070;Dbxref=Genbank:WP_002210211.1;Name=WP_002210211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210211.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4518082 4518333 . + . ID=gene4071;Name=DJ40_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20450;old_locus_tag=DJ40_4018 NZ_CP008943.1 Protein Homology CDS 4518082 4518333 . + 0 ID=cds3964;Parent=gene4071;Dbxref=Genbank:WP_011192636.1;Name=WP_011192636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192636.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4518474 4518821 . + . ID=gene4072;Name=DJ40_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20455 NZ_CP008943.1 Protein Homology CDS 4518474 4518821 . + 0 ID=cds3965;Parent=gene4072;Dbxref=Genbank:WP_024063279.1;Name=WP_024063279.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024063279.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4518944 4520274 . + . ID=id334;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4519003 4520460 . + . ID=gene4073;Name=DJ40_RS20460;end_range=4520460,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS20460;old_locus_tag=DJ40_4019;partial=true;pseudo=true NZ_CP008943.1 Protein Homology CDS 4519003 4520460 . + 0 ID=cds3966;Parent=gene4073;end_range=4520460,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hemagglutinin;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4520621 4521073 . + . ID=gene4074;Name=DJ40_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20465;old_locus_tag=DJ40_4020 NZ_CP008943.1 Protein Homology CDS 4520621 4521073 . + 0 ID=cds3967;Parent=gene4074;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4521338 4522417 . - . ID=gene4075;Name=DJ40_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20470;old_locus_tag=DJ40_4021 NZ_CP008943.1 Protein Homology CDS 4521338 4522417 . - 0 ID=cds3968;Parent=gene4075;Dbxref=Genbank:WP_011192635.1;Name=WP_011192635.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192635.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4522517 4523905 . - . ID=gene4076;Name=DJ40_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20475;old_locus_tag=DJ40_4022 NZ_CP008943.1 Protein Homology CDS 4522517 4523905 . - 0 ID=cds3969;Parent=gene4076;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4523922 4524962 . - . ID=gene4077;Name=DJ40_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20480;old_locus_tag=DJ40_4023 NZ_CP008943.1 Protein Homology CDS 4523922 4524962 . - 0 ID=cds3970;Parent=gene4077;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4525234 4526520 . + . ID=gene4078;Name=DJ40_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20485;old_locus_tag=DJ40_4024 NZ_CP008943.1 Protein Homology CDS 4525234 4526520 . + 0 ID=cds3971;Parent=gene4078;Dbxref=Genbank:WP_002210199.1;Name=WP_002210199.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002210199.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4526629 4527504 . + . ID=gene4079;Name=DJ40_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20490;old_locus_tag=DJ40_4025 NZ_CP008943.1 Protein Homology CDS 4526629 4527504 . + 0 ID=cds3972;Parent=gene4079;Dbxref=Genbank:WP_012104939.1;Name=WP_012104939.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_012104939.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4527505 4528329 . + . ID=gene4080;Name=DJ40_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20495;old_locus_tag=DJ40_4026 NZ_CP008943.1 Protein Homology CDS 4527505 4528329 . + 0 ID=cds3973;Parent=gene4080;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4528476 4529531 . + . ID=gene4081;Name=DJ40_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20500;old_locus_tag=DJ40_4027 NZ_CP008943.1 Protein Homology CDS 4528476 4529531 . + 0 ID=cds3974;Parent=gene4081;Dbxref=Genbank:WP_011192632.1;Name=WP_011192632.1;gbkey=CDS;product=glycosidase;protein_id=WP_011192632.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4529558 4530496 . + . ID=gene4082;Name=DJ40_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20505;old_locus_tag=DJ40_4028 NZ_CP008943.1 Protein Homology CDS 4529558 4530496 . + 0 ID=cds3975;Parent=gene4082;Dbxref=Genbank:WP_038401387.1;Name=WP_038401387.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401387.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4530619 4531734 . + . ID=gene4083;Name=DJ40_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20510;old_locus_tag=DJ40_4029 NZ_CP008943.1 Protein Homology CDS 4530619 4531734 . + 0 ID=cds3976;Parent=gene4083;Dbxref=Genbank:WP_012104941.1;Name=WP_012104941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104941.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4531773 4533047 . + . ID=gene4084;Name=DJ40_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20515;old_locus_tag=DJ40_4030 NZ_CP008943.1 Protein Homology CDS 4531773 4533047 . + 0 ID=cds3977;Parent=gene4084;Dbxref=Genbank:WP_002210193.1;Name=WP_002210193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210193.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4533606 4534850 . - . ID=gene4085;Name=DJ40_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20520;old_locus_tag=DJ40_4031 NZ_CP008943.1 Protein Homology CDS 4533606 4534850 . - 0 ID=cds3978;Parent=gene4085;Dbxref=Genbank:WP_002210192.1;Name=WP_002210192.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_002210192.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4535188 4535876 . + . ID=id335;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4536236 4537216 . + . ID=gene4086;Name=DJ40_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20525;old_locus_tag=DJ40_4032 NZ_CP008943.1 Protein Homology CDS 4536236 4537216 . + 0 ID=cds3979;Parent=gene4086;Dbxref=Genbank:WP_012104943.1;Name=WP_012104943.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_012104943.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4537213 4540500 . + . ID=gene4087;Name=DJ40_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20530;old_locus_tag=DJ40_4033 NZ_CP008943.1 Protein Homology CDS 4537213 4540500 . + 0 ID=cds3980;Parent=gene4087;Dbxref=Genbank:WP_038401388.1;Name=WP_038401388.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_038401388.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4540656 4542002 . + . ID=gene4088;Name=DJ40_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20535;old_locus_tag=DJ40_4034 NZ_CP008943.1 Protein Homology CDS 4540656 4542002 . + 0 ID=cds3981;Parent=gene4088;Dbxref=Genbank:WP_012303963.1;Name=WP_012303963.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_012303963.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4541999 4542949 . + . ID=gene4089;Name=DJ40_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20540;old_locus_tag=DJ40_4035 NZ_CP008943.1 Protein Homology CDS 4541999 4542949 . + 0 ID=cds3982;Parent=gene4089;Dbxref=Genbank:WP_038401390.1;Name=WP_038401390.1;gbkey=CDS;product=CRISPR type I-F system protein Csy2;protein_id=WP_038401390.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4542967 4543971 . + . ID=gene4090;Name=DJ40_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20545;old_locus_tag=DJ40_4036 NZ_CP008943.1 Protein Homology CDS 4542967 4543971 . + 0 ID=cds3983;Parent=gene4090;Dbxref=Genbank:WP_002211867.1;Name=WP_002211867.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_002211867.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4543982 4544536 . + . ID=gene4091;Name=DJ40_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20550;old_locus_tag=DJ40_4037 NZ_CP008943.1 Protein Homology CDS 4543982 4544536 . + 0 ID=cds3984;Parent=gene4091;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4544614 4545633 . - . ID=gene4092;Name=DJ40_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20555;old_locus_tag=DJ40_4038 NZ_CP008943.1 Protein Homology CDS 4544614 4545633 . - 0 ID=cds3985;Parent=gene4092;Dbxref=Genbank:WP_012104947.1;Name=WP_012104947.1;gbkey=CDS;product=NADP-dependent aryl-alcohol dehydrogenase;protein_id=WP_012104947.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4545644 4546147 . - . ID=gene4093;Name=DJ40_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20560;old_locus_tag=DJ40_4039 NZ_CP008943.1 Protein Homology CDS 4545644 4546147 . - 0 ID=cds3986;Parent=gene4093;Dbxref=Genbank:WP_011192622.1;Name=WP_011192622.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_011192622.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4546194 4547552 . - . ID=gene4094;Name=DJ40_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20565;old_locus_tag=DJ40_4040 NZ_CP008943.1 Protein Homology CDS 4546194 4547552 . - 0 ID=cds3987;Parent=gene4094;Dbxref=Genbank:WP_038401391.1;Name=WP_038401391.1;gbkey=CDS;product=MFS transporter;protein_id=WP_038401391.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4547676 4547885 . + . ID=gene4095;Name=DJ40_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20570;old_locus_tag=DJ40_4041 NZ_CP008943.1 Protein Homology CDS 4547676 4547885 . + 0 ID=cds3988;Parent=gene4095;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4548000 4548926 . + . ID=gene4096;Name=DJ40_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20575;old_locus_tag=DJ40_4042 NZ_CP008943.1 Protein Homology CDS 4548000 4548926 . + 0 ID=cds3989;Parent=gene4096;Dbxref=Genbank:WP_012104949.1;Name=WP_012104949.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_012104949.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4549412 4550149 . + . ID=gene4097;Name=DJ40_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20580;old_locus_tag=DJ40_4044 NZ_CP008943.1 Protein Homology CDS 4549412 4550149 . + 0 ID=cds3990;Parent=gene4097;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4550142 4550786 . - . ID=gene4098;Name=DJ40_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20585;old_locus_tag=DJ40_4043 NZ_CP008943.1 Protein Homology CDS 4550142 4550786 . - 0 ID=cds3991;Parent=gene4098;Dbxref=Genbank:WP_002211858.1;Name=WP_002211858.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4551217 4552143 . + . ID=gene4099;Name=DJ40_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20590;old_locus_tag=DJ40_4045 NZ_CP008943.1 Protein Homology CDS 4551217 4552143 . + 0 ID=cds3992;Parent=gene4099;Dbxref=Genbank:WP_012104952.1;Name=WP_012104952.1;gbkey=CDS;product=DMT superfamliy metabolite exporter;protein_id=WP_012104952.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4552275 4554002 . - . ID=gene4100;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=nhaP2,ycgO;locus_tag=DJ40_RS20595;old_locus_tag=DJ40_4046 NZ_CP008943.1 Protein Homology CDS 4552275 4554002 . - 0 ID=cds3993;Parent=gene4100;Dbxref=Genbank:WP_011192618.1;Name=WP_011192618.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=K+/H+ antiporter NhaP2;protein_id=WP_011192618.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4554346 4554591 . - . ID=gene4101;Name=DJ40_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20600;old_locus_tag=DJ40_4047 NZ_CP008943.1 Protein Homology CDS 4554346 4554591 . - 0 ID=cds3994;Parent=gene4101;Dbxref=Genbank:WP_011192617.1;Name=WP_011192617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192617.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4556053 4557607 . + . ID=gene4102;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=pseudogene;gene_synonym=opgG;locus_tag=DJ40_RS20605;pseudo=true NZ_CP008943.1 Protein Homology CDS 4556053 4557607 . + 0 ID=cds3995;Parent=gene4102;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=mdoG;product=glucan biosynthesis protein G;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq gene 4557600 4560209 . + . ID=gene4103;Name=DJ40_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20610;old_locus_tag=DJ40_4050 NZ_CP008943.1 Protein Homology CDS 4557600 4560209 . + 0 ID=cds3996;Parent=gene4103;Dbxref=Genbank:WP_012303969.1;Name=WP_012303969.