locus-tag class description YPSIP31758_RS00040 PF02705 K+ potassium transporter YPSIP31758_RS00135 PF01367 5'-3' exonuclease, C-terminal SAM fold YPSIP31758_RS00135 PF01612 3'-5' exonuclease YPSIP31758_RS00135 PF00476 DNA polymerase family A YPSIP31758_RS00135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YPSIP31758_RS00220 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS00220 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS00220 PF00679 Elongation factor G C-terminus YPSIP31758_RS00225 PF00679 Elongation factor G C-terminus YPSIP31758_RS00225 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS00225 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS00280 PF00625 Guanylate kinase YPSIP31758_RS00295 PF03120 NAD-dependent DNA ligase OB-fold domain YPSIP31758_RS00295 PF01653 NAD-dependent DNA ligase adenylation domain YPSIP31758_RS00595 PF01653 NAD-dependent DNA ligase adenylation domain YPSIP31758_RS00595 PF03120 NAD-dependent DNA ligase OB-fold domain YPSIP31758_RS00760 PF01676 Metalloenzyme superfamily YPSIP31758_RS00760 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YPSIP31758_RS00765 PF01676 Metalloenzyme superfamily YPSIP31758_RS00765 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YPSIP31758_RS00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS00805 PF16527 Two-component sensor protein CpxA, periplasmic domain YPSIP31758_RS00805 PF00672 HAMP domain YPSIP31758_RS00805 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS00935 PF00005 ABC transporter YPSIP31758_RS00935 PF03412 Peptidase C39 family YPSIP31758_RS00935 PF00664 ABC transporter transmembrane region YPSIP31758_RS00965 PF01040 UbiA prenyltransferase family YPSIP31758_RS01000 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS01000 PF18319 PriA DNA helicase Cys-rich region (CRR) domain YPSIP31758_RS01000 PF18074 Primosomal protein N C-terminal domain YPSIP31758_RS01000 PF17764 3′ DNA-binding domain (3′BD) YPSIP31758_RS01000 PF00270 DEAD/DEAH box helicase YPSIP31758_RS01035 PF03447 Homoserine dehydrogenase, NAD binding domain YPSIP31758_RS01035 PF00742 Homoserine dehydrogenase YPSIP31758_RS01035 PF00696 Amino acid kinase family YPSIP31758_RS01045 PF02219 Methylenetetrahydrofolate reductase YPSIP31758_RS01270 PF00258 Flavodoxin YPSIP31758_RS01275 PF01037 Lrp/AsnC ligand binding domain YPSIP31758_RS01280 PF03590 Aspartate-ammonia ligase YPSIP31758_RS01285 PF05762 VWA domain containing CoxE-like protein YPSIP31758_RS01290 PF07728 AAA domain (dynein-related subfamily) YPSIP31758_RS01290 PF12592 Protein of unknown function (DUF3763) YPSIP31758_RS01290 PF17868 AAA lid domain YPSIP31758_RS01295 PF02705 K+ potassium transporter YPSIP31758_RS01300 PF05025 RbsD / FucU transport protein family YPSIP31758_RS01305 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS01315 PF07690 Major Facilitator Superfamily YPSIP31758_RS01320 PF07729 FCD domain YPSIP31758_RS01320 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS01350 PF00872 Transposase, Mutator family YPSIP31758_RS01355 PF03205 Molybdopterin guanine dinucleotide synthesis protein B YPSIP31758_RS01360 PF12804 MobA-like NTP transferase domain YPSIP31758_RS01365 PF06288 Protein of unknown function (DUF1040) YPSIP31758_RS01370 PF01636 Phosphotransferase enzyme family YPSIP31758_RS01375 PF01323 DSBA-like thioredoxin domain YPSIP31758_RS01380 PF01367 5'-3' exonuclease, C-terminal SAM fold YPSIP31758_RS01380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YPSIP31758_RS01380 PF00476 DNA polymerase family A YPSIP31758_RS01380 PF01612 3'-5' exonuclease YPSIP31758_RS01385 PF01926 50S ribosome-binding GTPase YPSIP31758_RS01395 PF04220 Der GTPase activator (YihI) YPSIP31758_RS01400 PF06969 HemN C-terminal domain YPSIP31758_RS01400 PF04055 Radical SAM superfamily YPSIP31758_RS01405 PF00158 Sigma-54 interaction domain YPSIP31758_RS01405 PF00072 Response regulator receiver domain YPSIP31758_RS01405 PF02954 Bacterial regulatory protein, Fis family YPSIP31758_RS01410 PF00989 PAS fold YPSIP31758_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS01410 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS01415 PF00120 Glutamine synthetase, catalytic domain YPSIP31758_RS01415 PF03951 Glutamine synthetase, beta-Grasp domain YPSIP31758_RS01425 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS01425 PF00679 Elongation factor G C-terminus YPSIP31758_RS01425 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS01430 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS01435 PF03631 Virulence factor BrkB YPSIP31758_RS01440 PF02580 D-Tyr-tRNA(Tyr) deacylase YPSIP31758_RS01445 PF00583 Acetyltransferase (GNAT) family YPSIP31758_RS01445 PF09500 Putative thioesterase (yiiD_Cterm) YPSIP31758_RS01450 PF05170 AsmA family YPSIP31758_RS01455 PF00860 Permease family YPSIP31758_RS01460 PF03616 Sodium/glutamate symporter YPSIP31758_RS01465 PF00270 DEAD/DEAH box helicase YPSIP31758_RS01465 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS01465 PF17191 RecG wedge domain YPSIP31758_RS01470 PF12105 SpoU, rRNA methylase, C-terminal YPSIP31758_RS01470 PF00588 SpoU rRNA Methylase family YPSIP31758_RS01475 PF04607 Region found in RelA / SpoT proteins YPSIP31758_RS01475 PF02824 TGS domain YPSIP31758_RS01475 PF13291 ACT domain YPSIP31758_RS01480 PF01192 RNA polymerase Rpb6 YPSIP31758_RS01485 PF00625 Guanylate kinase YPSIP31758_RS01490 PF03120 NAD-dependent DNA ligase OB-fold domain YPSIP31758_RS01490 PF01653 NAD-dependent DNA ligase adenylation domain YPSIP31758_RS01495 PF03458 UPF0126 domain YPSIP31758_RS01530 PF05638 Type VI secretion system effector, Hcp YPSIP31758_RS01570 PF08340 Domain of unknown function (DUF1732) YPSIP31758_RS01570 PF03755 YicC-like family, N-terminal region YPSIP31758_RS01575 PF01138 3' exoribonuclease family, domain 1 YPSIP31758_RS01575 PF03725 3' exoribonuclease family, domain 2 YPSIP31758_RS01580 PF00156 Phosphoribosyl transferase domain YPSIP31758_RS01585 PF00440 Bacterial regulatory proteins, tetR family YPSIP31758_RS01590 PF00692 dUTPase YPSIP31758_RS01595 PF04127 DNA / pantothenate metabolism flavoprotein YPSIP31758_RS01595 PF02441 Flavoprotein YPSIP31758_RS01600 PF04002 RadC-like JAB domain YPSIP31758_RS01605 PF00830 Ribosomal L28 family YPSIP31758_RS01610 PF00471 Ribosomal protein L33 YPSIP31758_RS01615 PF06827 Zinc finger found in FPG and IleRS YPSIP31758_RS01615 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YPSIP31758_RS01615 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YPSIP31758_RS01620 PF01467 Cytidylyltransferase-like YPSIP31758_RS01625 PF00535 Glycosyl transferase family 2 YPSIP31758_RS01630 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YPSIP31758_RS01635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YPSIP31758_RS01640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YPSIP31758_RS01645 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS01650 PF00155 Aminotransferase class I and II YPSIP31758_RS01655 PF08240 Alcohol dehydrogenase GroES-like domain YPSIP31758_RS01655 PF00107 Zinc-binding dehydrogenase YPSIP31758_RS01660 PF04748 Divergent polysaccharide deacetylase YPSIP31758_RS01665 PF01551 Peptidase family M23 YPSIP31758_RS01670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YPSIP31758_RS01670 PF01676 Metalloenzyme superfamily YPSIP31758_RS01675 PF00581 Rhodanese-like domain YPSIP31758_RS01680 PF00462 Glutaredoxin YPSIP31758_RS01685 PF02556 Preprotein translocase subunit SecB YPSIP31758_RS01690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YPSIP31758_RS01690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YPSIP31758_RS01700 PF06426 Serine acetyltransferase, N-terminal YPSIP31758_RS01700 PF00132 Bacterial transferase hexapeptide (six repeats) YPSIP31758_RS01705 PF00588 SpoU rRNA Methylase family YPSIP31758_RS01710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YPSIP31758_RS01710 PF12833 Helix-turn-helix domain YPSIP31758_RS01710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YPSIP31758_RS01710 PF02805 Metal binding domain of Ada YPSIP31758_RS01715 PF00672 HAMP domain YPSIP31758_RS01715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS01715 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS01715 PF16527 Two-component sensor protein CpxA, periplasmic domain YPSIP31758_RS01720 PF00072 Response regulator receiver domain YPSIP31758_RS01720 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS01725 PF07813 LTXXQ motif family protein YPSIP31758_RS01730 PF04754 Putative transposase, YhgA-like YPSIP31758_RS01735 PF01545 Cation efflux family YPSIP31758_RS01735 PF16916 Dimerisation domain of Zinc Transporter YPSIP31758_RS01740 PF00365 Phosphofructokinase YPSIP31758_RS01755 PF00939 Sodium:sulfate symporter transmembrane region YPSIP31758_RS01760 PF03737 Aldolase/RraA YPSIP31758_RS01765 PF02585 GlcNAc-PI de-N-acetylase YPSIP31758_RS01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS01770 PF03466 LysR substrate binding domain YPSIP31758_RS01775 PF00121 Triosephosphate isomerase YPSIP31758_RS01780 PF07305 Protein of unknown function (DUF1454) YPSIP31758_RS01785 PF05656 Protein of unknown function (DUF805) YPSIP31758_RS01790 PF00970 Oxidoreductase FAD-binding domain YPSIP31758_RS01790 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS01795 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded YPSIP31758_RS01800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS01800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS01805 PF00230 Major intrinsic protein YPSIP31758_RS01815 PF06005 Cell division protein ZapB YPSIP31758_RS01820 PF00005 ABC transporter YPSIP31758_RS01820 PF00664 ABC transporter transmembrane region YPSIP31758_RS01820 PF03412 Peptidase C39 family YPSIP31758_RS01825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS01825 PF00529 HlyD membrane-fusion protein of T1SS YPSIP31758_RS01845 PF03737 Aldolase/RraA YPSIP31758_RS01850 PF01040 UbiA prenyltransferase family YPSIP31758_RS01855 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS01855 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS01855 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS01860 PF00227 Proteasome subunit YPSIP31758_RS01865 PF05036 Sporulation related domain YPSIP31758_RS01870 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS01880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain YPSIP31758_RS01880 PF18074 Primosomal protein N C-terminal domain YPSIP31758_RS01880 PF17764 3′ DNA-binding domain (3′BD) YPSIP31758_RS01880 PF00270 DEAD/DEAH box helicase YPSIP31758_RS01880 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS01885 PF01197 Ribosomal protein L31 YPSIP31758_RS01890 PF05360 yiaA/B two helix domain YPSIP31758_RS01900 PF01340 Met Apo-repressor, MetJ YPSIP31758_RS01905 PF01053 Cys/Met metabolism PLP-dependent enzyme YPSIP31758_RS01910 PF00696 Amino acid kinase family YPSIP31758_RS01910 PF03447 Homoserine dehydrogenase, NAD binding domain YPSIP31758_RS01910 PF00742 Homoserine dehydrogenase YPSIP31758_RS01915 PF02219 Methylenetetrahydrofolate reductase YPSIP31758_RS01920 PF00311 Phosphoenolpyruvate carboxylase YPSIP31758_RS01925 PF07687 Peptidase dimerisation domain YPSIP31758_RS01925 PF01546 Peptidase family M20/M25/M40 YPSIP31758_RS01930 PF02774 Semialdehyde dehydrogenase, dimerisation domain YPSIP31758_RS01930 PF01118 Semialdehyde dehydrogenase, NAD binding domain YPSIP31758_RS01935 PF00696 Amino acid kinase family YPSIP31758_RS01940 PF00206 Lyase YPSIP31758_RS01940 PF14698 Argininosuccinate lyase C-terminal YPSIP31758_RS01950 PF00593 TonB dependent receptor YPSIP31758_RS01950 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS01960 PF00664 ABC transporter transmembrane region YPSIP31758_RS01960 PF00005 ABC transporter YPSIP31758_RS01965 PF00529 HlyD membrane-fusion protein of T1SS YPSIP31758_RS01970 PF03544 Gram-negative bacterial TonB protein C-terminal YPSIP31758_RS01975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPSIP31758_RS01975 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS01980 PF00462 Glutaredoxin YPSIP31758_RS01980 PF08534 Redoxin YPSIP31758_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS01985 PF03466 LysR substrate binding domain YPSIP31758_RS01990 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS01990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPSIP31758_RS01995 PF00440 Bacterial regulatory proteins, tetR family YPSIP31758_RS02000 PF07226 Protein of unknown function (DUF1422) YPSIP31758_RS02005 PF05958 tRNA (Uracil-5-)-methyltransferase YPSIP31758_RS02015 PF00593 TonB dependent receptor YPSIP31758_RS02015 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS02020 PF01177 Asp/Glu/Hydantoin racemase YPSIP31758_RS02060 PF13407 Periplasmic binding protein domain YPSIP31758_RS02065 PF00005 ABC transporter YPSIP31758_RS02070 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS02075 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS02080 PF03466 LysR substrate binding domain YPSIP31758_RS02085 PF04219 Protein of unknown function, DUF YPSIP31758_RS02090 PF01078 Magnesium chelatase, subunit ChlI YPSIP31758_RS02090 PF13335 Magnesium chelatase, subunit ChlI C-terminal YPSIP31758_RS02095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPSIP31758_RS02095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPSIP31758_RS02095 PF00205 Thiamine pyrophosphate enzyme, central domain YPSIP31758_RS02105 PF01063 Amino-transferase class IV YPSIP31758_RS02110 PF00920 Dehydratase family YPSIP31758_RS02115 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS02115 PF00585 C-terminal regulatory domain of Threonine dehydratase YPSIP31758_RS02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS02135 PF03466 LysR substrate binding domain YPSIP31758_RS02140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YPSIP31758_RS02140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YPSIP31758_RS02155 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 YPSIP31758_RS02155 PF03515 Colicin-like bacteriocin tRNase domain YPSIP31758_RS02160 PF01320 Colicin immunity protein / pyocin immunity protein YPSIP31758_RS02170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS02170 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS02180 PF13954 PapC N-terminal domain YPSIP31758_RS02180 PF13953 PapC C-terminal domain YPSIP31758_RS02180 PF00577 Outer membrane usher protein YPSIP31758_RS02185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS02185 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS02215 PF00580 UvrD/REP helicase N-terminal domain YPSIP31758_RS02215 PF13361 UvrD-like helicase C-terminal domain YPSIP31758_RS02220 PF02541 Ppx/GppA phosphatase family YPSIP31758_RS02225 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS02225 PF00270 DEAD/DEAH box helicase YPSIP31758_RS02230 PF00085 Thioredoxin YPSIP31758_RS02235 PF07498 Rho termination factor, N-terminal domain YPSIP31758_RS02235 PF07497 Rho termination factor, RNA-binding domain YPSIP31758_RS02235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPSIP31758_RS02245 PF01797 Transposase IS200 like YPSIP31758_RS02250 PF00953 Glycosyl transferase family 4 YPSIP31758_RS02255 PF02706 Chain length determinant protein YPSIP31758_RS02260 PF02350 UDP-N-acetylglucosamine 2-epimerase YPSIP31758_RS02265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YPSIP31758_RS02265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YPSIP31758_RS02265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YPSIP31758_RS02270 PF16363 GDP-mannose 4,6 dehydratase YPSIP31758_RS02275 PF00483 Nucleotidyl transferase YPSIP31758_RS02285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YPSIP31758_RS02290 PF01943 Polysaccharide biosynthesis protein YPSIP31758_RS02295 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 YPSIP31758_RS02300 PF06899 WzyE protein, O-antigen assembly polymerase YPSIP31758_RS02305 PF03808 Glycosyl transferase WecB/TagA/CpsF family YPSIP31758_RS02310 PF00324 Amino acid permease YPSIP31758_RS02335 PF07219 HemY protein N-terminus YPSIP31758_RS02335 PF07719 Tetratricopeptide repeat YPSIP31758_RS02340 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase YPSIP31758_RS02345 PF02602 Uroporphyrinogen-III synthase HemD YPSIP31758_RS02350 PF03900 Porphobilinogen deaminase, C-terminal domain YPSIP31758_RS02350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YPSIP31758_RS02355 PF12633 Adenylate cyclase NT domain YPSIP31758_RS02355 PF01295 Adenylate cyclase, class-I YPSIP31758_RS02365 PF01491 Frataxin-like domain YPSIP31758_RS02370 PF13627 Prokaryotic lipoprotein-attachment site YPSIP31758_RS02375 PF01678 Diaminopimelate epimerase YPSIP31758_RS02380 PF04340 Protein of unknown function, DUF484 YPSIP31758_RS02385 PF02899 Phage integrase, N-terminal SAM-like domain YPSIP31758_RS02385 PF00589 Phage integrase family YPSIP31758_RS02390 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS02395 PF00580 UvrD/REP helicase N-terminal domain YPSIP31758_RS02395 PF13361 UvrD-like helicase C-terminal domain YPSIP31758_RS02410 PF09370 Phosphoenolpyruvate hydrolase-like YPSIP31758_RS02415 PF01544 CorA-like Mg2+ transporter protein YPSIP31758_RS02420 PF00892 EamA-like transporter family YPSIP31758_RS02425 PF03061 Thioesterase superfamily YPSIP31758_RS02430 PF02253 Phospholipase A1 YPSIP31758_RS02435 PF09382 RQC domain YPSIP31758_RS02435 PF00270 DEAD/DEAH box helicase YPSIP31758_RS02435 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS02435 PF00570 HRDC domain YPSIP31758_RS02435 PF16124 RecQ zinc-binding YPSIP31758_RS02440 PF01810 LysE type translocator YPSIP31758_RS02445 PF01810 LysE type translocator YPSIP31758_RS02450 PF12146 Serine aminopeptidase, S33 YPSIP31758_RS02465 PF03009 Glycerophosphoryl diester phosphodiesterase family YPSIP31758_RS02470 PF07690 Major Facilitator Superfamily YPSIP31758_RS02475 PF04324 BFD-like [2Fe-2S] binding domain YPSIP31758_RS02475 PF01266 FAD dependent oxidoreductase YPSIP31758_RS02480 PF00890 FAD binding domain YPSIP31758_RS02485 PF02754 Cysteine-rich domain YPSIP31758_RS02485 PF13183 4Fe-4S dicluster domain YPSIP31758_RS02490 PF08786 DcrB YPSIP31758_RS02495 PF02592 Putative vitamin uptake transporter YPSIP31758_RS02500 PF01206 Sulfurtransferase TusA YPSIP31758_RS02505 PF00403 Heavy-metal-associated domain YPSIP31758_RS02510 PF07947 YhhN family YPSIP31758_RS02525 PF06611 Protein of unknown function (DUF1145) YPSIP31758_RS02540 PF02881 SRP54-type protein, helical bundle domain YPSIP31758_RS02540 PF00448 SRP54-type protein, GTPase domain YPSIP31758_RS02540 PF00448 SRP54-type protein, GTPase domain YPSIP31758_RS02540 PF02881 SRP54-type protein, helical bundle domain YPSIP31758_RS02545 PF00005 ABC transporter YPSIP31758_RS02550 PF18075 FtsX extracellular domain YPSIP31758_RS02550 PF02687 FtsX-like permease family YPSIP31758_RS02555 PF04542 Sigma-70 region 2 YPSIP31758_RS02555 PF04545 Sigma-70, region 4 YPSIP31758_RS02555 PF00140 Sigma-70 factor, region 1.2 YPSIP31758_RS02560 PF12568 Acetyltransferase (GNAT) domain, PanZ YPSIP31758_RS02565 PF13458 Periplasmic binding protein YPSIP31758_RS02570 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS02575 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS02575 PF11862 Domain of unknown function (DUF3382) YPSIP31758_RS02580 PF00005 ABC transporter YPSIP31758_RS02580 PF12399 Branched-chain amino acid ATP-binding cassette transporter YPSIP31758_RS02585 PF00005 ABC transporter YPSIP31758_RS02625 PF13416 Bacterial extracellular solute-binding protein YPSIP31758_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS02640 PF17912 MalK OB fold domain YPSIP31758_RS02640 PF00005 ABC transporter YPSIP31758_RS02645 PF03009 Glycerophosphoryl diester phosphodiesterase family YPSIP31758_RS02650 PF03547 Membrane transport protein YPSIP31758_RS02655 PF00892 EamA-like transporter family YPSIP31758_RS02660 PF03466 LysR substrate binding domain YPSIP31758_RS02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS02665 PF08267 Cobalamin-independent synthase, N-terminal domain YPSIP31758_RS02665 PF01717 Cobalamin-independent synthase, Catalytic domain YPSIP31758_RS02670 PF01738 Dienelactone hydrolase family YPSIP31758_RS02675 PF01048 Phosphorylase superfamily YPSIP31758_RS02685 PF02554 Carbon starvation protein CstA YPSIP31758_RS02685 PF13722 5TM C-terminal transporter carbon starvation CstA YPSIP31758_RS02690 PF09335 SNARE associated Golgi protein YPSIP31758_RS02695 PF02646 RmuC family YPSIP31758_RS02700 PF01209 ubiE/COQ5 methyltransferase family YPSIP31758_RS02705 PF02036 SCP-2 sterol transfer family YPSIP31758_RS02710 PF03109 ABC1 family YPSIP31758_RS02715 PF02416 mttA/Hcf106 family YPSIP31758_RS02725 PF00902 Sec-independent protein translocase protein (TatC) YPSIP31758_RS02730 PF01026 TatD related DNase YPSIP31758_RS02735 PF00490 Delta-aminolevulinic acid dehydratase YPSIP31758_RS02740 PF02357 Transcription termination factor nusG YPSIP31758_RS02745 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YPSIP31758_RS02750 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS02750 PF00970 Oxidoreductase FAD-binding domain YPSIP31758_RS02755 PF00108 Thiolase, N-terminal domain YPSIP31758_RS02755 PF02803 Thiolase, C-terminal domain YPSIP31758_RS02760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YPSIP31758_RS02760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YPSIP31758_RS02760 PF00378 Enoyl-CoA hydratase/isomerase YPSIP31758_RS02765 PF00557 Metallopeptidase family M24 YPSIP31758_RS02770 PF01205 Uncharacterized protein family UPF0029 YPSIP31758_RS02770 PF09186 Domain of unknown function (DUF1949) YPSIP31758_RS02775 PF02386 Cation transport protein YPSIP31758_RS02780 PF12724 Flavodoxin domain YPSIP31758_RS02825 PF00872 Transposase, Mutator family YPSIP31758_RS02835 PF04204 Homoserine O-succinyltransferase YPSIP31758_RS02840 PF01274 Malate synthase YPSIP31758_RS02845 PF00463 Isocitrate lyase family YPSIP31758_RS02850 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) YPSIP31758_RS02855 PF09339 IclR helix-turn-helix domain YPSIP31758_RS02855 PF01614 Bacterial transcriptional regulator YPSIP31758_RS02860 PF02310 B12 binding domain YPSIP31758_RS02860 PF02574 Homocysteine S-methyltransferase YPSIP31758_RS02860 PF02607 B12 binding domain YPSIP31758_RS02860 PF00809 Pterin binding enzyme YPSIP31758_RS02860 PF02965 Vitamin B12 dependent methionine synthase, activation domain YPSIP31758_RS02865 PF13332 Hemagglutinin repeat YPSIP31758_RS02865 PF05860 haemagglutination activity domain YPSIP31758_RS02870 PF17287 POTRA domain YPSIP31758_RS02870 PF08479 POTRA domain, ShlB-type YPSIP31758_RS02870 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPSIP31758_RS02875 PF00696 Amino acid kinase family YPSIP31758_RS02875 PF01842 ACT domain YPSIP31758_RS02880 PF00342 Phosphoglucose isomerase YPSIP31758_RS02885 PF06146 Phosphate-starvation-inducible E YPSIP31758_RS02890 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS02895 PF14785 Maltose transport system permease protein MalF P2 domain YPSIP31758_RS02895 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS02900 PF01547 Bacterial extracellular solute-binding protein YPSIP31758_RS02910 PF17912 MalK OB fold domain YPSIP31758_RS02910 PF00005 ABC transporter YPSIP31758_RS02915 PF02264 LamB porin YPSIP31758_RS02920 PF07148 Maltose operon periplasmic protein precursor (MalM) YPSIP31758_RS02930 PF05638 Type VI secretion system effector, Hcp YPSIP31758_RS02940 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPSIP31758_RS02950 PF05947 Type VI secretion system, TssF YPSIP31758_RS02970 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE YPSIP31758_RS02980 PF17871 AAA lid domain YPSIP31758_RS02980 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS02980 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS02980 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS03010 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS03065 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS03075 PF05593 RHS Repeat YPSIP31758_RS03075 PF03527 RHS protein YPSIP31758_RS03085 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS03095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPSIP31758_RS03095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YPSIP31758_RS03100 PF02311 AraC-like ligand binding domain YPSIP31758_RS03100 PF12833 Helix-turn-helix domain YPSIP31758_RS03105 PF05025 RbsD / FucU transport protein family YPSIP31758_RS03110 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS03115 PF01791 DeoC/LacD family aldolase YPSIP31758_RS03120 PF03358 NADPH-dependent FMN reductase YPSIP31758_RS03125 PF09084 NMT1/THI5 like YPSIP31758_RS03130 PF00296 Luciferase-like monooxygenase YPSIP31758_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS03140 PF00005 ABC transporter YPSIP31758_RS03145 PF04221 RelB antitoxin YPSIP31758_RS03150 PF00860 Permease family YPSIP31758_RS03155 PF00999 Sodium/hydrogen exchanger family YPSIP31758_RS03165 PF03279 Bacterial lipid A biosynthesis acyltransferase YPSIP31758_RS03175 PF00005 ABC transporter YPSIP31758_RS03180 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS03190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS03190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS03195 PF00571 CBS domain YPSIP31758_RS03195 PF01380 SIS domain YPSIP31758_RS03200 PF02798 Glutathione S-transferase, N-terminal domain YPSIP31758_RS03215 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS03220 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS03225 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS03235 PF05433 Glycine zipper 2TM domain YPSIP31758_RS03240 PF00753 Metallo-beta-lactamase superfamily YPSIP31758_RS03245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YPSIP31758_RS03245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YPSIP31758_RS03250 PF02627 Carboxymuconolactone decarboxylase family YPSIP31758_RS03255 PF07690 Major Facilitator Superfamily YPSIP31758_RS03270 PF02954 Bacterial regulatory protein, Fis family YPSIP31758_RS03275 PF01207 Dihydrouridine synthase (Dus) YPSIP31758_RS03285 PF00474 Sodium:solute symporter family YPSIP31758_RS03290 PF06196 Protein of unknown function (DUF997) YPSIP31758_RS03295 PF02785 Biotin carboxylase C-terminal domain YPSIP31758_RS03295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YPSIP31758_RS03295 PF00289 Biotin carboxylase, N-terminal domain YPSIP31758_RS03300 PF00364 Biotin-requiring enzyme YPSIP31758_RS03305 PF01220 Dehydroquinase class II YPSIP31758_RS03310 PF01794 Ferric reductase like transmembrane component YPSIP31758_RS03315 PF00174 Oxidoreductase molybdopterin binding domain YPSIP31758_RS03320 PF08240 Alcohol dehydrogenase GroES-like domain YPSIP31758_RS03320 PF00107 Zinc-binding dehydrogenase YPSIP31758_RS03325 PF00990 Diguanylate cyclase, GGDEF domain YPSIP31758_RS03325 PF17157 Gammaproteobacterial periplasmic sensor domain YPSIP31758_RS03325 PF00563 EAL domain YPSIP31758_RS03335 PF04085 rod shape-determining protein MreC YPSIP31758_RS03340 PF04093 rod shape-determining protein MreD YPSIP31758_RS03345 PF02545 Maf-like protein YPSIP31758_RS03350 PF10150 Ribonuclease E/G family YPSIP31758_RS03350 PF00575 S1 RNA binding domain YPSIP31758_RS03355 PF13116 Protein of unknown function YPSIP31758_RS03355 PF13502 AsmA-like C-terminal region YPSIP31758_RS03360 PF00795 Carbon-nitrogen hydrolase YPSIP31758_RS03365 PF01523 Putative modulator of DNA gyrase YPSIP31758_RS03370 PF18807 Tripartite Tc toxins repeat YPSIP31758_RS03370 PF05785 Rho-activating domain of cytotoxic necrotizing factor YPSIP31758_RS03375 PF18807 Tripartite Tc toxins repeat YPSIP31758_RS03375 PF05785 Rho-activating domain of cytotoxic necrotizing factor YPSIP31758_RS03380 PF18807 Tripartite Tc toxins repeat YPSIP31758_RS03380 PF05785 Rho-activating domain of cytotoxic necrotizing factor YPSIP31758_RS03385 PF18807 Tripartite Tc toxins repeat YPSIP31758_RS03385 PF05785 Rho-activating domain of cytotoxic necrotizing factor YPSIP31758_RS03405 PF03534 Salmonella virulence plasmid 65kDa B protein YPSIP31758_RS03405 PF12255 Insecticide toxin TcdB middle/C-terminal region YPSIP31758_RS03405 PF12256 Insecticide toxin TcdB middle/N-terminal region YPSIP31758_RS03410 PF18413 Neuraminidase-like domain YPSIP31758_RS03410 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain YPSIP31758_RS03420 PF03466 LysR substrate binding domain YPSIP31758_RS03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS03425 PF03466 LysR substrate binding domain YPSIP31758_RS03430 PF07869 Protein of unknown function (DUF1656) YPSIP31758_RS03435 PF13533 Biotin-lipoyl like YPSIP31758_RS03440 PF04632 Fusaric acid resistance protein family YPSIP31758_RS03445 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS03455 PF01337 Barstar (barnase inhibitor) YPSIP31758_RS03460 PF04751 Protein of unknown function (DUF615) YPSIP31758_RS03465 PF01523 Putative modulator of DNA gyrase YPSIP31758_RS03475 PF07361 Cytochrome b562 YPSIP31758_RS03480 PF14760 Rnk N-terminus YPSIP31758_RS03480 PF01272 Transcription elongation factor, GreA/GreB, C-term YPSIP31758_RS03485 PF11941 Domain of unknown function (DUF3459) YPSIP31758_RS03485 PF00128 Alpha amylase, catalytic domain YPSIP31758_RS03490 PF02378 Phosphotransferase system, EIIC YPSIP31758_RS03490 PF00367 phosphotransferase system, EIIB YPSIP31758_RS03495 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS03505 PF01042 Endoribonuclease L-PSP YPSIP31758_RS03510 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain YPSIP31758_RS03510 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain YPSIP31758_RS03515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YPSIP31758_RS03515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YPSIP31758_RS03520 PF00381 PTS HPr component phosphorylation site YPSIP31758_RS03525 PF03668 P-loop ATPase protein family YPSIP31758_RS03530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPSIP31758_RS03535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YPSIP31758_RS03540 PF04963 Sigma-54 factor, core binding domain YPSIP31758_RS03540 PF04552 Sigma-54, DNA binding domain YPSIP31758_RS03540 PF00309 Sigma-54 factor, Activator interacting domain (AID) YPSIP31758_RS03545 PF12399 Branched-chain amino acid ATP-binding cassette transporter YPSIP31758_RS03545 PF00005 ABC transporter YPSIP31758_RS03550 PF03968 OstA-like protein YPSIP31758_RS03555 PF06835 Lipopolysaccharide-assembly, LptC-related YPSIP31758_RS03565 PF00571 CBS domain YPSIP31758_RS03565 PF01380 SIS domain YPSIP31758_RS03570 PF01699 Sodium/calcium exchanger protein YPSIP31758_RS03575 PF00005 ABC transporter YPSIP31758_RS03580 PF02405 Permease MlaE YPSIP31758_RS03585 PF02470 MlaD protein YPSIP31758_RS03590 PF05494 MlaC protein YPSIP31758_RS03595 PF13466 STAS domain YPSIP31758_RS03600 PF01722 BolA-like protein YPSIP31758_RS03605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YPSIP31758_RS03610 PF13180 PDZ domain YPSIP31758_RS03615 PF00595 PDZ domain YPSIP31758_RS03615 PF13180 PDZ domain YPSIP31758_RS03620 PF06295 Protein of unknown function (DUF1043) YPSIP31758_RS03625 PF03969 AFG1-like ATPase YPSIP31758_RS03630 PF00572 Ribosomal protein L13 YPSIP31758_RS03635 PF00380 Ribosomal protein S9/S16 YPSIP31758_RS03645 PF00043 Glutathione S-transferase, C-terminal domain YPSIP31758_RS03645 PF02798 Glutathione S-transferase, N-terminal domain YPSIP31758_RS03650 PF04386 Stringent starvation protein B YPSIP31758_RS03660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YPSIP31758_RS03660 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS03665 PF01645 Conserved region in glutamate synthase YPSIP31758_RS03665 PF01493 GXGXG motif YPSIP31758_RS03665 PF00310 Glutamine amidotransferases class-II YPSIP31758_RS03665 PF04898 Glutamate synthase central domain YPSIP31758_RS03670 PF16199 Radical_SAM C-terminal domain YPSIP31758_RS03670 PF04055 Radical SAM superfamily YPSIP31758_RS03680 PF18415 Histidine kinase receptor ArcB trans-membrane domain YPSIP31758_RS03680 PF01627 Hpt domain YPSIP31758_RS03680 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS03680 PF00072 Response regulator receiver domain YPSIP31758_RS03680 PF00989 PAS fold YPSIP31758_RS03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS03695 PF00912 Transglycosylase YPSIP31758_RS03700 PF04972 BON domain YPSIP31758_RS03705 PF13580 SIS domain YPSIP31758_RS03710 PF02021 Uncharacterised protein family UPF0102 YPSIP31758_RS03715 PF04348 LppC putative lipoprotein YPSIP31758_RS03720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YPSIP31758_RS03725 PF17954 Quercetinase C-terminal cupin domain YPSIP31758_RS03725 PF02678 Pirin YPSIP31758_RS03730 PF03466 LysR substrate binding domain YPSIP31758_RS03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS03735 PF13409 Glutathione S-transferase, N-terminal domain YPSIP31758_RS03740 PF07681 DoxX YPSIP31758_RS03750 PF07332 Putative Actinobacterial Holin-X, holin superfamily III YPSIP31758_RS03755 PF05957 Bacterial protein of unknown function (DUF883) YPSIP31758_RS03770 PF13721 SecD export protein N-terminal TM region YPSIP31758_RS03775 PF09335 SNARE associated Golgi protein YPSIP31758_RS03785 PF07729 FCD domain YPSIP31758_RS03785 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS03790 PF07690 Major Facilitator Superfamily YPSIP31758_RS03800 PF02614 Glucuronate isomerase YPSIP31758_RS03805 PF01232 Mannitol dehydrogenase Rossmann domain YPSIP31758_RS03805 PF08125 Mannitol dehydrogenase C-terminal domain YPSIP31758_RS03810 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus YPSIP31758_RS03810 PF08666 SAF domain YPSIP31758_RS03815 PF10688 Bacterial inner membrane protein YPSIP31758_RS03820 PF00375 Sodium:dicarboxylate symporter family YPSIP31758_RS03825 PF01797 Transposase IS200 like YPSIP31758_RS03830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPSIP31758_RS03835 PF01863 Protein of unknown function DUF45 YPSIP31758_RS03840 PF03797 Autotransporter beta-domain YPSIP31758_RS03845 PF05175 Methyltransferase small domain YPSIP31758_RS03850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YPSIP31758_RS03850 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS03855 PF03729 Short repeat of unknown function (DUF308) YPSIP31758_RS03875 PF00092 von Willebrand factor type A domain YPSIP31758_RS03885 PF02342 TerD domain YPSIP31758_RS03890 PF00092 von Willebrand factor type A domain YPSIP31758_RS03895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPSIP31758_RS03895 PF17287 POTRA domain YPSIP31758_RS03895 PF08479 POTRA domain, ShlB-type YPSIP31758_RS03920 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS03920 PF13332 Hemagglutinin repeat YPSIP31758_RS03920 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS03920 PF05860 haemagglutination activity domain YPSIP31758_RS03940 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS03940 PF13332 Hemagglutinin repeat YPSIP31758_RS03945 PF07262 CDI immunity protein YPSIP31758_RS03950 PF05860 haemagglutination activity domain YPSIP31758_RS03950 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS03950 PF13332 Hemagglutinin repeat YPSIP31758_RS03950 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS03960 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS03960 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS03960 PF13332 Hemagglutinin repeat YPSIP31758_RS03960 PF05860 haemagglutination activity domain YPSIP31758_RS03980 PF00005 ABC transporter YPSIP31758_RS03980 PF17912 MalK OB fold domain YPSIP31758_RS03980 PF03459 TOBE domain YPSIP31758_RS03985 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain YPSIP31758_RS03990 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS03995 PF01547 Bacterial extracellular solute-binding protein YPSIP31758_RS04000 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS04005 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS04015 PF01915 Glycosyl hydrolase family 3 C-terminal domain YPSIP31758_RS04015 PF14310 Fibronectin type III-like domain YPSIP31758_RS04015 PF00933 Glycosyl hydrolase family 3 N terminal domain YPSIP31758_RS04025 PF04632 Fusaric acid resistance protein family YPSIP31758_RS04030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS04030 PF00529 HlyD membrane-fusion protein of T1SS YPSIP31758_RS04050 PF00155 Aminotransferase class I and II YPSIP31758_RS04070 PF01042 Endoribonuclease L-PSP YPSIP31758_RS04090 PF03466 LysR substrate binding domain YPSIP31758_RS04090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS04110 PF05638 Type VI secretion system effector, Hcp YPSIP31758_RS04135 PF04545 Sigma-70, region 4 YPSIP31758_RS04135 PF04539 Sigma-70 region 3 YPSIP31758_RS04135 PF00140 Sigma-70 factor, region 1.2 YPSIP31758_RS04135 PF04546 Sigma-70, non-essential region YPSIP31758_RS04135 PF04542 Sigma-70 region 2 YPSIP31758_RS04135 PF03979 Sigma-70 factor, region 1.1 YPSIP31758_RS04140 PF10410 DnaB-helicase binding domain of primase YPSIP31758_RS04140 PF01807 CHC2 zinc finger YPSIP31758_RS04140 PF08275 DNA primase catalytic core, N-terminal domain YPSIP31758_RS04140 PF08278 DNA primase DnaG DnaB-binding YPSIP31758_RS04145 PF01165 Ribosomal protein S21 YPSIP31758_RS04150 PF00814 Glycoprotease family YPSIP31758_RS04155 PF02660 Glycerol-3-phosphate acyltransferase YPSIP31758_RS04160 PF02152 Dihydroneopterin aldolase YPSIP31758_RS04165 PF02673 Bacitracin resistance protein BacA YPSIP31758_RS04170 PF01743 Poly A polymerase head domain YPSIP31758_RS04170 PF12627 Probable RNA and SrmB- binding site of polymerase A YPSIP31758_RS04170 PF01966 HD domain YPSIP31758_RS04175 PF08239 Bacterial SH3 domain YPSIP31758_RS04180 PF01928 CYTH domain YPSIP31758_RS04185 PF08335 GlnD PII-uridylyltransferase YPSIP31758_RS04185 PF03710 Glutamate-ammonia ligase adenylyltransferase YPSIP31758_RS04190 PF01467 Cytidylyltransferase-like YPSIP31758_RS04190 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS04195 PF13520 Amino acid permease YPSIP31758_RS04200 PF04380 Membrane fusogenic activity YPSIP31758_RS04210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YPSIP31758_RS04215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YPSIP31758_RS04220 PF03738 Glutathionylspermidine synthase preATP-grasp YPSIP31758_RS04225 PF06693 Protein of unknown function (DUF1190) YPSIP31758_RS04235 PF02321 Outer membrane efflux protein YPSIP31758_RS04240 PF00293 NUDIX domain YPSIP31758_RS04245 PF06853 Protein of unknown function (DUF1249) YPSIP31758_RS04250 PF00149 Calcineurin-like phosphoesterase YPSIP31758_RS04255 PF05728 Uncharacterised protein family (UPF0227) YPSIP31758_RS04260 PF00204 DNA gyrase B YPSIP31758_RS04260 PF01751 Toprim domain YPSIP31758_RS04260 PF00986 DNA gyrase B subunit, carboxyl terminus YPSIP31758_RS04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS04265 PF03466 LysR substrate binding domain YPSIP31758_RS04265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS04270 PF02525 Flavodoxin-like fold YPSIP31758_RS04280 PF00521 DNA gyrase/topoisomerase IV, subunit A YPSIP31758_RS04280 PF03989 DNA gyrase C-terminal domain, beta-propeller YPSIP31758_RS04285 PF01553 Acyltransferase YPSIP31758_RS04290 PF07731 Multicopper oxidase YPSIP31758_RS04290 PF07732 Multicopper oxidase YPSIP31758_RS04300 PF11842 Domain of unknown function (DUF3362) YPSIP31758_RS04300 PF08497 Radical SAM N-terminal YPSIP31758_RS04300 PF04055 Radical SAM superfamily YPSIP31758_RS04305 PF00248 Aldo/keto reductase family YPSIP31758_RS04315 PF00465 Iron-containing alcohol dehydrogenase YPSIP31758_RS04320 PF12833 Helix-turn-helix domain YPSIP31758_RS04320 PF06719 AraC-type transcriptional regulator N-terminus YPSIP31758_RS04325 PF09335 SNARE associated Golgi protein YPSIP31758_RS04330 PF01053 Cys/Met metabolism PLP-dependent enzyme YPSIP31758_RS04335 PF01618 MotA/TolQ/ExbB proton channel family YPSIP31758_RS04340 PF02472 Biopolymer transport protein ExbD/TolR YPSIP31758_RS04375 PF00437 Type II/IV secretion system protein YPSIP31758_RS04390 PF13629 Pilus formation protein N terminal region YPSIP31758_RS04390 PF04972 BON domain YPSIP31758_RS04390 PF00263 Bacterial type II and III secretion system protein YPSIP31758_RS04425 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YPSIP31758_RS04425 PF18416 N-acetylglucosamine binding protein domain 2 YPSIP31758_RS04430 PF00704 Glycosyl hydrolases family 18 YPSIP31758_RS04435 PF00419 Fimbrial protein YPSIP31758_RS04440 PF00577 Outer membrane usher protein YPSIP31758_RS04440 PF13954 PapC N-terminal domain YPSIP31758_RS04440 PF13953 PapC C-terminal domain YPSIP31758_RS04445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS04445 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS04450 PF00419 Fimbrial protein YPSIP31758_RS04450 PF09222 Fimbrial adhesin F17-AG, lectin domain YPSIP31758_RS04455 PF01497 Periplasmic binding protein YPSIP31758_RS04470 PF00771 FHIPEP family YPSIP31758_RS04475 PF01312 FlhB HrpN YscU SpaS Family YPSIP31758_RS04480 PF01311 Bacterial export proteins, family 1 YPSIP31758_RS04485 PF01313 Bacterial export proteins, family 3 YPSIP31758_RS04490 PF00813 FliP family YPSIP31758_RS04495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YPSIP31758_RS04505 PF02954 Bacterial regulatory protein, Fis family YPSIP31758_RS04505 PF00158 Sigma-54 interaction domain YPSIP31758_RS04505 PF00072 Response regulator receiver domain YPSIP31758_RS04510 PF02049 Flagellar hook-basal body complex protein FliE YPSIP31758_RS04515 PF01514 Secretory protein of YscJ/FliF family YPSIP31758_RS04515 PF08345 Flagellar M-ring protein C-terminal YPSIP31758_RS04530 PF18269 T3SS EscN ATPase C-terminal domain YPSIP31758_RS04530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPSIP31758_RS04550 PF13144 Chaperone for flagella basal body P-ring formation YPSIP31758_RS04555 PF00460 Flagella basal body rod protein YPSIP31758_RS04560 PF00460 Flagella basal body rod protein YPSIP31758_RS04560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS04565 PF13861 FlgD Tudor-like domain YPSIP31758_RS04565 PF13860 FlgD Ig-like domain YPSIP31758_RS04565 PF03963 Flagellar hook capping protein - N-terminal region YPSIP31758_RS04570 PF07559 Flagellar basal body protein FlaE YPSIP31758_RS04570 PF00460 Flagella basal body rod protein YPSIP31758_RS04570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS04575 PF00460 Flagella basal body rod protein YPSIP31758_RS04575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS04580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS04580 PF00460 Flagella basal body rod protein YPSIP31758_RS04585 PF02107 Flagellar L-ring protein YPSIP31758_RS04590 PF02119 Flagellar P-ring protein YPSIP31758_RS04600 PF00460 Flagella basal body rod protein YPSIP31758_RS04600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS04620 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS04620 PF18500 CadC C-terminal domain 1 YPSIP31758_RS04625 PF00700 Bacterial flagellin C-terminal helical region YPSIP31758_RS04625 PF07196 Flagellin hook IN motif YPSIP31758_RS04625 PF00669 Bacterial flagellin N-terminal helical region YPSIP31758_RS04630 PF00669 Bacterial flagellin N-terminal helical region YPSIP31758_RS04630 PF07196 Flagellin hook IN motif YPSIP31758_RS04630 PF00700 Bacterial flagellin C-terminal helical region YPSIP31758_RS04635 PF07195 Flagellar hook-associated protein 2 C-terminus YPSIP31758_RS04635 PF07196 Flagellin hook IN motif YPSIP31758_RS04635 PF02465 Flagellar hook-associated protein 2 N-terminus YPSIP31758_RS04660 PF04542 Sigma-70 region 2 YPSIP31758_RS04660 PF04545 Sigma-70, region 4 YPSIP31758_RS04665 PF01618 MotA/TolQ/ExbB proton channel family YPSIP31758_RS04670 PF00691 OmpA family YPSIP31758_RS04670 PF13677 Membrane MotB of proton-channel complex MotA/MotB YPSIP31758_RS04695 PF05433 Glycine zipper 2TM domain YPSIP31758_RS04705 PF03707 Bacterial signalling protein N terminal repeat YPSIP31758_RS04705 PF13188 PAS domain YPSIP31758_RS04705 PF00563 EAL domain YPSIP31758_RS04705 PF00990 Diguanylate cyclase, GGDEF domain YPSIP31758_RS04710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS04710 PF00529 HlyD membrane-fusion protein of T1SS YPSIP31758_RS04715 PF00873 AcrB/AcrD/AcrF family YPSIP31758_RS04730 PF07906 ShET2 enterotoxin, N-terminal region YPSIP31758_RS04745 PF14496 C-terminal novel E3 ligase, LRR-interacting YPSIP31758_RS04745 PF14496 C-terminal novel E3 ligase, LRR-interacting YPSIP31758_RS04745 PF12468 Type III secretion system leucine rich repeat protein YPSIP31758_RS04745 PF12468 Type III secretion system leucine rich repeat protein YPSIP31758_RS04750 PF12468 Type III secretion system leucine rich repeat protein YPSIP31758_RS04750 PF14496 C-terminal novel E3 ligase, LRR-interacting YPSIP31758_RS04760 PF03806 AbgT putative transporter family YPSIP31758_RS04765 PF07687 Peptidase dimerisation domain YPSIP31758_RS04765 PF01546 Peptidase family M20/M25/M40 YPSIP31758_RS04770 PF00593 TonB dependent receptor YPSIP31758_RS04770 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS04780 PF00550 Phosphopantetheine attachment site YPSIP31758_RS04780 PF00668 Condensation domain YPSIP31758_RS04780 PF08242 Methyltransferase domain YPSIP31758_RS04780 PF00501 AMP-binding enzyme YPSIP31758_RS04785 PF13193 AMP-binding enzyme C-terminal domain YPSIP31758_RS04785 PF00668 Condensation domain YPSIP31758_RS04785 PF00501 AMP-binding enzyme YPSIP31758_RS04790 PF00550 Phosphopantetheine attachment site YPSIP31758_RS04790 PF00668 Condensation domain YPSIP31758_RS04790 PF00501 AMP-binding enzyme YPSIP31758_RS04790 PF08242 Methyltransferase domain YPSIP31758_RS04805 PF00975 Thioesterase domain YPSIP31758_RS04815 PF00005 ABC transporter YPSIP31758_RS04815 PF00664 ABC transporter transmembrane region YPSIP31758_RS04815 PF04954 Siderophore-interacting protein YPSIP31758_RS04815 PF08021 Siderophore-interacting FAD-binding domain YPSIP31758_RS04820 PF00664 ABC transporter transmembrane region YPSIP31758_RS04820 PF00005 ABC transporter YPSIP31758_RS04835 PF02447 GntP family permease YPSIP31758_RS04840 PF12951 Passenger-associated-transport-repeat YPSIP31758_RS04845 PF12951 Passenger-associated-transport-repeat YPSIP31758_RS04850 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS04860 PF03527 RHS protein YPSIP31758_RS04860 PF05593 RHS Repeat YPSIP31758_RS04870 PF03527 RHS protein YPSIP31758_RS04870 PF05593 RHS Repeat YPSIP31758_RS04900 PF00939 Sodium:sulfate symporter transmembrane region YPSIP31758_RS04905 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS04920 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS04920 PF00593 TonB dependent receptor YPSIP31758_RS04925 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YPSIP31758_RS04930 PF06276 Ferric iron reductase FhuF-like transporter YPSIP31758_RS04930 PF04183 IucA / IucC family YPSIP31758_RS04940 PF06276 Ferric iron reductase FhuF-like transporter YPSIP31758_RS04940 PF04183 IucA / IucC family YPSIP31758_RS04960 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS04960 PF03472 Autoinducer binding domain YPSIP31758_RS04965 PF00765 Autoinducer synthase YPSIP31758_RS04970 PF02517 CPBP intramembrane metalloprotease YPSIP31758_RS04980 PF12759 InsA C-terminal domain YPSIP31758_RS04980 PF03811 InsA N-terminal domain YPSIP31758_RS05000 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPSIP31758_RS05015 PF05736 OprF membrane domain YPSIP31758_RS05015 PF00691 OmpA family YPSIP31758_RS05025 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS05025 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS05025 PF17871 AAA lid domain YPSIP31758_RS05025 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS05030 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) YPSIP31758_RS05030 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS05030 PF13296 Putative type VI secretion system Rhs element Vgr YPSIP31758_RS05050 PF12759 InsA C-terminal domain YPSIP31758_RS05050 PF03811 InsA N-terminal domain YPSIP31758_RS05080 PF12759 InsA C-terminal domain YPSIP31758_RS05080 PF03811 InsA N-terminal domain YPSIP31758_RS05085 PF03400 IS1 transposase YPSIP31758_RS05095 PF00589 Phage integrase family YPSIP31758_RS05095 PF02899 Phage integrase, N-terminal SAM-like domain YPSIP31758_RS05115 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A YPSIP31758_RS05120 PF06755 CbtA_toxin of type IV toxin-antitoxin system YPSIP31758_RS05130 PF04002 RadC-like JAB domain YPSIP31758_RS05135 PF03230 Antirestriction protein YPSIP31758_RS05145 PF06067 Domain of unknown function (DUF932) YPSIP31758_RS05165 PF08220 DeoR-like helix-turn-helix domain YPSIP31758_RS05165 PF13280 WYL domain YPSIP31758_RS05170 PF01926 50S ribosome-binding GTPase YPSIP31758_RS05210 PF13592 Winged helix-turn helix YPSIP31758_RS05210 PF13358 DDE superfamily endonuclease YPSIP31758_RS05250 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPSIP31758_RS05265 PF00691 OmpA family YPSIP31758_RS05265 PF13488 Glycine zipper YPSIP31758_RS05280 PF13296 Putative type VI secretion system Rhs element Vgr YPSIP31758_RS05280 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS05280 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) YPSIP31758_RS05295 PF13296 Putative type VI secretion system Rhs element Vgr YPSIP31758_RS05295 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS05295 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) YPSIP31758_RS05380 PF13195 Protein of unknown function (DUF4011) YPSIP31758_RS05380 PF13087 AAA domain YPSIP31758_RS05380 PF13195 Protein of unknown function (DUF4011) YPSIP31758_RS05380 PF13086 AAA domain YPSIP31758_RS05380 PF13086 AAA domain YPSIP31758_RS05380 PF13087 AAA domain YPSIP31758_RS05385 PF00589 Phage integrase family YPSIP31758_RS05385 PF13356 Arm DNA-binding domain YPSIP31758_RS05395 PF01276 Orn/Lys/Arg decarboxylase, major domain YPSIP31758_RS05395 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YPSIP31758_RS05395 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YPSIP31758_RS05400 PF13407 Periplasmic binding protein domain YPSIP31758_RS05405 PF00005 ABC transporter YPSIP31758_RS05410 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS05415 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS05425 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain YPSIP31758_RS05425 PF01464 Transglycosylase SLT domain YPSIP31758_RS05430 PF04362 Bacterial Fe(2+) trafficking YPSIP31758_RS05435 PF14815 NUDIX domain YPSIP31758_RS05435 PF00730 HhH-GPD superfamily base excision DNA repair protein YPSIP31758_RS05435 PF00633 Helix-hairpin-helix motif YPSIP31758_RS05435 PF10576 Iron-sulfur binding domain of endonuclease III YPSIP31758_RS05440 PF02390 Putative methyltransferase YPSIP31758_RS05445 PF04320 Protein with unknown function (DUF469) YPSIP31758_RS05450 PF04960 Glutaminase YPSIP31758_RS05455 PF11101 Protein of unknown function (DUF2884) YPSIP31758_RS05460 PF12146 Serine aminopeptidase, S33 YPSIP31758_RS05460 PF16671 Actin cross-linking domain YPSIP31758_RS05460 PF11713 Peptidase C80 family YPSIP31758_RS05460 PF11647 Membrane Localization Domain YPSIP31758_RS05460 PF07634 RtxA repeat YPSIP31758_RS05465 PF04055 Radical SAM superfamily YPSIP31758_RS05465 PF06969 HemN C-terminal domain YPSIP31758_RS05470 PF01725 Ham1 family YPSIP31758_RS05475 PF02594 Uncharacterised ACR, YggU family COG1872 YPSIP31758_RS05480 PF02325 YGGT family YPSIP31758_RS05485 PF14748 Pyrroline-5-carboxylate reductase dimerisation YPSIP31758_RS05485 PF03807 NADP oxidoreductase coenzyme F420-dependent YPSIP31758_RS05490 PF01168 Alanine racemase, N-terminal domain YPSIP31758_RS05495 PF00437 Type II/IV secretion system protein YPSIP31758_RS05500 PF04371 Porphyromonas-type peptidyl-arginine deiminase YPSIP31758_RS05505 PF00795 Carbon-nitrogen hydrolase YPSIP31758_RS05510 PF03652 Holliday junction resolvase YPSIP31758_RS05515 PF02622 Uncharacterized ACR, COG1678 YPSIP31758_RS05520 PF02951 Prokaryotic glutathione synthetase, N-terminal domain YPSIP31758_RS05520 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain YPSIP31758_RS05525 PF04452 RNA methyltransferase YPSIP31758_RS05530 PF04231 Endonuclease I YPSIP31758_RS05535 PF17283 SprT-like zinc ribbon domain YPSIP31758_RS05535 PF10263 SprT-like family YPSIP31758_RS05540 PF02773 S-adenosylmethionine synthetase, C-terminal domain YPSIP31758_RS05540 PF02772 S-adenosylmethionine synthetase, central domain YPSIP31758_RS05540 PF00438 S-adenosylmethionine synthetase, N-terminal domain YPSIP31758_RS05545 PF17810 Arginine decarboxylase helical bundle domain YPSIP31758_RS05545 PF17944 Arginine decarboxylase C-terminal helical extension YPSIP31758_RS05545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YPSIP31758_RS05555 PF01435 Peptidase family M48 YPSIP31758_RS05560 PF02780 Transketolase, C-terminal domain YPSIP31758_RS05560 PF02779 Transketolase, pyrimidine binding domain YPSIP31758_RS05560 PF00456 Transketolase, thiamine diphosphate binding domain YPSIP31758_RS05565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YPSIP31758_RS05565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPSIP31758_RS05570 PF00162 Phosphoglycerate kinase YPSIP31758_RS05575 PF01116 Fructose-bisphosphate aldolase class-II YPSIP31758_RS05585 PF00924 Mechanosensitive ion channel YPSIP31758_RS05585 PF05552 Conserved TM helix YPSIP31758_RS05590 PF01810 LysE type translocator YPSIP31758_RS05595 PF04402 Protein of unknown function (DUF541) YPSIP31758_RS05600 PF03466 LysR substrate binding domain YPSIP31758_RS05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS05605 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YPSIP31758_RS05610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPSIP31758_RS05610 PF01842 ACT domain YPSIP31758_RS05610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPSIP31758_RS05615 PF01812 5-formyltetrahydrofolate cyclo-ligase family YPSIP31758_RS05620 PF05164 Cell division protein ZapA YPSIP31758_RS05625 PF03695 Uncharacterised protein family (UPF0149) YPSIP31758_RS05630 PF05195 Aminopeptidase P, N-terminal domain YPSIP31758_RS05630 PF00557 Metallopeptidase family M24 YPSIP31758_RS05635 PF01494 FAD binding domain YPSIP31758_RS05640 PF01494 FAD binding domain YPSIP31758_RS05645 PF08669 Glycine cleavage T-protein C-terminal barrel domain YPSIP31758_RS05645 PF01571 Aminomethyltransferase folate-binding domain YPSIP31758_RS05650 PF01597 Glycine cleavage H-protein YPSIP31758_RS05655 PF02347 Glycine cleavage system P-protein YPSIP31758_RS05670 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS05670 PF03895 YadA-like membrane anchor domain YPSIP31758_RS05670 PF05662 Coiled stalk of trimeric autotransporter adhesin YPSIP31758_RS05670 PF05658 Head domain of trimeric autotransporter adhesin YPSIP31758_RS05680 PF03006 Haemolysin-III related YPSIP31758_RS05690 PF01571 Aminomethyltransferase folate-binding domain YPSIP31758_RS05695 PF03937 Flavinator of succinate dehydrogenase YPSIP31758_RS05700 PF07254 Membrane-bound toxin component of toxin-antitoxin system YPSIP31758_RS05705 PF00072 Response regulator receiver domain YPSIP31758_RS05705 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS05710 PF00672 HAMP domain YPSIP31758_RS05710 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS05710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS05715 PF06123 Inner membrane protein CreD YPSIP31758_RS05720 PF00258 Flavodoxin YPSIP31758_RS05725 PF02899 Phage integrase, N-terminal SAM-like domain YPSIP31758_RS05725 PF00589 Phage integrase family YPSIP31758_RS05730 PF10411 Disulfide bond isomerase protein N-terminus YPSIP31758_RS05730 PF13098 Thioredoxin-like domain YPSIP31758_RS05735 PF01368 DHH family YPSIP31758_RS05735 PF17768 RecJ OB domain YPSIP31758_RS05735 PF02272 DHHA1 domain YPSIP31758_RS05740 PF03462 PCRF domain YPSIP31758_RS05740 PF00472 RF-1 domain YPSIP31758_RS05745 PF01336 OB-fold nucleic acid binding domain YPSIP31758_RS05745 PF00152 tRNA synthetases class II (D, K and N) YPSIP31758_RS05755 PF00589 Phage integrase family YPSIP31758_RS05755 PF13356 Arm DNA-binding domain YPSIP31758_RS05755 PF14659 Phage integrase, N-terminal SAM-like domain YPSIP31758_RS05780 PF15723 Motility quorum-sensing regulator, toxin of MqsA YPSIP31758_RS05785 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA YPSIP31758_RS05880 PF03551 Transcriptional regulator PadR-like family YPSIP31758_RS05885 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YPSIP31758_RS05895 PF13407 Periplasmic binding protein domain YPSIP31758_RS05900 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS05905 PF00005 ABC transporter YPSIP31758_RS05910 PF17912 MalK OB fold domain YPSIP31758_RS05910 PF00005 ABC transporter YPSIP31758_RS05915 PF13416 Bacterial extracellular solute-binding protein YPSIP31758_RS05920 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS05925 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS05930 PF07745 Glycosyl hydrolase family 53 YPSIP31758_RS05935 PF08532 Beta-galactosidase trimerisation domain YPSIP31758_RS05935 PF02449 Beta-galactosidase YPSIP31758_RS05935 PF08533 Beta-galactosidase C-terminal domain YPSIP31758_RS05940 PF02378 Phosphotransferase system, EIIC YPSIP31758_RS05940 PF00367 phosphotransferase system, EIIB YPSIP31758_RS05945 PF02264 LamB porin YPSIP31758_RS05950 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS05955 PF13802 Galactose mutarotase-like YPSIP31758_RS05955 PF17137 Domain of unknown function (DUF5110) YPSIP31758_RS05955 PF16338 Domain of unknown function (DUF4968) YPSIP31758_RS05955 PF01055 Glycosyl hydrolases family 31 YPSIP31758_RS05960 PF07690 Major Facilitator Superfamily YPSIP31758_RS05965 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS05980 PF01116 Fructose-bisphosphate aldolase class-II YPSIP31758_RS05990 PF00884 Sulfatase YPSIP31758_RS05995 PF13186 Iron-sulfur cluster-binding domain YPSIP31758_RS05995 PF04055 Radical SAM superfamily YPSIP31758_RS06000 PF07470 Glycosyl Hydrolase Family 88 YPSIP31758_RS06010 PF01979 Amidohydrolase family YPSIP31758_RS06015 PF03610 PTS system fructose IIA component YPSIP31758_RS06020 PF03613 PTS system mannose/fructose/sorbose family IID component YPSIP31758_RS06025 PF03609 PTS system sorbose-specific iic component YPSIP31758_RS06030 PF03830 PTS system sorbose subfamily IIB component YPSIP31758_RS06035 PF01380 SIS domain YPSIP31758_RS06040 PF08013 Tagatose 6 phosphate kinase YPSIP31758_RS06045 PF00455 DeoR C terminal sensor domain YPSIP31758_RS06045 PF08220 DeoR-like helix-turn-helix domain YPSIP31758_RS06050 PF00884 Sulfatase YPSIP31758_RS06055 PF09092 Lyase, N terminal YPSIP31758_RS06055 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain YPSIP31758_RS06055 PF02278 Polysaccharide lyase family 8, super-sandwich domain YPSIP31758_RS06055 PF09093 Lyase, catalytic YPSIP31758_RS06080 PF00484 Carbonic anhydrase YPSIP31758_RS06095 PF03958 Bacterial type II/III secretion system short domain YPSIP31758_RS06095 PF00263 Bacterial type II and III secretion system protein YPSIP31758_RS06100 PF00437 Type II/IV secretion system protein YPSIP31758_RS06105 PF00482 Type II secretion system (T2SS), protein F YPSIP31758_RS06110 PF07963 Prokaryotic N-terminal methylation motif YPSIP31758_RS06110 PF08334 Type II secretion system (T2SS), protein G YPSIP31758_RS06125 PF07963 Prokaryotic N-terminal methylation motif YPSIP31758_RS06125 PF11612 Type II secretion system (T2SS), protein J YPSIP31758_RS06145 PF01478 Type IV leader peptidase family YPSIP31758_RS06145 PF06750 Bacterial Peptidase A24 N-terminal domain YPSIP31758_RS06165 PF00672 HAMP domain YPSIP31758_RS06165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS06165 PF02203 Tar ligand binding domain homologue YPSIP31758_RS06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS06180 PF03466 LysR substrate binding domain YPSIP31758_RS06185 PF07690 Major Facilitator Superfamily YPSIP31758_RS06190 PF03466 LysR substrate binding domain YPSIP31758_RS06190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS06195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YPSIP31758_RS06195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YPSIP31758_RS06200 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS06205 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS06205 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS06210 PF13193 AMP-binding enzyme C-terminal domain YPSIP31758_RS06210 PF00501 AMP-binding enzyme YPSIP31758_RS06210 PF01553 Acyltransferase YPSIP31758_RS06215 PF07690 Major Facilitator Superfamily YPSIP31758_RS06230 PF00248 Aldo/keto reductase family YPSIP31758_RS06235 PF02976 DNA mismatch repair enzyme MutH YPSIP31758_RS06250 PF00293 NUDIX domain YPSIP31758_RS06255 PF05524 PEP-utilising enzyme, N-terminal YPSIP31758_RS06255 PF01590 GAF domain YPSIP31758_RS06255 PF02896 PEP-utilising enzyme, TIM barrel domain YPSIP31758_RS06255 PF00391 PEP-utilising enzyme, mobile domain YPSIP31758_RS06260 PF01790 Prolipoprotein diacylglyceryl transferase YPSIP31758_RS06265 PF00303 Thymidylate synthase YPSIP31758_RS06295 PF17946 RecC C-terminal domain YPSIP31758_RS06300 PF00675 Insulinase (Peptidase family M16) YPSIP31758_RS06300 PF05193 Peptidase M16 inactive domain YPSIP31758_RS06300 PF16187 Middle or third domain of peptidase_M16 YPSIP31758_RS06305 PF00580 UvrD/REP helicase N-terminal domain YPSIP31758_RS06305 PF13361 UvrD-like helicase C-terminal domain YPSIP31758_RS06305 PF12705 PD-(D/E)XK nuclease superfamily YPSIP31758_RS06310 PF13538 UvrD-like helicase C-terminal domain YPSIP31758_RS06315 PF00696 Amino acid kinase family YPSIP31758_RS06315 PF00583 Acetyltransferase (GNAT) family YPSIP31758_RS06320 PF11741 AMIN domain YPSIP31758_RS06320 PF01520 N-acetylmuramoyl-L-alanine amidase YPSIP31758_RS06340 PF06725 3D domain YPSIP31758_RS06340 PF03562 MltA specific insert domain YPSIP31758_RS06345 PF00899 ThiF family YPSIP31758_RS06350 PF02657 Fe-S metabolism associated domain YPSIP31758_RS06355 PF00266 Aminotransferase class-V YPSIP31758_RS06360 PF03466 LysR substrate binding domain YPSIP31758_RS06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS06365 PF04241 Protein of unknown function (DUF423) YPSIP31758_RS06370 PF18125 RlmM ferredoxin-like domain YPSIP31758_RS06370 PF01728 FtsJ-like methyltransferase YPSIP31758_RS06375 PF01367 5'-3' exonuclease, C-terminal SAM fold YPSIP31758_RS06375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YPSIP31758_RS06380 PF11892 Domain of unknown function (DUF3412) YPSIP31758_RS06380 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases YPSIP31758_RS06380 PF03641 Possible lysine decarboxylase YPSIP31758_RS06385 PF14489 QueF-like protein YPSIP31758_RS06385 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term YPSIP31758_RS06390 PF07348 Syd protein (SUKH-2) YPSIP31758_RS06395 PF04287 tRNA pseudouridine synthase C YPSIP31758_RS06400 PF00849 RNA pseudouridylate synthase YPSIP31758_RS06405 PF00258 Flavodoxin YPSIP31758_RS06410 PF11944 Protein of unknown function (DUF3461) YPSIP31758_RS06415 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal YPSIP31758_RS06415 PF14602 Hexapeptide repeat of succinyl-transferase YPSIP31758_RS06415 PF00132 Bacterial transferase hexapeptide (six repeats) YPSIP31758_RS06420 PF01909 Nucleotidyltransferase domain YPSIP31758_RS06420 PF01966 HD domain YPSIP31758_RS06420 PF08335 GlnD PII-uridylyltransferase YPSIP31758_RS06420 PF01842 ACT domain YPSIP31758_RS06425 PF00557 Metallopeptidase family M24 YPSIP31758_RS06430 PF00318 Ribosomal protein S2 YPSIP31758_RS06435 PF00889 Elongation factor TS YPSIP31758_RS06440 PF00696 Amino acid kinase family YPSIP31758_RS06445 PF01765 Ribosome recycling factor YPSIP31758_RS06450 PF13288 DXP reductoisomerase C-terminal domain YPSIP31758_RS06450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPSIP31758_RS06450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YPSIP31758_RS06455 PF01255 Putative undecaprenyl diphosphate synthase YPSIP31758_RS06465 PF17820 PDZ domain YPSIP31758_RS06465 PF02163 Peptidase family M50 YPSIP31758_RS06470 PF07244 Surface antigen variable number repeat YPSIP31758_RS06470 PF01103 Surface antigen YPSIP31758_RS06475 PF03938 Outer membrane protein (OmpH-like) YPSIP31758_RS06480 PF00132 Bacterial transferase hexapeptide (six repeats) YPSIP31758_RS06480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YPSIP31758_RS06485 PF07977 FabA-like domain YPSIP31758_RS06490 PF00132 Bacterial transferase hexapeptide (six repeats) YPSIP31758_RS06490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YPSIP31758_RS06495 PF02684 Lipid-A-disaccharide synthetase YPSIP31758_RS06500 PF01351 Ribonuclease HII YPSIP31758_RS06505 PF02811 PHP domain YPSIP31758_RS06505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YPSIP31758_RS06505 PF07733 Bacterial DNA polymerase III alpha NTPase domain YPSIP31758_RS06505 PF01336 OB-fold nucleic acid binding domain YPSIP31758_RS06505 PF14579 Helix-hairpin-helix motif YPSIP31758_RS06510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YPSIP31758_RS06515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YPSIP31758_RS06520 PF01171 PP-loop family YPSIP31758_RS06520 PF11734 TilS substrate C-terminal domain YPSIP31758_RS06520 PF09179 TilS substrate binding domain YPSIP31758_RS06525 PF00034 Cytochrome c YPSIP31758_RS06530 PF07073 Modulator of Rho-dependent transcription termination (ROF) YPSIP31758_RS06535 PF06786 Uncharacterised protein family (UPF0253) YPSIP31758_RS06540 PF07152 YaeQ protein YPSIP31758_RS06545 PF00472 RF-1 domain YPSIP31758_RS06550 PF04170 NlpE N-terminal domain YPSIP31758_RS06550 PF17185 NlpE C-terminal OB domain YPSIP31758_RS06555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YPSIP31758_RS06555 PF04073 Aminoacyl-tRNA editing domain YPSIP31758_RS06555 PF03129 Anticodon binding domain YPSIP31758_RS06560 PF01980 tRNA-methyltransferase O YPSIP31758_RS06560 PF18389 TrmO C-terminal domain YPSIP31758_RS06565 PF16358 RcsF lipoprotein YPSIP31758_RS06570 PF03180 NLPA lipoprotein YPSIP31758_RS06575 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS06580 PF09383 NIL domain YPSIP31758_RS06580 PF00005 ABC transporter YPSIP31758_RS06620 PF00248 Aldo/keto reductase family YPSIP31758_RS06630 PF03372 Endonuclease/Exonuclease/phosphatase family YPSIP31758_RS06635 PF01476 LysM domain YPSIP31758_RS06635 PF01464 Transglycosylase SLT domain YPSIP31758_RS06640 PF16123 Hydroxyacylglutathione hydrolase C-terminus YPSIP31758_RS06640 PF00753 Metallo-beta-lactamase superfamily YPSIP31758_RS06645 PF08241 Methyltransferase domain YPSIP31758_RS06650 PF00075 RNase H YPSIP31758_RS06655 PF00929 Exonuclease YPSIP31758_RS06665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YPSIP31758_RS06675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YPSIP31758_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS06685 PF00005 ABC transporter YPSIP31758_RS06685 