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;gbkey=CDS;product=glucosyltransferase;protein_id=WP_012303969.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4560341 4560574 . + . ID=gene4104;Name=DJ40_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20615 NZ_CP008943.1 Protein Homology CDS 4560341 4560574 . + 0 ID=cds3997;Parent=gene4104;Dbxref=Genbank:WP_032466681.1;Name=WP_032466681.1;gbkey=CDS;product=lipoprotein;protein_id=WP_032466681.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4560753 4562291 . - . ID=gene4105;Name=DJ40_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20620;old_locus_tag=DJ40_4052 NZ_CP008943.1 Protein Homology CDS 4560753 4562291 . - 0 ID=cds3998;Parent=gene4105;Dbxref=Genbank:WP_011192613.1;Name=WP_011192613.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_011192613.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4563059 4563982 . - . ID=gene4106;Name=DJ40_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20625;old_locus_tag=DJ40_4053 NZ_CP008943.1 Protein Homology CDS 4563059 4563982 . - 0 ID=cds3999;Parent=gene4106;Dbxref=Genbank:WP_038401393.1;Name=WP_038401393.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=WP_038401393.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4564428 4564589 . + . ID=gene4107;Name=DJ40_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20630 NZ_CP008943.1 Protein Homology CDS 4564428 4564589 . + 0 ID=cds4000;Parent=gene4107;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4564919 4565083 . + . ID=gene4108;Name=DJ40_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20635;old_locus_tag=DJ40_4054 NZ_CP008943.1 Protein Homology CDS 4564919 4565083 . + 0 ID=cds4001;Parent=gene4108;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4565270 4565398 . + . ID=gene4109;Name=DJ40_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20640 NZ_CP008943.1 Protein Homology CDS 4565270 4565398 . + 0 ID=cds4002;Parent=gene4109;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4565442 4566509 . + . ID=gene4110;Name=DJ40_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20645;old_locus_tag=DJ40_4055 NZ_CP008943.1 Protein Homology CDS 4565442 4566509 . + 0 ID=cds4003;Parent=gene4110;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4566658 4567716 . + . ID=gene4111;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=DJ40_RS20650;old_locus_tag=DJ40_4056 NZ_CP008943.1 Protein Homology CDS 4566658 4567716 . + 0 ID=cds4004;Parent=gene4111;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4568288 4568872 . - . ID=gene4112;Name=DJ40_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20655;old_locus_tag=DJ40_4057 NZ_CP008943.1 Protein Homology CDS 4568288 4568872 . - 0 ID=cds4005;Parent=gene4112;Dbxref=Genbank:WP_002230951.1;Name=WP_002230951.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002230951.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4569139 4570254 . - . ID=gene4113;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=DJ40_RS20660;old_locus_tag=DJ40_4058 NZ_CP008943.1 Protein Homology CDS 4569139 4570254 . - 0 ID=cds4006;Parent=gene4113;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4570505 4570759 . - . ID=gene4114;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=DJ40_RS20665;old_locus_tag=DJ40_4059 NZ_CP008943.1 Protein Homology CDS 4570505 4570759 . - 0 ID=cds4007;Parent=gene4114;Dbxref=Genbank:WP_011192611.1;Name=WP_011192611.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_011192611.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4570938 4571066 . + . ID=gene4115;Name=DJ40_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20670 NZ_CP008943.1 Protein Homology CDS 4570938 4571066 . + 0 ID=cds4008;Parent=gene4115;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4571265 4571510 . - . ID=gene4116;Name=DJ40_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20675;old_locus_tag=DJ40_4060 NZ_CP008943.1 Protein Homology CDS 4571265 4571510 . - 0 ID=cds4009;Parent=gene4116;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4571823 4572869 . - . ID=gene4117;Name=DJ40_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20680;old_locus_tag=DJ40_4061 NZ_CP008943.1 Protein Homology CDS 4571823 4572869 . - 0 ID=cds4010;Parent=gene4117;Dbxref=Genbank:WP_012104959.1;Name=WP_012104959.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_012104959.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4573103 4573390 . + . ID=gene4118;Name=DJ40_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20685;old_locus_tag=DJ40_4062 NZ_CP008943.1 Protein Homology CDS 4573103 4573390 . + 0 ID=cds4011;Parent=gene4118;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4573648 4577271 . - . ID=gene4119;Name=DJ40_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20690;old_locus_tag=DJ40_4063 NZ_CP008943.1 Protein Homology CDS 4573648 4577271 . - 0 ID=cds4012;Parent=gene4119;Dbxref=Genbank:WP_038401395.1;Name=WP_038401395.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_038401395.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4577855 4578817 . + . ID=gene4120;Name=DJ40_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20695;old_locus_tag=DJ40_4064 NZ_CP008943.1 Protein Homology CDS 4577855 4578817 . + 0 ID=cds4013;Parent=gene4120;Dbxref=Genbank:WP_012303972.1;Name=WP_012303972.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=23S rRNA pseudouridylate synthase C;protein_id=WP_012303972.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4578940 4579536 . - . ID=gene4121;Name=DJ40_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20700;old_locus_tag=DJ40_4065 NZ_CP008943.1 Protein Homology CDS 4578940 4579536 . - 0 ID=cds4014;Parent=gene4121;Dbxref=Genbank:WP_038401397.1;Name=WP_038401397.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_038401397.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4579678 4580202 . + . ID=gene4122;Name=DJ40_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20705;old_locus_tag=DJ40_4066 NZ_CP008943.1 Protein Homology CDS 4579678 4580202 . + 0 ID=cds4015;Parent=gene4122;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4580215 4580382 . + . ID=gene4123;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=DJ40_RS20710;old_locus_tag=DJ40_4067 NZ_CP008943.1 Protein Homology CDS 4580215 4580382 . + 0 ID=cds4016;Parent=gene4123;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4580446 4581450 . + . ID=gene4124;Name=DJ40_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20715;old_locus_tag=DJ40_4068 NZ_CP008943.1 Protein Homology CDS 4580446 4581450 . + 0 ID=cds4017;Parent=gene4124;Dbxref=Genbank:WP_038401872.1;Name=WP_038401872.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_038401872.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4581457 4582407 . + . ID=gene4125;Name=DJ40_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20720;old_locus_tag=DJ40_4069 NZ_CP008943.1 Protein Homology CDS 4581457 4582407 . + 0 ID=cds4018;Parent=gene4125;Dbxref=Genbank:WP_038401398.1;Name=WP_038401398.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_038401398.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4582445 4583374 . + . ID=gene4126;Name=DJ40_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20725;old_locus_tag=DJ40_4070 NZ_CP008943.1 Protein Homology CDS 4582445 4583374 . + 0 ID=cds4019;Parent=gene4126;Dbxref=Genbank:WP_002210934.1;Name=WP_002210934.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_002210934.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4583388 4584122 . + . ID=gene4127;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=DJ40_RS20730;old_locus_tag=DJ40_4071 NZ_CP008943.1 Protein Homology CDS 4583388 4584122 . + 0 ID=cds4020;Parent=gene4127;Dbxref=Genbank:WP_002210935.1;Name=WP_002210935.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_002210935.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4584276 4584512 . + . ID=gene4128;Name=DJ40_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20735;old_locus_tag=DJ40_4072 NZ_CP008943.1 Protein Homology CDS 4584276 4584512 . + 0 ID=cds4021;Parent=gene4128;Dbxref=Genbank:WP_002220787.1;Name=WP_002220787.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4584643 4585848 . + . ID=gene4129;Name=DJ40_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20740;old_locus_tag=DJ40_4073 NZ_CP008943.1 Protein Homology CDS 4584643 4585848 . + 0 ID=cds4022;Parent=gene4129;Dbxref=Genbank:WP_002354075.1;Name=WP_002354075.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002354075.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4586210 4587016 . + . ID=gene4130;Name=DJ40_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20745;old_locus_tag=DJ40_4074 NZ_CP008943.1 Protein Homology CDS 4586210 4587016 . + 0 ID=cds4023;Parent=gene4130;Dbxref=Genbank:WP_038401401.1;Name=WP_038401401.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_038401401.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4587049 4587222 . + . ID=id336;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4587305 4588330 . + . ID=gene4131;Name=DJ40_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20750;old_locus_tag=DJ40_4075 NZ_CP008943.1 Protein Homology CDS 4587305 4588330 . + 0 ID=cds4024;Parent=gene4131;Dbxref=Genbank:WP_012303973.1;Name=WP_012303973.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_012303973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4588320 4588958 . + . ID=gene4132;Name=DJ40_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20755;old_locus_tag=DJ40_4076 NZ_CP008943.1 Protein Homology CDS 4588320 4588958 . + 0 ID=cds4025;Parent=gene4132;Dbxref=Genbank:WP_012303974.1;Name=WP_012303974.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_012303974.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4588958 4589980 . + . ID=gene4133;Name=DJ40_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20760;old_locus_tag=DJ40_4077 NZ_CP008943.1 Protein Homology CDS 4588958 4589980 . + 0 ID=cds4026;Parent=gene4133;Dbxref=Genbank:WP_002213083.1;Name=WP_002213083.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4589995 4590804 . + . ID=gene4134;Name=DJ40_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20765;old_locus_tag=DJ40_4078 NZ_CP008943.1 Protein Homology CDS 4589995 4590804 . + 0 ID=cds4027;Parent=gene4134;Dbxref=Genbank:WP_002213084.1;Name=WP_002213084.1;gbkey=CDS;product=DNAse;protein_id=WP_002213084.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4591110 4592543 . + . ID=gene4135;Name=DJ40_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20770;old_locus_tag=DJ40_4079 NZ_CP008943.1 Protein Homology CDS 4591110 4592543 . + 0 ID=cds4028;Parent=gene4135;Dbxref=Genbank:WP_038401404.1;Name=WP_038401404.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose subunit IIBC;protein_id=WP_038401404.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4592923 4593741 . + . ID=gene4136;Name=DJ40_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20775;old_locus_tag=DJ40_4080 NZ_CP008943.1 Protein Homology CDS 4592923 4593741 . + 0 ID=cds4029;Parent=gene4136;Dbxref=Genbank:WP_033853729.1;Name=WP_033853729.1;gbkey=CDS;product=shikimate dehydrogenase;protein_id=WP_033853729.