PF00571 CBS domain YPSIP31758_RS06690 PF00268 Ribonucleotide reductase, small chain YPSIP31758_RS06695 PF08343 Ribonucleotide reductase N-terminal YPSIP31758_RS06695 PF02867 Ribonucleotide reductase, barrel domain YPSIP31758_RS06695 PF00317 Ribonucleotide reductase, all-alpha domain YPSIP31758_RS06700 PF07972 NrdI Flavodoxin like YPSIP31758_RS06710 PF06392 Acid shock protein repeat YPSIP31758_RS06715 PF09400 Protein of unknown function (DUF2002) YPSIP31758_RS06720 PF06711 Protein of unknown function (DUF1198) YPSIP31758_RS06730 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS06735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS06740 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS06745 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS06745 PF12911 N-terminal TM domain of oligopeptide transport permease C YPSIP31758_RS06750 PF00005 ABC transporter YPSIP31758_RS06755 PF00005 ABC transporter YPSIP31758_RS06760 PF00547 Urease, gamma subunit YPSIP31758_RS06765 PF00699 Urease beta subunit YPSIP31758_RS06770 PF01979 Amidohydrolase family YPSIP31758_RS06770 PF00449 Urease alpha-subunit, N-terminal domain YPSIP31758_RS06775 PF02814 UreE urease accessory protein, N-terminal domain YPSIP31758_RS06775 PF05194 UreE urease accessory protein, C-terminal domain YPSIP31758_RS06780 PF01730 UreF YPSIP31758_RS06785 PF02492 CobW/HypB/UreG, nucleotide-binding domain YPSIP31758_RS06790 PF01774 UreD urease accessory protein YPSIP31758_RS06795 PF03253 Urea transporter YPSIP31758_RS06800 PF03824 High-affinity nickel-transport protein YPSIP31758_RS06805 PF06411 HdeA/HdeB family YPSIP31758_RS06815 PF02254 TrkA-N domain YPSIP31758_RS06815 PF07885 Ion channel YPSIP31758_RS06820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YPSIP31758_RS06825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YPSIP31758_RS06835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPSIP31758_RS06840 PF02378 Phosphotransferase system, EIIC YPSIP31758_RS06845 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YPSIP31758_RS06850 PF12833 Helix-turn-helix domain YPSIP31758_RS06850 PF07883 Cupin domain YPSIP31758_RS06855 PF04794 YdjC-like protein YPSIP31758_RS06870 PF17206 SeqA protein N-terminal domain YPSIP31758_RS06870 PF03925 SeqA protein C-terminal domain YPSIP31758_RS06875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPSIP31758_RS06875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPSIP31758_RS06875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPSIP31758_RS06875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPSIP31758_RS06895 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS06895 PF00072 Response regulator receiver domain YPSIP31758_RS06900 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS06900 PF13492 GAF domain YPSIP31758_RS06900 PF13493 Domain of unknown function (DUF4118) YPSIP31758_RS06900 PF02702 Osmosensitive K+ channel His kinase sensor domain YPSIP31758_RS06905 PF02669 K+-transporting ATPase, c chain YPSIP31758_RS06915 PF03814 Potassium-transporting ATPase A subunit YPSIP31758_RS06930 PF10725 Protein of unknown function (DUF2517) YPSIP31758_RS06935 PF08349 Protein of unknown function (DUF1722) YPSIP31758_RS06940 PF03441 FAD binding domain of DNA photolyase YPSIP31758_RS06940 PF00875 DNA photolyase YPSIP31758_RS06945 PF02112 cAMP phosphodiesterases class-II YPSIP31758_RS06950 PF01784 NIF3 (NGG1p interacting factor 3) YPSIP31758_RS06955 PF02682 Carboxyltransferase domain, subdomain C and D YPSIP31758_RS06960 PF02626 Carboxyltransferase domain, subdomain A and B YPSIP31758_RS06965 PF03746 LamB/YcsF family YPSIP31758_RS06980 PF01470 Pyroglutamyl peptidase YPSIP31758_RS06985 PF03167 Uracil DNA glycosylase superfamily YPSIP31758_RS06990 PF01228 Glycine radical YPSIP31758_RS07005 PF12796 Ankyrin repeats (3 copies) YPSIP31758_RS07010 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS07010 PF00270 DEAD/DEAH box helicase YPSIP31758_RS07015 PF05175 Methyltransferase small domain YPSIP31758_RS07020 PF02910 Fumarate reductase flavoprotein C-term YPSIP31758_RS07020 PF00890 FAD binding domain YPSIP31758_RS07025 PF04542 Sigma-70 region 2 YPSIP31758_RS07025 PF08281 Sigma-70, region 4 YPSIP31758_RS07030 PF03873 Anti sigma-E protein RseA, C-terminal domain YPSIP31758_RS07030 PF03872 Anti sigma-E protein RseA, N-terminal domain YPSIP31758_RS07035 PF17188 MucB/RseB C-terminal domain YPSIP31758_RS07035 PF03888 MucB/RseB N-terminal domain YPSIP31758_RS07050 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS07050 PF00679 Elongation factor G C-terminus YPSIP31758_RS07050 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS07050 PF06421 GTP-binding protein LepA C-terminus YPSIP31758_RS07055 PF10502 Signal peptidase, peptidase S26 YPSIP31758_RS07060 PF00035 Double-stranded RNA binding motif YPSIP31758_RS07060 PF14622 Ribonuclease-III-like YPSIP31758_RS07065 PF01926 50S ribosome-binding GTPase YPSIP31758_RS07065 PF07650 KH domain YPSIP31758_RS07070 PF11967 Recombination protein O N terminal YPSIP31758_RS07070 PF02565 Recombination protein O C terminal YPSIP31758_RS07075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YPSIP31758_RS07080 PF01648 4'-phosphopantetheinyl transferase superfamily YPSIP31758_RS07085 PF12838 4Fe-4S dicluster domain YPSIP31758_RS07090 PF01380 SIS domain YPSIP31758_RS07090 PF01418 Helix-turn-helix domain, rpiR family YPSIP31758_RS07095 PF01380 SIS domain YPSIP31758_RS07105 PF14437 MafB19-like deaminase YPSIP31758_RS07110 PF01464 Transglycosylase SLT domain YPSIP31758_RS07110 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS07115 PF02769 AIR synthase related protein, C-terminal domain YPSIP31758_RS07115 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal YPSIP31758_RS07115 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YPSIP31758_RS07130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS07130 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS07135 PF13942 YfhG lipoprotein YPSIP31758_RS07140 PF00072 Response regulator receiver domain YPSIP31758_RS07140 PF00158 Sigma-54 interaction domain YPSIP31758_RS07145 PF00795 Carbon-nitrogen hydrolase YPSIP31758_RS07145 PF02540 NAD synthase YPSIP31758_RS07150 PF00543 Nitrogen regulatory protein P-II YPSIP31758_RS07155 PF14502 Helix-turn-helix domain YPSIP31758_RS07155 PF14503 YhfZ C-terminal domain YPSIP31758_RS07160 PF00970 Oxidoreductase FAD-binding domain YPSIP31758_RS07160 PF00042 Globin YPSIP31758_RS07160 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS07165 PF00464 Serine hydroxymethyltransferase YPSIP31758_RS07175 PF13505 Outer membrane protein beta-barrel domain YPSIP31758_RS07180 PF12832 MFS_1 like family YPSIP31758_RS07185 PF00874 PRD domain YPSIP31758_RS07190 PF06226 Protein of unknown function (DUF1007) YPSIP31758_RS07195 PF03824 High-affinity nickel-transport protein YPSIP31758_RS07200 PF00459 Inositol monophosphatase family YPSIP31758_RS07205 PF00588 SpoU rRNA Methylase family YPSIP31758_RS07210 PF02082 Transcriptional regulator YPSIP31758_RS07215 PF00266 Aminotransferase class-V YPSIP31758_RS07220 PF01592 NifU-like N terminal domain YPSIP31758_RS07225 PF01521 Iron-sulphur cluster biosynthesis YPSIP31758_RS07230 PF07743 HSCB C-terminal oligomerisation domain YPSIP31758_RS07230 PF00226 DnaJ domain YPSIP31758_RS07235 PF00012 Hsp70 protein YPSIP31758_RS07240 PF00111 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS07245 PF04384 Iron-sulphur cluster assembly YPSIP31758_RS07250 PF12404 Peptidase YPSIP31758_RS07250 PF00883 Cytosol aminopeptidase family, catalytic domain YPSIP31758_RS07255 PF07179 SseB protein N-terminal domain YPSIP31758_RS07255 PF14581 SseB protein C-terminal domain YPSIP31758_RS07260 PF03797 Autotransporter beta-domain YPSIP31758_RS07260 PF16168 Adhesin of bacterial autotransporter system, probable stalk YPSIP31758_RS07260 PF03212 Pertactin YPSIP31758_RS07265 PF03212 Pertactin YPSIP31758_RS07265 PF03797 Autotransporter beta-domain YPSIP31758_RS07265 PF16168 Adhesin of bacterial autotransporter system, probable stalk YPSIP31758_RS07280 PF00334 Nucleoside diphosphate kinase YPSIP31758_RS07285 PF04055 Radical SAM superfamily YPSIP31758_RS07295 PF13464 Domain of unknown function (DUF4115) YPSIP31758_RS07300 PF04551 GcpE protein YPSIP31758_RS07305 PF13393 Histidyl-tRNA synthetase YPSIP31758_RS07305 PF03129 Anticodon binding domain YPSIP31758_RS07310 PF09976 Tetratricopeptide repeat-like domain YPSIP31758_RS07315 PF13360 PQQ-like domain YPSIP31758_RS07320 PF01926 50S ribosome-binding GTPase YPSIP31758_RS07320 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YPSIP31758_RS07330 PF07191 zinc-ribbons YPSIP31758_RS07335 PF02601 Exonuclease VII, large subunit YPSIP31758_RS07335 PF13742 OB-fold nucleic acid binding domain YPSIP31758_RS07340 PF00478 IMP dehydrogenase / GMP reductase domain YPSIP31758_RS07340 PF00571 CBS domain YPSIP31758_RS07350 PF02540 NAD synthase YPSIP31758_RS07350 PF00117 Glutamine amidotransferase class-I YPSIP31758_RS07350 PF00958 GMP synthase C terminal domain YPSIP31758_RS07355 PF05638 Type VI secretion system effector, Hcp YPSIP31758_RS07395 PF08543 Phosphomethylpyrimidine kinase YPSIP31758_RS07410 PF00781 Diacylglycerol kinase catalytic domain YPSIP31758_RS07415 PF16325 Peptidase family U32 C-terminal domain YPSIP31758_RS07415 PF01136 Peptidase family U32 YPSIP31758_RS07420 PF07411 Domain of unknown function (DUF1508) YPSIP31758_RS07425 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS07425 PF00072 Response regulator receiver domain YPSIP31758_RS07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS07430 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS07430 PF00672 HAMP domain YPSIP31758_RS07435 PF07690 Major Facilitator Superfamily YPSIP31758_RS07440 PF00873 AcrB/AcrD/AcrF family YPSIP31758_RS07445 PF00873 AcrB/AcrD/AcrF family YPSIP31758_RS07450 PF13533 Biotin-lipoyl like YPSIP31758_RS07455 PF00005 ABC transporter YPSIP31758_RS07455 PF08402 TOBE domain YPSIP31758_RS07460 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS07460 PF00155 Aminotransferase class I and II YPSIP31758_RS07465 PF00202 Aminotransferase class-III YPSIP31758_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS07480 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS07485 PF00012 Hsp70 protein YPSIP31758_RS07490 PF01769 Divalent cation transporter YPSIP31758_RS07490 PF00571 CBS domain YPSIP31758_RS07490 PF03448 MgtE intracellular N domain YPSIP31758_RS07500 PF02541 Ppx/GppA phosphatase family YPSIP31758_RS07505 PF13090 Polyphosphate kinase C-terminal domain 2 YPSIP31758_RS07505 PF02503 Polyphosphate kinase middle domain YPSIP31758_RS07505 PF17941 Polyphosphate kinase C-terminal domain 1 YPSIP31758_RS07505 PF13089 Polyphosphate kinase N-terminal domain YPSIP31758_RS07510 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS07520 PF00005 ABC transporter YPSIP31758_RS07530 PF13302 Acetyltransferase (GNAT) domain YPSIP31758_RS07535 PF00551 Formyl transferase YPSIP31758_RS07540 PF02769 AIR synthase related protein, C-terminal domain YPSIP31758_RS07540 PF00586 AIR synthase related protein, N-terminal domain YPSIP31758_RS07550 PF00860 Permease family YPSIP31758_RS07555 PF00308 Bacterial dnaA protein YPSIP31758_RS07560 PF03960 ArsC family YPSIP31758_RS07565 PF07720 Tetratricopeptide repeat YPSIP31758_RS07565 PF01435 Peptidase family M48 YPSIP31758_RS07570 PF01594 AI-2E family transporter YPSIP31758_RS07590 PF00578 AhpC/TSA family YPSIP31758_RS07595 PF01842 ACT domain YPSIP31758_RS07600 PF00701 Dihydrodipicolinate synthetase family YPSIP31758_RS07605 PF06804 NlpB/DapX lipoprotein YPSIP31758_RS07610 PF01259 SAICAR synthetase YPSIP31758_RS07615 PF04228 Putative neutral zinc metallopeptidase YPSIP31758_RS07620 PF04284 Protein of unknown function (DUF441) YPSIP31758_RS07625 PF17176 tRNA-binding domain YPSIP31758_RS07625 PF05127 Helicase YPSIP31758_RS07625 PF13718 GNAT acetyltransferase 2 YPSIP31758_RS07625 PF08351 Domain of unknown function (DUF1726) YPSIP31758_RS07630 PF13980 Uncharacterised protein family (UPF0370) YPSIP31758_RS07635 PF02557 D-alanyl-D-alanine carboxypeptidase YPSIP31758_RS07640 PF01546 Peptidase family M20/M25/M40 YPSIP31758_RS07640 PF07687 Peptidase dimerisation domain YPSIP31758_RS07645 PF03960 ArsC family YPSIP31758_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS07665 PF00005 ABC transporter YPSIP31758_RS07665 PF08402 TOBE domain YPSIP31758_RS07670 PF00884 Sulfatase YPSIP31758_RS07675 PF13186 Iron-sulfur cluster-binding domain YPSIP31758_RS07675 PF04055 Radical SAM superfamily YPSIP31758_RS07680 PF04307 LexA-binding, inner membrane-associated putative hydrolase YPSIP31758_RS07690 PF00873 AcrB/AcrD/AcrF family YPSIP31758_RS07700 PF00072 Response regulator receiver domain YPSIP31758_RS07700 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS07705 PF13187 4Fe-4S dicluster domain YPSIP31758_RS07705 PF00037 4Fe-4S binding domain YPSIP31758_RS07705 PF12800 4Fe-4S binding domain YPSIP31758_RS07710 PF03927 NapD protein YPSIP31758_RS07715 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS07715 PF10518 TAT (twin-arginine translocation) pathway signal sequence YPSIP31758_RS07715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPSIP31758_RS07715 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS07720 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) YPSIP31758_RS07725 PF03264 NapC/NirT cytochrome c family, N-terminal region YPSIP31758_RS07730 PF00293 NUDIX domain YPSIP31758_RS07735 PF03949 Malic enzyme, NAD binding domain YPSIP31758_RS07735 PF00390 Malic enzyme, N-terminal domain YPSIP31758_RS07735 PF01515 Phosphate acetyl/butaryl transferase YPSIP31758_RS07740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 YPSIP31758_RS07745 PF01218 Coproporphyrinogen III oxidase YPSIP31758_RS07750 PF00583 Acetyltransferase (GNAT) family YPSIP31758_RS07775 PF00583 Acetyltransferase (GNAT) family YPSIP31758_RS07790 PF03212 Pertactin YPSIP31758_RS07790 PF16168 Adhesin of bacterial autotransporter system, probable stalk YPSIP31758_RS07790 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS07790 PF03797 Autotransporter beta-domain YPSIP31758_RS07795 PF04076 Bacterial OB fold (BOF) protein YPSIP31758_RS07800 PF06572 Protein of unknown function (DUF1131) YPSIP31758_RS07805 PF04261 Dyp-type peroxidase family YPSIP31758_RS07810 PF00701 Dihydrodipicolinate synthetase family YPSIP31758_RS07815 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase YPSIP31758_RS07820 PF00480 ROK family YPSIP31758_RS07825 PF04074 YhcH/YjgK/YiaL YPSIP31758_RS07835 PF01418 Helix-turn-helix domain, rpiR family YPSIP31758_RS07835 PF01380 SIS domain YPSIP31758_RS07840 PF07690 Major Facilitator Superfamily YPSIP31758_RS07850 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS07855 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS07860 PF00005 ABC transporter YPSIP31758_RS07865 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS07870 PF00072 Response regulator receiver domain YPSIP31758_RS07870 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS07875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS07875 PF00672 HAMP domain YPSIP31758_RS07875 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS07885 PF00155 Aminotransferase class I and II YPSIP31758_RS07890 PF00557 Metallopeptidase family M24 YPSIP31758_RS07900 PF00474 Sodium:solute symporter family YPSIP31758_RS07905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPSIP31758_RS07905 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS07910 PF00005 ABC transporter YPSIP31758_RS07910 PF12704 MacB-like periplasmic core domain YPSIP31758_RS07910 PF02687 FtsX-like permease family YPSIP31758_RS07915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS07920 PF00072 Response regulator receiver domain YPSIP31758_RS07920 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS07925 PF16527 Two-component sensor protein CpxA, periplasmic domain YPSIP31758_RS07925 PF00672 HAMP domain YPSIP31758_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS07925 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS07930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YPSIP31758_RS07935 PF00391 PEP-utilising enzyme, mobile domain YPSIP31758_RS07935 PF02896 PEP-utilising enzyme, TIM barrel domain YPSIP31758_RS07935 PF05524 PEP-utilising enzyme, N-terminal YPSIP31758_RS07940 PF00381 PTS HPr component phosphorylation site YPSIP31758_RS07945 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS07955 PF04354 ZipA, C-terminal FtsZ-binding domain YPSIP31758_RS07960 PF01653 NAD-dependent DNA ligase adenylation domain YPSIP31758_RS07960 PF00533 BRCA1 C Terminus (BRCT) domain YPSIP31758_RS07960 PF03120 NAD-dependent DNA ligase OB-fold domain YPSIP31758_RS07960 PF12826 Helix-hairpin-helix motif YPSIP31758_RS07960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YPSIP31758_RS07965 PF12843 Putative quorum-sensing-regulated virulence factor YPSIP31758_RS07990 PF00749 tRNA synthetases class I (E and Q), catalytic domain YPSIP31758_RS08015 PF01773 Na+ dependent nucleoside transporter N-terminus YPSIP31758_RS08015 PF07662 Na+ dependent nucleoside transporter C-terminus YPSIP31758_RS08015 PF07670 Nucleoside recognition YPSIP31758_RS08020 PF01566 Natural resistance-associated macrophage protein YPSIP31758_RS08030 PF00248 Aldo/keto reductase family YPSIP31758_RS08035 PF03466 LysR substrate binding domain YPSIP31758_RS08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS08045 PF02685 Glucokinase YPSIP31758_RS08050 PF07350 Protein of unknown function (DUF1479) YPSIP31758_RS08055 PF00155 Aminotransferase class I and II YPSIP31758_RS08060 PF01292 Prokaryotic cytochrome b561 YPSIP31758_RS08070 PF03783 Curli production assembly/transport component CsgG YPSIP31758_RS08080 PF05643 Putative bacterial lipoprotein (DUF799) YPSIP31758_RS08090 PF02613 Nitrate reductase delta subunit YPSIP31758_RS08095 PF04976 DMSO reductase anchor subunit (DmsC) YPSIP31758_RS08100 PF13247 4Fe-4S dicluster domain YPSIP31758_RS08100 PF12800 4Fe-4S binding domain YPSIP31758_RS08105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPSIP31758_RS08105 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS08105 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS08120 PF05638 Type VI secretion system effector, Hcp YPSIP31758_RS08130 PF00005 ABC transporter YPSIP31758_RS08135 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS08145 PF13406 Transglycosylase SLT domain YPSIP31758_RS08190 PF05947 Type VI secretion system, TssF YPSIP31758_RS08195 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS08195 PF17871 AAA lid domain YPSIP31758_RS08195 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS08195 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS08200 PF16970 Type-1 fimbrial protein, A YPSIP31758_RS08205 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS08205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS08210 PF13953 PapC C-terminal domain YPSIP31758_RS08210 PF00577 Outer membrane usher protein YPSIP31758_RS08210 PF13954 PapC N-terminal domain YPSIP31758_RS08215 PF13954 PapC N-terminal domain YPSIP31758_RS08215 PF00577 Outer membrane usher protein YPSIP31758_RS08215 PF13953 PapC C-terminal domain YPSIP31758_RS08225 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPSIP31758_RS08230 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPSIP31758_RS08245 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE YPSIP31758_RS08255 PF06761 Intracellular multiplication and human macrophage-killing YPSIP31758_RS08255 PF06744 Type VI secretion protein IcmF C-terminal YPSIP31758_RS08255 PF14331 ImcF-related N-terminal domain YPSIP31758_RS08260 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS08275 PF07024 ImpE protein YPSIP31758_RS08290 PF03831 PhnA domain YPSIP31758_RS08290 PF08274 PhnA Zinc-Ribbon YPSIP31758_RS08300 PF04011 LemA family YPSIP31758_RS08330 PF00005 ABC transporter YPSIP31758_RS08335 PF03379 CcmB protein YPSIP31758_RS08340 PF01578 Cytochrome C assembly protein YPSIP31758_RS08345 PF04995 Heme exporter protein D (CcmD) YPSIP31758_RS08350 PF03100 CcmE YPSIP31758_RS08355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YPSIP31758_RS08355 PF01578 Cytochrome C assembly protein YPSIP31758_RS08360 PF08534 Redoxin YPSIP31758_RS08365 PF03918 Cytochrome C biogenesis protein YPSIP31758_RS08370 PF03918 Cytochrome C biogenesis protein YPSIP31758_RS08375 PF04333 MlaA lipoprotein YPSIP31758_RS08380 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPSIP31758_RS08385 PF04175 Protein of unknown function (DUF406) YPSIP31758_RS08390 PF02803 Thiolase, C-terminal domain YPSIP31758_RS08390 PF00108 Thiolase, N-terminal domain YPSIP31758_RS08395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YPSIP31758_RS08395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YPSIP31758_RS08395 PF00378 Enoyl-CoA hydratase/isomerase YPSIP31758_RS08400 PF00300 Histidine phosphatase superfamily (branch 1) YPSIP31758_RS08405 PF01713 Smr domain YPSIP31758_RS08410 PF05175 Methyltransferase small domain YPSIP31758_RS08415 PF01264 Chorismate synthase YPSIP31758_RS08420 PF03411 Penicillin-insensitive murein endopeptidase YPSIP31758_RS08425 PF01925 Sulfite exporter TauE/SafE YPSIP31758_RS08430 PF04315 Elongation factor P hydroxylase YPSIP31758_RS08435 PF08891 YfcL protein YPSIP31758_RS08440 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YPSIP31758_RS08440 PF01266 FAD dependent oxidoreductase YPSIP31758_RS08445 PF00109 Beta-ketoacyl synthase, N-terminal domain YPSIP31758_RS08445 PF02801 Beta-ketoacyl synthase, C-terminal domain YPSIP31758_RS08450 PF01177 Asp/Glu/Hydantoin racemase YPSIP31758_RS08455 PF00419 Fimbrial protein YPSIP31758_RS08465 PF00892 EamA-like transporter family YPSIP31758_RS08480 PF11890 Domain of unknown function (DUF3410) YPSIP31758_RS08480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPSIP31758_RS08480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPSIP31758_RS08485 PF01118 Semialdehyde dehydrogenase, NAD binding domain YPSIP31758_RS08485 PF02774 Semialdehyde dehydrogenase, dimerisation domain YPSIP31758_RS08490 PF01416 tRNA pseudouridine synthase YPSIP31758_RS08495 PF09335 SNARE associated Golgi protein YPSIP31758_RS08500 PF01039 Carboxyl transferase domain YPSIP31758_RS08500 PF17848 Acetyl-coA carboxylase zinc finger domain YPSIP31758_RS08505 PF02875 Mur ligase family, glutamate ligase domain YPSIP31758_RS08505 PF08245 Mur ligase middle domain YPSIP31758_RS08510 PF05036 Sporulation related domain YPSIP31758_RS08515 PF02674 Colicin V production protein YPSIP31758_RS08520 PF00156 Phosphoribosyl transferase domain YPSIP31758_RS08525 PF02441 Flavoprotein YPSIP31758_RS08530 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS08535 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS08540 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS08545 PF00005 ABC transporter YPSIP31758_RS08550 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS08550 PF08338 Domain of unknown function (DUF1731) YPSIP31758_RS08560 PF12850 Calcineurin-like phosphoesterase superfamily domain YPSIP31758_RS08565 PF00293 NUDIX domain YPSIP31758_RS08570 PF03611 PTS system sugar-specific permease component YPSIP31758_RS08580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPSIP31758_RS08585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPSIP31758_RS08585 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS08590 PF07085 DRTGG domain YPSIP31758_RS08590 PF01515 Phosphate acetyl/butaryl transferase YPSIP31758_RS08595 PF00871 Acetokinase family YPSIP31758_RS08605 PF04217 Protein of unknown function, DUF412 YPSIP31758_RS08610 PF03887 YfbU domain YPSIP31758_RS08615 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS08620 PF02080 TrkA-C domain YPSIP31758_RS08620 PF03600 Citrate transporter YPSIP31758_RS08635 PF00155 Aminotransferase class I and II YPSIP31758_RS08645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS08645 PF03466 LysR substrate binding domain YPSIP31758_RS08650 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YPSIP31758_RS08655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YPSIP31758_RS08660 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YPSIP31758_RS08660 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YPSIP31758_RS08670 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YPSIP31758_RS08670 PF10531 SLBB domain YPSIP31758_RS08670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YPSIP31758_RS08675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YPSIP31758_RS08675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPSIP31758_RS08675 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS08675 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS08680 PF00146 NADH dehydrogenase YPSIP31758_RS08685 PF12838 4Fe-4S dicluster domain YPSIP31758_RS08690 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YPSIP31758_RS08695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YPSIP31758_RS08700 PF00361 Proton-conducting membrane transporter YPSIP31758_RS08700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YPSIP31758_RS08705 PF00361 Proton-conducting membrane transporter YPSIP31758_RS08710 PF00361 Proton-conducting membrane transporter YPSIP31758_RS08720 PF04074 YhcH/YjgK/YiaL YPSIP31758_RS08725 PF01202 Shikimate kinase YPSIP31758_RS08730 PF00106 short chain dehydrogenase YPSIP31758_RS08735 PF02638 Glycosyl hydrolase-like 10 YPSIP31758_RS08740 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS08750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPSIP31758_RS08750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPSIP31758_RS08755 PF00920 Dehydratase family YPSIP31758_RS08770 PF05957 Bacterial protein of unknown function (DUF883) YPSIP31758_RS08780 PF00425 chorismate binding enzyme YPSIP31758_RS08785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPSIP31758_RS08785 PF16582 Middle domain of thiamine pyrophosphate YPSIP31758_RS08785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPSIP31758_RS08790 PF12697 Alpha/beta hydrolase family YPSIP31758_RS08795 PF00378 Enoyl-CoA hydratase/isomerase YPSIP31758_RS08800 PF13378 Enolase C-terminal domain-like YPSIP31758_RS08805 PF13193 AMP-binding enzyme C-terminal domain YPSIP31758_RS08805 PF00501 AMP-binding enzyme YPSIP31758_RS08810 PF02885 Glycosyl transferase family, helical bundle domain YPSIP31758_RS08815 PF07338 Protein of unknown function (DUF1471) YPSIP31758_RS08820 PF05971 RNA methyltransferase YPSIP31758_RS08825 PF08447 PAS fold YPSIP31758_RS08825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS08825 PF13426 PAS domain YPSIP31758_RS08830 PF00005 ABC transporter YPSIP31758_RS08835 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS08840 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS08850 PF00210 Ferritin-like domain YPSIP31758_RS08855 PF13649 Methyltransferase domain YPSIP31758_RS08865 PF00892 EamA-like transporter family YPSIP31758_RS08870 PF13505 Outer membrane protein beta-barrel domain YPSIP31758_RS08890 PF08240 Alcohol dehydrogenase GroES-like domain YPSIP31758_RS08890 PF00107 Zinc-binding dehydrogenase YPSIP31758_RS08895 PF13407 Periplasmic binding protein domain YPSIP31758_RS08900 PF00005 ABC transporter YPSIP31758_RS08905 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS08910 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS08915 PF03466 LysR substrate binding domain YPSIP31758_RS08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS08920 PF00180 Isocitrate/isopropylmalate dehydrogenase YPSIP31758_RS08930 PF02028 BCCT, betaine/carnitine/choline family transporter YPSIP31758_RS08935 PF00355 Rieske [2Fe-2S] domain YPSIP31758_RS08935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YPSIP31758_RS08940 PF00970 Oxidoreductase FAD-binding domain YPSIP31758_RS08940 PF00111 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS08940 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS08945 PF08479 POTRA domain, ShlB-type YPSIP31758_RS08945 PF17287 POTRA domain YPSIP31758_RS08945 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPSIP31758_RS08955 PF18624 CDI immunity protein YPSIP31758_RS08960 PF13332 Hemagglutinin repeat YPSIP31758_RS08960 PF15526 Novel toxin 21 YPSIP31758_RS08960 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS08960 PF05860 haemagglutination activity domain YPSIP31758_RS08960 PF05594 Haemagluttinin repeat YPSIP31758_RS08970 PF17912 MalK OB fold domain YPSIP31758_RS08970 PF00005 ABC transporter YPSIP31758_RS08975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPSIP31758_RS08975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPSIP31758_RS08975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPSIP31758_RS08975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPSIP31758_RS08980 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS09000 PF04041 beta-1,4-mannooligosaccharide phosphorylase YPSIP31758_RS09020 PF00924 Mechanosensitive ion channel YPSIP31758_RS09025 PF01867 CRISPR associated protein Cas1 YPSIP31758_RS09035 PF09611 CRISPR-associated protein (Cas_Csy1) YPSIP31758_RS09040 PF09614 CRISPR-associated protein (Cas_Csy2) YPSIP31758_RS09045 PF09615 CRISPR-associated protein (Cas_Csy3) YPSIP31758_RS09050 PF09618 CRISPR-associated protein (Cas_Csy4) YPSIP31758_RS09055 PF00248 Aldo/keto reductase family YPSIP31758_RS09065 PF00083 Sugar (and other) transporter YPSIP31758_RS09075 PF03466 LysR substrate binding domain YPSIP31758_RS09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS09080 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS09080 PF03472 Autoinducer binding domain YPSIP31758_RS09085 PF00765 Autoinducer synthase YPSIP31758_RS09095 PF03471 Transporter associated domain YPSIP31758_RS09095 PF02080 TrkA-C domain YPSIP31758_RS09095 PF00999 Sodium/hydrogen exchanger family YPSIP31758_RS09105 PF01757 Acyltransferase family YPSIP31758_RS09110 PF04349 Periplasmic glucan biosynthesis protein, MdoG YPSIP31758_RS09115 PF00535 Glycosyl transferase family 2 YPSIP31758_RS09120 PF07119 Protein of unknown function (DUF1375) YPSIP31758_RS09125 PF00854 POT family YPSIP31758_RS09130 PF03279 Bacterial lipid A biosynthesis acyltransferase YPSIP31758_RS09150 PF12368 Rhodanase C-terminal YPSIP31758_RS09150 PF17773 UPF0176 acylphosphatase like domain YPSIP31758_RS09150 PF00581 Rhodanese-like domain YPSIP31758_RS09155 PF01594 AI-2E family transporter YPSIP31758_RS09160 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS09165 PF01266 FAD dependent oxidoreductase YPSIP31758_RS09170 PF13991 BssS protein family YPSIP31758_RS09180 PF06183 DinI-like family YPSIP31758_RS09185 PF01979 Amidohydrolase family YPSIP31758_RS09190 PF03992 Antibiotic biosynthesis monooxygenase YPSIP31758_RS09195 PF10150 Ribonuclease E/G family YPSIP31758_RS09195 PF00575 S1 RNA binding domain YPSIP31758_RS09195 PF12111 Polyribonucleotide phosphorylase C terminal YPSIP31758_RS09200 PF01479 S4 domain YPSIP31758_RS09200 PF00849 RNA pseudouridylate synthase YPSIP31758_RS09205 PF02545 Maf-like protein YPSIP31758_RS09210 PF02620 Large ribosomal RNA subunit accumulation protein YceD YPSIP31758_RS09215 PF01783 Ribosomal L32p protein family YPSIP31758_RS09220 PF02504 Fatty acid synthesis protein YPSIP31758_RS09225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPSIP31758_RS09225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YPSIP31758_RS09230 PF00698 Acyl transferase domain YPSIP31758_RS09240 PF00550 Phosphopantetheine attachment site YPSIP31758_RS09245 PF02801 Beta-ketoacyl synthase, C-terminal domain YPSIP31758_RS09245 PF00109 Beta-ketoacyl synthase, N-terminal domain YPSIP31758_RS09250 PF01063 Amino-transferase class IV YPSIP31758_RS09255 PF02618 YceG-like family YPSIP31758_RS09260 PF02223 Thymidylate kinase YPSIP31758_RS09265 PF09115 DNA polymerase III, delta subunit, C terminal YPSIP31758_RS09270 PF01026 TatD related DNase YPSIP31758_RS09275 PF00367 phosphotransferase system, EIIB YPSIP31758_RS09275 PF02378 Phosphotransferase system, EIIC YPSIP31758_RS09280 PF08501 Shikimate dehydrogenase substrate binding domain YPSIP31758_RS09285 PF01230 HIT domain YPSIP31758_RS09290 PF07233 Protein of unknown function (DUF1425) YPSIP31758_RS09295 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YPSIP31758_RS09295 PF13036 Peptidoglycan-synthase activator LpoB YPSIP31758_RS09300 PF01636 Phosphotransferase enzyme family YPSIP31758_RS09305 PF00933 Glycosyl hydrolase family 3 N terminal domain YPSIP31758_RS09310 PF05728 Uncharacterised protein family (UPF0227) YPSIP31758_RS09315 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS09330 PF05433 Glycine zipper 2TM domain YPSIP31758_RS09335 PF17757 UvrB interaction domain YPSIP31758_RS09335 PF03461 TRCF domain YPSIP31758_RS09335 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS09335 PF02559 CarD-like/TRCF domain YPSIP31758_RS09335 PF00270 DEAD/DEAH box helicase YPSIP31758_RS09340 PF12704 MacB-like periplasmic core domain YPSIP31758_RS09340 PF02687 FtsX-like permease family YPSIP31758_RS09345 PF00005 ABC transporter YPSIP31758_RS09350 PF02687 FtsX-like permease family YPSIP31758_RS09350 PF12704 MacB-like periplasmic core domain YPSIP31758_RS09355 PF00480 ROK family YPSIP31758_RS09360 PF02146 Sir2 family YPSIP31758_RS09365 PF07687 Peptidase dimerisation domain YPSIP31758_RS09365 PF01546 Peptidase family M20/M25/M40 YPSIP31758_RS09370 PF08007 Cupin superfamily protein YPSIP31758_RS09375 PF08918 PhoQ Sensor YPSIP31758_RS09375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS09380 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS09380 PF00072 Response regulator receiver domain YPSIP31758_RS09390 PF00206 Lyase YPSIP31758_RS09390 PF08328 Adenylosuccinate lyase C-terminal YPSIP31758_RS09395 PF04356 Protein of unknown function (DUF489) YPSIP31758_RS09405 PF00293 NUDIX domain YPSIP31758_RS09410 PF00849 RNA pseudouridylate synthase YPSIP31758_RS09415 PF00180 Isocitrate/isopropylmalate dehydrogenase YPSIP31758_RS09420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPSIP31758_RS09420 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS09430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS09430 PF08447 PAS fold YPSIP31758_RS09435 PF05368 NmrA-like family YPSIP31758_RS09440 PF01638 HxlR-like helix-turn-helix YPSIP31758_RS09450 PF00328 Histidine phosphatase superfamily (branch 2) YPSIP31758_RS09455 PF14001 YdfZ protein YPSIP31758_RS09465 PF13404 AsnC-type helix-turn-helix domain YPSIP31758_RS09465 PF01037 Lrp/AsnC ligand binding domain YPSIP31758_RS09470 PF10777 Inner membrane protein YlaC YPSIP31758_RS09475 PF16197 Ketoacyl-synthetase C-terminal extension YPSIP31758_RS09475 PF00107 Zinc-binding dehydrogenase YPSIP31758_RS09475 PF14765 Polyketide synthase dehydratase YPSIP31758_RS09475 PF00550 Phosphopantetheine attachment site YPSIP31758_RS09475 PF00698 Acyl transferase domain YPSIP31758_RS09475 PF02801 Beta-ketoacyl synthase, C-terminal domain YPSIP31758_RS09475 PF08659 KR domain YPSIP31758_RS09475 PF08240 Alcohol dehydrogenase GroES-like domain YPSIP31758_RS09475 PF00109 Beta-ketoacyl synthase, N-terminal domain YPSIP31758_RS09480 PF02929 Beta galactosidase small chain YPSIP31758_RS09480 PF16353 Domain of unknown function(DUF4981) YPSIP31758_RS09480 PF02837 Glycosyl hydrolases family 2, sugar binding domain YPSIP31758_RS09480 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YPSIP31758_RS09480 PF00703 Glycosyl hydrolases family 2 YPSIP31758_RS09485 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS09490 PF10781 Dextransucrase DSRB YPSIP31758_RS09495 PF02203 Tar ligand binding domain homologue YPSIP31758_RS09495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS09495 PF00672 HAMP domain YPSIP31758_RS09505 PF02308 MgtC family YPSIP31758_RS09510 PF00689 Cation transporting ATPase, C-terminus YPSIP31758_RS09510 PF00690 Cation transporter/ATPase, N-terminus YPSIP31758_RS09515 PF05247 Flagellar transcriptional activator (FlhD) YPSIP31758_RS09520 PF05280 Flagellar transcriptional activator (FlhC) YPSIP31758_RS09525 PF01618 MotA/TolQ/ExbB proton channel family YPSIP31758_RS09530 PF00691 OmpA family YPSIP31758_RS09530 PF13677 Membrane MotB of proton-channel complex MotA/MotB YPSIP31758_RS09535 PF09078 CheY binding YPSIP31758_RS09535 PF01584 CheW-like domain YPSIP31758_RS09535 PF01627 Hpt domain YPSIP31758_RS09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS09535 PF02895 Signal transducing histidine kinase, homodimeric domain YPSIP31758_RS09540 PF01584 CheW-like domain YPSIP31758_RS09555 PF00672 HAMP domain YPSIP31758_RS09555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS09555 PF02203 Tar ligand binding domain homologue YPSIP31758_RS09560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS09560 PF02203 Tar ligand binding domain homologue YPSIP31758_RS09560 PF00672 HAMP domain YPSIP31758_RS09565 PF03705 CheR methyltransferase, all-alpha domain YPSIP31758_RS09565 PF01739 CheR methyltransferase, SAM binding domain YPSIP31758_RS09570 PF00072 Response regulator receiver domain YPSIP31758_RS09570 PF01339 CheB methylesterase YPSIP31758_RS09575 PF00072 Response regulator receiver domain YPSIP31758_RS09580 PF04344 Chemotaxis phosphatase, CheZ YPSIP31758_RS09590 PF01510 N-acetylmuramoyl-L-alanine amidase YPSIP31758_RS09595 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS09595 PF03895 YadA-like membrane anchor domain YPSIP31758_RS09595 PF05662 Coiled stalk of trimeric autotransporter adhesin YPSIP31758_RS09595 PF05658 Head domain of trimeric autotransporter adhesin YPSIP31758_RS09595 PF03895 YadA-like membrane anchor domain YPSIP31758_RS09595 PF05658 Head domain of trimeric autotransporter adhesin YPSIP31758_RS09595 PF05662 Coiled stalk of trimeric autotransporter adhesin YPSIP31758_RS09595 PF05658 Head domain of trimeric autotransporter adhesin YPSIP31758_RS09595 PF03895 YadA-like membrane anchor domain YPSIP31758_RS09595 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS09595 PF05662 Coiled stalk of trimeric autotransporter adhesin YPSIP31758_RS09595 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS09605 PF00842 Alanine racemase, C-terminal domain YPSIP31758_RS09605 PF01168 Alanine racemase, N-terminal domain YPSIP31758_RS09635 PF07351 Protein of unknown function (DUF1480) YPSIP31758_RS09670 PF02470 MlaD protein YPSIP31758_RS09675 PF04403 Paraquat-inducible protein A YPSIP31758_RS09680 PF13185 GAF domain YPSIP31758_RS09685 PF04352 ProQ/FINO family YPSIP31758_RS09685 PF17516 ProQ C-terminal domain YPSIP31758_RS09690 PF11818 C-terminal domain of tail specific protease (DUF3340) YPSIP31758_RS09690 PF00595 PDZ domain YPSIP31758_RS09690 PF03572 Peptidase family S41 YPSIP31758_RS09690 PF17804 Tail specific protease N-terminal domain YPSIP31758_RS09695 PF01797 Transposase IS200 like YPSIP31758_RS09700 PF01435 Peptidase family M48 YPSIP31758_RS09705 PF00419 Fimbrial protein YPSIP31758_RS09710 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS09710 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS09715 PF00577 Outer membrane usher protein YPSIP31758_RS09715 PF13953 PapC C-terminal domain YPSIP31758_RS09715 PF13954 PapC N-terminal domain YPSIP31758_RS09725 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS09725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS09730 PF07690 Major Facilitator Superfamily YPSIP31758_RS09735 PF14583 Oligogalacturonate lyase YPSIP31758_RS09740 PF01614 Bacterial transcriptional regulator YPSIP31758_RS09740 PF09339 IclR helix-turn-helix domain YPSIP31758_RS09745 PF01510 N-acetylmuramoyl-L-alanine amidase YPSIP31758_RS09750 PF00375 Sodium:dicarboxylate symporter family YPSIP31758_RS09755 PF04307 LexA-binding, inner membrane-associated putative hydrolase YPSIP31758_RS09760 PF06178 Oligogalacturonate-specific porin protein (KdgM) YPSIP31758_RS09765 PF01547 Bacterial extracellular solute-binding protein YPSIP31758_RS09770 PF00005 ABC transporter YPSIP31758_RS09770 PF03459 TOBE domain YPSIP31758_RS09770 PF17912 MalK OB fold domain YPSIP31758_RS09775 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS09780 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS09785 PF06917 Periplasmic pectate lyase YPSIP31758_RS09795 PF04962 KduI/IolB family YPSIP31758_RS09800 PF07883 Cupin domain YPSIP31758_RS09805 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS09810 PF14002 YniB-like protein YPSIP31758_RS09815 PF03881 Fructosamine kinase YPSIP31758_RS09825 PF00950 ABC 3 transport family YPSIP31758_RS09830 PF00950 ABC 3 transport family YPSIP31758_RS09835 PF00005 ABC transporter YPSIP31758_RS09840 PF01297 Zinc-uptake complex component A periplasmic YPSIP31758_RS09845 PF01464 Transglycosylase SLT domain YPSIP31758_RS09850 PF01914 MarC family integral membrane protein YPSIP31758_RS09865 PF13619 KTSC domain YPSIP31758_RS09870 PF02824 TGS domain YPSIP31758_RS09870 PF03129 Anticodon binding domain YPSIP31758_RS09870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YPSIP31758_RS09870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YPSIP31758_RS09875 PF00707 Translation initiation factor IF-3, C-terminal domain YPSIP31758_RS09875 PF05198 Translation initiation factor IF-3, N-terminal domain YPSIP31758_RS09880 PF01632 Ribosomal protein L35 YPSIP31758_RS09885 PF00453 Ribosomal protein L20 YPSIP31758_RS09890 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YPSIP31758_RS09890 PF01409 tRNA synthetases class II core domain (F) YPSIP31758_RS09895 PF01588 Putative tRNA binding domain YPSIP31758_RS09895 PF03147 Ferredoxin-fold anticodon binding domain YPSIP31758_RS09895 PF03484 tRNA synthetase B5 domain YPSIP31758_RS09895 PF03483 B3/4 domain YPSIP31758_RS09895 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YPSIP31758_RS09900 PF00216 Bacterial DNA-binding protein YPSIP31758_RS09910 PF01032 FecCD transport family YPSIP31758_RS09915 PF00255 Glutathione peroxidase YPSIP31758_RS09920 PF00005 ABC transporter YPSIP31758_RS09925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YPSIP31758_RS09930 PF00535 Glycosyl transferase family 2 YPSIP31758_RS09935 PF01797 Transposase IS200 like YPSIP31758_RS09940 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS09940 PF02911 Formyl transferase, C-terminal domain YPSIP31758_RS09940 PF00551 Formyl transferase YPSIP31758_RS09945 PF01522 Polysaccharide deacetylase YPSIP31758_RS09950 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase YPSIP31758_RS09955 PF00892 EamA-like transporter family YPSIP31758_RS09965 PF00877 NlpC/P60 family YPSIP31758_RS09970 PF10437 Bacterial lipoate protein ligase C-terminus YPSIP31758_RS09970 PF03099 Biotin/lipoate A/B protein ligase family YPSIP31758_RS09975 PF02696 Uncharacterized ACR, YdiU/UPF0061 family YPSIP31758_RS09980 PF00793 DAHP synthetase I family YPSIP31758_RS09985 PF03618 Kinase/pyrophosphorylase YPSIP31758_RS09990 PF02896 PEP-utilising enzyme, TIM barrel domain YPSIP31758_RS09990 PF00391 PEP-utilising enzyme, mobile domain YPSIP31758_RS09990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YPSIP31758_RS09995 PF01594 AI-2E family transporter YPSIP31758_RS10000 PF13183 4Fe-4S dicluster domain YPSIP31758_RS10000 PF02913 FAD linked oxidases, C-terminal domain YPSIP31758_RS10000 PF01565 FAD binding domain YPSIP31758_RS10005 PF03061 Thioesterase superfamily YPSIP31758_RS10015 PF01521 Iron-sulphur cluster biosynthesis YPSIP31758_RS10020 PF01458 Uncharacterized protein family (UPF0051) YPSIP31758_RS10025 PF00005 ABC transporter YPSIP31758_RS10030 PF01458 Uncharacterized protein family (UPF0051) YPSIP31758_RS10035 PF00266 Aminotransferase class-V YPSIP31758_RS10040 PF02657 Fe-S metabolism associated domain YPSIP31758_RS10045 PF03734 L,D-transpeptidase catalytic domain YPSIP31758_RS10045 PF17969 L,D-transpeptidase C-terminal domain YPSIP31758_RS10045 PF01476 LysM domain YPSIP31758_RS10050 PF04728 Lipoprotein leucine-zipper YPSIP31758_RS10055 PF00224 Pyruvate kinase, barrel domain YPSIP31758_RS10055 PF02887 Pyruvate kinase, alpha/beta domain YPSIP31758_RS10075 PF01554 MatE YPSIP31758_RS10080 PF00677 Lumazine binding domain YPSIP31758_RS10090 PF07690 Major Facilitator Superfamily YPSIP31758_RS10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS10095 PF03466 LysR substrate binding domain YPSIP31758_RS10100 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS10105 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YPSIP31758_RS10105 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YPSIP31758_RS10110 PF00877 NlpC/P60 family YPSIP31758_RS10120 PF00462 Glutaredoxin YPSIP31758_RS10130 PF00929 Exonuclease YPSIP31758_RS10135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YPSIP31758_RS10145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YPSIP31758_RS10150 PF00440 Bacterial regulatory proteins, tetR family YPSIP31758_RS10150 PF16925 Tetracyclin repressor-like, C-terminal domain YPSIP31758_RS10155 PF00884 Sulfatase YPSIP31758_RS10155 PF08019 Phosphoethanolamine transferase EptA/EptB YPSIP31758_RS10160 PF06945 Protein of unknown function (DUF1289) YPSIP31758_RS10165 PF00248 Aldo/keto reductase family YPSIP31758_RS10170 PF01047 MarR family YPSIP31758_RS10175 PF01797 Transposase IS200 like YPSIP31758_RS10180 PF05433 Glycine zipper 2TM domain YPSIP31758_RS10185 PF03702 Anhydro-N-acetylmuramic acid kinase YPSIP31758_RS10190 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme YPSIP31758_RS10195 PF01243 Pyridoxamine 5'-phosphate oxidase YPSIP31758_RS10195 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YPSIP31758_RS10200 PF01479 S4 domain YPSIP31758_RS10200 PF00579 tRNA synthetases class I (W and Y) YPSIP31758_RS10205 PF08543 Phosphomethylpyrimidine kinase YPSIP31758_RS10210 PF02798 Glutathione S-transferase, N-terminal domain YPSIP31758_RS10210 PF00043 Glutathione S-transferase, C-terminal domain YPSIP31758_RS10215 PF11656 YjbD family (DUF3811) YPSIP31758_RS10220 PF04893 Yip1 domain YPSIP31758_RS10225 PF00854 POT family YPSIP31758_RS10235 PF00005 ABC transporter YPSIP31758_RS10240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS10240 PF00005 ABC transporter YPSIP31758_RS10245 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS10245 PF12911 N-terminal TM domain of oligopeptide transport permease C YPSIP31758_RS10250 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS10255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS10265 PF00158 Sigma-54 interaction domain YPSIP31758_RS10265 PF02954 Bacterial regulatory protein, Fis family YPSIP31758_RS10270 PF04012 PspA/IM30 family YPSIP31758_RS10275 PF06667 Phage shock protein B YPSIP31758_RS10280 PF04024 PspC domain YPSIP31758_RS10290 PF04317 YcjX-like family, DUF463 YPSIP31758_RS10295 PF05128 Domain of unknown function (DUF697) YPSIP31758_RS10300 PF08808 RES domain YPSIP31758_RS10305 PF09722 Protein of unknown function (DUF2384) YPSIP31758_RS10310 PF18024 Helix-turn-helix domain YPSIP31758_RS10310 PF00158 Sigma-54 interaction domain YPSIP31758_RS10315 PF08534 Redoxin YPSIP31758_RS10320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YPSIP31758_RS10320 PF13378 Enolase C-terminal domain-like YPSIP31758_RS10325 PF00246 Zinc carboxypeptidase YPSIP31758_RS10330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS10335 PF01544 CorA-like Mg2+ transporter protein YPSIP31758_RS10350 PF07859 alpha/beta hydrolase fold YPSIP31758_RS10355 PF01171 PP-loop family YPSIP31758_RS10360 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YPSIP31758_RS10360 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YPSIP31758_RS10360 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YPSIP31758_RS10360 PF10371 Domain of unknown function YPSIP31758_RS10360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPSIP31758_RS10365 PF00893 Small Multidrug Resistance protein YPSIP31758_RS10370 PF02308 MgtC family YPSIP31758_RS10375 PF03891 Domain of unknown function (DUF333) YPSIP31758_RS10380 PF03724 META domain YPSIP31758_RS10385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPSIP31758_RS10385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPSIP31758_RS10390 PF11739 Dicarboxylate transport YPSIP31758_RS10395 PF13617 YnbE-like lipoprotein YPSIP31758_RS10400 PF07027 Protein of unknown function (DUF1318) YPSIP31758_RS10405 PF01232 Mannitol dehydrogenase Rossmann domain YPSIP31758_RS10405 PF08125 Mannitol dehydrogenase C-terminal domain YPSIP31758_RS10410 PF00325 Bacterial regulatory proteins, crp family YPSIP31758_RS10410 PF04198 Putative sugar-binding domain YPSIP31758_RS10415 PF02525 Flavodoxin-like fold YPSIP31758_RS10420 PF11898 Domain of unknown function (DUF3418) YPSIP31758_RS10420 PF04408 Helicase associated domain (HA2) YPSIP31758_RS10420 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS10420 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YPSIP31758_RS10420 PF00270 DEAD/DEAH box helicase YPSIP31758_RS10435 PF00089 Trypsin YPSIP31758_RS10450 PF01292 Prokaryotic cytochrome b561 YPSIP31758_RS10455 PF04264 YceI-like domain YPSIP31758_RS10465 PF18807 Tripartite Tc toxins repeat YPSIP31758_RS10465 PF14431 YwqJ-like deaminase YPSIP31758_RS10470 PF02074 Carboxypeptidase Taq (M32) metallopeptidase YPSIP31758_RS10475 PF00672 HAMP domain YPSIP31758_RS10475 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS10480 PF00072 Response regulator receiver domain YPSIP31758_RS10480 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS10490 PF13520 Amino acid permease YPSIP31758_RS10495 PF07338 Protein of unknown function (DUF1471) YPSIP31758_RS10505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YPSIP31758_RS10505 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YPSIP31758_RS10505 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YPSIP31758_RS10510 PF02233 NAD(P) transhydrogenase beta subunit YPSIP31758_RS10515 PF00582 Universal stress protein family YPSIP31758_RS10520 PF00027 Cyclic nucleotide-binding domain YPSIP31758_RS10520 PF13545 Crp-like helix-turn-helix domain YPSIP31758_RS10525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YPSIP31758_RS10525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YPSIP31758_RS10530 PF00245 Alkaline phosphatase YPSIP31758_RS10545 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS10550 PF01842 ACT domain YPSIP31758_RS10555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPSIP31758_RS10555 PF00205 Thiamine pyrophosphate enzyme, central domain YPSIP31758_RS10555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPSIP31758_RS10580 PF01048 Phosphorylase superfamily YPSIP31758_RS10580 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus YPSIP31758_RS10585 PF00005 ABC transporter YPSIP31758_RS10590 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS10595 PF09084 NMT1/THI5 like YPSIP31758_RS10605 PF00005 ABC transporter YPSIP31758_RS10610 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS10615 PF13407 Periplasmic binding protein domain YPSIP31758_RS10625 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS10630 PF03553 Na+/H+ antiporter family YPSIP31758_RS10635 PF00155 Aminotransferase class I and II YPSIP31758_RS10650 PF00892 EamA-like transporter family YPSIP31758_RS10660 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS10665 PF02954 Bacterial regulatory protein, Fis family YPSIP31758_RS10665 PF00158 Sigma-54 interaction domain YPSIP31758_RS10665 PF01590 GAF domain YPSIP31758_RS10670 PF00106 short chain dehydrogenase YPSIP31758_RS10675 PF06932 Protein of unknown function (DUF1283) YPSIP31758_RS10680 PF06649 Protein of unknown function (DUF1161) YPSIP31758_RS10685 PF00654 Voltage gated chloride channel YPSIP31758_RS10695 PF00480 ROK family YPSIP31758_RS10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS10700 PF03466 LysR substrate binding domain YPSIP31758_RS10705 PF07690 Major Facilitator Superfamily YPSIP31758_RS10710 PF05472 DNA replication terminus site-binding protein (Ter protein) YPSIP31758_RS10715 PF00206 Lyase YPSIP31758_RS10715 PF10415 Fumarase C C-terminus YPSIP31758_RS10720 PF01238 Phosphomannose isomerase type I YPSIP31758_RS10725 PF06097 Bacterial protein of unknown function (DUF945) YPSIP31758_RS10740 PF00962 Adenosine/AMP deaminase YPSIP31758_RS10745 PF13593 SBF-like CPA transporter family (DUF4137) YPSIP31758_RS10750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPSIP31758_RS10750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YPSIP31758_RS10755 PF02311 AraC-like ligand binding domain YPSIP31758_RS10755 PF12833 Helix-turn-helix domain YPSIP31758_RS10760 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS10765 PF00005 ABC transporter YPSIP31758_RS10770 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPSIP31758_RS10775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS10780 PF11762 L-arabinose isomerase C-terminal domain YPSIP31758_RS10780 PF02610 L-arabinose isomerase YPSIP31758_RS10785 PF00005 ABC transporter YPSIP31758_RS10785 PF03412 Peptidase C39 family YPSIP31758_RS10785 PF00664 ABC transporter transmembrane region YPSIP31758_RS10790 PF13533 Biotin-lipoyl like YPSIP31758_RS10795 PF03412 Peptidase C39 family YPSIP31758_RS10795 PF00664 ABC transporter transmembrane region YPSIP31758_RS10795 PF00005 ABC transporter YPSIP31758_RS10800 PF10754 Protein of unknown function (DUF2569) YPSIP31758_RS10805 PF02508 Rnf-Nqr subunit, membrane protein YPSIP31758_RS10810 PF04060 Putative Fe-S cluster YPSIP31758_RS10815 PF13237 4Fe-4S dicluster domain YPSIP31758_RS10815 PF13375 RnfC Barrel sandwich hybrid domain YPSIP31758_RS10815 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YPSIP31758_RS10815 PF10531 SLBB domain YPSIP31758_RS10820 PF12833 Helix-turn-helix domain YPSIP31758_RS10820 PF06445 GyrI-like small molecule binding domain YPSIP31758_RS10825 PF03116 NQR2, RnfD, RnfE family YPSIP31758_RS10830 PF04205 FMN-binding domain YPSIP31758_RS10835 PF02508 Rnf-Nqr subunit, membrane protein YPSIP31758_RS10840 PF00730 HhH-GPD superfamily base excision DNA repair protein YPSIP31758_RS10840 PF00633 Helix-hairpin-helix motif YPSIP31758_RS10840 PF10576 Iron-sulfur binding domain of endonuclease III YPSIP31758_RS10845 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS10850 PF07690 Major Facilitator Superfamily YPSIP31758_RS10855 PF00575 S1 RNA binding domain YPSIP31758_RS10855 PF17876 Cold shock domain YPSIP31758_RS10855 PF00773 RNB domain YPSIP31758_RS10855 PF08206 Ribonuclease B OB domain YPSIP31758_RS10860 PF13722 5TM C-terminal transporter carbon starvation CstA YPSIP31758_RS10860 PF02554 Carbon starvation protein CstA YPSIP31758_RS10865 PF04328 Selenoprotein, putative YPSIP31758_RS10870 PF00923 Transaldolase/Fructose-6-phosphate aldolase YPSIP31758_RS10880 PF00596 Class II Aldolase and Adducin N-terminal domain YPSIP31758_RS10885 PF05433 Glycine zipper 2TM domain YPSIP31758_RS10890 PF01253 Translation initiation factor SUI1 YPSIP31758_RS10895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YPSIP31758_RS10905 PF18073 Rubredoxin metal binding domain YPSIP31758_RS10910 PF06305 Lipopolysaccharide assembly protein A domain YPSIP31758_RS10915 PF01569 PAP2 superfamily YPSIP31758_RS10920 PF00925 GTP cyclohydrolase II YPSIP31758_RS10925 PF00330 Aconitase family (aconitate hydratase) YPSIP31758_RS10925 PF00694 Aconitase C-terminal domain YPSIP31758_RS10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS10935 PF03466 LysR substrate binding domain YPSIP31758_RS10940 PF01396 Topoisomerase DNA binding C4 zinc finger YPSIP31758_RS10940 PF01751 Toprim domain YPSIP31758_RS10940 PF08272 Topoisomerase I zinc-ribbon-like YPSIP31758_RS10940 PF01131 DNA topoisomerase YPSIP31758_RS10950 PF10692 Protein of unknown function (DUF2498) YPSIP31758_RS10955 PF01343 Peptidase family S49 YPSIP31758_RS10955 PF08496 Peptidase family S49 N-terminal YPSIP31758_RS10960 PF00106 short chain dehydrogenase YPSIP31758_RS10965 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YPSIP31758_RS10970 PF00849 RNA pseudouridylate synthase YPSIP31758_RS10970 PF01479 S4 domain YPSIP31758_RS10975 PF01300 Telomere recombination YPSIP31758_RS10980 PF02811 PHP domain YPSIP31758_RS10995 PF04715 Anthranilate synthase component I, N terminal region YPSIP31758_RS10995 PF00425 chorismate binding enzyme YPSIP31758_RS11000 PF00117 Glutamine amidotransferase class-I YPSIP31758_RS11005 PF00591 Glycosyl transferase family, a/b domain YPSIP31758_RS11005 PF02885 Glycosyl transferase family, helical bundle domain YPSIP31758_RS11010 PF00218 Indole-3-glycerol phosphate synthase YPSIP31758_RS11010 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YPSIP31758_RS11015 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS11020 PF00290 Tryptophan synthase alpha chain YPSIP31758_RS11030 PF03922 OmpW family YPSIP31758_RS11050 PF04279 Intracellular septation protein A YPSIP31758_RS11055 PF03061 Thioesterase superfamily YPSIP31758_RS11060 PF03544 Gram-negative bacterial TonB protein C-terminal YPSIP31758_RS11065 PF03795 YCII-related domain YPSIP31758_RS11075 PF13505 Outer membrane protein beta-barrel domain YPSIP31758_RS11080 PF13091 PLD-like domain YPSIP31758_RS11080 PF13396 Phospholipase_D-nuclease N-terminal YPSIP31758_RS11085 PF04269 Protein of unknown function, DUF440 YPSIP31758_RS11095 PF00005 ABC transporter YPSIP31758_RS11095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS11100 PF00005 ABC transporter YPSIP31758_RS11100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS11105 PF12911 N-terminal TM domain of oligopeptide transport permease C YPSIP31758_RS11105 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS11115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS11120 PF01914 MarC family integral membrane protein YPSIP31758_RS11125 PF00465 Iron-containing alcohol dehydrogenase YPSIP31758_RS11125 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS11130 PF00265 Thymidine kinase YPSIP31758_RS11135 PF00816 H-NS histone family YPSIP31758_RS11145 PF01797 Transposase IS200 like YPSIP31758_RS11150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YPSIP31758_RS11150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YPSIP31758_RS11150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YPSIP31758_RS11155 PF00072 Response regulator receiver domain YPSIP31758_RS11160 PF02810 SEC-C motif YPSIP31758_RS11165 PF01842 ACT domain YPSIP31758_RS11165 PF00551 Formyl transferase YPSIP31758_RS11180 PF03466 LysR substrate binding domain YPSIP31758_RS11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS11185 PF03372 Endonuclease/Exonuclease/phosphatase family YPSIP31758_RS11190 PF00293 NUDIX domain YPSIP31758_RS11195 PF07383 Protein of unknown function (DUF1496) YPSIP31758_RS11200 PF01751 Toprim domain YPSIP31758_RS11200 PF01131 DNA topoisomerase YPSIP31758_RS11205 PF00586 AIR synthase related protein, N-terminal domain YPSIP31758_RS11205 PF02769 AIR synthase related protein, C-terminal domain YPSIP31758_RS11210 PF00881 Nitroreductase family YPSIP31758_RS11215 PF01343 Peptidase family S49 YPSIP31758_RS11220 PF17763 Glutaminase/Asparaginase C-terminal domain YPSIP31758_RS11220 PF00710 Asparaginase, N-terminal YPSIP31758_RS11225 PF00857 Isochorismatase family YPSIP31758_RS11230 PF07023 Protein of unknown function (DUF1315) YPSIP31758_RS11235 PF01641 SelR domain YPSIP31758_RS11240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YPSIP31758_RS11240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPSIP31758_RS11245 PF01263 Aldose 1-epimerase YPSIP31758_RS11250 PF06629 MltA-interacting protein MipA YPSIP31758_RS11255 PF06798 PrkA serine protein kinase C-terminal domain YPSIP31758_RS11255 PF08298 PrkA AAA domain YPSIP31758_RS11260 PF04285 Protein of unknown function (DUF444) YPSIP31758_RS11270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS11270 PF03466 LysR substrate binding domain YPSIP31758_RS11275 PF05726 Pirin C-terminal cupin domain YPSIP31758_RS11275 PF02678 Pirin YPSIP31758_RS11280 PF07690 Major Facilitator Superfamily YPSIP31758_RS11285 PF01266 FAD dependent oxidoreductase YPSIP31758_RS11290 PF04293 SpoVR like protein YPSIP31758_RS11295 PF07840 FadR C-terminal domain YPSIP31758_RS11295 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS11300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) YPSIP31758_RS11305 PF02600 Disulfide bond formation protein DsbB YPSIP31758_RS11320 PF00266 Aminotransferase class-V YPSIP31758_RS11330 PF03692 Putative zinc- or iron-chelating domain YPSIP31758_RS11335 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPSIP31758_RS11340 PF13406 Transglycosylase SLT domain YPSIP31758_RS11345 PF05166 YcgL domain YPSIP31758_RS11350 PF03775 Septum formation inhibitor MinC, C-terminal domain YPSIP31758_RS11350 PF05209 Septum formation inhibitor MinC, N-terminal domain YPSIP31758_RS11355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YPSIP31758_RS11360 PF03776 Septum formation topological specificity factor MinE YPSIP31758_RS11365 PF01612 3'-5' exonuclease YPSIP31758_RS11365 PF00570 HRDC domain YPSIP31758_RS11370 PF13193 AMP-binding enzyme C-terminal domain YPSIP31758_RS11370 PF00501 AMP-binding enzyme YPSIP31758_RS11375 PF03843 Outer membrane lipoprotein Slp family YPSIP31758_RS11380 PF00814 Glycoprotease family YPSIP31758_RS11385 PF04851 Type III restriction enzyme, res subunit YPSIP31758_RS11385 PF13307 Helicase C-terminal domain YPSIP31758_RS11390 PF01042 Endoribonuclease L-PSP YPSIP31758_RS11395 PF00893 Small Multidrug Resistance protein YPSIP31758_RS11400 PF00893 Small Multidrug Resistance protein YPSIP31758_RS11405 PF01081 KDPG and KHG aldolase YPSIP31758_RS11415 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YPSIP31758_RS11415 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YPSIP31758_RS11420 PF01380 SIS domain YPSIP31758_RS11420 PF01418 Helix-turn-helix domain, rpiR family YPSIP31758_RS11425 PF00224 Pyruvate kinase, barrel domain YPSIP31758_RS11425 PF02887 Pyruvate kinase, alpha/beta domain YPSIP31758_RS11430 PF03279 Bacterial lipid A biosynthesis acyltransferase YPSIP31758_RS11435 PF01551 Peptidase family M23 YPSIP31758_RS11435 PF01476 LysM domain YPSIP31758_RS11435 PF08525 Opacity-associated protein A N-terminal motif YPSIP31758_RS11440 PF01297 Zinc-uptake complex component A periplasmic YPSIP31758_RS11445 PF00005 ABC transporter YPSIP31758_RS11450 PF00950 ABC 3 transport family YPSIP31758_RS11455 PF05496 Holliday junction DNA helicase RuvB P-loop domain YPSIP31758_RS11455 PF05491 RuvB C-terminal winged helix domain YPSIP31758_RS11455 PF17864 RuvB AAA lid domain YPSIP31758_RS11460 PF01330 RuvA N terminal domain YPSIP31758_RS11460 PF07499 RuvA, C-terminal domain YPSIP31758_RS11465 PF02075 Crossover junction endodeoxyribonuclease RuvC YPSIP31758_RS11470 PF01709 Transcriptional regulator YPSIP31758_RS11475 PF00293 NUDIX domain YPSIP31758_RS11480 PF02938 GAD domain YPSIP31758_RS11480 PF01336 OB-fold nucleic acid binding domain YPSIP31758_RS11480 PF00152 tRNA synthetases class II (D, K and N) YPSIP31758_RS11485 PF01904 Protein of unknown function DUF72 YPSIP31758_RS11490 PF01124 MAPEG family YPSIP31758_RS11495 PF13649 Methyltransferase domain YPSIP31758_RS11500 PF08003 Protein of unknown function (DUF1698) YPSIP31758_RS11505 PF03932 CutC family YPSIP31758_RS11510 PF06185 YecM protein YPSIP31758_RS11515 PF00750 tRNA synthetases class I (R) YPSIP31758_RS11515 PF05746 DALR anticodon binding domain YPSIP31758_RS11515 PF03485 Arginyl tRNA synthetase N terminal domain YPSIP31758_RS11520 PF13332 Hemagglutinin repeat YPSIP31758_RS11520 PF05860 haemagglutination activity domain YPSIP31758_RS11525 PF08479 POTRA domain, ShlB-type YPSIP31758_RS11525 PF17287 POTRA domain YPSIP31758_RS11525 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPSIP31758_RS11530 PF03023 Lipid II flippase MurJ YPSIP31758_RS11535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPSIP31758_RS11540 PF04337 Protein of unknown function, DUF480 YPSIP31758_RS11545 PF13302 Acetyltransferase (GNAT) domain YPSIP31758_RS11550 PF07690 Major Facilitator Superfamily YPSIP31758_RS11555 PF07273 Protein of unknown function (DUF1439) YPSIP31758_RS11560 PF02613 Nitrate reductase delta subunit YPSIP31758_RS11565 PF02811 PHP domain YPSIP31758_RS11575 PF00480 ROK family YPSIP31758_RS11575 PF01325 Iron dependent repressor, N-terminal DNA binding domain YPSIP31758_RS11580 PF03009 Glycerophosphoryl diester phosphodiesterase family YPSIP31758_RS11585 PF00005 ABC transporter YPSIP31758_RS11585 PF08402 TOBE domain YPSIP31758_RS11590 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS11595 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS11605 PF03009 Glycerophosphoryl diester phosphodiesterase family YPSIP31758_RS11620 PF01740 STAS domain YPSIP31758_RS11620 PF00916 Sulfate permease family YPSIP31758_RS11625 PF00793 DAHP synthetase I family YPSIP31758_RS11630 PF13369 Transglutaminase-like superfamily YPSIP31758_RS11635 PF04247 Invasion gene expression up-regulator, SirB YPSIP31758_RS11640 PF17827 PrmC N-terminal domain YPSIP31758_RS11640 PF13847 Methyltransferase domain YPSIP31758_RS11645 PF00472 RF-1 domain YPSIP31758_RS11645 PF03462 PCRF domain YPSIP31758_RS11650 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YPSIP31758_RS11650 PF01488 Shikimate / quinate 5-dehydrogenase YPSIP31758_RS11650 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YPSIP31758_RS11655 PF03550 Outer membrane lipoprotein LolB YPSIP31758_RS11660 PF08544 GHMP kinases C terminal YPSIP31758_RS11660 PF00288 GHMP kinases N terminal domain YPSIP31758_RS11670 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YPSIP31758_RS11670 PF14572 Phosphoribosyl synthetase-associated domain YPSIP31758_RS11680 PF10762 Protein of unknown function (DUF2583) YPSIP31758_RS11685 PF01195 Peptidyl-tRNA hydrolase YPSIP31758_RS11690 PF06071 Protein of unknown function (DUF933) YPSIP31758_RS11690 PF01926 50S ribosome-binding GTPase YPSIP31758_RS11725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YPSIP31758_RS11730 PF00072 Response regulator receiver domain YPSIP31758_RS11730 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS11735 PF00672 HAMP domain YPSIP31758_RS11735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS11735 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS11775 PF08242 Methyltransferase domain YPSIP31758_RS11840 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS11845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPSIP31758_RS11845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YPSIP31758_RS11855 PF05962 HutD YPSIP31758_RS11860 PF01979 Amidohydrolase family YPSIP31758_RS11865 PF07702 UTRA domain YPSIP31758_RS11865 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS11870 PF01979 Amidohydrolase family YPSIP31758_RS11880 PF00267 Gram-negative porin YPSIP31758_RS11885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YPSIP31758_RS11890 PF04996 Succinylarginine dihydrolase YPSIP31758_RS11895 