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4593915 4594268 . + . ID=gene4137;Name=DJ40_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20780;old_locus_tag=DJ40_4081 NZ_CP008943.1 Protein Homology CDS 4593915 4594268 . + 0 ID=cds4030;Parent=gene4137;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4594303 4594692 . + . ID=gene4138;Name=DJ40_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20785;old_locus_tag=DJ40_4082 NZ_CP008943.1 Protein Homology CDS 4594303 4594692 . + 0 ID=cds4031;Parent=gene4138;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4594733 4595308 . + . ID=gene4139;Name=DJ40_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20790;old_locus_tag=DJ40_4083 NZ_CP008943.1 Protein Homology CDS 4594733 4595308 . + 0 ID=cds4032;Parent=gene4139;Dbxref=Genbank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4595289 4596155 . + . ID=gene4140;Name=DJ40_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20795;old_locus_tag=DJ40_4084 NZ_CP008943.1 Protein Homology CDS 4595289 4596155 . + 0 ID=cds4033;Parent=gene4140;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4596238 4597257 . + . ID=gene4141;Name=DJ40_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20800;old_locus_tag=DJ40_4085 NZ_CP008943.1 Protein Homology CDS 4596238 4597257 . + 0 ID=cds4034;Parent=gene4141;Dbxref=Genbank:WP_038401407.1;Name=WP_038401407.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_038401407.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4597385 4597927 . + . ID=gene4142;Name=DJ40_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20805;old_locus_tag=DJ40_4086 NZ_CP008943.1 Protein Homology CDS 4597385 4597927 . + 0 ID=cds4035;Parent=gene4142;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4598301 4599605 . + . ID=gene4143;Name=DJ40_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20810;old_locus_tag=DJ40_4087 NZ_CP008943.1 Protein Homology CDS 4598301 4599605 . + 0 ID=cds4036;Parent=gene4143;Dbxref=Genbank:WP_002213097.1;Name=WP_002213097.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_002213097.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4599620 4599957 . + . ID=id337;gbkey=repeat_region NZ_CP008943.1 RefSeq repeat_region 4599995 4600136 . + . ID=id338;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4600437 4601141 . + . ID=gene4144;Name=DJ40_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20815;old_locus_tag=DJ40_4088 NZ_CP008943.1 Protein Homology CDS 4600437 4601141 . + 0 ID=cds4037;Parent=gene4144;Dbxref=Genbank:WP_012104973.1;Name=WP_012104973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104973.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4601149 4601562 . + . ID=gene4145;Name=DJ40_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20820;old_locus_tag=DJ40_4089 NZ_CP008943.1 Protein Homology CDS 4601149 4601562 . + 0 ID=cds4038;Parent=gene4145;Dbxref=Genbank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4601873 4602412 . + . ID=gene4146;Name=DJ40_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20825;old_locus_tag=DJ40_4090 NZ_CP008943.1 Protein Homology CDS 4601873 4602412 . + 0 ID=cds4039;Parent=gene4146;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4602651 4606097 . - . ID=gene4147;Name=DJ40_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20830;old_locus_tag=DJ40_4091 NZ_CP008943.1 Protein Homology CDS 4602651 4606097 . - 0 ID=cds4040;Parent=gene4147;Dbxref=Genbank:WP_038401408.1;Name=WP_038401408.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_038401408.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4606367 4607569 . + . ID=gene4148;Name=DJ40_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20835;old_locus_tag=DJ40_4092 NZ_CP008943.1 Protein Homology CDS 4606367 4607569 . + 0 ID=cds4041;Parent=gene4148;Dbxref=Genbank:WP_002222341.1;Name=WP_002222341.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002222341.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4607562 4608266 . + . ID=gene4149;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=DJ40_RS20840;old_locus_tag=DJ40_4093 NZ_CP008943.1 Protein Homology CDS 4607562 4608266 . + 0 ID=cds4042;Parent=gene4149;Dbxref=Genbank:WP_002210923.1;Name=WP_002210923.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4608266 4609513 . + . ID=gene4150;Name=DJ40_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20845;old_locus_tag=DJ40_4094 NZ_CP008943.1 Protein Homology CDS 4608266 4609513 . + 0 ID=cds4043;Parent=gene4150;Dbxref=Genbank:WP_002210922.1;Name=WP_002210922.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002210922.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4609532 4610446 . + . ID=gene4151;Name=DJ40_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20850;old_locus_tag=DJ40_4095 NZ_CP008943.1 Protein Homology CDS 4609532 4610446 . + 0 ID=cds4044;Parent=gene4151;Dbxref=Genbank:WP_012303979.1;Name=WP_012303979.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_012303979.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4610495 4611331 . + . ID=gene4152;Name=DJ40_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20855;old_locus_tag=DJ40_4096 NZ_CP008943.1 Protein Homology CDS 4610495 4611331 . + 0 ID=cds4045;Parent=gene4152;Dbxref=Genbank:WP_012104979.1;Name=WP_012104979.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_012104979.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4611661 4612896 . + . ID=gene4153;Name=DJ40_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20860;old_locus_tag=DJ40_4097 NZ_CP008943.1 Protein Homology CDS 4611661 4612896 . + 0 ID=cds4046;Parent=gene4153;Dbxref=Genbank:WP_002210920.1;Name=WP_002210920.1;gbkey=CDS;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4612932 4613107 . + . ID=id339;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4613301 4614422 . - . ID=gene4154;Name=DJ40_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20865;old_locus_tag=DJ40_4098 NZ_CP008943.1 Protein Homology CDS 4613301 4614422 . - 0 ID=cds4047;Parent=gene4154;Dbxref=Genbank:WP_002210919.1;Name=WP_002210919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210919.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4614506 4615960 . - . ID=gene4155;Name=DJ40_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20870;old_locus_tag=DJ40_4099 NZ_CP008943.1 Protein Homology CDS 4614506 4615960 . - 0 ID=cds4048;Parent=gene4155;Dbxref=Genbank:WP_002210918.1;Name=WP_002210918.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_002210918.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4615966 4616637 . - . ID=gene4156;Name=DJ40_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20875;old_locus_tag=DJ40_4100 NZ_CP008943.1 Protein Homology CDS 4615966 4616637 . - 0 ID=cds4049;Parent=gene4156;Dbxref=Genbank:WP_002230788.1;Name=WP_002230788.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002230788.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4616848 4617471 . - . ID=gene4157;Name=DJ40_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20880;old_locus_tag=DJ40_4101 NZ_CP008943.1 Protein Homology CDS 4616848 4617471 . - 0 ID=cds4050;Parent=gene4157;Dbxref=Genbank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210916.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4617650 4619020 . - . ID=gene4158;Name=DJ40_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20885;old_locus_tag=DJ40_4102 NZ_CP008943.1 Protein Homology CDS 4617650 4619020 . - 0 ID=cds4051;Parent=gene4158;Dbxref=Genbank:WP_002230790.1;Name=WP_002230790.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002230790.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4619081 4619707 . - . ID=gene4159;Name=DJ40_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20890;old_locus_tag=DJ40_4103 NZ_CP008943.1 Protein Homology CDS 4619081 4619707 . - 0 ID=cds4052;Parent=gene4159;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4619765 4620880 . - . ID=gene4160;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=DJ40_RS20895;old_locus_tag=DJ40_4104 NZ_CP008943.1 Protein Homology CDS 4619765 4620880 . - 0 ID=cds4053;Parent=gene4160;Dbxref=Genbank:WP_038401874.1;Name=WP_038401874.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;protein_id=WP_038401874.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4621067 4621513 . - . ID=gene4161;Name=DJ40_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20900;old_locus_tag=DJ40_4105 NZ_CP008943.1 Protein Homology CDS 4621067 4621513 . - 0 ID=cds4054;Parent=gene4161;Dbxref=Genbank:WP_002210912.1;Name=WP_002210912.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210912.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4621506 4622039 . - . ID=gene4162;Name=DJ40_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20905;old_locus_tag=DJ40_4106 NZ_CP008943.1 Protein Homology CDS 4621506 4622039 . - 0 ID=cds4055;Parent=gene4162;Dbxref=Genbank:WP_002210911.1;Name=WP_002210911.1;gbkey=CDS;product=23S rRNA pseudouridine synthase E;protein_id=WP_002210911.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4622265 4623518 . + . ID=gene4163;Name=DJ40_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20910;old_locus_tag=DJ40_4107 NZ_CP008943.1 Protein Homology CDS 4622265 4623518 . + 0 ID=cds4056;Parent=gene4163;Dbxref=Genbank:WP_032466488.1;Name=WP_032466488.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_032466488.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4623355 4623506 . + . ID=id340;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4623642 4624766 . - . ID=gene4164;Name=DJ40_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20915;old_locus_tag=DJ40_4108 NZ_CP008943.1 Protein Homology CDS 4623642 4624766 . - 0 ID=cds4057;Parent=gene4164;Dbxref=Genbank:WP_038401411.1;Name=WP_038401411.1;gbkey=CDS;product=integrase;protein_id=WP_038401411.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4624750 4624992 . - . ID=gene4165;Name=DJ40_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20920;old_locus_tag=DJ40_4109 NZ_CP008943.1 Protein Homology CDS 4624750 4624992 . - 0 ID=cds4058;Parent=gene4165;Dbxref=Genbank:WP_038401413.1;Name=WP_038401413.1;gbkey=CDS;product=excisionase;protein_id=WP_038401413.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4625191 4625427 . - . ID=gene4166;Name=DJ40_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20925;old_locus_tag=DJ40_4111 NZ_CP008943.1 GeneMarkS+ CDS 4625191 4625427 . - 0 ID=cds4059;Parent=gene4166;Dbxref=Genbank:WP_038401415.1;Name=WP_038401415.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401415.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4625420 4626091 . - . ID=gene4167;Name=DJ40_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21945;old_locus_tag=DJ40_4112 NZ_CP008943.1 Protein Homology CDS 4625420 4626091 . - 0 ID=cds4060;Parent=gene4167;Dbxref=Genbank:WP_049862797.1;Name=WP_049862797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862797.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4626088 4626414 . - . ID=gene4168;Name=DJ40_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20935;old_locus_tag=DJ40_4113 NZ_CP008943.1 Protein Homology CDS 4626088 4626414 . - 0 ID=cds4061;Parent=gene4168;Dbxref=Genbank:WP_038401879.1;Name=WP_038401879.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401879.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4626420 4626980 . - . ID=gene4169;Name=DJ40_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20940;old_locus_tag=DJ40_4114 NZ_CP008943.1 Protein Homology CDS 4626420 4626980 . - 0 ID=cds4062;Parent=gene4169;Dbxref=Genbank:WP_038401417.1;Name=WP_038401417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401417.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4626980 4627846 . - . ID=gene4170;Name=DJ40_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20945;old_locus_tag=DJ40_4115 NZ_CP008943.1 Protein Homology CDS 4626980 4627846 . - 0 ID=cds4063;Parent=gene4170;Dbxref=Genbank:WP_049862798.1;Name=WP_049862798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862798.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4627843 4628124 . - . ID=gene4171;Name=DJ40_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20950;old_locus_tag=DJ40_4116 NZ_CP008943.1 Protein Homology CDS 4627843 4628124 . - 0 ID=cds4064;Parent=gene4171;Dbxref=Genbank:WP_038401419.1;Name=WP_038401419.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401419.