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS11900 PF04958 Arginine N-succinyltransferase beta subunit YPSIP31758_RS11905 PF00202 Aminotransferase class-III YPSIP31758_RS11915 PF00155 Aminotransferase class I and II YPSIP31758_RS11915 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS11920 PF00672 HAMP domain YPSIP31758_RS11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS11920 PF07730 Histidine kinase YPSIP31758_RS11920 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YPSIP31758_RS11925 PF01699 Sodium/calcium exchanger protein YPSIP31758_RS11930 PF02562 PhoH-like protein YPSIP31758_RS11945 PF13994 PgaD-like protein YPSIP31758_RS11950 PF00535 Glycosyl transferase family 2 YPSIP31758_RS11955 PF01522 Polysaccharide deacetylase YPSIP31758_RS11955 PF14883 Hypothetical glycosyl hydrolase family 13 YPSIP31758_RS11965 PF00557 Metallopeptidase family M24 YPSIP31758_RS11970 PF03848 Tellurite resistance protein TehB YPSIP31758_RS11970 PF09313 Domain of unknown function (DUF1971) YPSIP31758_RS11980 PF00578 AhpC/TSA family YPSIP31758_RS11985 PF02687 FtsX-like permease family YPSIP31758_RS11985 PF00005 ABC transporter YPSIP31758_RS11985 PF12704 MacB-like periplasmic core domain YPSIP31758_RS11995 PF12704 MacB-like periplasmic core domain YPSIP31758_RS11995 PF02687 FtsX-like permease family YPSIP31758_RS11995 PF00005 ABC transporter YPSIP31758_RS12005 PF10634 Fe2+ transport protein YPSIP31758_RS12010 PF03239 Iron permease FTR1 family YPSIP31758_RS12020 PF04960 Glutaminase YPSIP31758_RS12025 PF00455 DeoR C terminal sensor domain YPSIP31758_RS12025 PF08220 DeoR-like helix-turn-helix domain YPSIP31758_RS12030 PF00324 Amino acid permease YPSIP31758_RS12035 PF00155 Aminotransferase class I and II YPSIP31758_RS12040 PF02508 Rnf-Nqr subunit, membrane protein YPSIP31758_RS12050 PF04909 Amidohydrolase YPSIP31758_RS12055 PF07690 Major Facilitator Superfamily YPSIP31758_RS12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS12070 PF03466 LysR substrate binding domain YPSIP31758_RS12075 PF03328 HpcH/HpaI aldolase/citrate lyase family YPSIP31758_RS12080 PF01575 MaoC like domain YPSIP31758_RS12085 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain YPSIP31758_RS12085 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain YPSIP31758_RS12090 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS12090 PF00072 Response regulator receiver domain YPSIP31758_RS12095 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS12095 PF01627 Hpt domain YPSIP31758_RS12095 PF00989 PAS fold YPSIP31758_RS12095 PF00072 Response regulator receiver domain YPSIP31758_RS12095 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS12095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS12105 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS12105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS12110 PF13953 PapC C-terminal domain YPSIP31758_RS12110 PF13954 PapC N-terminal domain YPSIP31758_RS12110 PF00577 Outer membrane usher protein YPSIP31758_RS12120 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS12120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS12135 PF08402 TOBE domain YPSIP31758_RS12135 PF00005 ABC transporter YPSIP31758_RS12140 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS12155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPSIP31758_RS12155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YPSIP31758_RS12165 PF07702 UTRA domain YPSIP31758_RS12165 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS12240 PF04984 Phage tail sheath protein subtilisin-like domain YPSIP31758_RS12240 PF17482 Phage tail sheath C-terminal domain YPSIP31758_RS12270 PF04606 Ogr/Delta-like zinc finger YPSIP31758_RS12285 PF02413 Caudovirales tail fibre assembly protein, lambda gpK YPSIP31758_RS12290 PF07484 Phage Tail Collar Domain YPSIP31758_RS12410 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) YPSIP31758_RS12420 PF06381 Protein of unknown function (DUF1073) YPSIP31758_RS12430 PF04221 RelB antitoxin YPSIP31758_RS12435 PF05016 ParE toxin of type II toxin-antitoxin system, parDE YPSIP31758_RS12455 PF02195 ParB-like nuclease domain YPSIP31758_RS12475 PF00959 Phage lysozyme YPSIP31758_RS12480 PF04971 Bacteriophage P21 holin S YPSIP31758_RS12495 PF06530 Phage antitermination protein Q YPSIP31758_RS12500 PF07102 Protein of unknown function (DUF1364) YPSIP31758_RS12560 PF01381 Helix-turn-helix YPSIP31758_RS12560 PF00717 Peptidase S24-like YPSIP31758_RS12590 PF01066 CDP-alcohol phosphatidyltransferase YPSIP31758_RS12595 PF02151 UvrB/uvrC motif YPSIP31758_RS12595 PF08459 UvrC Helix-hairpin-helix N-terminal YPSIP31758_RS12595 PF01541 GIY-YIG catalytic domain YPSIP31758_RS12600 PF00072 Response regulator receiver domain YPSIP31758_RS12600 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS12605 PF10769 Protein of unknown function (DUF2594) YPSIP31758_RS12610 PF06942 GlpM protein YPSIP31758_RS12620 PF13505 Outer membrane protein beta-barrel domain YPSIP31758_RS12630 PF00324 Amino acid permease YPSIP31758_RS12635 PF01344 Kelch motif YPSIP31758_RS12640 PF03358 NADPH-dependent FMN reductase YPSIP31758_RS12645 PF04261 Dyp-type peroxidase family YPSIP31758_RS12650 PF09375 Imelysin YPSIP31758_RS12650 PF13473 Cupredoxin-like domain YPSIP31758_RS12655 PF03239 Iron permease FTR1 family YPSIP31758_RS12660 PF00474 Sodium:solute symporter family YPSIP31758_RS12670 PF14850 DNA-binding domain of Proline dehydrogenase YPSIP31758_RS12670 PF01619 Proline dehydrogenase YPSIP31758_RS12670 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS12670 PF18327 Proline utilization A proline dehydrogenase N-terminal domain YPSIP31758_RS12685 PF00005 ABC transporter YPSIP31758_RS12690 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS12695 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS12700 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS12705 PF02899 Phage integrase, N-terminal SAM-like domain YPSIP31758_RS12710 PF04542 Sigma-70 region 2 YPSIP31758_RS12710 PF04539 Sigma-70 region 3 YPSIP31758_RS12710 PF04545 Sigma-70, region 4 YPSIP31758_RS12715 PF08884 Flagellin D3 domain YPSIP31758_RS12715 PF00669 Bacterial flagellin N-terminal helical region YPSIP31758_RS12715 PF00700 Bacterial flagellin C-terminal helical region YPSIP31758_RS12720 PF07195 Flagellar hook-associated protein 2 C-terminus YPSIP31758_RS12720 PF02465 Flagellar hook-associated protein 2 N-terminus YPSIP31758_RS12720 PF07196 Flagellin hook IN motif YPSIP31758_RS12725 PF02561 Flagellar protein FliS YPSIP31758_RS12730 PF05400 Flagellar protein FliT YPSIP31758_RS12740 PF12833 Helix-turn-helix domain YPSIP31758_RS12745 PF01966 HD domain YPSIP31758_RS12750 PF00730 HhH-GPD superfamily base excision DNA repair protein YPSIP31758_RS12765 PF02049 Flagellar hook-basal body complex protein FliE YPSIP31758_RS12770 PF08345 Flagellar M-ring protein C-terminal YPSIP31758_RS12770 PF01514 Secretory protein of YscJ/FliF family YPSIP31758_RS12775 PF01706 FliG C-terminal domain YPSIP31758_RS12775 PF14842 FliG N-terminal domain YPSIP31758_RS12775 PF14841 FliG middle domain YPSIP31758_RS12780 PF02108 Flagellar assembly protein FliH YPSIP31758_RS12785 PF18269 T3SS EscN ATPase C-terminal domain YPSIP31758_RS12785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPSIP31758_RS12790 PF02050 Flagellar FliJ protein YPSIP31758_RS12795 PF02120 Flagellar hook-length control protein FliK YPSIP31758_RS12800 PF03748 Flagellar basal body-associated protein FliL YPSIP31758_RS12805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YPSIP31758_RS12805 PF02154 Flagellar motor switch protein FliM YPSIP31758_RS12810 PF16973 Flagellar motor switch protein FliN N-terminal YPSIP31758_RS12810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YPSIP31758_RS12815 PF04347 Flagellar biosynthesis protein, FliO YPSIP31758_RS12820 PF00813 FliP family YPSIP31758_RS12825 PF01313 Bacterial export proteins, family 3 YPSIP31758_RS12830 PF01311 Bacterial export proteins, family 1 YPSIP31758_RS12845 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS12850 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS12855 PF00005 ABC transporter YPSIP31758_RS12860 PF13407 Periplasmic binding protein domain YPSIP31758_RS12865 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS12870 PF00596 Class II Aldolase and Adducin N-terminal domain YPSIP31758_RS12875 PF04198 Putative sugar-binding domain YPSIP31758_RS12880 PF00669 Bacterial flagellin N-terminal helical region YPSIP31758_RS12885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS12885 PF00460 Flagella basal body rod protein YPSIP31758_RS12890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YPSIP31758_RS12890 PF10135 Rod binding protein YPSIP31758_RS12895 PF02119 Flagellar P-ring protein YPSIP31758_RS12900 PF02107 Flagellar L-ring protein YPSIP31758_RS12905 PF00460 Flagella basal body rod protein YPSIP31758_RS12905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS12910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS12910 PF00460 Flagella basal body rod protein YPSIP31758_RS12915 PF07559 Flagellar basal body protein FlaE YPSIP31758_RS12915 PF00460 Flagella basal body rod protein YPSIP31758_RS12915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS12920 PF03963 Flagellar hook capping protein - N-terminal region YPSIP31758_RS12920 PF13860 FlgD Ig-like domain YPSIP31758_RS12920 PF13861 FlgD Tudor-like domain YPSIP31758_RS12925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPSIP31758_RS12925 PF00460 Flagella basal body rod protein YPSIP31758_RS12930 PF00460 Flagella basal body rod protein YPSIP31758_RS12935 PF13144 Chaperone for flagella basal body P-ring formation YPSIP31758_RS12935 PF17656 FlgA N-terminal domain YPSIP31758_RS12940 PF04316 Anti-sigma-28 factor, FlgM YPSIP31758_RS12945 PF05130 FlgN protein YPSIP31758_RS12950 PF02369 Bacterial Ig-like domain (group 1) YPSIP31758_RS12950 PF11924 Inverse autotransporter, beta-domain YPSIP31758_RS12950 PF07979 Intimin C-type lectin domain YPSIP31758_RS12950 PF09134 Invasin, domain 3 YPSIP31758_RS12955 PF09134 Invasin, domain 3 YPSIP31758_RS12955 PF11924 Inverse autotransporter, beta-domain YPSIP31758_RS12955 PF07979 Intimin C-type lectin domain YPSIP31758_RS12955 PF02369 Bacterial Ig-like domain (group 1) YPSIP31758_RS12960 PF06366 Flagellar protein FlhE YPSIP31758_RS12965 PF00771 FHIPEP family YPSIP31758_RS12970 PF01312 FlhB HrpN YscU SpaS Family YPSIP31758_RS12990 PF10709 Protein of unknown function (DUF2511) YPSIP31758_RS13000 PF04234 CopC domain YPSIP31758_RS13005 PF00210 Ferritin-like domain YPSIP31758_RS13010 PF06440 DNA polymerase III, theta subunit YPSIP31758_RS13015 PF00561 alpha/beta hydrolase fold YPSIP31758_RS13020 PF00326 Prolyl oligopeptidase family YPSIP31758_RS13020 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YPSIP31758_RS13025 PF13995 YebF-like protein YPSIP31758_RS13030 PF04266 ASCH domain YPSIP31758_RS13035 PF07130 YebG protein YPSIP31758_RS13040 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS13040 PF00270 DEAD/DEAH box helicase YPSIP31758_RS13040 PF03880 DbpA RNA binding domain YPSIP31758_RS13045 PF02222 ATP-grasp domain YPSIP31758_RS13050 PF03701 Uncharacterised protein family (UPF0181) YPSIP31758_RS13055 PF04715 Anthranilate synthase component I, N terminal region YPSIP31758_RS13055 PF00425 chorismate binding enzyme YPSIP31758_RS13060 PF00293 NUDIX domain YPSIP31758_RS13065 PF03315 Serine dehydratase beta chain YPSIP31758_RS13065 PF03313 Serine dehydratase alpha chain YPSIP31758_RS13070 PF01613 Flavin reductase like domain YPSIP31758_RS13075 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal YPSIP31758_RS13075 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal YPSIP31758_RS13080 PF07690 Major Facilitator Superfamily YPSIP31758_RS13085 PF03328 HpcH/HpaI aldolase/citrate lyase family YPSIP31758_RS13090 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPSIP31758_RS13095 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase YPSIP31758_RS13100 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YPSIP31758_RS13105 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS13110 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPSIP31758_RS13115 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPSIP31758_RS13120 PF01047 MarR family YPSIP31758_RS13125 PF03471 Transporter associated domain YPSIP31758_RS13125 PF03741 Integral membrane protein TerC family YPSIP31758_RS13130 PF03830 PTS system sorbose subfamily IIB component YPSIP31758_RS13130 PF03610 PTS system fructose IIA component YPSIP31758_RS13135 PF03609 PTS system sorbose-specific iic component YPSIP31758_RS13140 PF03613 PTS system mannose/fructose/sorbose family IID component YPSIP31758_RS13145 PF06173 Protein of unknown function (DUF986) YPSIP31758_RS13150 PF02659 Putative manganese efflux pump YPSIP31758_RS13155 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS13155 PF00593 TonB dependent receptor YPSIP31758_RS13160 PF08447 PAS fold YPSIP31758_RS13160 PF08448 PAS fold YPSIP31758_RS13160 PF00990 Diguanylate cyclase, GGDEF domain YPSIP31758_RS13160 PF00563 EAL domain YPSIP31758_RS13160 PF05231 MASE1 YPSIP31758_RS13160 PF13426 PAS domain YPSIP31758_RS13170 PF13847 Methyltransferase domain YPSIP31758_RS13175 PF02578 Multi-copper polyphenol oxidoreductase laccase YPSIP31758_RS13180 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS13185 PF10736 Protein of unknown function (DUF2627) YPSIP31758_RS13195 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP YPSIP31758_RS13200 PF00324 Amino acid permease YPSIP31758_RS13215 PF13974 YebO-like protein YPSIP31758_RS13220 PF13996 YobH-like protein YPSIP31758_RS13225 PF10964 Protein of unknown function (DUF2766) YPSIP31758_RS13235 PF12833 Helix-turn-helix domain YPSIP31758_RS13245 PF00664 ABC transporter transmembrane region YPSIP31758_RS13245 PF00005 ABC transporter YPSIP31758_RS13265 PF06167 Glucose-regulated metallo-peptidase M90 YPSIP31758_RS13275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPSIP31758_RS13275 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS13280 PF01306 LacY proton/sugar symporter YPSIP31758_RS13285 PF16875 Glycosyl hydrolase family 36 N-terminal domain YPSIP31758_RS13285 PF16874 Glycosyl hydrolase family 36 C-terminal domain YPSIP31758_RS13295 PF17837 4'-phosphopantetheinyl transferase N-terminal domain YPSIP31758_RS13295 PF01648 4'-phosphopantetheinyl transferase superfamily YPSIP31758_RS13300 PF03480 Bacterial extracellular solute-binding protein, family 7 YPSIP31758_RS13310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YPSIP31758_RS13315 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS13315 PF00072 Response regulator receiver domain YPSIP31758_RS13325 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) YPSIP31758_RS13335 PF01522 Polysaccharide deacetylase YPSIP31758_RS13345 PF01554 MatE YPSIP31758_RS13350 PF00764 Arginosuccinate synthase YPSIP31758_RS13355 PF01070 FMN-dependent dehydrogenase YPSIP31758_RS13360 PF13378 Enolase C-terminal domain-like YPSIP31758_RS13360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YPSIP31758_RS13365 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPSIP31758_RS13375 PF04134 Protein of unknown function, DUF393 YPSIP31758_RS13380 PF07690 Major Facilitator Superfamily YPSIP31758_RS13385 PF09134 Invasin, domain 3 YPSIP31758_RS13385 PF11924 Inverse autotransporter, beta-domain YPSIP31758_RS13385 PF02369 Bacterial Ig-like domain (group 1) YPSIP31758_RS13390 PF04363 Protein of unknown function (DUF496) YPSIP31758_RS13400 PF00929 Exonuclease YPSIP31758_RS13400 PF08411 Exonuclease C-terminal YPSIP31758_RS13405 PF13520 Amino acid permease YPSIP31758_RS13415 PF00465 Iron-containing alcohol dehydrogenase YPSIP31758_RS13420 PF00005 ABC transporter YPSIP31758_RS13425 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS13440 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS13445 PF01634 ATP phosphoribosyltransferase YPSIP31758_RS13445 PF08029 HisG, C-terminal domain YPSIP31758_RS13450 PF00815 Histidinol dehydrogenase YPSIP31758_RS13455 PF00155 Aminotransferase class I and II YPSIP31758_RS13460 PF00475 Imidazoleglycerol-phosphate dehydratase YPSIP31758_RS13465 PF00117 Glutamine amidotransferase class-I YPSIP31758_RS13470 PF00977 Histidine biosynthesis protein YPSIP31758_RS13475 PF00977 Histidine biosynthesis protein YPSIP31758_RS13480 PF01502 Phosphoribosyl-AMP cyclohydrolase YPSIP31758_RS13480 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YPSIP31758_RS13485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YPSIP31758_RS13485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YPSIP31758_RS13490 PF00483 Nucleotidyl transferase YPSIP31758_RS13495 PF00483 Nucleotidyl transferase YPSIP31758_RS13500 PF04183 IucA / IucC family YPSIP31758_RS13500 PF06276 Ferric iron reductase FhuF-like transporter YPSIP31758_RS13505 PF00593 TonB dependent receptor YPSIP31758_RS13505 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS13505 PF07660 Secretin and TonB N terminus short domain YPSIP31758_RS13510 PF01497 Periplasmic binding protein YPSIP31758_RS13515 PF01032 FecCD transport family YPSIP31758_RS13520 PF01032 FecCD transport family YPSIP31758_RS13525 PF00005 ABC transporter YPSIP31758_RS13530 PF06276 Ferric iron reductase FhuF-like transporter YPSIP31758_RS13530 PF04183 IucA / IucC family YPSIP31758_RS13540 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YPSIP31758_RS13545 PF00282 Pyridoxal-dependent decarboxylase conserved domain YPSIP31758_RS13550 PF06276 Ferric iron reductase FhuF-like transporter YPSIP31758_RS13550 PF11575 FhuF 2Fe-2S C-terminal domain YPSIP31758_RS13555 PF03741 Integral membrane protein TerC family YPSIP31758_RS13555 PF03471 Transporter associated domain YPSIP31758_RS13555 PF00571 CBS domain YPSIP31758_RS13560 PF05170 AsmA family YPSIP31758_RS13565 PF00692 dUTPase YPSIP31758_RS13570 PF00485 Phosphoribulokinase / Uridine kinase family YPSIP31758_RS13575 PF10609 NUBPL iron-transfer P-loop NTPase YPSIP31758_RS13580 PF01588 Putative tRNA binding domain YPSIP31758_RS13580 PF09334 tRNA synthetases class I (M) YPSIP31758_RS13600 PF07690 Major Facilitator Superfamily YPSIP31758_RS13605 PF03788 LrgA family YPSIP31758_RS13610 PF04172 LrgB-like family YPSIP31758_RS13615 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region YPSIP31758_RS13615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YPSIP31758_RS13620 PF00390 Malic enzyme, N-terminal domain YPSIP31758_RS13620 PF03949 Malic enzyme, NAD binding domain YPSIP31758_RS13625 PF02698 DUF218 domain YPSIP31758_RS13630 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS13635 PF00005 ABC transporter YPSIP31758_RS13640 PF13407 Periplasmic binding protein domain YPSIP31758_RS13645 PF04235 Protein of unknown function (DUF418) YPSIP31758_RS13650 PF01227 GTP cyclohydrolase I YPSIP31758_RS13655 PF06779 Uncharacterised MFS-type transporter YbfB YPSIP31758_RS13660 PF03466 LysR substrate binding domain YPSIP31758_RS13660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS13665 PF08240 Alcohol dehydrogenase GroES-like domain YPSIP31758_RS13665 PF00107 Zinc-binding dehydrogenase YPSIP31758_RS13670 PF00756 Putative esterase YPSIP31758_RS13685 PF13533 Biotin-lipoyl like YPSIP31758_RS13690 PF00005 ABC transporter YPSIP31758_RS13700 PF00994 Probable molybdopterin binding domain YPSIP31758_RS13700 PF03454 MoeA C-terminal region (domain IV) YPSIP31758_RS13700 PF03453 MoeA N-terminal region (domain I and II) YPSIP31758_RS13705 PF00899 ThiF family YPSIP31758_RS13715 PF00005 ABC transporter YPSIP31758_RS13715 PF12848 ABC transporter YPSIP31758_RS13785 PF13358 DDE superfamily endonuclease YPSIP31758_RS13785 PF13592 Winged helix-turn helix YPSIP31758_RS13815 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) YPSIP31758_RS13815 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS13815 PF13296 Putative type VI secretion system Rhs element Vgr YPSIP31758_RS13820 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS13820 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS13820 PF17871 AAA lid domain YPSIP31758_RS13820 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS13830 PF00691 OmpA family YPSIP31758_RS13830 PF05736 OprF membrane domain YPSIP31758_RS13845 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPSIP31758_RS13860 PF00698 Acyl transferase domain YPSIP31758_RS13865 PF00550 Phosphopantetheine attachment site YPSIP31758_RS13880 PF00378 Enoyl-CoA hydratase/isomerase YPSIP31758_RS13890 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal YPSIP31758_RS13890 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal YPSIP31758_RS13900 PF02801 Beta-ketoacyl synthase, C-terminal domain YPSIP31758_RS13900 PF00109 Beta-ketoacyl synthase, N-terminal domain YPSIP31758_RS13905 PF07977 FabA-like domain YPSIP31758_RS13940 PF13610 DDE domain YPSIP31758_RS13950 PF04358 DsrC like protein YPSIP31758_RS13955 PF00708 Acylphosphatase YPSIP31758_RS13960 PF17785 PUA-like domain YPSIP31758_RS13960 PF10672 S-adenosylmethionine-dependent methyltransferase YPSIP31758_RS13965 PF08755 Hemimethylated DNA-binding protein YccV like YPSIP31758_RS13970 PF13380 CoA binding domain YPSIP31758_RS13975 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) YPSIP31758_RS13980 PF02142 MGS-like domain YPSIP31758_RS13985 PF13361 UvrD-like helicase C-terminal domain YPSIP31758_RS13985 PF00580 UvrD/REP helicase N-terminal domain YPSIP31758_RS13985 PF12462 DNA helicase IV / RNA helicase N terminal YPSIP31758_RS13990 PF03733 Inner membrane component domain YPSIP31758_RS13995 PF12805 FUSC-like inner membrane protein yccS YPSIP31758_RS14000 PF04993 TfoX N-terminal domain YPSIP31758_RS14000 PF04994 TfoX C-terminal domain YPSIP31758_RS14005 PF03846 Cell division inhibitor SulA YPSIP31758_RS14015 PF01389 OmpA-like transmembrane domain YPSIP31758_RS14015 PF00691 OmpA family YPSIP31758_RS14025 PF01797 Transposase IS200 like YPSIP31758_RS14030 PF17414 MatP C-terminal ribbon-helix-helix domain YPSIP31758_RS14030 PF06303 MatP N-terminal domain YPSIP31758_RS14035 PF05362 Lon protease (S16) C-terminal proteolytic domain YPSIP31758_RS14035 PF13654 AAA domain YPSIP31758_RS14040 PF07977 FabA-like domain YPSIP31758_RS14050 PF00109 Beta-ketoacyl synthase, N-terminal domain YPSIP31758_RS14050 PF02801 Beta-ketoacyl synthase, C-terminal domain YPSIP31758_RS14055 PF04957 Ribosome modulation factor YPSIP31758_RS14065 PF03886 ABC-type transport auxiliary lipoprotein component YPSIP31758_RS14070 PF02470 MlaD protein YPSIP31758_RS14075 PF04403 Paraquat-inducible protein A YPSIP31758_RS14080 PF00005 ABC transporter YPSIP31758_RS14080 PF12848 ABC transporter YPSIP31758_RS14080 PF16326 ABC transporter C-terminal domain YPSIP31758_RS14085 PF01170 Putative RNA methylase family UPF0020 YPSIP31758_RS14085 PF10672 S-adenosylmethionine-dependent methyltransferase YPSIP31758_RS14085 PF02926 THUMP domain YPSIP31758_RS14090 PF00111 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS14090 PF03473 MOSC domain YPSIP31758_RS14090 PF03476 MOSC N-terminal beta barrel domain YPSIP31758_RS14095 PF07126 Cell-division protein ZapC YPSIP31758_RS14100 PF01180 Dihydroorotate dehydrogenase YPSIP31758_RS14105 PF11940 Domain of unknown function (DUF3458) Ig-like fold YPSIP31758_RS14105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats YPSIP31758_RS14105 PF01433 Peptidase family M1 domain YPSIP31758_RS14110 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family YPSIP31758_RS14110 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain YPSIP31758_RS14115 PF01336 OB-fold nucleic acid binding domain YPSIP31758_RS14115 PF00152 tRNA synthetases class II (D, K and N) YPSIP31758_RS14120 PF00267 Gram-negative porin YPSIP31758_RS14125 PF00155 Aminotransferase class I and II YPSIP31758_RS14130 PF00753 Metallo-beta-lactamase superfamily YPSIP31758_RS14135 PF05951 Bacterial protein of unknown function (DUF882) YPSIP31758_RS14140 PF01471 Putative peptidoglycan binding domain YPSIP31758_RS14140 PF03734 L,D-transpeptidase catalytic domain YPSIP31758_RS14145 PF16330 MukB hinge domain YPSIP31758_RS14145 PF04310 MukB N-terminal YPSIP31758_RS14150 PF04288 MukE-like family YPSIP31758_RS14155 PF17192 MukF middle domain YPSIP31758_RS14155 PF17193 MukF C-terminal domain YPSIP31758_RS14155 PF03882 MukF winged-helix domain YPSIP31758_RS14160 PF13847 Methyltransferase domain YPSIP31758_RS14170 PF01636 Phosphotransferase enzyme family YPSIP31758_RS14175 PF02348 Cytidylyltransferase YPSIP31758_RS14180 PF03966 Trm112p-like protein YPSIP31758_RS14185 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS14195 PF07063 Domain of unknown function (DUF1338) YPSIP31758_RS14200 PF02606 Tetraacyldisaccharide-1-P 4'-kinase YPSIP31758_RS14205 PF00664 ABC transporter transmembrane region YPSIP31758_RS14205 PF00005 ABC transporter YPSIP31758_RS14210 PF03772 Competence protein YPSIP31758_RS14210 PF00753 Metallo-beta-lactamase superfamily YPSIP31758_RS14220 PF00216 Bacterial DNA-binding protein YPSIP31758_RS14225 PF00575 S1 RNA binding domain YPSIP31758_RS14230 PF02224 Cytidylate kinase YPSIP31758_RS14235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YPSIP31758_RS14240 PF00266 Aminotransferase class-V YPSIP31758_RS14255 PF00710 Asparaginase, N-terminal YPSIP31758_RS14255 PF17763 Glutaminase/Asparaginase C-terminal domain YPSIP31758_RS14260 PF18381 YcaO cyclodehydratase C-terminal domain YPSIP31758_RS14260 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding YPSIP31758_RS14265 PF01226 Formate/nitrite transporter YPSIP31758_RS14270 PF02901 Pyruvate formate lyase-like YPSIP31758_RS14270 PF01228 Glycine radical YPSIP31758_RS14280 PF04055 Radical SAM superfamily YPSIP31758_RS14285 PF07690 Major Facilitator Superfamily YPSIP31758_RS14290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YPSIP31758_RS14290 PF02403 Seryl-tRNA synthetase N-terminal domain YPSIP31758_RS14295 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS14295 PF12002 MgsA AAA+ ATPase C terminal YPSIP31758_RS14295 PF16193 AAA C-terminal domain YPSIP31758_RS14300 PF03548 Outer membrane lipoprotein carrier protein LolA YPSIP31758_RS14305 PF01580 FtsK/SpoIIIE family YPSIP31758_RS14305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YPSIP31758_RS14305 PF09397 Ftsk gamma domain YPSIP31758_RS14305 PF17854 FtsK alpha domain YPSIP31758_RS14310 PF01037 Lrp/AsnC ligand binding domain YPSIP31758_RS14315 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS14325 PF00005 ABC transporter YPSIP31758_RS14325 PF00664 ABC transporter transmembrane region YPSIP31758_RS14330 PF00005 ABC transporter YPSIP31758_RS14330 PF00664 ABC transporter transmembrane region YPSIP31758_RS14335 PF03588 Leucyl/phenylalanyl-tRNA protein transferase YPSIP31758_RS14340 PF01176 Translation initiation factor 1A / IF-1 YPSIP31758_RS14345 PF02861 Clp amino terminal domain, pathogenicity island component YPSIP31758_RS14345 PF17871 AAA lid domain YPSIP31758_RS14345 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS14345 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS14345 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS14350 PF02617 ATP-dependent Clp protease adaptor protein ClpS YPSIP31758_RS14355 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS14360 PF00005 ABC transporter YPSIP31758_RS14360 PF02687 FtsX-like permease family YPSIP31758_RS14360 PF12704 MacB-like periplasmic core domain YPSIP31758_RS14365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS14370 PF04393 Protein of unknown function (DUF535) YPSIP31758_RS14375 PF11398 Protein of unknown function (DUF2813) YPSIP31758_RS14380 PF03956 Lysine exporter LysO YPSIP31758_RS14385 PF03063 Prismane/CO dehydrogenase family YPSIP31758_RS14390 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS14390 PF00970 Oxidoreductase FAD-binding domain YPSIP31758_RS14390 PF00111 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS14395 PF00205 Thiamine pyrophosphate enzyme, central domain YPSIP31758_RS14395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPSIP31758_RS14395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPSIP31758_RS14400 PF01212 Beta-eliminating lyase YPSIP31758_RS14405 PF11066 Protein of unknown function (DUF2867) YPSIP31758_RS14405 PF13460 NAD(P)H-binding YPSIP31758_RS14410 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS14415 PF12883 Protein of unknown function (DUF3828) YPSIP31758_RS14420 PF01817 Chorismate mutase type II YPSIP31758_RS14425 PF00005 ABC transporter YPSIP31758_RS14430 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS14435 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS14440 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS14450 PF00892 EamA-like transporter family YPSIP31758_RS14455 PF10100 Staphylopine dehydrogenase YPSIP31758_RS14460 PF03059 Nicotianamine synthase protein YPSIP31758_RS14465 PF00005 ABC transporter YPSIP31758_RS14470 PF01032 FecCD transport family YPSIP31758_RS14490 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS14495 PF05958 tRNA (Uracil-5-)-methyltransferase YPSIP31758_RS14500 PF10767 Protein of unknown function (DUF2593) YPSIP31758_RS14505 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS14510 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS14515 PF00005 ABC transporter YPSIP31758_RS14515 PF08402 TOBE domain YPSIP31758_RS14520 PF13416 Bacterial extracellular solute-binding protein YPSIP31758_RS14525 PF10722 Putative bacterial sensory transduction regulator YPSIP31758_RS14535 PF07214 Protein of unknown function (DUF1418) YPSIP31758_RS14540 PF00462 Glutaredoxin YPSIP31758_RS14545 PF06826 Predicted Permease Membrane Region YPSIP31758_RS14545 PF02080 TrkA-C domain YPSIP31758_RS14555 PF01569 PAP2 superfamily YPSIP31758_RS14560 PF01791 DeoC/LacD family aldolase YPSIP31758_RS14565 PF00455 DeoR C terminal sensor domain YPSIP31758_RS14565 PF08220 DeoR-like helix-turn-helix domain YPSIP31758_RS14580 PF07943 Penicillin-binding protein 5, C-terminal domain YPSIP31758_RS14580 PF00768 D-alanyl-D-alanine carboxypeptidase YPSIP31758_RS14585 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS14590 PF09383 NIL domain YPSIP31758_RS14590 PF00005 ABC transporter YPSIP31758_RS14595 PF03180 NLPA lipoprotein YPSIP31758_RS14610 PF00043 Glutathione S-transferase, C-terminal domain YPSIP31758_RS14610 PF13417 Glutathione S-transferase, N-terminal domain YPSIP31758_RS14615 PF00593 TonB dependent receptor YPSIP31758_RS14615 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS14620 PF00005 ABC transporter YPSIP31758_RS14625 PF01032 FecCD transport family YPSIP31758_RS14635 PF00324 Amino acid permease YPSIP31758_RS14640 PF03466 LysR substrate binding domain YPSIP31758_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS14645 PF03601 Conserved hypothetical protein 698 YPSIP31758_RS14650 PF01261 Xylose isomerase-like TIM barrel YPSIP31758_RS14655 PF00577 Outer membrane usher protein YPSIP31758_RS14655 PF13953 PapC C-terminal domain YPSIP31758_RS14655 PF13954 PapC N-terminal domain YPSIP31758_RS14660 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS14660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS14670 PF17550 Family of unknown function YPSIP31758_RS14675 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS14680 PF02378 Phosphotransferase system, EIIC YPSIP31758_RS14680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPSIP31758_RS14685 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS14690 PF00381 PTS HPr component phosphorylation site YPSIP31758_RS14690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPSIP31758_RS14695 PF13344 Haloacid dehalogenase-like hydrolase YPSIP31758_RS14695 PF00293 NUDIX domain YPSIP31758_RS14700 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS14705 PF00005 ABC transporter YPSIP31758_RS14715 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YPSIP31758_RS14720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS14720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS14725 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS14735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPSIP31758_RS14735 PF01842 ACT domain YPSIP31758_RS14735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPSIP31758_RS14745 PF03692 Putative zinc- or iron-chelating domain YPSIP31758_RS14750 PF03222 Tryptophan/tyrosine permease family YPSIP31758_RS14755 PF01132 Elongation factor P (EF-P) OB domain YPSIP31758_RS14755 PF08207 Elongation factor P (EF-P) KOW-like domain YPSIP31758_RS14755 PF09285 Elongation factor P, C-terminal YPSIP31758_RS14760 PF03786 D-mannonate dehydratase (UxuA) YPSIP31758_RS14765 PF01232 Mannitol dehydrogenase Rossmann domain YPSIP31758_RS14765 PF08125 Mannitol dehydrogenase C-terminal domain YPSIP31758_RS14770 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS14770 PF07729 FCD domain YPSIP31758_RS14780 PF02492 CobW/HypB/UreG, nucleotide-binding domain YPSIP31758_RS14780 PF07683 Cobalamin synthesis protein cobW C-terminal domain YPSIP31758_RS14785 PF01569 PAP2 superfamily YPSIP31758_RS14790 PF00877 NlpC/P60 family YPSIP31758_RS14795 PF12792 CSS motif domain associated with EAL YPSIP31758_RS14795 PF00563 EAL domain YPSIP31758_RS14800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS14805 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS14810 PF12911 N-terminal TM domain of oligopeptide transport permease C YPSIP31758_RS14810 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS14815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS14815 PF00005 ABC transporter YPSIP31758_RS14820 PF13989 YejG-like protein YPSIP31758_RS14825 PF07690 Major Facilitator Superfamily YPSIP31758_RS14830 PF01479 S4 domain YPSIP31758_RS14830 PF00849 RNA pseudouridylate synthase YPSIP31758_RS14835 PF04851 Type III restriction enzyme, res subunit YPSIP31758_RS14835 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS14840 PF01386 Ribosomal L25p family YPSIP31758_RS14845 PF04245 37-kD nucleoid-associated bacterial protein YPSIP31758_RS14850 PF07208 Protein of unknown function (DUF1414) YPSIP31758_RS14855 PF11893 Domain of unknown function (DUF3413) YPSIP31758_RS14855 PF00884 Sulfatase YPSIP31758_RS14870 PF05638 Type VI secretion system effector, Hcp YPSIP31758_RS14890 PF00232 Glycosyl hydrolase family 1 YPSIP31758_RS14895 PF01380 SIS domain YPSIP31758_RS14895 PF01418 Helix-turn-helix domain, rpiR family YPSIP31758_RS14900 PF07484 Phage Tail Collar Domain YPSIP31758_RS14915 PF04865 Baseplate J-like protein YPSIP31758_RS14955 PF17482 Phage tail sheath C-terminal domain YPSIP31758_RS14955 PF04984 Phage tail sheath protein subtilisin-like domain YPSIP31758_RS14975 PF01261 Xylose isomerase-like TIM barrel YPSIP31758_RS14980 PF00455 DeoR C terminal sensor domain YPSIP31758_RS14980 PF08220 DeoR-like helix-turn-helix domain YPSIP31758_RS14985 PF00596 Class II Aldolase and Adducin N-terminal domain YPSIP31758_RS14990 PF07005 Sugar-binding N-terminal domain YPSIP31758_RS14990 PF17042 Nucleotide-binding C-terminal domain YPSIP31758_RS14995 PF06530 Phage antitermination protein Q YPSIP31758_RS15000 PF01381 Helix-turn-helix YPSIP31758_RS15000 PF00717 Peptidase S24-like YPSIP31758_RS15005 PF06183 DinI-like family YPSIP31758_RS15015 PF02743 Cache domain YPSIP31758_RS15015 PF00672 HAMP domain YPSIP31758_RS15015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS15020 PF12706 Beta-lactamase superfamily domain YPSIP31758_RS15035 PF00144 Beta-lactamase YPSIP31758_RS15060 PF00267 Gram-negative porin YPSIP31758_RS15065 PF07690 Major Facilitator Superfamily YPSIP31758_RS15070 PF16359 RcsD-ABL domain YPSIP31758_RS15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS15070 PF01627 Hpt domain YPSIP31758_RS15075 PF00072 Response regulator receiver domain YPSIP31758_RS15075 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS15080 PF00072 Response regulator receiver domain YPSIP31758_RS15080 PF09456 RcsC Alpha-Beta-Loop (ABL) YPSIP31758_RS15080 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS15090 PF03989 DNA gyrase C-terminal domain, beta-propeller YPSIP31758_RS15090 PF00521 DNA gyrase/topoisomerase IV, subunit A YPSIP31758_RS15100 PF02867 Ribonucleotide reductase, barrel domain YPSIP31758_RS15100 PF00317 Ribonucleotide reductase, all-alpha domain YPSIP31758_RS15100 PF03477 ATP cone domain YPSIP31758_RS15105 PF00268 Ribonucleotide reductase, small chain YPSIP31758_RS15110 PF00111 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS15115 PF03974 Ecotin YPSIP31758_RS15120 PF00994 Probable molybdopterin binding domain YPSIP31758_RS15125 PF03222 Tryptophan/tyrosine permease family YPSIP31758_RS15130 PF07437 YfaZ precursor YPSIP31758_RS15135 PF06628 Catalase-related immune-responsive YPSIP31758_RS15135 PF00199 Catalase YPSIP31758_RS15140 PF13307 Helicase C-terminal domain YPSIP31758_RS15140 PF06733 DEAD_2 YPSIP31758_RS15145 PF00267 Gram-negative porin YPSIP31758_RS15155 PF00892 EamA-like transporter family YPSIP31758_RS15165 PF01276 Orn/Lys/Arg decarboxylase, major domain YPSIP31758_RS15165 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YPSIP31758_RS15165 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YPSIP31758_RS15170 PF13520 Amino acid permease YPSIP31758_RS15175 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS15180 PF00005 ABC transporter YPSIP31758_RS15185 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS15190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YPSIP31758_RS15195 PF00581 Rhodanese-like domain YPSIP31758_RS15210 PF00005 ABC transporter YPSIP31758_RS15215 PF00005 ABC transporter YPSIP31758_RS15220 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS15225 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS15230 PF13188 PAS domain YPSIP31758_RS15230 PF00158 Sigma-54 interaction domain YPSIP31758_RS15230 PF02954 Bacterial regulatory protein, Fis family YPSIP31758_RS15235 PF07308 Protein of unknown function (DUF1456) YPSIP31758_RS15240 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS15245 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS15255 PF00005 ABC transporter YPSIP31758_RS15260 PF04226 Transglycosylase associated protein YPSIP31758_RS15270 PF01844 HNH endonuclease YPSIP31758_RS15275 PF01928 CYTH domain YPSIP31758_RS15280 PF01565 FAD binding domain YPSIP31758_RS15280 PF09330 D-lactate dehydrogenase, membrane binding YPSIP31758_RS15285 PF00768 D-alanyl-D-alanine carboxypeptidase YPSIP31758_RS15295 PF01207 Dihydrouridine synthase (Dus) YPSIP31758_RS15310 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS15310 PF00270 DEAD/DEAH box helicase YPSIP31758_RS15315 PF09209 Tetracyclin repressor-like, C-terminal domain YPSIP31758_RS15315 PF00440 Bacterial regulatory proteins, tetR family YPSIP31758_RS15320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS15325 PF00005 ABC transporter YPSIP31758_RS15350 PF03466 LysR substrate binding domain YPSIP31758_RS15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS15355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YPSIP31758_RS15360 PF00072 Response regulator receiver domain YPSIP31758_RS15360 PF02954 Bacterial regulatory protein, Fis family YPSIP31758_RS15360 PF00158 Sigma-54 interaction domain YPSIP31758_RS15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS15365 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS15370 PF13801 Heavy-metal resistance YPSIP31758_RS15375 PF03825 Nucleoside H+ symporter YPSIP31758_RS15380 PF01048 Phosphorylase superfamily YPSIP31758_RS15390 PF03466 LysR substrate binding domain YPSIP31758_RS15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS15395 PF02028 BCCT, betaine/carnitine/choline family transporter YPSIP31758_RS15400 PF13977 BetI-type transcriptional repressor, C-terminal YPSIP31758_RS15400 PF00440 Bacterial regulatory proteins, tetR family YPSIP31758_RS15405 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS15410 PF00732 GMC oxidoreductase YPSIP31758_RS15410 PF05199 GMC oxidoreductase YPSIP31758_RS15415 PF01027 Inhibitor of apoptosis-promoting Bax1 YPSIP31758_RS15420 PF02391 MoaE protein YPSIP31758_RS15425 PF02597 ThiS family YPSIP31758_RS15430 PF01967 MoaC family YPSIP31758_RS15435 PF04055 Radical SAM superfamily YPSIP31758_RS15435 PF06463 Molybdenum Cofactor Synthesis C YPSIP31758_RS15445 PF01933 Uncharacterised protein family UPF0052 YPSIP31758_RS15450 PF09905 DNA-binding protein VF530 YPSIP31758_RS15455 PF12344 Ultra-violet resistance protein B YPSIP31758_RS15455 PF17757 UvrB interaction domain YPSIP31758_RS15455 PF04851 Type III restriction enzyme, res subunit YPSIP31758_RS15455 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS15455 PF02151 UvrB/uvrC motif YPSIP31758_RS15460 PF09383 NIL domain YPSIP31758_RS15460 PF00005 ABC transporter YPSIP31758_RS15470 PF08241 Methyltransferase domain YPSIP31758_RS15475 PF00155 Aminotransferase class I and II YPSIP31758_RS15480 PF04055 Radical SAM superfamily YPSIP31758_RS15480 PF06968 Biotin and Thiamin Synthesis associated domain YPSIP31758_RS15485 PF00202 Aminotransferase class-III YPSIP31758_RS15490 PF10282 Lactonase, 7-bladed beta-propeller YPSIP31758_RS15500 PF03459 TOBE domain YPSIP31758_RS15500 PF00005 ABC transporter YPSIP31758_RS15505 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS15515 PF10766 Multidrug efflux pump-associated protein AcrZ YPSIP31758_RS15520 PF03459 TOBE domain YPSIP31758_RS15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS15525 PF00005 ABC transporter YPSIP31758_RS15540 PF16363 GDP-mannose 4,6 dehydratase YPSIP31758_RS15545 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain YPSIP31758_RS15545 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain YPSIP31758_RS15550 PF08544 GHMP kinases C terminal YPSIP31758_RS15550 PF00288 GHMP kinases N terminal domain YPSIP31758_RS15550 PF10509 Galactokinase galactose-binding signature YPSIP31758_RS15555 PF01263 Aldose 1-epimerase YPSIP31758_RS15565 PF00300 Histidine phosphatase superfamily (branch 1) YPSIP31758_RS15570 PF00793 DAHP synthetase I family YPSIP31758_RS15575 PF01545 Cation efflux family YPSIP31758_RS15580 PF04973 Nicotinamide mononucleotide transporter YPSIP31758_RS15585 PF02445 Quinolinate synthetase A protein YPSIP31758_RS15625 PF13174 Tetratricopeptide repeat YPSIP31758_RS15625 PF16331 TolA binding protein trimerisation YPSIP31758_RS15630 PF00691 OmpA family YPSIP31758_RS15635 PF07676 WD40-like Beta Propeller Repeat YPSIP31758_RS15635 PF04052 TolB amino-terminal domain YPSIP31758_RS15640 PF06519 TolA C-terminal YPSIP31758_RS15640 PF06519 TolA C-terminal YPSIP31758_RS15645 PF02472 Biopolymer transport protein ExbD/TolR YPSIP31758_RS15650 PF01618 MotA/TolQ/ExbB proton channel family YPSIP31758_RS15655 PF03061 Thioesterase superfamily YPSIP31758_RS15660 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) YPSIP31758_RS15665 PF08173 Membrane bound YbgT-like protein YPSIP31758_RS15670 PF02322 Cytochrome bd terminal oxidase subunit II YPSIP31758_RS15675 PF01654 Cytochrome bd terminal oxidase subunit I YPSIP31758_RS15680 PF01797 Transposase IS200 like YPSIP31758_RS15685 PF02629 CoA binding domain YPSIP31758_RS15685 PF00549 CoA-ligase YPSIP31758_RS15690 PF08442 ATP-grasp domain YPSIP31758_RS15690 PF00549 CoA-ligase YPSIP31758_RS15695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YPSIP31758_RS15695 PF00364 Biotin-requiring enzyme YPSIP31758_RS15695 PF02817 e3 binding domain YPSIP31758_RS15700 PF16078 2-oxoglutarate dehydrogenase N-terminus YPSIP31758_RS15700 PF16870 2-oxoglutarate dehydrogenase C-terminal YPSIP31758_RS15700 PF02779 Transketolase, pyrimidine binding domain YPSIP31758_RS15700 PF00676 Dehydrogenase E1 component YPSIP31758_RS15705 PF13085 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS15710 PF00890 FAD binding domain YPSIP31758_RS15710 PF02910 Fumarate reductase flavoprotein C-term YPSIP31758_RS15715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YPSIP31758_RS15720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YPSIP31758_RS15725 PF00285 Citrate synthase, C-terminal domain YPSIP31758_RS15730 PF01025 GrpE YPSIP31758_RS15735 PF01513 ATP-NAD kinase YPSIP31758_RS15740 PF02463 RecF/RecN/SMC N terminal domain YPSIP31758_RS15745 PF04355 SmpA / OmlA family YPSIP31758_RS15750 PF03658 RnfH family Ubiquitin YPSIP31758_RS15755 PF03364 Polyketide cyclase / dehydrase and lipid transport YPSIP31758_RS15760 PF01668 SmpB protein YPSIP31758_RS15765 PF00589 Phage integrase family YPSIP31758_RS15765 PF13356 Arm DNA-binding domain YPSIP31758_RS15770 PF01527 Transposase YPSIP31758_RS15775 PF00589 Phage integrase family YPSIP31758_RS15775 PF13356 Arm DNA-binding domain YPSIP31758_RS15785 PF12697 Alpha/beta hydrolase family YPSIP31758_RS15795 PF01402 Ribbon-helix-helix protein, copG family YPSIP31758_RS15805 PF00258 Flavodoxin YPSIP31758_RS15810 PF01475 Ferric uptake regulator family YPSIP31758_RS15815 PF03173 Putative carbohydrate binding domain YPSIP31758_RS15815 PF00728 Glycosyl hydrolase family 20, catalytic domain YPSIP31758_RS15815 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain YPSIP31758_RS15815 PF02838 Glycosyl hydrolase family 20, domain 2 YPSIP31758_RS15820 PF03573 outer membrane porin, OprD family YPSIP31758_RS15825 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain YPSIP31758_RS15825 PF00749 tRNA synthetases class I (E and Q), catalytic domain YPSIP31758_RS15830 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YPSIP31758_RS15830 PF02378 Phosphotransferase system, EIIC YPSIP31758_RS15830 PF00367 phosphotransferase system, EIIB YPSIP31758_RS15835 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YPSIP31758_RS15840 PF01979 Amidohydrolase family YPSIP31758_RS15845 PF01047 MarR family YPSIP31758_RS15845 PF00480 ROK family YPSIP31758_RS15850 PF13344 Haloacid dehalogenase-like hydrolase YPSIP31758_RS15855 PF00733 Asparagine synthase YPSIP31758_RS15855 PF13537 Glutamine amidotransferase domain YPSIP31758_RS15895 PF01494 FAD binding domain YPSIP31758_RS15900 PF01938 TRAM domain YPSIP31758_RS15900 PF04055 Radical SAM superfamily YPSIP31758_RS15900 PF00919 Uncharacterized protein family UPF0004 YPSIP31758_RS15905 PF02562 PhoH-like protein YPSIP31758_RS15910 PF02130 Uncharacterized protein family UPF0054 YPSIP31758_RS15915 PF00571 CBS domain YPSIP31758_RS15915 PF03471 Transporter associated domain YPSIP31758_RS15920 PF00795 Carbon-nitrogen hydrolase YPSIP31758_RS15925 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS15930 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS15935 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS15940 PF00005 ABC transporter YPSIP31758_RS15945 PF07295 Zinc-ribbon containing domain YPSIP31758_RS15950 PF08264 Anticodon-binding domain of tRNA YPSIP31758_RS15950 PF13603 Leucyl-tRNA synthetase, Domain 2 YPSIP31758_RS15950 PF00133 tRNA synthetases class I (I, L, M and V) YPSIP31758_RS15955 PF04390 Lipopolysaccharide-assembly YPSIP31758_RS15960 PF06144 DNA polymerase III, delta subunit YPSIP31758_RS15960 PF14840 Processivity clamp loader gamma complex DNA pol III C-term YPSIP31758_RS15965 PF01467 Cytidylyltransferase-like YPSIP31758_RS16060 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain YPSIP31758_RS16060 PF00589 Phage integrase family YPSIP31758_RS16070 PF02590 Predicted SPOUT methyltransferase YPSIP31758_RS16075 PF03717 Penicillin-binding Protein dimerisation domain YPSIP31758_RS16075 PF00905 Penicillin binding protein transpeptidase domain YPSIP31758_RS16080 PF01098 Cell cycle protein YPSIP31758_RS16085 PF05036 Sporulation related domain YPSIP31758_RS16085 PF03330 Lytic transglycolase YPSIP31758_RS16090 PF00768 D-alanyl-D-alanine carboxypeptidase YPSIP31758_RS16090 PF07943 Penicillin-binding protein 5, C-terminal domain YPSIP31758_RS16095 PF04359 Protein of unknown function (DUF493) YPSIP31758_RS16100 PF03099 Biotin/lipoate A/B protein ligase family YPSIP31758_RS16105 PF04055 Radical SAM superfamily YPSIP31758_RS16105 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YPSIP31758_RS16110 PF02416 mttA/Hcf106 family YPSIP31758_RS16120 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YPSIP31758_RS16125 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS16130 PF00313 'Cold-shock' DNA-binding domain YPSIP31758_RS16135 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS16160 PF00005 ABC transporter YPSIP31758_RS16160 PF00664 ABC transporter transmembrane region YPSIP31758_RS16170 PF04962 KduI/IolB family YPSIP31758_RS16175 PF01261 Xylose isomerase-like TIM barrel YPSIP31758_RS16180 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS16185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YPSIP31758_RS16185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPSIP31758_RS16190 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS16195 PF00005 ABC transporter YPSIP31758_RS16200 PF13407 Periplasmic binding protein domain YPSIP31758_RS16205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPSIP31758_RS16205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YPSIP31758_RS16210 PF00205 Thiamine pyrophosphate enzyme, central domain YPSIP31758_RS16210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPSIP31758_RS16210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPSIP31758_RS16215 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS16225 PF07703 Alpha-2-macroglobulin bait region domain YPSIP31758_RS16225 PF17962 Bacterial macroglobulin domain 6 YPSIP31758_RS16225 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain YPSIP31758_RS16225 PF11974 Bacterial alpha-2-macroglobulin MG3 domain YPSIP31758_RS16225 PF00207 Alpha-2-macroglobulin family YPSIP31758_RS16225 PF01835 MG2 domain YPSIP31758_RS16225 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain YPSIP31758_RS16230 PF00912 Transglycosylase YPSIP31758_RS16230 PF06832 Penicillin-Binding Protein C-terminus Family YPSIP31758_RS16230 PF00905 Penicillin binding protein transpeptidase domain YPSIP31758_RS16235 PF13693 Winged helix-turn-helix DNA-binding YPSIP31758_RS16250 PF05638 Type VI secretion system effector, Hcp YPSIP31758_RS16265 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS16265 PF16168 Adhesin of bacterial autotransporter system, probable stalk YPSIP31758_RS16265 PF03212 Pertactin YPSIP31758_RS16265 PF03797 Autotransporter beta-domain YPSIP31758_RS16275 PF08007 Cupin superfamily protein YPSIP31758_RS16280 PF01479 S4 domain YPSIP31758_RS16280 PF00849 RNA pseudouridylate synthase YPSIP31758_RS16295 PF14310 Fibronectin type III-like domain YPSIP31758_RS16295 PF01915 Glycosyl hydrolase family 3 C-terminal domain YPSIP31758_RS16295 PF00933 Glycosyl hydrolase family 3 N terminal domain YPSIP31758_RS16315 PF00248 Aldo/keto reductase family YPSIP31758_RS16320 PF00248 Aldo/keto reductase family YPSIP31758_RS16325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS16325 PF03466 LysR substrate binding domain YPSIP31758_RS16345 PF00782 Dual specificity phosphatase, catalytic domain YPSIP31758_RS16350 PF12147 Putative methyltransferase YPSIP31758_RS16350 PF12146 Serine aminopeptidase, S33 YPSIP31758_RS16355 PF01553 Acyltransferase YPSIP31758_RS16365 PF01066 CDP-alcohol phosphatidyltransferase YPSIP31758_RS16405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPSIP31758_RS16405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPSIP31758_RS16415 PF01406 tRNA synthetases class I (C) catalytic domain YPSIP31758_RS16415 PF09190 DALR domain YPSIP31758_RS16420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YPSIP31758_RS16425 PF00149 Calcineurin-like phosphoesterase YPSIP31758_RS16430 PF00731 AIR carboxylase YPSIP31758_RS16435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YPSIP31758_RS16435 PF02222 ATP-grasp domain YPSIP31758_RS16445 PF00005 ABC transporter YPSIP31758_RS16450 PF13472 GDSL-like Lipase/Acylhydrolase family YPSIP31758_RS16455 PF00106 short chain dehydrogenase YPSIP31758_RS16460 PF00085 Thioredoxin YPSIP31758_RS16465 PF16200 C-terminal region of band_7 YPSIP31758_RS16465 PF01145 SPFH domain / Band 7 family YPSIP31758_RS16470 PF01957 NfeD-like C-terminal, partner-binding YPSIP31758_RS16475 PF13411 MerR HTH family regulatory protein YPSIP31758_RS16480 PF00403 Heavy-metal-associated domain YPSIP31758_RS16485 PF01963 TraB family YPSIP31758_RS16490 PF04073 Aminoacyl-tRNA editing domain YPSIP31758_RS16505 PF02872 5'-nucleotidase, C-terminal domain YPSIP31758_RS16505 PF00149 Calcineurin-like phosphoesterase YPSIP31758_RS16510 PF07690 Major Facilitator Superfamily YPSIP31758_RS16515 PF02254 TrkA-N domain YPSIP31758_RS16515 PF00999 Sodium/hydrogen exchanger family YPSIP31758_RS16520 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS16525 PF02706 Chain length determinant protein YPSIP31758_RS16530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPSIP31758_RS16530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPSIP31758_RS16530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPSIP31758_RS16530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPSIP31758_RS16535 PF00535 Glycosyl transferase family 2 YPSIP31758_RS16540 PF00483 Nucleotidyl transferase YPSIP31758_RS16540 PF01050 Mannose-6-phosphate isomerase YPSIP31758_RS16545 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS16550 PF16363 GDP-mannose 4,6 dehydratase YPSIP31758_RS16555 PF00534 Glycosyl transferases group 1 YPSIP31758_RS16555 PF13439 Glycosyltransferase Family 4 YPSIP31758_RS16590 PF01370 NAD dependent epimerase/dehydratase family YPSIP31758_RS16595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YPSIP31758_RS16600 PF16363 GDP-mannose 4,6 dehydratase YPSIP31758_RS16605 PF00483 Nucleotidyl transferase YPSIP31758_RS16610 PF00111 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS16610 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS16610 PF00970 Oxidoreductase FAD-binding domain YPSIP31758_RS16615 PF00762 Ferrochelatase YPSIP31758_RS16620 PF05191 Adenylate kinase, active site lid YPSIP31758_RS16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS16625 PF00183 Hsp90 protein YPSIP31758_RS16630 PF13662 Toprim domain YPSIP31758_RS16630 PF02132 RecR protein YPSIP31758_RS16635 PF02575 YbaB/EbfC DNA-binding family YPSIP31758_RS16640 PF12170 DNA polymerase III tau subunit V interacting with alpha YPSIP31758_RS16640 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding YPSIP31758_RS16640 PF12169 DNA polymerase III subunits gamma and tau domain III YPSIP31758_RS16645 PF00156 Phosphoribosyl transferase domain YPSIP31758_RS16660 PF10689 Protein of unknown function (DUF2496) YPSIP31758_RS16665 PF00924 Mechanosensitive ion channel YPSIP31758_RS16665 PF12794 Mechanosensitive ion channel inner membrane domain 1 YPSIP31758_RS16665 PF12795 Mechanosensitive ion channel porin domain YPSIP31758_RS16670 PF02635 DsrE/DsrF-like family YPSIP31758_RS16675 PF00440 Bacterial regulatory proteins, tetR family YPSIP31758_RS16675 PF08361 MAATS-type transcriptional repressor, C-terminal region YPSIP31758_RS16680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS16680 PF00529 HlyD membrane-fusion protein of T1SS YPSIP31758_RS16685 PF00873 AcrB/AcrD/AcrF family YPSIP31758_RS16690 PF01197 Ribosomal protein L31 YPSIP31758_RS16695 PF00444 Ribosomal protein L36 YPSIP31758_RS16705 PF10757 Biofilm formation regulator YbaJ YPSIP31758_RS16710 PF05321 Haemolysin expression modulating protein YPSIP31758_RS16715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YPSIP31758_RS16720 PF09619 Type III secretion system lipoprotein chaperone (YscW) YPSIP31758_RS16730 PF00909 Ammonium Transporter Family YPSIP31758_RS16735 PF00543 Nitrogen regulatory protein P-II YPSIP31758_RS16740 PF00005 ABC transporter YPSIP31758_RS16740 PF00664 ABC transporter transmembrane region YPSIP31758_RS16745 PF00005 ABC transporter YPSIP31758_RS16745 PF00664 ABC transporter transmembrane region YPSIP31758_RS16750 PF13404 AsnC-type helix-turn-helix domain YPSIP31758_RS16750 PF01037 Lrp/AsnC ligand binding domain YPSIP31758_RS16755 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS16765 PF12793 Sugar transport-related sRNA regulator N-term YPSIP31758_RS16765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS16770 PF06508 Queuosine biosynthesis protein QueC YPSIP31758_RS16785 PF13145 PPIC-type PPIASE domain YPSIP31758_RS16790 PF00216 Bacterial DNA-binding protein YPSIP31758_RS16795 PF02190 ATP-dependent protease La (LON) substrate-binding domain YPSIP31758_RS16795 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS16795 PF05362 Lon protease (S16) C-terminal proteolytic domain YPSIP31758_RS16800 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS16800 PF06689 ClpX C4-type zinc finger YPSIP31758_RS16800 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS16805 PF00574 Clp protease YPSIP31758_RS16810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPSIP31758_RS16810 PF05698 Bacterial trigger factor protein (TF) C-terminus YPSIP31758_RS16810 PF05697 Bacterial trigger factor protein (TF) YPSIP31758_RS16820 PF01722 BolA-like protein YPSIP31758_RS16825 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YPSIP31758_RS16825 PF03923 Uncharacterized lipoprotein YPSIP31758_RS16830 PF07690 Major Facilitator Superfamily YPSIP31758_RS16835 PF03502 Nucleoside-specific channel-forming protein, Tsx YPSIP31758_RS16840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YPSIP31758_RS16840 PF06481 COX Aromatic Rich Motif YPSIP31758_RS16845 PF00115 Cytochrome C and Quinol oxidase polypeptide I YPSIP31758_RS16850 PF00510 Cytochrome c oxidase subunit III YPSIP31758_RS16855 PF03626 Prokaryotic Cytochrome C oxidase subunit IV YPSIP31758_RS16860 PF01040 UbiA prenyltransferase family YPSIP31758_RS16865 PF07690 Major Facilitator Superfamily YPSIP31758_RS16870 PF04461 Protein of unknown function (DUF520) YPSIP31758_RS16875 PF08546 Ketopantoate reductase PanE/ApbA C terminal YPSIP31758_RS16875 PF02558 Ketopantoate reductase PanE/ApbA YPSIP31758_RS16880 PF01965 DJ-1/PfpI family YPSIP31758_RS16885 PF02926 THUMP domain YPSIP31758_RS16885 PF02568 Thiamine biosynthesis protein (ThiI) YPSIP31758_RS16895 PF02609 Exonuclease VII small subunit YPSIP31758_RS16900 PF00348 Polyprenyl synthetase YPSIP31758_RS16905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YPSIP31758_RS16905 PF02779 Transketolase, pyrimidine binding domain YPSIP31758_RS16905 PF02780 Transketolase, C-terminal domain YPSIP31758_RS16910 PF04608 Phosphatidylglycerophosphatase A YPSIP31758_RS16915 PF02769 AIR synthase related protein, C-terminal domain YPSIP31758_RS16915 PF00586 AIR synthase related protein, N-terminal domain YPSIP31758_RS16920 PF01029 NusB family YPSIP31758_RS16925 PF00885 6,7-dimethyl-8-ribityllumazine synthase YPSIP31758_RS16930 PF01872 RibD C-terminal domain YPSIP31758_RS16930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YPSIP31758_RS16935 PF03477 ATP cone domain YPSIP31758_RS16950 PF07549 SecD/SecF GG Motif YPSIP31758_RS16950 PF02355 Protein export membrane protein YPSIP31758_RS16955 PF07549 SecD/SecF GG Motif YPSIP31758_RS16955 PF02355 Protein export membrane protein YPSIP31758_RS16955 PF13721 SecD export protein N-terminal TM region YPSIP31758_RS16960 PF02699 Preprotein translocase subunit YPSIP31758_RS16965 PF01702 Queuine tRNA-ribosyltransferase YPSIP31758_RS16970 PF02547 Queuosine biosynthesis protein YPSIP31758_RS16975 PF04336 Acyl carrier protein phosphodiesterase YPSIP31758_RS16980 PF00578 AhpC/TSA family YPSIP31758_RS16980 PF10417 C-terminal domain of 1-Cys peroxiredoxin YPSIP31758_RS16985 PF01797 Transposase IS200 like YPSIP31758_RS17000 PF00106 short chain dehydrogenase YPSIP31758_RS17005 PF02903 Alpha amylase, N-terminal ig-like domain YPSIP31758_RS17005 PF00128 Alpha amylase, catalytic domain YPSIP31758_RS17010 PF00324 Amino acid permease YPSIP31758_RS17015 PF05525 Branched-chain amino acid transport protein YPSIP31758_RS17020 PF12849 PBP superfamily domain YPSIP31758_RS17025 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS17025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS17025 PF11808 Phosphate regulon sensor protein PhoR YPSIP31758_RS17025 PF00989 PAS fold YPSIP31758_RS17030 PF00072 Response regulator receiver domain YPSIP31758_RS17030 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS17040 PF12320 Type 5 capsule protein repressor C-terminal domain YPSIP31758_RS17040 PF00149 Calcineurin-like phosphoesterase YPSIP31758_RS17045 PF13476 AAA domain YPSIP31758_RS17050 PF00480 ROK family YPSIP31758_RS17055 PF04381 Putative exonuclease, RdgC YPSIP31758_RS17060 PF06865 Pyrimidine/purine nucleoside phosphorylase YPSIP31758_RS17070 PF01202 Shikimate kinase YPSIP31758_RS17085 PF08241 Methyltransferase domain YPSIP31758_RS17095 PF07317 Flagellar regulator YcgR YPSIP31758_RS17095 PF07238 PilZ domain YPSIP31758_RS17100 PF00171 Aldehyde dehydrogenase family YPSIP31758_RS17105 PF01472 PUA domain YPSIP31758_RS17105 PF00696 Amino acid kinase family YPSIP31758_RS17110 PF07417 Sigma factor-binding transcriptional regulator Crl YPSIP31758_RS17115 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) YPSIP31758_RS17120 PF00156 Phosphoribosyl transferase domain YPSIP31758_RS17145 PF07687 Peptidase dimerisation domain YPSIP31758_RS17145 PF01546 Peptidase family M20/M25/M40 YPSIP31758_RS17150 PF00817 impB/mucB/samB family YPSIP31758_RS17150 PF11799 impB/mucB/samB family C-terminal domain YPSIP31758_RS17150 PF11798 IMS family HHH motif YPSIP31758_RS17155 PF03009 Glycerophosphoryl diester phosphodiesterase family YPSIP31758_RS17165 PF02424 ApbE family YPSIP31758_RS17170 PF00111 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS17170 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS17170 PF00970 Oxidoreductase FAD-binding domain YPSIP31758_RS17175 PF02508 Rnf-Nqr subunit, membrane protein YPSIP31758_RS17180 PF02508 Rnf-Nqr subunit, membrane protein YPSIP31758_RS17185 PF04205 FMN-binding domain YPSIP31758_RS17190 PF03116 NQR2, RnfD, RnfE family YPSIP31758_RS17195 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) YPSIP31758_RS17195 PF11973 NQRA C-terminal domain YPSIP31758_RS17200 PF03734 L,D-transpeptidase catalytic domain YPSIP31758_RS17205 PF13230 Glutamine amidotransferases class-II YPSIP31758_RS17210 PF13580 SIS domain YPSIP31758_RS17215 PF09317 Domain of unknown function (DUF1974) YPSIP31758_RS17215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YPSIP31758_RS17215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YPSIP31758_RS17225 PF18071 HMW1C N-terminal YPSIP31758_RS17225 PF18254 HMW1 domain 2 YPSIP31758_RS17230 PF05860 haemagglutination activity domain YPSIP31758_RS17235 PF08479 POTRA domain, ShlB-type YPSIP31758_RS17235 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPSIP31758_RS17240 PF01636 Phosphotransferase enzyme family YPSIP31758_RS17245 PF01008 Initiation factor 2 subunit family YPSIP31758_RS17250 PF03079 ARD/ARD' family YPSIP31758_RS17260 PF00596 Class II Aldolase and Adducin N-terminal domain YPSIP31758_RS17265 PF00155 Aminotransferase class I and II YPSIP31758_RS17270 PF00795 Carbon-nitrogen hydrolase YPSIP31758_RS17275 PF07687 Peptidase dimerisation domain YPSIP31758_RS17275 PF01546 Peptidase family M20/M25/M40 YPSIP31758_RS17280 PF00266 Aminotransferase class-V YPSIP31758_RS17285 PF00005 ABC transporter YPSIP31758_RS17290 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS17295 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS17300 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS17320 PF01425 Amidase YPSIP31758_RS17330 PF07690 Major Facilitator Superfamily YPSIP31758_RS17335 PF03591 AzlC protein YPSIP31758_RS17340 PF05437 Branched-chain amino acid transport protein (AzlD) YPSIP31758_RS17345 PF01047 MarR family YPSIP31758_RS17350 PF00529 HlyD membrane-fusion protein of T1SS YPSIP31758_RS17350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS17355 PF07690 Major Facilitator Superfamily YPSIP31758_RS17360 PF00588 SpoU rRNA Methylase family YPSIP31758_RS17360 PF08032 RNA 2'-O ribose methyltransferase substrate binding YPSIP31758_RS17365 PF00085 Thioredoxin YPSIP31758_RS17370 PF03942 DTW domain YPSIP31758_RS17375 PF13380 CoA binding domain YPSIP31758_RS17375 PF13607 Succinyl-CoA ligase like flavodoxin domain YPSIP31758_RS17375 PF00583 Acetyltransferase (GNAT) family YPSIP31758_RS17380 PF13091 PLD-like domain YPSIP31758_RS17385 PF10043 Predicted periplasmic lipoprotein (DUF2279) YPSIP31758_RS17420 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS17420 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS17420 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS17420 PF02861 Clp amino terminal domain, pathogenicity island component YPSIP31758_RS17420 PF17871 AAA lid domain YPSIP31758_RS17425 PF02578 Multi-copper polyphenol oxidoreductase laccase YPSIP31758_RS17430 PF00849 RNA pseudouridylate synthase YPSIP31758_RS17430 PF01479 S4 domain YPSIP31758_RS17435 PF13525 Outer membrane lipoprotein YPSIP31758_RS17440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YPSIP31758_RS17445 PF01817 Chorismate mutase type II YPSIP31758_RS17445 PF00800 Prephenate dehydratase YPSIP31758_RS17450 PF01817 Chorismate mutase type II YPSIP31758_RS17450 PF02153 Prephenate dehydrogenase YPSIP31758_RS17455 PF00793 DAHP synthetase I family YPSIP31758_RS17460 PF00072 Response regulator receiver domain YPSIP31758_RS17460 PF04397 LytTr DNA-binding domain YPSIP31758_RS17465 PF03605 Anaerobic c4-dicarboxylate membrane transporter YPSIP31758_RS17470 PF04338 Protein of unknown function, DUF481 YPSIP31758_RS17475 PF01797 Transposase IS200 like YPSIP31758_RS17485 PF01245 Ribosomal protein L19 YPSIP31758_RS17490 PF01746 tRNA (Guanine-1)-methyltransferase YPSIP31758_RS17495 PF01782 RimM N-terminal domain YPSIP31758_RS17495 PF05239 PRC-barrel domain YPSIP31758_RS17500 PF00886 Ribosomal protein S16 YPSIP31758_RS17505 PF02881 SRP54-type protein, helical bundle domain YPSIP31758_RS17505 PF00448 SRP54-type protein, GTPase domain YPSIP31758_RS17505 PF02978 Signal peptide binding domain YPSIP31758_RS17510 PF01578 Cytochrome C assembly protein YPSIP31758_RS17515 PF03471 Transporter associated domain YPSIP31758_RS17515 PF01595 Cyclin M transmembrane N-terminal domain YPSIP31758_RS17515 PF00571 CBS domain YPSIP31758_RS17520 PF02664 S-Ribosylhomocysteinase (LuxS) YPSIP31758_RS17525 PF04262 Glutamate-cysteine ligase YPSIP31758_RS17530 PF09335 SNARE associated Golgi protein YPSIP31758_RS17535 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS17560 PF02599 Global regulator protein family YPSIP31758_RS17565 PF01411 tRNA synthetases class II (A) YPSIP31758_RS17565 PF02272 DHHA1 domain YPSIP31758_RS17565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YPSIP31758_RS17570 PF02631 RecX family YPSIP31758_RS17575 PF00154 recA bacterial DNA recombination protein YPSIP31758_RS17580 PF02464 Competence-damaged protein