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4628134 4628370 . - . ID=gene4172;Name=DJ40_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20955;old_locus_tag=DJ40_4117 NZ_CP008943.1 Protein Homology CDS 4628134 4628370 . - 0 ID=cds4065;Parent=gene4172;Dbxref=Genbank:WP_049862799.1;Name=WP_049862799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862799.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4628442 4628630 . + . ID=gene4173;Name=DJ40_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20960 NZ_CP008943.1 GeneMarkS+ CDS 4628442 4628630 . + 0 ID=cds4066;Parent=gene4173;Dbxref=Genbank:WP_038401421.1;Name=WP_038401421.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401421.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4628627 4629589 . + . ID=gene4174;Name=DJ40_RS20965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS20965;pseudo=true NZ_CP008943.1 Protein Homology CDS 4628627 4629589 . + 0 ID=cds4067;Parent=gene4174;gbkey=CDS;product=DNA primase;pseudo=true;transl_except=(pos:4629317..4629319%2Caa:Other);transl_table=11 NZ_CP008943.1 RefSeq gene 4629589 4630350 . + . ID=gene4175;Name=DJ40_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20970;old_locus_tag=DJ40_4119 NZ_CP008943.1 Protein Homology CDS 4629589 4630350 . + 0 ID=cds4068;Parent=gene4175;Dbxref=Genbank:WP_038401423.1;Name=WP_038401423.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_038401423.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4630698 4631453 . + . ID=gene4176;Name=DJ40_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20975;old_locus_tag=DJ40_4120 NZ_CP008943.1 Protein Homology CDS 4630698 4631453 . + 0 ID=cds4069;Parent=gene4176;Dbxref=Genbank:WP_038401885.1;Name=WP_038401885.1;gbkey=CDS;product=protein kinase;protein_id=WP_038401885.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4631450 4632187 . + . ID=gene4177;Name=DJ40_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20980;old_locus_tag=DJ40_4121 NZ_CP008943.1 Protein Homology CDS 4631450 4632187 . + 0 ID=cds4070;Parent=gene4177;Dbxref=Genbank:WP_038401426.1;Name=WP_038401426.1;gbkey=CDS;product=protein phosphatase;protein_id=WP_038401426.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4632272 4632610 . + . ID=gene4178;Name=DJ40_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20985;old_locus_tag=DJ40_4122 NZ_CP008943.1 Protein Homology CDS 4632272 4632610 . + 0 ID=cds4071;Parent=gene4178;Dbxref=Genbank:WP_038401427.1;Name=WP_038401427.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401427.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4632600 4632995 . + . ID=gene4179;Name=DJ40_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20990;old_locus_tag=DJ40_4123 NZ_CP008943.1 Protein Homology CDS 4632600 4632995 . + 0 ID=cds4072;Parent=gene4179;Dbxref=Genbank:WP_038401429.1;Name=WP_038401429.1;gbkey=CDS;product=peptidase M15;protein_id=WP_038401429.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4633231 4633698 . + . ID=gene4180;Name=DJ40_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS20995;old_locus_tag=DJ40_4124 NZ_CP008943.1 Protein Homology CDS 4633231 4633698 . + 0 ID=cds4073;Parent=gene4180;Dbxref=Genbank:WP_038401887.1;Name=WP_038401887.1;gbkey=CDS;product=endopeptidase;protein_id=WP_038401887.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4633909 4634091 . + . ID=gene4181;Name=DJ40_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21000;old_locus_tag=DJ40_4126 NZ_CP008943.1 Protein Homology CDS 4633909 4634091 . + 0 ID=cds4074;Parent=gene4181;Dbxref=Genbank:WP_038401431.1;Name=WP_038401431.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401431.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4634328 4634696 . + . ID=gene4182;Name=DJ40_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21005;old_locus_tag=DJ40_4127 NZ_CP008943.1 GeneMarkS+ CDS 4634328 4634696 . + 0 ID=cds4075;Parent=gene4182;Dbxref=Genbank:WP_038401432.1;Name=WP_038401432.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401432.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4634727 4635016 . + . ID=gene4183;Name=DJ40_RS21010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21010;pseudo=true NZ_CP008943.1 Protein Homology CDS 4634727 4635016 . + 0 ID=cds4076;Parent=gene4183;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase small subunit;pseudo=true;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4634903 4635343 . + . ID=id341;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4634994 4635332 . + . ID=gene4184;Name=DJ40_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21015 NZ_CP008943.1 Protein Homology CDS 4634994 4635332 . + 0 ID=cds4077;Parent=gene4184;Dbxref=Genbank:WP_038401434.1;Name=WP_038401434.1;gbkey=CDS;product=terminase;protein_id=WP_038401434.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4635665 4635841 . + . ID=gene4185;Name=DJ40_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21020;old_locus_tag=DJ40_4129 NZ_CP008943.1 Protein Homology CDS 4635665 4635841 . + 0 ID=cds4078;Parent=gene4185;Dbxref=Genbank:WP_025383392.1;Name=WP_025383392.1;gbkey=CDS;product=mRNA interferase;protein_id=WP_025383392.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4635892 4636299 . + . ID=gene4186;Name=DJ40_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21025;old_locus_tag=DJ40_4130 NZ_CP008943.1 Protein Homology CDS 4635892 4636299 . + 0 ID=cds4079;Parent=gene4186;Dbxref=Genbank:WP_038401436.1;Name=WP_038401436.1;gbkey=CDS;product=antitoxin;protein_id=WP_038401436.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4636356 4637960 . + . ID=gene4187;Name=DJ40_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21030;old_locus_tag=DJ40_4131 NZ_CP008943.1 Protein Homology CDS 4636356 4637960 . + 0 ID=cds4080;Parent=gene4187;Dbxref=Genbank:WP_038401438.1;Name=WP_038401438.1;gbkey=CDS;product=bacteriophage TerL protein;protein_id=WP_038401438.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4638058 4638315 . - . ID=gene4188;Name=DJ40_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21035 NZ_CP008943.1 GeneMarkS+ CDS 4638058 4638315 . - 0 ID=cds4081;Parent=gene4188;Dbxref=Genbank:WP_038401440.1;Name=WP_038401440.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401440.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4638436 4639245 . + . ID=gene4189;Name=DJ40_RS21040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21040;partial=true;pseudo=true;start_range=.,4638436 NZ_CP008943.1 Protein Homology CDS 4638436 4639245 . + 0 ID=cds4082;Parent=gene4189;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4638436;transl_table=11 NZ_CP008943.1 RefSeq gene 4639249 4639470 . + . ID=gene4190;Name=DJ40_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21045;old_locus_tag=DJ40_4134 NZ_CP008943.1 GeneMarkS+ CDS 4639249 4639470 . + 0 ID=cds4083;Parent=gene4190;Dbxref=Genbank:WP_038401443.1;Name=WP_038401443.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401443.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4639463 4641244 . + . ID=gene4191;Name=DJ40_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21050;old_locus_tag=DJ40_4135 NZ_CP008943.1 Protein Homology CDS 4639463 4641244 . + 0 ID=cds4084;Parent=gene4191;Dbxref=Genbank:WP_038401445.1;Name=WP_038401445.1;gbkey=CDS;product=phage tail protein;protein_id=WP_038401445.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4641122 4641266 . + . ID=id342;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4641626 4641868 . - . ID=gene4192;Name=DJ40_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21055;old_locus_tag=DJ40_4136 NZ_CP008943.1 Protein Homology CDS 4641626 4641868 . - 0 ID=cds4085;Parent=gene4192;Dbxref=Genbank:WP_038401891.1;Name=WP_038401891.1;gbkey=CDS;product=damage-inducible protein;protein_id=WP_038401891.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4641885 4642127 . - . ID=gene4193;Name=DJ40_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21060;old_locus_tag=DJ40_4137 NZ_CP008943.1 Protein Homology CDS 4641885 4642127 . - 0 ID=cds4086;Parent=gene4193;Dbxref=Genbank:WP_012304439.1;Name=WP_012304439.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_012304439.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4642321 4642472 . + . ID=id343;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4642630 4643673 . - . ID=gene4194;Name=DJ40_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21065;old_locus_tag=DJ40_4139 NZ_CP008943.1 Protein Homology CDS 4642630 4643673 . - 0 ID=cds4087;Parent=gene4194;Dbxref=Genbank:WP_038401447.1;Name=WP_038401447.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_038401447.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4643933 4644193 . - . ID=gene4195;Name=DJ40_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21070;old_locus_tag=DJ40_4140 NZ_CP008943.1 Protein Homology CDS 4643933 4644193 . - 0 ID=cds4088;Parent=gene4195;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4644313 4645893 . - . ID=gene4196;Name=DJ40_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21075;old_locus_tag=DJ40_4141 NZ_CP008943.1 Protein Homology CDS 4644313 4645893 . - 0 ID=cds4089;Parent=gene4196;Dbxref=Genbank:WP_038401449.1;Name=WP_038401449.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_038401449.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4646813 4647670 . - . ID=gene4197;Name=DJ40_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21080;old_locus_tag=DJ40_4142 NZ_CP008943.1 Protein Homology CDS 4646813 4647670 . - 0 ID=cds4090;Parent=gene4197;Dbxref=Genbank:WP_038401451.1;Name=WP_038401451.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_038401451.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4647830 4648213 . + . ID=gene4198;Name=DJ40_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21085;old_locus_tag=DJ40_4143 NZ_CP008943.1 Protein Homology CDS 4647830 4648213 . + 0 ID=cds4091;Parent=gene4198;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4648271 4648438 . + . ID=gene4199;Name=DJ40_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21090 NZ_CP008943.1 Protein Homology CDS 4648271 4648438 . + 0 ID=cds4092;Parent=gene4199;Dbxref=Genbank:WP_012104990.1;Name=WP_012104990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012104990.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4648745 4650070 . + . ID=gene4200;Name=DJ40_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21095;old_locus_tag=DJ40_4145 NZ_CP008943.1 Protein Homology CDS 4648745 4650070 . + 0 ID=cds4093;Parent=gene4200;Dbxref=Genbank:WP_011192581.1;Name=WP_011192581.1;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=WP_011192581.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4650364 4650567 . - . ID=gene4201;Name=DJ40_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21100;old_locus_tag=DJ40_4146 NZ_CP008943.1 Protein Homology CDS 4650364 4650567 . - 0 ID=cds4094;Parent=gene4201;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4650870 4651769 . - . ID=gene4202;Name=DJ40_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21105;old_locus_tag=DJ40_4147 NZ_CP008943.1 Protein Homology CDS 4650870 4651769 . - 0 ID=cds4095;Parent=gene4202;Dbxref=Genbank:WP_012413770.1;Name=WP_012413770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012413770.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4651861 4652310 . - . ID=gene4203;Name=DJ40_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21110;old_locus_tag=DJ40_4148 NZ_CP008943.1 Protein Homology CDS 4651861 4652310 . - 0 ID=cds4096;Parent=gene4203;Dbxref=Genbank:WP_038401453.1;Name=WP_038401453.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_038401453.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4652813 4653346 . - . ID=gene4204;Name=DJ40_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21115;old_locus_tag=DJ40_4149 NZ_CP008943.1 Protein Homology CDS 4652813 4653346 . - 0 ID=cds4097;Parent=gene4204;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4653657 4654667 . - . ID=gene4205;Name=DJ40_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21120;old_locus_tag=DJ40_4150 NZ_CP008943.1 Protein Homology CDS 4653657 4654667 . - 0 ID=cds4098;Parent=gene4205;Dbxref=Genbank:WP_038401455.1;Name=WP_038401455.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_038401455.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4655074 4658274 . - . ID=gene4206;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=DJ40_RS21125;old_locus_tag=DJ40_4151 NZ_CP008943.1 Protein Homology CDS 4655074 4658274 . - 0 ID=cds4099;Parent=gene4206;Dbxref=Genbank:WP_038401457.1;Name=WP_038401457.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_038401457.1;transl_table=11 NZ_CP008943.1 cmsearch region 4658634 4659076 . + . ID=id344;Note=cspA;gbkey=misc_feature NZ_CP008943.1 RefSeq gene 4658815 4659027 . + . ID=gene4207;Name=DJ40_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21130;old_locus_tag=DJ40_4152 NZ_CP008943.1 Protein Homology CDS 4658815 4659027 . + 0 ID=cds4100;Parent=gene4207;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4659242 4659433 . + . ID=gene4208;Name=DJ40_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21135;old_locus_tag=DJ40_4153 NZ_CP008943.1 Protein Homology CDS 4659242 4659433 . + 0 ID=cds4101;Parent=gene4208;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4659616 4661322 . - . ID=gene4209;Name=DJ40_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21140;old_locus_tag=DJ40_4154 NZ_CP008943.1 Protein Homology CDS 4659616 4661322 . - 0 ID=cds4102;Parent=gene4209;Dbxref=Genbank:WP_032466679.1;Name=WP_032466679.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_032466679.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4661953 4662129 . + . ID=gene4210;Name=DJ40_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21145 NZ_CP008943.1 Protein Homology CDS 4661953 4662129 . + 0 ID=cds4103;Parent=gene4210;Dbxref=Genbank:WP_032466480.1;Name=WP_032466480.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032466480.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4662481 4663179 . + . ID=gene4211;Name=DJ40_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21150;old_locus_tag=DJ40_4155 NZ_CP008943.1 Protein Homology CDS 4662481 4663179 . + 0 ID=cds4104;Parent=gene4211;Dbxref=Genbank:WP_011192576.1;Name=WP_011192576.1;gbkey=CDS;product=magnesium transporter;protein_id=WP_011192576.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4663572 4666271 . + . ID=gene4212;Name=DJ40_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21155;old_locus_tag=DJ40_4156 NZ_CP008943.1 Protein Homology CDS 4663572 4666271 . + 0 ID=cds4105;Parent=gene4212;Dbxref=Genbank:WP_038401459.1;Name=WP_038401459.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_038401459.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4667458 4667808 . + . ID=gene4213;Name=DJ40_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21160;old_locus_tag=DJ40_4157 NZ_CP008943.1 Protein Homology CDS 4667458 4667808 . + 0 ID=cds4106;Parent=gene4213;Dbxref=Genbank:WP_011192574.1;Name=WP_011192574.1;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;gbkey=CDS;product=flagellar transcriptional regulator FlhD;protein_id=WP_011192574.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4667812 4668393 . + . ID=gene4214;Name=DJ40_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21165;old_locus_tag=DJ40_4158 NZ_CP008943.1 Protein Homology CDS 4667812 4668393 . + 0 ID=cds4107;Parent=gene4214;Dbxref=Genbank:WP_002210889.1;Name=WP_002210889.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210889.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4668598 4669485 . + . ID=gene4215;Name=DJ40_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21170;old_locus_tag=DJ40_4159 NZ_CP008943.1 Protein Homology CDS 4668598 4669485 . + 0 ID=cds4108;Parent=gene4215;Dbxref=Genbank:WP_011192573.1;Name=WP_011192573.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_011192573.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4669482 4670765 . + . ID=gene4216;Name=DJ40_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21175;old_locus_tag=DJ40_4160 NZ_CP008943.1 Protein Homology CDS 4669482 4670765 . + 0 ID=cds4109;Parent=gene4216;Dbxref=Genbank:WP_038401462.1;Name=WP_038401462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401462.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4670782 4672932 . + . ID=gene4217;Name=DJ40_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21180;old_locus_tag=DJ40_4161 NZ_CP008943.1 Protein Homology CDS 4670782 4672932 . + 0 ID=cds4110;Parent=gene4217;Dbxref=Genbank:WP_038401464.1;Name=WP_038401464.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_038401464.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4673095 4673592 . + . ID=gene4218;Name=DJ40_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21185;old_locus_tag=DJ40_4162 NZ_CP008943.1 Protein Homology CDS 4673095 4673592 . + 0 ID=cds4111;Parent=gene4218;Dbxref=Genbank:WP_011192570.1;Name=WP_011192570.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_011192570.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4674212 4677076 . + . ID=gene4219;Name=DJ40_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21190;old_locus_tag=DJ40_4163 NZ_CP008943.1 Protein Homology CDS 4674212 4677076 . + 0 ID=cds4112;Parent=gene4219;Dbxref=Genbank:WP_032466477.1;Name=WP_032466477.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466477.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4677145 4677846 . + . ID=gene4220;Name=DJ40_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21195;old_locus_tag=DJ40_4164 NZ_CP008943.1 Protein Homology CDS 4677145 4677846 . + 0 ID=cds4113;Parent=gene4220;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4678087 4679760 . + . ID=gene4221;Name=DJ40_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21200;old_locus_tag=DJ40_4165 NZ_CP008943.1 Protein Homology CDS 4678087 4679760 . + 0 ID=cds4114;Parent=gene4221;Dbxref=Genbank:WP_011192568.1;Name=WP_011192568.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_011192568.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4679944 4681554 . + . ID=gene4222;Name=DJ40_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21205;old_locus_tag=DJ40_4166 NZ_CP008943.1 Protein Homology CDS 4679944 4681554 . + 0 ID=cds4115;Parent=gene4222;Dbxref=Genbank:WP_038401466.1;Name=WP_038401466.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting protein IV;protein_id=WP_038401466.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4681727 4682599 . + . ID=gene4223;Name=DJ40_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21210;old_locus_tag=DJ40_4167 NZ_CP008943.1 Protein Homology CDS 4681727 4682599 . + 0 ID=cds4116;Parent=gene4223;Dbxref=Genbank:WP_038401469.1;Name=WP_038401469.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_038401469.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4682599 4683648 . + . ID=gene4224;Name=DJ40_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21215;old_locus_tag=DJ40_4168 NZ_CP008943.1 Protein Homology CDS 4682599 4683648 . + 0 ID=cds4117;Parent=gene4224;Dbxref=Genbank:WP_002210874.1;Name=WP_002210874.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_002210874.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4683749 4684138 . + . ID=gene4225;Name=DJ40_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21220;old_locus_tag=DJ40_4169 NZ_CP008943.1 Protein Homology CDS 4683749 4684138 . + 0 ID=cds4118;Parent=gene4225;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4684148 4684792 . + . ID=gene4226;Name=DJ40_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21225;old_locus_tag=DJ40_4170 NZ_CP008943.1 Protein Homology CDS 4684148 4684792 . + 0 ID=cds4119;Parent=gene4226;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4685090 4685209 . - . ID=gene4227;Name=DJ40_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21230 NZ_CP008943.1 Protein Homology CDS 4685090 4685209 . - 0 ID=cds4120;Parent=gene4227;Dbxref=Genbank:WP_002210871.1;Name=WP_002210871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210871.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4685333 4686097 . + . ID=gene4228;Name=DJ40_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21235;old_locus_tag=DJ40_4171 NZ_CP008943.1 Protein Homology CDS 4685333 4686097 . + 0 ID=cds4121;Parent=gene4228;Dbxref=Genbank:WP_038401471.1;Name=WP_038401471.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_038401471.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4686571 4688676 . + . ID=gene4229;Name=DJ40_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21240;old_locus_tag=DJ40_4172 NZ_CP008943.1 Protein Homology CDS 4686571 4688676 . + 0 ID=cds4122;Parent=gene4229;Dbxref=Genbank:WP_038401894.1;Name=WP_038401894.1;gbkey=CDS;product=cell surface protein;protein_id=WP_038401894.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4688663 4689097 . + . ID=gene4230;Name=DJ40_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21245;old_locus_tag=DJ40_4173 NZ_CP008943.1 Protein Homology CDS 4688663 4689097 . + 0 ID=cds4123;Parent=gene4230;Dbxref=Genbank:WP_038401473.1;Name=WP_038401473.1;gbkey=CDS;product=adhesin;protein_id=WP_038401473.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4689197 4690150 . + . ID=gene4231;Name=DJ40_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21250;old_locus_tag=DJ40_4174 NZ_CP008943.1 Protein Homology CDS 4689197 4690150 . + 0 ID=cds4124;Parent=gene4231;Dbxref=Genbank:WP_012304001.1;Name=WP_012304001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304001.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4690768 4691997 . - . ID=gene4232;Name=DJ40_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21260;old_locus_tag=DJ40_4176 NZ_CP008943.1 Protein Homology CDS 4690768 4691997 . - 0 ID=cds4125;Parent=gene4232;Dbxref=Genbank:WP_011192563.1;Name=WP_011192563.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_011192563.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4692398 4692592 . - . ID=gene4233;Name=DJ40_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21265;old_locus_tag=DJ40_4177 NZ_CP008943.1 Protein Homology CDS 4692398 4692592 . - 0 ID=cds4126;Parent=gene4233;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4693157 4693405 . + . ID=gene4234;Name=DJ40_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21270;old_locus_tag=DJ40_4178 NZ_CP008943.1 Protein Homology CDS 4693157 4693405 . + 0 ID=cds4127;Parent=gene4234;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4693492 4693598 . + . ID=id345;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4693799 4695055 . + . ID=gene4235;Name=DJ40_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21275;old_locus_tag=DJ40_4179 NZ_CP008943.1 Protein Homology CDS 4693799 4695055 . + 0 ID=cds4128;Parent=gene4235;Dbxref=Genbank:WP_002210864.1;Name=WP_002210864.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210864.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4695210 4695443 . + . ID=gene4236;Name=DJ40_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21280;old_locus_tag=DJ40_4180 NZ_CP008943.1 Protein Homology CDS 4695210 4695443 . + 0 ID=cds4129;Parent=gene4236;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4696243 4696632 . + . ID=gene4237;Name=DJ40_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21285;old_locus_tag=DJ40_4182 NZ_CP008943.1 Protein Homology CDS 4696243 4696632 . + 0 ID=cds4130;Parent=gene4237;Dbxref=Genbank:WP_011192562.1;Name=WP_011192562.1;gbkey=CDS;product=RNA-binding protein;protein_id=WP_011192562.