YPSIP31758_RS17585 PF07690 Major Facilitator Superfamily YPSIP31758_RS17600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS17600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS17605 PF02779 Transketolase, pyrimidine binding domain YPSIP31758_RS17605 PF02780 Transketolase, C-terminal domain YPSIP31758_RS17610 PF00456 Transketolase, thiamine diphosphate binding domain YPSIP31758_RS17615 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS17620 PF00005 ABC transporter YPSIP31758_RS17630 PF13407 Periplasmic binding protein domain YPSIP31758_RS17635 PF00141 Peroxidase YPSIP31758_RS17640 PF07361 Cytochrome b562 YPSIP31758_RS17645 PF01292 Prokaryotic cytochrome b561 YPSIP31758_RS17650 PF02613 Nitrate reductase delta subunit YPSIP31758_RS17655 PF04976 DMSO reductase anchor subunit (DmsC) YPSIP31758_RS17660 PF12800 4Fe-4S binding domain YPSIP31758_RS17660 PF13247 4Fe-4S dicluster domain YPSIP31758_RS17665 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS17665 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS17665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPSIP31758_RS17670 PF00596 Class II Aldolase and Adducin N-terminal domain YPSIP31758_RS17675 PF00455 DeoR C terminal sensor domain YPSIP31758_RS17675 PF08220 DeoR-like helix-turn-helix domain YPSIP31758_RS17685 PF00005 ABC transporter YPSIP31758_RS17690 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS17695 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS17700 PF01261 Xylose isomerase-like TIM barrel YPSIP31758_RS17705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS17705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS17710 PF05683 Fumarase C-terminus YPSIP31758_RS17710 PF05681 Fumarate hydratase (Fumerase) YPSIP31758_RS17720 PF00557 Metallopeptidase family M24 YPSIP31758_RS17730 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS17730 PF00593 TonB dependent receptor YPSIP31758_RS17740 PF14376 Haem-binding domain YPSIP31758_RS17740 PF00034 Cytochrome c YPSIP31758_RS17740 PF03150 Di-haem cytochrome c peroxidase YPSIP31758_RS17745 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS17760 PF01022 Bacterial regulatory protein, arsR family YPSIP31758_RS17765 PF02040 Arsenical pump membrane protein YPSIP31758_RS17770 PF04198 Putative sugar-binding domain YPSIP31758_RS17770 PF13936 Helix-turn-helix domain YPSIP31758_RS17775 PF02734 DAK2 domain YPSIP31758_RS17780 PF02733 Dak1 domain YPSIP31758_RS17790 PF08240 Alcohol dehydrogenase GroES-like domain YPSIP31758_RS17790 PF00107 Zinc-binding dehydrogenase YPSIP31758_RS17795 PF02502 Ribose/Galactose Isomerase YPSIP31758_RS17805 PF05190 MutS family domain IV YPSIP31758_RS17805 PF01624 MutS domain I YPSIP31758_RS17805 PF05188 MutS domain II YPSIP31758_RS17805 PF05192 MutS domain III YPSIP31758_RS17805 PF00488 MutS domain V YPSIP31758_RS17810 PF00140 Sigma-70 factor, region 1.2 YPSIP31758_RS17810 PF04542 Sigma-70 region 2 YPSIP31758_RS17810 PF04539 Sigma-70 region 3 YPSIP31758_RS17810 PF04545 Sigma-70, region 4 YPSIP31758_RS17815 PF01551 Peptidase family M23 YPSIP31758_RS17815 PF01476 LysM domain YPSIP31758_RS17825 PF01975 Survival protein SurE YPSIP31758_RS17830 PF01142 tRNA pseudouridine synthase D (TruD) YPSIP31758_RS17835 PF02542 YgbB family YPSIP31758_RS17840 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPSIP31758_RS17845 PF04977 Septum formation initiator YPSIP31758_RS17850 PF12084 Protein of unknown function (DUF3561) YPSIP31758_RS17860 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS17865 PF01507 Phosphoadenosine phosphosulfate reductase family YPSIP31758_RS17870 PF10414 Sirohaem synthase dimerisation region YPSIP31758_RS17870 PF14824 Sirohaem biosynthesis protein central YPSIP31758_RS17870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YPSIP31758_RS17890 PF01507 Phosphoadenosine phosphosulfate reductase family YPSIP31758_RS17895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YPSIP31758_RS17895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YPSIP31758_RS17900 PF00175 Oxidoreductase NAD-binding domain YPSIP31758_RS17900 PF00258 Flavodoxin YPSIP31758_RS17900 PF00667 FAD binding domain YPSIP31758_RS17905 PF01242 6-pyruvoyl tetrahydropterin synthase YPSIP31758_RS17910 PF04055 Radical SAM superfamily YPSIP31758_RS17915 PF00080 Copper/zinc superoxide dismutase (SODC) YPSIP31758_RS17920 PF03952 Enolase, N-terminal domain YPSIP31758_RS17920 PF00113 Enolase, C-terminal TIM barrel domain YPSIP31758_RS17925 PF00117 Glutamine amidotransferase class-I YPSIP31758_RS17925 PF06418 CTP synthase N-terminus YPSIP31758_RS17930 PF03819 MazG nucleotide pyrophosphohydrolase domain YPSIP31758_RS17940 PF02824 TGS domain YPSIP31758_RS17940 PF04607 Region found in RelA / SpoT proteins YPSIP31758_RS17940 PF13291 ACT domain YPSIP31758_RS17945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YPSIP31758_RS17945 PF01627 Hpt domain YPSIP31758_RS17945 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS17945 PF00672 HAMP domain YPSIP31758_RS17945 PF00072 Response regulator receiver domain YPSIP31758_RS17950 PF00595 PDZ domain YPSIP31758_RS17955 PF13286 Phosphohydrolase-associated domain YPSIP31758_RS17955 PF01966 HD domain YPSIP31758_RS17960 PF01048 Phosphorylase superfamily YPSIP31758_RS17965 PF01497 Periplasmic binding protein YPSIP31758_RS17970 PF03458 UPF0126 domain YPSIP31758_RS17975 PF01521 Iron-sulphur cluster biosynthesis YPSIP31758_RS17980 PF00654 Voltage gated chloride channel YPSIP31758_RS17985 PF00202 Aminotransferase class-III YPSIP31758_RS17990 PF01032 FecCD transport family YPSIP31758_RS17995 PF01497 Periplasmic binding protein YPSIP31758_RS18000 PF00005 ABC transporter YPSIP31758_RS18005 PF14814 Bifunctional transglycosylase second domain YPSIP31758_RS18005 PF00905 Penicillin binding protein transpeptidase domain YPSIP31758_RS18005 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal YPSIP31758_RS18005 PF00912 Transglycosylase YPSIP31758_RS18010 PF08482 ATP-dependent helicase C-terminal YPSIP31758_RS18010 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS18010 PF04408 Helicase associated domain (HA2) YPSIP31758_RS18010 PF00270 DEAD/DEAH box helicase YPSIP31758_RS18015 PF02834 LigT like Phosphoesterase YPSIP31758_RS18020 PF17746 SfsA N-terminal OB domain YPSIP31758_RS18020 PF03749 Sugar fermentation stimulation protein RE domain YPSIP31758_RS18025 PF01258 Prokaryotic dksA/traR C4-type zinc finger YPSIP31758_RS18030 PF00749 tRNA synthetases class I (E and Q), catalytic domain YPSIP31758_RS18035 PF12626 Polymerase A arginine-rich C-terminus YPSIP31758_RS18035 PF01743 Poly A polymerase head domain YPSIP31758_RS18035 PF12627 Probable RNA and SrmB- binding site of polymerase A YPSIP31758_RS18040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YPSIP31758_RS18045 PF02548 Ketopantoate hydroxymethyltransferase YPSIP31758_RS18050 PF02569 Pantoate-beta-alanine ligase YPSIP31758_RS18055 PF02261 Aspartate decarboxylase YPSIP31758_RS18060 PF01522 Polysaccharide deacetylase YPSIP31758_RS18065 PF01061 ABC-2 type transporter YPSIP31758_RS18070 PF00005 ABC transporter YPSIP31758_RS18075 PF00484 Carbonic anhydrase YPSIP31758_RS18080 PF00156 Phosphoribosyl transferase domain YPSIP31758_RS18085 PF00394 Multicopper oxidase YPSIP31758_RS18085 PF07731 Multicopper oxidase YPSIP31758_RS18085 PF07732 Multicopper oxidase YPSIP31758_RS18085 PF10518 TAT (twin-arginine translocation) pathway signal sequence YPSIP31758_RS18090 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) YPSIP31758_RS18095 PF17284 Spermidine synthase tetramerisation domain YPSIP31758_RS18100 PF02675 S-adenosylmethionine decarboxylase YPSIP31758_RS18105 PF00892 EamA-like transporter family YPSIP31758_RS18110 PF06062 Uncharacterised protein family (UPF0231) YPSIP31758_RS18115 PF11791 Aconitate B N-terminal domain YPSIP31758_RS18115 PF06434 Aconitate hydratase 2 N-terminus YPSIP31758_RS18115 PF00330 Aconitase family (aconitate hydratase) YPSIP31758_RS18120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPSIP31758_RS18120 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS18125 PF02817 e3 binding domain YPSIP31758_RS18125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YPSIP31758_RS18125 PF00364 Biotin-requiring enzyme YPSIP31758_RS18130 PF17831 Pyruvate dehydrogenase E1 component middle domain YPSIP31758_RS18130 PF00456 Transketolase, thiamine diphosphate binding domain YPSIP31758_RS18135 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS18135 PF07729 FCD domain YPSIP31758_RS18140 PF00324 Amino acid permease YPSIP31758_RS18145 PF17113 Regulatory signalling modulator protein AmpE YPSIP31758_RS18150 PF01510 N-acetylmuramoyl-L-alanine amidase YPSIP31758_RS18155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YPSIP31758_RS18155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YPSIP31758_RS18160 PF07963 Prokaryotic N-terminal methylation motif YPSIP31758_RS18165 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain YPSIP31758_RS18165 PF00437 Type II/IV secretion system protein YPSIP31758_RS18170 PF00482 Type II secretion system (T2SS), protein F YPSIP31758_RS18175 PF00478 IMP dehydrogenase / GMP reductase domain YPSIP31758_RS18185 PF01121 Dephospho-CoA kinase YPSIP31758_RS18190 PF07072 Cell division protein YPSIP31758_RS18195 PF03884 DNA gyrase inhibitor YacG YPSIP31758_RS18200 PF00293 NUDIX domain YPSIP31758_RS18205 PF07516 SecA Wing and Scaffold domain YPSIP31758_RS18205 PF02810 SEC-C motif YPSIP31758_RS18205 PF07517 SecA DEAD-like domain YPSIP31758_RS18205 PF01043 SecA preprotein cross-linking domain YPSIP31758_RS18210 PF06558 Secretion monitor precursor protein (SecM) YPSIP31758_RS18220 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase YPSIP31758_RS18225 PF12327 FtsZ family, C-terminal domain YPSIP31758_RS18225 PF00091 Tubulin/FtsZ family, GTPase domain YPSIP31758_RS18230 PF02491 SHS2 domain inserted in FTSA YPSIP31758_RS18235 PF03799 Cell division protein FtsQ YPSIP31758_RS18235 PF08478 POTRA domain, FtsQ-type YPSIP31758_RS18240 PF07478 D-ala D-ala ligase C-terminus YPSIP31758_RS18240 PF01820 D-ala D-ala ligase N-terminus YPSIP31758_RS18245 PF01225 Mur ligase family, catalytic domain YPSIP31758_RS18245 PF02875 Mur ligase family, glutamate ligase domain YPSIP31758_RS18245 PF08245 Mur ligase middle domain YPSIP31758_RS18250 PF03033 Glycosyltransferase family 28 N-terminal domain YPSIP31758_RS18250 PF04101 Glycosyltransferase family 28 C-terminal domain YPSIP31758_RS18255 PF01098 Cell cycle protein YPSIP31758_RS18260 PF08245 Mur ligase middle domain YPSIP31758_RS18260 PF02875 Mur ligase family, glutamate ligase domain YPSIP31758_RS18265 PF00953 Glycosyl transferase family 4 YPSIP31758_RS18265 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YPSIP31758_RS18270 PF02875 Mur ligase family, glutamate ligase domain YPSIP31758_RS18270 PF01225 Mur ligase family, catalytic domain YPSIP31758_RS18270 PF08245 Mur ligase middle domain YPSIP31758_RS18275 PF01225 Mur ligase family, catalytic domain YPSIP31758_RS18275 PF08245 Mur ligase middle domain YPSIP31758_RS18275 PF02875 Mur ligase family, glutamate ligase domain YPSIP31758_RS18280 PF03717 Penicillin-binding Protein dimerisation domain YPSIP31758_RS18280 PF00905 Penicillin binding protein transpeptidase domain YPSIP31758_RS18285 PF04999 Cell division protein FtsL YPSIP31758_RS18290 PF01795 MraW methylase family YPSIP31758_RS18295 PF02381 MraZ protein, putative antitoxin-like YPSIP31758_RS18300 PF06610 L-alanine exporter YPSIP31758_RS18305 PF01797 Transposase IS200 like YPSIP31758_RS18310 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS18310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPSIP31758_RS18320 PF10369 Small subunit of acetolactate synthase YPSIP31758_RS18325 PF00205 Thiamine pyrophosphate enzyme, central domain YPSIP31758_RS18325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPSIP31758_RS18325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPSIP31758_RS18335 PF00501 AMP-binding enzyme YPSIP31758_RS18345 PF03466 LysR substrate binding domain YPSIP31758_RS18345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS18350 PF08502 LeuA allosteric (dimerisation) domain YPSIP31758_RS18350 PF00682 HMGL-like YPSIP31758_RS18355 PF00180 Isocitrate/isopropylmalate dehydrogenase YPSIP31758_RS18360 PF00330 Aconitase family (aconitate hydratase) YPSIP31758_RS18365 PF00694 Aconitase C-terminal domain YPSIP31758_RS18370 PF07690 Major Facilitator Superfamily YPSIP31758_RS18380 PF12793 Sugar transport-related sRNA regulator N-term YPSIP31758_RS18380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS18395 PF01797 Transposase IS200 like YPSIP31758_RS18405 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS18410 PF00005 ABC transporter YPSIP31758_RS18415 PF09335 SNARE associated Golgi protein YPSIP31758_RS18420 PF03104 DNA polymerase family B, exonuclease domain YPSIP31758_RS18420 PF00136 DNA polymerase family B YPSIP31758_RS18425 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS18425 PF00176 SNF2 family N-terminal domain YPSIP31758_RS18425 PF18339 RapA N-terminal Tudor like domain 1 YPSIP31758_RS18425 PF18337 RapA N-terminal Tudor like domain YPSIP31758_RS18425 PF12137 RNA polymerase recycling family C-terminal YPSIP31758_RS18435 PF06744 Type VI secretion protein IcmF C-terminal YPSIP31758_RS18435 PF06761 Intracellular multiplication and human macrophage-killing YPSIP31758_RS18435 PF14331 ImcF-related N-terminal domain YPSIP31758_RS18440 PF05736 OprF membrane domain YPSIP31758_RS18440 PF00691 OmpA family YPSIP31758_RS18445 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE YPSIP31758_RS18475 PF04717 Type VI secretion system, phage-baseplate injector YPSIP31758_RS18475 PF06715 Gp5 C-terminal repeat (3 copies) YPSIP31758_RS18480 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS18480 PF07724 AAA domain (Cdc48 subfamily) YPSIP31758_RS18480 PF10431 C-terminal, D2-small domain, of ClpB protein YPSIP31758_RS18480 PF17871 AAA lid domain YPSIP31758_RS18490 PF05947 Type VI secretion system, TssF YPSIP31758_RS18505 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPSIP31758_RS18510 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPSIP31758_RS18525 PF00849 RNA pseudouridylate synthase YPSIP31758_RS18530 PF00226 DnaJ domain YPSIP31758_RS18530 PF05099 Tellurite resistance protein TerB YPSIP31758_RS18535 PF04453 LPS transport system D YPSIP31758_RS18535 PF03968 OstA-like protein YPSIP31758_RS18540 PF00639 PPIC-type PPIASE domain YPSIP31758_RS18540 PF09312 SurA N-terminal domain YPSIP31758_RS18545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YPSIP31758_RS18550 PF00398 Ribosomal RNA adenine dimethylase YPSIP31758_RS18555 PF04379 ApaG domain YPSIP31758_RS18560 PF00149 Calcineurin-like phosphoesterase YPSIP31758_RS18575 PF00186 Dihydrofolate reductase YPSIP31758_RS18580 PF12821 Threonine/Serine exporter, ThrE YPSIP31758_RS18585 PF06738 Putative threonine/serine exporter YPSIP31758_RS18590 PF01810 LysE type translocator YPSIP31758_RS18595 PF02142 MGS-like domain YPSIP31758_RS18595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YPSIP31758_RS18595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YPSIP31758_RS18600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YPSIP31758_RS18600 PF00117 Glutamine amidotransferase class-I YPSIP31758_RS18605 PF01113 Dihydrodipicolinate reductase, N-terminus YPSIP31758_RS18605 PF05173 Dihydrodipicolinate reductase, C-terminus YPSIP31758_RS18615 PF02401 LytB protein YPSIP31758_RS18620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPSIP31758_RS18625 PF01252 Signal peptidase (SPase) II YPSIP31758_RS18630 PF06827 Zinc finger found in FPG and IleRS YPSIP31758_RS18630 PF00133 tRNA synthetases class I (I, L, M and V) YPSIP31758_RS18630 PF08264 Anticodon-binding domain of tRNA YPSIP31758_RS18635 PF01687 Riboflavin kinase YPSIP31758_RS18635 PF06574 FAD synthetase YPSIP31758_RS18645 PF01649 Ribosomal protein S20 YPSIP31758_RS18650 PF03466 LysR substrate binding domain YPSIP31758_RS18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS18655 PF06965 Na+/H+ antiporter 1 YPSIP31758_RS18660 PF00226 DnaJ domain YPSIP31758_RS18660 PF01556 DnaJ C terminal domain YPSIP31758_RS18660 PF00684 DnaJ central domain YPSIP31758_RS18665 PF00012 Hsp70 protein YPSIP31758_RS18670 PF01184 GPR1/FUN34/yaaH family YPSIP31758_RS18680 PF07690 Major Facilitator Superfamily YPSIP31758_RS18685 PF00994 Probable molybdopterin binding domain YPSIP31758_RS18690 PF00923 Transaldolase/Fructose-6-phosphate aldolase YPSIP31758_RS18695 PF03883 Peroxide stress protein YaaA YPSIP31758_RS18700 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS18700 PF14821 Threonine synthase N terminus YPSIP31758_RS18705 PF08544 GHMP kinases C terminal YPSIP31758_RS18705 PF00288 GHMP kinases N terminal domain YPSIP31758_RS18710 PF00742 Homoserine dehydrogenase YPSIP31758_RS18710 PF01842 ACT domain YPSIP31758_RS18710 PF03447 Homoserine dehydrogenase, NAD binding domain YPSIP31758_RS18710 PF13840 ACT domain YPSIP31758_RS18710 PF00696 Amino acid kinase family YPSIP31758_RS18715 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS18715 PF00072 Response regulator receiver domain YPSIP31758_RS18720 PF05981 CreA protein YPSIP31758_RS18725 PF06445 GyrI-like small molecule binding domain YPSIP31758_RS18725 PF12833 Helix-turn-helix domain YPSIP31758_RS18730 PF00300 Histidine phosphatase superfamily (branch 1) YPSIP31758_RS18735 PF01931 Protein of unknown function DUF84 YPSIP31758_RS18740 PF01371 Trp repressor protein YPSIP31758_RS18745 PF01464 Transglycosylase SLT domain YPSIP31758_RS18745 PF14718 Soluble lytic murein transglycosylase L domain YPSIP31758_RS18750 PF00690 Cation transporter/ATPase, N-terminus YPSIP31758_RS18750 PF00689 Cation transporting ATPase, C-terminus YPSIP31758_RS18760 PF17152 Periplasmic sensor domain YPSIP31758_RS18760 PF00990 Diguanylate cyclase, GGDEF domain YPSIP31758_RS18765 PF00691 OmpA family YPSIP31758_RS18770 PF00005 ABC transporter YPSIP31758_RS18770 PF12848 ABC transporter YPSIP31758_RS18775 PF02661 Fic/DOC family YPSIP31758_RS18780 PF01381 Helix-turn-helix YPSIP31758_RS18780 PF13521 AAA domain YPSIP31758_RS18785 PF18073 Rubredoxin metal binding domain YPSIP31758_RS18790 PF18429 Domain of unknown function (DUF5609) YPSIP31758_RS18795 PF10144 Bacterial virulence factor haemolysin YPSIP31758_RS18800 PF01048 Phosphorylase superfamily YPSIP31758_RS18805 PF01676 Metalloenzyme superfamily YPSIP31758_RS18810 PF02885 Glycosyl transferase family, helical bundle domain YPSIP31758_RS18810 PF00591 Glycosyl transferase family, a/b domain YPSIP31758_RS18810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YPSIP31758_RS18815 PF01791 DeoC/LacD family aldolase YPSIP31758_RS18820 PF01773 Na+ dependent nucleoside transporter N-terminus YPSIP31758_RS18820 PF07662 Na+ dependent nucleoside transporter C-terminus YPSIP31758_RS18820 PF07670 Nucleoside recognition YPSIP31758_RS18825 PF01026 TatD related DNase YPSIP31758_RS18830 PF01734 Patatin-like phospholipase YPSIP31758_RS18835 PF07043 Protein of unknown function (DUF1328) YPSIP31758_RS18840 PF04972 BON domain YPSIP31758_RS18845 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS18845 PF16658 Class II release factor RF3, C-terminal domain YPSIP31758_RS18845 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS18850 PF00583 Acetyltransferase (GNAT) family YPSIP31758_RS18855 PF03603 DNA polymerase III psi subunit YPSIP31758_RS18860 PF05175 Methyltransferase small domain YPSIP31758_RS18860 PF08468 Methyltransferase small domain N-terminal YPSIP31758_RS18880 PF07256 Protein of unknown function (DUF1435) YPSIP31758_RS18885 PF00990 Diguanylate cyclase, GGDEF domain YPSIP31758_RS18890 PF01095 Pectinesterase YPSIP31758_RS18910 PF00873 AcrB/AcrD/AcrF family YPSIP31758_RS18915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS18935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YPSIP31758_RS18940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS18940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS18945 PF04198 Putative sugar-binding domain YPSIP31758_RS18945 PF00325 Bacterial regulatory proteins, crp family YPSIP31758_RS18955 PF00005 ABC transporter YPSIP31758_RS18960 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS18965 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS18970 PF13407 Periplasmic binding protein domain YPSIP31758_RS18975 PF01791 DeoC/LacD family aldolase YPSIP31758_RS18980 PF03992 Antibiotic biosynthesis monooxygenase YPSIP31758_RS18985 PF10696 Protein of unknown function (DUF2501) YPSIP31758_RS18990 PF02896 PEP-utilising enzyme, TIM barrel domain YPSIP31758_RS18990 PF05524 PEP-utilising enzyme, N-terminal YPSIP31758_RS18990 PF00391 PEP-utilising enzyme, mobile domain YPSIP31758_RS18990 PF00381 PTS HPr component phosphorylation site YPSIP31758_RS18990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPSIP31758_RS19000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPSIP31758_RS19005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPSIP31758_RS19010 PF12833 Helix-turn-helix domain YPSIP31758_RS19020 PF05987 Bacterial protein of unknown function (DUF898) YPSIP31758_RS19030 PF02384 N-6 DNA Methylase YPSIP31758_RS19030 PF12161 HsdM N-terminal domain YPSIP31758_RS19040 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) YPSIP31758_RS19040 PF12008 Type I restriction and modification enzyme - subunit R C terminal YPSIP31758_RS19040 PF18766 SWI2/SNF2 ATPase YPSIP31758_RS19055 PF03739 Lipopolysaccharide export system permease LptF/LptG YPSIP31758_RS19060 PF03739 Lipopolysaccharide export system permease LptF/LptG YPSIP31758_RS19065 PF02789 Cytosol aminopeptidase family, N-terminal domain YPSIP31758_RS19065 PF00883 Cytosol aminopeptidase family, catalytic domain YPSIP31758_RS19070 PF04364 DNA polymerase III chi subunit, HolC YPSIP31758_RS19075 PF08264 Anticodon-binding domain of tRNA YPSIP31758_RS19075 PF10458 Valyl tRNA synthetase tRNA binding arm YPSIP31758_RS19075 PF00133 tRNA synthetases class I (I, L, M and V) YPSIP31758_RS19080 PF00583 Acetyltransferase (GNAT) family YPSIP31758_RS19085 PF06877 Regulator of ribonuclease activity B YPSIP31758_RS19090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YPSIP31758_RS19090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YPSIP31758_RS19095 PF04074 YhcH/YjgK/YiaL YPSIP31758_RS19105 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS19110 PF12911 N-terminal TM domain of oligopeptide transport permease C YPSIP31758_RS19110 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS19115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS19115 PF00005 ABC transporter YPSIP31758_RS19120 PF00005 ABC transporter YPSIP31758_RS19120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS19125 PF13597 Anaerobic ribonucleoside-triphosphate reductase YPSIP31758_RS19125 PF03477 ATP cone domain YPSIP31758_RS19135 PF07702 UTRA domain YPSIP31758_RS19135 PF00392 Bacterial regulatory proteins, gntR family YPSIP31758_RS19140 PF06754 Phosphonate metabolism protein PhnG YPSIP31758_RS19145 PF05845 Bacterial phosphonate metabolism protein (PhnH) YPSIP31758_RS19150 PF05861 Bacterial phosphonate metabolism protein (PhnI) YPSIP31758_RS19155 PF06007 Phosphonate metabolism protein PhnJ YPSIP31758_RS19160 PF00005 ABC transporter YPSIP31758_RS19165 PF00005 ABC transporter YPSIP31758_RS19170 PF07969 Amidohydrolase family YPSIP31758_RS19180 PF12706 Beta-lactamase superfamily domain YPSIP31758_RS19185 PF13460 NAD(P)H-binding YPSIP31758_RS19200 PF00005 ABC transporter YPSIP31758_RS19200 PF03459 TOBE domain YPSIP31758_RS19200 PF17912 MalK OB fold domain YPSIP31758_RS19205 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS19210 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS19215 PF13416 Bacterial extracellular solute-binding protein YPSIP31758_RS19230 PF01541 GIY-YIG catalytic domain YPSIP31758_RS19235 PF13508 Acetyltransferase (GNAT) domain YPSIP31758_RS19240 PF02036 SCP-2 sterol transfer family YPSIP31758_RS19250 PF01136 Peptidase family U32 YPSIP31758_RS19255 PF01136 Peptidase family U32 YPSIP31758_RS19260 PF02321 Outer membrane efflux protein YPSIP31758_RS19260 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YPSIP31758_RS19265 PF00873 AcrB/AcrD/AcrF family YPSIP31758_RS19270 PF00529 HlyD membrane-fusion protein of T1SS YPSIP31758_RS19270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YPSIP31758_RS19275 PF00296 Luciferase-like monooxygenase YPSIP31758_RS19280 PF01381 Helix-turn-helix YPSIP31758_RS19295 PF03880 DbpA RNA binding domain YPSIP31758_RS19295 PF00270 DEAD/DEAH box helicase YPSIP31758_RS19295 PF12343 Cold shock protein DEAD box A YPSIP31758_RS19295 PF00271 Helicase conserved C-terminal domain YPSIP31758_RS19300 PF13181 Tetratricopeptide repeat YPSIP31758_RS19300 PF07719 Tetratricopeptide repeat YPSIP31758_RS19305 PF01138 3' exoribonuclease family, domain 1 YPSIP31758_RS19305 PF00575 S1 RNA binding domain YPSIP31758_RS19305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YPSIP31758_RS19305 PF03725 3' exoribonuclease family, domain 2 YPSIP31758_RS19305 PF00013 KH domain YPSIP31758_RS19310 PF00312 Ribosomal protein S15 YPSIP31758_RS19315 PF01509 TruB family pseudouridylate synthase (N terminal domain) YPSIP31758_RS19315 PF16198 tRNA pseudouridylate synthase B C-terminal domain YPSIP31758_RS19315 PF09157 Pseudouridine synthase II TruB, C-terminal YPSIP31758_RS19320 PF02033 Ribosome-binding factor A YPSIP31758_RS19325 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS19325 PF11987 Translation-initiation factor 2 YPSIP31758_RS19325 PF08364 Bacterial translation initiation factor IF-2 associated region YPSIP31758_RS19325 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS19325 PF04760 Translation initiation factor IF-2, N-terminal region YPSIP31758_RS19330 PF00575 S1 RNA binding domain YPSIP31758_RS19330 PF08529 NusA N-terminal domain YPSIP31758_RS19330 PF13184 NusA-like KH domain YPSIP31758_RS19335 PF02576 RimP N-terminal domain YPSIP31758_RS19335 PF17384 RimP C-terminal SH3 domain YPSIP31758_RS19350 PF03840 Preprotein translocase SecG subunit YPSIP31758_RS19355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPSIP31758_RS19355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPSIP31758_RS19355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPSIP31758_RS19355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPSIP31758_RS19360 PF00809 Pterin binding enzyme YPSIP31758_RS19365 PF01434 Peptidase family M41 YPSIP31758_RS19365 PF00004 ATPase family associated with various cellular activities (AAA) YPSIP31758_RS19365 PF06480 FtsH Extracellular YPSIP31758_RS19365 PF17862 AAA+ lid domain YPSIP31758_RS19370 PF01728 FtsJ-like methyltransferase YPSIP31758_RS19375 PF01985 CRS1 / YhbY (CRM) domain YPSIP31758_RS19380 PF03449 Transcription elongation factor, N-terminal YPSIP31758_RS19380 PF01272 Transcription elongation factor, GreA/GreB, C-term YPSIP31758_RS19385 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family YPSIP31758_RS19390 PF00072 Response regulator receiver domain YPSIP31758_RS19390 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS19395 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS19395 PF00672 HAMP domain YPSIP31758_RS19400 PF01018 GTP1/OBG YPSIP31758_RS19400 PF01926 50S ribosome-binding GTPase YPSIP31758_RS19405 PF00892 EamA-like transporter family YPSIP31758_RS19410 PF01016 Ribosomal L27 protein YPSIP31758_RS19415 PF00829 Ribosomal prokaryotic L21 protein YPSIP31758_RS19420 PF00348 Polyprenyl synthetase YPSIP31758_RS19430 PF13693 Winged helix-turn-helix DNA-binding YPSIP31758_RS19435 PF00056 lactate/malate dehydrogenase, NAD binding domain YPSIP31758_RS19435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YPSIP31758_RS19440 PF02863 Arginine repressor, C-terminal domain YPSIP31758_RS19440 PF01316 Arginine repressor, DNA binding domain YPSIP31758_RS19455 PF01225 Mur ligase family, catalytic domain YPSIP31758_RS19455 PF02875 Mur ligase family, glutamate ligase domain YPSIP31758_RS19455 PF08245 Mur ligase middle domain YPSIP31758_RS19460 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain YPSIP31758_RS19465 PF00719 Inorganic pyrophosphatase YPSIP31758_RS19470 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like YPSIP31758_RS19475 PF04357 TamB, inner membrane protein subunit of TAM complex YPSIP31758_RS19480 PF07244 Surface antigen variable number repeat YPSIP31758_RS19480 PF17243 POTRA domain TamA domain 1 YPSIP31758_RS19480 PF01103 Surface antigen YPSIP31758_RS19485 PF01625 Peptide methionine sulfoxide reductase YPSIP31758_RS19490 PF01595 Cyclin M transmembrane N-terminal domain YPSIP31758_RS19490 PF03471 Transporter associated domain YPSIP31758_RS19490 PF00571 CBS domain YPSIP31758_RS19495 PF06526 Protein of unknown function (DUF1107) YPSIP31758_RS19500 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) YPSIP31758_RS19505 PF00459 Inositol monophosphatase family YPSIP31758_RS19510 PF02872 5'-nucleotidase, C-terminal domain YPSIP31758_RS19510 PF00149 Calcineurin-like phosphoesterase YPSIP31758_RS19515 PF01814 Hemerythrin HHE cation binding domain YPSIP31758_RS19515 PF04405 Domain of Unknown function (DUF542) YPSIP31758_RS19520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPSIP31758_RS19520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YPSIP31758_RS19525 PF08525 Opacity-associated protein A N-terminal motif YPSIP31758_RS19525 PF04225 Opacity-associated protein A LysM-like domain YPSIP31758_RS19535 PF01281 Ribosomal protein L9, N-terminal domain YPSIP31758_RS19535 PF03948 Ribosomal protein L9, C-terminal domain YPSIP31758_RS19540 PF01084 Ribosomal protein S18 YPSIP31758_RS19545 PF00436 Single-strand binding protein family YPSIP31758_RS19550 PF01250 Ribosomal protein S6 YPSIP31758_RS19560 PF00326 Prolyl oligopeptidase family YPSIP31758_RS19565 PF07338 Protein of unknown function (DUF1471) YPSIP31758_RS19570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YPSIP31758_RS19570 PF18158 Adaptive response protein AidB N-terminal domain YPSIP31758_RS19570 PF02770 Acyl-CoA dehydrogenase, middle domain YPSIP31758_RS19575 PF08032 RNA 2'-O ribose methyltransferase substrate binding YPSIP31758_RS19575 PF00588 SpoU rRNA Methylase family YPSIP31758_RS19580 PF00575 S1 RNA binding domain YPSIP31758_RS19580 PF00773 RNB domain YPSIP31758_RS19580 PF08206 Ribonuclease B OB domain YPSIP31758_RS19580 PF08461 Ribonuclease R winged-helix domain YPSIP31758_RS19580 PF17876 Cold shock domain YPSIP31758_RS19585 PF02082 Transcriptional regulator YPSIP31758_RS19590 PF00709 Adenylosuccinate synthetase YPSIP31758_RS19595 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) YPSIP31758_RS19600 PF01145 SPFH domain / Band 7 family YPSIP31758_RS19605 PF12221 Bacterial membrane protein N terminal YPSIP31758_RS19605 PF01145 SPFH domain / Band 7 family YPSIP31758_RS19610 PF01926 50S ribosome-binding GTPase YPSIP31758_RS19610 PF16360 GTP-binding GTPase Middle Region YPSIP31758_RS19610 PF13167 GTP-binding GTPase N-terminal YPSIP31758_RS19615 PF17209 Hfq protein YPSIP31758_RS19625 PF01119 DNA mismatch repair protein, C-terminal domain YPSIP31758_RS19625 PF08676 MutL C terminal dimerisation domain YPSIP31758_RS19630 PF01520 N-acetylmuramoyl-L-alanine amidase YPSIP31758_RS19635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YPSIP31758_RS19640 PF03853 YjeF-related protein N-terminus YPSIP31758_RS19640 PF01256 Carbohydrate kinase YPSIP31758_RS19645 PF08331 Domain of unknown function (DUF1730) YPSIP31758_RS19670 PF00929 Exonuclease YPSIP31758_RS19680 PF03193 RsgA GTPase YPSIP31758_RS19685 PF02666 Phosphatidylserine decarboxylase YPSIP31758_RS19690 PF00924 Mechanosensitive ion channel YPSIP31758_RS19690 PF12794 Mechanosensitive ion channel inner membrane domain 1 YPSIP31758_RS19690 PF12795 Mechanosensitive ion channel porin domain YPSIP31758_RS19695 PF00152 tRNA synthetases class II (D, K and N) YPSIP31758_RS19705 PF00890 FAD binding domain YPSIP31758_RS19705 PF02910 Fumarate reductase flavoprotein C-term YPSIP31758_RS19710 PF13183 4Fe-4S dicluster domain YPSIP31758_RS19710 PF13085 2Fe-2S iron-sulfur cluster binding domain YPSIP31758_RS19715 PF02300 Fumarate reductase subunit C YPSIP31758_RS19720 PF02313 Fumarate reductase subunit D YPSIP31758_RS19725 PF00893 Small Multidrug Resistance protein YPSIP31758_RS19730 PF09285 Elongation factor P, C-terminal YPSIP31758_RS19730 PF08207 Elongation factor P (EF-P) KOW-like domain YPSIP31758_RS19730 PF01132 Elongation factor P (EF-P) OB domain YPSIP31758_RS19735 PF04055 Radical SAM superfamily YPSIP31758_RS19740 PF13698 Domain of unknown function (DUF4156) YPSIP31758_RS19745 PF00118 TCP-1/cpn60 chaperonin family YPSIP31758_RS19750 PF00166 Chaperonin 10 Kd subunit YPSIP31758_RS19755 PF04186 FxsA cytoplasmic membrane protein YPSIP31758_RS19760 PF00206 Lyase YPSIP31758_RS19760 PF10415 Fumarase C C-terminus YPSIP31758_RS19765 PF03605 Anaerobic c4-dicarboxylate membrane transporter YPSIP31758_RS19770 PF03091 CutA1 divalent ion tolerance protein YPSIP31758_RS19775 PF02683 Cytochrome C biogenesis protein transmembrane region YPSIP31758_RS19775 PF11412 Disulphide bond corrector protein DsbC YPSIP31758_RS19780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPSIP31758_RS19780 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS19780 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS19785 