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4696742 4696981 . - . ID=gene4238;Name=DJ40_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21290;old_locus_tag=DJ40_4183 NZ_CP008943.1 Protein Homology CDS 4696742 4696981 . - 0 ID=cds4131;Parent=gene4238;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4697189 4698178 . - . ID=gene4239;Name=DJ40_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21295;old_locus_tag=DJ40_4184 NZ_CP008943.1 Protein Homology CDS 4697189 4698178 . - 0 ID=cds4132;Parent=gene4239;Dbxref=Genbank:WP_011192561.1;Name=WP_011192561.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_011192561.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4698384 4700831 . - . ID=gene4240;Name=DJ40_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21300;old_locus_tag=DJ40_4185 NZ_CP008943.1 Protein Homology CDS 4698384 4700831 . - 0 ID=cds4133;Parent=gene4240;Dbxref=Genbank:WP_011192560.1;Name=WP_011192560.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192560.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4700934 4701686 . - . ID=gene4241;Name=DJ40_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21305;old_locus_tag=DJ40_4186 NZ_CP008943.1 Protein Homology CDS 4700934 4701686 . - 0 ID=cds4134;Parent=gene4241;Dbxref=Genbank:WP_002210856.1;Name=WP_002210856.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210856.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4701717 4702274 . - . ID=gene4242;Name=DJ40_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21310;old_locus_tag=DJ40_4187 NZ_CP008943.1 Protein Homology CDS 4701717 4702274 . - 0 ID=cds4135;Parent=gene4242;Dbxref=Genbank:WP_012304006.1;Name=WP_012304006.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_012304006.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4702295 4702786 . - . ID=gene4243;Name=DJ40_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21315;old_locus_tag=DJ40_4188 NZ_CP008943.1 Protein Homology CDS 4702295 4702786 . - 0 ID=cds4136;Parent=gene4243;Dbxref=Genbank:WP_002210853.1;Name=WP_002210853.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210853.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4702831 4703385 . - . ID=gene4244;Name=DJ40_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21320;old_locus_tag=DJ40_4189 NZ_CP008943.1 Protein Homology CDS 4702831 4703385 . - 0 ID=cds4137;Parent=gene4244;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4703866 4706517 . - . ID=gene4245;Name=DJ40_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21325;old_locus_tag=DJ40_4190 NZ_CP008943.1 Protein Homology CDS 4703866 4706517 . - 0 ID=cds4138;Parent=gene4245;Dbxref=Genbank:WP_038401478.1;Name=WP_038401478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401478.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4706486 4707733 . - . ID=gene4246;Name=DJ40_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21330;old_locus_tag=DJ40_4191 NZ_CP008943.1 Protein Homology CDS 4706486 4707733 . - 0 ID=cds4139;Parent=gene4246;Dbxref=Genbank:WP_038401479.1;Name=WP_038401479.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401479.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4707965 4708462 . + . ID=gene4247;Name=DJ40_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21335;old_locus_tag=DJ40_4192 NZ_CP008943.1 Protein Homology CDS 4707965 4708462 . + 0 ID=cds4140;Parent=gene4247;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4708558 4709271 . + . ID=gene4248;Name=DJ40_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21340;old_locus_tag=DJ40_4193 NZ_CP008943.1 Protein Homology CDS 4708558 4709271 . + 0 ID=cds4141;Parent=gene4248;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4709291 4711369 . + . ID=gene4249;Name=DJ40_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21345;old_locus_tag=DJ40_4194 NZ_CP008943.1 Protein Homology CDS 4709291 4711369 . + 0 ID=cds4142;Parent=gene4249;Dbxref=Genbank:WP_011192556.1;Name=WP_011192556.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_011192556.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4711383 4711574 . + . ID=gene4250;Name=DJ40_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21350 NZ_CP008943.1 Protein Homology CDS 4711383 4711574 . + 0 ID=cds4143;Parent=gene4250;Dbxref=Genbank:WP_038401481.1;Name=WP_038401481.1;gbkey=CDS;product=transposase;protein_id=WP_038401481.1;transl_table=11 NZ_CP008943.1 RefSeq repeat_region 4711412 4712132 . + . ID=id346;gbkey=repeat_region NZ_CP008943.1 RefSeq gene 4711622 4712023 . + . ID=gene4251;Name=DJ40_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21355 NZ_CP008943.1 Protein Homology CDS 4711622 4712023 . + 0 ID=cds4144;Parent=gene4251;Dbxref=Genbank:WP_038401484.1;Name=WP_038401484.1;gbkey=CDS;product=transposase;protein_id=WP_038401484.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4712536 4713417 . + . ID=gene4252;Name=DJ40_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21360;old_locus_tag=DJ40_4198 NZ_CP008943.1 Protein Homology CDS 4712536 4713417 . + 0 ID=cds4145;Parent=gene4252;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4714076 4714618 . + . ID=gene4253;Name=DJ40_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21365;old_locus_tag=DJ40_4199 NZ_CP008943.1 Protein Homology CDS 4714076 4714618 . + 0 ID=cds4146;Parent=gene4253;Dbxref=Genbank:WP_012105009.1;Name=WP_012105009.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_012105009.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4714864 4715550 . + . ID=gene4254;Name=DJ40_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21370;old_locus_tag=DJ40_4200 NZ_CP008943.1 Protein Homology CDS 4714864 4715550 . + 0 ID=cds4147;Parent=gene4254;Dbxref=Genbank:WP_038401487.1;Name=WP_038401487.1;gbkey=CDS;product=fimbrial assembly protein;protein_id=WP_038401487.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4715632 4718244 . + . ID=gene4255;Name=DJ40_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21375;old_locus_tag=DJ40_4201 NZ_CP008943.1 Protein Homology CDS 4715632 4718244 . + 0 ID=cds4148;Parent=gene4255;Dbxref=Genbank:WP_002210844.1;Name=WP_002210844.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210844.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4718241 4719404 . + . ID=gene4256;Name=DJ40_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21380;old_locus_tag=DJ40_4202 NZ_CP008943.1 Protein Homology CDS 4718241 4719404 . + 0 ID=cds4149;Parent=gene4256;Dbxref=Genbank:WP_002215120.1;Name=WP_002215120.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4719401 4720204 . + . ID=gene4257;Name=DJ40_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21385;old_locus_tag=DJ40_4203 NZ_CP008943.1 Protein Homology CDS 4719401 4720204 . + 0 ID=cds4150;Parent=gene4257;Dbxref=Genbank:WP_002210843.1;Name=WP_002210843.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210843.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4720258 4721625 . - . ID=gene4258;Name=DJ40_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21390;old_locus_tag=DJ40_4204 NZ_CP008943.1 Protein Homology CDS 4720258 4721625 . - 0 ID=cds4151;Parent=gene4258;Dbxref=Genbank:WP_002210842.1;Name=WP_002210842.1;gbkey=CDS;product=multidrug MFS transporter;protein_id=WP_002210842.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4722012 4723178 . + . ID=gene4259;Name=DJ40_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21395;old_locus_tag=DJ40_4205 NZ_CP008943.1 Protein Homology CDS 4722012 4723178 . + 0 ID=cds4152;Parent=gene4259;Dbxref=Genbank:WP_011192552.1;Name=WP_011192552.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_011192552.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4723365 4724156 . + . ID=gene4260;Name=DJ40_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21400;old_locus_tag=DJ40_4206 NZ_CP008943.1 Protein Homology CDS 4723365 4724156 . + 0 ID=cds4153;Parent=gene4260;Dbxref=Genbank:WP_002210840.1;Name=WP_002210840.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002210840.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4724530 4725381 . + . ID=gene4261;Name=DJ40_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21405;old_locus_tag=DJ40_4207 NZ_CP008943.1 Protein Homology CDS 4724530 4725381 . + 0 ID=cds4154;Parent=gene4261;Dbxref=Genbank:WP_002210839.1;Name=WP_002210839.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4725596 4726987 . - . ID=gene4262;Name=DJ40_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21410;old_locus_tag=DJ40_4208 NZ_CP008943.1 Protein Homology CDS 4725596 4726987 . - 0 ID=cds4155;Parent=gene4262;Dbxref=Genbank:WP_012105013.1;Name=WP_012105013.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_012105013.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4727191 4727739 . - . ID=gene4263;Name=DJ40_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21415;old_locus_tag=DJ40_4209 NZ_CP008943.1 Protein Homology CDS 4727191 4727739 . - 0 ID=cds4156;Parent=gene4263;Dbxref=Genbank:WP_033851001.1;Name=WP_033851001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_033851001.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4728255 4728965 . - . ID=gene4264;Name=DJ40_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21420;old_locus_tag=DJ40_4210 NZ_CP008943.1 Protein Homology CDS 4728255 4728965 . - 0 ID=cds4157;Parent=gene4264;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4729263 4730555 . - . ID=gene4265;Name=DJ40_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21425;old_locus_tag=DJ40_4211 NZ_CP008943.1 Protein Homology CDS 4729263 4730555 . - 0 ID=cds4158;Parent=gene4265;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4730571 4731698 . - . ID=gene4266;Name=DJ40_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21430;old_locus_tag=DJ40_4212 NZ_CP008943.1 Protein Homology CDS 4730571 4731698 . - 0 ID=cds4159;Parent=gene4266;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4731712 4732632 . - . ID=gene4267;Name=DJ40_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21435;old_locus_tag=DJ40_4213 NZ_CP008943.1 Protein Homology CDS 4731712 4732632 . - 0 ID=cds4160;Parent=gene4267;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4732625 4733515 . - . ID=gene4268;Name=DJ40_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21440;old_locus_tag=DJ40_4214 NZ_CP008943.1 Protein Homology CDS 4732625 4733515 . - 0 ID=cds4161;Parent=gene4268;Dbxref=Genbank:WP_038401497.1;Name=WP_038401497.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038401497.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4733556 4735223 . - . ID=gene4269;Name=DJ40_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21445;old_locus_tag=DJ40_4215 NZ_CP008943.1 Protein Homology CDS 4733556 4735223 . - 0 ID=cds4162;Parent=gene4269;Dbxref=Genbank:WP_038401498.1;Name=WP_038401498.1;gbkey=CDS;product=pectate lyase;protein_id=WP_038401498.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4735569 4736330 . - . ID=gene4270;Name=DJ40_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21450;old_locus_tag=DJ40_4216 NZ_CP008943.1 Protein Homology CDS 4735569 4736330 . - 0 ID=cds4163;Parent=gene4270;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4736422 4737258 . - . ID=gene4271;Name=DJ40_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21455;old_locus_tag=DJ40_4217 NZ_CP008943.1 Protein Homology CDS 4736422 4737258 . - 0 ID=cds4164;Parent=gene4271;Dbxref=Genbank:WP_002210829.1;Name=WP_002210829.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_002210829.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4737594 4737926 . + . ID=gene4272;Name=DJ40_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21460;old_locus_tag=DJ40_4218 NZ_CP008943.1 Protein Homology CDS 4737594 4737926 . + 0 ID=cds4165;Parent=gene4272;Dbxref=Genbank:WP_012105016.1;Name=WP_012105016.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_012105016.