PF13247 4Fe-4S dicluster domain YPSIP31758_RS19785 PF12800 4Fe-4S binding domain YPSIP31758_RS19790 PF13247 4Fe-4S dicluster domain YPSIP31758_RS19790 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YPSIP31758_RS19790 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS19805 PF02899 Phage integrase, N-terminal SAM-like domain YPSIP31758_RS19805 PF00589 Phage integrase family YPSIP31758_RS19835 PF03527 RHS protein YPSIP31758_RS19835 PF05593 RHS Repeat YPSIP31758_RS19850 PF05593 RHS Repeat YPSIP31758_RS19850 PF03527 RHS protein YPSIP31758_RS19890 PF13166 AAA domain YPSIP31758_RS20000 PF04754 Putative transposase, YhgA-like YPSIP31758_RS20005 PF04917 Bacterial shufflon protein, N-terminal constant region YPSIP31758_RS20025 PF00437 Type II/IV secretion system protein YPSIP31758_RS20100 PF00772 DnaB-like helicase N terminal domain YPSIP31758_RS20100 PF03796 DnaB-like helicase C terminal domain YPSIP31758_RS20130 PF06379 L-rhamnose-proton symport protein (RhaT) YPSIP31758_RS20135 PF02311 AraC-like ligand binding domain YPSIP31758_RS20135 PF12833 Helix-turn-helix domain YPSIP31758_RS20140 PF12833 Helix-turn-helix domain YPSIP31758_RS20140 PF02311 AraC-like ligand binding domain YPSIP31758_RS20155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS20155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS20160 PF06134 L-rhamnose isomerase (RhaA) YPSIP31758_RS20165 PF00596 Class II Aldolase and Adducin N-terminal domain YPSIP31758_RS20170 PF00465 Iron-containing alcohol dehydrogenase YPSIP31758_RS20175 PF05336 L-rhamnose mutarotase YPSIP31758_RS20180 PF00436 Single-strand binding protein family YPSIP31758_RS20185 PF00005 ABC transporter YPSIP31758_RS20185 PF17760 UvrA interaction domain YPSIP31758_RS20185 PF17755 UvrA DNA-binding domain YPSIP31758_RS20190 PF04237 YjbR YPSIP31758_RS20195 PF00155 Aminotransferase class I and II YPSIP31758_RS20200 PF01168 Alanine racemase, N-terminal domain YPSIP31758_RS20200 PF00842 Alanine racemase, C-terminal domain YPSIP31758_RS20205 PF03796 DnaB-like helicase C terminal domain YPSIP31758_RS20205 PF00772 DnaB-like helicase N terminal domain YPSIP31758_RS20210 PF00107 Zinc-binding dehydrogenase YPSIP31758_RS20210 PF08240 Alcohol dehydrogenase GroES-like domain YPSIP31758_RS20215 PF09583 Phage shock protein G (Phageshock_PspG) YPSIP31758_RS20220 PF01207 Dihydrouridine synthase (Dus) YPSIP31758_RS20225 PF01475 Ferric uptake regulator family YPSIP31758_RS20230 PF00717 Peptidase S24-like YPSIP31758_RS20230 PF01726 LexA DNA binding domain YPSIP31758_RS20235 PF01219 Prokaryotic diacylglycerol kinase YPSIP31758_RS20240 PF01553 Acyltransferase YPSIP31758_RS20245 PF01040 UbiA prenyltransferase family YPSIP31758_RS20250 PF04345 Chorismate lyase YPSIP31758_RS20255 PF12951 Passenger-associated-transport-repeat YPSIP31758_RS20260 PF01565 FAD binding domain YPSIP31758_RS20260 PF08031 Berberine and berberine like YPSIP31758_RS20280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS20285 PF13953 PapC C-terminal domain YPSIP31758_RS20285 PF13954 PapC N-terminal domain YPSIP31758_RS20285 PF00577 Outer membrane usher protein YPSIP31758_RS20295 PF02342 TerD domain YPSIP31758_RS20300 PF02342 TerD domain YPSIP31758_RS20305 PF03741 Integral membrane protein TerC family YPSIP31758_RS20310 PF05099 Tellurite resistance protein TerB YPSIP31758_RS20315 PF02342 TerD domain YPSIP31758_RS20320 PF02342 TerD domain YPSIP31758_RS20340 PF11202 Phosphoribosyl transferase (PRTase) YPSIP31758_RS20340 PF15608 PELOTA RNA binding domain YPSIP31758_RS20360 PF04055 Radical SAM superfamily YPSIP31758_RS20365 PF06228 Haem utilisation ChuX/HutX YPSIP31758_RS20370 PF13460 NAD(P)H-binding YPSIP31758_RS20380 PF00593 TonB dependent receptor YPSIP31758_RS20380 PF07715 TonB-dependent Receptor Plug Domain YPSIP31758_RS20385 PF05171 Haemin-degrading HemS.ChuX domain YPSIP31758_RS20390 PF01497 Periplasmic binding protein YPSIP31758_RS20395 PF01032 FecCD transport family YPSIP31758_RS20400 PF00005 ABC transporter YPSIP31758_RS20405 PF01053 Cys/Met metabolism PLP-dependent enzyme YPSIP31758_RS20410 PF03222 Tryptophan/tyrosine permease family YPSIP31758_RS20415 PF03466 LysR substrate binding domain YPSIP31758_RS20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPSIP31758_RS20420 PF01206 Sulfurtransferase TusA YPSIP31758_RS20425 PF04143 Sulphur transport YPSIP31758_RS20430 PF01312 FlhB HrpN YscU SpaS Family YPSIP31758_RS20435 PF01311 Bacterial export proteins, family 1 YPSIP31758_RS20440 PF01313 Bacterial export proteins, family 3 YPSIP31758_RS20445 PF00813 FliP family YPSIP31758_RS20465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPSIP31758_RS20465 PF18269 T3SS EscN ATPase C-terminal domain YPSIP31758_RS20470 PF00771 FHIPEP family YPSIP31758_RS20485 PF01514 Secretory protein of YscJ/FliF family YPSIP31758_RS20505 PF12833 Helix-turn-helix domain YPSIP31758_RS20505 PF14525 AraC-binding-like domain YPSIP31758_RS20520 PF03958 Bacterial type II/III secretion system short domain YPSIP31758_RS20520 PF00263 Bacterial type II and III secretion system protein YPSIP31758_RS20525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YPSIP31758_RS20525 PF00672 HAMP domain YPSIP31758_RS20525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS20525 PF00072 Response regulator receiver domain YPSIP31758_RS20525 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS20525 PF01627 Hpt domain YPSIP31758_RS20530 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS20530 PF00072 Response regulator receiver domain YPSIP31758_RS20535 PF00375 Sodium:dicarboxylate symporter family YPSIP31758_RS20540 PF13193 AMP-binding enzyme C-terminal domain YPSIP31758_RS20540 PF00501 AMP-binding enzyme YPSIP31758_RS20540 PF16177 Acetyl-coenzyme A synthetase N-terminus YPSIP31758_RS20545 PF04341 Protein of unknown function, DUF485 YPSIP31758_RS20550 PF00474 Sodium:solute symporter family YPSIP31758_RS20590 PF02142 MGS-like domain YPSIP31758_RS20590 PF01808 AICARFT/IMPCHase bienzyme YPSIP31758_RS20595 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPSIP31758_RS20595 PF02844 Phosphoribosylglycinamide synthetase, N domain YPSIP31758_RS20595 PF02843 Phosphoribosylglycinamide synthetase, C domain YPSIP31758_RS20600 PF07356 Protein of unknown function (DUF1481) YPSIP31758_RS20605 PF00216 Bacterial DNA-binding protein YPSIP31758_RS20610 PF04222 Protein of unknown function (DUF416) YPSIP31758_RS20615 PF04493 Endonuclease V YPSIP31758_RS20620 PF01208 Uroporphyrinogen decarboxylase (URO-D) YPSIP31758_RS20630 PF00293 NUDIX domain YPSIP31758_RS20630 PF09297 NADH pyrophosphatase zinc ribbon domain YPSIP31758_RS20635 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPSIP31758_RS20645 PF13667 ThiC-associated domain YPSIP31758_RS20645 PF01964 Radical SAM ThiC family YPSIP31758_RS20650 PF02581 Thiamine monophosphate synthase YPSIP31758_RS20655 PF00899 ThiF family YPSIP31758_RS20665 PF05690 Thiazole biosynthesis protein ThiG YPSIP31758_RS20670 PF06968 Biotin and Thiamin Synthesis associated domain YPSIP31758_RS20670 PF04055 Radical SAM superfamily YPSIP31758_RS20680 PF01797 Transposase IS200 like YPSIP31758_RS20685 PF04997 RNA polymerase Rpb1, domain 1 YPSIP31758_RS20685 PF00623 RNA polymerase Rpb1, domain 2 YPSIP31758_RS20685 PF04983 RNA polymerase Rpb1, domain 3 YPSIP31758_RS20685 PF05000 RNA polymerase Rpb1, domain 4 YPSIP31758_RS20685 PF04998 RNA polymerase Rpb1, domain 5 YPSIP31758_RS20690 PF04560 RNA polymerase Rpb2, domain 7 YPSIP31758_RS20690 PF04563 RNA polymerase beta subunit YPSIP31758_RS20690 PF04561 RNA polymerase Rpb2, domain 2 YPSIP31758_RS20690 PF10385 RNA polymerase beta subunit external 1 domain YPSIP31758_RS20690 PF00562 RNA polymerase Rpb2, domain 6 YPSIP31758_RS20690 PF04565 RNA polymerase Rpb2, domain 3 YPSIP31758_RS20695 PF16320 Ribosomal protein L7/L12 dimerisation domain YPSIP31758_RS20695 PF00542 Ribosomal protein L7/L12 C-terminal domain YPSIP31758_RS20700 PF00466 Ribosomal protein L10 YPSIP31758_RS20705 PF00687 Ribosomal protein L1p/L10e family YPSIP31758_RS20710 PF00298 Ribosomal protein L11, RNA binding domain YPSIP31758_RS20710 PF03946 Ribosomal protein L11, N-terminal domain YPSIP31758_RS20715 PF00467 KOW motif YPSIP31758_RS20715 PF02357 Transcription termination factor nusG YPSIP31758_RS20720 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YPSIP31758_RS20725 PF03143 Elongation factor Tu C-terminal domain YPSIP31758_RS20725 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS20725 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS20750 PF13673 Acetyltransferase (GNAT) domain YPSIP31758_RS20755 PF01797 Transposase IS200 like YPSIP31758_RS20760 PF00485 Phosphoribulokinase / Uridine kinase family YPSIP31758_RS20765 PF08279 HTH domain YPSIP31758_RS20765 PF03099 Biotin/lipoate A/B protein ligase family YPSIP31758_RS20765 PF02237 Biotin protein ligase C terminal domain YPSIP31758_RS20770 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YPSIP31758_RS20770 PF01565 FAD binding domain YPSIP31758_RS20805 PF00132 Bacterial transferase hexapeptide (six repeats) YPSIP31758_RS20810 PF08501 Shikimate dehydrogenase substrate binding domain YPSIP31758_RS20810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YPSIP31758_RS20810 PF01488 Shikimate / quinate 5-dehydrogenase YPSIP31758_RS20815 PF01300 Telomere recombination YPSIP31758_RS20820 PF01396 Topoisomerase DNA binding C4 zinc finger YPSIP31758_RS20825 PF04361 Protein of unknown function (DUF494) YPSIP31758_RS20830 PF02481 DNA recombination-mediator protein A YPSIP31758_RS20830 PF17782 DprA winged helix domain YPSIP31758_RS20835 PF01327 Polypeptide deformylase YPSIP31758_RS20840 PF02911 Formyl transferase, C-terminal domain YPSIP31758_RS20840 PF00551 Formyl transferase YPSIP31758_RS20845 PF01189 16S rRNA methyltransferase RsmB/F YPSIP31758_RS20845 PF01029 NusB family YPSIP31758_RS20850 PF02080 TrkA-C domain YPSIP31758_RS20850 PF02254 TrkA-N domain YPSIP31758_RS20855 PF01741 Large-conductance mechanosensitive channel, MscL YPSIP31758_RS20860 PF03889 Alternative ribosome-rescue factor A YPSIP31758_RS20865 PF13411 MerR HTH family regulatory protein YPSIP31758_RS20870 PF01196 Ribosomal protein L17 YPSIP31758_RS20875 PF01000 RNA polymerase Rpb3/RpoA insert domain YPSIP31758_RS20875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YPSIP31758_RS20875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YPSIP31758_RS20880 PF01479 S4 domain YPSIP31758_RS20880 PF00163 Ribosomal protein S4/S9 N-terminal domain YPSIP31758_RS20885 PF00411 Ribosomal protein S11 YPSIP31758_RS20890 PF00416 Ribosomal protein S13/S18 YPSIP31758_RS20895 PF00444 Ribosomal protein L36 YPSIP31758_RS20900 PF00344 SecY translocase YPSIP31758_RS20905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YPSIP31758_RS20910 PF00327 Ribosomal protein L30p/L7e YPSIP31758_RS20915 PF00333 Ribosomal protein S5, N-terminal domain YPSIP31758_RS20915 PF03719 Ribosomal protein S5, C-terminal domain YPSIP31758_RS20920 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YPSIP31758_RS20925 PF00347 Ribosomal protein L6 YPSIP31758_RS20930 PF00410 Ribosomal protein S8 YPSIP31758_RS20935 PF00253 Ribosomal protein S14p/S29e YPSIP31758_RS20940 PF00673 ribosomal L5P family C-terminus YPSIP31758_RS20940 PF00281 Ribosomal protein L5 YPSIP31758_RS20945 PF00467 KOW motif YPSIP31758_RS20945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YPSIP31758_RS20950 PF00238 Ribosomal protein L14p/L23e YPSIP31758_RS20955 PF01797 Transposase IS200 like YPSIP31758_RS20960 PF00366 Ribosomal protein S17 YPSIP31758_RS20965 PF00831 Ribosomal L29 protein YPSIP31758_RS20970 PF00252 Ribosomal protein L16p/L10e YPSIP31758_RS20975 PF07650 KH domain YPSIP31758_RS20975 PF00189 Ribosomal protein S3, C-terminal domain YPSIP31758_RS20980 PF00237 Ribosomal protein L22p/L17e YPSIP31758_RS20985 PF00203 Ribosomal protein S19 YPSIP31758_RS20990 PF03947 Ribosomal Proteins L2, C-terminal domain YPSIP31758_RS20990 PF00181 Ribosomal Proteins L2, RNA binding domain YPSIP31758_RS20995 PF00276 Ribosomal protein L23 YPSIP31758_RS21000 PF00573 Ribosomal protein L4/L1 family YPSIP31758_RS21005 PF00297 Ribosomal protein L3 YPSIP31758_RS21010 PF00338 Ribosomal protein S10p/S20e YPSIP31758_RS21015 PF00210 Ferritin-like domain YPSIP31758_RS21020 PF04324 BFD-like [2Fe-2S] binding domain YPSIP31758_RS21025 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS21025 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS21025 PF03143 Elongation factor Tu C-terminal domain YPSIP31758_RS21030 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS21030 PF03764 Elongation factor G, domain IV YPSIP31758_RS21030 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS21030 PF14492 Elongation Factor G, domain II YPSIP31758_RS21030 PF00679 Elongation factor G C-terminus YPSIP31758_RS21035 PF00177 Ribosomal protein S7p/S5e YPSIP31758_RS21040 PF00164 Ribosomal protein S12/S23 YPSIP31758_RS21045 PF04077 DsrH like protein YPSIP31758_RS21050 PF02635 DsrE/DsrF-like family YPSIP31758_RS21055 PF02635 DsrE/DsrF-like family YPSIP31758_RS21060 PF13309 HTH domain YPSIP31758_RS21060 PF08348 YheO-like PAS domain YPSIP31758_RS21065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YPSIP31758_RS21065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPSIP31758_RS21070 PF04102 SlyX YPSIP31758_RS21075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPSIP31758_RS21080 PF09526 Probable metal-binding protein (DUF2387) YPSIP31758_RS21085 PF00999 Sodium/hydrogen exchanger family YPSIP31758_RS21085 PF02254 TrkA-N domain YPSIP31758_RS21090 PF02525 Flavodoxin-like fold YPSIP31758_RS21095 PF12848 ABC transporter YPSIP31758_RS21095 PF00005 ABC transporter YPSIP31758_RS21100 PF00535 Glycosyl transferase family 2 YPSIP31758_RS21110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YPSIP31758_RS21115 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS21120 PF00005 ABC transporter YPSIP31758_RS21125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YPSIP31758_RS21130 PF01810 LysE type translocator YPSIP31758_RS21135 PF00561 alpha/beta hydrolase fold YPSIP31758_RS21140 PF06794 Uncharacterised protein family (UPF0270) YPSIP31758_RS21145 PF00485 Phosphoribulokinase / Uridine kinase family YPSIP31758_RS21155 PF02566 OsmC-like protein YPSIP31758_RS21160 PF00027 Cyclic nucleotide-binding domain YPSIP31758_RS21160 PF13545 Crp-like helix-turn-helix domain YPSIP31758_RS21165 PF12805 FUSC-like inner membrane protein yccS YPSIP31758_RS21170 PF00202 Aminotransferase class-III YPSIP31758_RS21175 PF00117 Glutamine amidotransferase class-I YPSIP31758_RS21180 PF05872 Bacterial protein of unknown function (DUF853) YPSIP31758_RS21185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YPSIP31758_RS21190 PF02056 Family 4 glycosyl hydrolase YPSIP31758_RS21190 PF11975 Family 4 glycosyl hydrolase C-terminal domain YPSIP31758_RS21195 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS21205 PF07690 Major Facilitator Superfamily YPSIP31758_RS21210 PF07969 Amidohydrolase family YPSIP31758_RS21215 PF18267 Rubredoxin NAD+ reductase C-terminal domain YPSIP31758_RS21215 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS21215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YPSIP31758_RS21215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YPSIP31758_RS21215 PF04324 BFD-like [2Fe-2S] binding domain YPSIP31758_RS21220 PF13806 Rieske-like [2Fe-2S] domain YPSIP31758_RS21225 PF01226 Formate/nitrite transporter YPSIP31758_RS21230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YPSIP31758_RS21230 PF14824 Sirohaem biosynthesis protein central YPSIP31758_RS21230 PF10414 Sirohaem synthase dimerisation region YPSIP31758_RS21235 PF00579 tRNA synthetases class I (W and Y) YPSIP31758_RS21240 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS21245 PF00834 Ribulose-phosphate 3 epimerase family YPSIP31758_RS21250 PF02086 D12 class N6 adenine-specific DNA methyltransferase YPSIP31758_RS21255 PF05036 Sporulation related domain YPSIP31758_RS21260 PF01761 3-dehydroquinate synthase YPSIP31758_RS21265 PF01202 Shikimate kinase YPSIP31758_RS21270 PF00263 Bacterial type II and III secretion system protein YPSIP31758_RS21270 PF03958 Bacterial type II/III secretion system short domain YPSIP31758_RS21300 PF00905 Penicillin binding protein transpeptidase domain YPSIP31758_RS21300 PF17092 Penicillin-binding protein OB-like domain YPSIP31758_RS21300 PF00912 Transglycosylase YPSIP31758_RS21305 PF00293 NUDIX domain YPSIP31758_RS21315 PF07095 Intracellular growth attenuator protein IgaA YPSIP31758_RS21320 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS21325 PF01479 S4 domain YPSIP31758_RS21330 PF01430 Hsp33 protein YPSIP31758_RS21335 PF01293 Phosphoenolpyruvate carboxykinase YPSIP31758_RS21340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS21340 PF00672 HAMP domain YPSIP31758_RS21340 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS21345 PF00072 Response regulator receiver domain YPSIP31758_RS21345 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS21350 PF01272 Transcription elongation factor, GreA/GreB, C-term YPSIP31758_RS21350 PF03449 Transcription elongation factor, N-terminal YPSIP31758_RS21355 PF17674 HHH domain YPSIP31758_RS21355 PF16921 Tex protein YqgF-like domain YPSIP31758_RS21355 PF09371 Tex-like protein N-terminal domain YPSIP31758_RS21355 PF00575 S1 RNA binding domain YPSIP31758_RS21365 PF04023 FeoA domain YPSIP31758_RS21370 PF02421 Ferrous iron transport protein B YPSIP31758_RS21370 PF07664 Ferrous iron transport protein B C terminus YPSIP31758_RS21370 PF17910 FeoB cytosolic helical domain YPSIP31758_RS21370 PF07670 Nucleoside recognition YPSIP31758_RS21375 PF09012 FeoC like transcriptional regulator YPSIP31758_RS21380 PF07338 Protein of unknown function (DUF1471) YPSIP31758_RS21385 PF00561 alpha/beta hydrolase fold YPSIP31758_RS21390 PF00156 Phosphoribosyl transferase domain YPSIP31758_RS21395 PF01521 Iron-sulphur cluster biosynthesis YPSIP31758_RS21395 PF01106 NifU-like domain YPSIP31758_RS21400 PF02446 4-alpha-glucanotransferase YPSIP31758_RS21405 PF00343 Carbohydrate phosphorylase YPSIP31758_RS21410 PF17874 MalT-like TPR region YPSIP31758_RS21410 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS21415 PF00581 Rhodanese-like domain YPSIP31758_RS21420 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease YPSIP31758_RS21420 PF01694 Rhomboid family YPSIP31758_RS21425 PF00455 DeoR C terminal sensor domain YPSIP31758_RS21425 PF08220 DeoR-like helix-turn-helix domain YPSIP31758_RS21445 PF01266 FAD dependent oxidoreductase YPSIP31758_RS21445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YPSIP31758_RS21450 PF00343 Carbohydrate phosphorylase YPSIP31758_RS21455 PF00534 Glycosyl transferases group 1 YPSIP31758_RS21455 PF08323 Starch synthase catalytic domain YPSIP31758_RS21460 PF00483 Nucleotidyl transferase YPSIP31758_RS21465 PF00128 Alpha amylase, catalytic domain YPSIP31758_RS21465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YPSIP31758_RS21465 PF18390 Glycogen debranching enzyme C-terminal domain YPSIP31758_RS21470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YPSIP31758_RS21470 PF02806 Alpha amylase, C-terminal all-beta domain YPSIP31758_RS21470 PF00128 Alpha amylase, catalytic domain YPSIP31758_RS21475 PF06580 Histidine kinase YPSIP31758_RS21475 PF07694 5TMR of 5TMR-LYT YPSIP31758_RS21480 PF09134 Invasin, domain 3 YPSIP31758_RS21480 PF07979 Intimin C-type lectin domain YPSIP31758_RS21480 PF11924 Inverse autotransporter, beta-domain YPSIP31758_RS21480 PF02369 Bacterial Ig-like domain (group 1) YPSIP31758_RS21500 PF01118 Semialdehyde dehydrogenase, NAD binding domain YPSIP31758_RS21500 PF02774 Semialdehyde dehydrogenase, dimerisation domain YPSIP31758_RS21505 PF01914 MarC family integral membrane protein YPSIP31758_RS21540 PF01202 Shikimate kinase YPSIP31758_RS21545 PF02447 GntP family permease YPSIP31758_RS21550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPSIP31758_RS21550 PF00356 Bacterial regulatory proteins, lacI family YPSIP31758_RS21555 PF02678 Pirin YPSIP31758_RS21555 PF17954 Quercetinase C-terminal cupin domain YPSIP31758_RS21565 PF00072 Response regulator receiver domain YPSIP31758_RS21565 PF00486 Transcriptional regulatory protein, C terminal YPSIP31758_RS21575 PF01116 Fructose-bisphosphate aldolase class-II YPSIP31758_RS21585 PF13407 Periplasmic binding protein domain YPSIP31758_RS21590 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS21595 PF00005 ABC transporter YPSIP31758_RS21600 PF00512 His Kinase A (phospho-acceptor) domain YPSIP31758_RS21600 PF13188 PAS domain YPSIP31758_RS21600 PF08448 PAS fold YPSIP31758_RS21600 PF00072 Response regulator receiver domain YPSIP31758_RS21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS21610 PF01384 Phosphate transporter family YPSIP31758_RS21615 PF10625 Universal stress protein B (UspB) YPSIP31758_RS21620 PF00582 Universal stress protein family YPSIP31758_RS21625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YPSIP31758_RS21625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YPSIP31758_RS21630 PF08548 Peptidase M10 serralysin C terminal YPSIP31758_RS21630 PF00413 Matrixin YPSIP31758_RS21630 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) YPSIP31758_RS21635 PF04445 Putative SAM-dependent methyltransferase YPSIP31758_RS21640 PF13358 DDE superfamily endonuclease YPSIP31758_RS21640 PF13592 Winged helix-turn helix YPSIP31758_RS21670 PF01432 Peptidase family M3 YPSIP31758_RS21675 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ YPSIP31758_RS21680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPSIP31758_RS21680 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPSIP31758_RS21685 PF17853 GGDEF-like domain YPSIP31758_RS21685 PF05651 Putative sugar diacid recognition YPSIP31758_RS21685 PF13556 PucR C-terminal helix-turn-helix domain YPSIP31758_RS21690 PF02447 GntP family permease YPSIP31758_RS21695 PF02595 Glycerate kinase family YPSIP31758_RS21715 PF03631 Virulence factor BrkB YPSIP31758_RS21720 PF02611 CDP-diacylglycerol pyrophosphatase YPSIP31758_RS21725 PF05170 AsmA family YPSIP31758_RS21730 PF00563 EAL domain YPSIP31758_RS21735 PF01361 Tautomerase enzyme YPSIP31758_RS21740 PF00294 pfkB family carbohydrate kinase YPSIP31758_RS21745 PF05193 Peptidase M16 inactive domain YPSIP31758_RS21745 PF00675 Insulinase (Peptidase family M16) YPSIP31758_RS21750 PF00375 Sodium:dicarboxylate symporter family YPSIP31758_RS21760 PF06917 Periplasmic pectate lyase YPSIP31758_RS21765 PF06178 Oligogalacturonate-specific porin protein (KdgM) YPSIP31758_RS21770 PF00990 Diguanylate cyclase, GGDEF domain YPSIP31758_RS21770 PF00672 HAMP domain YPSIP31758_RS21770 PF00563 EAL domain YPSIP31758_RS21770 PF17154 Gammaproteobacterial periplasmic sensor domain YPSIP31758_RS21775 PF01270 Glycosyl hydrolases family 8 YPSIP31758_RS21780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS21780 PF00005 ABC transporter YPSIP31758_RS21785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPSIP31758_RS21785 PF00005 ABC transporter YPSIP31758_RS21790 PF12911 N-terminal TM domain of oligopeptide transport permease C YPSIP31758_RS21790 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS21795 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS21800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPSIP31758_RS21810 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPSIP31758_RS21810 PF17287 POTRA domain YPSIP31758_RS21810 PF08479 POTRA domain, ShlB-type YPSIP31758_RS21815 PF13332 Hemagglutinin repeat YPSIP31758_RS21815 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS21815 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS21815 PF05860 haemagglutination activity domain YPSIP31758_RS21825 PF07690 Major Facilitator Superfamily YPSIP31758_RS21830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS21830 PF07730 Histidine kinase YPSIP31758_RS21830 PF05231 MASE1 YPSIP31758_RS21835 PF00072 Response regulator receiver domain YPSIP31758_RS21835 PF00196 Bacterial regulatory proteins, luxR family YPSIP31758_RS21840 PF08019 Phosphoethanolamine transferase EptA/EptB YPSIP31758_RS21840 PF00884 Sulfatase YPSIP31758_RS21845 PF12146 Serine aminopeptidase, S33 YPSIP31758_RS21850 PF00324 Amino acid permease YPSIP31758_RS21855 PF00221 Aromatic amino acid lyase YPSIP31758_RS21860 PF17392 Urocanase C-terminal domain YPSIP31758_RS21860 PF17391 Urocanase N-terminal domain YPSIP31758_RS21860 PF01175 Urocanase Rossmann-like domain YPSIP31758_RS21865 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS21870 PF00156 Phosphoribosyl transferase domain YPSIP31758_RS21885 PF01497 Periplasmic binding protein YPSIP31758_RS21890 PF01032 FecCD transport family YPSIP31758_RS21895 PF01032 FecCD transport family YPSIP31758_RS21900 PF00005 ABC transporter YPSIP31758_RS21915 PF12833 Helix-turn-helix domain YPSIP31758_RS21920 PF02653 Branched-chain amino acid transport system / permease component YPSIP31758_RS21925 PF00005 ABC transporter YPSIP31758_RS21930 PF13407 Periplasmic binding protein domain YPSIP31758_RS21940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPSIP31758_RS21940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPSIP31758_RS21950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPSIP31758_RS21950 PF02753 Pili assembly chaperone PapD, C-terminal domain YPSIP31758_RS21955 PF13953 PapC C-terminal domain YPSIP31758_RS21955 PF00577 Outer membrane usher protein YPSIP31758_RS21955 PF13954 PapC N-terminal domain YPSIP31758_RS21960 PF00419 Fimbrial protein YPSIP31758_RS21965 PF01757 Acyltransferase family YPSIP31758_RS21970 PF07690 Major Facilitator Superfamily YPSIP31758_RS21990 PF01526 Tn3 transposase DDE domain YPSIP31758_RS21990 PF13700 Domain of unknown function (DUF4158) YPSIP31758_RS21995 PF00009 Elongation factor Tu GTP binding domain YPSIP31758_RS21995 PF09107 Elongation factor SelB, winged helix YPSIP31758_RS21995 PF03144 Elongation factor Tu domain 2 YPSIP31758_RS21995 PF09106 Elongation factor SelB, winged helix YPSIP31758_RS22000 PF12390 Selenocysteine synthase N terminal YPSIP31758_RS22000 PF03841 L-seryl-tRNA selenium transferase YPSIP31758_RS22005 PF04216 Protein involved in formate dehydrogenase formation YPSIP31758_RS22010 PF01292 Prokaryotic cytochrome b561 YPSIP31758_RS22015 PF13247 4Fe-4S dicluster domain YPSIP31758_RS22015 PF09163 Formate dehydrogenase N, transmembrane YPSIP31758_RS22020 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS22020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPSIP31758_RS22020 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS22025 PF01568 Molydopterin dinucleotide binding domain YPSIP31758_RS22025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPSIP31758_RS22025 PF00384 Molybdopterin oxidoreductase YPSIP31758_RS22030 PF02634 FdhD/NarQ family YPSIP31758_RS22035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YPSIP31758_RS22035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YPSIP31758_RS22040 PF00672 HAMP domain YPSIP31758_RS22040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPSIP31758_RS22040 PF02203 Tar ligand binding domain homologue YPSIP31758_RS22055 PF10928 Protein of unknown function (DUF2810) YPSIP31758_RS22060 PF05068 Mannitol repressor YPSIP31758_RS22065 PF08125 Mannitol dehydrogenase C-terminal domain YPSIP31758_RS22065 PF01232 Mannitol dehydrogenase Rossmann domain YPSIP31758_RS22070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPSIP31758_RS22070 PF02378 Phosphotransferase system, EIIC YPSIP31758_RS22070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPSIP31758_RS22075 PF11254 Protein of unknown function (DUF3053) YPSIP31758_RS22080 PF05746 DALR anticodon binding domain YPSIP31758_RS22080 PF02092 Glycyl-tRNA synthetase beta subunit YPSIP31758_RS22085 PF02091 Glycyl-tRNA synthetase alpha subunit YPSIP31758_RS22090 PF03352 Methyladenine glycosylase YPSIP31758_RS22100 PF13488 Glycine zipper YPSIP31758_RS22100 PF00691 OmpA family YPSIP31758_RS22110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPSIP31758_RS22110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPSIP31758_RS22115 PF00128 Alpha amylase, catalytic domain YPSIP31758_RS22130 PF00155 Aminotransferase class I and II YPSIP31758_RS22135 PF06826 Predicted Permease Membrane Region YPSIP31758_RS22135 PF02080 TrkA-C domain YPSIP31758_RS22140 PF00011 Hsp20/alpha crystallin family YPSIP31758_RS22145 PF00011 Hsp20/alpha crystallin family YPSIP31758_RS22150 PF07119 Protein of unknown function (DUF1375) YPSIP31758_RS22155 PF12566 Protein of unknown function (DUF3748) YPSIP31758_RS22155 PF07676 WD40-like Beta Propeller Repeat YPSIP31758_RS22160 PF07676 WD40-like Beta Propeller Repeat YPSIP31758_RS22160 PF12566 Protein of unknown function (DUF3748) YPSIP31758_RS22165 PF13291 ACT domain YPSIP31758_RS22165 PF00291 Pyridoxal-phosphate dependent enzyme YPSIP31758_RS22170 PF02423 Ornithine cyclodeaminase/mu-crystallin family YPSIP31758_RS22185 PF01751 Toprim domain YPSIP31758_RS22185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPSIP31758_RS22185 PF18053 DNA gyrase B subunit insert domain YPSIP31758_RS22185 PF00986 DNA gyrase B subunit, carboxyl terminus YPSIP31758_RS22185 PF00204 DNA gyrase B YPSIP31758_RS22190 PF02463 RecF/RecN/SMC N terminal domain YPSIP31758_RS22200 PF02768 DNA polymerase III beta subunit, C-terminal domain YPSIP31758_RS22200 PF00712 DNA polymerase III beta subunit, N-terminal domain YPSIP31758_RS22200 PF02767 DNA polymerase III beta subunit, central domain YPSIP31758_RS22205 PF08299 Bacterial dnaA protein helix-turn-helix YPSIP31758_RS22205 PF00308 Bacterial dnaA protein YPSIP31758_RS22205 PF11638 DnaA N-terminal domain YPSIP31758_RS22210 PF00468 Ribosomal protein L34 YPSIP31758_RS22215 PF00825 Ribonuclease P YPSIP31758_RS22220 PF14849 YidC periplasmic domain YPSIP31758_RS22220 PF02096 60Kd inner membrane protein YPSIP31758_RS22225 PF12631 MnmE helical domain YPSIP31758_RS22225 PF01926 50S ribosome-binding GTPase YPSIP31758_RS22225 PF10396 GTP-binding protein TrmE N-terminus YPSIP31758_RS22230 PF12241 Trans-2-enoyl-CoA reductase catalytic region YPSIP31758_RS22230 PF07055 Enoyl reductase FAD binding domain YPSIP31758_RS22230 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YPSIP31758_RS22235 PF00860 Permease family YPSIP31758_RS22240 PF13419 Haloacid dehalogenase-like hydrolase YPSIP31758_RS22245 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS22250 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS22255 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPSIP31758_RS22265 PF01895 PhoU domain YPSIP31758_RS22270 PF00005 ABC transporter YPSIP31758_RS22275 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS22280 PF00528 Binding-protein-dependent transport system inner membrane component YPSIP31758_RS22285 PF12849 PBP superfamily domain YPSIP31758_RS22290 PF01380 SIS domain YPSIP31758_RS22295 PF00132 Bacterial transferase hexapeptide (six repeats) YPSIP31758_RS22295 PF12804 MobA-like NTP transferase domain YPSIP31758_RS22300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YPSIP31758_RS22300 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain YPSIP31758_RS22305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPSIP31758_RS22305 PF02874 ATP synthase alpha/beta family, beta-barrel domain YPSIP31758_RS22310 PF00231 ATP synthase YPSIP31758_RS22315 PF00306 ATP synthase alpha/beta chain, C terminal domain YPSIP31758_RS22315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPSIP31758_RS22315 PF02874 ATP synthase alpha/beta family, beta-barrel domain YPSIP31758_RS22320 PF00213 ATP synthase delta (OSCP) subunit YPSIP31758_RS22325 PF00430 ATP synthase B/B' CF(0) YPSIP31758_RS22330 PF00137 ATP synthase subunit C YPSIP31758_RS22335 PF00119 ATP synthase A chain YPSIP31758_RS22340 PF03899 ATP synthase I chain YPSIP31758_RS22345 PF02527 rRNA small subunit methyltransferase G YPSIP31758_RS22350 PF01134 Glucose inhibited division protein A YPSIP31758_RS22350 PF13932 GidA associated domain YPSIP31758_RS22530 PF05593 RHS Repeat YPSIP31758_RS22530 PF03527 RHS protein YPSIP31758_RS22535 PF05860 haemagglutination activity domain YPSIP31758_RS22535 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS22535 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS22535 PF13332 Hemagglutinin repeat YPSIP31758_RS22540 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS22540 PF05594 Haemagluttinin repeat YPSIP31758_RS22540 PF13332 Hemagglutinin repeat YPSIP31758_RS22540 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain YPSIP31758_RS22540 PF05860 haemagglutination activity domain YPSIP31758_RS22545 PF07979 Intimin C-type lectin domain YPSIP31758_RS22545 PF11924 Inverse autotransporter, beta-domain YPSIP31758_RS22545 PF02369 Bacterial Ig-like domain (group 1) YPSIP31758_RS22545 PF09134 Invasin, domain 3 YPSIP31758_RS22550 PF03797 Autotransporter beta-domain YPSIP31758_RS22555 PF06932 Protein of unknown function (DUF1283) YPSIP31758_RS22560 PF13358 DDE superfamily endonuclease YPSIP31758_RS22560 PF13592 Winged helix-turn helix YPSIP31758_RS22565 PF13332 Hemagglutinin repeat YPSIP31758_RS22565 PF05860 haemagglutination activity domain YPSIP31758_RS22565 PF04829 Pre-toxin domain with VENN motif YPSIP31758_RS22565 PF13018 Extended Signal Peptide of Type V secretion system YPSIP31758_RS22575 PF03869 Arc-like DNA binding domain