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4738127 4738792 . - . ID=gene4273;Name=DJ40_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21465;old_locus_tag=DJ40_4219 NZ_CP008943.1 Protein Homology CDS 4738127 4738792 . - 0 ID=cds4166;Parent=gene4273;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4739203 4739757 . + . ID=gene4274;Name=DJ40_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21470;old_locus_tag=DJ40_4220 NZ_CP008943.1 Protein Homology CDS 4739203 4739757 . + 0 ID=cds4167;Parent=gene4274;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4739886 4740761 . - . ID=gene4275;Name=DJ40_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21475;old_locus_tag=DJ40_4221 NZ_CP008943.1 Protein Homology CDS 4739886 4740761 . - 0 ID=cds4168;Parent=gene4275;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4740786 4740998 . - . ID=gene4276;Name=DJ40_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21480 NZ_CP008943.1 Protein Homology CDS 4740786 4740998 . - 0 ID=cds4169;Parent=gene4276;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4741066 4741959 . - . ID=gene4277;Name=DJ40_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21485;old_locus_tag=DJ40_4222 NZ_CP008943.1 Protein Homology CDS 4741066 4741959 . - 0 ID=cds4170;Parent=gene4277;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4741956 4742840 . - . ID=gene4278;Name=DJ40_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21490;old_locus_tag=DJ40_4223 NZ_CP008943.1 Protein Homology CDS 4741956 4742840 . - 0 ID=cds4171;Parent=gene4278;Dbxref=Genbank:WP_011192548.1;Name=WP_011192548.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192548.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4742840 4743730 . - . ID=gene4279;Name=DJ40_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21495;old_locus_tag=DJ40_4224 NZ_CP008943.1 Protein Homology CDS 4742840 4743730 . - 0 ID=cds4172;Parent=gene4279;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4743727 4744695 . - . ID=gene4280;Name=DJ40_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21500;old_locus_tag=DJ40_4225 NZ_CP008943.1 Protein Homology CDS 4743727 4744695 . - 0 ID=cds4173;Parent=gene4280;Dbxref=Genbank:WP_038401500.1;Name=WP_038401500.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_038401500.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4744907 4745569 . + . ID=gene4281;Name=DJ40_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21505;old_locus_tag=DJ40_4226 NZ_CP008943.1 Protein Homology CDS 4744907 4745569 . + 0 ID=cds4174;Parent=gene4281;Dbxref=Genbank:WP_024062912.1;Name=WP_024062912.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_024062912.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4745790 4746554 . - . ID=gene4282;Name=DJ40_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21510;old_locus_tag=DJ40_4227 NZ_CP008943.1 Protein Homology CDS 4745790 4746554 . - 0 ID=cds4175;Parent=gene4282;Dbxref=Genbank:WP_038401502.1;Name=WP_038401502.1;gbkey=CDS;product=restriction endonuclease subunit M;protein_id=WP_038401502.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4746705 4747043 . - . ID=gene4283;Name=DJ40_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21515;old_locus_tag=DJ40_4228 NZ_CP008943.1 Protein Homology CDS 4746705 4747043 . - 0 ID=cds4176;Parent=gene4283;Dbxref=Genbank:WP_038401505.1;Name=WP_038401505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401505.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4747052 4747843 . - . ID=gene4284;Name=DJ40_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21520;old_locus_tag=DJ40_4229 NZ_CP008943.1 Protein Homology CDS 4747052 4747843 . - 0 ID=cds4177;Parent=gene4284;Dbxref=Genbank:WP_038401507.1;Name=WP_038401507.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401507.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4747854 4748363 . - . ID=gene4285;Name=DJ40_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21525;old_locus_tag=DJ40_4230 NZ_CP008943.1 Protein Homology CDS 4747854 4748363 . - 0 ID=cds4178;Parent=gene4285;Dbxref=Genbank:WP_049862800.1;Name=WP_049862800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862800.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4748360 4749016 . - . ID=gene4286;Name=DJ40_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21530 NZ_CP008943.1 Protein Homology CDS 4748360 4749016 . - 0 ID=cds4179;Parent=gene4286;Dbxref=Genbank:WP_049862801.1;Name=WP_049862801.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862801.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4749009 4750130 . - . ID=gene4287;Name=DJ40_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21535;old_locus_tag=DJ40_4232 NZ_CP008943.1 Protein Homology CDS 4749009 4750130 . - 0 ID=cds4180;Parent=gene4287;Dbxref=Genbank:WP_038401510.1;Name=WP_038401510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401510.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4750108 4750482 . - . ID=gene4288;Name=DJ40_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21540;old_locus_tag=DJ40_4233 NZ_CP008943.1 Protein Homology CDS 4750108 4750482 . - 0 ID=cds4181;Parent=gene4288;Dbxref=Genbank:WP_038401512.1;Name=WP_038401512.1;gbkey=CDS;product=baseplate protein;protein_id=WP_038401512.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4750536 4751081 . - . ID=gene4289;Name=DJ40_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21545 NZ_CP008943.1 Protein Homology CDS 4750536 4751081 . - 0 ID=cds4182;Parent=gene4289;Dbxref=Genbank:WP_049862802.1;Name=WP_049862802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862802.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4751147 4752178 . - . ID=gene4290;Name=DJ40_RS21550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21550;old_locus_tag=DJ40_4235;partial=true;pseudo=true;start_range=.,4751147 NZ_CP008943.1 Protein Homology CDS 4751147 4752178 . - 0 ID=cds4183;Parent=gene4290;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=late control protein D;pseudo=true;start_range=.,4751147;transl_table=11 NZ_CP008943.1 RefSeq gene 4752175 4752390 . - . ID=gene4291;Name=DJ40_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21555;old_locus_tag=DJ40_4236 NZ_CP008943.1 Protein Homology CDS 4752175 4752390 . - 0 ID=cds4184;Parent=gene4291;Dbxref=Genbank:WP_038401514.1;Name=WP_038401514.1;gbkey=CDS;product=membrane protein;protein_id=WP_038401514.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4752390 4753241 . - . ID=gene4292;Name=DJ40_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21950;old_locus_tag=DJ40_4237 NZ_CP008943.1 Protein Homology CDS 4752390 4753241 . - 0 ID=cds4185;Parent=gene4292;Dbxref=Genbank:WP_049862803.1;Name=WP_049862803.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_049862803.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4753238 4754188 . - . ID=gene4293;Name=DJ40_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21565;old_locus_tag=DJ40_4238 NZ_CP008943.1 Protein Homology CDS 4753238 4754188 . - 0 ID=cds4186;Parent=gene4293;Dbxref=Genbank:WP_038401516.1;Name=WP_038401516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401516.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4754253 4754690 . + . ID=gene4294;Name=DJ40_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21570;old_locus_tag=DJ40_4239 NZ_CP008943.1 Protein Homology CDS 4754253 4754690 . + 0 ID=cds4187;Parent=gene4294;Dbxref=Genbank:WP_038401518.1;Name=WP_038401518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401518.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4754721 4755098 . + . ID=gene4295;Name=DJ40_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21575;old_locus_tag=DJ40_4240 NZ_CP008943.1 Protein Homology CDS 4754721 4755098 . + 0 ID=cds4188;Parent=gene4295;Dbxref=Genbank:WP_038401520.1;Name=WP_038401520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401520.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4755403 4756110 . - . ID=gene4296;Name=DJ40_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21580;old_locus_tag=DJ40_4241 NZ_CP008943.1 Protein Homology CDS 4755403 4756110 . - 0 ID=cds4189;Parent=gene4296;Dbxref=Genbank:WP_038401522.1;Name=WP_038401522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038401522.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4756429 4756680 . + . ID=gene4297;Name=DJ40_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21585;old_locus_tag=DJ40_4242 NZ_CP008943.1 Protein Homology CDS 4756429 4756680 . + 0 ID=cds4190;Parent=gene4297;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4756752 4757129 . - . ID=gene4298;Name=DJ40_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21590 NZ_CP008943.1 Protein Homology CDS 4756752 4757129 . - 0 ID=cds4191;Parent=gene4298;Dbxref=Genbank:WP_011192547.1;Name=WP_011192547.1;gbkey=CDS;product=membrane protein;protein_id=WP_011192547.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4757439 4757651 . - . ID=gene4299;Name=DJ40_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21595;old_locus_tag=DJ40_4243 NZ_CP008943.1 Protein Homology CDS 4757439 4757651 . - 0 ID=cds4192;Parent=gene4299;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4758042 4759970 . + . ID=gene4300;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=DJ40_RS21600;old_locus_tag=DJ40_4244 NZ_CP008943.1 Protein Homology CDS 4758042 4759970 . + 0 ID=cds4193;Parent=gene4300;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4760175 4760525 . + . ID=gene4301;Name=DJ40_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21605;old_locus_tag=DJ40_4245 NZ_CP008943.1 Protein Homology CDS 4760175 4760525 . + 0 ID=cds4194;Parent=gene4301;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4760622 4760819 . + . ID=gene4302;Name=DJ40_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21610;old_locus_tag=DJ40_4246 NZ_CP008943.1 Protein Homology CDS 4760622 4760819 . + 0 ID=cds4195;Parent=gene4302;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4760857 4761213 . + . ID=gene4303;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=DJ40_RS21615;old_locus_tag=DJ40_4247 NZ_CP008943.1 Protein Homology CDS 4760857 4761213 . + 0 ID=cds4196;Parent=gene4303;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4761712 4762695 . + . ID=gene4304;Name=DJ40_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21620;old_locus_tag=DJ40_4248 NZ_CP008943.1 Protein Homology CDS 4761712 4762695 . + 0 ID=cds4197;Parent=gene4304;Dbxref=Genbank:WP_011192546.1;Name=WP_011192546.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_011192546.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4762709 4765096 . + . ID=gene4305;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=DJ40_RS21625;old_locus_tag=DJ40_4249 NZ_CP008943.1 Protein Homology CDS 4762709 4765096 . + 0 ID=cds4198;Parent=gene4305;Dbxref=Genbank:WP_012105021.1;Name=WP_012105021.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_012105021.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4765101 4765397 . + . ID=gene4306;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=DJ40_RS21630;old_locus_tag=DJ40_4250 NZ_CP008943.1 Protein Homology CDS 4765101 4765397 . + 0 ID=cds4199;Parent=gene4306;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4765731 4766189 . + . ID=gene4307;Name=DJ40_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21635;old_locus_tag=DJ40_4251 NZ_CP008943.1 Protein Homology CDS 4765731 4766189 . + 0 ID=cds4200;Parent=gene4307;Dbxref=Genbank:WP_012105022.1;Name=WP_012105022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012105022.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4766398 4767405 . + . ID=gene4308;Name=DJ40_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21640;old_locus_tag=DJ40_4252 NZ_CP008943.1 Protein Homology CDS 4766398 4767405 . + 0 ID=cds4201;Parent=gene4308;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4767475 4768029 . + . ID=gene4309;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=DJ40_RS21645;old_locus_tag=DJ40_4253 NZ_CP008943.1 Protein Homology CDS 4767475 4768029 . + 0 ID=cds4202;Parent=gene4309;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4768054 4768812 . + . ID=gene4310;Name=DJ40_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21650;old_locus_tag=DJ40_4254 NZ_CP008943.1 Protein Homology CDS 4768054 4768812 . + 0 ID=cds4203;Parent=gene4310;Dbxref=Genbank:WP_002211826.1;Name=WP_002211826.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_002211826.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4769162 4770316 . + . ID=gene4311;Name=DJ40_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21655;old_locus_tag=DJ40_4255 NZ_CP008943.1 Protein Homology CDS 4769162 4770316 . + 0 ID=cds4204;Parent=gene4311;Dbxref=Genbank:WP_002211825.1;Name=WP_002211825.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_002211825.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4770303 4771286 . + . ID=gene4312;Name=DJ40_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21660;old_locus_tag=DJ40_4256 NZ_CP008943.1 Protein Homology CDS 4770303 4771286 . + 0 ID=cds4205;Parent=gene4312;Dbxref=Genbank:WP_038401524.1;Name=WP_038401524.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_038401524.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4771283 4773286 . + . ID=gene4313;Name=DJ40_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21665;old_locus_tag=DJ40_4257 NZ_CP008943.1 Protein Homology CDS 4771283 4773286 . + 0 ID=cds4206;Parent=gene4313;Dbxref=Genbank:WP_011192542.1;Name=WP_011192542.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_011192542.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4773283 4774188 . + . ID=gene4314;Name=DJ40_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21670;old_locus_tag=DJ40_4258 NZ_CP008943.1 Protein Homology CDS 4773283 4774188 . + 0 ID=cds4207;Parent=gene4314;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4774185 4775849 . + . ID=gene4315;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=DJ40_RS21675;old_locus_tag=DJ40_4259 NZ_CP008943.1 Protein Homology CDS 4774185 4775849 . + 0 ID=cds4208;Parent=gene4315;Dbxref=Genbank:WP_032466458.1;Name=WP_032466458.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=WP_032466458.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4775846 4776190 . + . ID=gene4316;Name=DJ40_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21680;old_locus_tag=DJ40_4260 NZ_CP008943.1 Protein Homology CDS 4775846 4776190 . + 0 ID=cds4209;Parent=gene4316;Dbxref=Genbank:WP_002211820.1;Name=WP_002211820.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002211820.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4776257 4776571 . + . ID=gene4317;Name=DJ40_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21685 NZ_CP008943.1 Protein Homology CDS 4776257 4776571 . + 0 ID=cds4210;Parent=gene4317;Dbxref=Genbank:WP_049862817.1;Name=WP_049862817.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;protein_id=WP_049862817.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4776851 4777315 . + . ID=gene4318;Name=DJ40_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21690 NZ_CP008943.1 Protein Homology CDS 4776851 4777315 . + 0 ID=cds4211;Parent=gene4318;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4777440 4778456 . + . ID=gene4319;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=DJ40_RS21695;old_locus_tag=DJ40_4263 NZ_CP008943.1 Protein Homology CDS 4777440 4778456 . + 0 ID=cds4212;Parent=gene4319;Dbxref=Genbank:WP_032466454.1;Name=WP_032466454.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_032466454.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4778508 4779971 . + . ID=gene4320;Name=DJ40_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21700;old_locus_tag=DJ40_4264 NZ_CP008943.1 Protein Homology CDS 4778508 4779971 . + 0 ID=cds4213;Parent=gene4320;Dbxref=Genbank:WP_011192539.1;Name=WP_011192539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011192539.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4780140 4781186 . - . ID=gene4321;Name=DJ40_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21705;old_locus_tag=DJ40_4265 NZ_CP008943.1 Protein Homology CDS 4780140 4781186 . - 0 ID=cds4214;Parent=gene4321;Dbxref=Genbank:WP_032466452.1;Name=WP_032466452.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_032466452.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4781343 4782164 . - . ID=gene4322;Name=DJ40_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21710;old_locus_tag=DJ40_4266 NZ_CP008943.1 Protein Homology CDS 4781343 4782164 . - 0 ID=cds4215;Parent=gene4322;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4782501 4784885 . + . ID=gene4323;Name=DJ40_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21715;old_locus_tag=DJ40_4267 NZ_CP008943.1 Protein Homology CDS 4782501 4784885 . + 0 ID=cds4216;Parent=gene4323;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4785485 4786588 . - . ID=gene4324;Name=DJ40_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21720;old_locus_tag=DJ40_4268 NZ_CP008943.1 Protein Homology CDS 4785485 4786588 . - 0 ID=cds4217;Parent=gene4324;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4787235 4790291 . + . ID=gene4325;Name=DJ40_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21725;old_locus_tag=DJ40_4269 NZ_CP008943.1 Protein Homology CDS 4787235 4790291 . + 0 ID=cds4218;Parent=gene4325;Dbxref=Genbank:WP_032466451.1;Name=WP_032466451.1;gbkey=CDS;product=membrane protein;protein_id=WP_032466451.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4790429 4790845 . + . ID=gene4326;Name=DJ40_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21730;old_locus_tag=DJ40_4270 NZ_CP008943.1 Protein Homology CDS 4790429 4790845 . + 0 ID=cds4219;Parent=gene4326;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4791125 4791283 . + . ID=gene4327;Name=DJ40_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21735 NZ_CP008943.1 Protein Homology CDS 4791125 4791283 . + 0 ID=cds4220;Parent=gene4327;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4791461 4791832 . + . ID=gene4328;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=DJ40_RS21740;old_locus_tag=DJ40_4271 NZ_CP008943.1 Protein Homology CDS 4791461 4791832 . + 0 ID=cds4221;Parent=gene4328;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4791847 4793358 . + . ID=gene4329;Name=DJ40_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21745;old_locus_tag=DJ40_4272 NZ_CP008943.1 Protein Homology CDS 4791847 4793358 . + 0 ID=cds4222;Parent=gene4329;Dbxref=Genbank:WP_011192536.1;Name=WP_011192536.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=cysteine desulfurase activator complex subunit SufB;protein_id=WP_011192536.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4793543 4794289 . + . ID=gene4330;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=DJ40_RS21750;old_locus_tag=DJ40_4273 NZ_CP008943.1 Protein Homology CDS 4793543 4794289 . + 0 ID=cds4223;Parent=gene4330;Dbxref=Genbank:WP_011192535.1;Name=WP_011192535.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_011192535.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4794264 4795589 . + . ID=gene4331;Name=DJ40_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21755;old_locus_tag=DJ40_4274 NZ_CP008943.1 Protein Homology CDS 4794264 4795589 . + 0 ID=cds4224;Parent=gene4331;Dbxref=Genbank:WP_038401529.1;Name=WP_038401529.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_038401529.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4795586 4796806 . + . ID=gene4332;Name=DJ40_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21760;old_locus_tag=DJ40_4275 NZ_CP008943.1 Protein Homology CDS 4795586 4796806 . + 0 ID=cds4225;Parent=gene4332;Dbxref=Genbank:WP_002211805.1;Name=WP_002211805.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002211805.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4796895 4797317 . + . ID=gene4333;Name=DJ40_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21765;old_locus_tag=DJ40_4276 NZ_CP008943.1 Protein Homology CDS 4796895 4797317 . + 0 ID=cds4226;Parent=gene4333;Dbxref=Genbank:WP_002211804.1;Name=WP_002211804.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4797588 4798652 . + . ID=gene4334;Name=DJ40_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21770;old_locus_tag=DJ40_4277 NZ_CP008943.1 Protein Homology CDS 4797588 4798652 . + 0 ID=cds4227;Parent=gene4334;Dbxref=Genbank:WP_002223648.1;Name=WP_002223648.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002223648.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4799012 4799248 . - . ID=gene4335;Name=DJ40_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21775;old_locus_tag=DJ40_4278 NZ_CP008943.1 Protein Homology CDS 4799012 4799248 . - 0 ID=cds4228;Parent=gene4335;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4799569 4800981 . - . ID=gene4336;Name=DJ40_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21780;old_locus_tag=DJ40_4279 NZ_CP008943.1 Protein Homology CDS 4799569 4800981 . - 0 ID=cds4229;Parent=gene4336;Dbxref=Genbank:WP_002210936.1;Name=WP_002210936.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002210936.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4801560 4801636 . - . ID=gene4337;Name=DJ40_RS21785;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS21785;old_locus_tag=DJ40_4280 NZ_CP008943.1 tRNAscan-SE tRNA 4801560 4801636 . - . ID=rna98;Parent=gene4337;anticodon=(pos:complement(4801600..4801602));gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 tRNAscan-SE exon 4801560 4801636 . - . ID=id347;Parent=rna98;anticodon=(pos:complement(4801600..4801602));gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 RefSeq gene 4801806 4801882 . - . ID=gene4338;Name=DJ40_RS21790;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS21790;old_locus_tag=DJ40_4282 NZ_CP008943.1 tRNAscan-SE tRNA 4801806 4801882 . - . ID=rna99;Parent=gene4338;anticodon=(pos:complement(4801846..4801848));gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 tRNAscan-SE exon 4801806 4801882 . - . ID=id348;Parent=rna99;anticodon=(pos:complement(4801846..4801848));gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 RefSeq gene 4801942 4802018 . - . ID=gene4339;Name=DJ40_RS21795;gbkey=Gene;gene_biotype=tRNA;locus_tag=DJ40_RS21795;old_locus_tag=DJ40_4283 NZ_CP008943.1 tRNAscan-SE tRNA 4801942 4802018 . - . ID=rna100;Parent=gene4339;anticodon=(pos:complement(4801982..4801984));gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 tRNAscan-SE exon 4801942 4802018 . - . ID=id349;Parent=rna100;anticodon=(pos:complement(4801982..4801984));gbkey=tRNA;product=tRNA-Val NZ_CP008943.1 RefSeq gene 4802260 4803633 . - . ID=gene4340;Name=DJ40_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21800;old_locus_tag=DJ40_4284 NZ_CP008943.1 Protein Homology CDS 4802260 4803633 . - 0 ID=cds4230;Parent=gene4340;Dbxref=Genbank:WP_002210937.1;Name=WP_002210937.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_002210937.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4803882 4804538 . + . ID=gene4341;Name=DJ40_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DJ40_RS21805;old_locus_tag=DJ40_4285 NZ_CP008943.1 Protein Homology CDS 4803882 4804538 . + 0 ID=cds4231;Parent=gene4341;Dbxref=Genbank:WP_011192532.1;Name=WP_011192532.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_011192532.1;transl_table=11 NZ_CP008943.1 RefSeq gene 4804589 4805741 . - . ID=gene4342;Name=DJ40_RS21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DJ40_RS21810;pseudo=true NZ_CP008943.1 Protein Homology CDS 4804589 4805741 . - 0 ID=cds4232;Parent=gene4342;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;pseudo=true;transl_table=11 ###